Multiple sequence alignment - TraesCS7B01G463400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G463400 chr7B 100.000 2357 0 0 1 2357 720164016 720161660 0.000000e+00 4353.0
1 TraesCS7B01G463400 chr7B 97.101 345 10 0 2013 2357 237913226 237913570 1.210000e-162 582.0
2 TraesCS7B01G463400 chr7B 81.099 619 111 6 1 616 712071831 712072446 7.570000e-135 490.0
3 TraesCS7B01G463400 chr7B 78.299 576 106 14 46 616 750218174 750218735 1.040000e-93 353.0
4 TraesCS7B01G463400 chr7B 77.652 528 99 14 95 616 750321532 750321018 1.060000e-78 303.0
5 TraesCS7B01G463400 chr1D 96.321 1332 44 5 622 1951 60171820 60170492 0.000000e+00 2183.0
6 TraesCS7B01G463400 chr1D 95.928 1326 46 4 628 1951 205134697 205133378 0.000000e+00 2143.0
7 TraesCS7B01G463400 chr1D 95.636 1329 51 6 627 1951 247505759 247504434 0.000000e+00 2126.0
8 TraesCS7B01G463400 chr2D 96.383 1327 45 3 627 1951 73126873 73125548 0.000000e+00 2182.0
9 TraesCS7B01G463400 chr2D 95.852 1326 49 5 629 1951 621748803 621750125 0.000000e+00 2139.0
10 TraesCS7B01G463400 chr3D 96.003 1326 50 3 628 1951 584701392 584700068 0.000000e+00 2152.0
11 TraesCS7B01G463400 chr7D 95.354 1356 55 7 598 1951 497560880 497562229 0.000000e+00 2148.0
12 TraesCS7B01G463400 chr7D 84.127 252 40 0 365 616 617932201 617932452 6.510000e-61 244.0
13 TraesCS7B01G463400 chr6D 95.465 1345 53 6 610 1951 142136710 142135371 0.000000e+00 2139.0
14 TraesCS7B01G463400 chr6D 77.199 557 114 11 65 616 464432641 464432093 1.760000e-81 313.0
15 TraesCS7B01G463400 chr5D 95.701 1326 53 4 628 1951 275171748 275170425 0.000000e+00 2130.0
16 TraesCS7B01G463400 chr3B 97.384 344 9 0 2014 2357 666509098 666508755 9.390000e-164 586.0
17 TraesCS7B01G463400 chr5A 97.110 346 10 0 2012 2357 626088628 626088283 3.380000e-163 584.0
18 TraesCS7B01G463400 chr5A 96.562 349 11 1 2010 2357 364684194 364683846 5.650000e-161 577.0
19 TraesCS7B01G463400 chr4B 96.821 346 11 0 2012 2357 104566603 104566258 1.570000e-161 579.0
20 TraesCS7B01G463400 chr4B 95.442 351 15 1 2008 2357 416116011 416116361 2.050000e-155 558.0
21 TraesCS7B01G463400 chr5B 95.965 347 13 1 2012 2357 631461308 631460962 1.580000e-156 562.0
22 TraesCS7B01G463400 chr2A 96.221 344 11 1 2014 2357 133478268 133477927 1.580000e-156 562.0
23 TraesCS7B01G463400 chr2A 76.718 524 99 14 55 571 77336170 77336677 1.070000e-68 270.0
24 TraesCS7B01G463400 chr2A 81.509 265 47 2 353 616 716477383 716477646 1.420000e-52 217.0
25 TraesCS7B01G463400 chrUn 93.491 338 21 1 2019 2355 50926323 50925986 3.500000e-138 501.0
26 TraesCS7B01G463400 chr6B 77.104 594 121 11 29 616 708126382 708125798 1.750000e-86 329.0
27 TraesCS7B01G463400 chr6B 85.484 62 5 3 1955 2014 708125803 708125744 7.030000e-06 62.1
28 TraesCS7B01G463400 chr7A 76.689 592 119 15 30 616 733274511 733275088 6.330000e-81 311.0
29 TraesCS7B01G463400 chr7A 76.298 578 118 17 44 616 732804866 732804303 8.240000e-75 291.0
30 TraesCS7B01G463400 chr2B 76.190 567 116 11 55 616 118323555 118324107 4.960000e-72 281.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G463400 chr7B 720161660 720164016 2356 True 4353 4353 100.000 1 2357 1 chr7B.!!$R1 2356
1 TraesCS7B01G463400 chr7B 712071831 712072446 615 False 490 490 81.099 1 616 1 chr7B.!!$F2 615
2 TraesCS7B01G463400 chr7B 750218174 750218735 561 False 353 353 78.299 46 616 1 chr7B.!!$F3 570
3 TraesCS7B01G463400 chr7B 750321018 750321532 514 True 303 303 77.652 95 616 1 chr7B.!!$R2 521
4 TraesCS7B01G463400 chr1D 60170492 60171820 1328 True 2183 2183 96.321 622 1951 1 chr1D.!!$R1 1329
5 TraesCS7B01G463400 chr1D 205133378 205134697 1319 True 2143 2143 95.928 628 1951 1 chr1D.!!$R2 1323
6 TraesCS7B01G463400 chr1D 247504434 247505759 1325 True 2126 2126 95.636 627 1951 1 chr1D.!!$R3 1324
7 TraesCS7B01G463400 chr2D 73125548 73126873 1325 True 2182 2182 96.383 627 1951 1 chr2D.!!$R1 1324
8 TraesCS7B01G463400 chr2D 621748803 621750125 1322 False 2139 2139 95.852 629 1951 1 chr2D.!!$F1 1322
9 TraesCS7B01G463400 chr3D 584700068 584701392 1324 True 2152 2152 96.003 628 1951 1 chr3D.!!$R1 1323
10 TraesCS7B01G463400 chr7D 497560880 497562229 1349 False 2148 2148 95.354 598 1951 1 chr7D.!!$F1 1353
11 TraesCS7B01G463400 chr6D 142135371 142136710 1339 True 2139 2139 95.465 610 1951 1 chr6D.!!$R1 1341
12 TraesCS7B01G463400 chr6D 464432093 464432641 548 True 313 313 77.199 65 616 1 chr6D.!!$R2 551
13 TraesCS7B01G463400 chr5D 275170425 275171748 1323 True 2130 2130 95.701 628 1951 1 chr5D.!!$R1 1323
14 TraesCS7B01G463400 chr2A 77336170 77336677 507 False 270 270 76.718 55 571 1 chr2A.!!$F1 516
15 TraesCS7B01G463400 chr7A 733274511 733275088 577 False 311 311 76.689 30 616 1 chr7A.!!$F1 586
16 TraesCS7B01G463400 chr7A 732804303 732804866 563 True 291 291 76.298 44 616 1 chr7A.!!$R1 572
17 TraesCS7B01G463400 chr2B 118323555 118324107 552 False 281 281 76.190 55 616 1 chr2B.!!$F1 561

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
268 272 0.250124 CACGGTTGCTTGGGTGACTA 60.25 55.0 0.0 0.0 32.23 2.59 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2221 2365 0.037232 GGAAGTGTGGTCTTCGGAGG 60.037 60.0 0.0 0.0 43.1 4.3 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 7.564793 ACATTGATTTGGATAGTACTGCTGTA 58.435 34.615 5.39 0.00 0.00 2.74
33 34 6.599356 TTGGATAGTACTGCTGTAGTTGAA 57.401 37.500 15.30 0.00 40.89 2.69
38 39 5.730296 AGTACTGCTGTAGTTGAAGATGT 57.270 39.130 3.17 0.00 40.89 3.06
41 42 5.468540 ACTGCTGTAGTTGAAGATGTGTA 57.531 39.130 0.00 0.00 35.67 2.90
141 142 8.882415 AAGAAATAGTCGACAAGTTAGTTGAA 57.118 30.769 19.50 0.00 38.60 2.69
145 146 5.405331 AGTCGACAAGTTAGTTGAAAAGC 57.595 39.130 19.50 0.00 38.60 3.51
149 150 5.234329 TCGACAAGTTAGTTGAAAAGCAGAG 59.766 40.000 6.80 0.00 38.60 3.35
207 211 1.737363 GCCGGAAAAACAACACTTGCA 60.737 47.619 5.05 0.00 0.00 4.08
231 235 7.064016 GCAAGAAAAGTCTACACTTCATCTAGG 59.936 40.741 0.00 0.13 42.45 3.02
240 244 5.413309 ACACTTCATCTAGGGTCAAAGAG 57.587 43.478 0.00 0.00 0.00 2.85
268 272 0.250124 CACGGTTGCTTGGGTGACTA 60.250 55.000 0.00 0.00 32.23 2.59
284 288 6.096987 TGGGTGACTATATCTCAGAAGTTCAC 59.903 42.308 5.50 0.00 0.00 3.18
285 289 6.461788 GGGTGACTATATCTCAGAAGTTCACC 60.462 46.154 5.50 12.68 38.29 4.02
306 310 4.638865 ACCGGCATTGATTTACTAAAGGAC 59.361 41.667 0.00 0.00 0.00 3.85
309 313 6.430451 CGGCATTGATTTACTAAAGGACATC 58.570 40.000 0.00 0.00 0.00 3.06
313 317 7.380602 GCATTGATTTACTAAAGGACATCATGC 59.619 37.037 8.60 8.60 0.00 4.06
324 328 4.122776 AGGACATCATGCGACAAATAGTC 58.877 43.478 0.00 0.00 44.02 2.59
339 343 0.755698 TAGTCAGGGGCGGAGATGAC 60.756 60.000 0.00 0.00 41.86 3.06
340 344 2.038813 TCAGGGGCGGAGATGACA 59.961 61.111 0.00 0.00 0.00 3.58
342 346 3.083997 AGGGGCGGAGATGACACC 61.084 66.667 0.00 0.00 0.00 4.16
344 348 2.187946 GGGCGGAGATGACACCAG 59.812 66.667 0.00 0.00 0.00 4.00
346 350 1.142748 GGCGGAGATGACACCAGAG 59.857 63.158 0.00 0.00 0.00 3.35
348 352 0.532573 GCGGAGATGACACCAGAGAA 59.467 55.000 0.00 0.00 0.00 2.87
349 353 1.066858 GCGGAGATGACACCAGAGAAA 60.067 52.381 0.00 0.00 0.00 2.52
350 354 2.419297 GCGGAGATGACACCAGAGAAAT 60.419 50.000 0.00 0.00 0.00 2.17
351 355 3.452474 CGGAGATGACACCAGAGAAATC 58.548 50.000 0.00 0.00 0.00 2.17
358 362 4.498241 TGACACCAGAGAAATCGATCAAG 58.502 43.478 0.00 0.00 0.00 3.02
359 363 3.265791 ACACCAGAGAAATCGATCAAGC 58.734 45.455 0.00 0.00 0.00 4.01
362 366 4.033817 CACCAGAGAAATCGATCAAGCTTC 59.966 45.833 0.00 0.00 0.00 3.86
370 374 7.946207 AGAAATCGATCAAGCTTCAGAGTATA 58.054 34.615 0.00 0.00 0.00 1.47
378 382 3.041946 AGCTTCAGAGTATAAGGTGGGG 58.958 50.000 0.00 0.00 32.49 4.96
381 385 4.080526 GCTTCAGAGTATAAGGTGGGGAAA 60.081 45.833 0.00 0.00 0.00 3.13
389 393 2.215942 AAGGTGGGGAAAAAGATCCG 57.784 50.000 0.00 0.00 40.62 4.18
390 394 0.331616 AGGTGGGGAAAAAGATCCGG 59.668 55.000 0.00 0.00 40.62 5.14
402 406 7.002276 GGAAAAAGATCCGGGATTTCCTATTA 58.998 38.462 23.54 0.00 43.54 0.98
405 409 6.704056 AAGATCCGGGATTTCCTATTACAT 57.296 37.500 11.57 0.00 35.95 2.29
479 483 8.914011 GGAGCAAATAAATAGAATGGTTAAGGT 58.086 33.333 0.00 0.00 0.00 3.50
491 495 5.779241 ATGGTTAAGGTCTTTCCAGATGA 57.221 39.130 10.93 0.00 39.02 2.92
498 502 5.505181 AGGTCTTTCCAGATGAAGCTAAA 57.495 39.130 0.00 0.00 39.02 1.85
501 505 4.095632 GTCTTTCCAGATGAAGCTAAAGGC 59.904 45.833 0.00 0.00 42.19 4.35
528 532 8.612233 GTAGAATACTACTAACCACACGAAAG 57.388 38.462 0.00 0.00 43.80 2.62
541 545 2.948979 ACACGAAAGGAAGATGTTGCAA 59.051 40.909 0.00 0.00 0.00 4.08
542 546 3.380004 ACACGAAAGGAAGATGTTGCAAA 59.620 39.130 0.00 0.00 0.00 3.68
543 547 4.037923 ACACGAAAGGAAGATGTTGCAAAT 59.962 37.500 0.00 0.00 0.00 2.32
544 548 4.618489 CACGAAAGGAAGATGTTGCAAATC 59.382 41.667 0.00 7.09 0.00 2.17
545 549 4.278170 ACGAAAGGAAGATGTTGCAAATCA 59.722 37.500 17.89 7.97 0.00 2.57
546 550 5.047802 ACGAAAGGAAGATGTTGCAAATCAT 60.048 36.000 17.89 11.75 0.00 2.45
547 551 6.150976 ACGAAAGGAAGATGTTGCAAATCATA 59.849 34.615 17.89 0.00 0.00 2.15
548 552 7.148018 ACGAAAGGAAGATGTTGCAAATCATAT 60.148 33.333 17.89 7.57 0.00 1.78
549 553 7.703621 CGAAAGGAAGATGTTGCAAATCATATT 59.296 33.333 17.89 13.98 0.00 1.28
550 554 8.937634 AAAGGAAGATGTTGCAAATCATATTC 57.062 30.769 20.72 20.72 39.80 1.75
554 558 8.882415 GAAGATGTTGCAAATCATATTCCAAT 57.118 30.769 19.23 0.00 36.74 3.16
555 559 8.657074 AAGATGTTGCAAATCATATTCCAATG 57.343 30.769 17.89 0.00 0.00 2.82
556 560 6.704493 AGATGTTGCAAATCATATTCCAATGC 59.296 34.615 17.89 0.00 0.00 3.56
557 561 5.117584 TGTTGCAAATCATATTCCAATGCC 58.882 37.500 0.00 0.00 0.00 4.40
558 562 3.979948 TGCAAATCATATTCCAATGCCG 58.020 40.909 0.00 0.00 0.00 5.69
559 563 3.635836 TGCAAATCATATTCCAATGCCGA 59.364 39.130 0.00 0.00 0.00 5.54
560 564 3.983344 GCAAATCATATTCCAATGCCGAC 59.017 43.478 0.00 0.00 0.00 4.79
561 565 4.221342 CAAATCATATTCCAATGCCGACG 58.779 43.478 0.00 0.00 0.00 5.12
562 566 1.225855 TCATATTCCAATGCCGACGC 58.774 50.000 0.00 0.00 0.00 5.19
571 575 3.176661 TGCCGACGCATGTTCATG 58.823 55.556 8.26 8.26 41.12 3.07
572 576 2.277501 GCCGACGCATGTTCATGC 60.278 61.111 22.88 22.88 43.72 4.06
573 577 2.753966 GCCGACGCATGTTCATGCT 61.754 57.895 27.40 17.92 44.90 3.79
574 578 1.349627 CCGACGCATGTTCATGCTC 59.650 57.895 27.40 22.25 44.90 4.26
575 579 1.086067 CCGACGCATGTTCATGCTCT 61.086 55.000 27.40 16.54 44.90 4.09
576 580 0.723414 CGACGCATGTTCATGCTCTT 59.277 50.000 27.40 15.93 44.90 2.85
577 581 1.926510 CGACGCATGTTCATGCTCTTA 59.073 47.619 27.40 0.00 44.90 2.10
578 582 2.348362 CGACGCATGTTCATGCTCTTAA 59.652 45.455 27.40 0.00 44.90 1.85
579 583 3.542875 CGACGCATGTTCATGCTCTTAAG 60.543 47.826 27.40 16.92 44.90 1.85
594 598 5.542616 CTCTTAAGCACTTGGATGACTTG 57.457 43.478 0.00 0.00 0.00 3.16
595 599 5.227569 TCTTAAGCACTTGGATGACTTGA 57.772 39.130 0.00 0.00 0.00 3.02
596 600 5.620206 TCTTAAGCACTTGGATGACTTGAA 58.380 37.500 0.00 0.00 0.00 2.69
597 601 6.061441 TCTTAAGCACTTGGATGACTTGAAA 58.939 36.000 0.00 0.00 0.00 2.69
598 602 6.545666 TCTTAAGCACTTGGATGACTTGAAAA 59.454 34.615 0.00 0.00 0.00 2.29
615 619 7.454260 CTTGAAAAGTTGGGAGCTATTTAGT 57.546 36.000 0.00 0.00 39.70 2.24
687 691 0.469494 TGGACGATGCATACAGCCAT 59.531 50.000 0.00 0.00 44.83 4.40
894 898 0.326238 ATACCGGGACTGGGTCACAT 60.326 55.000 6.32 0.00 35.39 3.21
897 901 2.959484 CGGGACTGGGTCACATGCT 61.959 63.158 0.00 0.00 35.39 3.79
1191 1196 1.561076 CATCCACAACATCTCTCCCCA 59.439 52.381 0.00 0.00 0.00 4.96
1213 1218 1.366319 ACAGCAGTTCCTCCCAAGAT 58.634 50.000 0.00 0.00 0.00 2.40
1284 1304 4.827284 TCCAGACTGAATTTTGGACTTTCC 59.173 41.667 3.32 0.00 34.90 3.13
1634 1773 2.242926 GTCCAGATGGATCCGATCTGA 58.757 52.381 33.39 23.76 46.73 3.27
1691 1830 2.818841 CCACCACCTCACGACACA 59.181 61.111 0.00 0.00 0.00 3.72
1692 1831 1.371183 CCACCACCTCACGACACAT 59.629 57.895 0.00 0.00 0.00 3.21
1737 1876 4.143333 CGCCGATGGAAGACCCGT 62.143 66.667 0.00 0.00 37.93 5.28
1763 1902 4.303993 CCGTCGGACCCCACGTTT 62.304 66.667 4.91 0.00 34.06 3.60
1899 2040 1.311371 AGGAGGGGGAGAGGAGGAT 60.311 63.158 0.00 0.00 0.00 3.24
1917 2061 3.878519 GAGACTCGAGGGGCGTCG 61.879 72.222 18.41 1.72 41.80 5.12
1929 2073 2.104859 GGCGTCGGCTAGGGTTTTC 61.105 63.158 12.17 0.00 39.81 2.29
1961 2105 3.206090 CCGCGGGGCTATTTAGTAC 57.794 57.895 20.10 0.00 0.00 2.73
1962 2106 0.320160 CCGCGGGGCTATTTAGTACC 60.320 60.000 20.10 0.00 0.00 3.34
1963 2107 0.390124 CGCGGGGCTATTTAGTACCA 59.610 55.000 0.00 0.00 0.00 3.25
1964 2108 1.202557 CGCGGGGCTATTTAGTACCAA 60.203 52.381 0.00 0.00 0.00 3.67
1965 2109 2.742530 CGCGGGGCTATTTAGTACCAAA 60.743 50.000 0.00 0.00 0.00 3.28
1966 2110 2.876550 GCGGGGCTATTTAGTACCAAAG 59.123 50.000 0.00 0.00 0.00 2.77
1967 2111 2.876550 CGGGGCTATTTAGTACCAAAGC 59.123 50.000 0.00 0.00 0.00 3.51
1968 2112 3.433173 CGGGGCTATTTAGTACCAAAGCT 60.433 47.826 0.00 0.00 0.00 3.74
1969 2113 4.533815 GGGGCTATTTAGTACCAAAGCTT 58.466 43.478 0.00 0.00 0.00 3.74
1970 2114 4.954202 GGGGCTATTTAGTACCAAAGCTTT 59.046 41.667 5.69 5.69 0.00 3.51
1971 2115 6.124340 GGGGCTATTTAGTACCAAAGCTTTA 58.876 40.000 12.25 0.00 0.00 1.85
1972 2116 6.039047 GGGGCTATTTAGTACCAAAGCTTTAC 59.961 42.308 12.25 6.94 0.00 2.01
1973 2117 6.039047 GGGCTATTTAGTACCAAAGCTTTACC 59.961 42.308 12.25 0.07 0.00 2.85
1974 2118 6.600427 GGCTATTTAGTACCAAAGCTTTACCA 59.400 38.462 12.25 0.00 0.00 3.25
1975 2119 7.284716 GGCTATTTAGTACCAAAGCTTTACCAT 59.715 37.037 12.25 0.26 0.00 3.55
1976 2120 8.343366 GCTATTTAGTACCAAAGCTTTACCATC 58.657 37.037 12.25 2.27 0.00 3.51
1977 2121 9.391006 CTATTTAGTACCAAAGCTTTACCATCA 57.609 33.333 12.25 0.00 0.00 3.07
1978 2122 8.823220 ATTTAGTACCAAAGCTTTACCATCAT 57.177 30.769 12.25 0.00 0.00 2.45
1979 2123 9.914834 ATTTAGTACCAAAGCTTTACCATCATA 57.085 29.630 12.25 0.00 0.00 2.15
1980 2124 8.726870 TTAGTACCAAAGCTTTACCATCATAC 57.273 34.615 12.25 6.89 0.00 2.39
1981 2125 6.717289 AGTACCAAAGCTTTACCATCATACA 58.283 36.000 12.25 0.00 0.00 2.29
1982 2126 6.823689 AGTACCAAAGCTTTACCATCATACAG 59.176 38.462 12.25 0.00 0.00 2.74
1983 2127 5.815581 ACCAAAGCTTTACCATCATACAGA 58.184 37.500 12.25 0.00 0.00 3.41
1984 2128 6.245408 ACCAAAGCTTTACCATCATACAGAA 58.755 36.000 12.25 0.00 0.00 3.02
1985 2129 6.375455 ACCAAAGCTTTACCATCATACAGAAG 59.625 38.462 12.25 0.00 0.00 2.85
1986 2130 6.599244 CCAAAGCTTTACCATCATACAGAAGA 59.401 38.462 12.25 0.00 0.00 2.87
1987 2131 7.284034 CCAAAGCTTTACCATCATACAGAAGAT 59.716 37.037 12.25 0.00 0.00 2.40
1988 2132 8.341173 CAAAGCTTTACCATCATACAGAAGATC 58.659 37.037 12.25 0.00 0.00 2.75
1989 2133 7.372260 AGCTTTACCATCATACAGAAGATCT 57.628 36.000 0.00 0.00 0.00 2.75
1990 2134 8.484214 AGCTTTACCATCATACAGAAGATCTA 57.516 34.615 0.00 0.00 0.00 1.98
1991 2135 9.099071 AGCTTTACCATCATACAGAAGATCTAT 57.901 33.333 0.00 0.00 0.00 1.98
1992 2136 9.364989 GCTTTACCATCATACAGAAGATCTATC 57.635 37.037 0.00 0.00 0.00 2.08
1995 2139 7.846101 ACCATCATACAGAAGATCTATCACA 57.154 36.000 0.00 0.00 0.00 3.58
1996 2140 7.665690 ACCATCATACAGAAGATCTATCACAC 58.334 38.462 0.00 0.00 0.00 3.82
1997 2141 6.805760 CCATCATACAGAAGATCTATCACACG 59.194 42.308 0.00 0.00 0.00 4.49
1998 2142 6.944234 TCATACAGAAGATCTATCACACGT 57.056 37.500 0.00 0.00 0.00 4.49
1999 2143 6.729187 TCATACAGAAGATCTATCACACGTG 58.271 40.000 15.48 15.48 0.00 4.49
2000 2144 6.542370 TCATACAGAAGATCTATCACACGTGA 59.458 38.462 25.01 0.00 44.59 4.35
2001 2145 4.987832 ACAGAAGATCTATCACACGTGAC 58.012 43.478 25.01 3.00 43.11 3.67
2002 2146 4.459337 ACAGAAGATCTATCACACGTGACA 59.541 41.667 25.01 8.21 43.11 3.58
2003 2147 5.126222 ACAGAAGATCTATCACACGTGACAT 59.874 40.000 25.01 15.24 43.11 3.06
2004 2148 5.458126 CAGAAGATCTATCACACGTGACATG 59.542 44.000 25.01 10.68 43.11 3.21
2005 2149 4.313277 AGATCTATCACACGTGACATGG 57.687 45.455 25.01 14.65 43.11 3.66
2006 2150 3.954258 AGATCTATCACACGTGACATGGA 59.046 43.478 25.01 19.22 43.11 3.41
2007 2151 4.586421 AGATCTATCACACGTGACATGGAT 59.414 41.667 25.01 22.65 43.11 3.41
2008 2152 4.045636 TCTATCACACGTGACATGGATG 57.954 45.455 25.01 8.23 43.11 3.51
2009 2153 2.768253 ATCACACGTGACATGGATGT 57.232 45.000 25.01 0.00 43.11 3.06
2010 2154 1.794512 TCACACGTGACATGGATGTG 58.205 50.000 25.01 14.61 41.95 3.21
2011 2155 1.069978 TCACACGTGACATGGATGTGT 59.930 47.619 25.01 15.64 42.96 3.72
2012 2156 1.872952 CACACGTGACATGGATGTGTT 59.127 47.619 25.01 0.00 40.77 3.32
2013 2157 2.290367 CACACGTGACATGGATGTGTTT 59.710 45.455 25.01 0.00 40.77 2.83
2014 2158 2.948979 ACACGTGACATGGATGTGTTTT 59.051 40.909 25.01 0.00 39.97 2.43
2015 2159 3.380004 ACACGTGACATGGATGTGTTTTT 59.620 39.130 25.01 0.00 39.97 1.94
2035 2179 3.498927 TTTTTCGAGAGTACGCCTAGG 57.501 47.619 3.67 3.67 0.00 3.02
2036 2180 0.737219 TTTCGAGAGTACGCCTAGGC 59.263 55.000 24.75 24.75 37.85 3.93
2046 2190 4.990288 GCCTAGGCGTACCATAGC 57.010 61.111 20.16 0.00 39.06 2.97
2047 2191 2.352817 GCCTAGGCGTACCATAGCT 58.647 57.895 20.16 0.00 39.06 3.32
2048 2192 0.680061 GCCTAGGCGTACCATAGCTT 59.320 55.000 20.16 0.00 39.06 3.74
2049 2193 1.070289 GCCTAGGCGTACCATAGCTTT 59.930 52.381 20.16 0.00 39.06 3.51
2050 2194 2.298163 GCCTAGGCGTACCATAGCTTTA 59.702 50.000 20.16 0.00 39.06 1.85
2051 2195 3.056035 GCCTAGGCGTACCATAGCTTTAT 60.056 47.826 20.16 0.00 39.06 1.40
2052 2196 4.159135 GCCTAGGCGTACCATAGCTTTATA 59.841 45.833 20.16 0.00 39.06 0.98
2053 2197 5.679127 GCCTAGGCGTACCATAGCTTTATAG 60.679 48.000 20.16 0.00 39.06 1.31
2054 2198 5.651139 CCTAGGCGTACCATAGCTTTATAGA 59.349 44.000 0.00 0.00 39.06 1.98
2055 2199 6.152323 CCTAGGCGTACCATAGCTTTATAGAA 59.848 42.308 0.00 0.00 39.06 2.10
2056 2200 6.026947 AGGCGTACCATAGCTTTATAGAAG 57.973 41.667 0.00 0.00 39.06 2.85
2057 2201 5.047235 AGGCGTACCATAGCTTTATAGAAGG 60.047 44.000 0.00 0.00 39.06 3.46
2058 2202 4.626172 GCGTACCATAGCTTTATAGAAGGC 59.374 45.833 0.00 0.00 37.92 4.35
2059 2203 5.779922 CGTACCATAGCTTTATAGAAGGCA 58.220 41.667 6.98 0.00 40.04 4.75
2060 2204 5.864474 CGTACCATAGCTTTATAGAAGGCAG 59.136 44.000 6.98 0.00 40.04 4.85
2061 2205 6.294564 CGTACCATAGCTTTATAGAAGGCAGA 60.295 42.308 6.98 0.00 40.04 4.26
2062 2206 6.500589 ACCATAGCTTTATAGAAGGCAGAA 57.499 37.500 6.98 0.00 40.04 3.02
2063 2207 7.084268 ACCATAGCTTTATAGAAGGCAGAAT 57.916 36.000 6.98 0.00 40.04 2.40
2064 2208 7.521669 ACCATAGCTTTATAGAAGGCAGAATT 58.478 34.615 6.98 0.00 40.04 2.17
2065 2209 8.001292 ACCATAGCTTTATAGAAGGCAGAATTT 58.999 33.333 6.98 0.00 40.04 1.82
2066 2210 9.507329 CCATAGCTTTATAGAAGGCAGAATTTA 57.493 33.333 6.98 0.00 40.04 1.40
2076 2220 9.959721 ATAGAAGGCAGAATTTAGTTACAAGAA 57.040 29.630 0.00 0.00 0.00 2.52
2077 2221 8.691661 AGAAGGCAGAATTTAGTTACAAGAAA 57.308 30.769 0.00 0.00 0.00 2.52
2078 2222 8.787852 AGAAGGCAGAATTTAGTTACAAGAAAG 58.212 33.333 0.00 0.00 0.00 2.62
2079 2223 8.465273 AAGGCAGAATTTAGTTACAAGAAAGT 57.535 30.769 0.00 0.00 0.00 2.66
2080 2224 8.465273 AGGCAGAATTTAGTTACAAGAAAGTT 57.535 30.769 0.00 0.00 0.00 2.66
2081 2225 9.569122 AGGCAGAATTTAGTTACAAGAAAGTTA 57.431 29.630 0.00 0.00 0.00 2.24
2082 2226 9.608617 GGCAGAATTTAGTTACAAGAAAGTTAC 57.391 33.333 0.00 0.00 0.00 2.50
2083 2227 9.608617 GCAGAATTTAGTTACAAGAAAGTTACC 57.391 33.333 0.00 0.00 0.00 2.85
2084 2228 9.807386 CAGAATTTAGTTACAAGAAAGTTACCG 57.193 33.333 0.00 0.00 0.00 4.02
2085 2229 8.501580 AGAATTTAGTTACAAGAAAGTTACCGC 58.498 33.333 0.00 0.00 0.00 5.68
2086 2230 7.974482 ATTTAGTTACAAGAAAGTTACCGCT 57.026 32.000 0.00 0.00 0.00 5.52
2087 2231 7.412137 TTTAGTTACAAGAAAGTTACCGCTC 57.588 36.000 0.00 0.00 0.00 5.03
2088 2232 3.985925 AGTTACAAGAAAGTTACCGCTCG 59.014 43.478 0.00 0.00 0.00 5.03
2089 2233 2.806608 ACAAGAAAGTTACCGCTCGA 57.193 45.000 0.00 0.00 0.00 4.04
2090 2234 3.314541 ACAAGAAAGTTACCGCTCGAT 57.685 42.857 0.00 0.00 0.00 3.59
2091 2235 2.993899 ACAAGAAAGTTACCGCTCGATG 59.006 45.455 0.00 0.00 0.00 3.84
2092 2236 1.641577 AGAAAGTTACCGCTCGATGC 58.358 50.000 0.00 0.00 38.57 3.91
2103 2247 2.202610 TCGATGCGAGCAACGAGG 60.203 61.111 22.83 0.15 44.09 4.63
2104 2248 3.257561 CGATGCGAGCAACGAGGG 61.258 66.667 20.33 0.00 43.33 4.30
2105 2249 3.567797 GATGCGAGCAACGAGGGC 61.568 66.667 0.57 0.00 45.77 5.19
2106 2250 4.393155 ATGCGAGCAACGAGGGCA 62.393 61.111 0.57 0.00 45.77 5.36
2110 2254 2.437359 GAGCAACGAGGGCAGCAT 60.437 61.111 0.00 0.00 0.00 3.79
2111 2255 2.749044 AGCAACGAGGGCAGCATG 60.749 61.111 0.00 0.00 40.87 4.06
2112 2256 2.747460 GCAACGAGGGCAGCATGA 60.747 61.111 0.00 0.00 39.69 3.07
2113 2257 2.334946 GCAACGAGGGCAGCATGAA 61.335 57.895 0.00 0.00 39.69 2.57
2114 2258 1.503542 CAACGAGGGCAGCATGAAC 59.496 57.895 0.00 0.00 39.69 3.18
2115 2259 1.073025 AACGAGGGCAGCATGAACA 59.927 52.632 0.00 0.00 39.69 3.18
2116 2260 1.237285 AACGAGGGCAGCATGAACAC 61.237 55.000 0.00 0.00 39.69 3.32
2117 2261 2.401766 CGAGGGCAGCATGAACACC 61.402 63.158 0.00 0.00 39.69 4.16
2118 2262 1.303561 GAGGGCAGCATGAACACCA 60.304 57.895 0.00 0.00 39.69 4.17
2119 2263 1.589716 GAGGGCAGCATGAACACCAC 61.590 60.000 0.00 0.00 39.69 4.16
2120 2264 1.902918 GGGCAGCATGAACACCACA 60.903 57.895 0.00 0.00 39.69 4.17
2121 2265 1.286880 GGCAGCATGAACACCACAC 59.713 57.895 0.00 0.00 39.69 3.82
2122 2266 1.286880 GCAGCATGAACACCACACC 59.713 57.895 0.00 0.00 39.69 4.16
2123 2267 1.575922 CAGCATGAACACCACACCG 59.424 57.895 0.00 0.00 39.69 4.94
2124 2268 0.884259 CAGCATGAACACCACACCGA 60.884 55.000 0.00 0.00 39.69 4.69
2125 2269 0.884704 AGCATGAACACCACACCGAC 60.885 55.000 0.00 0.00 0.00 4.79
2126 2270 1.163420 GCATGAACACCACACCGACA 61.163 55.000 0.00 0.00 0.00 4.35
2127 2271 1.304254 CATGAACACCACACCGACAA 58.696 50.000 0.00 0.00 0.00 3.18
2128 2272 1.264020 CATGAACACCACACCGACAAG 59.736 52.381 0.00 0.00 0.00 3.16
2129 2273 0.537653 TGAACACCACACCGACAAGA 59.462 50.000 0.00 0.00 0.00 3.02
2130 2274 0.935196 GAACACCACACCGACAAGAC 59.065 55.000 0.00 0.00 0.00 3.01
2131 2275 0.463116 AACACCACACCGACAAGACC 60.463 55.000 0.00 0.00 0.00 3.85
2132 2276 1.145156 CACCACACCGACAAGACCA 59.855 57.895 0.00 0.00 0.00 4.02
2133 2277 1.145377 ACCACACCGACAAGACCAC 59.855 57.895 0.00 0.00 0.00 4.16
2134 2278 1.145156 CCACACCGACAAGACCACA 59.855 57.895 0.00 0.00 0.00 4.17
2135 2279 0.462937 CCACACCGACAAGACCACAA 60.463 55.000 0.00 0.00 0.00 3.33
2136 2280 1.374560 CACACCGACAAGACCACAAA 58.625 50.000 0.00 0.00 0.00 2.83
2137 2281 1.063469 CACACCGACAAGACCACAAAC 59.937 52.381 0.00 0.00 0.00 2.93
2138 2282 1.339247 ACACCGACAAGACCACAAACA 60.339 47.619 0.00 0.00 0.00 2.83
2139 2283 1.740585 CACCGACAAGACCACAAACAA 59.259 47.619 0.00 0.00 0.00 2.83
2140 2284 2.162608 CACCGACAAGACCACAAACAAA 59.837 45.455 0.00 0.00 0.00 2.83
2141 2285 2.162809 ACCGACAAGACCACAAACAAAC 59.837 45.455 0.00 0.00 0.00 2.93
2142 2286 2.162608 CCGACAAGACCACAAACAAACA 59.837 45.455 0.00 0.00 0.00 2.83
2143 2287 3.168193 CGACAAGACCACAAACAAACAC 58.832 45.455 0.00 0.00 0.00 3.32
2144 2288 3.507786 GACAAGACCACAAACAAACACC 58.492 45.455 0.00 0.00 0.00 4.16
2145 2289 2.894126 ACAAGACCACAAACAAACACCA 59.106 40.909 0.00 0.00 0.00 4.17
2146 2290 3.249917 CAAGACCACAAACAAACACCAC 58.750 45.455 0.00 0.00 0.00 4.16
2147 2291 1.822371 AGACCACAAACAAACACCACC 59.178 47.619 0.00 0.00 0.00 4.61
2148 2292 0.528470 ACCACAAACAAACACCACCG 59.472 50.000 0.00 0.00 0.00 4.94
2149 2293 0.804156 CCACAAACAAACACCACCGC 60.804 55.000 0.00 0.00 0.00 5.68
2150 2294 0.172352 CACAAACAAACACCACCGCT 59.828 50.000 0.00 0.00 0.00 5.52
2151 2295 1.402259 CACAAACAAACACCACCGCTA 59.598 47.619 0.00 0.00 0.00 4.26
2152 2296 1.673920 ACAAACAAACACCACCGCTAG 59.326 47.619 0.00 0.00 0.00 3.42
2153 2297 1.001815 CAAACAAACACCACCGCTAGG 60.002 52.381 0.00 0.00 45.13 3.02
2154 2298 1.170290 AACAAACACCACCGCTAGGC 61.170 55.000 0.00 0.00 42.76 3.93
2155 2299 1.599518 CAAACACCACCGCTAGGCA 60.600 57.895 0.00 0.00 42.76 4.75
2156 2300 1.149627 AAACACCACCGCTAGGCAA 59.850 52.632 0.00 0.00 42.76 4.52
2157 2301 0.889186 AAACACCACCGCTAGGCAAG 60.889 55.000 0.00 0.00 42.76 4.01
2171 2315 5.818136 CTAGGCAAGCTACTATGCAAAAA 57.182 39.130 10.14 0.00 44.32 1.94
2172 2316 4.708726 AGGCAAGCTACTATGCAAAAAG 57.291 40.909 10.14 0.00 44.32 2.27
2173 2317 3.119352 AGGCAAGCTACTATGCAAAAAGC 60.119 43.478 10.14 0.00 44.32 3.51
2174 2318 3.182182 GCAAGCTACTATGCAAAAAGCC 58.818 45.455 3.21 0.00 44.83 4.35
2175 2319 3.119352 GCAAGCTACTATGCAAAAAGCCT 60.119 43.478 3.21 0.00 44.83 4.58
2176 2320 4.096382 GCAAGCTACTATGCAAAAAGCCTA 59.904 41.667 3.21 0.00 44.83 3.93
2177 2321 5.221126 GCAAGCTACTATGCAAAAAGCCTAT 60.221 40.000 3.21 0.00 44.83 2.57
2178 2322 6.433766 CAAGCTACTATGCAAAAAGCCTATC 58.566 40.000 9.31 0.00 44.83 2.08
2179 2323 5.066593 AGCTACTATGCAAAAAGCCTATCC 58.933 41.667 9.31 0.00 44.83 2.59
2180 2324 5.066593 GCTACTATGCAAAAAGCCTATCCT 58.933 41.667 0.00 0.00 44.83 3.24
2181 2325 6.043243 AGCTACTATGCAAAAAGCCTATCCTA 59.957 38.462 9.31 0.00 44.83 2.94
2182 2326 6.710744 GCTACTATGCAAAAAGCCTATCCTAA 59.289 38.462 0.00 0.00 44.83 2.69
2183 2327 7.228706 GCTACTATGCAAAAAGCCTATCCTAAA 59.771 37.037 0.00 0.00 44.83 1.85
2184 2328 7.334844 ACTATGCAAAAAGCCTATCCTAAAC 57.665 36.000 0.00 0.00 44.83 2.01
2185 2329 7.119387 ACTATGCAAAAAGCCTATCCTAAACT 58.881 34.615 0.00 0.00 44.83 2.66
2186 2330 5.643379 TGCAAAAAGCCTATCCTAAACTG 57.357 39.130 0.00 0.00 44.83 3.16
2187 2331 5.321102 TGCAAAAAGCCTATCCTAAACTGA 58.679 37.500 0.00 0.00 44.83 3.41
2188 2332 5.951747 TGCAAAAAGCCTATCCTAAACTGAT 59.048 36.000 0.00 0.00 44.83 2.90
2189 2333 7.116075 TGCAAAAAGCCTATCCTAAACTGATA 58.884 34.615 0.00 0.00 44.83 2.15
2190 2334 7.067008 TGCAAAAAGCCTATCCTAAACTGATAC 59.933 37.037 0.00 0.00 44.83 2.24
2191 2335 7.067008 GCAAAAAGCCTATCCTAAACTGATACA 59.933 37.037 0.00 0.00 37.23 2.29
2192 2336 8.398665 CAAAAAGCCTATCCTAAACTGATACAC 58.601 37.037 0.00 0.00 0.00 2.90
2193 2337 6.808321 AAGCCTATCCTAAACTGATACACA 57.192 37.500 0.00 0.00 0.00 3.72
2204 2348 3.325293 CTGATACACAGCACCAAGTCT 57.675 47.619 0.00 0.00 39.86 3.24
2205 2349 3.257393 CTGATACACAGCACCAAGTCTC 58.743 50.000 0.00 0.00 39.86 3.36
2206 2350 2.263077 GATACACAGCACCAAGTCTCG 58.737 52.381 0.00 0.00 0.00 4.04
2207 2351 1.324383 TACACAGCACCAAGTCTCGA 58.676 50.000 0.00 0.00 0.00 4.04
2208 2352 0.681733 ACACAGCACCAAGTCTCGAT 59.318 50.000 0.00 0.00 0.00 3.59
2209 2353 1.337260 ACACAGCACCAAGTCTCGATC 60.337 52.381 0.00 0.00 0.00 3.69
2210 2354 0.109086 ACAGCACCAAGTCTCGATCG 60.109 55.000 9.36 9.36 0.00 3.69
2211 2355 0.171231 CAGCACCAAGTCTCGATCGA 59.829 55.000 18.32 18.32 0.00 3.59
2212 2356 0.171455 AGCACCAAGTCTCGATCGAC 59.829 55.000 15.15 6.25 0.00 4.20
2213 2357 1.134530 GCACCAAGTCTCGATCGACG 61.135 60.000 15.15 10.75 44.09 5.12
2214 2358 1.134530 CACCAAGTCTCGATCGACGC 61.135 60.000 15.15 9.81 42.26 5.19
2215 2359 1.586564 CCAAGTCTCGATCGACGCC 60.587 63.158 15.15 4.76 42.26 5.68
2216 2360 1.934956 CAAGTCTCGATCGACGCCG 60.935 63.158 15.15 4.58 42.26 6.46
2217 2361 3.109612 AAGTCTCGATCGACGCCGG 62.110 63.158 15.15 4.16 42.26 6.13
2218 2362 3.570638 GTCTCGATCGACGCCGGA 61.571 66.667 15.15 6.82 42.26 5.14
2219 2363 3.570638 TCTCGATCGACGCCGGAC 61.571 66.667 15.15 0.00 42.26 4.79
2220 2364 3.872728 CTCGATCGACGCCGGACA 61.873 66.667 15.15 0.00 42.26 4.02
2221 2365 4.170062 TCGATCGACGCCGGACAC 62.170 66.667 15.15 0.00 42.26 3.67
2223 2367 3.823330 GATCGACGCCGGACACCT 61.823 66.667 5.05 0.00 36.24 4.00
2224 2368 3.753070 GATCGACGCCGGACACCTC 62.753 68.421 5.05 0.00 36.24 3.85
2233 2377 3.787394 GGACACCTCCGAAGACCA 58.213 61.111 0.00 0.00 0.00 4.02
2234 2378 1.292541 GGACACCTCCGAAGACCAC 59.707 63.158 0.00 0.00 0.00 4.16
2235 2379 1.469335 GGACACCTCCGAAGACCACA 61.469 60.000 0.00 0.00 0.00 4.17
2236 2380 0.319641 GACACCTCCGAAGACCACAC 60.320 60.000 0.00 0.00 0.00 3.82
2237 2381 0.759436 ACACCTCCGAAGACCACACT 60.759 55.000 0.00 0.00 0.00 3.55
2238 2382 0.393077 CACCTCCGAAGACCACACTT 59.607 55.000 0.00 0.00 0.00 3.16
2239 2383 0.680061 ACCTCCGAAGACCACACTTC 59.320 55.000 0.00 0.00 41.70 3.01
2240 2384 0.037232 CCTCCGAAGACCACACTTCC 60.037 60.000 0.00 0.00 41.99 3.46
2241 2385 0.679505 CTCCGAAGACCACACTTCCA 59.320 55.000 0.00 0.00 41.99 3.53
2242 2386 0.391597 TCCGAAGACCACACTTCCAC 59.608 55.000 0.00 0.00 41.99 4.02
2243 2387 0.105964 CCGAAGACCACACTTCCACA 59.894 55.000 0.00 0.00 41.99 4.17
2244 2388 1.502231 CGAAGACCACACTTCCACAG 58.498 55.000 0.00 0.00 41.99 3.66
2245 2389 1.068588 CGAAGACCACACTTCCACAGA 59.931 52.381 0.00 0.00 41.99 3.41
2246 2390 2.483013 CGAAGACCACACTTCCACAGAA 60.483 50.000 0.00 0.00 41.99 3.02
2247 2391 2.622064 AGACCACACTTCCACAGAAC 57.378 50.000 0.00 0.00 0.00 3.01
2248 2392 2.119495 AGACCACACTTCCACAGAACT 58.881 47.619 0.00 0.00 0.00 3.01
2249 2393 2.505819 AGACCACACTTCCACAGAACTT 59.494 45.455 0.00 0.00 0.00 2.66
2250 2394 2.872858 GACCACACTTCCACAGAACTTC 59.127 50.000 0.00 0.00 0.00 3.01
2251 2395 2.505819 ACCACACTTCCACAGAACTTCT 59.494 45.455 0.00 0.00 0.00 2.85
2252 2396 3.134458 CCACACTTCCACAGAACTTCTC 58.866 50.000 0.00 0.00 0.00 2.87
2253 2397 3.181461 CCACACTTCCACAGAACTTCTCT 60.181 47.826 0.00 0.00 33.23 3.10
2254 2398 4.446371 CACACTTCCACAGAACTTCTCTT 58.554 43.478 0.00 0.00 29.07 2.85
2255 2399 4.272018 CACACTTCCACAGAACTTCTCTTG 59.728 45.833 0.00 0.00 29.07 3.02
2256 2400 4.080863 ACACTTCCACAGAACTTCTCTTGT 60.081 41.667 0.00 0.00 29.07 3.16
2257 2401 4.509600 CACTTCCACAGAACTTCTCTTGTC 59.490 45.833 0.00 0.00 29.07 3.18
2258 2402 3.371102 TCCACAGAACTTCTCTTGTCG 57.629 47.619 0.00 0.00 29.07 4.35
2259 2403 2.956333 TCCACAGAACTTCTCTTGTCGA 59.044 45.455 0.00 0.00 29.07 4.20
2260 2404 3.053455 CCACAGAACTTCTCTTGTCGAC 58.947 50.000 9.11 9.11 29.07 4.20
2261 2405 2.721603 CACAGAACTTCTCTTGTCGACG 59.278 50.000 11.62 0.00 29.07 5.12
2262 2406 1.716581 CAGAACTTCTCTTGTCGACGC 59.283 52.381 11.62 0.00 29.07 5.19
2263 2407 1.337071 AGAACTTCTCTTGTCGACGCA 59.663 47.619 11.62 0.00 0.00 5.24
2264 2408 1.452399 GAACTTCTCTTGTCGACGCAC 59.548 52.381 11.62 0.00 0.00 5.34
2265 2409 0.318784 ACTTCTCTTGTCGACGCACC 60.319 55.000 11.62 0.00 0.00 5.01
2266 2410 0.318699 CTTCTCTTGTCGACGCACCA 60.319 55.000 11.62 0.00 0.00 4.17
2267 2411 0.317160 TTCTCTTGTCGACGCACCAT 59.683 50.000 11.62 0.00 0.00 3.55
2268 2412 0.109272 TCTCTTGTCGACGCACCATC 60.109 55.000 11.62 0.00 0.00 3.51
2269 2413 1.078759 CTCTTGTCGACGCACCATCC 61.079 60.000 11.62 0.00 0.00 3.51
2270 2414 1.374125 CTTGTCGACGCACCATCCA 60.374 57.895 11.62 0.00 0.00 3.41
2271 2415 1.626654 CTTGTCGACGCACCATCCAC 61.627 60.000 11.62 0.00 0.00 4.02
2272 2416 2.813908 GTCGACGCACCATCCACC 60.814 66.667 0.00 0.00 0.00 4.61
2273 2417 2.994995 TCGACGCACCATCCACCT 60.995 61.111 0.00 0.00 0.00 4.00
2274 2418 2.047274 CGACGCACCATCCACCTT 60.047 61.111 0.00 0.00 0.00 3.50
2275 2419 2.390599 CGACGCACCATCCACCTTG 61.391 63.158 0.00 0.00 0.00 3.61
2276 2420 1.003839 GACGCACCATCCACCTTGA 60.004 57.895 0.00 0.00 0.00 3.02
2277 2421 1.003355 ACGCACCATCCACCTTGAG 60.003 57.895 0.00 0.00 0.00 3.02
2278 2422 2.401766 CGCACCATCCACCTTGAGC 61.402 63.158 0.00 0.00 0.00 4.26
2279 2423 2.401766 GCACCATCCACCTTGAGCG 61.402 63.158 0.00 0.00 0.00 5.03
2280 2424 2.045926 ACCATCCACCTTGAGCGC 60.046 61.111 0.00 0.00 0.00 5.92
2281 2425 2.825836 CCATCCACCTTGAGCGCC 60.826 66.667 2.29 0.00 0.00 6.53
2282 2426 2.270205 CATCCACCTTGAGCGCCT 59.730 61.111 2.29 0.00 0.00 5.52
2283 2427 1.522092 CATCCACCTTGAGCGCCTA 59.478 57.895 2.29 0.00 0.00 3.93
2284 2428 0.107703 CATCCACCTTGAGCGCCTAA 60.108 55.000 2.29 0.00 0.00 2.69
2285 2429 0.179000 ATCCACCTTGAGCGCCTAAG 59.821 55.000 2.29 9.16 0.00 2.18
2286 2430 0.902984 TCCACCTTGAGCGCCTAAGA 60.903 55.000 19.38 0.91 0.00 2.10
2287 2431 0.460987 CCACCTTGAGCGCCTAAGAG 60.461 60.000 19.38 12.90 0.00 2.85
2288 2432 0.532573 CACCTTGAGCGCCTAAGAGA 59.467 55.000 19.38 0.00 0.00 3.10
2289 2433 1.066858 CACCTTGAGCGCCTAAGAGAA 60.067 52.381 19.38 0.00 0.00 2.87
2290 2434 1.623811 ACCTTGAGCGCCTAAGAGAAA 59.376 47.619 19.38 0.00 0.00 2.52
2291 2435 2.275318 CCTTGAGCGCCTAAGAGAAAG 58.725 52.381 19.38 6.06 0.00 2.62
2292 2436 2.354203 CCTTGAGCGCCTAAGAGAAAGT 60.354 50.000 19.38 0.00 0.00 2.66
2293 2437 2.370281 TGAGCGCCTAAGAGAAAGTG 57.630 50.000 2.29 0.00 0.00 3.16
2294 2438 1.066858 TGAGCGCCTAAGAGAAAGTGG 60.067 52.381 2.29 0.00 0.00 4.00
2295 2439 0.391793 AGCGCCTAAGAGAAAGTGGC 60.392 55.000 2.29 0.00 40.14 5.01
2296 2440 0.673644 GCGCCTAAGAGAAAGTGGCA 60.674 55.000 0.00 0.00 43.38 4.92
2297 2441 1.363744 CGCCTAAGAGAAAGTGGCAG 58.636 55.000 0.00 0.00 43.38 4.85
2298 2442 1.066858 CGCCTAAGAGAAAGTGGCAGA 60.067 52.381 0.00 0.00 43.38 4.26
2299 2443 2.419297 CGCCTAAGAGAAAGTGGCAGAT 60.419 50.000 0.00 0.00 43.38 2.90
2300 2444 2.941720 GCCTAAGAGAAAGTGGCAGATG 59.058 50.000 0.00 0.00 42.79 2.90
2301 2445 3.369892 GCCTAAGAGAAAGTGGCAGATGA 60.370 47.826 0.00 0.00 42.79 2.92
2302 2446 4.836825 CCTAAGAGAAAGTGGCAGATGAA 58.163 43.478 0.00 0.00 0.00 2.57
2303 2447 5.435291 CCTAAGAGAAAGTGGCAGATGAAT 58.565 41.667 0.00 0.00 0.00 2.57
2304 2448 5.296283 CCTAAGAGAAAGTGGCAGATGAATG 59.704 44.000 0.00 0.00 0.00 2.67
2305 2449 3.618351 AGAGAAAGTGGCAGATGAATGG 58.382 45.455 0.00 0.00 0.00 3.16
2306 2450 2.097825 AGAAAGTGGCAGATGAATGGC 58.902 47.619 0.00 0.00 45.50 4.40
2310 2454 4.993307 GGCAGATGAATGGCAGGA 57.007 55.556 0.00 0.00 44.71 3.86
2311 2455 2.412605 GGCAGATGAATGGCAGGAC 58.587 57.895 0.00 0.00 44.71 3.85
2312 2456 0.106819 GGCAGATGAATGGCAGGACT 60.107 55.000 0.00 0.00 44.71 3.85
2313 2457 1.307097 GCAGATGAATGGCAGGACTC 58.693 55.000 0.00 0.00 0.00 3.36
2314 2458 1.579698 CAGATGAATGGCAGGACTCG 58.420 55.000 0.00 0.00 0.00 4.18
2315 2459 1.137675 CAGATGAATGGCAGGACTCGA 59.862 52.381 0.00 0.00 0.00 4.04
2316 2460 2.045524 AGATGAATGGCAGGACTCGAT 58.954 47.619 0.00 0.00 0.00 3.59
2317 2461 2.036992 AGATGAATGGCAGGACTCGATC 59.963 50.000 0.00 0.00 0.00 3.69
2327 2471 2.426651 GACTCGATCCAATCCGGGA 58.573 57.895 0.00 0.00 42.21 5.14
2328 2472 0.750850 GACTCGATCCAATCCGGGAA 59.249 55.000 0.00 0.00 41.12 3.97
2329 2473 0.753262 ACTCGATCCAATCCGGGAAG 59.247 55.000 0.00 0.00 41.12 3.46
2330 2474 1.040646 CTCGATCCAATCCGGGAAGA 58.959 55.000 0.00 0.00 41.12 2.87
2331 2475 0.750850 TCGATCCAATCCGGGAAGAC 59.249 55.000 0.00 0.00 41.12 3.01
2332 2476 0.597637 CGATCCAATCCGGGAAGACG 60.598 60.000 0.00 2.46 41.12 4.18
2333 2477 0.880718 GATCCAATCCGGGAAGACGC 60.881 60.000 0.00 0.00 41.12 5.19
2334 2478 2.325393 ATCCAATCCGGGAAGACGCC 62.325 60.000 0.00 0.00 41.12 5.68
2335 2479 2.890474 CAATCCGGGAAGACGCCG 60.890 66.667 0.00 0.00 0.00 6.46
2336 2480 4.832608 AATCCGGGAAGACGCCGC 62.833 66.667 0.00 0.00 0.00 6.53
2342 2486 4.388499 GGAAGACGCCGCCTTGGA 62.388 66.667 0.00 0.00 42.00 3.53
2343 2487 2.125106 GAAGACGCCGCCTTGGAT 60.125 61.111 0.00 0.00 42.00 3.41
2344 2488 1.745489 GAAGACGCCGCCTTGGATT 60.745 57.895 0.00 0.00 42.00 3.01
2345 2489 1.706287 GAAGACGCCGCCTTGGATTC 61.706 60.000 0.00 0.00 42.00 2.52
2346 2490 2.435938 GACGCCGCCTTGGATTCA 60.436 61.111 0.00 0.00 42.00 2.57
2347 2491 2.746277 ACGCCGCCTTGGATTCAC 60.746 61.111 0.00 0.00 42.00 3.18
2348 2492 3.508840 CGCCGCCTTGGATTCACC 61.509 66.667 0.00 0.00 42.00 4.02
2349 2493 3.508840 GCCGCCTTGGATTCACCG 61.509 66.667 0.00 0.00 42.00 4.94
2350 2494 2.267642 CCGCCTTGGATTCACCGA 59.732 61.111 0.00 0.00 42.00 4.69
2351 2495 2.106683 CCGCCTTGGATTCACCGAC 61.107 63.158 0.00 0.00 42.00 4.79
2352 2496 2.452813 CGCCTTGGATTCACCGACG 61.453 63.158 0.00 0.00 42.61 5.12
2353 2497 1.079405 GCCTTGGATTCACCGACGA 60.079 57.895 0.00 0.00 42.61 4.20
2354 2498 1.359459 GCCTTGGATTCACCGACGAC 61.359 60.000 0.00 0.00 42.61 4.34
2355 2499 0.739813 CCTTGGATTCACCGACGACC 60.740 60.000 0.00 0.00 42.61 4.79
2356 2500 0.037697 CTTGGATTCACCGACGACCA 60.038 55.000 0.00 0.00 42.61 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 6.932356 ACAGCAGTACTATCCAAATCAATG 57.068 37.500 0.00 0.00 0.00 2.82
17 18 5.230942 ACACATCTTCAACTACAGCAGTAC 58.769 41.667 0.00 0.00 36.04 2.73
38 39 7.148086 GCATAAGACCAAAATCTTGTGGATACA 60.148 37.037 6.14 0.00 43.99 2.29
41 42 5.716228 TGCATAAGACCAAAATCTTGTGGAT 59.284 36.000 6.14 0.00 43.99 3.41
70 71 5.279106 CCATGACAAAATCCTCTTCAAAGCA 60.279 40.000 0.00 0.00 0.00 3.91
71 72 5.166398 CCATGACAAAATCCTCTTCAAAGC 58.834 41.667 0.00 0.00 0.00 3.51
81 82 3.987220 CGAAACCAACCATGACAAAATCC 59.013 43.478 0.00 0.00 0.00 3.01
183 187 2.337170 GTTGTTTTTCCGGCCCCG 59.663 61.111 0.00 0.00 39.44 5.73
189 193 3.506810 TCTTGCAAGTGTTGTTTTTCCG 58.493 40.909 25.19 0.00 0.00 4.30
207 211 7.235812 ACCCTAGATGAAGTGTAGACTTTTCTT 59.764 37.037 18.23 3.17 42.80 2.52
240 244 0.100503 AAGCAACCGTGTCAAAGTGC 59.899 50.000 0.00 0.00 0.00 4.40
268 272 2.766263 TGCCGGTGAACTTCTGAGATAT 59.234 45.455 1.90 0.00 0.00 1.63
284 288 4.638421 TGTCCTTTAGTAAATCAATGCCGG 59.362 41.667 0.00 0.00 0.00 6.13
285 289 5.811399 TGTCCTTTAGTAAATCAATGCCG 57.189 39.130 0.00 0.00 0.00 5.69
324 328 2.187946 GTGTCATCTCCGCCCCTG 59.812 66.667 0.00 0.00 0.00 4.45
339 343 3.529533 AGCTTGATCGATTTCTCTGGTG 58.470 45.455 0.00 0.00 0.00 4.17
340 344 3.902881 AGCTTGATCGATTTCTCTGGT 57.097 42.857 0.00 0.00 0.00 4.00
342 346 5.107824 TCTGAAGCTTGATCGATTTCTCTG 58.892 41.667 2.10 0.00 0.00 3.35
344 348 5.108517 ACTCTGAAGCTTGATCGATTTCTC 58.891 41.667 2.10 0.00 0.00 2.87
346 350 8.581057 TTATACTCTGAAGCTTGATCGATTTC 57.419 34.615 2.10 0.00 0.00 2.17
348 352 7.151308 CCTTATACTCTGAAGCTTGATCGATT 58.849 38.462 2.10 0.00 0.00 3.34
349 353 6.266558 ACCTTATACTCTGAAGCTTGATCGAT 59.733 38.462 2.10 0.00 0.00 3.59
350 354 5.594725 ACCTTATACTCTGAAGCTTGATCGA 59.405 40.000 2.10 0.00 0.00 3.59
351 355 5.689514 CACCTTATACTCTGAAGCTTGATCG 59.310 44.000 2.10 0.00 0.00 3.69
358 362 3.039011 TCCCCACCTTATACTCTGAAGC 58.961 50.000 0.00 0.00 0.00 3.86
359 363 5.693769 TTTCCCCACCTTATACTCTGAAG 57.306 43.478 0.00 0.00 0.00 3.02
362 366 6.062258 TCTTTTTCCCCACCTTATACTCTG 57.938 41.667 0.00 0.00 0.00 3.35
370 374 1.272480 CCGGATCTTTTTCCCCACCTT 60.272 52.381 0.00 0.00 31.61 3.50
378 382 6.961360 AATAGGAAATCCCGGATCTTTTTC 57.039 37.500 0.73 1.65 40.87 2.29
381 385 6.509523 TGTAATAGGAAATCCCGGATCTTT 57.490 37.500 0.73 0.00 40.87 2.52
402 406 7.341256 TCGAGGACTACCAAGTATCTTTTATGT 59.659 37.037 0.00 0.00 35.56 2.29
405 409 7.558807 TCATCGAGGACTACCAAGTATCTTTTA 59.441 37.037 0.00 0.00 35.56 1.52
423 427 2.009774 GTTTCCCACACATCATCGAGG 58.990 52.381 0.00 0.00 0.00 4.63
479 483 4.263462 TGCCTTTAGCTTCATCTGGAAAGA 60.263 41.667 0.00 0.00 44.23 2.52
514 518 4.315803 ACATCTTCCTTTCGTGTGGTTAG 58.684 43.478 0.00 0.00 0.00 2.34
525 529 7.983484 GGAATATGATTTGCAACATCTTCCTTT 59.017 33.333 24.93 13.67 41.85 3.11
528 532 6.808829 TGGAATATGATTTGCAACATCTTCC 58.191 36.000 25.20 25.20 43.58 3.46
541 545 2.226437 GCGTCGGCATTGGAATATGATT 59.774 45.455 0.00 0.00 39.62 2.57
542 546 1.806542 GCGTCGGCATTGGAATATGAT 59.193 47.619 0.00 0.00 39.62 2.45
543 547 1.225855 GCGTCGGCATTGGAATATGA 58.774 50.000 0.00 0.00 39.62 2.15
544 548 0.943673 TGCGTCGGCATTGGAATATG 59.056 50.000 0.00 0.00 46.21 1.78
545 549 3.395210 TGCGTCGGCATTGGAATAT 57.605 47.368 0.00 0.00 46.21 1.28
546 550 4.943822 TGCGTCGGCATTGGAATA 57.056 50.000 0.00 0.00 46.21 1.75
572 576 5.240891 TCAAGTCATCCAAGTGCTTAAGAG 58.759 41.667 6.67 0.00 0.00 2.85
573 577 5.227569 TCAAGTCATCCAAGTGCTTAAGA 57.772 39.130 6.67 0.00 0.00 2.10
574 578 5.947228 TTCAAGTCATCCAAGTGCTTAAG 57.053 39.130 0.00 0.00 0.00 1.85
575 579 6.321181 ACTTTTCAAGTCATCCAAGTGCTTAA 59.679 34.615 0.00 0.00 37.02 1.85
576 580 5.827797 ACTTTTCAAGTCATCCAAGTGCTTA 59.172 36.000 0.00 0.00 37.02 3.09
577 581 4.646492 ACTTTTCAAGTCATCCAAGTGCTT 59.354 37.500 0.00 0.00 37.02 3.91
578 582 4.210331 ACTTTTCAAGTCATCCAAGTGCT 58.790 39.130 0.00 0.00 37.02 4.40
579 583 4.574599 ACTTTTCAAGTCATCCAAGTGC 57.425 40.909 0.00 0.00 37.02 4.40
580 584 5.284079 CCAACTTTTCAAGTCATCCAAGTG 58.716 41.667 0.00 0.00 41.91 3.16
581 585 4.342092 CCCAACTTTTCAAGTCATCCAAGT 59.658 41.667 0.00 0.00 41.91 3.16
582 586 4.584325 TCCCAACTTTTCAAGTCATCCAAG 59.416 41.667 0.00 0.00 41.91 3.61
583 587 4.541705 TCCCAACTTTTCAAGTCATCCAA 58.458 39.130 0.00 0.00 41.91 3.53
584 588 4.144297 CTCCCAACTTTTCAAGTCATCCA 58.856 43.478 0.00 0.00 41.91 3.41
585 589 3.057245 GCTCCCAACTTTTCAAGTCATCC 60.057 47.826 0.00 0.00 41.91 3.51
586 590 3.823304 AGCTCCCAACTTTTCAAGTCATC 59.177 43.478 0.00 0.00 41.91 2.92
587 591 3.837355 AGCTCCCAACTTTTCAAGTCAT 58.163 40.909 0.00 0.00 41.91 3.06
588 592 3.297134 AGCTCCCAACTTTTCAAGTCA 57.703 42.857 0.00 0.00 41.91 3.41
589 593 5.966742 AATAGCTCCCAACTTTTCAAGTC 57.033 39.130 0.00 0.00 41.91 3.01
590 594 7.004691 ACTAAATAGCTCCCAACTTTTCAAGT 58.995 34.615 0.00 0.00 45.46 3.16
591 595 7.454260 ACTAAATAGCTCCCAACTTTTCAAG 57.546 36.000 0.00 0.00 0.00 3.02
592 596 7.833285 AACTAAATAGCTCCCAACTTTTCAA 57.167 32.000 0.00 0.00 0.00 2.69
593 597 7.833285 AAACTAAATAGCTCCCAACTTTTCA 57.167 32.000 0.00 0.00 0.00 2.69
1534 1672 1.445410 CGTTGGATTCGGCGTCTGA 60.445 57.895 6.85 0.00 0.00 3.27
1614 1753 7.583898 GGATTCAGATCGGATCCATCTGGAC 62.584 52.000 31.96 25.73 45.14 4.02
1749 1888 4.629523 GGCAAACGTGGGGTCCGA 62.630 66.667 0.00 0.00 0.00 4.55
1804 1943 1.834822 CTCCCCATCCTCTCCGTCC 60.835 68.421 0.00 0.00 0.00 4.79
1899 2040 2.750637 GACGCCCCTCGAGTCTCA 60.751 66.667 12.31 0.00 41.67 3.27
1951 2095 9.391006 TGATGGTAAAGCTTTGGTACTAAATAG 57.609 33.333 22.02 0.00 0.00 1.73
1952 2096 9.914834 ATGATGGTAAAGCTTTGGTACTAAATA 57.085 29.630 22.02 2.16 0.00 1.40
1953 2097 8.823220 ATGATGGTAAAGCTTTGGTACTAAAT 57.177 30.769 22.02 7.58 0.00 1.40
1954 2098 9.169592 GTATGATGGTAAAGCTTTGGTACTAAA 57.830 33.333 22.02 4.21 0.00 1.85
1955 2099 8.322828 TGTATGATGGTAAAGCTTTGGTACTAA 58.677 33.333 22.02 5.63 0.00 2.24
1956 2100 7.853299 TGTATGATGGTAAAGCTTTGGTACTA 58.147 34.615 22.02 10.32 0.00 1.82
1957 2101 6.717289 TGTATGATGGTAAAGCTTTGGTACT 58.283 36.000 22.02 2.58 0.00 2.73
1958 2102 6.821665 TCTGTATGATGGTAAAGCTTTGGTAC 59.178 38.462 22.02 11.71 0.00 3.34
1959 2103 6.953101 TCTGTATGATGGTAAAGCTTTGGTA 58.047 36.000 22.02 7.67 0.00 3.25
1960 2104 5.815581 TCTGTATGATGGTAAAGCTTTGGT 58.184 37.500 22.02 4.67 0.00 3.67
1961 2105 6.599244 TCTTCTGTATGATGGTAAAGCTTTGG 59.401 38.462 22.02 0.00 0.00 3.28
1962 2106 7.615582 TCTTCTGTATGATGGTAAAGCTTTG 57.384 36.000 22.02 0.22 0.00 2.77
1963 2107 8.270744 AGATCTTCTGTATGATGGTAAAGCTTT 58.729 33.333 17.30 17.30 0.00 3.51
1964 2108 7.800092 AGATCTTCTGTATGATGGTAAAGCTT 58.200 34.615 0.00 0.00 0.00 3.74
1965 2109 7.372260 AGATCTTCTGTATGATGGTAAAGCT 57.628 36.000 0.00 0.00 0.00 3.74
1966 2110 9.364989 GATAGATCTTCTGTATGATGGTAAAGC 57.635 37.037 0.00 0.00 0.00 3.51
1969 2113 9.367160 TGTGATAGATCTTCTGTATGATGGTAA 57.633 33.333 0.00 0.00 0.00 2.85
1970 2114 8.797438 GTGTGATAGATCTTCTGTATGATGGTA 58.203 37.037 0.00 0.00 0.00 3.25
1971 2115 7.522889 CGTGTGATAGATCTTCTGTATGATGGT 60.523 40.741 0.00 0.00 0.00 3.55
1972 2116 6.805760 CGTGTGATAGATCTTCTGTATGATGG 59.194 42.308 0.00 0.00 0.00 3.51
1973 2117 7.325579 CACGTGTGATAGATCTTCTGTATGATG 59.674 40.741 7.58 0.00 0.00 3.07
1974 2118 7.229506 TCACGTGTGATAGATCTTCTGTATGAT 59.770 37.037 16.51 0.00 34.14 2.45
1975 2119 6.542370 TCACGTGTGATAGATCTTCTGTATGA 59.458 38.462 16.51 0.00 34.14 2.15
1976 2120 6.634837 GTCACGTGTGATAGATCTTCTGTATG 59.365 42.308 16.51 0.00 42.18 2.39
1977 2121 6.318900 TGTCACGTGTGATAGATCTTCTGTAT 59.681 38.462 16.51 0.00 42.18 2.29
1978 2122 5.646360 TGTCACGTGTGATAGATCTTCTGTA 59.354 40.000 16.51 0.00 42.18 2.74
1979 2123 4.459337 TGTCACGTGTGATAGATCTTCTGT 59.541 41.667 16.51 0.00 42.18 3.41
1980 2124 4.986622 TGTCACGTGTGATAGATCTTCTG 58.013 43.478 16.51 0.00 42.18 3.02
1981 2125 5.451103 CCATGTCACGTGTGATAGATCTTCT 60.451 44.000 16.51 0.00 42.18 2.85
1982 2126 4.742167 CCATGTCACGTGTGATAGATCTTC 59.258 45.833 16.51 0.00 42.18 2.87
1983 2127 4.402474 TCCATGTCACGTGTGATAGATCTT 59.598 41.667 16.51 0.00 42.18 2.40
1984 2128 3.954258 TCCATGTCACGTGTGATAGATCT 59.046 43.478 16.51 0.00 42.18 2.75
1985 2129 4.307443 TCCATGTCACGTGTGATAGATC 57.693 45.455 16.51 0.00 42.18 2.75
1986 2130 4.100035 ACATCCATGTCACGTGTGATAGAT 59.900 41.667 16.51 10.82 42.18 1.98
1987 2131 3.447229 ACATCCATGTCACGTGTGATAGA 59.553 43.478 16.51 8.95 42.18 1.98
1988 2132 3.553105 CACATCCATGTCACGTGTGATAG 59.447 47.826 16.51 3.45 41.93 2.08
1989 2133 3.056179 ACACATCCATGTCACGTGTGATA 60.056 43.478 16.51 3.80 41.93 2.15
1990 2134 2.289631 ACACATCCATGTCACGTGTGAT 60.290 45.455 16.51 5.85 41.93 3.06
1991 2135 1.069978 ACACATCCATGTCACGTGTGA 59.930 47.619 16.51 3.41 41.93 3.58
1992 2136 1.511850 ACACATCCATGTCACGTGTG 58.488 50.000 16.51 6.55 44.19 3.82
1993 2137 2.254546 AACACATCCATGTCACGTGT 57.745 45.000 16.51 0.00 42.36 4.49
1994 2138 3.624326 AAAACACATCCATGTCACGTG 57.376 42.857 9.94 9.94 39.39 4.49
2015 2159 2.416431 GCCTAGGCGTACTCTCGAAAAA 60.416 50.000 20.16 0.00 0.00 1.94
2016 2160 1.133790 GCCTAGGCGTACTCTCGAAAA 59.866 52.381 20.16 0.00 0.00 2.29
2017 2161 0.737219 GCCTAGGCGTACTCTCGAAA 59.263 55.000 20.16 0.00 0.00 3.46
2018 2162 2.401967 GCCTAGGCGTACTCTCGAA 58.598 57.895 20.16 0.00 0.00 3.71
2019 2163 4.137879 GCCTAGGCGTACTCTCGA 57.862 61.111 20.16 0.00 0.00 4.04
2029 2173 0.680061 AAGCTATGGTACGCCTAGGC 59.320 55.000 24.75 24.75 35.27 3.93
2030 2174 4.803098 ATAAAGCTATGGTACGCCTAGG 57.197 45.455 3.67 3.67 35.27 3.02
2031 2175 6.754702 TCTATAAAGCTATGGTACGCCTAG 57.245 41.667 0.00 0.00 35.27 3.02
2032 2176 6.152323 CCTTCTATAAAGCTATGGTACGCCTA 59.848 42.308 0.00 0.00 35.27 3.93
2033 2177 5.047235 CCTTCTATAAAGCTATGGTACGCCT 60.047 44.000 0.00 0.00 35.27 5.52
2034 2178 5.169295 CCTTCTATAAAGCTATGGTACGCC 58.831 45.833 0.00 0.00 0.00 5.68
2035 2179 4.626172 GCCTTCTATAAAGCTATGGTACGC 59.374 45.833 0.00 0.00 0.00 4.42
2036 2180 5.779922 TGCCTTCTATAAAGCTATGGTACG 58.220 41.667 0.00 0.00 0.00 3.67
2037 2181 6.994221 TCTGCCTTCTATAAAGCTATGGTAC 58.006 40.000 0.00 0.00 0.00 3.34
2038 2182 7.612065 TTCTGCCTTCTATAAAGCTATGGTA 57.388 36.000 0.00 0.00 0.00 3.25
2039 2183 6.500589 TTCTGCCTTCTATAAAGCTATGGT 57.499 37.500 0.00 0.00 0.00 3.55
2040 2184 7.992754 AATTCTGCCTTCTATAAAGCTATGG 57.007 36.000 0.00 0.00 0.00 2.74
2050 2194 9.959721 TTCTTGTAACTAAATTCTGCCTTCTAT 57.040 29.630 0.00 0.00 0.00 1.98
2051 2195 9.787435 TTTCTTGTAACTAAATTCTGCCTTCTA 57.213 29.630 0.00 0.00 0.00 2.10
2052 2196 8.691661 TTTCTTGTAACTAAATTCTGCCTTCT 57.308 30.769 0.00 0.00 0.00 2.85
2053 2197 8.568794 ACTTTCTTGTAACTAAATTCTGCCTTC 58.431 33.333 0.00 0.00 0.00 3.46
2054 2198 8.465273 ACTTTCTTGTAACTAAATTCTGCCTT 57.535 30.769 0.00 0.00 0.00 4.35
2055 2199 8.465273 AACTTTCTTGTAACTAAATTCTGCCT 57.535 30.769 0.00 0.00 0.00 4.75
2056 2200 9.608617 GTAACTTTCTTGTAACTAAATTCTGCC 57.391 33.333 0.00 0.00 0.00 4.85
2057 2201 9.608617 GGTAACTTTCTTGTAACTAAATTCTGC 57.391 33.333 0.00 0.00 0.00 4.26
2058 2202 9.807386 CGGTAACTTTCTTGTAACTAAATTCTG 57.193 33.333 0.00 0.00 0.00 3.02
2059 2203 8.501580 GCGGTAACTTTCTTGTAACTAAATTCT 58.498 33.333 0.00 0.00 0.00 2.40
2060 2204 8.501580 AGCGGTAACTTTCTTGTAACTAAATTC 58.498 33.333 0.00 0.00 0.00 2.17
2061 2205 8.387190 AGCGGTAACTTTCTTGTAACTAAATT 57.613 30.769 0.00 0.00 0.00 1.82
2062 2206 7.148689 CGAGCGGTAACTTTCTTGTAACTAAAT 60.149 37.037 0.00 0.00 0.00 1.40
2063 2207 6.144402 CGAGCGGTAACTTTCTTGTAACTAAA 59.856 38.462 0.00 0.00 0.00 1.85
2064 2208 5.630680 CGAGCGGTAACTTTCTTGTAACTAA 59.369 40.000 0.00 0.00 0.00 2.24
2065 2209 5.048782 TCGAGCGGTAACTTTCTTGTAACTA 60.049 40.000 0.00 0.00 0.00 2.24
2066 2210 3.985925 CGAGCGGTAACTTTCTTGTAACT 59.014 43.478 0.00 0.00 0.00 2.24
2067 2211 3.983344 TCGAGCGGTAACTTTCTTGTAAC 59.017 43.478 0.00 0.00 0.00 2.50
2068 2212 4.241590 TCGAGCGGTAACTTTCTTGTAA 57.758 40.909 0.00 0.00 0.00 2.41
2069 2213 3.921119 TCGAGCGGTAACTTTCTTGTA 57.079 42.857 0.00 0.00 0.00 2.41
2070 2214 2.806608 TCGAGCGGTAACTTTCTTGT 57.193 45.000 0.00 0.00 0.00 3.16
2071 2215 2.222819 GCATCGAGCGGTAACTTTCTTG 60.223 50.000 0.00 0.00 0.00 3.02
2072 2216 2.000447 GCATCGAGCGGTAACTTTCTT 59.000 47.619 0.00 0.00 0.00 2.52
2073 2217 1.641577 GCATCGAGCGGTAACTTTCT 58.358 50.000 0.00 0.00 0.00 2.52
2086 2230 2.202610 CCTCGTTGCTCGCATCGA 60.203 61.111 19.86 19.86 43.15 3.59
2087 2231 3.257561 CCCTCGTTGCTCGCATCG 61.258 66.667 14.29 14.29 39.60 3.84
2088 2232 3.567797 GCCCTCGTTGCTCGCATC 61.568 66.667 0.00 0.00 39.67 3.91
2089 2233 4.393155 TGCCCTCGTTGCTCGCAT 62.393 61.111 0.00 0.00 39.67 4.73
2093 2237 2.437359 ATGCTGCCCTCGTTGCTC 60.437 61.111 0.00 0.00 0.00 4.26
2094 2238 2.749044 CATGCTGCCCTCGTTGCT 60.749 61.111 0.00 0.00 0.00 3.91
2095 2239 2.334946 TTCATGCTGCCCTCGTTGC 61.335 57.895 0.00 0.00 0.00 4.17
2096 2240 1.236616 TGTTCATGCTGCCCTCGTTG 61.237 55.000 0.00 0.00 0.00 4.10
2097 2241 1.073025 TGTTCATGCTGCCCTCGTT 59.927 52.632 0.00 0.00 0.00 3.85
2098 2242 1.672356 GTGTTCATGCTGCCCTCGT 60.672 57.895 0.00 0.00 0.00 4.18
2099 2243 2.401766 GGTGTTCATGCTGCCCTCG 61.402 63.158 0.00 0.00 0.00 4.63
2100 2244 1.303561 TGGTGTTCATGCTGCCCTC 60.304 57.895 0.00 0.00 0.00 4.30
2101 2245 1.604593 GTGGTGTTCATGCTGCCCT 60.605 57.895 0.00 0.00 0.00 5.19
2102 2246 1.902918 TGTGGTGTTCATGCTGCCC 60.903 57.895 0.00 0.00 0.00 5.36
2103 2247 1.286880 GTGTGGTGTTCATGCTGCC 59.713 57.895 0.00 0.00 0.00 4.85
2104 2248 1.286880 GGTGTGGTGTTCATGCTGC 59.713 57.895 0.00 0.00 0.00 5.25
2105 2249 0.884259 TCGGTGTGGTGTTCATGCTG 60.884 55.000 0.00 0.00 0.00 4.41
2106 2250 0.884704 GTCGGTGTGGTGTTCATGCT 60.885 55.000 0.00 0.00 0.00 3.79
2107 2251 1.163420 TGTCGGTGTGGTGTTCATGC 61.163 55.000 0.00 0.00 0.00 4.06
2108 2252 1.264020 CTTGTCGGTGTGGTGTTCATG 59.736 52.381 0.00 0.00 0.00 3.07
2109 2253 1.140052 TCTTGTCGGTGTGGTGTTCAT 59.860 47.619 0.00 0.00 0.00 2.57
2110 2254 0.537653 TCTTGTCGGTGTGGTGTTCA 59.462 50.000 0.00 0.00 0.00 3.18
2111 2255 0.935196 GTCTTGTCGGTGTGGTGTTC 59.065 55.000 0.00 0.00 0.00 3.18
2112 2256 0.463116 GGTCTTGTCGGTGTGGTGTT 60.463 55.000 0.00 0.00 0.00 3.32
2113 2257 1.145377 GGTCTTGTCGGTGTGGTGT 59.855 57.895 0.00 0.00 0.00 4.16
2114 2258 1.145156 TGGTCTTGTCGGTGTGGTG 59.855 57.895 0.00 0.00 0.00 4.17
2115 2259 1.145377 GTGGTCTTGTCGGTGTGGT 59.855 57.895 0.00 0.00 0.00 4.16
2116 2260 0.462937 TTGTGGTCTTGTCGGTGTGG 60.463 55.000 0.00 0.00 0.00 4.17
2117 2261 1.063469 GTTTGTGGTCTTGTCGGTGTG 59.937 52.381 0.00 0.00 0.00 3.82
2118 2262 1.339247 TGTTTGTGGTCTTGTCGGTGT 60.339 47.619 0.00 0.00 0.00 4.16
2119 2263 1.374560 TGTTTGTGGTCTTGTCGGTG 58.625 50.000 0.00 0.00 0.00 4.94
2120 2264 2.116827 TTGTTTGTGGTCTTGTCGGT 57.883 45.000 0.00 0.00 0.00 4.69
2121 2265 2.162608 TGTTTGTTTGTGGTCTTGTCGG 59.837 45.455 0.00 0.00 0.00 4.79
2122 2266 3.168193 GTGTTTGTTTGTGGTCTTGTCG 58.832 45.455 0.00 0.00 0.00 4.35
2123 2267 3.057174 TGGTGTTTGTTTGTGGTCTTGTC 60.057 43.478 0.00 0.00 0.00 3.18
2124 2268 2.894126 TGGTGTTTGTTTGTGGTCTTGT 59.106 40.909 0.00 0.00 0.00 3.16
2125 2269 3.249917 GTGGTGTTTGTTTGTGGTCTTG 58.750 45.455 0.00 0.00 0.00 3.02
2126 2270 2.232696 GGTGGTGTTTGTTTGTGGTCTT 59.767 45.455 0.00 0.00 0.00 3.01
2127 2271 1.822371 GGTGGTGTTTGTTTGTGGTCT 59.178 47.619 0.00 0.00 0.00 3.85
2128 2272 1.468395 CGGTGGTGTTTGTTTGTGGTC 60.468 52.381 0.00 0.00 0.00 4.02
2129 2273 0.528470 CGGTGGTGTTTGTTTGTGGT 59.472 50.000 0.00 0.00 0.00 4.16
2130 2274 0.804156 GCGGTGGTGTTTGTTTGTGG 60.804 55.000 0.00 0.00 0.00 4.17
2131 2275 0.172352 AGCGGTGGTGTTTGTTTGTG 59.828 50.000 0.00 0.00 0.00 3.33
2132 2276 1.673920 CTAGCGGTGGTGTTTGTTTGT 59.326 47.619 0.00 0.00 0.00 2.83
2133 2277 1.001815 CCTAGCGGTGGTGTTTGTTTG 60.002 52.381 0.00 0.00 0.00 2.93
2134 2278 1.314730 CCTAGCGGTGGTGTTTGTTT 58.685 50.000 0.00 0.00 0.00 2.83
2135 2279 1.170290 GCCTAGCGGTGGTGTTTGTT 61.170 55.000 0.00 0.00 0.00 2.83
2136 2280 1.599797 GCCTAGCGGTGGTGTTTGT 60.600 57.895 0.00 0.00 0.00 2.83
2137 2281 1.169661 TTGCCTAGCGGTGGTGTTTG 61.170 55.000 0.00 0.00 0.00 2.93
2138 2282 0.889186 CTTGCCTAGCGGTGGTGTTT 60.889 55.000 0.00 0.00 0.00 2.83
2139 2283 1.302511 CTTGCCTAGCGGTGGTGTT 60.303 57.895 0.00 0.00 0.00 3.32
2140 2284 2.347490 CTTGCCTAGCGGTGGTGT 59.653 61.111 0.00 0.00 0.00 4.16
2141 2285 3.127533 GCTTGCCTAGCGGTGGTG 61.128 66.667 0.00 0.00 40.71 4.17
2149 2293 5.731686 GCTTTTTGCATAGTAGCTTGCCTAG 60.732 44.000 5.68 0.12 42.31 3.02
2150 2294 4.096382 GCTTTTTGCATAGTAGCTTGCCTA 59.904 41.667 5.68 0.00 42.31 3.93
2151 2295 3.119352 GCTTTTTGCATAGTAGCTTGCCT 60.119 43.478 5.68 0.00 42.31 4.75
2152 2296 3.182182 GCTTTTTGCATAGTAGCTTGCC 58.818 45.455 5.68 0.00 42.31 4.52
2153 2297 3.119352 AGGCTTTTTGCATAGTAGCTTGC 60.119 43.478 1.00 1.00 45.15 4.01
2154 2298 4.708726 AGGCTTTTTGCATAGTAGCTTG 57.291 40.909 0.00 0.00 45.15 4.01
2155 2299 5.532779 GGATAGGCTTTTTGCATAGTAGCTT 59.467 40.000 0.00 7.76 41.42 3.74
2156 2300 5.066593 GGATAGGCTTTTTGCATAGTAGCT 58.933 41.667 0.00 0.00 41.42 3.32
2157 2301 5.066593 AGGATAGGCTTTTTGCATAGTAGC 58.933 41.667 0.00 0.00 41.42 3.58
2158 2302 8.560374 GTTTAGGATAGGCTTTTTGCATAGTAG 58.440 37.037 0.00 0.00 41.42 2.57
2159 2303 8.272173 AGTTTAGGATAGGCTTTTTGCATAGTA 58.728 33.333 0.00 0.00 41.42 1.82
2160 2304 7.067494 CAGTTTAGGATAGGCTTTTTGCATAGT 59.933 37.037 0.00 0.00 41.42 2.12
2161 2305 7.283127 TCAGTTTAGGATAGGCTTTTTGCATAG 59.717 37.037 0.00 0.00 41.42 2.23
2162 2306 7.116075 TCAGTTTAGGATAGGCTTTTTGCATA 58.884 34.615 0.00 0.00 45.15 3.14
2163 2307 5.951747 TCAGTTTAGGATAGGCTTTTTGCAT 59.048 36.000 0.00 0.00 45.15 3.96
2164 2308 5.321102 TCAGTTTAGGATAGGCTTTTTGCA 58.679 37.500 0.00 0.00 45.15 4.08
2165 2309 5.897377 TCAGTTTAGGATAGGCTTTTTGC 57.103 39.130 0.00 0.00 41.94 3.68
2166 2310 8.398665 GTGTATCAGTTTAGGATAGGCTTTTTG 58.601 37.037 0.00 0.00 0.00 2.44
2167 2311 8.107095 TGTGTATCAGTTTAGGATAGGCTTTTT 58.893 33.333 0.00 0.00 0.00 1.94
2168 2312 7.630082 TGTGTATCAGTTTAGGATAGGCTTTT 58.370 34.615 0.00 0.00 0.00 2.27
2169 2313 7.195374 TGTGTATCAGTTTAGGATAGGCTTT 57.805 36.000 0.00 0.00 0.00 3.51
2170 2314 6.686632 GCTGTGTATCAGTTTAGGATAGGCTT 60.687 42.308 0.00 0.00 45.23 4.35
2171 2315 5.221541 GCTGTGTATCAGTTTAGGATAGGCT 60.222 44.000 0.00 0.00 45.23 4.58
2172 2316 4.991687 GCTGTGTATCAGTTTAGGATAGGC 59.008 45.833 0.00 0.00 45.23 3.93
2173 2317 5.986135 GTGCTGTGTATCAGTTTAGGATAGG 59.014 44.000 0.00 0.00 45.23 2.57
2174 2318 5.986135 GGTGCTGTGTATCAGTTTAGGATAG 59.014 44.000 0.00 0.00 45.23 2.08
2175 2319 5.423931 TGGTGCTGTGTATCAGTTTAGGATA 59.576 40.000 0.00 0.00 45.23 2.59
2176 2320 4.225042 TGGTGCTGTGTATCAGTTTAGGAT 59.775 41.667 0.00 0.00 45.23 3.24
2177 2321 3.580895 TGGTGCTGTGTATCAGTTTAGGA 59.419 43.478 0.00 0.00 45.23 2.94
2178 2322 3.937814 TGGTGCTGTGTATCAGTTTAGG 58.062 45.455 0.00 0.00 45.23 2.69
2179 2323 4.997395 ACTTGGTGCTGTGTATCAGTTTAG 59.003 41.667 0.00 0.00 45.23 1.85
2180 2324 4.968259 ACTTGGTGCTGTGTATCAGTTTA 58.032 39.130 0.00 0.00 45.23 2.01
2181 2325 3.815401 GACTTGGTGCTGTGTATCAGTTT 59.185 43.478 0.00 0.00 45.23 2.66
2182 2326 3.071602 AGACTTGGTGCTGTGTATCAGTT 59.928 43.478 0.00 0.00 45.23 3.16
2183 2327 2.634940 AGACTTGGTGCTGTGTATCAGT 59.365 45.455 0.00 0.00 45.23 3.41
2184 2328 3.257393 GAGACTTGGTGCTGTGTATCAG 58.743 50.000 0.00 0.00 46.12 2.90
2185 2329 2.352715 CGAGACTTGGTGCTGTGTATCA 60.353 50.000 0.00 0.00 0.00 2.15
2186 2330 2.094700 TCGAGACTTGGTGCTGTGTATC 60.095 50.000 0.00 0.00 0.00 2.24
2187 2331 1.893137 TCGAGACTTGGTGCTGTGTAT 59.107 47.619 0.00 0.00 0.00 2.29
2188 2332 1.324383 TCGAGACTTGGTGCTGTGTA 58.676 50.000 0.00 0.00 0.00 2.90
2189 2333 0.681733 ATCGAGACTTGGTGCTGTGT 59.318 50.000 0.00 0.00 0.00 3.72
2190 2334 1.354040 GATCGAGACTTGGTGCTGTG 58.646 55.000 0.00 0.00 0.00 3.66
2191 2335 0.109086 CGATCGAGACTTGGTGCTGT 60.109 55.000 10.26 0.00 0.00 4.40
2192 2336 0.171231 TCGATCGAGACTTGGTGCTG 59.829 55.000 15.15 0.00 0.00 4.41
2193 2337 0.171455 GTCGATCGAGACTTGGTGCT 59.829 55.000 20.09 0.00 38.09 4.40
2194 2338 1.134530 CGTCGATCGAGACTTGGTGC 61.135 60.000 20.09 2.05 42.86 5.01
2195 2339 1.134530 GCGTCGATCGAGACTTGGTG 61.135 60.000 20.09 2.43 42.86 4.17
2196 2340 1.136984 GCGTCGATCGAGACTTGGT 59.863 57.895 20.09 0.00 42.86 3.67
2197 2341 1.586564 GGCGTCGATCGAGACTTGG 60.587 63.158 20.09 5.05 42.86 3.61
2198 2342 1.934956 CGGCGTCGATCGAGACTTG 60.935 63.158 20.09 7.42 42.86 3.16
2199 2343 2.403987 CGGCGTCGATCGAGACTT 59.596 61.111 20.09 0.00 42.86 3.01
2200 2344 3.574445 CCGGCGTCGATCGAGACT 61.574 66.667 20.09 0.00 42.86 3.24
2201 2345 3.570638 TCCGGCGTCGATCGAGAC 61.571 66.667 20.09 13.77 42.86 3.36
2202 2346 3.570638 GTCCGGCGTCGATCGAGA 61.571 66.667 20.09 9.09 42.86 4.04
2203 2347 3.872728 TGTCCGGCGTCGATCGAG 61.873 66.667 20.09 13.60 42.86 4.04
2204 2348 4.170062 GTGTCCGGCGTCGATCGA 62.170 66.667 15.15 15.15 42.86 3.59
2206 2350 3.753070 GAGGTGTCCGGCGTCGATC 62.753 68.421 12.93 3.57 39.00 3.69
2207 2351 3.823330 GAGGTGTCCGGCGTCGAT 61.823 66.667 12.93 0.00 39.00 3.59
2216 2360 1.292541 GTGGTCTTCGGAGGTGTCC 59.707 63.158 0.00 0.00 39.88 4.02
2217 2361 0.319641 GTGTGGTCTTCGGAGGTGTC 60.320 60.000 0.00 0.00 0.00 3.67
2218 2362 0.759436 AGTGTGGTCTTCGGAGGTGT 60.759 55.000 0.00 0.00 0.00 4.16
2219 2363 0.393077 AAGTGTGGTCTTCGGAGGTG 59.607 55.000 0.00 0.00 0.00 4.00
2220 2364 0.680061 GAAGTGTGGTCTTCGGAGGT 59.320 55.000 0.00 0.00 35.26 3.85
2221 2365 0.037232 GGAAGTGTGGTCTTCGGAGG 60.037 60.000 0.00 0.00 43.10 4.30
2222 2366 0.679505 TGGAAGTGTGGTCTTCGGAG 59.320 55.000 0.00 0.00 43.10 4.63
2223 2367 0.391597 GTGGAAGTGTGGTCTTCGGA 59.608 55.000 0.00 0.00 43.10 4.55
2224 2368 0.105964 TGTGGAAGTGTGGTCTTCGG 59.894 55.000 0.00 0.00 43.10 4.30
2225 2369 1.068588 TCTGTGGAAGTGTGGTCTTCG 59.931 52.381 0.00 0.00 43.10 3.79
2226 2370 2.872858 GTTCTGTGGAAGTGTGGTCTTC 59.127 50.000 0.00 0.00 41.92 2.87
2227 2371 2.505819 AGTTCTGTGGAAGTGTGGTCTT 59.494 45.455 0.00 0.00 34.20 3.01
2228 2372 2.119495 AGTTCTGTGGAAGTGTGGTCT 58.881 47.619 0.00 0.00 34.20 3.85
2229 2373 2.622064 AGTTCTGTGGAAGTGTGGTC 57.378 50.000 0.00 0.00 34.20 4.02
2230 2374 2.505819 AGAAGTTCTGTGGAAGTGTGGT 59.494 45.455 4.10 0.00 35.51 4.16
2231 2375 3.134458 GAGAAGTTCTGTGGAAGTGTGG 58.866 50.000 10.90 0.00 35.51 4.17
2232 2376 4.065321 AGAGAAGTTCTGTGGAAGTGTG 57.935 45.455 10.90 0.00 35.51 3.82
2233 2377 4.080863 ACAAGAGAAGTTCTGTGGAAGTGT 60.081 41.667 10.90 4.32 35.91 3.55
2234 2378 4.446371 ACAAGAGAAGTTCTGTGGAAGTG 58.554 43.478 10.90 3.65 35.91 3.16
2235 2379 4.698575 GACAAGAGAAGTTCTGTGGAAGT 58.301 43.478 10.90 3.93 35.91 3.01
2236 2380 3.738282 CGACAAGAGAAGTTCTGTGGAAG 59.262 47.826 10.90 0.11 35.91 3.46
2237 2381 3.383505 TCGACAAGAGAAGTTCTGTGGAA 59.616 43.478 10.90 0.00 35.91 3.53
2238 2382 2.956333 TCGACAAGAGAAGTTCTGTGGA 59.044 45.455 10.90 7.20 35.91 4.02
2239 2383 3.053455 GTCGACAAGAGAAGTTCTGTGG 58.947 50.000 10.90 6.48 35.91 4.17
2240 2384 2.721603 CGTCGACAAGAGAAGTTCTGTG 59.278 50.000 17.16 10.56 35.91 3.66
2241 2385 2.859032 GCGTCGACAAGAGAAGTTCTGT 60.859 50.000 17.16 2.73 35.91 3.41
2242 2386 1.716581 GCGTCGACAAGAGAAGTTCTG 59.283 52.381 17.16 0.00 35.91 3.02
2243 2387 1.337071 TGCGTCGACAAGAGAAGTTCT 59.663 47.619 17.16 4.68 37.93 3.01
2244 2388 1.452399 GTGCGTCGACAAGAGAAGTTC 59.548 52.381 17.16 0.00 0.00 3.01
2245 2389 1.488527 GTGCGTCGACAAGAGAAGTT 58.511 50.000 17.16 0.00 0.00 2.66
2246 2390 0.318784 GGTGCGTCGACAAGAGAAGT 60.319 55.000 17.16 0.00 0.00 3.01
2247 2391 0.318699 TGGTGCGTCGACAAGAGAAG 60.319 55.000 17.16 0.00 0.00 2.85
2248 2392 0.317160 ATGGTGCGTCGACAAGAGAA 59.683 50.000 17.16 0.00 0.00 2.87
2249 2393 0.109272 GATGGTGCGTCGACAAGAGA 60.109 55.000 17.16 0.00 0.00 3.10
2250 2394 1.078759 GGATGGTGCGTCGACAAGAG 61.079 60.000 17.16 0.00 0.00 2.85
2251 2395 1.080093 GGATGGTGCGTCGACAAGA 60.080 57.895 17.16 0.00 0.00 3.02
2252 2396 1.374125 TGGATGGTGCGTCGACAAG 60.374 57.895 17.16 0.67 0.00 3.16
2253 2397 1.666553 GTGGATGGTGCGTCGACAA 60.667 57.895 17.16 0.00 30.38 3.18
2254 2398 2.048597 GTGGATGGTGCGTCGACA 60.049 61.111 17.16 0.00 30.38 4.35
2255 2399 2.781595 AAGGTGGATGGTGCGTCGAC 62.782 60.000 5.18 5.18 0.00 4.20
2256 2400 2.579657 AAGGTGGATGGTGCGTCGA 61.580 57.895 0.00 0.00 0.00 4.20
2257 2401 2.047274 AAGGTGGATGGTGCGTCG 60.047 61.111 0.00 0.00 0.00 5.12
2258 2402 1.003839 TCAAGGTGGATGGTGCGTC 60.004 57.895 0.00 0.00 0.00 5.19
2259 2403 1.003355 CTCAAGGTGGATGGTGCGT 60.003 57.895 0.00 0.00 0.00 5.24
2260 2404 2.401766 GCTCAAGGTGGATGGTGCG 61.402 63.158 0.00 0.00 0.00 5.34
2261 2405 2.401766 CGCTCAAGGTGGATGGTGC 61.402 63.158 0.00 0.00 0.00 5.01
2262 2406 2.401766 GCGCTCAAGGTGGATGGTG 61.402 63.158 0.00 0.00 0.00 4.17
2263 2407 2.045926 GCGCTCAAGGTGGATGGT 60.046 61.111 0.00 0.00 0.00 3.55
2264 2408 1.971505 TAGGCGCTCAAGGTGGATGG 61.972 60.000 7.64 0.00 0.00 3.51
2265 2409 0.107703 TTAGGCGCTCAAGGTGGATG 60.108 55.000 7.64 0.00 0.00 3.51
2266 2410 0.179000 CTTAGGCGCTCAAGGTGGAT 59.821 55.000 7.64 0.00 0.00 3.41
2267 2411 0.902984 TCTTAGGCGCTCAAGGTGGA 60.903 55.000 7.64 0.00 0.00 4.02
2268 2412 0.460987 CTCTTAGGCGCTCAAGGTGG 60.461 60.000 7.64 2.26 0.00 4.61
2269 2413 0.532573 TCTCTTAGGCGCTCAAGGTG 59.467 55.000 7.64 7.97 0.00 4.00
2270 2414 1.267121 TTCTCTTAGGCGCTCAAGGT 58.733 50.000 7.64 0.00 0.00 3.50
2271 2415 2.275318 CTTTCTCTTAGGCGCTCAAGG 58.725 52.381 7.64 5.66 0.00 3.61
2272 2416 2.670414 CACTTTCTCTTAGGCGCTCAAG 59.330 50.000 7.64 11.24 0.00 3.02
2273 2417 2.612972 CCACTTTCTCTTAGGCGCTCAA 60.613 50.000 7.64 0.02 0.00 3.02
2274 2418 1.066858 CCACTTTCTCTTAGGCGCTCA 60.067 52.381 7.64 0.00 0.00 4.26
2275 2419 1.646189 CCACTTTCTCTTAGGCGCTC 58.354 55.000 7.64 0.00 0.00 5.03
2276 2420 0.391793 GCCACTTTCTCTTAGGCGCT 60.392 55.000 7.64 0.00 35.42 5.92
2277 2421 2.090693 GCCACTTTCTCTTAGGCGC 58.909 57.895 0.00 0.00 35.42 6.53
2279 2423 2.770164 TCTGCCACTTTCTCTTAGGC 57.230 50.000 0.00 0.00 45.41 3.93
2280 2424 4.478206 TCATCTGCCACTTTCTCTTAGG 57.522 45.455 0.00 0.00 0.00 2.69
2281 2425 5.296283 CCATTCATCTGCCACTTTCTCTTAG 59.704 44.000 0.00 0.00 0.00 2.18
2282 2426 5.188434 CCATTCATCTGCCACTTTCTCTTA 58.812 41.667 0.00 0.00 0.00 2.10
2283 2427 4.015084 CCATTCATCTGCCACTTTCTCTT 58.985 43.478 0.00 0.00 0.00 2.85
2284 2428 3.618351 CCATTCATCTGCCACTTTCTCT 58.382 45.455 0.00 0.00 0.00 3.10
2285 2429 2.098770 GCCATTCATCTGCCACTTTCTC 59.901 50.000 0.00 0.00 0.00 2.87
2286 2430 2.097825 GCCATTCATCTGCCACTTTCT 58.902 47.619 0.00 0.00 0.00 2.52
2287 2431 1.820519 TGCCATTCATCTGCCACTTTC 59.179 47.619 0.00 0.00 0.00 2.62
2288 2432 1.822990 CTGCCATTCATCTGCCACTTT 59.177 47.619 0.00 0.00 0.00 2.66
2289 2433 1.471119 CTGCCATTCATCTGCCACTT 58.529 50.000 0.00 0.00 0.00 3.16
2290 2434 0.395311 CCTGCCATTCATCTGCCACT 60.395 55.000 0.00 0.00 0.00 4.00
2291 2435 0.394762 TCCTGCCATTCATCTGCCAC 60.395 55.000 0.00 0.00 0.00 5.01
2292 2436 0.394762 GTCCTGCCATTCATCTGCCA 60.395 55.000 0.00 0.00 0.00 4.92
2293 2437 0.106819 AGTCCTGCCATTCATCTGCC 60.107 55.000 0.00 0.00 0.00 4.85
2294 2438 1.307097 GAGTCCTGCCATTCATCTGC 58.693 55.000 0.00 0.00 0.00 4.26
2295 2439 1.137675 TCGAGTCCTGCCATTCATCTG 59.862 52.381 0.00 0.00 0.00 2.90
2296 2440 1.489481 TCGAGTCCTGCCATTCATCT 58.511 50.000 0.00 0.00 0.00 2.90
2297 2441 2.411904 GATCGAGTCCTGCCATTCATC 58.588 52.381 0.00 0.00 0.00 2.92
2298 2442 1.071385 GGATCGAGTCCTGCCATTCAT 59.929 52.381 6.63 0.00 44.16 2.57
2299 2443 0.465705 GGATCGAGTCCTGCCATTCA 59.534 55.000 6.63 0.00 44.16 2.57
2300 2444 3.297391 GGATCGAGTCCTGCCATTC 57.703 57.895 6.63 0.00 44.16 2.67
2309 2453 0.750850 TTCCCGGATTGGATCGAGTC 59.249 55.000 0.73 0.00 42.00 3.36
2310 2454 0.753262 CTTCCCGGATTGGATCGAGT 59.247 55.000 0.73 0.00 42.00 4.18
2311 2455 1.040646 TCTTCCCGGATTGGATCGAG 58.959 55.000 0.73 0.00 42.00 4.04
2312 2456 0.750850 GTCTTCCCGGATTGGATCGA 59.249 55.000 0.73 0.00 42.00 3.59
2313 2457 0.597637 CGTCTTCCCGGATTGGATCG 60.598 60.000 0.73 0.00 42.00 3.69
2314 2458 0.880718 GCGTCTTCCCGGATTGGATC 60.881 60.000 0.73 0.00 42.00 3.36
2315 2459 1.146263 GCGTCTTCCCGGATTGGAT 59.854 57.895 0.73 0.00 42.00 3.41
2316 2460 2.582436 GCGTCTTCCCGGATTGGA 59.418 61.111 0.73 0.00 42.00 3.53
2317 2461 2.513897 GGCGTCTTCCCGGATTGG 60.514 66.667 0.73 0.00 37.55 3.16
2318 2462 2.890474 CGGCGTCTTCCCGGATTG 60.890 66.667 0.73 0.00 41.99 2.67
2319 2463 4.832608 GCGGCGTCTTCCCGGATT 62.833 66.667 9.37 0.00 45.66 3.01
2325 2469 3.682292 ATCCAAGGCGGCGTCTTCC 62.682 63.158 25.65 8.68 33.14 3.46
2326 2470 1.706287 GAATCCAAGGCGGCGTCTTC 61.706 60.000 25.65 9.31 33.14 2.87
2327 2471 1.745489 GAATCCAAGGCGGCGTCTT 60.745 57.895 22.68 22.68 33.14 3.01
2328 2472 2.125106 GAATCCAAGGCGGCGTCT 60.125 61.111 8.88 8.88 33.14 4.18
2329 2473 2.435938 TGAATCCAAGGCGGCGTC 60.436 61.111 1.71 1.71 33.14 5.19
2330 2474 2.746277 GTGAATCCAAGGCGGCGT 60.746 61.111 9.37 0.00 33.14 5.68
2331 2475 3.508840 GGTGAATCCAAGGCGGCG 61.509 66.667 0.51 0.51 35.97 6.46
2332 2476 3.508840 CGGTGAATCCAAGGCGGC 61.509 66.667 0.00 0.00 35.57 6.53
2333 2477 2.106683 GTCGGTGAATCCAAGGCGG 61.107 63.158 0.00 0.00 35.57 6.13
2334 2478 2.452813 CGTCGGTGAATCCAAGGCG 61.453 63.158 0.00 0.00 35.57 5.52
2335 2479 1.079405 TCGTCGGTGAATCCAAGGC 60.079 57.895 0.00 0.00 35.57 4.35
2336 2480 0.739813 GGTCGTCGGTGAATCCAAGG 60.740 60.000 0.00 0.00 35.57 3.61
2337 2481 0.037697 TGGTCGTCGGTGAATCCAAG 60.038 55.000 0.00 0.00 35.57 3.61
2338 2482 2.051105 TGGTCGTCGGTGAATCCAA 58.949 52.632 0.00 0.00 35.57 3.53
2339 2483 3.780357 TGGTCGTCGGTGAATCCA 58.220 55.556 0.00 0.00 35.57 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.