Multiple sequence alignment - TraesCS7B01G455900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G455900 chr7B 100.000 3452 0 0 1 3452 716371371 716367920 0.000000e+00 6375.0
1 TraesCS7B01G455900 chr7B 82.028 779 92 22 891 1655 716999252 716999996 1.360000e-173 619.0
2 TraesCS7B01G455900 chr7B 81.389 763 102 28 910 1658 716316270 716315534 1.380000e-163 586.0
3 TraesCS7B01G455900 chr7B 88.362 464 54 0 1198 1661 716466946 716466483 3.010000e-155 558.0
4 TraesCS7B01G455900 chr7B 79.548 841 122 31 1863 2666 717000046 717000873 3.890000e-154 555.0
5 TraesCS7B01G455900 chr7B 86.722 482 63 1 1198 1678 716308196 716307715 5.070000e-148 534.0
6 TraesCS7B01G455900 chr7B 78.102 822 138 29 1864 2666 716315399 716314601 1.860000e-132 483.0
7 TraesCS7B01G455900 chr7B 87.045 247 30 2 1864 2109 716307658 716307413 9.440000e-71 278.0
8 TraesCS7B01G455900 chr7D 91.621 3079 177 32 348 3369 620084838 620087892 0.000000e+00 4181.0
9 TraesCS7B01G455900 chr7D 82.622 679 94 16 977 1655 620116084 620116738 2.310000e-161 579.0
10 TraesCS7B01G455900 chr7D 87.794 467 57 0 1189 1655 620143050 620143516 6.510000e-152 547.0
11 TraesCS7B01G455900 chr7D 79.127 848 119 30 1863 2666 620143573 620144406 1.820000e-147 532.0
12 TraesCS7B01G455900 chr7D 90.476 315 27 3 1 313 8484813 8485126 2.480000e-111 412.0
13 TraesCS7B01G455900 chr7D 82.020 495 56 22 2191 2663 620198540 620199023 1.160000e-104 390.0
14 TraesCS7B01G455900 chr7D 86.400 250 32 2 1861 2109 620198148 620198396 4.390000e-69 272.0
15 TraesCS7B01G455900 chr7D 76.923 234 33 16 536 757 620115038 620115262 2.820000e-21 113.0
16 TraesCS7B01G455900 chr7A 81.723 766 113 14 891 1647 714823460 714822713 6.330000e-172 614.0
17 TraesCS7B01G455900 chr7A 81.010 495 63 15 2191 2662 714758857 714758371 7.040000e-97 364.0
18 TraesCS7B01G455900 chr7A 87.137 241 23 2 1863 2095 714822647 714822407 2.040000e-67 267.0
19 TraesCS7B01G455900 chr7A 84.921 252 35 3 1864 2114 714759138 714758889 5.720000e-63 252.0
20 TraesCS7B01G455900 chr7A 77.021 235 33 11 536 763 714825284 714825064 7.830000e-22 115.0
21 TraesCS7B01G455900 chrUn 88.248 468 53 2 1189 1655 466806786 466807252 3.010000e-155 558.0
22 TraesCS7B01G455900 chrUn 77.922 231 29 13 536 757 461239633 461239850 1.300000e-24 124.0
23 TraesCS7B01G455900 chr5B 91.909 309 25 0 5 313 333414277 333414585 1.900000e-117 433.0
24 TraesCS7B01G455900 chr5B 91.401 314 26 1 1 313 241505752 241505439 2.460000e-116 429.0
25 TraesCS7B01G455900 chr3B 92.182 307 23 1 7 313 349699798 349699493 1.900000e-117 433.0
26 TraesCS7B01G455900 chr4D 90.127 314 30 1 1 313 403800722 403800409 1.150000e-109 407.0
27 TraesCS7B01G455900 chr4B 90.096 313 31 0 1 313 17198345 17198657 1.150000e-109 407.0
28 TraesCS7B01G455900 chr2D 90.159 315 27 4 1 313 340700289 340700601 1.150000e-109 407.0
29 TraesCS7B01G455900 chr5D 90.291 309 30 0 5 313 314729537 314729845 4.150000e-109 405.0
30 TraesCS7B01G455900 chr1B 90.291 309 30 0 5 313 598930478 598930170 4.150000e-109 405.0
31 TraesCS7B01G455900 chr1B 90.000 50 4 1 3391 3440 360985289 360985337 2.880000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G455900 chr7B 716367920 716371371 3451 True 6375.0 6375 100.000000 1 3452 1 chr7B.!!$R1 3451
1 TraesCS7B01G455900 chr7B 716999252 717000873 1621 False 587.0 619 80.788000 891 2666 2 chr7B.!!$F1 1775
2 TraesCS7B01G455900 chr7B 716314601 716316270 1669 True 534.5 586 79.745500 910 2666 2 chr7B.!!$R4 1756
3 TraesCS7B01G455900 chr7B 716307413 716308196 783 True 406.0 534 86.883500 1198 2109 2 chr7B.!!$R3 911
4 TraesCS7B01G455900 chr7D 620084838 620087892 3054 False 4181.0 4181 91.621000 348 3369 1 chr7D.!!$F2 3021
5 TraesCS7B01G455900 chr7D 620143050 620144406 1356 False 539.5 547 83.460500 1189 2666 2 chr7D.!!$F4 1477
6 TraesCS7B01G455900 chr7D 620115038 620116738 1700 False 346.0 579 79.772500 536 1655 2 chr7D.!!$F3 1119
7 TraesCS7B01G455900 chr7D 620198148 620199023 875 False 331.0 390 84.210000 1861 2663 2 chr7D.!!$F5 802
8 TraesCS7B01G455900 chr7A 714822407 714825284 2877 True 332.0 614 81.960333 536 2095 3 chr7A.!!$R2 1559
9 TraesCS7B01G455900 chr7A 714758371 714759138 767 True 308.0 364 82.965500 1864 2662 2 chr7A.!!$R1 798

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
38 39 0.040425 GCACACACGCTCGGAAAAAT 60.040 50.0 0.00 0.0 0.00 1.82 F
203 204 0.249868 TCCCACACAGTCGCTTCAAG 60.250 55.0 0.00 0.0 0.00 3.02 F
205 206 0.249868 CCACACAGTCGCTTCAAGGA 60.250 55.0 0.00 0.0 0.00 3.36 F
1755 3784 0.317519 ACAAACGCGCTAAAACCAGC 60.318 50.0 5.73 0.0 38.23 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1727 3756 0.512952 AGCGCGTTTGTTCACTCATC 59.487 50.000 8.43 0.0 0.00 2.92 R
1838 3877 1.001068 TGCATGCAACAGATTGGTTGG 59.999 47.619 20.30 0.0 46.36 3.77 R
2099 4147 5.385198 GGAAATCAGGTCCATAAGCCAATA 58.615 41.667 0.00 0.0 35.05 1.90 R
3176 5360 0.108992 GTCGTCGGGCACTACATTGA 60.109 55.000 0.00 0.0 0.00 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 4.935495 CCACCTGGCACACACGCT 62.935 66.667 0.00 0.00 0.00 5.07
30 31 3.349006 CACCTGGCACACACGCTC 61.349 66.667 0.00 0.00 0.00 5.03
31 32 4.969196 ACCTGGCACACACGCTCG 62.969 66.667 0.00 0.00 0.00 5.03
33 34 4.662961 CTGGCACACACGCTCGGA 62.663 66.667 0.00 0.00 0.00 4.55
34 35 4.228567 TGGCACACACGCTCGGAA 62.229 61.111 0.00 0.00 0.00 4.30
35 36 2.970324 GGCACACACGCTCGGAAA 60.970 61.111 0.00 0.00 0.00 3.13
36 37 2.539338 GGCACACACGCTCGGAAAA 61.539 57.895 0.00 0.00 0.00 2.29
37 38 1.353804 GCACACACGCTCGGAAAAA 59.646 52.632 0.00 0.00 0.00 1.94
38 39 0.040425 GCACACACGCTCGGAAAAAT 60.040 50.000 0.00 0.00 0.00 1.82
39 40 1.673760 CACACACGCTCGGAAAAATG 58.326 50.000 0.00 0.00 0.00 2.32
40 41 1.262950 CACACACGCTCGGAAAAATGA 59.737 47.619 0.00 0.00 0.00 2.57
41 42 1.531149 ACACACGCTCGGAAAAATGAG 59.469 47.619 0.00 0.00 35.30 2.90
42 43 1.135972 CACACGCTCGGAAAAATGAGG 60.136 52.381 0.00 0.00 32.78 3.86
43 44 1.156736 CACGCTCGGAAAAATGAGGT 58.843 50.000 0.00 0.00 32.78 3.85
44 45 1.128692 CACGCTCGGAAAAATGAGGTC 59.871 52.381 0.00 0.00 32.78 3.85
45 46 0.370273 CGCTCGGAAAAATGAGGTCG 59.630 55.000 0.00 0.00 32.78 4.79
46 47 1.439679 GCTCGGAAAAATGAGGTCGT 58.560 50.000 0.00 0.00 32.78 4.34
47 48 1.128692 GCTCGGAAAAATGAGGTCGTG 59.871 52.381 0.00 0.00 32.78 4.35
48 49 2.413837 CTCGGAAAAATGAGGTCGTGT 58.586 47.619 0.00 0.00 0.00 4.49
49 50 2.139917 TCGGAAAAATGAGGTCGTGTG 58.860 47.619 0.00 0.00 0.00 3.82
50 51 1.399727 CGGAAAAATGAGGTCGTGTGC 60.400 52.381 0.00 0.00 0.00 4.57
51 52 1.399727 GGAAAAATGAGGTCGTGTGCG 60.400 52.381 0.00 0.00 39.92 5.34
52 53 1.529438 GAAAAATGAGGTCGTGTGCGA 59.471 47.619 0.00 0.00 45.79 5.10
72 73 4.946766 GGCGAACGAGCAAATACG 57.053 55.556 0.00 0.00 39.27 3.06
73 74 1.347221 GGCGAACGAGCAAATACGG 59.653 57.895 0.00 0.00 39.27 4.02
74 75 1.356527 GGCGAACGAGCAAATACGGT 61.357 55.000 0.00 0.00 39.27 4.83
75 76 0.441145 GCGAACGAGCAAATACGGTT 59.559 50.000 0.00 0.00 37.05 4.44
76 77 1.655099 GCGAACGAGCAAATACGGTTA 59.345 47.619 0.00 0.00 37.05 2.85
77 78 2.283351 GCGAACGAGCAAATACGGTTAT 59.717 45.455 0.00 0.00 37.05 1.89
78 79 3.486841 GCGAACGAGCAAATACGGTTATA 59.513 43.478 0.00 0.00 37.05 0.98
79 80 4.604697 GCGAACGAGCAAATACGGTTATAC 60.605 45.833 0.00 0.00 37.05 1.47
80 81 4.373324 CGAACGAGCAAATACGGTTATACG 60.373 45.833 0.00 0.00 40.31 3.06
91 92 4.278678 ACGGTTATACGTACAGTAGTGC 57.721 45.455 0.00 0.00 46.58 4.40
92 93 3.941483 ACGGTTATACGTACAGTAGTGCT 59.059 43.478 0.00 0.00 46.58 4.40
93 94 5.116180 ACGGTTATACGTACAGTAGTGCTA 58.884 41.667 0.00 0.00 46.58 3.49
94 95 5.584649 ACGGTTATACGTACAGTAGTGCTAA 59.415 40.000 0.00 0.00 46.58 3.09
95 96 6.093495 ACGGTTATACGTACAGTAGTGCTAAA 59.907 38.462 0.00 0.00 46.58 1.85
96 97 6.966632 CGGTTATACGTACAGTAGTGCTAAAA 59.033 38.462 0.00 0.00 38.94 1.52
97 98 7.484641 CGGTTATACGTACAGTAGTGCTAAAAA 59.515 37.037 0.00 0.00 38.94 1.94
126 127 6.780706 ATTATATAGGCAAACTCGTTTCCG 57.219 37.500 0.00 0.00 0.00 4.30
127 128 1.734163 ATAGGCAAACTCGTTTCCGG 58.266 50.000 0.00 0.00 33.95 5.14
128 129 0.393820 TAGGCAAACTCGTTTCCGGT 59.606 50.000 0.00 0.00 33.95 5.28
129 130 0.883370 AGGCAAACTCGTTTCCGGTC 60.883 55.000 0.00 0.00 33.95 4.79
130 131 1.203313 GCAAACTCGTTTCCGGTCG 59.797 57.895 0.00 5.71 33.95 4.79
131 132 1.493134 GCAAACTCGTTTCCGGTCGT 61.493 55.000 0.00 0.00 33.95 4.34
132 133 1.769733 CAAACTCGTTTCCGGTCGTA 58.230 50.000 0.00 0.00 33.95 3.43
133 134 2.126467 CAAACTCGTTTCCGGTCGTAA 58.874 47.619 0.00 0.00 33.95 3.18
134 135 2.056094 AACTCGTTTCCGGTCGTAAG 57.944 50.000 0.00 2.88 33.95 2.34
135 136 0.954452 ACTCGTTTCCGGTCGTAAGT 59.046 50.000 0.00 3.48 34.50 2.24
136 137 2.151202 ACTCGTTTCCGGTCGTAAGTA 58.849 47.619 0.00 0.00 34.50 2.24
137 138 2.095718 ACTCGTTTCCGGTCGTAAGTAC 60.096 50.000 0.00 0.00 34.50 2.73
138 139 1.876799 TCGTTTCCGGTCGTAAGTACA 59.123 47.619 0.00 0.00 34.50 2.90
139 140 2.487762 TCGTTTCCGGTCGTAAGTACAT 59.512 45.455 0.00 0.00 34.50 2.29
140 141 2.848302 CGTTTCCGGTCGTAAGTACATC 59.152 50.000 0.00 0.00 39.48 3.06
141 142 3.426695 CGTTTCCGGTCGTAAGTACATCT 60.427 47.826 0.00 0.00 39.48 2.90
142 143 4.101235 GTTTCCGGTCGTAAGTACATCTC 58.899 47.826 0.00 0.00 39.48 2.75
143 144 2.989909 TCCGGTCGTAAGTACATCTCA 58.010 47.619 0.00 0.00 39.48 3.27
144 145 2.679837 TCCGGTCGTAAGTACATCTCAC 59.320 50.000 0.00 0.00 39.48 3.51
145 146 2.421073 CCGGTCGTAAGTACATCTCACA 59.579 50.000 0.00 0.00 39.48 3.58
146 147 3.423571 CGGTCGTAAGTACATCTCACAC 58.576 50.000 0.00 0.00 39.48 3.82
147 148 3.120095 CGGTCGTAAGTACATCTCACACA 60.120 47.826 0.00 0.00 39.48 3.72
148 149 4.413087 GGTCGTAAGTACATCTCACACAG 58.587 47.826 0.00 0.00 39.48 3.66
149 150 4.082895 GGTCGTAAGTACATCTCACACAGT 60.083 45.833 0.00 0.00 39.48 3.55
150 151 5.087397 GTCGTAAGTACATCTCACACAGTC 58.913 45.833 0.00 0.00 39.48 3.51
151 152 4.758165 TCGTAAGTACATCTCACACAGTCA 59.242 41.667 0.00 0.00 39.48 3.41
152 153 5.089411 CGTAAGTACATCTCACACAGTCAG 58.911 45.833 0.00 0.00 0.00 3.51
153 154 5.334957 CGTAAGTACATCTCACACAGTCAGT 60.335 44.000 0.00 0.00 0.00 3.41
154 155 4.775058 AGTACATCTCACACAGTCAGTC 57.225 45.455 0.00 0.00 0.00 3.51
155 156 4.402829 AGTACATCTCACACAGTCAGTCT 58.597 43.478 0.00 0.00 0.00 3.24
156 157 3.932545 ACATCTCACACAGTCAGTCTC 57.067 47.619 0.00 0.00 0.00 3.36
157 158 2.227626 ACATCTCACACAGTCAGTCTCG 59.772 50.000 0.00 0.00 0.00 4.04
158 159 1.239347 TCTCACACAGTCAGTCTCGG 58.761 55.000 0.00 0.00 0.00 4.63
159 160 0.387878 CTCACACAGTCAGTCTCGGC 60.388 60.000 0.00 0.00 0.00 5.54
160 161 0.823769 TCACACAGTCAGTCTCGGCT 60.824 55.000 0.00 0.00 0.00 5.52
161 162 0.881796 CACACAGTCAGTCTCGGCTA 59.118 55.000 0.00 0.00 0.00 3.93
162 163 1.269723 CACACAGTCAGTCTCGGCTAA 59.730 52.381 0.00 0.00 0.00 3.09
163 164 1.961394 ACACAGTCAGTCTCGGCTAAA 59.039 47.619 0.00 0.00 0.00 1.85
164 165 2.288273 ACACAGTCAGTCTCGGCTAAAC 60.288 50.000 0.00 0.00 0.00 2.01
165 166 1.068472 ACAGTCAGTCTCGGCTAAACG 60.068 52.381 0.00 0.00 0.00 3.60
166 167 1.068472 CAGTCAGTCTCGGCTAAACGT 60.068 52.381 0.00 0.00 34.94 3.99
167 168 1.612463 AGTCAGTCTCGGCTAAACGTT 59.388 47.619 0.00 0.00 34.94 3.99
168 169 2.035576 AGTCAGTCTCGGCTAAACGTTT 59.964 45.455 18.90 18.90 34.94 3.60
169 170 2.798847 GTCAGTCTCGGCTAAACGTTTT 59.201 45.455 20.19 3.53 34.94 2.43
170 171 3.054878 TCAGTCTCGGCTAAACGTTTTC 58.945 45.455 20.19 11.26 34.94 2.29
187 188 6.132353 CGTTTTCGTTCGTATATACATCCC 57.868 41.667 13.22 0.00 38.65 3.85
188 189 5.686841 CGTTTTCGTTCGTATATACATCCCA 59.313 40.000 13.22 0.00 38.65 4.37
189 190 6.345250 CGTTTTCGTTCGTATATACATCCCAC 60.345 42.308 13.22 1.35 38.65 4.61
190 191 5.771153 TTCGTTCGTATATACATCCCACA 57.229 39.130 13.22 0.00 0.00 4.17
191 192 5.112220 TCGTTCGTATATACATCCCACAC 57.888 43.478 13.22 0.00 0.00 3.82
192 193 4.579753 TCGTTCGTATATACATCCCACACA 59.420 41.667 13.22 0.00 0.00 3.72
193 194 4.915667 CGTTCGTATATACATCCCACACAG 59.084 45.833 13.22 0.00 0.00 3.66
194 195 5.506815 CGTTCGTATATACATCCCACACAGT 60.507 44.000 13.22 0.00 0.00 3.55
195 196 5.700722 TCGTATATACATCCCACACAGTC 57.299 43.478 13.22 0.00 0.00 3.51
196 197 4.214758 TCGTATATACATCCCACACAGTCG 59.785 45.833 13.22 0.00 0.00 4.18
197 198 2.882927 TATACATCCCACACAGTCGC 57.117 50.000 0.00 0.00 0.00 5.19
198 199 1.195115 ATACATCCCACACAGTCGCT 58.805 50.000 0.00 0.00 0.00 4.93
199 200 0.973632 TACATCCCACACAGTCGCTT 59.026 50.000 0.00 0.00 0.00 4.68
200 201 0.320771 ACATCCCACACAGTCGCTTC 60.321 55.000 0.00 0.00 0.00 3.86
201 202 0.320683 CATCCCACACAGTCGCTTCA 60.321 55.000 0.00 0.00 0.00 3.02
202 203 0.396435 ATCCCACACAGTCGCTTCAA 59.604 50.000 0.00 0.00 0.00 2.69
203 204 0.249868 TCCCACACAGTCGCTTCAAG 60.250 55.000 0.00 0.00 0.00 3.02
204 205 1.230635 CCCACACAGTCGCTTCAAGG 61.231 60.000 0.00 0.00 0.00 3.61
205 206 0.249868 CCACACAGTCGCTTCAAGGA 60.250 55.000 0.00 0.00 0.00 3.36
206 207 1.581934 CACACAGTCGCTTCAAGGAA 58.418 50.000 0.00 0.00 0.00 3.36
207 208 1.939934 CACACAGTCGCTTCAAGGAAA 59.060 47.619 0.00 0.00 0.00 3.13
208 209 2.354510 CACACAGTCGCTTCAAGGAAAA 59.645 45.455 0.00 0.00 0.00 2.29
209 210 3.003689 CACACAGTCGCTTCAAGGAAAAT 59.996 43.478 0.00 0.00 0.00 1.82
210 211 3.003689 ACACAGTCGCTTCAAGGAAAATG 59.996 43.478 0.00 0.00 0.00 2.32
211 212 3.003689 CACAGTCGCTTCAAGGAAAATGT 59.996 43.478 0.00 0.00 0.00 2.71
212 213 3.632145 ACAGTCGCTTCAAGGAAAATGTT 59.368 39.130 0.00 0.00 0.00 2.71
213 214 4.097892 ACAGTCGCTTCAAGGAAAATGTTT 59.902 37.500 0.00 0.00 0.00 2.83
214 215 4.676924 CAGTCGCTTCAAGGAAAATGTTTC 59.323 41.667 0.00 0.00 0.00 2.78
215 216 4.580580 AGTCGCTTCAAGGAAAATGTTTCT 59.419 37.500 1.11 0.00 0.00 2.52
216 217 4.676924 GTCGCTTCAAGGAAAATGTTTCTG 59.323 41.667 1.11 0.00 0.00 3.02
217 218 4.338118 TCGCTTCAAGGAAAATGTTTCTGT 59.662 37.500 1.11 0.00 0.00 3.41
218 219 5.043248 CGCTTCAAGGAAAATGTTTCTGTT 58.957 37.500 1.11 0.00 0.00 3.16
219 220 5.173854 CGCTTCAAGGAAAATGTTTCTGTTC 59.826 40.000 1.11 0.00 0.00 3.18
220 221 5.173854 GCTTCAAGGAAAATGTTTCTGTTCG 59.826 40.000 1.11 0.00 0.00 3.95
221 222 4.606961 TCAAGGAAAATGTTTCTGTTCGC 58.393 39.130 1.11 0.00 0.00 4.70
222 223 4.097135 TCAAGGAAAATGTTTCTGTTCGCA 59.903 37.500 1.11 0.00 0.00 5.10
223 224 4.228912 AGGAAAATGTTTCTGTTCGCAG 57.771 40.909 1.11 0.00 46.29 5.18
224 225 3.004734 AGGAAAATGTTTCTGTTCGCAGG 59.995 43.478 1.11 0.00 45.04 4.85
225 226 3.243401 GGAAAATGTTTCTGTTCGCAGGT 60.243 43.478 1.11 0.00 45.04 4.00
226 227 4.023536 GGAAAATGTTTCTGTTCGCAGGTA 60.024 41.667 1.11 0.00 45.04 3.08
227 228 4.483476 AAATGTTTCTGTTCGCAGGTAC 57.517 40.909 0.00 0.00 45.04 3.34
228 229 2.605837 TGTTTCTGTTCGCAGGTACA 57.394 45.000 0.00 0.00 45.04 2.90
229 230 3.120321 TGTTTCTGTTCGCAGGTACAT 57.880 42.857 0.00 0.00 45.04 2.29
230 231 3.064207 TGTTTCTGTTCGCAGGTACATC 58.936 45.455 0.00 0.00 45.04 3.06
231 232 3.064207 GTTTCTGTTCGCAGGTACATCA 58.936 45.455 0.00 0.00 45.04 3.07
232 233 2.363788 TCTGTTCGCAGGTACATCAC 57.636 50.000 0.00 0.00 45.04 3.06
233 234 1.616374 TCTGTTCGCAGGTACATCACA 59.384 47.619 0.00 0.00 45.04 3.58
234 235 1.726791 CTGTTCGCAGGTACATCACAC 59.273 52.381 0.00 0.00 41.40 3.82
235 236 1.069358 TGTTCGCAGGTACATCACACA 59.931 47.619 0.00 0.00 0.00 3.72
236 237 1.459592 GTTCGCAGGTACATCACACAC 59.540 52.381 0.00 0.00 0.00 3.82
237 238 0.676736 TCGCAGGTACATCACACACA 59.323 50.000 0.00 0.00 0.00 3.72
238 239 1.069358 TCGCAGGTACATCACACACAA 59.931 47.619 0.00 0.00 0.00 3.33
239 240 2.076100 CGCAGGTACATCACACACAAT 58.924 47.619 0.00 0.00 0.00 2.71
240 241 2.483877 CGCAGGTACATCACACACAATT 59.516 45.455 0.00 0.00 0.00 2.32
241 242 3.058293 CGCAGGTACATCACACACAATTT 60.058 43.478 0.00 0.00 0.00 1.82
242 243 4.556501 CGCAGGTACATCACACACAATTTT 60.557 41.667 0.00 0.00 0.00 1.82
243 244 4.917415 GCAGGTACATCACACACAATTTTC 59.083 41.667 0.00 0.00 0.00 2.29
244 245 5.278463 GCAGGTACATCACACACAATTTTCT 60.278 40.000 0.00 0.00 0.00 2.52
245 246 6.373779 CAGGTACATCACACACAATTTTCTC 58.626 40.000 0.00 0.00 0.00 2.87
246 247 5.473504 AGGTACATCACACACAATTTTCTCC 59.526 40.000 0.00 0.00 0.00 3.71
247 248 4.488126 ACATCACACACAATTTTCTCCG 57.512 40.909 0.00 0.00 0.00 4.63
248 249 3.882888 ACATCACACACAATTTTCTCCGT 59.117 39.130 0.00 0.00 0.00 4.69
249 250 4.338118 ACATCACACACAATTTTCTCCGTT 59.662 37.500 0.00 0.00 0.00 4.44
250 251 5.529430 ACATCACACACAATTTTCTCCGTTA 59.471 36.000 0.00 0.00 0.00 3.18
251 252 6.038825 ACATCACACACAATTTTCTCCGTTAA 59.961 34.615 0.00 0.00 0.00 2.01
252 253 6.438259 TCACACACAATTTTCTCCGTTAAA 57.562 33.333 0.00 0.00 0.00 1.52
253 254 7.033530 TCACACACAATTTTCTCCGTTAAAT 57.966 32.000 0.00 0.00 0.00 1.40
254 255 7.136119 TCACACACAATTTTCTCCGTTAAATC 58.864 34.615 0.00 0.00 0.00 2.17
255 256 6.086241 CACACACAATTTTCTCCGTTAAATCG 59.914 38.462 0.00 0.00 0.00 3.34
256 257 6.140110 CACACAATTTTCTCCGTTAAATCGT 58.860 36.000 0.00 0.00 0.00 3.73
257 258 6.635239 CACACAATTTTCTCCGTTAAATCGTT 59.365 34.615 0.00 0.00 0.00 3.85
258 259 7.166804 CACACAATTTTCTCCGTTAAATCGTTT 59.833 33.333 0.00 0.00 0.00 3.60
259 260 7.166804 ACACAATTTTCTCCGTTAAATCGTTTG 59.833 33.333 0.00 0.00 0.00 2.93
260 261 7.166804 CACAATTTTCTCCGTTAAATCGTTTGT 59.833 33.333 0.00 0.00 0.00 2.83
261 262 7.166804 ACAATTTTCTCCGTTAAATCGTTTGTG 59.833 33.333 0.00 0.00 0.00 3.33
262 263 5.987777 TTTCTCCGTTAAATCGTTTGTGA 57.012 34.783 0.00 0.00 0.00 3.58
263 264 6.548441 TTTCTCCGTTAAATCGTTTGTGAT 57.452 33.333 0.00 0.00 0.00 3.06
264 265 7.655236 TTTCTCCGTTAAATCGTTTGTGATA 57.345 32.000 0.00 0.00 0.00 2.15
265 266 6.880822 TCTCCGTTAAATCGTTTGTGATAG 57.119 37.500 0.00 0.00 0.00 2.08
266 267 6.392354 TCTCCGTTAAATCGTTTGTGATAGT 58.608 36.000 0.00 0.00 0.00 2.12
267 268 6.309494 TCTCCGTTAAATCGTTTGTGATAGTG 59.691 38.462 0.00 0.00 0.00 2.74
268 269 5.927689 TCCGTTAAATCGTTTGTGATAGTGT 59.072 36.000 0.00 0.00 0.00 3.55
269 270 6.424509 TCCGTTAAATCGTTTGTGATAGTGTT 59.575 34.615 0.00 0.00 0.00 3.32
270 271 6.518395 CCGTTAAATCGTTTGTGATAGTGTTG 59.482 38.462 0.00 0.00 0.00 3.33
271 272 7.285069 CGTTAAATCGTTTGTGATAGTGTTGA 58.715 34.615 0.00 0.00 0.00 3.18
272 273 7.265495 CGTTAAATCGTTTGTGATAGTGTTGAC 59.735 37.037 0.00 0.00 0.00 3.18
273 274 6.612247 AAATCGTTTGTGATAGTGTTGACA 57.388 33.333 0.00 0.00 0.00 3.58
274 275 6.801539 AATCGTTTGTGATAGTGTTGACAT 57.198 33.333 0.00 0.00 0.00 3.06
275 276 6.801539 ATCGTTTGTGATAGTGTTGACATT 57.198 33.333 0.00 0.00 0.00 2.71
276 277 5.984627 TCGTTTGTGATAGTGTTGACATTG 58.015 37.500 0.00 0.00 0.00 2.82
277 278 5.755861 TCGTTTGTGATAGTGTTGACATTGA 59.244 36.000 0.00 0.00 0.00 2.57
278 279 6.258947 TCGTTTGTGATAGTGTTGACATTGAA 59.741 34.615 0.00 0.00 0.00 2.69
279 280 7.041440 TCGTTTGTGATAGTGTTGACATTGAAT 60.041 33.333 0.00 0.00 0.00 2.57
280 281 8.227119 CGTTTGTGATAGTGTTGACATTGAATA 58.773 33.333 0.00 0.00 0.00 1.75
281 282 9.329913 GTTTGTGATAGTGTTGACATTGAATAC 57.670 33.333 0.00 0.00 0.00 1.89
282 283 8.614469 TTGTGATAGTGTTGACATTGAATACA 57.386 30.769 0.00 0.00 0.00 2.29
283 284 8.614469 TGTGATAGTGTTGACATTGAATACAA 57.386 30.769 0.00 0.00 40.42 2.41
284 285 9.230122 TGTGATAGTGTTGACATTGAATACAAT 57.770 29.630 0.00 0.00 46.10 2.71
314 315 8.125728 ACAATTTTATTGTATGCGTTATTGGC 57.874 30.769 3.36 0.00 0.00 4.52
315 316 7.978975 ACAATTTTATTGTATGCGTTATTGGCT 59.021 29.630 3.36 0.00 0.00 4.75
316 317 8.816144 CAATTTTATTGTATGCGTTATTGGCTT 58.184 29.630 0.00 0.00 0.00 4.35
323 324 8.439993 TTGTATGCGTTATTGGCTTAATAAGA 57.560 30.769 3.88 0.00 40.83 2.10
324 325 8.615878 TGTATGCGTTATTGGCTTAATAAGAT 57.384 30.769 3.88 0.00 40.83 2.40
325 326 8.503196 TGTATGCGTTATTGGCTTAATAAGATG 58.497 33.333 3.88 0.00 40.83 2.90
326 327 6.312399 TGCGTTATTGGCTTAATAAGATGG 57.688 37.500 3.88 1.30 40.83 3.51
327 328 6.058833 TGCGTTATTGGCTTAATAAGATGGA 58.941 36.000 3.88 0.00 40.83 3.41
328 329 6.714810 TGCGTTATTGGCTTAATAAGATGGAT 59.285 34.615 3.88 0.00 40.83 3.41
329 330 7.094805 TGCGTTATTGGCTTAATAAGATGGATC 60.095 37.037 3.88 0.00 40.83 3.36
330 331 7.119846 GCGTTATTGGCTTAATAAGATGGATCT 59.880 37.037 3.88 0.00 40.83 2.75
331 332 8.446273 CGTTATTGGCTTAATAAGATGGATCTG 58.554 37.037 3.88 0.00 40.83 2.90
332 333 6.830873 ATTGGCTTAATAAGATGGATCTGC 57.169 37.500 3.88 0.00 37.19 4.26
333 334 5.308976 TGGCTTAATAAGATGGATCTGCA 57.691 39.130 3.88 0.00 37.19 4.41
334 335 5.311265 TGGCTTAATAAGATGGATCTGCAG 58.689 41.667 7.63 7.63 37.19 4.41
335 336 5.163163 TGGCTTAATAAGATGGATCTGCAGT 60.163 40.000 14.67 0.42 37.19 4.40
336 337 6.043127 TGGCTTAATAAGATGGATCTGCAGTA 59.957 38.462 14.67 0.48 37.19 2.74
337 338 6.593382 GGCTTAATAAGATGGATCTGCAGTAG 59.407 42.308 14.67 0.00 37.19 2.57
338 339 7.158021 GCTTAATAAGATGGATCTGCAGTAGT 58.842 38.462 14.67 0.78 37.19 2.73
339 340 7.117523 GCTTAATAAGATGGATCTGCAGTAGTG 59.882 40.741 14.67 0.00 37.19 2.74
340 341 6.737720 AATAAGATGGATCTGCAGTAGTGA 57.262 37.500 14.67 0.00 37.19 3.41
341 342 6.737720 ATAAGATGGATCTGCAGTAGTGAA 57.262 37.500 14.67 0.00 37.19 3.18
342 343 5.426689 AAGATGGATCTGCAGTAGTGAAA 57.573 39.130 14.67 0.00 37.19 2.69
343 344 5.021033 AGATGGATCTGCAGTAGTGAAAG 57.979 43.478 14.67 0.00 35.42 2.62
344 345 4.469227 AGATGGATCTGCAGTAGTGAAAGT 59.531 41.667 14.67 0.00 35.42 2.66
345 346 4.623932 TGGATCTGCAGTAGTGAAAGTT 57.376 40.909 14.67 0.00 0.00 2.66
346 347 4.973168 TGGATCTGCAGTAGTGAAAGTTT 58.027 39.130 14.67 0.00 0.00 2.66
353 354 6.868864 TCTGCAGTAGTGAAAGTTTGATCTAC 59.131 38.462 14.67 3.49 0.00 2.59
370 371 7.646548 TGATCTACAGTATAGTGAAAGCAGT 57.353 36.000 14.61 2.06 0.00 4.40
416 417 1.502231 AGCAGTTCATGTGACACGTC 58.498 50.000 0.00 0.00 0.00 4.34
421 422 2.100749 AGTTCATGTGACACGTCTGACA 59.899 45.455 8.73 0.00 0.00 3.58
423 424 3.385193 TCATGTGACACGTCTGACATT 57.615 42.857 8.73 0.00 27.78 2.71
425 426 3.740832 TCATGTGACACGTCTGACATTTC 59.259 43.478 8.73 0.00 27.78 2.17
427 428 2.159028 TGTGACACGTCTGACATTTCCA 60.159 45.455 8.73 0.00 0.00 3.53
444 445 6.264518 ACATTTCCAAGTTTTCTACCGAATGT 59.735 34.615 0.00 0.00 31.85 2.71
451 452 4.941873 AGTTTTCTACCGAATGTGATTCCC 59.058 41.667 0.00 0.00 35.89 3.97
463 464 1.134521 GTGATTCCCGCTGTCCACATA 60.135 52.381 0.00 0.00 0.00 2.29
471 472 1.933853 CGCTGTCCACATAAAGCCTAC 59.066 52.381 0.00 0.00 31.84 3.18
476 477 3.055385 TGTCCACATAAAGCCTACTGACC 60.055 47.826 0.00 0.00 0.00 4.02
490 491 2.311688 CTGACCCAGGGACCATACGC 62.312 65.000 14.54 0.00 0.00 4.42
491 492 3.441011 GACCCAGGGACCATACGCG 62.441 68.421 14.54 3.53 0.00 6.01
492 493 4.910585 CCCAGGGACCATACGCGC 62.911 72.222 5.73 0.00 0.00 6.86
619 639 3.955551 TCATAGCCACATGACAATTGCAT 59.044 39.130 5.05 7.41 29.93 3.96
689 709 7.229907 ACCTTGAGATTGTACGGTGTTTAAAAT 59.770 33.333 0.00 0.00 0.00 1.82
818 866 5.821995 AGGAACGGAGAGACTATACACTTAC 59.178 44.000 0.00 0.00 0.00 2.34
868 2412 8.971073 CACATGTGGATGGATATATACAGAGTA 58.029 37.037 18.51 0.00 33.39 2.59
869 2413 9.720874 ACATGTGGATGGATATATACAGAGTAT 57.279 33.333 3.54 0.00 33.39 2.12
900 2444 1.510492 TCCCATCAGGCATCAGCTAA 58.490 50.000 0.00 0.00 41.70 3.09
907 2451 3.873910 TCAGGCATCAGCTAACTTTACC 58.126 45.455 0.00 0.00 41.70 2.85
1109 3090 1.534595 GCAAGAAACTGGTGAGCTCTG 59.465 52.381 16.19 1.46 0.00 3.35
1134 3115 4.291783 GAGCGCAAATCTTCTATACGTCT 58.708 43.478 11.47 0.00 0.00 4.18
1138 3119 5.718246 CGCAAATCTTCTATACGTCTTGTG 58.282 41.667 0.00 0.00 0.00 3.33
1154 3150 3.422303 TGCGCGCATGTCTTGGTC 61.422 61.111 33.09 0.00 0.00 4.02
1193 3205 5.623956 ATTAATTCATCCCTGTCCGTACA 57.376 39.130 0.00 0.00 0.00 2.90
1195 3207 2.979814 TTCATCCCTGTCCGTACATG 57.020 50.000 0.00 0.00 34.37 3.21
1297 3313 2.338984 GAAGAGTGGGCGACGTGT 59.661 61.111 0.00 0.00 0.00 4.49
1432 3448 1.142965 CGGCCATGACATCACGGTA 59.857 57.895 2.24 0.00 30.68 4.02
1571 3587 1.985159 TCCACATGGTTCACCTTAGCT 59.015 47.619 0.00 0.00 36.82 3.32
1573 3589 2.026822 CCACATGGTTCACCTTAGCTCT 60.027 50.000 0.00 0.00 36.82 4.09
1664 3681 6.870965 GGTACGTAGGTCTCTCGAAATCTATA 59.129 42.308 0.00 0.00 0.00 1.31
1691 3720 7.291411 TCTCCTGCAAATATACTACTTCCTC 57.709 40.000 0.00 0.00 0.00 3.71
1694 3723 5.221461 CCTGCAAATATACTACTTCCTCCGT 60.221 44.000 0.00 0.00 0.00 4.69
1708 3737 7.427989 ACTTCCTCCGTAAAATATGGACTAA 57.572 36.000 0.00 0.00 38.90 2.24
1712 3741 7.495055 TCCTCCGTAAAATATGGACTAAAGTC 58.505 38.462 1.30 1.30 38.90 3.01
1744 3773 1.792367 TGAGATGAGTGAACAAACGCG 59.208 47.619 3.53 3.53 0.00 6.01
1752 3781 1.776897 GTGAACAAACGCGCTAAAACC 59.223 47.619 5.73 0.00 0.00 3.27
1754 3783 2.041244 GAACAAACGCGCTAAAACCAG 58.959 47.619 5.73 0.00 0.00 4.00
1755 3784 0.317519 ACAAACGCGCTAAAACCAGC 60.318 50.000 5.73 0.00 38.23 4.85
1833 3868 8.586744 AGGGAGTATATCTTTAATTCGTTCCTC 58.413 37.037 0.00 0.00 0.00 3.71
2099 4147 5.250200 TCACAAATGCTAAACTTACGGGAT 58.750 37.500 0.00 0.00 0.00 3.85
2126 4174 3.496870 GCTTATGGACCTGATTTCCGGAT 60.497 47.826 4.15 0.00 35.70 4.18
2294 4429 7.598493 TCCGTTGATTGATTTCTCCAATTTTTC 59.402 33.333 0.00 0.00 34.67 2.29
2335 4470 9.102757 TGCATATATTTGTTTGTTTTGTGTTGT 57.897 25.926 0.00 0.00 0.00 3.32
2433 4568 7.388776 CCTGATGATCACCATGAACGTTATTAT 59.611 37.037 0.00 0.00 35.17 1.28
2616 4781 1.196808 GACGAAGAAAAGCGATGCCAA 59.803 47.619 0.00 0.00 0.00 4.52
2640 4806 4.621034 GGAAAAATTTGCAACGACGATGAT 59.379 37.500 9.52 0.00 0.00 2.45
2666 4832 1.202952 ACCAAGCGGGGATGTTTGTTA 60.203 47.619 3.55 0.00 42.91 2.41
2700 4866 5.514274 AAATTGAAGTCACGGACATGTTT 57.486 34.783 0.00 0.00 34.60 2.83
2752 4918 6.176183 CAAGACTCCAATCTTTGTAGACCAT 58.824 40.000 0.00 0.00 36.78 3.55
2768 4934 8.106247 TGTAGACCATCTTATTTGTGTTTTCC 57.894 34.615 0.00 0.00 0.00 3.13
2829 4995 8.105829 ACTTACTTCTTCAATCATTGGACATCT 58.894 33.333 0.00 0.00 0.00 2.90
2863 5029 8.577296 TCTAGTGTGCCATCTTATTACATAGTC 58.423 37.037 0.00 0.00 0.00 2.59
2865 5031 8.478775 AGTGTGCCATCTTATTACATAGTCTA 57.521 34.615 0.00 0.00 0.00 2.59
2868 5034 8.360390 TGTGCCATCTTATTACATAGTCTAGTG 58.640 37.037 0.00 0.00 0.00 2.74
2869 5035 8.361139 GTGCCATCTTATTACATAGTCTAGTGT 58.639 37.037 0.00 0.00 0.00 3.55
2870 5036 8.360390 TGCCATCTTATTACATAGTCTAGTGTG 58.640 37.037 0.00 0.00 0.00 3.82
2872 5038 7.815068 CCATCTTATTACATAGTCTAGTGTGCC 59.185 40.741 0.00 0.00 0.00 5.01
2873 5039 7.891498 TCTTATTACATAGTCTAGTGTGCCA 57.109 36.000 0.00 0.00 0.00 4.92
2874 5040 8.478775 TCTTATTACATAGTCTAGTGTGCCAT 57.521 34.615 0.00 0.00 0.00 4.40
2875 5041 8.924303 TCTTATTACATAGTCTAGTGTGCCATT 58.076 33.333 0.00 0.00 0.00 3.16
2962 5133 2.093128 GGACCCAGATATTCACGTGGTT 60.093 50.000 17.00 6.04 0.00 3.67
2965 5136 3.773119 ACCCAGATATTCACGTGGTTACT 59.227 43.478 17.00 6.54 0.00 2.24
2972 5143 6.827251 AGATATTCACGTGGTTACTAGACAGA 59.173 38.462 17.00 0.00 0.00 3.41
2989 5160 4.163078 AGACAGAGAGAGAGAGAGAAGAGG 59.837 50.000 0.00 0.00 0.00 3.69
3019 5190 3.393089 AGATTCACGAGAGCAGTGTTT 57.607 42.857 0.00 0.00 40.28 2.83
3021 5192 2.309528 TTCACGAGAGCAGTGTTTGT 57.690 45.000 0.00 0.00 40.28 2.83
3080 5251 1.869342 GCATGGGCCGTCAAATAATGC 60.869 52.381 0.00 0.00 33.00 3.56
3118 5289 3.055094 ACCTGTGTATCGCAAAAGGATCT 60.055 43.478 0.00 0.00 36.93 2.75
3147 5329 0.321653 GACGCTTGTCAATGGTCCCT 60.322 55.000 5.31 0.00 42.41 4.20
3148 5330 0.981183 ACGCTTGTCAATGGTCCCTA 59.019 50.000 0.00 0.00 0.00 3.53
3149 5331 1.559682 ACGCTTGTCAATGGTCCCTAT 59.440 47.619 0.00 0.00 0.00 2.57
3150 5332 2.213499 CGCTTGTCAATGGTCCCTATC 58.787 52.381 0.00 0.00 0.00 2.08
3151 5333 2.576615 GCTTGTCAATGGTCCCTATCC 58.423 52.381 0.00 0.00 0.00 2.59
3152 5334 2.749800 GCTTGTCAATGGTCCCTATCCC 60.750 54.545 0.00 0.00 0.00 3.85
3175 5359 0.037326 GGCAGAGACATGTCCGTGAA 60.037 55.000 22.21 0.00 0.00 3.18
3176 5360 1.406069 GGCAGAGACATGTCCGTGAAT 60.406 52.381 22.21 2.15 0.00 2.57
3192 5376 2.351726 GTGAATCAATGTAGTGCCCGAC 59.648 50.000 0.00 0.00 0.00 4.79
3206 5390 1.534175 GCCCGACGACTAGATTCACAG 60.534 57.143 0.00 0.00 0.00 3.66
3246 5430 1.451927 GCCCATTCTGCCGATGTCA 60.452 57.895 0.00 0.00 0.00 3.58
3277 5461 5.046159 TGAGATTTATTCCGTGGGTTGTACT 60.046 40.000 0.00 0.00 0.00 2.73
3287 5471 3.404899 GTGGGTTGTACTCGGAAATTCA 58.595 45.455 0.00 0.00 0.00 2.57
3300 5485 1.526575 AAATTCACAGGGGCACGCAG 61.527 55.000 0.00 0.00 46.88 5.18
3302 5487 2.410322 ATTCACAGGGGCACGCAGAA 62.410 55.000 0.00 0.00 46.88 3.02
3317 5502 2.042831 AGAAGCGAAGGCATGCACC 61.043 57.895 21.36 2.42 43.41 5.01
3331 5516 3.052082 CACCTGTCAAGCCCTGCG 61.052 66.667 0.00 0.00 0.00 5.18
3369 5554 1.721489 CGCGATTCACGAAGTTGTTGG 60.721 52.381 0.00 0.00 41.61 3.77
3370 5555 1.529438 GCGATTCACGAAGTTGTTGGA 59.471 47.619 0.00 0.00 41.61 3.53
3371 5556 2.159627 GCGATTCACGAAGTTGTTGGAT 59.840 45.455 0.00 0.00 41.61 3.41
3372 5557 3.725010 GCGATTCACGAAGTTGTTGGATC 60.725 47.826 0.00 0.00 41.61 3.36
3373 5558 3.181520 CGATTCACGAAGTTGTTGGATCC 60.182 47.826 4.20 4.20 41.61 3.36
3374 5559 1.790755 TCACGAAGTTGTTGGATCCG 58.209 50.000 7.39 0.00 41.61 4.18
3375 5560 0.165944 CACGAAGTTGTTGGATCCGC 59.834 55.000 7.39 3.05 41.61 5.54
3376 5561 0.250124 ACGAAGTTGTTGGATCCGCA 60.250 50.000 7.39 5.97 37.78 5.69
3377 5562 0.165944 CGAAGTTGTTGGATCCGCAC 59.834 55.000 7.39 7.11 0.00 5.34
3378 5563 1.234821 GAAGTTGTTGGATCCGCACA 58.765 50.000 11.69 11.69 0.00 4.57
3379 5564 1.606668 GAAGTTGTTGGATCCGCACAA 59.393 47.619 20.39 20.39 0.00 3.33
3380 5565 1.238439 AGTTGTTGGATCCGCACAAG 58.762 50.000 23.38 0.00 31.10 3.16
3381 5566 0.240945 GTTGTTGGATCCGCACAAGG 59.759 55.000 23.38 0.00 31.10 3.61
3382 5567 0.893270 TTGTTGGATCCGCACAAGGG 60.893 55.000 20.39 0.00 0.00 3.95
3383 5568 2.361104 TTGGATCCGCACAAGGGC 60.361 61.111 7.39 0.00 0.00 5.19
3384 5569 3.203086 TTGGATCCGCACAAGGGCA 62.203 57.895 7.39 0.00 0.00 5.36
3385 5570 3.134127 GGATCCGCACAAGGGCAC 61.134 66.667 0.00 0.00 0.00 5.01
3386 5571 2.045926 GATCCGCACAAGGGCACT 60.046 61.111 0.00 0.00 0.00 4.40
3387 5572 1.220749 GATCCGCACAAGGGCACTA 59.779 57.895 0.00 0.00 0.00 2.74
3388 5573 0.392461 GATCCGCACAAGGGCACTAA 60.392 55.000 0.00 0.00 0.00 2.24
3389 5574 0.392998 ATCCGCACAAGGGCACTAAG 60.393 55.000 0.00 0.00 0.00 2.18
3390 5575 1.302511 CCGCACAAGGGCACTAAGT 60.303 57.895 0.00 0.00 0.00 2.24
3391 5576 0.889186 CCGCACAAGGGCACTAAGTT 60.889 55.000 0.00 0.00 0.00 2.66
3392 5577 0.951558 CGCACAAGGGCACTAAGTTT 59.048 50.000 0.00 0.00 0.00 2.66
3393 5578 1.336755 CGCACAAGGGCACTAAGTTTT 59.663 47.619 0.00 0.00 0.00 2.43
3394 5579 2.604614 CGCACAAGGGCACTAAGTTTTC 60.605 50.000 0.00 0.00 0.00 2.29
3395 5580 2.360801 GCACAAGGGCACTAAGTTTTCA 59.639 45.455 0.00 0.00 0.00 2.69
3396 5581 3.795488 GCACAAGGGCACTAAGTTTTCAC 60.795 47.826 0.00 0.00 0.00 3.18
3397 5582 2.956333 ACAAGGGCACTAAGTTTTCACC 59.044 45.455 0.00 0.00 0.00 4.02
3398 5583 1.892209 AGGGCACTAAGTTTTCACCG 58.108 50.000 0.00 0.00 0.00 4.94
3399 5584 1.418637 AGGGCACTAAGTTTTCACCGA 59.581 47.619 0.00 0.00 0.00 4.69
3400 5585 2.158726 AGGGCACTAAGTTTTCACCGAA 60.159 45.455 0.00 0.00 0.00 4.30
3401 5586 2.619646 GGGCACTAAGTTTTCACCGAAA 59.380 45.455 0.00 0.00 0.00 3.46
3402 5587 3.067040 GGGCACTAAGTTTTCACCGAAAA 59.933 43.478 0.00 0.00 38.90 2.29
3403 5588 4.440387 GGGCACTAAGTTTTCACCGAAAAA 60.440 41.667 3.60 0.00 42.09 1.94
3404 5589 4.738252 GGCACTAAGTTTTCACCGAAAAAG 59.262 41.667 3.60 1.67 42.09 2.27
3405 5590 4.738252 GCACTAAGTTTTCACCGAAAAAGG 59.262 41.667 3.60 0.00 42.09 3.11
3406 5591 4.738252 CACTAAGTTTTCACCGAAAAAGGC 59.262 41.667 3.60 0.00 42.09 4.35
3407 5592 4.643334 ACTAAGTTTTCACCGAAAAAGGCT 59.357 37.500 3.60 0.00 42.09 4.58
3408 5593 5.824097 ACTAAGTTTTCACCGAAAAAGGCTA 59.176 36.000 3.60 0.00 42.09 3.93
3409 5594 4.563337 AGTTTTCACCGAAAAAGGCTAC 57.437 40.909 3.60 0.00 42.09 3.58
3410 5595 4.204799 AGTTTTCACCGAAAAAGGCTACT 58.795 39.130 3.60 0.00 42.09 2.57
3411 5596 4.275196 AGTTTTCACCGAAAAAGGCTACTC 59.725 41.667 3.60 0.00 42.09 2.59
3412 5597 2.074547 TCACCGAAAAAGGCTACTCG 57.925 50.000 5.98 5.98 33.69 4.18
3413 5598 1.342174 TCACCGAAAAAGGCTACTCGT 59.658 47.619 10.63 0.00 33.69 4.18
3414 5599 1.725164 CACCGAAAAAGGCTACTCGTC 59.275 52.381 10.63 0.00 33.69 4.20
3415 5600 1.337541 ACCGAAAAAGGCTACTCGTCC 60.338 52.381 10.63 0.00 33.69 4.79
3416 5601 1.356938 CGAAAAAGGCTACTCGTCCC 58.643 55.000 0.00 0.00 0.00 4.46
3417 5602 1.356938 GAAAAAGGCTACTCGTCCCG 58.643 55.000 0.00 0.00 0.00 5.14
3418 5603 0.672711 AAAAAGGCTACTCGTCCCGC 60.673 55.000 0.00 0.00 0.00 6.13
3419 5604 1.542187 AAAAGGCTACTCGTCCCGCT 61.542 55.000 0.00 0.00 0.00 5.52
3420 5605 1.542187 AAAGGCTACTCGTCCCGCTT 61.542 55.000 0.00 0.00 0.00 4.68
3421 5606 1.542187 AAGGCTACTCGTCCCGCTTT 61.542 55.000 0.00 0.00 0.00 3.51
3422 5607 0.682209 AGGCTACTCGTCCCGCTTTA 60.682 55.000 0.00 0.00 0.00 1.85
3423 5608 0.388294 GGCTACTCGTCCCGCTTTAT 59.612 55.000 0.00 0.00 0.00 1.40
3424 5609 1.610522 GGCTACTCGTCCCGCTTTATA 59.389 52.381 0.00 0.00 0.00 0.98
3425 5610 2.351544 GGCTACTCGTCCCGCTTTATAG 60.352 54.545 0.00 0.00 0.00 1.31
3426 5611 2.551459 GCTACTCGTCCCGCTTTATAGA 59.449 50.000 0.00 0.00 0.00 1.98
3427 5612 3.190953 GCTACTCGTCCCGCTTTATAGAT 59.809 47.826 0.00 0.00 0.00 1.98
3428 5613 4.394300 GCTACTCGTCCCGCTTTATAGATA 59.606 45.833 0.00 0.00 0.00 1.98
3429 5614 5.106396 GCTACTCGTCCCGCTTTATAGATAA 60.106 44.000 0.00 0.00 0.00 1.75
3430 5615 5.779529 ACTCGTCCCGCTTTATAGATAAA 57.220 39.130 0.00 0.00 0.00 1.40
3441 5626 5.990408 CTTTATAGATAAAGCAACTGCCGG 58.010 41.667 8.66 0.00 41.69 6.13
3442 5627 2.325583 TAGATAAAGCAACTGCCGGG 57.674 50.000 2.18 0.00 43.38 5.73
3443 5628 0.618458 AGATAAAGCAACTGCCGGGA 59.382 50.000 2.18 0.00 43.38 5.14
3444 5629 1.004277 AGATAAAGCAACTGCCGGGAA 59.996 47.619 2.18 0.00 43.38 3.97
3445 5630 1.132453 GATAAAGCAACTGCCGGGAAC 59.868 52.381 2.18 0.00 43.38 3.62
3446 5631 0.891904 TAAAGCAACTGCCGGGAACC 60.892 55.000 2.18 0.00 42.49 3.62
3447 5632 2.920076 AAAGCAACTGCCGGGAACCA 62.920 55.000 2.18 0.00 46.98 3.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 4.935495 AGCGTGTGTGCCAGGTGG 62.935 66.667 0.00 0.00 34.65 4.61
13 14 3.349006 GAGCGTGTGTGCCAGGTG 61.349 66.667 0.00 0.00 34.65 4.00
14 15 4.969196 CGAGCGTGTGTGCCAGGT 62.969 66.667 0.00 0.00 34.65 4.00
16 17 4.662961 TCCGAGCGTGTGTGCCAG 62.663 66.667 0.00 0.00 34.65 4.85
17 18 3.741830 TTTCCGAGCGTGTGTGCCA 62.742 57.895 0.00 0.00 34.65 4.92
18 19 2.054140 TTTTTCCGAGCGTGTGTGCC 62.054 55.000 0.00 0.00 34.65 5.01
19 20 0.040425 ATTTTTCCGAGCGTGTGTGC 60.040 50.000 0.00 0.00 0.00 4.57
20 21 1.262950 TCATTTTTCCGAGCGTGTGTG 59.737 47.619 0.00 0.00 0.00 3.82
21 22 1.531149 CTCATTTTTCCGAGCGTGTGT 59.469 47.619 0.00 0.00 0.00 3.72
22 23 1.135972 CCTCATTTTTCCGAGCGTGTG 60.136 52.381 0.00 0.00 0.00 3.82
23 24 1.156736 CCTCATTTTTCCGAGCGTGT 58.843 50.000 0.00 0.00 0.00 4.49
24 25 1.128692 GACCTCATTTTTCCGAGCGTG 59.871 52.381 0.00 0.00 0.00 5.34
25 26 1.439679 GACCTCATTTTTCCGAGCGT 58.560 50.000 0.00 0.00 0.00 5.07
26 27 0.370273 CGACCTCATTTTTCCGAGCG 59.630 55.000 0.00 0.00 0.00 5.03
27 28 1.128692 CACGACCTCATTTTTCCGAGC 59.871 52.381 0.00 0.00 0.00 5.03
28 29 2.157668 CACACGACCTCATTTTTCCGAG 59.842 50.000 0.00 0.00 0.00 4.63
29 30 2.139917 CACACGACCTCATTTTTCCGA 58.860 47.619 0.00 0.00 0.00 4.55
30 31 1.399727 GCACACGACCTCATTTTTCCG 60.400 52.381 0.00 0.00 0.00 4.30
31 32 1.399727 CGCACACGACCTCATTTTTCC 60.400 52.381 0.00 0.00 43.93 3.13
32 33 1.529438 TCGCACACGACCTCATTTTTC 59.471 47.619 0.00 0.00 45.12 2.29
33 34 1.588674 TCGCACACGACCTCATTTTT 58.411 45.000 0.00 0.00 45.12 1.94
34 35 3.299050 TCGCACACGACCTCATTTT 57.701 47.368 0.00 0.00 45.12 1.82
51 52 1.079875 TATTTGCTCGTTCGCCGGTC 61.080 55.000 1.90 0.00 37.11 4.79
52 53 1.079681 TATTTGCTCGTTCGCCGGT 60.080 52.632 1.90 0.00 37.11 5.28
53 54 1.347221 GTATTTGCTCGTTCGCCGG 59.653 57.895 0.00 0.00 37.11 6.13
54 55 1.013755 CGTATTTGCTCGTTCGCCG 60.014 57.895 0.00 0.00 38.13 6.46
55 56 1.347221 CCGTATTTGCTCGTTCGCC 59.653 57.895 0.00 0.00 0.00 5.54
56 57 0.441145 AACCGTATTTGCTCGTTCGC 59.559 50.000 0.00 0.00 0.00 4.70
57 58 4.373324 CGTATAACCGTATTTGCTCGTTCG 60.373 45.833 0.00 0.00 0.00 3.95
58 59 4.500477 ACGTATAACCGTATTTGCTCGTTC 59.500 41.667 0.00 0.00 39.73 3.95
59 60 4.423732 ACGTATAACCGTATTTGCTCGTT 58.576 39.130 0.00 0.00 39.73 3.85
60 61 4.032703 ACGTATAACCGTATTTGCTCGT 57.967 40.909 0.00 0.00 39.73 4.18
61 62 4.969395 TGTACGTATAACCGTATTTGCTCG 59.031 41.667 0.00 0.00 44.27 5.03
62 63 5.973565 ACTGTACGTATAACCGTATTTGCTC 59.026 40.000 0.00 0.00 44.27 4.26
63 64 5.894807 ACTGTACGTATAACCGTATTTGCT 58.105 37.500 0.00 0.00 44.27 3.91
64 65 6.912591 ACTACTGTACGTATAACCGTATTTGC 59.087 38.462 0.00 0.00 44.27 3.68
65 66 7.096885 GCACTACTGTACGTATAACCGTATTTG 60.097 40.741 0.00 0.00 44.27 2.32
66 67 6.912591 GCACTACTGTACGTATAACCGTATTT 59.087 38.462 0.00 0.00 44.27 1.40
67 68 6.260936 AGCACTACTGTACGTATAACCGTATT 59.739 38.462 0.00 0.00 44.27 1.89
68 69 5.760253 AGCACTACTGTACGTATAACCGTAT 59.240 40.000 0.00 0.00 44.27 3.06
69 70 5.116180 AGCACTACTGTACGTATAACCGTA 58.884 41.667 0.00 0.00 42.00 4.02
70 71 3.941483 AGCACTACTGTACGTATAACCGT 59.059 43.478 0.00 0.00 44.50 4.83
71 72 4.542662 AGCACTACTGTACGTATAACCG 57.457 45.455 0.00 0.00 0.00 4.44
72 73 8.687824 TTTTTAGCACTACTGTACGTATAACC 57.312 34.615 0.00 0.00 0.00 2.85
120 121 4.101235 GAGATGTACTTACGACCGGAAAC 58.899 47.826 9.46 0.00 0.00 2.78
121 122 3.758023 TGAGATGTACTTACGACCGGAAA 59.242 43.478 9.46 0.00 0.00 3.13
122 123 3.127548 GTGAGATGTACTTACGACCGGAA 59.872 47.826 9.46 0.00 0.00 4.30
123 124 2.679837 GTGAGATGTACTTACGACCGGA 59.320 50.000 9.46 0.00 0.00 5.14
124 125 2.421073 TGTGAGATGTACTTACGACCGG 59.579 50.000 0.00 0.00 37.84 5.28
125 126 3.120095 TGTGTGAGATGTACTTACGACCG 60.120 47.826 0.00 0.00 37.84 4.79
126 127 4.082895 ACTGTGTGAGATGTACTTACGACC 60.083 45.833 0.00 0.00 37.84 4.79
127 128 5.044428 ACTGTGTGAGATGTACTTACGAC 57.956 43.478 0.00 0.00 37.84 4.34
128 129 4.758165 TGACTGTGTGAGATGTACTTACGA 59.242 41.667 0.00 0.00 37.84 3.43
129 130 5.043189 TGACTGTGTGAGATGTACTTACG 57.957 43.478 0.00 0.00 37.84 3.18
130 131 6.015027 ACTGACTGTGTGAGATGTACTTAC 57.985 41.667 0.00 0.00 35.96 2.34
131 132 6.004574 AGACTGACTGTGTGAGATGTACTTA 58.995 40.000 0.00 0.00 0.00 2.24
132 133 4.830046 AGACTGACTGTGTGAGATGTACTT 59.170 41.667 0.00 0.00 0.00 2.24
133 134 4.402829 AGACTGACTGTGTGAGATGTACT 58.597 43.478 0.00 0.00 0.00 2.73
134 135 4.670478 CGAGACTGACTGTGTGAGATGTAC 60.670 50.000 0.00 0.00 0.00 2.90
135 136 3.437049 CGAGACTGACTGTGTGAGATGTA 59.563 47.826 0.00 0.00 0.00 2.29
136 137 2.227626 CGAGACTGACTGTGTGAGATGT 59.772 50.000 0.00 0.00 0.00 3.06
137 138 2.415224 CCGAGACTGACTGTGTGAGATG 60.415 54.545 0.00 0.00 0.00 2.90
138 139 1.815613 CCGAGACTGACTGTGTGAGAT 59.184 52.381 0.00 0.00 0.00 2.75
139 140 1.239347 CCGAGACTGACTGTGTGAGA 58.761 55.000 0.00 0.00 0.00 3.27
140 141 0.387878 GCCGAGACTGACTGTGTGAG 60.388 60.000 0.00 0.00 0.00 3.51
141 142 0.823769 AGCCGAGACTGACTGTGTGA 60.824 55.000 0.00 0.00 0.00 3.58
142 143 0.881796 TAGCCGAGACTGACTGTGTG 59.118 55.000 0.00 0.00 0.00 3.82
143 144 1.617322 TTAGCCGAGACTGACTGTGT 58.383 50.000 0.00 0.00 0.00 3.72
144 145 2.329379 GTTTAGCCGAGACTGACTGTG 58.671 52.381 0.00 0.00 0.00 3.66
145 146 1.068472 CGTTTAGCCGAGACTGACTGT 60.068 52.381 0.00 0.00 0.00 3.55
146 147 1.068472 ACGTTTAGCCGAGACTGACTG 60.068 52.381 0.00 0.00 0.00 3.51
147 148 1.245732 ACGTTTAGCCGAGACTGACT 58.754 50.000 0.00 0.00 0.00 3.41
148 149 2.061740 AACGTTTAGCCGAGACTGAC 57.938 50.000 0.00 0.00 0.00 3.51
149 150 2.806608 AAACGTTTAGCCGAGACTGA 57.193 45.000 12.83 0.00 0.00 3.41
150 151 2.160013 CGAAAACGTTTAGCCGAGACTG 60.160 50.000 15.03 0.00 0.00 3.51
151 152 2.056577 CGAAAACGTTTAGCCGAGACT 58.943 47.619 15.03 0.00 0.00 3.24
152 153 1.788886 ACGAAAACGTTTAGCCGAGAC 59.211 47.619 26.06 8.44 0.00 3.36
153 154 2.138596 ACGAAAACGTTTAGCCGAGA 57.861 45.000 26.06 0.00 0.00 4.04
154 155 2.716704 CGAACGAAAACGTTTAGCCGAG 60.717 50.000 26.06 16.83 31.71 4.63
155 156 1.189884 CGAACGAAAACGTTTAGCCGA 59.810 47.619 26.06 0.00 31.71 5.54
156 157 1.071305 ACGAACGAAAACGTTTAGCCG 60.071 47.619 15.03 18.82 39.75 5.52
157 158 2.650900 ACGAACGAAAACGTTTAGCC 57.349 45.000 15.03 5.99 39.75 3.93
158 159 7.600039 TGTATATACGAACGAAAACGTTTAGC 58.400 34.615 15.03 8.74 42.61 3.09
159 160 9.755723 GATGTATATACGAACGAAAACGTTTAG 57.244 33.333 15.03 13.77 42.61 1.85
160 161 8.742188 GGATGTATATACGAACGAAAACGTTTA 58.258 33.333 15.03 0.00 42.61 2.01
161 162 7.254084 GGGATGTATATACGAACGAAAACGTTT 60.254 37.037 7.96 7.96 42.61 3.60
162 163 6.198966 GGGATGTATATACGAACGAAAACGTT 59.801 38.462 8.33 7.69 42.61 3.99
163 164 5.687285 GGGATGTATATACGAACGAAAACGT 59.313 40.000 8.33 0.00 44.72 3.99
164 165 5.686841 TGGGATGTATATACGAACGAAAACG 59.313 40.000 8.33 0.00 0.00 3.60
165 166 6.476380 TGTGGGATGTATATACGAACGAAAAC 59.524 38.462 8.33 0.94 0.00 2.43
166 167 6.476380 GTGTGGGATGTATATACGAACGAAAA 59.524 38.462 8.33 0.00 0.00 2.29
167 168 5.978919 GTGTGGGATGTATATACGAACGAAA 59.021 40.000 8.33 0.00 0.00 3.46
168 169 5.067544 TGTGTGGGATGTATATACGAACGAA 59.932 40.000 8.33 0.00 0.00 3.85
169 170 4.579753 TGTGTGGGATGTATATACGAACGA 59.420 41.667 8.33 0.00 0.00 3.85
170 171 4.862350 TGTGTGGGATGTATATACGAACG 58.138 43.478 8.33 0.00 0.00 3.95
171 172 5.839621 ACTGTGTGGGATGTATATACGAAC 58.160 41.667 8.33 2.52 0.00 3.95
172 173 5.278120 CGACTGTGTGGGATGTATATACGAA 60.278 44.000 8.33 0.00 0.00 3.85
173 174 4.214758 CGACTGTGTGGGATGTATATACGA 59.785 45.833 8.33 0.00 0.00 3.43
174 175 4.473199 CGACTGTGTGGGATGTATATACG 58.527 47.826 8.33 0.00 0.00 3.06
175 176 4.022242 AGCGACTGTGTGGGATGTATATAC 60.022 45.833 5.89 5.89 0.00 1.47
176 177 4.149598 AGCGACTGTGTGGGATGTATATA 58.850 43.478 0.00 0.00 0.00 0.86
177 178 2.965831 AGCGACTGTGTGGGATGTATAT 59.034 45.455 0.00 0.00 0.00 0.86
178 179 2.384828 AGCGACTGTGTGGGATGTATA 58.615 47.619 0.00 0.00 0.00 1.47
179 180 1.195115 AGCGACTGTGTGGGATGTAT 58.805 50.000 0.00 0.00 0.00 2.29
180 181 0.973632 AAGCGACTGTGTGGGATGTA 59.026 50.000 0.00 0.00 0.00 2.29
181 182 0.320771 GAAGCGACTGTGTGGGATGT 60.321 55.000 0.00 0.00 0.00 3.06
182 183 0.320683 TGAAGCGACTGTGTGGGATG 60.321 55.000 0.00 0.00 0.00 3.51
183 184 0.396435 TTGAAGCGACTGTGTGGGAT 59.604 50.000 0.00 0.00 0.00 3.85
184 185 0.249868 CTTGAAGCGACTGTGTGGGA 60.250 55.000 0.00 0.00 0.00 4.37
185 186 1.230635 CCTTGAAGCGACTGTGTGGG 61.231 60.000 0.00 0.00 0.00 4.61
186 187 0.249868 TCCTTGAAGCGACTGTGTGG 60.250 55.000 0.00 0.00 0.00 4.17
187 188 1.581934 TTCCTTGAAGCGACTGTGTG 58.418 50.000 0.00 0.00 0.00 3.82
188 189 2.325583 TTTCCTTGAAGCGACTGTGT 57.674 45.000 0.00 0.00 0.00 3.72
189 190 3.003689 ACATTTTCCTTGAAGCGACTGTG 59.996 43.478 0.00 0.00 0.00 3.66
190 191 3.214328 ACATTTTCCTTGAAGCGACTGT 58.786 40.909 0.00 0.00 0.00 3.55
191 192 3.904136 ACATTTTCCTTGAAGCGACTG 57.096 42.857 0.00 0.00 0.00 3.51
192 193 4.580580 AGAAACATTTTCCTTGAAGCGACT 59.419 37.500 0.00 0.00 0.00 4.18
193 194 4.676924 CAGAAACATTTTCCTTGAAGCGAC 59.323 41.667 0.00 0.00 0.00 5.19
194 195 4.338118 ACAGAAACATTTTCCTTGAAGCGA 59.662 37.500 0.00 0.00 0.00 4.93
195 196 4.610945 ACAGAAACATTTTCCTTGAAGCG 58.389 39.130 0.00 0.00 0.00 4.68
196 197 5.173854 CGAACAGAAACATTTTCCTTGAAGC 59.826 40.000 0.00 0.00 0.00 3.86
197 198 5.173854 GCGAACAGAAACATTTTCCTTGAAG 59.826 40.000 0.00 0.00 0.00 3.02
198 199 5.040635 GCGAACAGAAACATTTTCCTTGAA 58.959 37.500 0.00 0.00 0.00 2.69
199 200 4.097135 TGCGAACAGAAACATTTTCCTTGA 59.903 37.500 0.00 0.00 0.00 3.02
200 201 4.358851 TGCGAACAGAAACATTTTCCTTG 58.641 39.130 0.00 0.00 0.00 3.61
201 202 4.647424 TGCGAACAGAAACATTTTCCTT 57.353 36.364 0.00 0.00 0.00 3.36
214 215 1.726791 GTGTGATGTACCTGCGAACAG 59.273 52.381 0.00 0.00 44.05 3.16
215 216 1.069358 TGTGTGATGTACCTGCGAACA 59.931 47.619 0.00 0.00 0.00 3.18
216 217 1.459592 GTGTGTGATGTACCTGCGAAC 59.540 52.381 0.00 0.00 0.00 3.95
217 218 1.069358 TGTGTGTGATGTACCTGCGAA 59.931 47.619 0.00 0.00 0.00 4.70
218 219 0.676736 TGTGTGTGATGTACCTGCGA 59.323 50.000 0.00 0.00 0.00 5.10
219 220 1.507562 TTGTGTGTGATGTACCTGCG 58.492 50.000 0.00 0.00 0.00 5.18
220 221 4.503741 AAATTGTGTGTGATGTACCTGC 57.496 40.909 0.00 0.00 0.00 4.85
221 222 6.317789 AGAAAATTGTGTGTGATGTACCTG 57.682 37.500 0.00 0.00 0.00 4.00
222 223 5.473504 GGAGAAAATTGTGTGTGATGTACCT 59.526 40.000 0.00 0.00 0.00 3.08
223 224 5.616866 CGGAGAAAATTGTGTGTGATGTACC 60.617 44.000 0.00 0.00 0.00 3.34
224 225 5.049680 ACGGAGAAAATTGTGTGTGATGTAC 60.050 40.000 0.00 0.00 0.00 2.90
225 226 5.060506 ACGGAGAAAATTGTGTGTGATGTA 58.939 37.500 0.00 0.00 0.00 2.29
226 227 3.882888 ACGGAGAAAATTGTGTGTGATGT 59.117 39.130 0.00 0.00 0.00 3.06
227 228 4.488126 ACGGAGAAAATTGTGTGTGATG 57.512 40.909 0.00 0.00 0.00 3.07
228 229 6.627395 TTAACGGAGAAAATTGTGTGTGAT 57.373 33.333 0.00 0.00 0.00 3.06
229 230 6.438259 TTTAACGGAGAAAATTGTGTGTGA 57.562 33.333 0.00 0.00 0.00 3.58
230 231 6.086241 CGATTTAACGGAGAAAATTGTGTGTG 59.914 38.462 0.00 0.00 29.88 3.82
231 232 6.140110 CGATTTAACGGAGAAAATTGTGTGT 58.860 36.000 0.00 0.00 29.88 3.72
232 233 6.140110 ACGATTTAACGGAGAAAATTGTGTG 58.860 36.000 0.00 0.00 38.53 3.82
233 234 6.308371 ACGATTTAACGGAGAAAATTGTGT 57.692 33.333 0.00 0.00 38.53 3.72
234 235 7.166804 ACAAACGATTTAACGGAGAAAATTGTG 59.833 33.333 0.00 0.00 39.25 3.33
235 236 7.166804 CACAAACGATTTAACGGAGAAAATTGT 59.833 33.333 0.00 0.00 40.17 2.71
236 237 7.377397 TCACAAACGATTTAACGGAGAAAATTG 59.623 33.333 0.00 0.00 35.51 2.32
237 238 7.419204 TCACAAACGATTTAACGGAGAAAATT 58.581 30.769 0.00 0.00 37.61 1.82
238 239 6.961576 TCACAAACGATTTAACGGAGAAAAT 58.038 32.000 0.00 0.00 37.61 1.82
239 240 6.360844 TCACAAACGATTTAACGGAGAAAA 57.639 33.333 0.00 0.00 37.61 2.29
240 241 5.987777 TCACAAACGATTTAACGGAGAAA 57.012 34.783 0.00 0.00 37.61 2.52
241 242 6.869913 ACTATCACAAACGATTTAACGGAGAA 59.130 34.615 0.00 0.00 37.61 2.87
242 243 6.309494 CACTATCACAAACGATTTAACGGAGA 59.691 38.462 0.00 0.00 37.61 3.71
243 244 6.090358 ACACTATCACAAACGATTTAACGGAG 59.910 38.462 0.00 0.00 37.61 4.63
244 245 5.927689 ACACTATCACAAACGATTTAACGGA 59.072 36.000 0.00 0.00 37.61 4.69
245 246 6.160664 ACACTATCACAAACGATTTAACGG 57.839 37.500 0.00 0.00 37.61 4.44
246 247 7.265495 GTCAACACTATCACAAACGATTTAACG 59.735 37.037 0.00 0.00 39.31 3.18
247 248 8.065407 TGTCAACACTATCACAAACGATTTAAC 58.935 33.333 0.00 0.00 0.00 2.01
248 249 8.144155 TGTCAACACTATCACAAACGATTTAA 57.856 30.769 0.00 0.00 0.00 1.52
249 250 7.716768 TGTCAACACTATCACAAACGATTTA 57.283 32.000 0.00 0.00 0.00 1.40
250 251 6.612247 TGTCAACACTATCACAAACGATTT 57.388 33.333 0.00 0.00 0.00 2.17
251 252 6.801539 ATGTCAACACTATCACAAACGATT 57.198 33.333 0.00 0.00 0.00 3.34
252 253 6.426633 TCAATGTCAACACTATCACAAACGAT 59.573 34.615 0.00 0.00 0.00 3.73
253 254 5.755861 TCAATGTCAACACTATCACAAACGA 59.244 36.000 0.00 0.00 0.00 3.85
254 255 5.984627 TCAATGTCAACACTATCACAAACG 58.015 37.500 0.00 0.00 0.00 3.60
255 256 9.329913 GTATTCAATGTCAACACTATCACAAAC 57.670 33.333 0.00 0.00 0.00 2.93
256 257 9.061435 TGTATTCAATGTCAACACTATCACAAA 57.939 29.630 0.00 0.00 0.00 2.83
257 258 8.614469 TGTATTCAATGTCAACACTATCACAA 57.386 30.769 0.00 0.00 0.00 3.33
258 259 8.614469 TTGTATTCAATGTCAACACTATCACA 57.386 30.769 0.00 0.00 0.00 3.58
288 289 8.599774 GCCAATAACGCATACAATAAAATTGTT 58.400 29.630 10.29 0.00 34.11 2.83
289 290 7.978975 AGCCAATAACGCATACAATAAAATTGT 59.021 29.630 9.94 9.94 36.49 2.71
290 291 8.351495 AGCCAATAACGCATACAATAAAATTG 57.649 30.769 0.00 0.00 0.00 2.32
291 292 8.940768 AAGCCAATAACGCATACAATAAAATT 57.059 26.923 0.00 0.00 0.00 1.82
297 298 9.062524 TCTTATTAAGCCAATAACGCATACAAT 57.937 29.630 0.00 0.00 34.77 2.71
298 299 8.439993 TCTTATTAAGCCAATAACGCATACAA 57.560 30.769 0.00 0.00 34.77 2.41
299 300 8.503196 CATCTTATTAAGCCAATAACGCATACA 58.497 33.333 0.00 0.00 34.77 2.29
300 301 7.962918 CCATCTTATTAAGCCAATAACGCATAC 59.037 37.037 0.00 0.00 34.77 2.39
301 302 7.880713 TCCATCTTATTAAGCCAATAACGCATA 59.119 33.333 0.00 0.00 34.77 3.14
302 303 6.714810 TCCATCTTATTAAGCCAATAACGCAT 59.285 34.615 0.00 0.00 34.77 4.73
303 304 6.058833 TCCATCTTATTAAGCCAATAACGCA 58.941 36.000 0.00 0.00 34.77 5.24
304 305 6.554334 TCCATCTTATTAAGCCAATAACGC 57.446 37.500 0.00 0.00 34.77 4.84
305 306 8.446273 CAGATCCATCTTATTAAGCCAATAACG 58.554 37.037 0.00 0.00 34.77 3.18
306 307 8.239998 GCAGATCCATCTTATTAAGCCAATAAC 58.760 37.037 0.00 0.00 34.77 1.89
307 308 7.944000 TGCAGATCCATCTTATTAAGCCAATAA 59.056 33.333 0.00 2.20 36.87 1.40
308 309 7.460910 TGCAGATCCATCTTATTAAGCCAATA 58.539 34.615 0.00 0.00 34.22 1.90
309 310 6.309357 TGCAGATCCATCTTATTAAGCCAAT 58.691 36.000 0.00 0.00 34.22 3.16
310 311 5.693961 TGCAGATCCATCTTATTAAGCCAA 58.306 37.500 0.00 0.00 34.22 4.52
311 312 5.163163 ACTGCAGATCCATCTTATTAAGCCA 60.163 40.000 23.35 0.00 34.22 4.75
312 313 5.312079 ACTGCAGATCCATCTTATTAAGCC 58.688 41.667 23.35 0.00 34.22 4.35
313 314 7.117523 CACTACTGCAGATCCATCTTATTAAGC 59.882 40.741 23.35 0.00 34.22 3.09
314 315 8.363390 TCACTACTGCAGATCCATCTTATTAAG 58.637 37.037 23.35 0.00 34.22 1.85
315 316 8.250143 TCACTACTGCAGATCCATCTTATTAA 57.750 34.615 23.35 0.00 34.22 1.40
316 317 7.839680 TCACTACTGCAGATCCATCTTATTA 57.160 36.000 23.35 0.00 34.22 0.98
317 318 6.737720 TCACTACTGCAGATCCATCTTATT 57.262 37.500 23.35 0.00 34.22 1.40
318 319 6.737720 TTCACTACTGCAGATCCATCTTAT 57.262 37.500 23.35 0.00 34.22 1.73
319 320 6.155221 ACTTTCACTACTGCAGATCCATCTTA 59.845 38.462 23.35 0.00 34.22 2.10
320 321 5.046014 ACTTTCACTACTGCAGATCCATCTT 60.046 40.000 23.35 0.00 34.22 2.40
321 322 4.469227 ACTTTCACTACTGCAGATCCATCT 59.531 41.667 23.35 0.00 37.72 2.90
322 323 4.764172 ACTTTCACTACTGCAGATCCATC 58.236 43.478 23.35 0.00 0.00 3.51
323 324 4.833478 ACTTTCACTACTGCAGATCCAT 57.167 40.909 23.35 0.00 0.00 3.41
324 325 4.623932 AACTTTCACTACTGCAGATCCA 57.376 40.909 23.35 1.15 0.00 3.41
325 326 4.997395 TCAAACTTTCACTACTGCAGATCC 59.003 41.667 23.35 0.00 0.00 3.36
326 327 6.593382 AGATCAAACTTTCACTACTGCAGATC 59.407 38.462 23.35 7.69 0.00 2.75
327 328 6.471146 AGATCAAACTTTCACTACTGCAGAT 58.529 36.000 23.35 7.41 0.00 2.90
328 329 5.858381 AGATCAAACTTTCACTACTGCAGA 58.142 37.500 23.35 2.95 0.00 4.26
329 330 6.646653 TGTAGATCAAACTTTCACTACTGCAG 59.353 38.462 13.48 13.48 33.68 4.41
330 331 6.521162 TGTAGATCAAACTTTCACTACTGCA 58.479 36.000 0.00 0.00 33.68 4.41
331 332 6.647067 ACTGTAGATCAAACTTTCACTACTGC 59.353 38.462 0.00 0.00 35.11 4.40
332 333 9.862371 ATACTGTAGATCAAACTTTCACTACTG 57.138 33.333 0.00 0.00 36.56 2.74
336 337 9.862371 CACTATACTGTAGATCAAACTTTCACT 57.138 33.333 0.00 0.00 0.00 3.41
337 338 9.856488 TCACTATACTGTAGATCAAACTTTCAC 57.144 33.333 0.00 0.00 0.00 3.18
341 342 9.372369 GCTTTCACTATACTGTAGATCAAACTT 57.628 33.333 0.00 0.00 0.00 2.66
342 343 8.531982 TGCTTTCACTATACTGTAGATCAAACT 58.468 33.333 0.00 0.00 0.00 2.66
343 344 8.703604 TGCTTTCACTATACTGTAGATCAAAC 57.296 34.615 0.00 0.00 0.00 2.93
344 345 8.531982 ACTGCTTTCACTATACTGTAGATCAAA 58.468 33.333 0.00 0.00 0.00 2.69
345 346 8.067751 ACTGCTTTCACTATACTGTAGATCAA 57.932 34.615 0.00 0.00 0.00 2.57
346 347 7.339466 TGACTGCTTTCACTATACTGTAGATCA 59.661 37.037 0.00 0.00 0.00 2.92
370 371 1.339055 CCCATCAAGGAACGAAGCTGA 60.339 52.381 0.00 0.00 41.22 4.26
379 380 2.647299 TGCTTTAGGTCCCATCAAGGAA 59.353 45.455 0.00 0.00 41.22 3.36
416 417 5.468746 TCGGTAGAAAACTTGGAAATGTCAG 59.531 40.000 0.00 0.00 0.00 3.51
421 422 6.488683 TCACATTCGGTAGAAAACTTGGAAAT 59.511 34.615 0.00 0.00 40.15 2.17
423 424 5.369833 TCACATTCGGTAGAAAACTTGGAA 58.630 37.500 0.00 0.00 40.15 3.53
425 426 5.880054 ATCACATTCGGTAGAAAACTTGG 57.120 39.130 0.00 0.00 40.15 3.61
427 428 5.414765 GGGAATCACATTCGGTAGAAAACTT 59.585 40.000 0.00 0.00 40.15 2.66
444 445 1.199615 TATGTGGACAGCGGGAATCA 58.800 50.000 0.00 0.00 0.00 2.57
451 452 1.933853 GTAGGCTTTATGTGGACAGCG 59.066 52.381 0.00 0.00 0.00 5.18
463 464 0.178873 TCCCTGGGTCAGTAGGCTTT 60.179 55.000 13.56 0.00 32.58 3.51
471 472 1.823295 CGTATGGTCCCTGGGTCAG 59.177 63.158 13.56 0.00 0.00 3.51
542 543 8.943594 ACCTTAGAAACAAATACACCCAATAA 57.056 30.769 0.00 0.00 0.00 1.40
592 612 4.439305 TTGTCATGTGGCTATGAAAAGC 57.561 40.909 6.59 0.00 38.69 3.51
602 622 1.472026 GGGATGCAATTGTCATGTGGC 60.472 52.381 16.66 5.76 0.00 5.01
619 639 2.477245 TCATTCCGATTCAAGGAGGGA 58.523 47.619 0.00 0.00 39.22 4.20
689 709 9.927668 GAAAATTGATGATCCTTCCAGTTTTTA 57.072 29.630 0.00 0.00 31.65 1.52
693 723 8.884124 TTAGAAAATTGATGATCCTTCCAGTT 57.116 30.769 0.00 0.00 0.00 3.16
694 724 9.129532 GATTAGAAAATTGATGATCCTTCCAGT 57.870 33.333 0.00 0.00 0.00 4.00
695 725 9.128404 TGATTAGAAAATTGATGATCCTTCCAG 57.872 33.333 0.00 0.00 0.00 3.86
712 742 7.386573 TCTCATGCTTACAACGTTGATTAGAAA 59.613 33.333 33.66 17.24 0.00 2.52
789 832 7.395489 AGTGTATAGTCTCTCCGTTCCTTTTTA 59.605 37.037 0.00 0.00 0.00 1.52
860 2404 7.060421 TGGGATGCATCGATATATACTCTGTA 58.940 38.462 20.15 0.00 0.00 2.74
862 2406 6.396829 TGGGATGCATCGATATATACTCTG 57.603 41.667 20.15 0.00 0.00 3.35
866 2410 6.162079 CCTGATGGGATGCATCGATATATAC 58.838 44.000 20.15 3.82 37.23 1.47
868 2412 4.504514 GCCTGATGGGATGCATCGATATAT 60.505 45.833 20.15 9.54 37.23 0.86
869 2413 3.181462 GCCTGATGGGATGCATCGATATA 60.181 47.826 20.15 6.07 37.23 0.86
870 2414 2.421107 GCCTGATGGGATGCATCGATAT 60.421 50.000 20.15 13.55 37.23 1.63
874 2418 0.608308 ATGCCTGATGGGATGCATCG 60.608 55.000 20.15 5.91 43.06 3.84
944 2492 3.371965 AGCTAGGTGGGTTATCGAAGAA 58.628 45.455 0.00 0.00 43.58 2.52
1109 3090 3.118157 CGTATAGAAGATTTGCGCTCGAC 59.882 47.826 9.73 0.00 0.00 4.20
1134 3115 2.251963 CAAGACATGCGCGCACAA 59.748 55.556 39.05 15.44 0.00 3.33
1138 3119 2.965147 TTGACCAAGACATGCGCGC 61.965 57.895 27.26 27.26 0.00 6.86
1258 3274 5.039645 TCCTTGATATTTCCCCAGTTCTCT 58.960 41.667 0.00 0.00 0.00 3.10
1273 3289 1.480954 GTCGCCCACTCTTCCTTGATA 59.519 52.381 0.00 0.00 0.00 2.15
1297 3313 3.931190 CTGCATCAGCCCAGTGCCA 62.931 63.158 0.00 0.00 42.71 4.92
1432 3448 3.419759 GCGTCGCCGTGGAACATT 61.420 61.111 5.75 0.00 44.52 2.71
1474 3490 1.227380 CTGCCTGAGGTGATACGCC 60.227 63.158 0.00 0.00 0.00 5.68
1571 3587 1.004560 CGGCAGCCTTGTTCTCAGA 60.005 57.895 10.54 0.00 0.00 3.27
1573 3589 1.597854 CACGGCAGCCTTGTTCTCA 60.598 57.895 10.54 0.00 0.00 3.27
1664 3681 7.291182 AGGAAGTAGTATATTTGCAGGAGATGT 59.709 37.037 0.00 0.00 31.14 3.06
1691 3720 9.760077 ATGTAGACTTTAGTCCATATTTTACGG 57.240 33.333 6.28 0.00 45.85 4.02
1712 3741 9.061435 TGTTCACTCATCTCAGTCTATATGTAG 57.939 37.037 0.00 0.00 0.00 2.74
1727 3756 0.512952 AGCGCGTTTGTTCACTCATC 59.487 50.000 8.43 0.00 0.00 2.92
1730 3759 2.656192 TTTAGCGCGTTTGTTCACTC 57.344 45.000 8.43 0.00 0.00 3.51
1735 3764 1.862411 GCTGGTTTTAGCGCGTTTGTT 60.862 47.619 8.43 0.00 33.46 2.83
1744 3773 7.653767 ATTATATAGACACGCTGGTTTTAGC 57.346 36.000 0.00 0.00 40.29 3.09
1752 3781 7.463469 TGTTGTGAATTATATAGACACGCTG 57.537 36.000 0.00 0.00 34.72 5.18
1754 3783 8.388103 ACTTTGTTGTGAATTATATAGACACGC 58.612 33.333 0.00 0.00 34.72 5.34
1784 3813 6.174720 TCCCTTCGCAAATATAAGATGTCT 57.825 37.500 0.00 0.00 0.00 3.41
1794 3823 1.580059 ACTCCCTCCCTTCGCAAATA 58.420 50.000 0.00 0.00 0.00 1.40
1800 3829 6.912951 TTAAAGATATACTCCCTCCCTTCG 57.087 41.667 0.00 0.00 0.00 3.79
1804 3833 7.242322 ACGAATTAAAGATATACTCCCTCCC 57.758 40.000 0.00 0.00 0.00 4.30
1833 3868 2.228582 TGCAACAGATTGGTTGGAATCG 59.771 45.455 7.99 0.00 44.49 3.34
1838 3877 1.001068 TGCATGCAACAGATTGGTTGG 59.999 47.619 20.30 0.00 46.36 3.77
2099 4147 5.385198 GGAAATCAGGTCCATAAGCCAATA 58.615 41.667 0.00 0.00 35.05 1.90
2126 4174 7.363880 GGAGTTAGTTGGAAGATGACTGTATCA 60.364 40.741 0.00 0.00 43.13 2.15
2278 4412 7.277319 GCTTCCATGAGAAAAATTGGAGAAATC 59.723 37.037 0.00 0.00 39.33 2.17
2294 4429 4.913335 ATATGCACTTTGCTTCCATGAG 57.087 40.909 0.00 0.00 45.31 2.90
2335 4470 5.989168 CGTTCATATCAAAGCCCTATACACA 59.011 40.000 0.00 0.00 0.00 3.72
2404 4539 1.514983 TCATGGTGATCATCAGGGCT 58.485 50.000 19.78 0.00 32.92 5.19
2433 4568 1.971481 ATTAATGATCAGCGGCTGCA 58.029 45.000 24.78 17.76 46.23 4.41
2572 4728 0.251297 CCAACAACTGAGGGCATGGA 60.251 55.000 0.00 0.00 0.00 3.41
2616 4781 3.701532 TCGTCGTTGCAAATTTTTCCT 57.298 38.095 0.00 0.00 0.00 3.36
2640 4806 2.905996 ATCCCCGCTTGGTGCAGAA 61.906 57.895 0.00 0.00 43.06 3.02
2666 4832 9.801873 CCGTGACTTCAATTTTATTATGGAATT 57.198 29.630 0.00 0.00 0.00 2.17
2680 4846 5.280945 CAAAAACATGTCCGTGACTTCAAT 58.719 37.500 0.00 0.00 33.15 2.57
2690 4856 3.157932 ACAACACCAAAAACATGTCCG 57.842 42.857 0.00 0.00 0.00 4.79
2700 4866 5.422331 TCCAGGTATTGAAAACAACACCAAA 59.578 36.000 11.92 0.00 0.00 3.28
2725 4891 6.073003 GGTCTACAAAGATTGGAGTCTTGTTG 60.073 42.308 2.45 0.00 42.45 3.33
2865 5031 9.627123 ACAAACTATGTAATATAATGGCACACT 57.373 29.630 0.00 0.00 41.20 3.55
2882 5048 9.755064 CGGATAAGTAGAACAAAACAAACTATG 57.245 33.333 0.00 0.00 0.00 2.23
2883 5049 9.715121 TCGGATAAGTAGAACAAAACAAACTAT 57.285 29.630 0.00 0.00 0.00 2.12
2884 5050 9.715121 ATCGGATAAGTAGAACAAAACAAACTA 57.285 29.630 0.00 0.00 0.00 2.24
2885 5051 8.617290 ATCGGATAAGTAGAACAAAACAAACT 57.383 30.769 0.00 0.00 0.00 2.66
2886 5052 9.968743 CTATCGGATAAGTAGAACAAAACAAAC 57.031 33.333 0.00 0.00 0.00 2.93
2887 5053 9.158233 CCTATCGGATAAGTAGAACAAAACAAA 57.842 33.333 0.00 0.00 0.00 2.83
2888 5054 7.279313 GCCTATCGGATAAGTAGAACAAAACAA 59.721 37.037 0.00 0.00 0.00 2.83
2890 5056 6.985059 AGCCTATCGGATAAGTAGAACAAAAC 59.015 38.462 0.00 0.00 0.00 2.43
2901 5072 1.813178 TCTCGCAGCCTATCGGATAAG 59.187 52.381 0.00 0.00 0.00 1.73
2918 5089 2.125912 AGACGCGTGGCATGTCTC 60.126 61.111 20.70 0.00 38.55 3.36
2922 5093 1.142185 CTACTCAGACGCGTGGCATG 61.142 60.000 20.70 10.40 0.00 4.06
2962 5133 7.123383 TCTTCTCTCTCTCTCTCTGTCTAGTA 58.877 42.308 0.00 0.00 0.00 1.82
2965 5136 5.363868 CCTCTTCTCTCTCTCTCTCTGTCTA 59.636 48.000 0.00 0.00 0.00 2.59
2972 5143 4.164988 CCTCTTCCTCTTCTCTCTCTCTCT 59.835 50.000 0.00 0.00 0.00 3.10
2989 5160 4.261031 GCTCTCGTGAATCTAGTCCTCTTC 60.261 50.000 0.00 0.00 0.00 2.87
3019 5190 5.418209 TCACATGCATCATATTCACCAAACA 59.582 36.000 0.00 0.00 0.00 2.83
3021 5192 6.718522 ATCACATGCATCATATTCACCAAA 57.281 33.333 0.00 0.00 0.00 3.28
3080 5251 1.133598 CAGGTGTGCTGTAATGCATGG 59.866 52.381 0.00 0.00 45.23 3.66
3118 5289 1.557371 TGACAAGCGTCCATAATGGGA 59.443 47.619 0.00 0.00 41.85 4.37
3147 5329 3.834813 GACATGTCTCTGCCTATGGGATA 59.165 47.826 18.83 0.00 33.58 2.59
3148 5330 2.636893 GACATGTCTCTGCCTATGGGAT 59.363 50.000 18.83 0.00 33.58 3.85
3149 5331 2.042464 GACATGTCTCTGCCTATGGGA 58.958 52.381 18.83 0.00 33.58 4.37
3150 5332 1.071385 GGACATGTCTCTGCCTATGGG 59.929 57.143 24.50 0.00 0.00 4.00
3151 5333 1.269988 CGGACATGTCTCTGCCTATGG 60.270 57.143 24.50 0.00 0.00 2.74
3152 5334 1.410517 ACGGACATGTCTCTGCCTATG 59.589 52.381 24.50 6.86 0.00 2.23
3164 5346 4.494690 GCACTACATTGATTCACGGACATG 60.495 45.833 0.00 0.00 0.00 3.21
3175 5359 0.821517 TCGTCGGGCACTACATTGAT 59.178 50.000 0.00 0.00 0.00 2.57
3176 5360 0.108992 GTCGTCGGGCACTACATTGA 60.109 55.000 0.00 0.00 0.00 2.57
3192 5376 7.757173 CACCAATATATCCTGTGAATCTAGTCG 59.243 40.741 4.14 0.00 0.00 4.18
3231 5415 2.679336 TGAATGTGACATCGGCAGAATG 59.321 45.455 0.00 0.00 40.87 2.67
3246 5430 5.532406 CCCACGGAATAAATCTCATGAATGT 59.468 40.000 0.00 0.00 0.00 2.71
3277 5461 0.608035 GTGCCCCTGTGAATTTCCGA 60.608 55.000 0.00 0.00 0.00 4.55
3300 5485 2.042831 AGGTGCATGCCTTCGCTTC 61.043 57.895 16.68 0.00 34.71 3.86
3302 5487 2.749044 CAGGTGCATGCCTTCGCT 60.749 61.111 16.68 3.07 36.58 4.93
3306 5491 1.530013 GCTTGACAGGTGCATGCCTT 61.530 55.000 16.68 0.00 36.58 4.35
3312 5497 2.113774 CAGGGCTTGACAGGTGCA 59.886 61.111 0.00 0.00 0.00 4.57
3317 5502 3.429141 CTGCGCAGGGCTTGACAG 61.429 66.667 29.88 3.15 44.05 3.51
3331 5516 4.385405 AGTCACTGGAGCGGCTGC 62.385 66.667 15.13 15.13 43.24 5.25
3346 5531 1.060713 CAACTTCGTGAATCGCGAGT 58.939 50.000 18.35 13.42 46.71 4.18
3369 5554 0.392461 TTAGTGCCCTTGTGCGGATC 60.392 55.000 0.00 0.00 0.00 3.36
3370 5555 0.392998 CTTAGTGCCCTTGTGCGGAT 60.393 55.000 0.00 0.00 0.00 4.18
3371 5556 1.003839 CTTAGTGCCCTTGTGCGGA 60.004 57.895 0.00 0.00 0.00 5.54
3372 5557 0.889186 AACTTAGTGCCCTTGTGCGG 60.889 55.000 0.00 0.00 0.00 5.69
3373 5558 0.951558 AAACTTAGTGCCCTTGTGCG 59.048 50.000 0.00 0.00 0.00 5.34
3374 5559 2.360801 TGAAAACTTAGTGCCCTTGTGC 59.639 45.455 0.00 0.00 0.00 4.57
3375 5560 3.243401 GGTGAAAACTTAGTGCCCTTGTG 60.243 47.826 0.00 0.00 0.00 3.33
3376 5561 2.956333 GGTGAAAACTTAGTGCCCTTGT 59.044 45.455 0.00 0.00 0.00 3.16
3377 5562 2.031157 CGGTGAAAACTTAGTGCCCTTG 60.031 50.000 0.00 0.00 0.00 3.61
3378 5563 2.158726 TCGGTGAAAACTTAGTGCCCTT 60.159 45.455 0.00 0.00 0.00 3.95
3379 5564 1.418637 TCGGTGAAAACTTAGTGCCCT 59.581 47.619 0.00 0.00 0.00 5.19
3380 5565 1.886886 TCGGTGAAAACTTAGTGCCC 58.113 50.000 0.00 0.00 0.00 5.36
3381 5566 3.974871 TTTCGGTGAAAACTTAGTGCC 57.025 42.857 0.00 0.00 0.00 5.01
3382 5567 4.738252 CCTTTTTCGGTGAAAACTTAGTGC 59.262 41.667 4.32 0.00 40.56 4.40
3383 5568 4.738252 GCCTTTTTCGGTGAAAACTTAGTG 59.262 41.667 4.32 0.00 40.56 2.74
3384 5569 4.643334 AGCCTTTTTCGGTGAAAACTTAGT 59.357 37.500 4.32 0.00 40.56 2.24
3385 5570 5.183014 AGCCTTTTTCGGTGAAAACTTAG 57.817 39.130 4.32 0.87 40.56 2.18
3386 5571 5.824097 AGTAGCCTTTTTCGGTGAAAACTTA 59.176 36.000 4.32 0.00 40.56 2.24
3387 5572 4.643334 AGTAGCCTTTTTCGGTGAAAACTT 59.357 37.500 4.32 0.00 40.56 2.66
3388 5573 4.204799 AGTAGCCTTTTTCGGTGAAAACT 58.795 39.130 4.32 2.49 40.56 2.66
3389 5574 4.534168 GAGTAGCCTTTTTCGGTGAAAAC 58.466 43.478 4.32 0.00 40.56 2.43
3390 5575 3.249080 CGAGTAGCCTTTTTCGGTGAAAA 59.751 43.478 0.81 0.81 39.36 2.29
3391 5576 2.803956 CGAGTAGCCTTTTTCGGTGAAA 59.196 45.455 0.00 0.00 0.00 2.69
3392 5577 2.224113 ACGAGTAGCCTTTTTCGGTGAA 60.224 45.455 0.00 0.00 37.38 3.18
3393 5578 1.342174 ACGAGTAGCCTTTTTCGGTGA 59.658 47.619 0.00 0.00 37.38 4.02
3394 5579 1.725164 GACGAGTAGCCTTTTTCGGTG 59.275 52.381 0.00 0.00 37.38 4.94
3395 5580 1.337541 GGACGAGTAGCCTTTTTCGGT 60.338 52.381 0.00 0.00 37.38 4.69
3396 5581 1.356938 GGACGAGTAGCCTTTTTCGG 58.643 55.000 0.00 0.00 37.38 4.30
3397 5582 1.356938 GGGACGAGTAGCCTTTTTCG 58.643 55.000 0.00 0.00 38.88 3.46
3419 5604 4.819630 CCCGGCAGTTGCTTTATCTATAAA 59.180 41.667 0.00 0.00 41.70 1.40
3420 5605 4.101898 TCCCGGCAGTTGCTTTATCTATAA 59.898 41.667 0.00 0.00 41.70 0.98
3421 5606 3.644265 TCCCGGCAGTTGCTTTATCTATA 59.356 43.478 0.00 0.00 41.70 1.31
3422 5607 2.438021 TCCCGGCAGTTGCTTTATCTAT 59.562 45.455 0.00 0.00 41.70 1.98
3423 5608 1.834896 TCCCGGCAGTTGCTTTATCTA 59.165 47.619 0.00 0.00 41.70 1.98
3424 5609 0.618458 TCCCGGCAGTTGCTTTATCT 59.382 50.000 0.00 0.00 41.70 1.98
3425 5610 1.132453 GTTCCCGGCAGTTGCTTTATC 59.868 52.381 0.00 0.00 41.70 1.75
3426 5611 1.173913 GTTCCCGGCAGTTGCTTTAT 58.826 50.000 0.00 0.00 41.70 1.40
3427 5612 0.891904 GGTTCCCGGCAGTTGCTTTA 60.892 55.000 0.00 0.00 41.70 1.85
3428 5613 2.200337 GGTTCCCGGCAGTTGCTTT 61.200 57.895 0.00 0.00 41.70 3.51
3429 5614 2.597510 GGTTCCCGGCAGTTGCTT 60.598 61.111 0.00 0.00 41.70 3.91
3430 5615 3.884774 TGGTTCCCGGCAGTTGCT 61.885 61.111 0.00 0.00 41.70 3.91
3431 5616 3.670377 GTGGTTCCCGGCAGTTGC 61.670 66.667 0.00 0.00 41.14 4.17
3432 5617 1.826054 TTGTGGTTCCCGGCAGTTG 60.826 57.895 0.00 0.00 0.00 3.16
3433 5618 1.826487 GTTGTGGTTCCCGGCAGTT 60.826 57.895 0.00 0.00 0.00 3.16
3434 5619 2.203294 GTTGTGGTTCCCGGCAGT 60.203 61.111 0.00 0.00 0.00 4.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.