Multiple sequence alignment - TraesCS7B01G463100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G463100 chr7B 100.000 4667 0 0 1 4667 720121384 720116718 0.000000e+00 8619.0
1 TraesCS7B01G463100 chr7B 98.462 130 1 1 670 798 140609404 140609533 1.310000e-55 228.0
2 TraesCS7B01G463100 chr7A 95.096 1305 50 5 1423 2715 717966360 717965058 0.000000e+00 2043.0
3 TraesCS7B01G463100 chr7A 96.960 987 30 0 2711 3697 717946882 717945896 0.000000e+00 1657.0
4 TraesCS7B01G463100 chr7A 87.822 698 42 18 2 672 717967858 717967177 0.000000e+00 778.0
5 TraesCS7B01G463100 chr7A 88.542 576 41 12 3700 4263 717945854 717945292 0.000000e+00 675.0
6 TraesCS7B01G463100 chr7A 85.867 375 37 5 795 1169 717967178 717966820 7.330000e-103 385.0
7 TraesCS7B01G463100 chr7A 89.744 234 21 2 1188 1419 717966833 717966601 3.530000e-76 296.0
8 TraesCS7B01G463100 chr7A 90.566 159 9 5 661 816 311303811 311303966 6.120000e-49 206.0
9 TraesCS7B01G463100 chr7A 92.647 68 5 0 3376 3443 732464563 732464496 1.070000e-16 99.0
10 TraesCS7B01G463100 chr5D 84.639 1966 264 20 1721 3658 559681823 559679868 0.000000e+00 1923.0
11 TraesCS7B01G463100 chr5D 84.783 92 14 0 3465 3556 556914330 556914239 4.970000e-15 93.5
12 TraesCS7B01G463100 chr5D 82.222 90 16 0 3467 3556 556923833 556923744 1.390000e-10 78.7
13 TraesCS7B01G463100 chr7D 96.324 136 3 2 668 801 150359430 150359295 6.080000e-54 222.0
14 TraesCS7B01G463100 chr3A 96.324 136 2 3 671 805 644809255 644809122 2.190000e-53 220.0
15 TraesCS7B01G463100 chr1B 95.000 140 5 2 658 796 332086470 332086332 7.860000e-53 219.0
16 TraesCS7B01G463100 chr1B 93.750 144 5 4 669 810 331040010 331040151 3.660000e-51 213.0
17 TraesCS7B01G463100 chr6D 93.197 147 6 4 663 807 9360014 9360158 3.660000e-51 213.0
18 TraesCS7B01G463100 chr6B 89.881 168 8 7 671 835 171052254 171052415 1.700000e-49 207.0
19 TraesCS7B01G463100 chr2B 88.889 171 13 5 651 815 742524963 742524793 6.120000e-49 206.0
20 TraesCS7B01G463100 chr2B 84.127 63 8 2 597 658 737867194 737867133 5.040000e-05 60.2
21 TraesCS7B01G463100 chr5B 83.696 92 15 0 3465 3556 709917683 709917774 2.310000e-13 87.9
22 TraesCS7B01G463100 chr5B 83.133 83 14 0 3474 3556 710076340 710076258 5.010000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G463100 chr7B 720116718 720121384 4666 True 8619.0 8619 100.00000 1 4667 1 chr7B.!!$R1 4666
1 TraesCS7B01G463100 chr7A 717945292 717946882 1590 True 1166.0 1657 92.75100 2711 4263 2 chr7A.!!$R2 1552
2 TraesCS7B01G463100 chr7A 717965058 717967858 2800 True 875.5 2043 89.63225 2 2715 4 chr7A.!!$R3 2713
3 TraesCS7B01G463100 chr5D 559679868 559681823 1955 True 1923.0 1923 84.63900 1721 3658 1 chr5D.!!$R3 1937

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
687 719 0.032813 AATACTCCCTCCGTCCGGAA 60.033 55.0 5.23 0.0 44.66 4.30 F
690 722 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.0 5.23 0.0 44.66 1.40 F
691 723 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.0 5.23 0.0 44.66 1.89 F
692 724 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.0 5.23 0.0 44.66 2.12 F
980 1012 0.686224 ATTGGTGGTTGCCATGTTGG 59.314 50.0 0.00 0.0 41.55 3.77 F
2867 3150 0.320697 AAGCCAAGTACTCCGTCCAC 59.679 55.0 0.00 0.0 0.00 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2518 2801 0.601558 TGAGAGGTGCACCGAAGTAC 59.398 55.0 29.68 18.15 42.08 2.73 R
2708 2991 0.323629 CCGAACCCACTTCTTAGCCA 59.676 55.0 0.00 0.00 0.00 4.75 R
2739 3022 0.984230 TGGAGAAAAGCGTCCAGGAT 59.016 50.0 0.00 0.00 37.96 3.24 R
2772 3055 0.908198 ACATCTTCTCCTCTGGCCAC 59.092 55.0 0.00 0.00 0.00 5.01 R
2950 3233 5.469421 CCTCCTCGTACTTCGTATCTAATGT 59.531 44.0 0.00 0.00 40.80 2.71 R
4270 4621 0.107459 GCTCCAAGTCAGGTGATCCC 60.107 60.0 0.00 0.00 0.00 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 3.945434 GCGAGGCATGCCGTGATG 61.945 66.667 30.50 19.43 41.95 3.07
131 132 1.826487 GGTCGGCTGTTTGGGTGTT 60.826 57.895 0.00 0.00 0.00 3.32
133 134 2.027460 CGGCTGTTTGGGTGTTGC 59.973 61.111 0.00 0.00 0.00 4.17
172 173 1.218047 GCACGCATCTAGTGTCCCA 59.782 57.895 0.00 0.00 39.40 4.37
193 194 1.059584 TCCAACCAAGCTCCACTCCA 61.060 55.000 0.00 0.00 0.00 3.86
196 197 1.352622 AACCAAGCTCCACTCCACCA 61.353 55.000 0.00 0.00 0.00 4.17
201 202 1.490574 AGCTCCACTCCACCATAGTC 58.509 55.000 0.00 0.00 0.00 2.59
202 203 1.195115 GCTCCACTCCACCATAGTCA 58.805 55.000 0.00 0.00 0.00 3.41
203 204 1.555075 GCTCCACTCCACCATAGTCAA 59.445 52.381 0.00 0.00 0.00 3.18
282 284 4.321156 GCACTGTCAAATCAGCAACCATTA 60.321 41.667 0.00 0.00 38.84 1.90
299 301 4.079787 ACCATTATCATGTGGTAGCTTGGT 60.080 41.667 3.97 0.00 46.49 3.67
326 328 4.514066 GGTACCAATATCAACCGGATGAAC 59.486 45.833 19.12 9.93 36.72 3.18
346 348 6.985117 TGAACAACAACGAGGTACTTACTAT 58.015 36.000 0.00 0.00 41.55 2.12
381 412 3.967401 TGCGTTGATCATTGCATTATGG 58.033 40.909 15.98 0.00 31.31 2.74
383 414 3.551454 GCGTTGATCATTGCATTATGGCT 60.551 43.478 13.19 0.00 34.04 4.75
384 415 3.978855 CGTTGATCATTGCATTATGGCTG 59.021 43.478 0.00 0.00 34.04 4.85
385 416 3.653539 TGATCATTGCATTATGGCTGC 57.346 42.857 0.00 0.00 40.10 5.25
386 417 3.227614 TGATCATTGCATTATGGCTGCT 58.772 40.909 0.00 0.00 40.34 4.24
417 448 2.102925 AGATTGTGTGGCCCAACTTTTG 59.897 45.455 0.00 0.00 0.00 2.44
436 467 1.982958 TGGACTACCACCTCTTTTCCC 59.017 52.381 0.00 0.00 41.77 3.97
445 476 3.751698 CCACCTCTTTTCCCGTTTAGAAG 59.248 47.826 0.00 0.00 0.00 2.85
458 489 3.323243 GTTTAGAAGGCTCAGCGTGTAA 58.677 45.455 0.00 0.00 0.00 2.41
459 490 3.887621 TTAGAAGGCTCAGCGTGTAAT 57.112 42.857 0.00 0.00 0.00 1.89
461 492 1.134670 AGAAGGCTCAGCGTGTAATCC 60.135 52.381 0.00 0.00 0.00 3.01
470 501 1.117150 GCGTGTAATCCCTAGGTCCA 58.883 55.000 8.29 0.00 0.00 4.02
554 585 8.553459 ACTGTTCTAAATCGAATGTGAGATTT 57.447 30.769 8.23 8.23 45.59 2.17
596 628 4.448537 CCCGAGATGGCAAATTTTGTTA 57.551 40.909 10.65 1.21 35.87 2.41
599 631 5.291614 CCCGAGATGGCAAATTTTGTTATTG 59.708 40.000 10.65 0.00 35.87 1.90
615 647 4.523173 TGTTATTGCCATAAAACCCGTTCA 59.477 37.500 0.00 0.00 0.00 3.18
644 676 7.894376 ACCATGCTTAAAAATTTGACATCAG 57.106 32.000 0.00 0.00 0.00 2.90
646 678 8.316214 ACCATGCTTAAAAATTTGACATCAGAT 58.684 29.630 0.00 0.00 0.00 2.90
676 708 7.937649 AGCATTTCCGTTTTTATAATACTCCC 58.062 34.615 0.00 0.00 0.00 4.30
677 709 7.778382 AGCATTTCCGTTTTTATAATACTCCCT 59.222 33.333 0.00 0.00 0.00 4.20
678 710 8.074370 GCATTTCCGTTTTTATAATACTCCCTC 58.926 37.037 0.00 0.00 0.00 4.30
679 711 8.565416 CATTTCCGTTTTTATAATACTCCCTCC 58.435 37.037 0.00 0.00 0.00 4.30
680 712 5.846203 TCCGTTTTTATAATACTCCCTCCG 58.154 41.667 0.00 0.00 0.00 4.63
681 713 5.363580 TCCGTTTTTATAATACTCCCTCCGT 59.636 40.000 0.00 0.00 0.00 4.69
682 714 5.693555 CCGTTTTTATAATACTCCCTCCGTC 59.306 44.000 0.00 0.00 0.00 4.79
683 715 5.693555 CGTTTTTATAATACTCCCTCCGTCC 59.306 44.000 0.00 0.00 0.00 4.79
684 716 5.458041 TTTTATAATACTCCCTCCGTCCG 57.542 43.478 0.00 0.00 0.00 4.79
685 717 1.920610 ATAATACTCCCTCCGTCCGG 58.079 55.000 0.00 0.00 0.00 5.14
686 718 0.846015 TAATACTCCCTCCGTCCGGA 59.154 55.000 0.00 0.00 42.90 5.14
687 719 0.032813 AATACTCCCTCCGTCCGGAA 60.033 55.000 5.23 0.00 44.66 4.30
688 720 0.032813 ATACTCCCTCCGTCCGGAAA 60.033 55.000 5.23 0.00 44.66 3.13
689 721 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
690 722 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
691 723 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
692 724 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
693 725 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
694 726 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
695 727 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
696 728 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
697 729 1.894466 TCCGTCCGGAAATACTTGTCA 59.106 47.619 5.23 0.00 42.05 3.58
698 730 2.498481 TCCGTCCGGAAATACTTGTCAT 59.502 45.455 5.23 0.00 42.05 3.06
699 731 2.864343 CCGTCCGGAAATACTTGTCATC 59.136 50.000 5.23 0.00 37.50 2.92
700 732 3.517602 CGTCCGGAAATACTTGTCATCA 58.482 45.455 5.23 0.00 0.00 3.07
701 733 3.930229 CGTCCGGAAATACTTGTCATCAA 59.070 43.478 5.23 0.00 0.00 2.57
702 734 4.390603 CGTCCGGAAATACTTGTCATCAAA 59.609 41.667 5.23 0.00 32.87 2.69
703 735 5.106869 CGTCCGGAAATACTTGTCATCAAAA 60.107 40.000 5.23 0.00 32.87 2.44
704 736 6.403200 CGTCCGGAAATACTTGTCATCAAAAT 60.403 38.462 5.23 0.00 32.87 1.82
705 737 6.747280 GTCCGGAAATACTTGTCATCAAAATG 59.253 38.462 5.23 0.00 32.87 2.32
706 738 6.035843 CCGGAAATACTTGTCATCAAAATGG 58.964 40.000 0.00 0.00 33.42 3.16
707 739 6.127758 CCGGAAATACTTGTCATCAAAATGGA 60.128 38.462 0.00 0.00 33.42 3.41
708 740 7.416664 CCGGAAATACTTGTCATCAAAATGGAT 60.417 37.037 0.00 0.00 33.42 3.41
709 741 8.620416 CGGAAATACTTGTCATCAAAATGGATA 58.380 33.333 0.00 0.00 33.42 2.59
715 747 8.421249 ACTTGTCATCAAAATGGATAAAAGGA 57.579 30.769 0.00 0.00 33.42 3.36
716 748 8.526147 ACTTGTCATCAAAATGGATAAAAGGAG 58.474 33.333 0.00 0.00 33.42 3.69
717 749 8.648698 TTGTCATCAAAATGGATAAAAGGAGA 57.351 30.769 0.00 0.00 33.42 3.71
718 750 8.827832 TGTCATCAAAATGGATAAAAGGAGAT 57.172 30.769 0.00 0.00 33.42 2.75
719 751 8.689061 TGTCATCAAAATGGATAAAAGGAGATG 58.311 33.333 0.00 0.00 33.42 2.90
720 752 7.650903 GTCATCAAAATGGATAAAAGGAGATGC 59.349 37.037 0.00 0.00 33.42 3.91
721 753 7.342541 TCATCAAAATGGATAAAAGGAGATGCA 59.657 33.333 0.00 0.00 33.42 3.96
722 754 7.664552 TCAAAATGGATAAAAGGAGATGCAT 57.335 32.000 0.00 0.00 35.84 3.96
723 755 7.719483 TCAAAATGGATAAAAGGAGATGCATC 58.281 34.615 19.37 19.37 33.50 3.91
724 756 7.562454 TCAAAATGGATAAAAGGAGATGCATCT 59.438 33.333 29.09 29.09 40.50 2.90
725 757 8.853126 CAAAATGGATAAAAGGAGATGCATCTA 58.147 33.333 28.78 12.98 37.25 1.98
726 758 8.632906 AAATGGATAAAAGGAGATGCATCTAG 57.367 34.615 28.78 0.00 37.25 2.43
727 759 7.565190 ATGGATAAAAGGAGATGCATCTAGA 57.435 36.000 28.78 10.98 37.25 2.43
728 760 6.763355 TGGATAAAAGGAGATGCATCTAGAC 58.237 40.000 28.78 20.54 37.25 2.59
729 761 5.866633 GGATAAAAGGAGATGCATCTAGACG 59.133 44.000 28.78 0.00 37.25 4.18
730 762 4.744795 AAAAGGAGATGCATCTAGACGT 57.255 40.909 28.78 16.70 37.25 4.34
731 763 5.854010 AAAAGGAGATGCATCTAGACGTA 57.146 39.130 28.78 0.00 37.25 3.57
732 764 6.412362 AAAAGGAGATGCATCTAGACGTAT 57.588 37.500 28.78 9.72 37.25 3.06
733 765 6.412362 AAAGGAGATGCATCTAGACGTATT 57.588 37.500 28.78 13.70 37.25 1.89
734 766 6.412362 AAGGAGATGCATCTAGACGTATTT 57.588 37.500 28.78 11.27 37.25 1.40
735 767 6.412362 AGGAGATGCATCTAGACGTATTTT 57.588 37.500 28.78 2.58 37.25 1.82
736 768 7.526142 AGGAGATGCATCTAGACGTATTTTA 57.474 36.000 28.78 0.00 37.25 1.52
737 769 7.598278 AGGAGATGCATCTAGACGTATTTTAG 58.402 38.462 28.78 0.00 37.25 1.85
738 770 7.231722 AGGAGATGCATCTAGACGTATTTTAGT 59.768 37.037 28.78 1.17 37.25 2.24
739 771 7.868415 GGAGATGCATCTAGACGTATTTTAGTT 59.132 37.037 28.78 0.75 37.25 2.24
740 772 8.804688 AGATGCATCTAGACGTATTTTAGTTC 57.195 34.615 27.73 0.00 34.85 3.01
741 773 8.634444 AGATGCATCTAGACGTATTTTAGTTCT 58.366 33.333 27.73 0.00 34.85 3.01
742 774 9.894783 GATGCATCTAGACGTATTTTAGTTCTA 57.105 33.333 19.70 0.00 0.00 2.10
743 775 9.900710 ATGCATCTAGACGTATTTTAGTTCTAG 57.099 33.333 0.00 0.00 0.00 2.43
744 776 9.117183 TGCATCTAGACGTATTTTAGTTCTAGA 57.883 33.333 8.64 8.64 38.94 2.43
772 804 9.246670 ACATCTCTTTTATCCATTTTGATGACA 57.753 29.630 0.00 0.00 34.62 3.58
775 807 9.300681 TCTCTTTTATCCATTTTGATGACAAGT 57.699 29.630 0.00 0.00 37.32 3.16
782 814 8.915871 ATCCATTTTGATGACAAGTATTTTCG 57.084 30.769 0.00 0.00 37.32 3.46
783 815 7.312154 TCCATTTTGATGACAAGTATTTTCGG 58.688 34.615 0.00 0.00 37.32 4.30
784 816 7.175816 TCCATTTTGATGACAAGTATTTTCGGA 59.824 33.333 0.00 0.00 37.32 4.55
785 817 7.273381 CCATTTTGATGACAAGTATTTTCGGAC 59.727 37.037 0.00 0.00 37.32 4.79
786 818 5.524511 TTGATGACAAGTATTTTCGGACG 57.475 39.130 0.00 0.00 0.00 4.79
787 819 3.930229 TGATGACAAGTATTTTCGGACGG 59.070 43.478 0.00 0.00 0.00 4.79
788 820 3.663995 TGACAAGTATTTTCGGACGGA 57.336 42.857 0.00 0.00 0.00 4.69
789 821 3.581755 TGACAAGTATTTTCGGACGGAG 58.418 45.455 0.00 0.00 0.00 4.63
790 822 2.928116 GACAAGTATTTTCGGACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
791 823 2.277084 CAAGTATTTTCGGACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
792 824 1.856629 AGTATTTTCGGACGGAGGGA 58.143 50.000 0.00 0.00 0.00 4.20
793 825 1.755380 AGTATTTTCGGACGGAGGGAG 59.245 52.381 0.00 0.00 0.00 4.30
794 826 1.479730 GTATTTTCGGACGGAGGGAGT 59.520 52.381 0.00 0.00 0.00 3.85
795 827 1.856629 ATTTTCGGACGGAGGGAGTA 58.143 50.000 0.00 0.00 0.00 2.59
802 834 3.072915 TCGGACGGAGGGAGTATGTATTA 59.927 47.826 0.00 0.00 0.00 0.98
810 842 6.209986 CGGAGGGAGTATGTATTACATTGGTA 59.790 42.308 14.23 0.00 39.88 3.25
850 882 8.794553 AGATATAAGTGTGAGACCTATAAACGG 58.205 37.037 0.00 0.00 0.00 4.44
856 888 3.808174 GTGAGACCTATAAACGGGAATGC 59.192 47.826 0.00 0.00 0.00 3.56
857 889 3.057734 GAGACCTATAAACGGGAATGCG 58.942 50.000 0.00 0.00 0.00 4.73
859 891 1.202722 ACCTATAAACGGGAATGCGGG 60.203 52.381 0.00 0.00 0.00 6.13
888 920 5.768164 AGTTTTTAGTTAGGCTAGCTTTGCA 59.232 36.000 16.28 0.00 0.00 4.08
910 942 5.618195 GCAATTCATTGGTTTGCTTCATTGG 60.618 40.000 13.71 0.00 41.86 3.16
923 955 3.264947 CTTCATTGGCAGAGTGAATCGA 58.735 45.455 10.92 0.00 32.05 3.59
940 972 3.402628 TCGAAAGAAGCTAAGGTTGCT 57.597 42.857 0.00 0.00 43.32 3.91
953 985 3.694043 AGGTTGCTTTTGTTTGGTTGT 57.306 38.095 0.00 0.00 0.00 3.32
959 991 2.287644 GCTTTTGTTTGGTTGTCATGCC 59.712 45.455 0.00 0.00 0.00 4.40
961 993 3.616956 TTTGTTTGGTTGTCATGCCAA 57.383 38.095 5.55 5.55 42.38 4.52
980 1012 0.686224 ATTGGTGGTTGCCATGTTGG 59.314 50.000 0.00 0.00 41.55 3.77
981 1013 0.689080 TTGGTGGTTGCCATGTTGGT 60.689 50.000 0.00 0.00 40.46 3.67
1012 1044 0.899717 TGTGCAAATGAGGCTTCCCC 60.900 55.000 0.00 0.00 0.00 4.81
1023 1055 1.303643 GCTTCCCCCAAGTGAGTGG 60.304 63.158 0.00 0.00 38.51 4.00
1034 1066 3.057315 CCAAGTGAGTGGCATTGGTAAAG 60.057 47.826 8.35 0.00 37.90 1.85
1047 1079 7.233757 TGGCATTGGTAAAGTACTAATTTGGTT 59.766 33.333 0.00 0.00 37.71 3.67
1050 1082 9.840427 CATTGGTAAAGTACTAATTTGGTTCAG 57.160 33.333 0.00 0.00 37.71 3.02
1062 1094 8.082242 ACTAATTTGGTTCAGTGATTTTAGTGC 58.918 33.333 0.00 0.00 0.00 4.40
1145 1177 3.700038 TGCCAGTTAGTAGTCTAGGCTTC 59.300 47.826 0.11 0.00 36.54 3.86
1148 1180 4.398673 CCAGTTAGTAGTCTAGGCTTCGTT 59.601 45.833 0.11 0.00 0.00 3.85
1158 1190 2.990066 AGGCTTCGTTTCCTAGATGG 57.010 50.000 0.00 0.00 37.10 3.51
1159 1191 1.134371 AGGCTTCGTTTCCTAGATGGC 60.134 52.381 0.00 0.00 37.36 4.40
1160 1192 1.134371 GGCTTCGTTTCCTAGATGGCT 60.134 52.381 0.00 0.00 35.31 4.75
1161 1193 2.102588 GGCTTCGTTTCCTAGATGGCTA 59.897 50.000 0.00 0.00 35.31 3.93
1162 1194 3.124560 GCTTCGTTTCCTAGATGGCTAC 58.875 50.000 0.00 0.00 35.26 3.58
1163 1195 3.430374 GCTTCGTTTCCTAGATGGCTACA 60.430 47.826 0.00 0.00 35.26 2.74
1164 1196 4.740934 GCTTCGTTTCCTAGATGGCTACAT 60.741 45.833 0.00 0.00 40.85 2.29
1165 1197 5.353394 TTCGTTTCCTAGATGGCTACATT 57.647 39.130 0.00 0.00 37.47 2.71
1166 1198 4.945246 TCGTTTCCTAGATGGCTACATTC 58.055 43.478 0.00 0.00 37.47 2.67
1167 1199 4.649674 TCGTTTCCTAGATGGCTACATTCT 59.350 41.667 0.00 0.00 37.47 2.40
1168 1200 5.128827 TCGTTTCCTAGATGGCTACATTCTT 59.871 40.000 0.00 0.00 37.47 2.52
1169 1201 5.817816 CGTTTCCTAGATGGCTACATTCTTT 59.182 40.000 0.00 0.00 37.47 2.52
1170 1202 6.316390 CGTTTCCTAGATGGCTACATTCTTTT 59.684 38.462 0.00 0.00 37.47 2.27
1171 1203 7.148239 CGTTTCCTAGATGGCTACATTCTTTTT 60.148 37.037 0.00 0.00 37.47 1.94
1203 1235 3.687572 GCAGATGGCTACATTCTTGTG 57.312 47.619 0.00 0.00 37.47 3.33
1227 1259 7.637132 GTGTATTATTATTTGTTCGTTGGTCGG 59.363 37.037 0.00 0.00 40.32 4.79
1233 1265 1.008329 TGTTCGTTGGTCGGAACAAC 58.992 50.000 25.30 25.30 36.99 3.32
1241 1273 1.501337 GGTCGGAACAACGGTGGTTC 61.501 60.000 18.19 18.19 42.99 3.62
1257 1289 7.396418 ACGGTGGTTCTTTTCTATAATAACCA 58.604 34.615 0.00 0.00 42.94 3.67
1330 1364 7.582667 AGCAGTTACCAAAATCTTAGTTGTT 57.417 32.000 0.00 0.00 0.00 2.83
1349 1383 7.107542 AGTTGTTTAGTTACCTGAGTGTTCAA 58.892 34.615 0.00 0.00 31.69 2.69
1364 1398 3.616219 TGTTCAACAAACAGCTACCAGT 58.384 40.909 0.00 0.00 42.95 4.00
1366 1400 2.571212 TCAACAAACAGCTACCAGTGG 58.429 47.619 7.91 7.91 0.00 4.00
1408 1442 1.739466 ACATTGCCACAATGTCTAGCG 59.261 47.619 17.82 0.00 36.18 4.26
1416 1450 4.180817 CCACAATGTCTAGCGAACATACA 58.819 43.478 2.72 0.00 36.35 2.29
1419 1453 4.180817 CAATGTCTAGCGAACATACACCA 58.819 43.478 2.72 0.00 36.35 4.17
1420 1454 3.945981 TGTCTAGCGAACATACACCAA 57.054 42.857 0.00 0.00 0.00 3.67
1421 1455 4.465632 TGTCTAGCGAACATACACCAAT 57.534 40.909 0.00 0.00 0.00 3.16
1428 1699 4.750098 AGCGAACATACACCAATATAGTGC 59.250 41.667 5.86 0.00 38.87 4.40
1473 1744 8.594881 ACTAATGTAGTTATATGCAGCTGTTC 57.405 34.615 16.64 0.00 34.86 3.18
1477 1748 4.760530 AGTTATATGCAGCTGTTCAGGA 57.239 40.909 16.64 0.00 0.00 3.86
1570 1845 8.830201 CAATTTATTTTGGACCATGAGTTCAA 57.170 30.769 0.00 0.00 42.55 2.69
1572 1847 9.657419 AATTTATTTTGGACCATGAGTTCAATC 57.343 29.630 8.36 0.00 43.73 2.67
1577 1852 3.285484 GGACCATGAGTTCAATCTGCAT 58.715 45.455 0.00 0.00 0.00 3.96
1595 1870 2.227388 GCATGCAAACTAGTTGAGCACT 59.773 45.455 28.09 18.31 39.87 4.40
1689 1964 6.358118 TGTCGTTTTCATTGATATACCTGC 57.642 37.500 0.00 0.00 0.00 4.85
1830 2105 1.352156 CTGGTAGCCTTCGACAACGC 61.352 60.000 0.00 0.00 39.58 4.84
1946 2221 2.670934 CACCACCCAGCTGACAGC 60.671 66.667 20.12 20.12 42.84 4.40
2166 2441 3.368843 GCATCTTTATGTTTGTTGCTGGC 59.631 43.478 0.00 0.00 35.38 4.85
2178 2453 4.963276 TGTTGCTGGCATCATTAAGTAC 57.037 40.909 2.66 0.00 0.00 2.73
2187 2462 3.321111 GCATCATTAAGTACGGGGAGAGA 59.679 47.826 0.00 0.00 0.00 3.10
2206 2481 2.760650 AGAACGATGGCTCTCATGTACA 59.239 45.455 0.00 0.00 35.97 2.90
2208 2483 2.103373 ACGATGGCTCTCATGTACAGT 58.897 47.619 0.33 0.00 35.97 3.55
2274 2549 3.692257 AGGTTGACTCATCCAGAACTG 57.308 47.619 8.57 0.00 0.00 3.16
2289 2564 1.691434 GAACTGGAGGAGGATGCTAGG 59.309 57.143 0.00 0.00 36.27 3.02
2323 2598 9.651913 GCATTATTAGTTTTTCCTTGGATTCAA 57.348 29.630 0.00 0.00 0.00 2.69
2328 2603 4.278419 AGTTTTTCCTTGGATTCAACTCCG 59.722 41.667 0.00 0.00 38.21 4.63
2384 2659 1.839994 CCAGATACCAGAAGGCTTCCA 59.160 52.381 23.09 7.22 39.06 3.53
2400 2675 2.064434 TCCATGCAACAACTTGGACA 57.936 45.000 0.20 0.00 38.55 4.02
2454 2737 2.086610 AGTTGGCCAAGTTGGTTGAT 57.913 45.000 21.21 3.60 40.46 2.57
2455 2738 1.688197 AGTTGGCCAAGTTGGTTGATG 59.312 47.619 21.21 0.00 40.46 3.07
2460 2743 2.554344 GGCCAAGTTGGTTGATGTAGGA 60.554 50.000 22.85 0.00 40.46 2.94
2518 2801 2.892425 GGACAAGGAGCGGCATCG 60.892 66.667 1.45 0.00 39.81 3.84
2619 2902 1.995484 AGAGTCGACATTGCAATCACG 59.005 47.619 19.50 21.28 0.00 4.35
2708 2991 1.077716 GGACGTGGGCTTGGCTTAT 60.078 57.895 0.00 0.00 0.00 1.73
2737 3020 4.373116 GGGTTCGGCTCACTCGCA 62.373 66.667 0.00 0.00 0.00 5.10
2739 3022 1.141019 GGTTCGGCTCACTCGCATA 59.859 57.895 0.00 0.00 0.00 3.14
2772 3055 6.202954 CGCTTTTCTCCAGTAATACTATTGGG 59.797 42.308 0.00 0.00 35.95 4.12
2867 3150 0.320697 AAGCCAAGTACTCCGTCCAC 59.679 55.000 0.00 0.00 0.00 4.02
2950 3233 6.031751 ACAAGTTGTTTTGGTTAAGCAAGA 57.968 33.333 18.60 12.76 37.58 3.02
3005 3288 6.092092 CGGATATCACAGATAGCTTTCTGAG 58.908 44.000 32.60 26.33 44.88 3.35
3110 3399 8.191446 GGCAAGGGAATTTTCTAGAGATTTTAC 58.809 37.037 0.00 0.00 0.00 2.01
3392 3696 5.366768 AGTTGATATCGAAGGAGGATTCCAA 59.633 40.000 5.29 0.00 46.64 3.53
3405 3709 2.893489 GGATTCCAAGTTGTCTTTGCCT 59.107 45.455 1.45 0.00 0.00 4.75
3500 3804 2.747460 GCCAGAGACGCATGCCAA 60.747 61.111 13.15 0.00 0.00 4.52
3629 3933 3.447229 CCTAATTTTGGGCCTTACAGTGG 59.553 47.826 4.53 0.00 0.00 4.00
3698 4002 3.998913 TGCCATCATCTGAGGTAAACA 57.001 42.857 0.00 0.00 0.00 2.83
3810 4153 7.683437 ATCATCAACCACATATATCTGCTTG 57.317 36.000 0.00 0.00 0.00 4.01
3886 4229 1.834822 ATAGTGAGAGCTCGGGGGC 60.835 63.158 8.37 0.00 0.00 5.80
3914 4257 1.176527 CCGCATGACCCAACTTCATT 58.823 50.000 0.00 0.00 30.98 2.57
3922 4265 7.255242 CGCATGACCCAACTTCATTTATTATCT 60.255 37.037 0.00 0.00 30.98 1.98
3945 4288 2.229792 TGTTCACACTTCCCTGCAATC 58.770 47.619 0.00 0.00 0.00 2.67
3948 4291 2.507484 TCACACTTCCCTGCAATCTTG 58.493 47.619 0.00 0.00 0.00 3.02
3979 4322 8.985315 ACTAAGCTTGATGATTTTGGATGATA 57.015 30.769 9.86 0.00 0.00 2.15
3984 4327 8.920174 AGCTTGATGATTTTGGATGATATTCAA 58.080 29.630 0.00 0.00 0.00 2.69
4010 4353 4.377021 TGCCTTAGTTAATCATGGCTACG 58.623 43.478 13.74 0.00 40.82 3.51
4011 4354 4.141801 TGCCTTAGTTAATCATGGCTACGT 60.142 41.667 13.74 0.00 40.82 3.57
4035 4378 7.374491 CGTAGTTGTTAATACGGCTACTTACTC 59.626 40.741 0.00 0.00 40.74 2.59
4043 4386 7.401955 AATACGGCTACTTACTCAAAGTACT 57.598 36.000 0.00 0.00 46.85 2.73
4060 4403 7.338449 TCAAAGTACTTGTTGGATAATTAGGCC 59.662 37.037 9.34 0.00 36.34 5.19
4123 4466 7.017645 GCAAATTATTAGCATGTGTATCTCCG 58.982 38.462 0.00 0.00 0.00 4.63
4129 4472 1.541015 GCATGTGTATCTCCGGCATGA 60.541 52.381 17.00 7.04 39.21 3.07
4145 4488 8.094798 TCCGGCATGATAGATTATTTAAACAC 57.905 34.615 0.00 0.00 0.00 3.32
4203 4554 5.183228 ACTAAAAATAGGTCGGGTCATGTG 58.817 41.667 0.00 0.00 0.00 3.21
4214 4565 2.463752 GGGTCATGTGGTACCTAGTGA 58.536 52.381 14.36 11.06 35.97 3.41
4228 4579 6.821665 GGTACCTAGTGATAGTTTGCAAATGA 59.178 38.462 16.21 6.80 0.00 2.57
4236 4587 6.371548 GTGATAGTTTGCAAATGAGGTAGTCA 59.628 38.462 16.21 8.57 40.38 3.41
4240 4591 6.476378 AGTTTGCAAATGAGGTAGTCATAGT 58.524 36.000 16.21 0.00 45.89 2.12
4243 4594 5.804639 TGCAAATGAGGTAGTCATAGTTGT 58.195 37.500 0.00 0.00 45.89 3.32
4246 4597 6.149474 GCAAATGAGGTAGTCATAGTTGTTGT 59.851 38.462 0.00 0.00 45.89 3.32
4272 4623 2.069273 CGAAGCTGTTGTTGTAGAGGG 58.931 52.381 0.00 0.00 0.00 4.30
4273 4624 2.288825 CGAAGCTGTTGTTGTAGAGGGA 60.289 50.000 0.00 0.00 0.00 4.20
4274 4625 3.617531 CGAAGCTGTTGTTGTAGAGGGAT 60.618 47.826 0.00 0.00 0.00 3.85
4275 4626 3.618690 AGCTGTTGTTGTAGAGGGATC 57.381 47.619 0.00 0.00 0.00 3.36
4276 4627 2.906389 AGCTGTTGTTGTAGAGGGATCA 59.094 45.455 0.00 0.00 0.00 2.92
4277 4628 3.003480 GCTGTTGTTGTAGAGGGATCAC 58.997 50.000 0.00 0.00 0.00 3.06
4278 4629 3.600388 CTGTTGTTGTAGAGGGATCACC 58.400 50.000 0.00 0.00 40.67 4.02
4289 4640 0.107459 GGGATCACCTGACTTGGAGC 60.107 60.000 0.00 0.00 35.85 4.70
4290 4641 0.908198 GGATCACCTGACTTGGAGCT 59.092 55.000 0.00 0.00 0.00 4.09
4291 4642 1.134551 GGATCACCTGACTTGGAGCTC 60.135 57.143 4.71 4.71 0.00 4.09
4292 4643 1.552337 GATCACCTGACTTGGAGCTCA 59.448 52.381 17.19 0.00 0.00 4.26
4293 4644 1.423584 TCACCTGACTTGGAGCTCAA 58.576 50.000 17.19 0.00 0.00 3.02
4305 4656 5.489792 TTGGAGCTCAAGACTTACTCATT 57.510 39.130 17.19 0.00 0.00 2.57
4306 4657 6.605471 TTGGAGCTCAAGACTTACTCATTA 57.395 37.500 17.19 0.00 0.00 1.90
4307 4658 6.605471 TGGAGCTCAAGACTTACTCATTAA 57.395 37.500 17.19 0.00 0.00 1.40
4308 4659 7.004555 TGGAGCTCAAGACTTACTCATTAAA 57.995 36.000 17.19 0.00 0.00 1.52
4309 4660 7.099764 TGGAGCTCAAGACTTACTCATTAAAG 58.900 38.462 17.19 0.00 0.00 1.85
4310 4661 7.039011 TGGAGCTCAAGACTTACTCATTAAAGA 60.039 37.037 17.19 0.00 0.00 2.52
4311 4662 7.819900 GGAGCTCAAGACTTACTCATTAAAGAA 59.180 37.037 17.19 0.00 0.00 2.52
4312 4663 8.770438 AGCTCAAGACTTACTCATTAAAGAAG 57.230 34.615 0.00 0.00 0.00 2.85
4313 4664 8.589338 AGCTCAAGACTTACTCATTAAAGAAGA 58.411 33.333 0.00 0.00 0.00 2.87
4314 4665 8.652463 GCTCAAGACTTACTCATTAAAGAAGAC 58.348 37.037 0.00 0.00 0.00 3.01
4315 4666 9.698309 CTCAAGACTTACTCATTAAAGAAGACA 57.302 33.333 0.00 0.00 0.00 3.41
4332 4683 8.627208 AAGAAGACATAAAGAGAAATGCTTGA 57.373 30.769 0.00 0.00 0.00 3.02
4333 4684 8.804912 AGAAGACATAAAGAGAAATGCTTGAT 57.195 30.769 0.00 0.00 0.00 2.57
4334 4685 9.240734 AGAAGACATAAAGAGAAATGCTTGATT 57.759 29.630 0.00 0.00 0.00 2.57
4335 4686 9.286946 GAAGACATAAAGAGAAATGCTTGATTG 57.713 33.333 0.00 0.00 0.00 2.67
4336 4687 8.571461 AGACATAAAGAGAAATGCTTGATTGA 57.429 30.769 0.00 0.00 0.00 2.57
4337 4688 8.457261 AGACATAAAGAGAAATGCTTGATTGAC 58.543 33.333 0.00 0.00 0.00 3.18
4338 4689 8.114331 ACATAAAGAGAAATGCTTGATTGACA 57.886 30.769 0.00 0.00 0.00 3.58
4339 4690 8.579006 ACATAAAGAGAAATGCTTGATTGACAA 58.421 29.630 0.00 0.00 36.97 3.18
4340 4691 9.582431 CATAAAGAGAAATGCTTGATTGACAAT 57.418 29.630 0.00 0.00 37.88 2.71
4343 4694 9.582431 AAAGAGAAATGCTTGATTGACAATATG 57.418 29.630 0.00 0.00 37.88 1.78
4344 4695 8.289939 AGAGAAATGCTTGATTGACAATATGT 57.710 30.769 0.00 0.00 37.88 2.29
4360 4711 8.713765 GACAATATGTCTTACAATAATTGCCG 57.286 34.615 3.31 0.00 43.73 5.69
4361 4712 7.648142 ACAATATGTCTTACAATAATTGCCGG 58.352 34.615 0.00 0.00 33.67 6.13
4362 4713 7.500892 ACAATATGTCTTACAATAATTGCCGGA 59.499 33.333 5.05 0.00 33.67 5.14
4363 4714 8.514594 CAATATGTCTTACAATAATTGCCGGAT 58.485 33.333 5.05 0.00 0.00 4.18
4364 4715 5.749596 TGTCTTACAATAATTGCCGGATG 57.250 39.130 5.05 0.00 0.00 3.51
4365 4716 4.036262 TGTCTTACAATAATTGCCGGATGC 59.964 41.667 5.05 0.00 41.77 3.91
4366 4717 3.249799 TCTTACAATAATTGCCGGATGCG 59.750 43.478 5.05 0.00 45.60 4.73
4367 4718 1.674359 ACAATAATTGCCGGATGCGA 58.326 45.000 8.71 0.00 45.60 5.10
4368 4719 2.020720 ACAATAATTGCCGGATGCGAA 58.979 42.857 8.71 0.00 45.60 4.70
4369 4720 2.425312 ACAATAATTGCCGGATGCGAAA 59.575 40.909 8.71 2.31 45.60 3.46
4370 4721 2.774439 ATAATTGCCGGATGCGAAAC 57.226 45.000 8.71 0.00 45.60 2.78
4371 4722 0.375454 TAATTGCCGGATGCGAAACG 59.625 50.000 8.71 0.00 45.60 3.60
4372 4723 1.302383 AATTGCCGGATGCGAAACGA 61.302 50.000 8.71 0.00 45.60 3.85
4373 4724 1.095228 ATTGCCGGATGCGAAACGAT 61.095 50.000 8.71 0.00 45.60 3.73
4374 4725 1.302383 TTGCCGGATGCGAAACGATT 61.302 50.000 8.71 0.00 45.60 3.34
4375 4726 0.460459 TGCCGGATGCGAAACGATTA 60.460 50.000 8.71 0.00 45.60 1.75
4376 4727 0.865769 GCCGGATGCGAAACGATTAT 59.134 50.000 8.71 0.00 0.00 1.28
4377 4728 2.063266 GCCGGATGCGAAACGATTATA 58.937 47.619 8.71 0.00 0.00 0.98
4378 4729 2.477375 GCCGGATGCGAAACGATTATAA 59.523 45.455 8.71 0.00 0.00 0.98
4379 4730 3.423123 GCCGGATGCGAAACGATTATAAG 60.423 47.826 8.71 0.00 0.00 1.73
4380 4731 3.739300 CCGGATGCGAAACGATTATAAGT 59.261 43.478 8.71 0.00 0.00 2.24
4381 4732 4.919168 CCGGATGCGAAACGATTATAAGTA 59.081 41.667 8.71 0.00 0.00 2.24
4382 4733 5.575606 CCGGATGCGAAACGATTATAAGTAT 59.424 40.000 8.71 0.00 0.00 2.12
4383 4734 6.237490 CCGGATGCGAAACGATTATAAGTATC 60.237 42.308 8.71 0.00 0.00 2.24
4384 4735 6.307077 CGGATGCGAAACGATTATAAGTATCA 59.693 38.462 0.00 0.00 0.00 2.15
4385 4736 7.009265 CGGATGCGAAACGATTATAAGTATCAT 59.991 37.037 0.00 0.00 0.00 2.45
4386 4737 8.656849 GGATGCGAAACGATTATAAGTATCATT 58.343 33.333 0.00 0.00 0.00 2.57
4403 4754 8.859236 AGTATCATTAACATGGAGATGGATTG 57.141 34.615 0.00 0.00 33.39 2.67
4404 4755 8.443176 AGTATCATTAACATGGAGATGGATTGT 58.557 33.333 0.00 0.00 33.39 2.71
4405 4756 9.071276 GTATCATTAACATGGAGATGGATTGTT 57.929 33.333 0.00 0.00 33.39 2.83
4406 4757 7.337480 TCATTAACATGGAGATGGATTGTTG 57.663 36.000 0.00 0.00 33.39 3.33
4407 4758 6.891361 TCATTAACATGGAGATGGATTGTTGT 59.109 34.615 0.00 0.00 33.39 3.32
4408 4759 6.757897 TTAACATGGAGATGGATTGTTGTC 57.242 37.500 0.00 0.00 33.39 3.18
4409 4760 4.581309 ACATGGAGATGGATTGTTGTCT 57.419 40.909 0.00 0.00 33.39 3.41
4410 4761 4.521146 ACATGGAGATGGATTGTTGTCTC 58.479 43.478 0.00 0.00 37.08 3.36
4411 4762 4.019051 ACATGGAGATGGATTGTTGTCTCA 60.019 41.667 0.00 0.00 39.02 3.27
4412 4763 4.849813 TGGAGATGGATTGTTGTCTCAT 57.150 40.909 0.00 0.00 39.02 2.90
4413 4764 5.183530 TGGAGATGGATTGTTGTCTCATT 57.816 39.130 0.00 0.00 39.02 2.57
4414 4765 5.188434 TGGAGATGGATTGTTGTCTCATTC 58.812 41.667 0.00 0.00 39.02 2.67
4415 4766 4.272018 GGAGATGGATTGTTGTCTCATTCG 59.728 45.833 0.00 0.00 39.02 3.34
4416 4767 3.624861 AGATGGATTGTTGTCTCATTCGC 59.375 43.478 0.00 0.00 0.00 4.70
4417 4768 3.057969 TGGATTGTTGTCTCATTCGCT 57.942 42.857 0.00 0.00 0.00 4.93
4418 4769 3.002791 TGGATTGTTGTCTCATTCGCTC 58.997 45.455 0.00 0.00 0.00 5.03
4419 4770 3.002791 GGATTGTTGTCTCATTCGCTCA 58.997 45.455 0.00 0.00 0.00 4.26
4420 4771 3.181516 GGATTGTTGTCTCATTCGCTCAC 60.182 47.826 0.00 0.00 0.00 3.51
4421 4772 2.820059 TGTTGTCTCATTCGCTCACT 57.180 45.000 0.00 0.00 0.00 3.41
4422 4773 2.677199 TGTTGTCTCATTCGCTCACTC 58.323 47.619 0.00 0.00 0.00 3.51
4423 4774 1.651138 GTTGTCTCATTCGCTCACTCG 59.349 52.381 0.00 0.00 0.00 4.18
4424 4775 1.165270 TGTCTCATTCGCTCACTCGA 58.835 50.000 0.00 0.00 36.60 4.04
4425 4776 1.745653 TGTCTCATTCGCTCACTCGAT 59.254 47.619 0.00 0.00 38.37 3.59
4426 4777 2.943033 TGTCTCATTCGCTCACTCGATA 59.057 45.455 0.00 0.00 38.37 2.92
4427 4778 3.565902 TGTCTCATTCGCTCACTCGATAT 59.434 43.478 0.00 0.00 38.37 1.63
4428 4779 4.036852 TGTCTCATTCGCTCACTCGATATT 59.963 41.667 0.00 0.00 38.37 1.28
4429 4780 4.381270 GTCTCATTCGCTCACTCGATATTG 59.619 45.833 0.00 0.00 38.37 1.90
4430 4781 3.642705 TCATTCGCTCACTCGATATTGG 58.357 45.455 0.00 0.00 38.37 3.16
4431 4782 3.068165 TCATTCGCTCACTCGATATTGGT 59.932 43.478 0.00 0.00 38.37 3.67
4432 4783 3.520290 TTCGCTCACTCGATATTGGTT 57.480 42.857 0.00 0.00 38.37 3.67
4433 4784 2.809446 TCGCTCACTCGATATTGGTTG 58.191 47.619 0.00 0.00 33.02 3.77
4434 4785 2.425668 TCGCTCACTCGATATTGGTTGA 59.574 45.455 0.00 0.00 33.02 3.18
4435 4786 2.535984 CGCTCACTCGATATTGGTTGAC 59.464 50.000 0.00 0.00 0.00 3.18
4436 4787 3.521560 GCTCACTCGATATTGGTTGACA 58.478 45.455 0.00 0.00 0.00 3.58
4437 4788 3.553511 GCTCACTCGATATTGGTTGACAG 59.446 47.826 0.00 0.00 0.00 3.51
4438 4789 4.678044 GCTCACTCGATATTGGTTGACAGA 60.678 45.833 0.00 0.00 0.00 3.41
4439 4790 5.595885 CTCACTCGATATTGGTTGACAGAT 58.404 41.667 0.00 0.00 0.00 2.90
4440 4791 5.592054 TCACTCGATATTGGTTGACAGATC 58.408 41.667 0.00 0.00 0.00 2.75
4441 4792 4.442403 CACTCGATATTGGTTGACAGATCG 59.558 45.833 0.00 0.00 42.99 3.69
4442 4793 4.338400 ACTCGATATTGGTTGACAGATCGA 59.662 41.667 12.59 12.59 45.52 3.59
4443 4794 5.163550 ACTCGATATTGGTTGACAGATCGAA 60.164 40.000 13.57 3.72 46.21 3.71
4444 4795 5.041287 TCGATATTGGTTGACAGATCGAAC 58.959 41.667 11.47 0.00 45.12 3.95
4445 4796 4.803613 CGATATTGGTTGACAGATCGAACA 59.196 41.667 0.00 0.00 43.69 3.18
4446 4797 5.051441 CGATATTGGTTGACAGATCGAACAG 60.051 44.000 0.00 0.00 43.69 3.16
4447 4798 3.469008 TTGGTTGACAGATCGAACAGT 57.531 42.857 0.00 0.00 37.24 3.55
4448 4799 3.469008 TGGTTGACAGATCGAACAGTT 57.531 42.857 0.00 0.00 30.29 3.16
4449 4800 3.130633 TGGTTGACAGATCGAACAGTTG 58.869 45.455 0.00 0.00 30.29 3.16
4450 4801 2.480419 GGTTGACAGATCGAACAGTTGG 59.520 50.000 0.00 0.00 0.00 3.77
4451 4802 1.795768 TGACAGATCGAACAGTTGGC 58.204 50.000 0.00 0.00 0.00 4.52
4452 4803 1.344438 TGACAGATCGAACAGTTGGCT 59.656 47.619 0.00 0.00 0.00 4.75
4453 4804 2.560981 TGACAGATCGAACAGTTGGCTA 59.439 45.455 0.00 0.00 0.00 3.93
4454 4805 3.182967 GACAGATCGAACAGTTGGCTAG 58.817 50.000 0.00 0.00 0.00 3.42
4455 4806 2.563179 ACAGATCGAACAGTTGGCTAGT 59.437 45.455 0.00 0.00 0.00 2.57
4456 4807 3.006967 ACAGATCGAACAGTTGGCTAGTT 59.993 43.478 0.00 0.00 0.00 2.24
4457 4808 3.369147 CAGATCGAACAGTTGGCTAGTTG 59.631 47.826 0.00 0.00 0.00 3.16
4458 4809 3.258372 AGATCGAACAGTTGGCTAGTTGA 59.742 43.478 0.00 0.00 0.00 3.18
4459 4810 2.750948 TCGAACAGTTGGCTAGTTGAC 58.249 47.619 0.00 0.00 0.00 3.18
4460 4811 2.364324 TCGAACAGTTGGCTAGTTGACT 59.636 45.455 0.00 0.00 0.00 3.41
4461 4812 2.476619 CGAACAGTTGGCTAGTTGACTG 59.523 50.000 15.39 15.39 43.81 3.51
4462 4813 2.550830 ACAGTTGGCTAGTTGACTGG 57.449 50.000 18.90 0.00 42.81 4.00
4463 4814 1.768870 ACAGTTGGCTAGTTGACTGGT 59.231 47.619 18.90 7.85 42.81 4.00
4464 4815 2.224305 ACAGTTGGCTAGTTGACTGGTC 60.224 50.000 18.90 0.00 42.81 4.02
4465 4816 2.047061 AGTTGGCTAGTTGACTGGTCA 58.953 47.619 0.00 0.00 37.29 4.02
4466 4817 2.438021 AGTTGGCTAGTTGACTGGTCAA 59.562 45.455 9.99 9.99 44.81 3.18
4478 4829 6.582677 TTGACTGGTCAACTTTTGAAAAGA 57.417 33.333 23.14 0.00 43.90 2.52
4479 4830 6.582677 TGACTGGTCAACTTTTGAAAAGAA 57.417 33.333 23.14 6.40 42.15 2.52
4480 4831 6.987386 TGACTGGTCAACTTTTGAAAAGAAA 58.013 32.000 23.14 6.07 42.15 2.52
4481 4832 7.610865 TGACTGGTCAACTTTTGAAAAGAAAT 58.389 30.769 23.14 7.04 42.15 2.17
4482 4833 7.759433 TGACTGGTCAACTTTTGAAAAGAAATC 59.241 33.333 23.14 9.21 42.15 2.17
4483 4834 7.041721 ACTGGTCAACTTTTGAAAAGAAATCC 58.958 34.615 23.14 17.74 42.15 3.01
4484 4835 6.345298 TGGTCAACTTTTGAAAAGAAATCCC 58.655 36.000 23.14 14.99 42.15 3.85
4485 4836 5.758296 GGTCAACTTTTGAAAAGAAATCCCC 59.242 40.000 23.14 11.06 42.15 4.81
4486 4837 5.758296 GTCAACTTTTGAAAAGAAATCCCCC 59.242 40.000 23.14 0.73 42.15 5.40
4487 4838 5.426833 TCAACTTTTGAAAAGAAATCCCCCA 59.573 36.000 23.14 0.00 36.59 4.96
4488 4839 5.966853 ACTTTTGAAAAGAAATCCCCCAA 57.033 34.783 23.14 0.00 0.00 4.12
4489 4840 6.320434 ACTTTTGAAAAGAAATCCCCCAAA 57.680 33.333 23.14 0.00 0.00 3.28
4490 4841 6.726379 ACTTTTGAAAAGAAATCCCCCAAAA 58.274 32.000 23.14 0.00 33.04 2.44
4491 4842 7.178573 ACTTTTGAAAAGAAATCCCCCAAAAA 58.821 30.769 23.14 0.00 33.48 1.94
4543 4894 9.702494 ATCTTCATGAAAATTGAAAGAAAGTCC 57.298 29.630 9.88 0.00 32.98 3.85
4544 4895 8.694540 TCTTCATGAAAATTGAAAGAAAGTCCA 58.305 29.630 9.88 0.00 32.98 4.02
4545 4896 8.647143 TTCATGAAAATTGAAAGAAAGTCCAC 57.353 30.769 5.45 0.00 30.44 4.02
4546 4897 7.780064 TCATGAAAATTGAAAGAAAGTCCACA 58.220 30.769 0.00 0.00 0.00 4.17
4547 4898 8.256605 TCATGAAAATTGAAAGAAAGTCCACAA 58.743 29.630 0.00 0.00 0.00 3.33
4548 4899 8.881743 CATGAAAATTGAAAGAAAGTCCACAAA 58.118 29.630 0.00 0.00 0.00 2.83
4549 4900 8.250538 TGAAAATTGAAAGAAAGTCCACAAAC 57.749 30.769 0.00 0.00 0.00 2.93
4550 4901 8.093927 TGAAAATTGAAAGAAAGTCCACAAACT 58.906 29.630 0.00 0.00 0.00 2.66
4551 4902 8.846943 AAAATTGAAAGAAAGTCCACAAACTT 57.153 26.923 0.00 0.00 41.20 2.66
4552 4903 9.936759 AAAATTGAAAGAAAGTCCACAAACTTA 57.063 25.926 0.00 0.00 38.52 2.24
4553 4904 9.936759 AAATTGAAAGAAAGTCCACAAACTTAA 57.063 25.926 0.00 0.00 38.52 1.85
4554 4905 9.936759 AATTGAAAGAAAGTCCACAAACTTAAA 57.063 25.926 0.00 0.00 38.52 1.52
4555 4906 9.936759 ATTGAAAGAAAGTCCACAAACTTAAAA 57.063 25.926 0.00 0.00 38.52 1.52
4556 4907 9.765795 TTGAAAGAAAGTCCACAAACTTAAAAA 57.234 25.926 0.00 0.00 38.52 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.195442 TCGCCATGTGGGGTAAGTCA 61.195 55.000 14.74 0.00 46.93 3.41
131 132 2.192861 CACTTGGCAAGGAACGGCA 61.193 57.895 29.26 0.00 35.33 5.69
133 134 2.644992 GCACTTGGCAAGGAACGG 59.355 61.111 29.26 14.58 43.97 4.44
172 173 0.398318 GAGTGGAGCTTGGTTGGAGT 59.602 55.000 0.00 0.00 0.00 3.85
193 194 4.455606 GCATTCTAAGCCTTGACTATGGT 58.544 43.478 0.00 0.00 0.00 3.55
282 284 3.084039 CAACACCAAGCTACCACATGAT 58.916 45.455 0.00 0.00 0.00 2.45
299 301 3.263681 TCCGGTTGATATTGGTACCAACA 59.736 43.478 29.35 19.71 40.26 3.33
310 312 4.094294 CGTTGTTGTTCATCCGGTTGATAT 59.906 41.667 15.80 0.00 30.56 1.63
319 321 3.660865 AGTACCTCGTTGTTGTTCATCC 58.339 45.455 0.00 0.00 0.00 3.51
326 328 5.105635 TGGGATAGTAAGTACCTCGTTGTTG 60.106 44.000 0.00 0.00 0.00 3.33
381 412 2.433970 ACAATCTTCCTAGAGGAGCAGC 59.566 50.000 0.00 0.00 46.36 5.25
383 414 3.196469 CACACAATCTTCCTAGAGGAGCA 59.804 47.826 0.00 0.00 46.36 4.26
384 415 3.431486 CCACACAATCTTCCTAGAGGAGC 60.431 52.174 0.00 0.00 46.36 4.70
385 416 3.431486 GCCACACAATCTTCCTAGAGGAG 60.431 52.174 0.00 0.00 46.36 3.69
386 417 2.501723 GCCACACAATCTTCCTAGAGGA 59.498 50.000 0.00 0.00 43.73 3.71
417 448 1.066358 CGGGAAAAGAGGTGGTAGTCC 60.066 57.143 0.00 0.00 0.00 3.85
419 450 1.725803 ACGGGAAAAGAGGTGGTAGT 58.274 50.000 0.00 0.00 0.00 2.73
436 467 0.716108 CACGCTGAGCCTTCTAAACG 59.284 55.000 0.00 0.00 0.00 3.60
445 476 0.750850 TAGGGATTACACGCTGAGCC 59.249 55.000 0.00 0.00 34.93 4.70
458 489 5.789574 TGTTAATTTGTGGACCTAGGGAT 57.210 39.130 14.81 0.00 0.00 3.85
459 490 5.586155 TTGTTAATTTGTGGACCTAGGGA 57.414 39.130 14.81 0.00 0.00 4.20
461 492 6.488683 TGAGTTTGTTAATTTGTGGACCTAGG 59.511 38.462 7.41 7.41 0.00 3.02
521 552 9.965824 ACATTCGATTTAGAACAGTCAATTTTT 57.034 25.926 0.00 0.00 32.39 1.94
522 553 9.398170 CACATTCGATTTAGAACAGTCAATTTT 57.602 29.630 0.00 0.00 32.39 1.82
523 554 8.783093 TCACATTCGATTTAGAACAGTCAATTT 58.217 29.630 0.00 0.00 32.39 1.82
524 555 8.322906 TCACATTCGATTTAGAACAGTCAATT 57.677 30.769 0.00 0.00 32.39 2.32
554 585 5.814705 CGGGCATTTAATTTCCATGCTAAAA 59.185 36.000 13.06 0.00 42.55 1.52
558 589 3.030291 TCGGGCATTTAATTTCCATGCT 58.970 40.909 13.06 0.00 42.55 3.79
596 628 4.817318 AATGAACGGGTTTTATGGCAAT 57.183 36.364 0.00 0.00 0.00 3.56
599 631 4.865925 GGTAAAATGAACGGGTTTTATGGC 59.134 41.667 0.00 0.00 33.76 4.40
604 636 4.039852 AGCATGGTAAAATGAACGGGTTTT 59.960 37.500 0.00 0.00 0.00 2.43
608 640 3.866883 AAGCATGGTAAAATGAACGGG 57.133 42.857 0.00 0.00 0.00 5.28
653 685 8.565416 GGAGGGAGTATTATAAAAACGGAAATG 58.435 37.037 0.00 0.00 0.00 2.32
672 704 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
673 705 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
674 706 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
675 707 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
676 708 2.094390 TGACAAGTATTTCCGGACGGAG 60.094 50.000 13.64 3.15 46.06 4.63
677 709 1.894466 TGACAAGTATTTCCGGACGGA 59.106 47.619 1.83 9.76 43.52 4.69
678 710 2.373540 TGACAAGTATTTCCGGACGG 57.626 50.000 1.83 3.96 0.00 4.79
679 711 3.517602 TGATGACAAGTATTTCCGGACG 58.482 45.455 1.83 0.00 0.00 4.79
680 712 5.873179 TTTGATGACAAGTATTTCCGGAC 57.127 39.130 1.83 0.00 37.32 4.79
681 713 6.127758 CCATTTTGATGACAAGTATTTCCGGA 60.128 38.462 0.00 0.00 37.32 5.14
682 714 6.035843 CCATTTTGATGACAAGTATTTCCGG 58.964 40.000 0.00 0.00 37.32 5.14
683 715 6.851609 TCCATTTTGATGACAAGTATTTCCG 58.148 36.000 0.00 0.00 37.32 4.30
689 721 9.527157 TCCTTTTATCCATTTTGATGACAAGTA 57.473 29.630 0.00 0.00 37.32 2.24
690 722 8.421249 TCCTTTTATCCATTTTGATGACAAGT 57.579 30.769 0.00 0.00 37.32 3.16
691 723 8.742777 TCTCCTTTTATCCATTTTGATGACAAG 58.257 33.333 0.00 0.00 37.32 3.16
692 724 8.648698 TCTCCTTTTATCCATTTTGATGACAA 57.351 30.769 0.00 0.00 0.00 3.18
693 725 8.689061 CATCTCCTTTTATCCATTTTGATGACA 58.311 33.333 0.00 0.00 32.05 3.58
694 726 7.650903 GCATCTCCTTTTATCCATTTTGATGAC 59.349 37.037 0.00 0.00 32.05 3.06
695 727 7.342541 TGCATCTCCTTTTATCCATTTTGATGA 59.657 33.333 0.00 0.00 32.05 2.92
696 728 7.494211 TGCATCTCCTTTTATCCATTTTGATG 58.506 34.615 0.00 0.00 0.00 3.07
697 729 7.664552 TGCATCTCCTTTTATCCATTTTGAT 57.335 32.000 0.00 0.00 0.00 2.57
698 730 7.562454 AGATGCATCTCCTTTTATCCATTTTGA 59.438 33.333 23.75 0.00 29.30 2.69
699 731 7.723324 AGATGCATCTCCTTTTATCCATTTTG 58.277 34.615 23.75 0.00 29.30 2.44
700 732 7.909485 AGATGCATCTCCTTTTATCCATTTT 57.091 32.000 23.75 0.00 29.30 1.82
701 733 8.443176 TCTAGATGCATCTCCTTTTATCCATTT 58.557 33.333 31.92 5.86 38.32 2.32
702 734 7.882271 GTCTAGATGCATCTCCTTTTATCCATT 59.118 37.037 31.92 6.52 38.32 3.16
703 735 7.393216 GTCTAGATGCATCTCCTTTTATCCAT 58.607 38.462 31.92 6.97 38.32 3.41
704 736 6.517362 CGTCTAGATGCATCTCCTTTTATCCA 60.517 42.308 31.92 10.19 38.32 3.41
705 737 5.866633 CGTCTAGATGCATCTCCTTTTATCC 59.133 44.000 31.92 10.14 38.32 2.59
706 738 6.451393 ACGTCTAGATGCATCTCCTTTTATC 58.549 40.000 31.92 13.49 38.32 1.75
707 739 6.412362 ACGTCTAGATGCATCTCCTTTTAT 57.588 37.500 31.92 9.21 38.32 1.40
708 740 5.854010 ACGTCTAGATGCATCTCCTTTTA 57.146 39.130 31.92 13.14 38.32 1.52
709 741 4.744795 ACGTCTAGATGCATCTCCTTTT 57.255 40.909 31.92 12.72 38.32 2.27
710 742 6.412362 AATACGTCTAGATGCATCTCCTTT 57.588 37.500 31.92 15.94 38.32 3.11
711 743 6.412362 AAATACGTCTAGATGCATCTCCTT 57.588 37.500 31.92 16.52 38.32 3.36
712 744 6.412362 AAAATACGTCTAGATGCATCTCCT 57.588 37.500 31.92 12.27 38.32 3.69
713 745 7.371936 ACTAAAATACGTCTAGATGCATCTCC 58.628 38.462 31.92 19.17 38.32 3.71
714 746 8.804688 AACTAAAATACGTCTAGATGCATCTC 57.195 34.615 31.92 17.14 38.32 2.75
715 747 8.634444 AGAACTAAAATACGTCTAGATGCATCT 58.366 33.333 30.85 30.85 40.86 2.90
716 748 8.804688 AGAACTAAAATACGTCTAGATGCATC 57.195 34.615 19.37 19.37 0.00 3.91
717 749 9.900710 CTAGAACTAAAATACGTCTAGATGCAT 57.099 33.333 12.04 0.00 0.00 3.96
718 750 9.117183 TCTAGAACTAAAATACGTCTAGATGCA 57.883 33.333 12.04 0.00 32.48 3.96
746 778 9.246670 TGTCATCAAAATGGATAAAAGAGATGT 57.753 29.630 0.00 0.00 33.83 3.06
749 781 9.300681 ACTTGTCATCAAAATGGATAAAAGAGA 57.699 29.630 0.00 0.00 33.42 3.10
757 789 7.975616 CCGAAAATACTTGTCATCAAAATGGAT 59.024 33.333 0.00 0.00 33.42 3.41
758 790 7.175816 TCCGAAAATACTTGTCATCAAAATGGA 59.824 33.333 0.00 0.00 33.42 3.41
759 791 7.273381 GTCCGAAAATACTTGTCATCAAAATGG 59.727 37.037 0.00 0.00 33.42 3.16
760 792 7.007367 CGTCCGAAAATACTTGTCATCAAAATG 59.993 37.037 0.00 0.00 32.87 2.32
761 793 7.021196 CGTCCGAAAATACTTGTCATCAAAAT 58.979 34.615 0.00 0.00 32.87 1.82
762 794 6.367421 CGTCCGAAAATACTTGTCATCAAAA 58.633 36.000 0.00 0.00 32.87 2.44
763 795 5.106869 CCGTCCGAAAATACTTGTCATCAAA 60.107 40.000 0.00 0.00 32.87 2.69
764 796 4.390603 CCGTCCGAAAATACTTGTCATCAA 59.609 41.667 0.00 0.00 0.00 2.57
765 797 3.930229 CCGTCCGAAAATACTTGTCATCA 59.070 43.478 0.00 0.00 0.00 3.07
766 798 4.178540 TCCGTCCGAAAATACTTGTCATC 58.821 43.478 0.00 0.00 0.00 2.92
767 799 4.181578 CTCCGTCCGAAAATACTTGTCAT 58.818 43.478 0.00 0.00 0.00 3.06
768 800 3.581755 CTCCGTCCGAAAATACTTGTCA 58.418 45.455 0.00 0.00 0.00 3.58
769 801 2.928116 CCTCCGTCCGAAAATACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
770 802 2.354403 CCCTCCGTCCGAAAATACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
771 803 2.093869 TCCCTCCGTCCGAAAATACTTG 60.094 50.000 0.00 0.00 0.00 3.16
772 804 2.167900 CTCCCTCCGTCCGAAAATACTT 59.832 50.000 0.00 0.00 0.00 2.24
773 805 1.755380 CTCCCTCCGTCCGAAAATACT 59.245 52.381 0.00 0.00 0.00 2.12
774 806 1.479730 ACTCCCTCCGTCCGAAAATAC 59.520 52.381 0.00 0.00 0.00 1.89
775 807 1.856629 ACTCCCTCCGTCCGAAAATA 58.143 50.000 0.00 0.00 0.00 1.40
776 808 1.856629 TACTCCCTCCGTCCGAAAAT 58.143 50.000 0.00 0.00 0.00 1.82
777 809 1.479323 CATACTCCCTCCGTCCGAAAA 59.521 52.381 0.00 0.00 0.00 2.29
778 810 1.108776 CATACTCCCTCCGTCCGAAA 58.891 55.000 0.00 0.00 0.00 3.46
779 811 0.033796 ACATACTCCCTCCGTCCGAA 60.034 55.000 0.00 0.00 0.00 4.30
780 812 0.839277 TACATACTCCCTCCGTCCGA 59.161 55.000 0.00 0.00 0.00 4.55
781 813 1.906990 ATACATACTCCCTCCGTCCG 58.093 55.000 0.00 0.00 0.00 4.79
782 814 4.147321 TGTAATACATACTCCCTCCGTCC 58.853 47.826 0.00 0.00 35.42 4.79
783 815 5.979288 ATGTAATACATACTCCCTCCGTC 57.021 43.478 3.75 0.00 36.99 4.79
784 816 5.011738 CCAATGTAATACATACTCCCTCCGT 59.988 44.000 6.30 0.00 37.97 4.69
785 817 5.011738 ACCAATGTAATACATACTCCCTCCG 59.988 44.000 6.30 0.00 37.97 4.63
786 818 6.435292 ACCAATGTAATACATACTCCCTCC 57.565 41.667 6.30 0.00 37.97 4.30
835 867 3.491964 CGCATTCCCGTTTATAGGTCTCA 60.492 47.826 0.00 0.00 0.00 3.27
837 869 2.224209 CCGCATTCCCGTTTATAGGTCT 60.224 50.000 0.00 0.00 0.00 3.85
839 871 1.202722 CCCGCATTCCCGTTTATAGGT 60.203 52.381 0.00 0.00 0.00 3.08
843 875 0.179029 CTCCCCGCATTCCCGTTTAT 60.179 55.000 0.00 0.00 0.00 1.40
849 881 0.255033 AAACTACTCCCCGCATTCCC 59.745 55.000 0.00 0.00 0.00 3.97
850 882 2.124277 AAAACTACTCCCCGCATTCC 57.876 50.000 0.00 0.00 0.00 3.01
856 888 4.081254 AGCCTAACTAAAAACTACTCCCCG 60.081 45.833 0.00 0.00 0.00 5.73
857 889 5.432680 AGCCTAACTAAAAACTACTCCCC 57.567 43.478 0.00 0.00 0.00 4.81
859 891 6.876155 AGCTAGCCTAACTAAAAACTACTCC 58.124 40.000 12.13 0.00 0.00 3.85
888 920 4.456566 GCCAATGAAGCAAACCAATGAATT 59.543 37.500 0.00 0.00 0.00 2.17
910 942 2.999355 AGCTTCTTTCGATTCACTCTGC 59.001 45.455 0.00 0.00 0.00 4.26
940 972 3.616956 TGGCATGACAACCAAACAAAA 57.383 38.095 0.00 0.00 31.46 2.44
941 973 3.616956 TTGGCATGACAACCAAACAAA 57.383 38.095 10.79 0.00 42.87 2.83
959 991 2.144730 CAACATGGCAACCACCAATTG 58.855 47.619 0.00 0.00 44.65 2.32
961 993 0.686224 CCAACATGGCAACCACCAAT 59.314 50.000 0.00 0.00 44.65 3.16
968 1000 4.236935 CAACTATCAACCAACATGGCAAC 58.763 43.478 0.00 0.00 42.67 4.17
1007 1039 1.434513 ATGCCACTCACTTGGGGGAA 61.435 55.000 0.00 0.00 37.10 3.97
1012 1044 2.198827 TACCAATGCCACTCACTTGG 57.801 50.000 0.00 0.00 38.34 3.61
1023 1055 8.301002 TGAACCAAATTAGTACTTTACCAATGC 58.699 33.333 0.00 0.00 0.00 3.56
1047 1079 7.977789 TTATGAACAGCACTAAAATCACTGA 57.022 32.000 0.00 0.00 32.67 3.41
1102 1134 9.710900 CTGGCATATTTGTCTGTAAGTATCATA 57.289 33.333 0.00 0.00 33.76 2.15
1103 1135 8.213679 ACTGGCATATTTGTCTGTAAGTATCAT 58.786 33.333 0.00 0.00 37.79 2.45
1104 1136 7.564793 ACTGGCATATTTGTCTGTAAGTATCA 58.435 34.615 0.00 0.00 37.79 2.15
1105 1137 8.438676 AACTGGCATATTTGTCTGTAAGTATC 57.561 34.615 1.05 0.00 38.51 2.24
1106 1138 9.547753 CTAACTGGCATATTTGTCTGTAAGTAT 57.452 33.333 1.05 0.00 38.51 2.12
1107 1139 8.537016 ACTAACTGGCATATTTGTCTGTAAGTA 58.463 33.333 1.05 0.00 38.51 2.24
1108 1140 7.394816 ACTAACTGGCATATTTGTCTGTAAGT 58.605 34.615 1.05 0.00 38.51 2.24
1109 1141 7.849804 ACTAACTGGCATATTTGTCTGTAAG 57.150 36.000 1.05 0.00 38.51 2.34
1110 1142 8.537016 ACTACTAACTGGCATATTTGTCTGTAA 58.463 33.333 1.05 0.00 38.51 2.41
1111 1143 8.074613 ACTACTAACTGGCATATTTGTCTGTA 57.925 34.615 1.05 0.00 38.51 2.74
1112 1144 6.947464 ACTACTAACTGGCATATTTGTCTGT 58.053 36.000 0.00 0.00 40.83 3.41
1113 1145 7.268586 AGACTACTAACTGGCATATTTGTCTG 58.731 38.462 0.00 0.00 33.09 3.51
1114 1146 7.425224 AGACTACTAACTGGCATATTTGTCT 57.575 36.000 0.00 0.00 0.00 3.41
1118 1150 6.555360 AGCCTAGACTACTAACTGGCATATTT 59.445 38.462 9.98 0.00 38.85 1.40
1123 1155 3.383698 AGCCTAGACTACTAACTGGCA 57.616 47.619 9.98 0.00 38.85 4.92
1145 1177 4.950050 AGAATGTAGCCATCTAGGAAACG 58.050 43.478 0.00 0.00 41.22 3.60
1183 1215 3.012518 ACACAAGAATGTAGCCATCTGC 58.987 45.455 0.00 0.00 37.82 4.26
1184 1216 6.932356 AATACACAAGAATGTAGCCATCTG 57.068 37.500 0.00 0.00 38.43 2.90
1203 1235 7.908230 TCCGACCAACGAACAAATAATAATAC 58.092 34.615 0.00 0.00 45.77 1.89
1219 1251 1.644913 CACCGTTGTTCCGACCAAC 59.355 57.895 0.00 0.00 39.01 3.77
1227 1259 5.684550 ATAGAAAAGAACCACCGTTGTTC 57.315 39.130 7.28 7.28 41.89 3.18
1257 1289 9.268282 TCCTACCACTTAAAGAATCAGATAACT 57.732 33.333 0.00 0.00 0.00 2.24
1307 1341 9.394477 CTAAACAACTAAGATTTTGGTAACTGC 57.606 33.333 0.00 0.00 37.61 4.40
1330 1364 6.879993 TGTTTGTTGAACACTCAGGTAACTAA 59.120 34.615 0.00 0.00 44.75 2.24
1336 1370 2.423538 GCTGTTTGTTGAACACTCAGGT 59.576 45.455 21.61 0.00 43.13 4.00
1341 1375 3.616219 TGGTAGCTGTTTGTTGAACACT 58.384 40.909 0.00 0.00 43.13 3.55
1349 1383 1.202770 GGACCACTGGTAGCTGTTTGT 60.203 52.381 0.00 3.01 35.25 2.83
1388 1422 1.739466 CGCTAGACATTGTGGCAATGT 59.261 47.619 22.50 22.50 42.98 2.71
1389 1423 2.009051 TCGCTAGACATTGTGGCAATG 58.991 47.619 17.23 17.23 0.00 2.82
1394 1428 4.032900 GTGTATGTTCGCTAGACATTGTGG 59.967 45.833 0.00 0.00 0.00 4.17
1397 1431 4.180817 TGGTGTATGTTCGCTAGACATTG 58.819 43.478 0.00 0.00 0.00 2.82
1406 1440 4.084013 GGCACTATATTGGTGTATGTTCGC 60.084 45.833 9.29 0.00 37.07 4.70
1408 1442 5.373222 TGGGCACTATATTGGTGTATGTTC 58.627 41.667 9.29 0.00 37.07 3.18
1416 1450 3.435026 GGTGACATGGGCACTATATTGGT 60.435 47.826 17.07 0.00 36.53 3.67
1419 1453 3.201930 TGTGGTGACATGGGCACTATATT 59.798 43.478 17.07 0.00 46.14 1.28
1420 1454 2.777114 TGTGGTGACATGGGCACTATAT 59.223 45.455 17.07 0.00 46.14 0.86
1421 1455 2.192263 TGTGGTGACATGGGCACTATA 58.808 47.619 17.07 9.41 46.14 1.31
1446 1717 7.726216 ACAGCTGCATATAACTACATTAGTCA 58.274 34.615 15.27 0.00 38.26 3.41
1462 1733 0.251033 TGCTTCCTGAACAGCTGCAT 60.251 50.000 15.27 2.22 36.92 3.96
1463 1734 0.251033 ATGCTTCCTGAACAGCTGCA 60.251 50.000 15.27 3.44 36.92 4.41
1473 1744 2.513753 TGTGGTGGTAAATGCTTCCTG 58.486 47.619 0.00 0.00 0.00 3.86
1477 1748 5.543507 TTGAATTGTGGTGGTAAATGCTT 57.456 34.783 0.00 0.00 0.00 3.91
1555 1826 2.040145 TGCAGATTGAACTCATGGTCCA 59.960 45.455 0.00 0.00 0.00 4.02
1570 1845 3.128242 GCTCAACTAGTTTGCATGCAGAT 59.872 43.478 21.50 13.02 34.88 2.90
1572 1847 2.227149 TGCTCAACTAGTTTGCATGCAG 59.773 45.455 21.50 11.44 33.69 4.41
1577 1852 4.703897 AGTAAGTGCTCAACTAGTTTGCA 58.296 39.130 22.02 22.02 38.56 4.08
1605 1880 5.867903 ATTTGGGTGTTGACATTTCTTCA 57.132 34.783 0.00 0.00 0.00 3.02
1606 1881 8.655651 TTTTATTTGGGTGTTGACATTTCTTC 57.344 30.769 0.00 0.00 0.00 2.87
1639 1914 5.491070 AGGTGTGATCTTCATCAAATCGAA 58.509 37.500 0.00 0.00 40.90 3.71
1641 1916 6.908870 TTAGGTGTGATCTTCATCAAATCG 57.091 37.500 0.00 0.00 40.90 3.34
1649 1924 5.147330 ACGACATTTAGGTGTGATCTTCA 57.853 39.130 0.00 0.00 31.16 3.02
1815 2090 2.126228 CCGCGTTGTCGAAGGCTA 60.126 61.111 4.92 0.00 40.19 3.93
1830 2105 1.659098 CCACTAAGAAACTTAGCGCCG 59.341 52.381 2.29 0.00 0.00 6.46
1946 2221 2.863809 AGAAAGCTAGTGGGTGGTTTG 58.136 47.619 0.00 0.00 34.60 2.93
1983 2258 0.807496 GTCCACCAAGATGAAGCAGC 59.193 55.000 0.00 0.00 0.00 5.25
2166 2441 5.290386 GTTCTCTCCCCGTACTTAATGATG 58.710 45.833 0.00 0.00 0.00 3.07
2178 2453 2.107141 GCCATCGTTCTCTCCCCG 59.893 66.667 0.00 0.00 0.00 5.73
2187 2462 2.497675 ACTGTACATGAGAGCCATCGTT 59.502 45.455 0.00 0.00 31.94 3.85
2206 2481 4.760204 GCCACTGATGTTTTGTAGGTTACT 59.240 41.667 0.00 0.00 0.00 2.24
2208 2483 4.980573 AGCCACTGATGTTTTGTAGGTTA 58.019 39.130 0.00 0.00 0.00 2.85
2274 2549 2.109304 AGAGTACCTAGCATCCTCCTCC 59.891 54.545 0.00 0.00 0.00 4.30
2328 2603 5.810587 TCCAGCAAATAAGTGTCGAACTATC 59.189 40.000 0.00 0.00 38.56 2.08
2384 2659 2.034124 AGCTTGTCCAAGTTGTTGCAT 58.966 42.857 8.69 0.00 40.45 3.96
2400 2675 3.740631 TGATGTGATCGAGCATAGCTT 57.259 42.857 16.36 0.00 39.88 3.74
2454 2737 7.795047 AGACATCACAATACATGATTCCTACA 58.205 34.615 0.00 0.00 34.49 2.74
2455 2738 9.935241 ATAGACATCACAATACATGATTCCTAC 57.065 33.333 0.00 0.00 34.49 3.18
2518 2801 0.601558 TGAGAGGTGCACCGAAGTAC 59.398 55.000 29.68 18.15 42.08 2.73
2708 2991 0.323629 CCGAACCCACTTCTTAGCCA 59.676 55.000 0.00 0.00 0.00 4.75
2737 3020 2.771943 TGGAGAAAAGCGTCCAGGATAT 59.228 45.455 0.00 0.00 37.96 1.63
2739 3022 0.984230 TGGAGAAAAGCGTCCAGGAT 59.016 50.000 0.00 0.00 37.96 3.24
2772 3055 0.908198 ACATCTTCTCCTCTGGCCAC 59.092 55.000 0.00 0.00 0.00 5.01
2950 3233 5.469421 CCTCCTCGTACTTCGTATCTAATGT 59.531 44.000 0.00 0.00 40.80 2.71
3159 3448 3.576078 TCCACATCCACACTTGAAACT 57.424 42.857 0.00 0.00 0.00 2.66
3392 3696 2.435372 TGGTTCAGGCAAAGACAACT 57.565 45.000 0.00 0.00 0.00 3.16
3405 3709 3.181477 CCAGTGTTTCTTTGCATGGTTCA 60.181 43.478 0.00 0.00 0.00 3.18
3498 3802 1.073722 TCCTCTGGCCAGCTGTTTG 59.926 57.895 28.91 11.67 0.00 2.93
3500 3804 2.753029 GTCCTCTGGCCAGCTGTT 59.247 61.111 28.91 0.00 0.00 3.16
3629 3933 3.052036 TCAAAGGCGTAACTTCGTACAC 58.948 45.455 0.00 0.00 0.00 2.90
3779 4122 9.797642 AGATATATGTGGTTGATGATAAAAGCA 57.202 29.630 0.00 0.00 0.00 3.91
3829 4172 7.124448 ACCGATCTAAGGAAAGAAACAGTAGAT 59.876 37.037 0.00 0.00 31.25 1.98
3834 4177 5.351740 GGAACCGATCTAAGGAAAGAAACAG 59.648 44.000 0.00 0.00 0.00 3.16
3890 4233 2.672651 TTGGGTCATGCGGCACAG 60.673 61.111 4.03 0.56 0.00 3.66
3894 4237 1.315257 ATGAAGTTGGGTCATGCGGC 61.315 55.000 0.00 0.00 34.40 6.53
3914 4257 9.613428 CAGGGAAGTGTGAACATAAGATAATAA 57.387 33.333 0.00 0.00 0.00 1.40
3922 4265 3.500448 TGCAGGGAAGTGTGAACATAA 57.500 42.857 0.00 0.00 0.00 1.90
3979 4322 8.582437 CCATGATTAACTAAGGCATGATTGAAT 58.418 33.333 0.00 0.00 35.60 2.57
3984 4327 5.638133 AGCCATGATTAACTAAGGCATGAT 58.362 37.500 11.85 0.00 44.34 2.45
4010 4353 8.184192 TGAGTAAGTAGCCGTATTAACAACTAC 58.816 37.037 0.00 0.00 35.43 2.73
4011 4354 8.279970 TGAGTAAGTAGCCGTATTAACAACTA 57.720 34.615 0.00 0.00 0.00 2.24
4035 4378 7.122055 TGGCCTAATTATCCAACAAGTACTTTG 59.878 37.037 5.07 2.68 42.68 2.77
4043 4386 6.041865 CCATGAATGGCCTAATTATCCAACAA 59.958 38.462 3.32 1.57 41.75 2.83
4102 4445 5.178797 GCCGGAGATACACATGCTAATAAT 58.821 41.667 5.05 0.00 0.00 1.28
4103 4446 4.039852 TGCCGGAGATACACATGCTAATAA 59.960 41.667 5.05 0.00 0.00 1.40
4106 4449 1.760029 TGCCGGAGATACACATGCTAA 59.240 47.619 5.05 0.00 0.00 3.09
4107 4450 1.408969 TGCCGGAGATACACATGCTA 58.591 50.000 5.05 0.00 0.00 3.49
4108 4451 0.761187 ATGCCGGAGATACACATGCT 59.239 50.000 5.05 0.00 0.00 3.79
4109 4452 0.870393 CATGCCGGAGATACACATGC 59.130 55.000 5.05 0.00 32.54 4.06
4110 4453 2.531522 TCATGCCGGAGATACACATG 57.468 50.000 5.05 7.71 39.53 3.21
4111 4454 4.089361 TCTATCATGCCGGAGATACACAT 58.911 43.478 5.05 0.00 0.00 3.21
4112 4455 3.496331 TCTATCATGCCGGAGATACACA 58.504 45.455 5.05 0.00 0.00 3.72
4117 4460 9.167311 GTTTAAATAATCTATCATGCCGGAGAT 57.833 33.333 5.05 7.75 0.00 2.75
4119 4462 8.230486 GTGTTTAAATAATCTATCATGCCGGAG 58.770 37.037 5.05 0.00 0.00 4.63
4123 4466 9.630098 CATGGTGTTTAAATAATCTATCATGCC 57.370 33.333 0.00 0.00 0.00 4.40
4145 4488 4.304537 TGTGTGATGTTGTTGTTCATGG 57.695 40.909 0.00 0.00 0.00 3.66
4154 4497 4.218852 TGATTGATGCATGTGTGATGTTGT 59.781 37.500 2.46 0.00 0.00 3.32
4203 4554 6.821665 TCATTTGCAAACTATCACTAGGTACC 59.178 38.462 15.41 2.73 0.00 3.34
4214 4565 8.267894 ACTATGACTACCTCATTTGCAAACTAT 58.732 33.333 15.41 0.00 40.38 2.12
4228 4579 5.127356 GCCTCTACAACAACTATGACTACCT 59.873 44.000 0.00 0.00 0.00 3.08
4236 4587 3.195825 AGCTTCGCCTCTACAACAACTAT 59.804 43.478 0.00 0.00 0.00 2.12
4240 4591 1.070134 ACAGCTTCGCCTCTACAACAA 59.930 47.619 0.00 0.00 0.00 2.83
4243 4594 1.070134 ACAACAGCTTCGCCTCTACAA 59.930 47.619 0.00 0.00 0.00 2.41
4246 4597 1.070134 ACAACAACAGCTTCGCCTCTA 59.930 47.619 0.00 0.00 0.00 2.43
4263 4614 3.474798 AGTCAGGTGATCCCTCTACAA 57.525 47.619 0.13 0.00 43.86 2.41
4264 4615 3.099905 CAAGTCAGGTGATCCCTCTACA 58.900 50.000 0.13 0.00 43.86 2.74
4265 4616 2.432510 CCAAGTCAGGTGATCCCTCTAC 59.567 54.545 0.13 3.03 43.86 2.59
4266 4617 2.314852 TCCAAGTCAGGTGATCCCTCTA 59.685 50.000 0.13 0.00 43.86 2.43
4267 4618 1.079490 TCCAAGTCAGGTGATCCCTCT 59.921 52.381 0.13 0.00 43.86 3.69
4268 4619 1.484240 CTCCAAGTCAGGTGATCCCTC 59.516 57.143 0.13 0.00 43.86 4.30
4270 4621 0.107459 GCTCCAAGTCAGGTGATCCC 60.107 60.000 0.00 0.00 0.00 3.85
4271 4622 0.908198 AGCTCCAAGTCAGGTGATCC 59.092 55.000 0.00 0.00 0.00 3.36
4272 4623 1.552337 TGAGCTCCAAGTCAGGTGATC 59.448 52.381 12.15 0.00 37.90 2.92
4273 4624 1.649321 TGAGCTCCAAGTCAGGTGAT 58.351 50.000 12.15 0.00 0.00 3.06
4274 4625 1.345741 CTTGAGCTCCAAGTCAGGTGA 59.654 52.381 12.15 0.00 45.52 4.02
4275 4626 1.805869 CTTGAGCTCCAAGTCAGGTG 58.194 55.000 12.15 0.00 45.52 4.00
4283 4634 5.489792 AATGAGTAAGTCTTGAGCTCCAA 57.510 39.130 12.15 4.89 0.00 3.53
4284 4635 6.605471 TTAATGAGTAAGTCTTGAGCTCCA 57.395 37.500 12.15 0.00 0.00 3.86
4285 4636 7.324178 TCTTTAATGAGTAAGTCTTGAGCTCC 58.676 38.462 12.15 0.00 0.00 4.70
4286 4637 8.764524 TTCTTTAATGAGTAAGTCTTGAGCTC 57.235 34.615 6.82 6.82 0.00 4.09
4287 4638 8.589338 TCTTCTTTAATGAGTAAGTCTTGAGCT 58.411 33.333 0.00 0.00 0.00 4.09
4288 4639 8.652463 GTCTTCTTTAATGAGTAAGTCTTGAGC 58.348 37.037 0.00 0.00 0.00 4.26
4289 4640 9.698309 TGTCTTCTTTAATGAGTAAGTCTTGAG 57.302 33.333 0.00 0.00 0.00 3.02
4306 4657 9.071276 TCAAGCATTTCTCTTTATGTCTTCTTT 57.929 29.630 0.00 0.00 0.00 2.52
4307 4658 8.627208 TCAAGCATTTCTCTTTATGTCTTCTT 57.373 30.769 0.00 0.00 0.00 2.52
4308 4659 8.804912 ATCAAGCATTTCTCTTTATGTCTTCT 57.195 30.769 0.00 0.00 0.00 2.85
4309 4660 9.286946 CAATCAAGCATTTCTCTTTATGTCTTC 57.713 33.333 0.00 0.00 0.00 2.87
4310 4661 9.017509 TCAATCAAGCATTTCTCTTTATGTCTT 57.982 29.630 0.00 0.00 0.00 3.01
4311 4662 8.457261 GTCAATCAAGCATTTCTCTTTATGTCT 58.543 33.333 0.00 0.00 0.00 3.41
4312 4663 8.239314 TGTCAATCAAGCATTTCTCTTTATGTC 58.761 33.333 0.00 0.00 0.00 3.06
4313 4664 8.114331 TGTCAATCAAGCATTTCTCTTTATGT 57.886 30.769 0.00 0.00 0.00 2.29
4314 4665 8.975410 TTGTCAATCAAGCATTTCTCTTTATG 57.025 30.769 0.00 0.00 0.00 1.90
4317 4668 9.582431 CATATTGTCAATCAAGCATTTCTCTTT 57.418 29.630 0.07 0.00 39.55 2.52
4318 4669 8.746530 ACATATTGTCAATCAAGCATTTCTCTT 58.253 29.630 0.07 0.00 39.55 2.85
4319 4670 8.289939 ACATATTGTCAATCAAGCATTTCTCT 57.710 30.769 0.07 0.00 39.55 3.10
4320 4671 8.557869 GACATATTGTCAATCAAGCATTTCTC 57.442 34.615 0.07 0.00 46.22 2.87
4336 4687 7.500892 TCCGGCAATTATTGTAAGACATATTGT 59.499 33.333 6.81 0.00 30.86 2.71
4337 4688 7.870826 TCCGGCAATTATTGTAAGACATATTG 58.129 34.615 6.81 0.00 31.12 1.90
4338 4689 8.514594 CATCCGGCAATTATTGTAAGACATATT 58.485 33.333 6.81 0.00 0.00 1.28
4339 4690 7.362056 GCATCCGGCAATTATTGTAAGACATAT 60.362 37.037 6.81 0.00 43.97 1.78
4340 4691 6.072728 GCATCCGGCAATTATTGTAAGACATA 60.073 38.462 6.81 0.00 43.97 2.29
4341 4692 5.278463 GCATCCGGCAATTATTGTAAGACAT 60.278 40.000 6.81 0.00 43.97 3.06
4342 4693 4.036262 GCATCCGGCAATTATTGTAAGACA 59.964 41.667 6.81 0.00 43.97 3.41
4343 4694 4.537015 GCATCCGGCAATTATTGTAAGAC 58.463 43.478 6.81 0.00 43.97 3.01
4344 4695 3.249799 CGCATCCGGCAATTATTGTAAGA 59.750 43.478 6.81 1.75 45.17 2.10
4345 4696 3.249799 TCGCATCCGGCAATTATTGTAAG 59.750 43.478 6.81 0.00 45.17 2.34
4346 4697 3.206964 TCGCATCCGGCAATTATTGTAA 58.793 40.909 6.81 0.00 45.17 2.41
4347 4698 2.839975 TCGCATCCGGCAATTATTGTA 58.160 42.857 6.81 0.00 45.17 2.41
4348 4699 1.674359 TCGCATCCGGCAATTATTGT 58.326 45.000 6.81 0.00 45.17 2.71
4349 4700 2.772568 TTCGCATCCGGCAATTATTG 57.227 45.000 0.00 0.00 45.17 1.90
4350 4701 2.540769 CGTTTCGCATCCGGCAATTATT 60.541 45.455 0.00 0.00 45.17 1.40
4351 4702 1.002900 CGTTTCGCATCCGGCAATTAT 60.003 47.619 0.00 0.00 45.17 1.28
4352 4703 0.375454 CGTTTCGCATCCGGCAATTA 59.625 50.000 0.00 0.00 45.17 1.40
4353 4704 1.136565 CGTTTCGCATCCGGCAATT 59.863 52.632 0.00 0.00 45.17 2.32
4354 4705 1.095228 ATCGTTTCGCATCCGGCAAT 61.095 50.000 0.00 0.00 45.17 3.56
4355 4706 1.302383 AATCGTTTCGCATCCGGCAA 61.302 50.000 0.00 0.00 45.17 4.52
4356 4707 0.460459 TAATCGTTTCGCATCCGGCA 60.460 50.000 0.00 0.00 45.17 5.69
4357 4708 0.865769 ATAATCGTTTCGCATCCGGC 59.134 50.000 0.00 0.00 39.90 6.13
4358 4709 3.739300 ACTTATAATCGTTTCGCATCCGG 59.261 43.478 0.00 0.00 34.56 5.14
4359 4710 4.966850 ACTTATAATCGTTTCGCATCCG 57.033 40.909 0.00 0.00 0.00 4.18
4360 4711 7.576750 TGATACTTATAATCGTTTCGCATCC 57.423 36.000 0.00 0.00 0.00 3.51
4377 4728 9.293404 CAATCCATCTCCATGTTAATGATACTT 57.707 33.333 0.00 0.00 35.67 2.24
4378 4729 8.443176 ACAATCCATCTCCATGTTAATGATACT 58.557 33.333 0.00 0.00 35.67 2.12
4379 4730 8.627208 ACAATCCATCTCCATGTTAATGATAC 57.373 34.615 0.00 0.00 35.67 2.24
4380 4731 9.070179 CAACAATCCATCTCCATGTTAATGATA 57.930 33.333 0.00 0.00 35.67 2.15
4381 4732 7.562454 ACAACAATCCATCTCCATGTTAATGAT 59.438 33.333 0.00 0.00 35.67 2.45
4382 4733 6.891361 ACAACAATCCATCTCCATGTTAATGA 59.109 34.615 0.00 0.00 35.67 2.57
4383 4734 7.067859 AGACAACAATCCATCTCCATGTTAATG 59.932 37.037 0.00 0.00 33.24 1.90
4384 4735 7.121382 AGACAACAATCCATCTCCATGTTAAT 58.879 34.615 0.00 0.00 33.24 1.40
4385 4736 6.484288 AGACAACAATCCATCTCCATGTTAA 58.516 36.000 0.00 0.00 33.24 2.01
4386 4737 6.065976 AGACAACAATCCATCTCCATGTTA 57.934 37.500 0.00 0.00 33.24 2.41
4387 4738 4.927049 AGACAACAATCCATCTCCATGTT 58.073 39.130 0.00 0.00 34.74 2.71
4388 4739 4.019051 TGAGACAACAATCCATCTCCATGT 60.019 41.667 0.00 0.00 37.40 3.21
4389 4740 4.520179 TGAGACAACAATCCATCTCCATG 58.480 43.478 0.00 0.00 37.40 3.66
4390 4741 4.849813 TGAGACAACAATCCATCTCCAT 57.150 40.909 0.00 0.00 37.40 3.41
4391 4742 4.849813 ATGAGACAACAATCCATCTCCA 57.150 40.909 0.00 0.00 37.40 3.86
4392 4743 4.272018 CGAATGAGACAACAATCCATCTCC 59.728 45.833 0.00 0.00 37.40 3.71
4393 4744 4.260538 GCGAATGAGACAACAATCCATCTC 60.261 45.833 0.00 0.00 38.46 2.75
4394 4745 3.624861 GCGAATGAGACAACAATCCATCT 59.375 43.478 0.00 0.00 0.00 2.90
4395 4746 3.624861 AGCGAATGAGACAACAATCCATC 59.375 43.478 0.00 0.00 0.00 3.51
4396 4747 3.614092 AGCGAATGAGACAACAATCCAT 58.386 40.909 0.00 0.00 0.00 3.41
4397 4748 3.002791 GAGCGAATGAGACAACAATCCA 58.997 45.455 0.00 0.00 0.00 3.41
4398 4749 3.002791 TGAGCGAATGAGACAACAATCC 58.997 45.455 0.00 0.00 0.00 3.01
4399 4750 3.681897 AGTGAGCGAATGAGACAACAATC 59.318 43.478 0.00 0.00 0.00 2.67
4400 4751 3.668447 AGTGAGCGAATGAGACAACAAT 58.332 40.909 0.00 0.00 0.00 2.71
4401 4752 3.059884 GAGTGAGCGAATGAGACAACAA 58.940 45.455 0.00 0.00 0.00 2.83
4402 4753 2.677199 GAGTGAGCGAATGAGACAACA 58.323 47.619 0.00 0.00 0.00 3.33
4403 4754 1.651138 CGAGTGAGCGAATGAGACAAC 59.349 52.381 0.00 0.00 0.00 3.32
4404 4755 1.539827 TCGAGTGAGCGAATGAGACAA 59.460 47.619 0.00 0.00 37.35 3.18
4405 4756 1.165270 TCGAGTGAGCGAATGAGACA 58.835 50.000 0.00 0.00 37.35 3.41
4406 4757 2.483583 ATCGAGTGAGCGAATGAGAC 57.516 50.000 0.00 0.00 44.22 3.36
4407 4758 4.540824 CAATATCGAGTGAGCGAATGAGA 58.459 43.478 0.00 0.00 44.22 3.27
4408 4759 3.672397 CCAATATCGAGTGAGCGAATGAG 59.328 47.826 0.00 0.00 44.22 2.90
4409 4760 3.068165 ACCAATATCGAGTGAGCGAATGA 59.932 43.478 0.00 0.00 44.22 2.57
4410 4761 3.384668 ACCAATATCGAGTGAGCGAATG 58.615 45.455 0.00 0.00 44.22 2.67
4411 4762 3.735237 ACCAATATCGAGTGAGCGAAT 57.265 42.857 0.00 0.00 44.22 3.34
4412 4763 3.119280 TCAACCAATATCGAGTGAGCGAA 60.119 43.478 0.00 0.00 44.22 4.70
4413 4764 2.425668 TCAACCAATATCGAGTGAGCGA 59.574 45.455 0.00 0.00 45.22 4.93
4414 4765 2.535984 GTCAACCAATATCGAGTGAGCG 59.464 50.000 0.00 0.00 0.00 5.03
4415 4766 3.521560 TGTCAACCAATATCGAGTGAGC 58.478 45.455 0.00 0.00 0.00 4.26
4416 4767 4.998788 TCTGTCAACCAATATCGAGTGAG 58.001 43.478 0.00 0.00 0.00 3.51
4417 4768 5.592054 GATCTGTCAACCAATATCGAGTGA 58.408 41.667 0.00 0.00 0.00 3.41
4418 4769 4.442403 CGATCTGTCAACCAATATCGAGTG 59.558 45.833 0.00 0.00 39.56 3.51
4419 4770 4.338400 TCGATCTGTCAACCAATATCGAGT 59.662 41.667 0.00 0.00 40.40 4.18
4420 4771 4.860072 TCGATCTGTCAACCAATATCGAG 58.140 43.478 0.00 0.00 40.40 4.04
4421 4772 4.911514 TCGATCTGTCAACCAATATCGA 57.088 40.909 0.00 0.00 41.78 3.59
4422 4773 4.803613 TGTTCGATCTGTCAACCAATATCG 59.196 41.667 0.00 0.00 39.01 2.92
4423 4774 5.812642 ACTGTTCGATCTGTCAACCAATATC 59.187 40.000 0.60 0.00 0.00 1.63
4424 4775 5.734720 ACTGTTCGATCTGTCAACCAATAT 58.265 37.500 0.60 0.00 0.00 1.28
4425 4776 5.147330 ACTGTTCGATCTGTCAACCAATA 57.853 39.130 0.60 0.00 0.00 1.90
4426 4777 4.008074 ACTGTTCGATCTGTCAACCAAT 57.992 40.909 0.60 0.00 0.00 3.16
4427 4778 3.469008 ACTGTTCGATCTGTCAACCAA 57.531 42.857 0.60 0.00 0.00 3.67
4428 4779 3.130633 CAACTGTTCGATCTGTCAACCA 58.869 45.455 6.49 0.00 0.00 3.67
4429 4780 2.480419 CCAACTGTTCGATCTGTCAACC 59.520 50.000 6.49 0.00 0.00 3.77
4430 4781 2.096218 GCCAACTGTTCGATCTGTCAAC 60.096 50.000 6.49 0.00 0.00 3.18
4431 4782 2.143122 GCCAACTGTTCGATCTGTCAA 58.857 47.619 6.49 0.00 0.00 3.18
4432 4783 1.344438 AGCCAACTGTTCGATCTGTCA 59.656 47.619 6.49 0.00 0.00 3.58
4433 4784 2.086054 AGCCAACTGTTCGATCTGTC 57.914 50.000 6.49 0.00 0.00 3.51
4434 4785 2.563179 ACTAGCCAACTGTTCGATCTGT 59.437 45.455 0.60 0.60 0.00 3.41
4435 4786 3.238108 ACTAGCCAACTGTTCGATCTG 57.762 47.619 0.00 0.00 0.00 2.90
4436 4787 3.258372 TCAACTAGCCAACTGTTCGATCT 59.742 43.478 0.00 0.00 0.00 2.75
4437 4788 3.368236 GTCAACTAGCCAACTGTTCGATC 59.632 47.826 0.00 0.00 0.00 3.69
4438 4789 3.006967 AGTCAACTAGCCAACTGTTCGAT 59.993 43.478 0.00 0.00 0.00 3.59
4439 4790 2.364324 AGTCAACTAGCCAACTGTTCGA 59.636 45.455 0.00 0.00 0.00 3.71
4440 4791 2.476619 CAGTCAACTAGCCAACTGTTCG 59.523 50.000 9.65 0.00 35.51 3.95
4441 4792 2.808543 CCAGTCAACTAGCCAACTGTTC 59.191 50.000 14.39 0.00 37.92 3.18
4442 4793 2.172717 ACCAGTCAACTAGCCAACTGTT 59.827 45.455 14.39 0.00 37.92 3.16
4443 4794 1.768870 ACCAGTCAACTAGCCAACTGT 59.231 47.619 14.39 4.38 37.92 3.55
4444 4795 2.224281 TGACCAGTCAACTAGCCAACTG 60.224 50.000 10.51 10.51 39.04 3.16
4445 4796 2.047061 TGACCAGTCAACTAGCCAACT 58.953 47.619 0.00 0.00 36.53 3.16
4446 4797 2.543777 TGACCAGTCAACTAGCCAAC 57.456 50.000 0.00 0.00 36.53 3.77
4455 4806 6.582677 TCTTTTCAAAAGTTGACCAGTCAA 57.417 33.333 9.74 9.12 46.27 3.18
4456 4807 6.582677 TTCTTTTCAAAAGTTGACCAGTCA 57.417 33.333 9.74 0.00 39.87 3.41
4457 4808 7.222805 GGATTTCTTTTCAAAAGTTGACCAGTC 59.777 37.037 9.74 0.00 39.87 3.51
4458 4809 7.041721 GGATTTCTTTTCAAAAGTTGACCAGT 58.958 34.615 9.74 0.00 39.87 4.00
4459 4810 6.479990 GGGATTTCTTTTCAAAAGTTGACCAG 59.520 38.462 9.74 0.00 39.87 4.00
4460 4811 6.345298 GGGATTTCTTTTCAAAAGTTGACCA 58.655 36.000 9.74 0.00 39.87 4.02
4461 4812 5.758296 GGGGATTTCTTTTCAAAAGTTGACC 59.242 40.000 9.74 9.29 39.87 4.02
4462 4813 5.758296 GGGGGATTTCTTTTCAAAAGTTGAC 59.242 40.000 9.74 1.60 39.87 3.18
4463 4814 5.426833 TGGGGGATTTCTTTTCAAAAGTTGA 59.573 36.000 9.74 0.00 38.04 3.18
4464 4815 5.679601 TGGGGGATTTCTTTTCAAAAGTTG 58.320 37.500 9.74 0.00 0.00 3.16
4465 4816 5.966853 TGGGGGATTTCTTTTCAAAAGTT 57.033 34.783 9.74 0.00 0.00 2.66
4466 4817 5.966853 TTGGGGGATTTCTTTTCAAAAGT 57.033 34.783 9.74 0.00 0.00 2.66
4467 4818 7.637631 TTTTTGGGGGATTTCTTTTCAAAAG 57.362 32.000 3.20 3.20 35.18 2.27
4517 4868 9.702494 GGACTTTCTTTCAATTTTCATGAAGAT 57.298 29.630 8.41 6.96 38.01 2.40
4518 4869 8.694540 TGGACTTTCTTTCAATTTTCATGAAGA 58.305 29.630 8.41 4.49 38.01 2.87
4519 4870 8.758715 GTGGACTTTCTTTCAATTTTCATGAAG 58.241 33.333 8.41 0.00 38.01 3.02
4520 4871 8.256605 TGTGGACTTTCTTTCAATTTTCATGAA 58.743 29.630 3.38 3.38 35.11 2.57
4521 4872 7.780064 TGTGGACTTTCTTTCAATTTTCATGA 58.220 30.769 0.00 0.00 0.00 3.07
4522 4873 8.422973 TTGTGGACTTTCTTTCAATTTTCATG 57.577 30.769 0.00 0.00 0.00 3.07
4523 4874 8.882736 GTTTGTGGACTTTCTTTCAATTTTCAT 58.117 29.630 0.00 0.00 0.00 2.57
4524 4875 8.093927 AGTTTGTGGACTTTCTTTCAATTTTCA 58.906 29.630 0.00 0.00 0.00 2.69
4525 4876 8.479313 AGTTTGTGGACTTTCTTTCAATTTTC 57.521 30.769 0.00 0.00 0.00 2.29
4526 4877 8.846943 AAGTTTGTGGACTTTCTTTCAATTTT 57.153 26.923 0.00 0.00 36.49 1.82
4527 4878 9.936759 TTAAGTTTGTGGACTTTCTTTCAATTT 57.063 25.926 0.00 0.00 40.24 1.82
4528 4879 9.936759 TTTAAGTTTGTGGACTTTCTTTCAATT 57.063 25.926 0.00 0.00 40.24 2.32
4529 4880 9.936759 TTTTAAGTTTGTGGACTTTCTTTCAAT 57.063 25.926 0.00 0.00 40.24 2.57
4530 4881 9.765795 TTTTTAAGTTTGTGGACTTTCTTTCAA 57.234 25.926 0.00 0.00 40.24 2.69
4635 4986 9.874205 TCAAATTTGATCAACTCTTTTCAAGTT 57.126 25.926 16.91 0.00 33.08 2.66
4636 4987 9.874205 TTCAAATTTGATCAACTCTTTTCAAGT 57.126 25.926 21.10 0.00 37.00 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.