Multiple sequence alignment - TraesCS7B01G455700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G455700 chr7B 100.000 3323 0 0 1 3323 716309410 716306088 0.000000e+00 6137.0
1 TraesCS7B01G455700 chr7B 80.912 1053 147 35 1705 2738 716315448 716314431 0.000000e+00 782.0
2 TraesCS7B01G455700 chr7B 84.016 732 91 16 1212 1940 716466949 716466241 0.000000e+00 680.0
3 TraesCS7B01G455700 chr7B 87.751 498 59 2 1211 1707 716315999 716315503 6.180000e-162 580.0
4 TraesCS7B01G455700 chr7B 78.611 907 134 38 2051 2929 717000382 717001256 2.250000e-151 545.0
5 TraesCS7B01G455700 chr7B 86.722 482 63 1 1215 1696 716370174 716369694 4.880000e-148 534.0
6 TraesCS7B01G455700 chr7B 77.812 649 92 32 2157 2799 716465798 716465196 1.470000e-93 353.0
7 TraesCS7B01G455700 chr7B 87.045 247 30 2 1753 1998 716369508 716369263 9.080000e-71 278.0
8 TraesCS7B01G455700 chr7B 84.672 274 31 3 1736 1999 717000028 717000300 2.540000e-66 263.0
9 TraesCS7B01G455700 chr7A 90.015 1953 129 26 665 2614 714760206 714758317 0.000000e+00 2466.0
10 TraesCS7B01G455700 chr7A 86.736 573 35 7 2613 3148 714758282 714757714 1.710000e-167 599.0
11 TraesCS7B01G455700 chr7A 86.417 508 61 6 1178 1679 714823204 714822699 1.740000e-152 549.0
12 TraesCS7B01G455700 chr7A 78.299 917 134 34 1736 2637 714822665 714821799 6.310000e-147 531.0
13 TraesCS7B01G455700 chr7A 79.124 388 24 21 134 506 714760550 714760205 7.220000e-52 215.0
14 TraesCS7B01G455700 chr7A 96.629 89 3 0 18 106 714984846 714984758 7.430000e-32 148.0
15 TraesCS7B01G455700 chr7A 86.735 98 5 1 3154 3243 714757331 714757234 5.870000e-18 102.0
16 TraesCS7B01G455700 chr7D 90.072 1390 104 20 670 2040 620197063 620198437 0.000000e+00 1772.0
17 TraesCS7B01G455700 chr7D 81.718 1269 170 24 1211 2459 620116277 620117503 0.000000e+00 1002.0
18 TraesCS7B01G455700 chr7D 85.476 840 81 18 2062 2884 620198540 620199355 0.000000e+00 837.0
19 TraesCS7B01G455700 chr7D 82.022 801 104 20 1211 1999 620143055 620143827 0.000000e+00 645.0
20 TraesCS7B01G455700 chr7D 81.224 719 110 17 984 1693 620085477 620086179 1.040000e-154 556.0
21 TraesCS7B01G455700 chr7D 79.302 802 126 25 2051 2839 620143911 620144685 2.940000e-145 525.0
22 TraesCS7B01G455700 chr7D 79.293 396 26 22 134 516 620196718 620197070 3.340000e-55 226.0
23 TraesCS7B01G455700 chrUn 86.578 529 63 6 1177 1699 466806753 466807279 7.990000e-161 577.0
24 TraesCS7B01G455700 chr6A 96.951 164 5 0 504 667 73573912 73573749 3.270000e-70 276.0
25 TraesCS7B01G455700 chr6A 96.970 33 1 0 202 234 31797240 31797272 4.630000e-04 56.5
26 TraesCS7B01G455700 chr1D 96.319 163 6 0 505 667 314000322 314000484 5.460000e-68 268.0
27 TraesCS7B01G455700 chr1B 95.210 167 8 0 502 668 183877364 183877198 7.070000e-67 265.0
28 TraesCS7B01G455700 chr4B 95.706 163 7 0 505 667 660120761 660120599 2.540000e-66 263.0
29 TraesCS7B01G455700 chr4B 92.697 178 11 2 491 666 483266556 483266379 4.250000e-64 255.0
30 TraesCS7B01G455700 chr4A 95.706 163 7 0 504 666 199801109 199801271 2.540000e-66 263.0
31 TraesCS7B01G455700 chr6B 94.611 167 9 0 501 667 482170725 482170891 3.290000e-65 259.0
32 TraesCS7B01G455700 chr3D 94.675 169 6 2 500 666 486424954 486424787 3.290000e-65 259.0
33 TraesCS7B01G455700 chr2B 92.614 176 12 1 497 671 708240688 708240513 5.500000e-63 252.0
34 TraesCS7B01G455700 chr3A 96.970 33 1 0 198 230 533087563 533087531 4.630000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G455700 chr7B 716306088 716309410 3322 True 6137.0 6137 100.0000 1 3323 1 chr7B.!!$R1 3322
1 TraesCS7B01G455700 chr7B 716314431 716315999 1568 True 681.0 782 84.3315 1211 2738 2 chr7B.!!$R2 1527
2 TraesCS7B01G455700 chr7B 716465196 716466949 1753 True 516.5 680 80.9140 1212 2799 2 chr7B.!!$R4 1587
3 TraesCS7B01G455700 chr7B 716369263 716370174 911 True 406.0 534 86.8835 1215 1998 2 chr7B.!!$R3 783
4 TraesCS7B01G455700 chr7B 717000028 717001256 1228 False 404.0 545 81.6415 1736 2929 2 chr7B.!!$F1 1193
5 TraesCS7B01G455700 chr7A 714757234 714760550 3316 True 845.5 2466 85.6525 134 3243 4 chr7A.!!$R2 3109
6 TraesCS7B01G455700 chr7A 714821799 714823204 1405 True 540.0 549 82.3580 1178 2637 2 chr7A.!!$R3 1459
7 TraesCS7B01G455700 chr7D 620116277 620117503 1226 False 1002.0 1002 81.7180 1211 2459 1 chr7D.!!$F2 1248
8 TraesCS7B01G455700 chr7D 620196718 620199355 2637 False 945.0 1772 84.9470 134 2884 3 chr7D.!!$F4 2750
9 TraesCS7B01G455700 chr7D 620143055 620144685 1630 False 585.0 645 80.6620 1211 2839 2 chr7D.!!$F3 1628
10 TraesCS7B01G455700 chr7D 620085477 620086179 702 False 556.0 556 81.2240 984 1693 1 chr7D.!!$F1 709
11 TraesCS7B01G455700 chrUn 466806753 466807279 526 False 577.0 577 86.5780 1177 1699 1 chrUn.!!$F1 522

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
917 940 0.105913 GACCAACCAACCTTTCCCCA 60.106 55.0 0.00 0.0 0.00 4.96 F
2060 2571 0.242825 TGCGCTCTAAAGTACGTGCT 59.757 50.0 9.73 0.0 34.25 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2074 2597 0.741221 GTTGGTGAGCCGAGATGGTC 60.741 60.0 0.0 0.0 41.21 4.02 R
3297 4332 0.104304 ATCGACGAATGTAGGCACCC 59.896 55.0 0.0 0.0 0.00 4.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
44 45 7.645058 TCATGTGTATCTCATGACTAGACAA 57.355 36.000 12.07 2.22 44.14 3.18
45 46 8.066612 TCATGTGTATCTCATGACTAGACAAA 57.933 34.615 12.07 4.66 44.14 2.83
46 47 8.531146 TCATGTGTATCTCATGACTAGACAAAA 58.469 33.333 12.07 2.66 44.14 2.44
47 48 8.815189 CATGTGTATCTCATGACTAGACAAAAG 58.185 37.037 12.07 0.00 43.47 2.27
48 49 7.323420 TGTGTATCTCATGACTAGACAAAAGG 58.677 38.462 0.00 0.00 0.00 3.11
49 50 6.256757 GTGTATCTCATGACTAGACAAAAGGC 59.743 42.308 0.00 0.00 0.00 4.35
50 51 4.207891 TCTCATGACTAGACAAAAGGCC 57.792 45.455 0.00 0.00 0.00 5.19
51 52 3.840666 TCTCATGACTAGACAAAAGGCCT 59.159 43.478 0.00 0.00 0.00 5.19
52 53 5.023452 TCTCATGACTAGACAAAAGGCCTA 58.977 41.667 5.16 0.00 0.00 3.93
53 54 5.663106 TCTCATGACTAGACAAAAGGCCTAT 59.337 40.000 5.16 0.00 0.00 2.57
54 55 5.918608 TCATGACTAGACAAAAGGCCTATC 58.081 41.667 5.16 1.33 0.00 2.08
55 56 5.425217 TCATGACTAGACAAAAGGCCTATCA 59.575 40.000 5.16 0.00 0.00 2.15
56 57 5.086104 TGACTAGACAAAAGGCCTATCAC 57.914 43.478 5.16 0.00 0.00 3.06
57 58 4.081087 TGACTAGACAAAAGGCCTATCACC 60.081 45.833 5.16 0.00 0.00 4.02
58 59 4.104831 ACTAGACAAAAGGCCTATCACCT 58.895 43.478 5.16 3.74 40.02 4.00
59 60 5.278061 ACTAGACAAAAGGCCTATCACCTA 58.722 41.667 5.16 4.82 36.14 3.08
60 61 5.905913 ACTAGACAAAAGGCCTATCACCTAT 59.094 40.000 5.16 0.00 36.14 2.57
61 62 5.717119 AGACAAAAGGCCTATCACCTATT 57.283 39.130 5.16 0.00 36.14 1.73
62 63 5.685728 AGACAAAAGGCCTATCACCTATTC 58.314 41.667 5.16 0.00 36.14 1.75
63 64 4.793201 ACAAAAGGCCTATCACCTATTCC 58.207 43.478 5.16 0.00 36.14 3.01
64 65 4.229582 ACAAAAGGCCTATCACCTATTCCA 59.770 41.667 5.16 0.00 36.14 3.53
65 66 5.200483 CAAAAGGCCTATCACCTATTCCAA 58.800 41.667 5.16 0.00 36.14 3.53
66 67 5.466127 AAAGGCCTATCACCTATTCCAAA 57.534 39.130 5.16 0.00 36.14 3.28
67 68 4.439253 AGGCCTATCACCTATTCCAAAC 57.561 45.455 1.29 0.00 35.10 2.93
68 69 3.785887 AGGCCTATCACCTATTCCAAACA 59.214 43.478 1.29 0.00 35.10 2.83
69 70 4.229582 AGGCCTATCACCTATTCCAAACAA 59.770 41.667 1.29 0.00 35.10 2.83
70 71 5.103515 AGGCCTATCACCTATTCCAAACAAT 60.104 40.000 1.29 0.00 35.10 2.71
71 72 5.598417 GGCCTATCACCTATTCCAAACAATT 59.402 40.000 0.00 0.00 0.00 2.32
72 73 6.098266 GGCCTATCACCTATTCCAAACAATTT 59.902 38.462 0.00 0.00 0.00 1.82
73 74 7.364673 GGCCTATCACCTATTCCAAACAATTTT 60.365 37.037 0.00 0.00 0.00 1.82
74 75 8.040727 GCCTATCACCTATTCCAAACAATTTTT 58.959 33.333 0.00 0.00 0.00 1.94
78 79 7.902087 TCACCTATTCCAAACAATTTTTAGGG 58.098 34.615 0.00 0.00 31.30 3.53
79 80 7.730784 TCACCTATTCCAAACAATTTTTAGGGA 59.269 33.333 0.00 0.00 31.30 4.20
80 81 8.539544 CACCTATTCCAAACAATTTTTAGGGAT 58.460 33.333 0.00 0.00 31.30 3.85
81 82 9.777008 ACCTATTCCAAACAATTTTTAGGGATA 57.223 29.630 0.00 0.00 31.30 2.59
85 86 8.819643 TTCCAAACAATTTTTAGGGATAAACG 57.180 30.769 0.13 0.00 0.00 3.60
86 87 7.953752 TCCAAACAATTTTTAGGGATAAACGT 58.046 30.769 0.00 0.00 0.00 3.99
87 88 8.083462 TCCAAACAATTTTTAGGGATAAACGTC 58.917 33.333 0.00 0.00 0.00 4.34
88 89 7.868415 CCAAACAATTTTTAGGGATAAACGTCA 59.132 33.333 0.00 0.00 0.00 4.35
89 90 8.696175 CAAACAATTTTTAGGGATAAACGTCAC 58.304 33.333 0.00 0.00 0.00 3.67
90 91 7.513371 ACAATTTTTAGGGATAAACGTCACA 57.487 32.000 0.00 0.00 0.00 3.58
91 92 7.590279 ACAATTTTTAGGGATAAACGTCACAG 58.410 34.615 0.00 0.00 0.00 3.66
92 93 6.753107 ATTTTTAGGGATAAACGTCACAGG 57.247 37.500 0.00 0.00 0.00 4.00
93 94 5.486735 TTTTAGGGATAAACGTCACAGGA 57.513 39.130 0.00 0.00 0.00 3.86
94 95 5.687166 TTTAGGGATAAACGTCACAGGAT 57.313 39.130 0.00 0.00 0.00 3.24
95 96 3.821421 AGGGATAAACGTCACAGGATC 57.179 47.619 0.00 0.00 0.00 3.36
96 97 3.375699 AGGGATAAACGTCACAGGATCT 58.624 45.455 0.00 0.00 0.00 2.75
97 98 3.775316 AGGGATAAACGTCACAGGATCTT 59.225 43.478 0.00 0.00 0.00 2.40
98 99 4.960469 AGGGATAAACGTCACAGGATCTTA 59.040 41.667 0.00 0.00 0.00 2.10
99 100 5.424252 AGGGATAAACGTCACAGGATCTTAA 59.576 40.000 0.00 0.00 0.00 1.85
100 101 5.753921 GGGATAAACGTCACAGGATCTTAAG 59.246 44.000 0.00 0.00 0.00 1.85
101 102 5.234543 GGATAAACGTCACAGGATCTTAAGC 59.765 44.000 0.00 0.00 0.00 3.09
102 103 2.674796 ACGTCACAGGATCTTAAGCC 57.325 50.000 0.00 0.00 0.00 4.35
103 104 2.180276 ACGTCACAGGATCTTAAGCCT 58.820 47.619 0.00 0.00 43.95 4.58
104 105 3.362706 ACGTCACAGGATCTTAAGCCTA 58.637 45.455 0.00 0.00 40.06 3.93
105 106 3.381908 ACGTCACAGGATCTTAAGCCTAG 59.618 47.826 0.00 0.00 40.06 3.02
106 107 3.632604 CGTCACAGGATCTTAAGCCTAGA 59.367 47.826 0.00 0.00 40.06 2.43
107 108 4.279671 CGTCACAGGATCTTAAGCCTAGAT 59.720 45.833 0.00 0.00 40.06 1.98
108 109 5.473846 CGTCACAGGATCTTAAGCCTAGATA 59.526 44.000 0.00 0.00 40.06 1.98
109 110 6.151985 CGTCACAGGATCTTAAGCCTAGATAT 59.848 42.308 0.00 0.00 40.06 1.63
110 111 7.309499 CGTCACAGGATCTTAAGCCTAGATATT 60.309 40.741 0.00 0.00 40.06 1.28
111 112 8.032451 GTCACAGGATCTTAAGCCTAGATATTC 58.968 40.741 0.00 0.00 40.06 1.75
112 113 7.952930 TCACAGGATCTTAAGCCTAGATATTCT 59.047 37.037 0.00 0.00 40.06 2.40
113 114 8.592809 CACAGGATCTTAAGCCTAGATATTCTT 58.407 37.037 0.00 0.00 40.06 2.52
114 115 8.592809 ACAGGATCTTAAGCCTAGATATTCTTG 58.407 37.037 0.00 0.00 40.06 3.02
115 116 8.040132 CAGGATCTTAAGCCTAGATATTCTTGG 58.960 40.741 0.00 1.27 40.06 3.61
116 117 7.737149 AGGATCTTAAGCCTAGATATTCTTGGT 59.263 37.037 0.00 0.00 40.33 3.67
117 118 9.036980 GGATCTTAAGCCTAGATATTCTTGGTA 57.963 37.037 0.00 0.00 40.73 3.25
173 174 7.880195 AGATATTTGCAGATTTTCGTATAGGCT 59.120 33.333 0.00 0.00 0.00 4.58
183 184 5.927281 TTTCGTATAGGCTAGGTCAAACT 57.073 39.130 0.00 0.00 0.00 2.66
189 190 6.645415 CGTATAGGCTAGGTCAAACTTAATGG 59.355 42.308 0.00 0.00 0.00 3.16
239 242 9.527157 TTGAAATGAAGGGAGTATTATGAAACA 57.473 29.630 0.00 0.00 0.00 2.83
240 243 9.699410 TGAAATGAAGGGAGTATTATGAAACAT 57.301 29.630 0.00 0.00 0.00 2.71
245 248 9.573166 TGAAGGGAGTATTATGAAACATTATGG 57.427 33.333 0.00 0.00 0.00 2.74
246 249 8.940397 AAGGGAGTATTATGAAACATTATGGG 57.060 34.615 0.00 0.00 0.00 4.00
247 250 8.287904 AGGGAGTATTATGAAACATTATGGGA 57.712 34.615 0.00 0.00 0.00 4.37
248 251 8.904963 AGGGAGTATTATGAAACATTATGGGAT 58.095 33.333 0.00 0.00 0.00 3.85
328 341 2.159531 TGTTGATTAAGATGCTGTGCGC 60.160 45.455 0.00 0.00 39.77 6.09
349 362 2.227388 CAGGTGGCTTTGCTAGTTTCAG 59.773 50.000 0.00 0.00 0.00 3.02
352 365 3.057946 GGTGGCTTTGCTAGTTTCAGAAG 60.058 47.826 0.00 0.00 0.00 2.85
357 370 4.517075 GCTTTGCTAGTTTCAGAAGGAAGT 59.483 41.667 0.00 0.00 36.72 3.01
358 371 5.701290 GCTTTGCTAGTTTCAGAAGGAAGTA 59.299 40.000 0.00 0.00 36.72 2.24
359 372 6.128418 GCTTTGCTAGTTTCAGAAGGAAGTAG 60.128 42.308 0.00 0.00 36.72 2.57
360 373 6.665992 TTGCTAGTTTCAGAAGGAAGTAGA 57.334 37.500 3.18 0.00 36.72 2.59
361 374 6.859112 TGCTAGTTTCAGAAGGAAGTAGAT 57.141 37.500 3.18 0.00 36.72 1.98
363 376 7.324178 TGCTAGTTTCAGAAGGAAGTAGATTC 58.676 38.462 3.18 0.00 36.72 2.52
364 377 6.474102 GCTAGTTTCAGAAGGAAGTAGATTCG 59.526 42.308 3.18 0.00 38.95 3.34
365 378 6.347859 AGTTTCAGAAGGAAGTAGATTCGT 57.652 37.500 0.00 0.00 38.95 3.85
366 379 6.391537 AGTTTCAGAAGGAAGTAGATTCGTC 58.608 40.000 0.00 0.00 38.95 4.20
367 380 5.977489 TTCAGAAGGAAGTAGATTCGTCA 57.023 39.130 0.00 0.00 38.95 4.35
368 381 6.531503 TTCAGAAGGAAGTAGATTCGTCAT 57.468 37.500 0.00 0.00 38.95 3.06
369 382 6.531503 TCAGAAGGAAGTAGATTCGTCATT 57.468 37.500 0.00 0.00 38.95 2.57
370 383 6.565234 TCAGAAGGAAGTAGATTCGTCATTC 58.435 40.000 0.00 0.00 38.95 2.67
371 384 5.457148 CAGAAGGAAGTAGATTCGTCATTCG 59.543 44.000 0.00 0.00 39.85 3.34
372 385 4.985538 AGGAAGTAGATTCGTCATTCGT 57.014 40.909 0.00 0.00 38.95 3.85
373 386 4.673441 AGGAAGTAGATTCGTCATTCGTG 58.327 43.478 0.00 0.00 38.95 4.35
374 387 3.243177 GGAAGTAGATTCGTCATTCGTGC 59.757 47.826 0.00 0.00 38.95 5.34
375 388 3.503827 AGTAGATTCGTCATTCGTGCA 57.496 42.857 0.00 0.00 40.80 4.57
376 389 4.046938 AGTAGATTCGTCATTCGTGCAT 57.953 40.909 0.00 0.00 40.80 3.96
377 390 3.798878 AGTAGATTCGTCATTCGTGCATG 59.201 43.478 0.00 0.00 40.80 4.06
381 394 1.507562 TCGTCATTCGTGCATGTGTT 58.492 45.000 5.68 0.00 40.80 3.32
425 438 4.031028 CACGTGATGCTAATTGCTAAAGC 58.969 43.478 10.90 0.00 43.37 3.51
445 458 3.452627 AGCACCATATCTCGAGAAACCTT 59.547 43.478 20.91 4.82 0.00 3.50
484 500 1.640917 TAGAGACGGGAGCCACTTTT 58.359 50.000 0.00 0.00 0.00 2.27
503 519 7.360438 CCACTTTTCTCTAATGAGCACACTAAC 60.360 40.741 0.00 0.00 40.03 2.34
504 520 7.386299 CACTTTTCTCTAATGAGCACACTAACT 59.614 37.037 0.00 0.00 40.03 2.24
505 521 8.585881 ACTTTTCTCTAATGAGCACACTAACTA 58.414 33.333 0.00 0.00 40.03 2.24
506 522 8.758633 TTTTCTCTAATGAGCACACTAACTAC 57.241 34.615 0.00 0.00 40.03 2.73
507 523 7.704578 TTCTCTAATGAGCACACTAACTACT 57.295 36.000 0.00 0.00 40.03 2.57
508 524 7.323049 TCTCTAATGAGCACACTAACTACTC 57.677 40.000 0.00 0.00 40.03 2.59
509 525 6.319152 TCTCTAATGAGCACACTAACTACTCC 59.681 42.308 0.00 0.00 40.03 3.85
510 526 4.473477 AATGAGCACACTAACTACTCCC 57.527 45.455 0.00 0.00 0.00 4.30
511 527 3.170991 TGAGCACACTAACTACTCCCT 57.829 47.619 0.00 0.00 0.00 4.20
512 528 3.090037 TGAGCACACTAACTACTCCCTC 58.910 50.000 0.00 0.00 0.00 4.30
513 529 2.427812 GAGCACACTAACTACTCCCTCC 59.572 54.545 0.00 0.00 0.00 4.30
514 530 1.134560 GCACACTAACTACTCCCTCCG 59.865 57.143 0.00 0.00 0.00 4.63
515 531 2.444421 CACACTAACTACTCCCTCCGT 58.556 52.381 0.00 0.00 0.00 4.69
516 532 2.824341 CACACTAACTACTCCCTCCGTT 59.176 50.000 0.00 0.00 0.00 4.44
517 533 3.087781 ACACTAACTACTCCCTCCGTTC 58.912 50.000 0.00 0.00 0.00 3.95
518 534 2.426381 CACTAACTACTCCCTCCGTTCC 59.574 54.545 0.00 0.00 0.00 3.62
519 535 2.311243 ACTAACTACTCCCTCCGTTCCT 59.689 50.000 0.00 0.00 0.00 3.36
520 536 3.525199 ACTAACTACTCCCTCCGTTCCTA 59.475 47.826 0.00 0.00 0.00 2.94
521 537 3.463048 AACTACTCCCTCCGTTCCTAA 57.537 47.619 0.00 0.00 0.00 2.69
522 538 3.463048 ACTACTCCCTCCGTTCCTAAA 57.537 47.619 0.00 0.00 0.00 1.85
523 539 3.991683 ACTACTCCCTCCGTTCCTAAAT 58.008 45.455 0.00 0.00 0.00 1.40
524 540 5.134725 ACTACTCCCTCCGTTCCTAAATA 57.865 43.478 0.00 0.00 0.00 1.40
525 541 5.713807 ACTACTCCCTCCGTTCCTAAATAT 58.286 41.667 0.00 0.00 0.00 1.28
526 542 6.856757 ACTACTCCCTCCGTTCCTAAATATA 58.143 40.000 0.00 0.00 0.00 0.86
527 543 7.300658 ACTACTCCCTCCGTTCCTAAATATAA 58.699 38.462 0.00 0.00 0.00 0.98
528 544 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
529 545 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
530 546 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
531 547 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
532 548 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
533 549 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
534 550 7.441458 CCCTCCGTTCCTAAATATAAGTCTTTG 59.559 40.741 0.00 0.00 0.00 2.77
535 551 7.985752 CCTCCGTTCCTAAATATAAGTCTTTGT 59.014 37.037 0.00 0.00 0.00 2.83
555 571 9.958180 TCTTTGTAGAGATTTCATTATGAACCA 57.042 29.630 7.19 0.00 35.89 3.67
556 572 9.994432 CTTTGTAGAGATTTCATTATGAACCAC 57.006 33.333 7.19 2.67 35.89 4.16
557 573 9.513906 TTTGTAGAGATTTCATTATGAACCACA 57.486 29.630 7.19 0.00 35.89 4.17
558 574 9.685276 TTGTAGAGATTTCATTATGAACCACAT 57.315 29.630 7.19 0.00 35.89 3.21
561 577 8.370493 AGAGATTTCATTATGAACCACATACG 57.630 34.615 7.19 0.00 40.62 3.06
562 578 7.442364 AGAGATTTCATTATGAACCACATACGG 59.558 37.037 7.19 0.00 40.62 4.02
563 579 7.279615 AGATTTCATTATGAACCACATACGGA 58.720 34.615 7.19 0.00 40.62 4.69
564 580 7.939039 AGATTTCATTATGAACCACATACGGAT 59.061 33.333 7.19 0.00 40.62 4.18
565 581 6.859420 TTCATTATGAACCACATACGGATG 57.141 37.500 5.94 5.94 40.62 3.51
566 582 6.353323 TTCATTATGAACCACATACGGATGT 58.647 36.000 7.68 7.68 40.62 3.06
567 583 7.056844 TCATTATGAACCACATACGGATGTA 57.943 36.000 14.23 0.00 44.82 2.29
568 584 7.676004 TCATTATGAACCACATACGGATGTAT 58.324 34.615 14.23 5.54 44.82 2.29
569 585 8.808092 TCATTATGAACCACATACGGATGTATA 58.192 33.333 14.23 4.47 44.82 1.47
570 586 9.599866 CATTATGAACCACATACGGATGTATAT 57.400 33.333 14.23 1.68 44.82 0.86
573 589 8.589701 ATGAACCACATACGGATGTATATAGA 57.410 34.615 14.23 0.00 44.82 1.98
574 590 8.589701 TGAACCACATACGGATGTATATAGAT 57.410 34.615 14.23 0.00 44.82 1.98
575 591 8.466798 TGAACCACATACGGATGTATATAGATG 58.533 37.037 14.23 0.00 44.82 2.90
576 592 6.806751 ACCACATACGGATGTATATAGATGC 58.193 40.000 14.23 0.00 44.82 3.91
577 593 6.379988 ACCACATACGGATGTATATAGATGCA 59.620 38.462 14.23 0.00 44.82 3.96
578 594 7.069950 ACCACATACGGATGTATATAGATGCAT 59.930 37.037 14.23 0.00 44.82 3.96
579 595 7.928167 CCACATACGGATGTATATAGATGCATT 59.072 37.037 14.23 1.23 44.82 3.56
580 596 9.317936 CACATACGGATGTATATAGATGCATTT 57.682 33.333 14.23 0.00 44.82 2.32
581 597 9.890629 ACATACGGATGTATATAGATGCATTTT 57.109 29.630 12.79 0.00 44.77 1.82
585 601 9.809096 ACGGATGTATATAGATGCATTTTAGAG 57.191 33.333 11.19 0.00 38.38 2.43
586 602 9.809096 CGGATGTATATAGATGCATTTTAGAGT 57.191 33.333 11.19 0.00 38.38 3.24
597 613 9.624373 AGATGCATTTTAGAGTGTAGATTCATT 57.376 29.630 0.00 0.00 0.00 2.57
598 614 9.875675 GATGCATTTTAGAGTGTAGATTCATTC 57.124 33.333 0.00 0.00 0.00 2.67
599 615 8.791327 TGCATTTTAGAGTGTAGATTCATTCA 57.209 30.769 0.00 0.00 0.00 2.57
600 616 9.399797 TGCATTTTAGAGTGTAGATTCATTCAT 57.600 29.630 0.00 0.00 0.00 2.57
606 622 7.934855 AGAGTGTAGATTCATTCATTTTGCT 57.065 32.000 0.00 0.00 0.00 3.91
607 623 7.983307 AGAGTGTAGATTCATTCATTTTGCTC 58.017 34.615 0.00 0.00 0.00 4.26
608 624 7.066766 AGAGTGTAGATTCATTCATTTTGCTCC 59.933 37.037 0.00 0.00 0.00 4.70
609 625 5.967674 GTGTAGATTCATTCATTTTGCTCCG 59.032 40.000 0.00 0.00 0.00 4.63
610 626 5.647658 TGTAGATTCATTCATTTTGCTCCGT 59.352 36.000 0.00 0.00 0.00 4.69
611 627 6.821160 TGTAGATTCATTCATTTTGCTCCGTA 59.179 34.615 0.00 0.00 0.00 4.02
612 628 6.949352 AGATTCATTCATTTTGCTCCGTAT 57.051 33.333 0.00 0.00 0.00 3.06
613 629 6.732154 AGATTCATTCATTTTGCTCCGTATG 58.268 36.000 0.00 0.00 0.00 2.39
614 630 5.895636 TTCATTCATTTTGCTCCGTATGT 57.104 34.783 0.00 0.00 0.00 2.29
615 631 6.993786 TTCATTCATTTTGCTCCGTATGTA 57.006 33.333 0.00 0.00 0.00 2.29
616 632 6.603237 TCATTCATTTTGCTCCGTATGTAG 57.397 37.500 0.00 0.00 0.00 2.74
617 633 6.112734 TCATTCATTTTGCTCCGTATGTAGT 58.887 36.000 0.00 0.00 0.00 2.73
618 634 6.257849 TCATTCATTTTGCTCCGTATGTAGTC 59.742 38.462 0.00 0.00 0.00 2.59
619 635 4.439057 TCATTTTGCTCCGTATGTAGTCC 58.561 43.478 0.00 0.00 0.00 3.85
620 636 3.965379 TTTTGCTCCGTATGTAGTCCA 57.035 42.857 0.00 0.00 0.00 4.02
621 637 4.481368 TTTTGCTCCGTATGTAGTCCAT 57.519 40.909 0.00 0.00 37.58 3.41
622 638 3.452755 TTGCTCCGTATGTAGTCCATG 57.547 47.619 0.00 0.00 34.86 3.66
623 639 1.686587 TGCTCCGTATGTAGTCCATGG 59.313 52.381 4.97 4.97 34.86 3.66
624 640 1.687123 GCTCCGTATGTAGTCCATGGT 59.313 52.381 12.58 0.00 34.86 3.55
625 641 2.889045 GCTCCGTATGTAGTCCATGGTA 59.111 50.000 12.58 0.00 34.86 3.25
626 642 3.319972 GCTCCGTATGTAGTCCATGGTAA 59.680 47.826 12.58 0.00 34.86 2.85
627 643 4.202182 GCTCCGTATGTAGTCCATGGTAAA 60.202 45.833 12.58 0.00 34.86 2.01
628 644 5.682990 GCTCCGTATGTAGTCCATGGTAAAA 60.683 44.000 12.58 0.00 34.86 1.52
629 645 6.488769 TCCGTATGTAGTCCATGGTAAAAT 57.511 37.500 12.58 1.85 34.86 1.82
630 646 6.518493 TCCGTATGTAGTCCATGGTAAAATC 58.482 40.000 12.58 0.00 34.86 2.17
631 647 5.699458 CCGTATGTAGTCCATGGTAAAATCC 59.301 44.000 12.58 0.00 34.86 3.01
632 648 5.699458 CGTATGTAGTCCATGGTAAAATCCC 59.301 44.000 12.58 0.00 34.86 3.85
633 649 5.994416 ATGTAGTCCATGGTAAAATCCCT 57.006 39.130 12.58 0.00 30.69 4.20
634 650 7.256048 CGTATGTAGTCCATGGTAAAATCCCTA 60.256 40.741 12.58 0.00 34.86 3.53
635 651 6.243216 TGTAGTCCATGGTAAAATCCCTAC 57.757 41.667 12.58 10.09 0.00 3.18
636 652 5.727279 TGTAGTCCATGGTAAAATCCCTACA 59.273 40.000 12.58 12.17 32.27 2.74
637 653 5.789574 AGTCCATGGTAAAATCCCTACAA 57.210 39.130 12.58 0.00 0.00 2.41
638 654 6.147437 AGTCCATGGTAAAATCCCTACAAA 57.853 37.500 12.58 0.00 0.00 2.83
639 655 6.187682 AGTCCATGGTAAAATCCCTACAAAG 58.812 40.000 12.58 0.00 0.00 2.77
640 656 6.011981 AGTCCATGGTAAAATCCCTACAAAGA 60.012 38.462 12.58 0.00 0.00 2.52
641 657 6.095021 GTCCATGGTAAAATCCCTACAAAGAC 59.905 42.308 12.58 0.00 0.00 3.01
642 658 6.011981 TCCATGGTAAAATCCCTACAAAGACT 60.012 38.462 12.58 0.00 0.00 3.24
643 659 6.663523 CCATGGTAAAATCCCTACAAAGACTT 59.336 38.462 2.57 0.00 0.00 3.01
644 660 7.832187 CCATGGTAAAATCCCTACAAAGACTTA 59.168 37.037 2.57 0.00 0.00 2.24
645 661 9.408648 CATGGTAAAATCCCTACAAAGACTTAT 57.591 33.333 0.00 0.00 0.00 1.73
660 676 9.892130 ACAAAGACTTATATTTAGGAACAGAGG 57.108 33.333 0.00 0.00 0.00 3.69
661 677 9.331282 CAAAGACTTATATTTAGGAACAGAGGG 57.669 37.037 0.00 0.00 0.00 4.30
662 678 8.855804 AAGACTTATATTTAGGAACAGAGGGA 57.144 34.615 0.00 0.00 0.00 4.20
663 679 8.485578 AGACTTATATTTAGGAACAGAGGGAG 57.514 38.462 0.00 0.00 0.00 4.30
789 811 1.074889 ACATTCTTACCGTGCCCCTTT 59.925 47.619 0.00 0.00 0.00 3.11
824 846 0.811281 CGTTCTTTCCATCAAGCCCC 59.189 55.000 0.00 0.00 0.00 5.80
866 889 3.303351 AACCCAGCTAGCTAATGCATT 57.697 42.857 18.86 17.56 42.74 3.56
869 892 4.137543 ACCCAGCTAGCTAATGCATTTAC 58.862 43.478 18.86 10.16 42.74 2.01
872 895 4.320057 CCAGCTAGCTAATGCATTTACAGC 60.320 45.833 18.86 19.70 42.74 4.40
880 903 2.145905 GCATTTACAGCGTGCGTGC 61.146 57.895 0.00 0.00 0.00 5.34
882 905 2.314647 ATTTACAGCGTGCGTGCGT 61.315 52.632 3.11 0.00 40.67 5.24
902 925 2.355363 GTGCGTGCGTACAGACCA 60.355 61.111 4.09 0.00 0.00 4.02
912 935 2.567985 CGTACAGACCAACCAACCTTT 58.432 47.619 0.00 0.00 0.00 3.11
917 940 0.105913 GACCAACCAACCTTTCCCCA 60.106 55.000 0.00 0.00 0.00 4.96
963 986 4.616604 GCAGTAGCACATCAATCAGCAAAA 60.617 41.667 0.00 0.00 41.58 2.44
1024 1047 4.056125 CAGCTCGTGACCTCCGCA 62.056 66.667 0.00 0.00 0.00 5.69
1172 1201 2.158841 CCAGCGCTTGTACGTGTATTTT 59.841 45.455 7.50 0.00 34.88 1.82
1174 1203 3.597825 CAGCGCTTGTACGTGTATTTTTG 59.402 43.478 7.50 0.00 34.88 2.44
1184 1213 8.951954 TGTACGTGTATTTTTGCGATTAATTT 57.048 26.923 0.00 0.00 0.00 1.82
1194 1223 6.959671 TTTGCGATTAATTTTTCCACCATC 57.040 33.333 0.00 0.00 0.00 3.51
1584 1618 2.353704 CGAGCTTCACATGGTTCACCTA 60.354 50.000 0.00 0.00 36.82 3.08
1701 1735 2.250031 TCCATCTGCTGCCAACAAATT 58.750 42.857 0.00 0.00 0.00 1.82
1748 1933 8.786898 ACGGAGTTAAAGTTTTTAACTAATCCC 58.213 33.333 20.71 17.06 43.10 3.85
1999 2439 4.546829 ACTTACGGGAAATCAGCTTACA 57.453 40.909 0.00 0.00 0.00 2.41
2010 2521 4.737855 ATCAGCTTACAGACATACGGTT 57.262 40.909 0.00 0.00 0.00 4.44
2040 2551 7.387265 TGCCCCTGATATTCTCTAACAATAA 57.613 36.000 0.00 0.00 0.00 1.40
2043 2554 7.148171 GCCCCTGATATTCTCTAACAATAATGC 60.148 40.741 0.00 0.00 0.00 3.56
2048 2559 8.090831 TGATATTCTCTAACAATAATGCGCTCT 58.909 33.333 9.73 0.00 0.00 4.09
2056 2567 5.637104 ACAATAATGCGCTCTAAAGTACG 57.363 39.130 9.73 0.00 0.00 3.67
2060 2571 0.242825 TGCGCTCTAAAGTACGTGCT 59.757 50.000 9.73 0.00 34.25 4.40
2110 2633 2.064762 CAACTGAAGCTTCTCACCGAG 58.935 52.381 26.09 16.28 0.00 4.63
2143 2666 8.849490 CATGACGTAATTAAGTTGTTCCATTTG 58.151 33.333 5.50 0.00 0.00 2.32
2177 2722 9.480053 CTTCAATCTTTATTCAAGAAGGCAAAA 57.520 29.630 0.00 0.00 45.06 2.44
2238 2783 0.601057 TTGAGATGAACGCGAGACCA 59.399 50.000 15.93 4.92 0.00 4.02
2282 2827 1.553706 ATCAGCTTTTTCTGCCCTGG 58.446 50.000 0.00 0.00 34.19 4.45
2477 3022 2.230130 TTTCCCATGCCCTTAGTTGG 57.770 50.000 0.00 0.00 0.00 3.77
2497 3046 2.143925 GTGGAAACCACGAGGAAGAAG 58.856 52.381 5.68 0.00 44.95 2.85
2498 3047 1.157585 GGAAACCACGAGGAAGAAGC 58.842 55.000 5.68 0.00 38.69 3.86
2499 3048 1.542547 GGAAACCACGAGGAAGAAGCA 60.543 52.381 5.68 0.00 38.69 3.91
2500 3049 2.427506 GAAACCACGAGGAAGAAGCAT 58.572 47.619 5.68 0.00 38.69 3.79
2501 3050 1.813513 AACCACGAGGAAGAAGCATG 58.186 50.000 5.68 0.00 38.69 4.06
2502 3051 0.976641 ACCACGAGGAAGAAGCATGA 59.023 50.000 5.68 0.00 38.69 3.07
2503 3052 1.347707 ACCACGAGGAAGAAGCATGAA 59.652 47.619 5.68 0.00 38.69 2.57
2504 3053 2.005451 CCACGAGGAAGAAGCATGAAG 58.995 52.381 0.00 0.00 36.89 3.02
2533 3083 3.834938 TCCATGGAGCATTGCAATGATA 58.165 40.909 37.36 21.19 38.70 2.15
2585 3139 4.079253 AGTCTCGGCATGGTTGTTAATTT 58.921 39.130 0.00 0.00 0.00 1.82
2673 3263 2.165641 TGTGTCCAATCTAGTACGCCAG 59.834 50.000 0.00 0.00 0.00 4.85
2682 3272 4.054780 TCTAGTACGCCAGCTTATTTGG 57.945 45.455 0.00 0.00 38.78 3.28
2684 3274 0.380733 GTACGCCAGCTTATTTGGGC 59.619 55.000 0.41 0.41 42.98 5.36
2765 3363 4.262765 CCAAGATGTGCTAGCTCATGGATA 60.263 45.833 31.14 5.91 31.36 2.59
2885 3509 6.703607 TCTTCTTCTTCAAGAAAGTGTGCTAG 59.296 38.462 0.48 0.00 46.03 3.42
2886 3510 5.918608 TCTTCTTCAAGAAAGTGTGCTAGT 58.081 37.500 0.48 0.00 35.57 2.57
2917 3567 5.646467 TTTGTTCGTCTTCCTTCTTTACG 57.354 39.130 0.00 0.00 34.99 3.18
2922 3572 2.074576 GTCTTCCTTCTTTACGGCACC 58.925 52.381 0.00 0.00 0.00 5.01
2923 3573 1.975680 TCTTCCTTCTTTACGGCACCT 59.024 47.619 0.00 0.00 0.00 4.00
2924 3574 3.056322 GTCTTCCTTCTTTACGGCACCTA 60.056 47.826 0.00 0.00 0.00 3.08
2925 3575 3.773119 TCTTCCTTCTTTACGGCACCTAT 59.227 43.478 0.00 0.00 0.00 2.57
2926 3576 4.957954 TCTTCCTTCTTTACGGCACCTATA 59.042 41.667 0.00 0.00 0.00 1.31
2927 3577 5.601313 TCTTCCTTCTTTACGGCACCTATAT 59.399 40.000 0.00 0.00 0.00 0.86
2928 3578 6.779049 TCTTCCTTCTTTACGGCACCTATATA 59.221 38.462 0.00 0.00 0.00 0.86
2929 3579 6.336842 TCCTTCTTTACGGCACCTATATAC 57.663 41.667 0.00 0.00 0.00 1.47
2930 3580 5.834742 TCCTTCTTTACGGCACCTATATACA 59.165 40.000 0.00 0.00 0.00 2.29
2932 3582 6.015688 CCTTCTTTACGGCACCTATATACAGA 60.016 42.308 0.00 0.00 0.00 3.41
2933 3583 7.309867 CCTTCTTTACGGCACCTATATACAGAT 60.310 40.741 0.00 0.00 0.00 2.90
2934 3584 6.920817 TCTTTACGGCACCTATATACAGATG 58.079 40.000 0.00 0.00 0.00 2.90
2935 3585 3.594603 ACGGCACCTATATACAGATGC 57.405 47.619 0.00 0.00 0.00 3.91
2980 3630 2.951642 AGTGCTATGCTTGTGTTGTTGT 59.048 40.909 0.00 0.00 0.00 3.32
2986 3636 3.691049 TGCTTGTGTTGTTGTCTTAGC 57.309 42.857 0.00 0.00 0.00 3.09
3037 3687 3.745975 TCGACACTTGTCATGAATTGGAC 59.254 43.478 9.94 0.00 44.99 4.02
3070 3720 1.434622 CGTCTGGAGATGTGCATGGC 61.435 60.000 0.00 0.00 0.00 4.40
3085 3735 4.579127 GGCCCGACCAATAATGCT 57.421 55.556 0.00 0.00 38.86 3.79
3086 3736 2.807247 GGCCCGACCAATAATGCTT 58.193 52.632 0.00 0.00 38.86 3.91
3095 3745 5.289595 CGACCAATAATGCTTAGCTACTGA 58.710 41.667 5.60 0.00 0.00 3.41
3121 3771 2.887568 GCGTCCATGACAGGAGCG 60.888 66.667 0.00 0.00 38.64 5.03
3148 3798 5.480422 TCCCATACATTGTACGAGATAGCAT 59.520 40.000 0.00 0.00 0.00 3.79
3149 3799 5.578336 CCCATACATTGTACGAGATAGCATG 59.422 44.000 0.00 0.00 0.00 4.06
3150 3800 5.062683 CCATACATTGTACGAGATAGCATGC 59.937 44.000 10.51 10.51 0.00 4.06
3207 4242 1.886542 CTTTTCCGGGGTCCTTTTCAG 59.113 52.381 0.00 0.00 0.00 3.02
3212 4247 1.235724 CGGGGTCCTTTTCAGTTGTC 58.764 55.000 0.00 0.00 0.00 3.18
3223 4258 3.931907 TTCAGTTGTCCCTATCCCATG 57.068 47.619 0.00 0.00 0.00 3.66
3234 4269 0.837691 TATCCCATGGGCTGCGAGAT 60.838 55.000 27.41 14.69 34.68 2.75
3243 4278 1.270518 GGGCTGCGAGATATCACATGT 60.271 52.381 5.32 0.00 0.00 3.21
3244 4279 2.064762 GGCTGCGAGATATCACATGTC 58.935 52.381 5.32 0.00 0.00 3.06
3245 4280 2.064762 GCTGCGAGATATCACATGTCC 58.935 52.381 5.32 0.00 0.00 4.02
3246 4281 2.323059 CTGCGAGATATCACATGTCCG 58.677 52.381 5.32 0.00 0.00 4.79
3247 4282 1.681264 TGCGAGATATCACATGTCCGT 59.319 47.619 5.32 0.00 0.00 4.69
3248 4283 2.054363 GCGAGATATCACATGTCCGTG 58.946 52.381 5.32 0.00 38.29 4.94
3249 4284 2.054363 CGAGATATCACATGTCCGTGC 58.946 52.381 5.32 0.00 36.80 5.34
3250 4285 2.054363 GAGATATCACATGTCCGTGCG 58.946 52.381 5.32 0.00 36.80 5.34
3251 4286 1.409064 AGATATCACATGTCCGTGCGT 59.591 47.619 5.32 0.00 36.80 5.24
3252 4287 1.787155 GATATCACATGTCCGTGCGTC 59.213 52.381 0.00 0.00 36.80 5.19
3253 4288 0.528470 TATCACATGTCCGTGCGTCA 59.472 50.000 0.00 0.00 36.80 4.35
3254 4289 0.320334 ATCACATGTCCGTGCGTCAA 60.320 50.000 0.00 0.00 36.80 3.18
3255 4290 0.943835 TCACATGTCCGTGCGTCAAG 60.944 55.000 0.00 0.00 36.80 3.02
3266 4301 4.530857 CGTCAAGCTAGGCCCCGG 62.531 72.222 0.00 0.00 0.00 5.73
3267 4302 3.081409 GTCAAGCTAGGCCCCGGA 61.081 66.667 0.73 0.00 0.00 5.14
3268 4303 2.764128 TCAAGCTAGGCCCCGGAG 60.764 66.667 0.73 0.00 0.00 4.63
3269 4304 2.764128 CAAGCTAGGCCCCGGAGA 60.764 66.667 0.73 0.00 0.00 3.71
3270 4305 2.143419 CAAGCTAGGCCCCGGAGAT 61.143 63.158 0.73 0.00 0.00 2.75
3271 4306 1.384643 AAGCTAGGCCCCGGAGATT 60.385 57.895 0.73 0.00 0.00 2.40
3272 4307 1.411651 AAGCTAGGCCCCGGAGATTC 61.412 60.000 0.73 0.00 0.00 2.52
3273 4308 1.839296 GCTAGGCCCCGGAGATTCT 60.839 63.158 0.73 0.00 0.00 2.40
3274 4309 1.822114 GCTAGGCCCCGGAGATTCTC 61.822 65.000 0.73 5.03 0.00 2.87
3275 4310 1.528292 CTAGGCCCCGGAGATTCTCG 61.528 65.000 0.73 3.55 0.00 4.04
3276 4311 2.294170 TAGGCCCCGGAGATTCTCGT 62.294 60.000 0.73 0.00 0.00 4.18
3277 4312 2.732619 GGCCCCGGAGATTCTCGTT 61.733 63.158 0.73 0.00 0.00 3.85
3278 4313 1.521681 GCCCCGGAGATTCTCGTTG 60.522 63.158 0.73 0.65 0.00 4.10
3279 4314 1.898154 CCCCGGAGATTCTCGTTGT 59.102 57.895 0.73 0.00 0.00 3.32
3280 4315 0.249398 CCCCGGAGATTCTCGTTGTT 59.751 55.000 0.73 0.00 0.00 2.83
3281 4316 1.479323 CCCCGGAGATTCTCGTTGTTA 59.521 52.381 0.73 0.00 0.00 2.41
3282 4317 2.102588 CCCCGGAGATTCTCGTTGTTAT 59.897 50.000 0.73 0.00 0.00 1.89
3283 4318 3.431766 CCCCGGAGATTCTCGTTGTTATT 60.432 47.826 0.73 0.00 0.00 1.40
3284 4319 3.802685 CCCGGAGATTCTCGTTGTTATTC 59.197 47.826 0.73 0.00 0.00 1.75
3285 4320 4.441634 CCCGGAGATTCTCGTTGTTATTCT 60.442 45.833 0.73 0.00 0.00 2.40
3286 4321 4.740695 CCGGAGATTCTCGTTGTTATTCTC 59.259 45.833 0.00 0.00 0.00 2.87
3287 4322 4.438145 CGGAGATTCTCGTTGTTATTCTCG 59.562 45.833 7.57 0.00 0.00 4.04
3288 4323 5.341617 GGAGATTCTCGTTGTTATTCTCGT 58.658 41.667 7.57 0.00 0.00 4.18
3289 4324 5.805994 GGAGATTCTCGTTGTTATTCTCGTT 59.194 40.000 7.57 0.00 0.00 3.85
3290 4325 6.237595 GGAGATTCTCGTTGTTATTCTCGTTG 60.238 42.308 7.57 0.00 0.00 4.10
3291 4326 6.157211 AGATTCTCGTTGTTATTCTCGTTGT 58.843 36.000 0.00 0.00 0.00 3.32
3292 4327 6.645415 AGATTCTCGTTGTTATTCTCGTTGTT 59.355 34.615 0.00 0.00 0.00 2.83
3293 4328 7.811236 AGATTCTCGTTGTTATTCTCGTTGTTA 59.189 33.333 0.00 0.00 0.00 2.41
3294 4329 7.878477 TTCTCGTTGTTATTCTCGTTGTTAT 57.122 32.000 0.00 0.00 0.00 1.89
3295 4330 8.969121 TTCTCGTTGTTATTCTCGTTGTTATA 57.031 30.769 0.00 0.00 0.00 0.98
3296 4331 8.385789 TCTCGTTGTTATTCTCGTTGTTATAC 57.614 34.615 0.00 0.00 0.00 1.47
3297 4332 7.196282 TCGTTGTTATTCTCGTTGTTATACG 57.804 36.000 0.00 0.00 42.68 3.06
3298 4333 6.251163 TCGTTGTTATTCTCGTTGTTATACGG 59.749 38.462 0.00 0.00 41.67 4.02
3299 4334 6.506827 CGTTGTTATTCTCGTTGTTATACGGG 60.507 42.308 0.00 0.00 43.27 5.28
3300 4335 5.964758 TGTTATTCTCGTTGTTATACGGGT 58.035 37.500 0.00 0.00 42.51 5.28
3301 4336 5.806502 TGTTATTCTCGTTGTTATACGGGTG 59.193 40.000 0.00 0.00 42.51 4.61
3302 4337 2.282701 TCTCGTTGTTATACGGGTGC 57.717 50.000 0.00 0.00 42.51 5.01
3303 4338 1.135024 TCTCGTTGTTATACGGGTGCC 60.135 52.381 0.00 0.00 42.51 5.01
3304 4339 0.896923 TCGTTGTTATACGGGTGCCT 59.103 50.000 0.00 0.00 41.67 4.75
3305 4340 2.098614 TCGTTGTTATACGGGTGCCTA 58.901 47.619 0.00 0.00 41.67 3.93
3306 4341 2.159254 TCGTTGTTATACGGGTGCCTAC 60.159 50.000 0.00 0.00 41.67 3.18
3307 4342 2.417107 CGTTGTTATACGGGTGCCTACA 60.417 50.000 0.00 0.00 37.86 2.74
3308 4343 3.738899 CGTTGTTATACGGGTGCCTACAT 60.739 47.826 0.00 0.00 37.86 2.29
3309 4344 4.193865 GTTGTTATACGGGTGCCTACATT 58.806 43.478 0.00 0.00 0.00 2.71
3310 4345 4.062677 TGTTATACGGGTGCCTACATTC 57.937 45.455 0.00 0.00 0.00 2.67
3311 4346 3.054878 GTTATACGGGTGCCTACATTCG 58.945 50.000 0.00 0.00 0.00 3.34
3312 4347 1.117150 ATACGGGTGCCTACATTCGT 58.883 50.000 0.00 0.00 39.44 3.85
3313 4348 0.457035 TACGGGTGCCTACATTCGTC 59.543 55.000 0.00 0.00 37.99 4.20
3314 4349 1.876714 CGGGTGCCTACATTCGTCG 60.877 63.158 0.00 0.00 0.00 5.12
3315 4350 1.514087 GGGTGCCTACATTCGTCGA 59.486 57.895 0.00 0.00 0.00 4.20
3316 4351 0.104304 GGGTGCCTACATTCGTCGAT 59.896 55.000 0.00 0.00 0.00 3.59
3317 4352 1.472728 GGGTGCCTACATTCGTCGATT 60.473 52.381 0.00 0.00 0.00 3.34
3318 4353 1.859080 GGTGCCTACATTCGTCGATTC 59.141 52.381 0.00 0.00 0.00 2.52
3319 4354 2.481449 GGTGCCTACATTCGTCGATTCT 60.481 50.000 0.00 0.00 0.00 2.40
3320 4355 2.535984 GTGCCTACATTCGTCGATTCTG 59.464 50.000 0.00 0.00 0.00 3.02
3321 4356 1.523095 GCCTACATTCGTCGATTCTGC 59.477 52.381 0.00 0.00 0.00 4.26
3322 4357 2.128035 CCTACATTCGTCGATTCTGCC 58.872 52.381 0.00 0.00 0.00 4.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 8.707938 TTTTGTCTAGTCATGAGATACACATG 57.292 34.615 0.00 0.00 44.20 3.21
22 23 7.984050 CCTTTTGTCTAGTCATGAGATACACAT 59.016 37.037 0.00 0.00 0.00 3.21
23 24 7.323420 CCTTTTGTCTAGTCATGAGATACACA 58.677 38.462 0.00 0.00 0.00 3.72
24 25 6.256757 GCCTTTTGTCTAGTCATGAGATACAC 59.743 42.308 0.00 0.00 0.00 2.90
25 26 6.341316 GCCTTTTGTCTAGTCATGAGATACA 58.659 40.000 0.00 0.00 0.00 2.29
26 27 5.755861 GGCCTTTTGTCTAGTCATGAGATAC 59.244 44.000 0.00 0.00 0.00 2.24
27 28 5.663106 AGGCCTTTTGTCTAGTCATGAGATA 59.337 40.000 0.00 0.00 0.00 1.98
28 29 4.472833 AGGCCTTTTGTCTAGTCATGAGAT 59.527 41.667 0.00 0.00 0.00 2.75
29 30 3.840666 AGGCCTTTTGTCTAGTCATGAGA 59.159 43.478 0.00 0.00 0.00 3.27
30 31 4.213564 AGGCCTTTTGTCTAGTCATGAG 57.786 45.455 0.00 0.00 0.00 2.90
31 32 5.425217 TGATAGGCCTTTTGTCTAGTCATGA 59.575 40.000 12.58 0.00 0.00 3.07
32 33 5.525378 GTGATAGGCCTTTTGTCTAGTCATG 59.475 44.000 12.58 0.00 0.00 3.07
33 34 5.396884 GGTGATAGGCCTTTTGTCTAGTCAT 60.397 44.000 12.58 0.00 0.00 3.06
34 35 4.081087 GGTGATAGGCCTTTTGTCTAGTCA 60.081 45.833 12.58 0.00 0.00 3.41
35 36 4.162509 AGGTGATAGGCCTTTTGTCTAGTC 59.837 45.833 12.58 0.00 31.04 2.59
36 37 4.104831 AGGTGATAGGCCTTTTGTCTAGT 58.895 43.478 12.58 0.00 31.04 2.57
37 38 4.762289 AGGTGATAGGCCTTTTGTCTAG 57.238 45.455 12.58 0.00 31.04 2.43
38 39 6.183361 GGAATAGGTGATAGGCCTTTTGTCTA 60.183 42.308 12.58 8.90 37.54 2.59
39 40 5.398012 GGAATAGGTGATAGGCCTTTTGTCT 60.398 44.000 12.58 6.71 37.54 3.41
40 41 4.822350 GGAATAGGTGATAGGCCTTTTGTC 59.178 45.833 12.58 5.33 37.54 3.18
41 42 4.229582 TGGAATAGGTGATAGGCCTTTTGT 59.770 41.667 12.58 0.00 37.54 2.83
42 43 4.792068 TGGAATAGGTGATAGGCCTTTTG 58.208 43.478 12.58 0.00 37.54 2.44
43 44 5.466127 TTGGAATAGGTGATAGGCCTTTT 57.534 39.130 12.58 0.00 37.54 2.27
44 45 5.201243 GTTTGGAATAGGTGATAGGCCTTT 58.799 41.667 12.58 1.34 37.54 3.11
45 46 4.229582 TGTTTGGAATAGGTGATAGGCCTT 59.770 41.667 12.58 0.00 37.54 4.35
46 47 3.785887 TGTTTGGAATAGGTGATAGGCCT 59.214 43.478 11.78 11.78 40.00 5.19
47 48 4.164843 TGTTTGGAATAGGTGATAGGCC 57.835 45.455 0.00 0.00 0.00 5.19
48 49 6.715347 AATTGTTTGGAATAGGTGATAGGC 57.285 37.500 0.00 0.00 0.00 3.93
52 53 8.539544 CCCTAAAAATTGTTTGGAATAGGTGAT 58.460 33.333 10.12 0.00 0.00 3.06
53 54 7.730784 TCCCTAAAAATTGTTTGGAATAGGTGA 59.269 33.333 10.12 0.00 0.00 4.02
54 55 7.902087 TCCCTAAAAATTGTTTGGAATAGGTG 58.098 34.615 10.12 0.00 0.00 4.00
55 56 8.679344 ATCCCTAAAAATTGTTTGGAATAGGT 57.321 30.769 10.12 0.00 0.00 3.08
59 60 9.430623 CGTTTATCCCTAAAAATTGTTTGGAAT 57.569 29.630 10.12 0.00 0.00 3.01
60 61 8.422566 ACGTTTATCCCTAAAAATTGTTTGGAA 58.577 29.630 10.12 0.00 0.00 3.53
61 62 7.953752 ACGTTTATCCCTAAAAATTGTTTGGA 58.046 30.769 10.12 6.16 0.00 3.53
62 63 7.868415 TGACGTTTATCCCTAAAAATTGTTTGG 59.132 33.333 2.09 2.09 0.00 3.28
63 64 8.696175 GTGACGTTTATCCCTAAAAATTGTTTG 58.304 33.333 0.00 0.00 0.00 2.93
64 65 8.414778 TGTGACGTTTATCCCTAAAAATTGTTT 58.585 29.630 0.00 0.00 0.00 2.83
65 66 7.942990 TGTGACGTTTATCCCTAAAAATTGTT 58.057 30.769 0.00 0.00 0.00 2.83
66 67 7.308951 CCTGTGACGTTTATCCCTAAAAATTGT 60.309 37.037 0.00 0.00 0.00 2.71
67 68 7.027161 CCTGTGACGTTTATCCCTAAAAATTG 58.973 38.462 0.00 0.00 0.00 2.32
68 69 6.943718 TCCTGTGACGTTTATCCCTAAAAATT 59.056 34.615 0.00 0.00 0.00 1.82
69 70 6.478129 TCCTGTGACGTTTATCCCTAAAAAT 58.522 36.000 0.00 0.00 0.00 1.82
70 71 5.867330 TCCTGTGACGTTTATCCCTAAAAA 58.133 37.500 0.00 0.00 0.00 1.94
71 72 5.486735 TCCTGTGACGTTTATCCCTAAAA 57.513 39.130 0.00 0.00 0.00 1.52
72 73 5.424252 AGATCCTGTGACGTTTATCCCTAAA 59.576 40.000 0.00 0.00 0.00 1.85
73 74 4.960469 AGATCCTGTGACGTTTATCCCTAA 59.040 41.667 0.00 0.00 0.00 2.69
74 75 4.543689 AGATCCTGTGACGTTTATCCCTA 58.456 43.478 0.00 0.00 0.00 3.53
75 76 3.375699 AGATCCTGTGACGTTTATCCCT 58.624 45.455 0.00 0.00 0.00 4.20
76 77 3.821421 AGATCCTGTGACGTTTATCCC 57.179 47.619 0.00 0.00 0.00 3.85
77 78 5.234543 GCTTAAGATCCTGTGACGTTTATCC 59.765 44.000 6.67 0.00 0.00 2.59
78 79 5.234543 GGCTTAAGATCCTGTGACGTTTATC 59.765 44.000 6.67 0.00 0.00 1.75
79 80 5.104900 AGGCTTAAGATCCTGTGACGTTTAT 60.105 40.000 6.67 0.00 0.00 1.40
80 81 4.222145 AGGCTTAAGATCCTGTGACGTTTA 59.778 41.667 6.67 0.00 0.00 2.01
81 82 3.008049 AGGCTTAAGATCCTGTGACGTTT 59.992 43.478 6.67 0.00 0.00 3.60
82 83 2.567615 AGGCTTAAGATCCTGTGACGTT 59.432 45.455 6.67 0.00 0.00 3.99
83 84 2.180276 AGGCTTAAGATCCTGTGACGT 58.820 47.619 6.67 0.00 0.00 4.34
84 85 2.969628 AGGCTTAAGATCCTGTGACG 57.030 50.000 6.67 0.00 0.00 4.35
85 86 5.799827 ATCTAGGCTTAAGATCCTGTGAC 57.200 43.478 6.67 0.00 34.02 3.67
86 87 7.952930 AGAATATCTAGGCTTAAGATCCTGTGA 59.047 37.037 6.67 7.67 35.36 3.58
87 88 8.133024 AGAATATCTAGGCTTAAGATCCTGTG 57.867 38.462 6.67 2.76 35.36 3.66
88 89 8.592809 CAAGAATATCTAGGCTTAAGATCCTGT 58.407 37.037 6.67 0.00 35.36 4.00
89 90 8.040132 CCAAGAATATCTAGGCTTAAGATCCTG 58.960 40.741 6.67 0.36 35.36 3.86
90 91 7.737149 ACCAAGAATATCTAGGCTTAAGATCCT 59.263 37.037 6.67 6.77 35.36 3.24
91 92 7.912719 ACCAAGAATATCTAGGCTTAAGATCC 58.087 38.462 6.67 0.00 35.36 3.36
98 99 9.975218 TTTTCTTTACCAAGAATATCTAGGCTT 57.025 29.630 0.00 0.00 46.36 4.35
99 100 9.397280 GTTTTCTTTACCAAGAATATCTAGGCT 57.603 33.333 0.00 0.00 46.36 4.58
100 101 9.174166 TGTTTTCTTTACCAAGAATATCTAGGC 57.826 33.333 0.00 0.00 46.36 3.93
104 105 9.588096 ACCTTGTTTTCTTTACCAAGAATATCT 57.412 29.630 0.00 0.00 46.36 1.98
107 108 9.191479 TGAACCTTGTTTTCTTTACCAAGAATA 57.809 29.630 0.00 0.00 46.36 1.75
108 109 8.073467 TGAACCTTGTTTTCTTTACCAAGAAT 57.927 30.769 0.00 0.00 46.36 2.40
109 110 7.469537 TGAACCTTGTTTTCTTTACCAAGAA 57.530 32.000 0.00 0.00 45.63 2.52
110 111 7.654022 ATGAACCTTGTTTTCTTTACCAAGA 57.346 32.000 0.00 0.00 37.14 3.02
111 112 8.630037 ACTATGAACCTTGTTTTCTTTACCAAG 58.370 33.333 0.00 0.00 35.26 3.61
112 113 8.528044 ACTATGAACCTTGTTTTCTTTACCAA 57.472 30.769 0.00 0.00 0.00 3.67
113 114 8.410141 CAACTATGAACCTTGTTTTCTTTACCA 58.590 33.333 0.00 0.00 0.00 3.25
114 115 8.626526 TCAACTATGAACCTTGTTTTCTTTACC 58.373 33.333 0.00 0.00 30.99 2.85
165 166 7.506971 ACCATTAAGTTTGACCTAGCCTATAC 58.493 38.462 0.00 0.00 0.00 1.47
233 236 9.540538 TCTTTCCTTTTATCCCATAATGTTTCA 57.459 29.630 0.00 0.00 0.00 2.69
237 240 8.758829 GGTTTCTTTCCTTTTATCCCATAATGT 58.241 33.333 0.00 0.00 0.00 2.71
238 241 8.757877 TGGTTTCTTTCCTTTTATCCCATAATG 58.242 33.333 0.00 0.00 0.00 1.90
239 242 8.909423 TGGTTTCTTTCCTTTTATCCCATAAT 57.091 30.769 0.00 0.00 0.00 1.28
240 243 8.728596 TTGGTTTCTTTCCTTTTATCCCATAA 57.271 30.769 0.00 0.00 0.00 1.90
241 244 8.728596 TTTGGTTTCTTTCCTTTTATCCCATA 57.271 30.769 0.00 0.00 0.00 2.74
242 245 7.625498 TTTGGTTTCTTTCCTTTTATCCCAT 57.375 32.000 0.00 0.00 0.00 4.00
243 246 7.449247 CATTTGGTTTCTTTCCTTTTATCCCA 58.551 34.615 0.00 0.00 0.00 4.37
244 247 6.878923 CCATTTGGTTTCTTTCCTTTTATCCC 59.121 38.462 0.00 0.00 0.00 3.85
245 248 7.905604 CCATTTGGTTTCTTTCCTTTTATCC 57.094 36.000 0.00 0.00 0.00 2.59
328 341 2.227388 CTGAAACTAGCAAAGCCACCTG 59.773 50.000 0.00 0.00 0.00 4.00
329 342 2.106511 TCTGAAACTAGCAAAGCCACCT 59.893 45.455 0.00 0.00 0.00 4.00
349 362 5.230306 CACGAATGACGAATCTACTTCCTTC 59.770 44.000 0.00 0.00 45.77 3.46
352 365 3.243177 GCACGAATGACGAATCTACTTCC 59.757 47.826 0.00 0.00 45.77 3.46
357 370 3.551485 CACATGCACGAATGACGAATCTA 59.449 43.478 0.00 0.00 45.77 1.98
358 371 2.349580 CACATGCACGAATGACGAATCT 59.650 45.455 0.00 0.00 45.77 2.40
359 372 2.094258 ACACATGCACGAATGACGAATC 59.906 45.455 0.00 0.00 45.77 2.52
360 373 2.076100 ACACATGCACGAATGACGAAT 58.924 42.857 0.00 0.00 45.77 3.34
361 374 1.507562 ACACATGCACGAATGACGAA 58.492 45.000 0.00 0.00 45.77 3.85
364 377 1.535028 TCCAACACATGCACGAATGAC 59.465 47.619 0.00 0.00 0.00 3.06
365 378 1.805943 CTCCAACACATGCACGAATGA 59.194 47.619 0.00 0.00 0.00 2.57
366 379 1.730121 GCTCCAACACATGCACGAATG 60.730 52.381 0.00 0.00 0.00 2.67
367 380 0.523072 GCTCCAACACATGCACGAAT 59.477 50.000 0.00 0.00 0.00 3.34
368 381 0.534877 AGCTCCAACACATGCACGAA 60.535 50.000 0.00 0.00 0.00 3.85
369 382 0.950555 GAGCTCCAACACATGCACGA 60.951 55.000 0.87 0.00 0.00 4.35
370 383 1.229975 TGAGCTCCAACACATGCACG 61.230 55.000 12.15 0.00 0.00 5.34
371 384 1.131883 GATGAGCTCCAACACATGCAC 59.868 52.381 12.15 0.00 0.00 4.57
372 385 1.271488 TGATGAGCTCCAACACATGCA 60.271 47.619 12.15 0.00 0.00 3.96
373 386 1.456296 TGATGAGCTCCAACACATGC 58.544 50.000 12.15 0.00 0.00 4.06
374 387 3.275999 TGATGATGAGCTCCAACACATG 58.724 45.455 12.15 0.00 30.09 3.21
375 388 3.639672 TGATGATGAGCTCCAACACAT 57.360 42.857 12.15 9.26 30.09 3.21
376 389 3.076621 GTTGATGATGAGCTCCAACACA 58.923 45.455 20.97 10.57 37.59 3.72
377 390 3.076621 TGTTGATGATGAGCTCCAACAC 58.923 45.455 23.31 9.82 41.17 3.32
381 394 3.805207 CTCATGTTGATGATGAGCTCCA 58.195 45.455 12.15 2.80 40.23 3.86
418 431 4.244425 TCTCGAGATATGGTGCTTTAGC 57.756 45.455 12.08 0.00 42.50 3.09
419 432 5.463724 GGTTTCTCGAGATATGGTGCTTTAG 59.536 44.000 17.44 0.00 0.00 1.85
421 434 4.080863 AGGTTTCTCGAGATATGGTGCTTT 60.081 41.667 17.44 0.00 0.00 3.51
422 435 3.452627 AGGTTTCTCGAGATATGGTGCTT 59.547 43.478 17.44 0.00 0.00 3.91
423 436 3.034635 AGGTTTCTCGAGATATGGTGCT 58.965 45.455 17.44 0.00 0.00 4.40
424 437 3.460857 AGGTTTCTCGAGATATGGTGC 57.539 47.619 17.44 0.00 0.00 5.01
425 438 7.887381 ACTATAAGGTTTCTCGAGATATGGTG 58.113 38.462 17.44 8.04 0.00 4.17
426 439 7.724506 TGACTATAAGGTTTCTCGAGATATGGT 59.275 37.037 17.44 17.18 0.00 3.55
427 440 8.112016 TGACTATAAGGTTTCTCGAGATATGG 57.888 38.462 17.44 14.22 0.00 2.74
445 458 7.648112 GTCTCTATGCAACGTCAATTGACTATA 59.352 37.037 30.45 19.61 42.66 1.31
484 500 6.319152 GGAGTAGTTAGTGTGCTCATTAGAGA 59.681 42.308 0.00 0.00 44.98 3.10
503 519 7.450944 ACTTATATTTAGGAACGGAGGGAGTAG 59.549 40.741 0.00 0.00 0.00 2.57
504 520 7.300658 ACTTATATTTAGGAACGGAGGGAGTA 58.699 38.462 0.00 0.00 0.00 2.59
505 521 6.141790 ACTTATATTTAGGAACGGAGGGAGT 58.858 40.000 0.00 0.00 0.00 3.85
506 522 6.494146 AGACTTATATTTAGGAACGGAGGGAG 59.506 42.308 0.00 0.00 0.00 4.30
507 523 6.379579 AGACTTATATTTAGGAACGGAGGGA 58.620 40.000 0.00 0.00 0.00 4.20
508 524 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
509 525 7.985752 ACAAAGACTTATATTTAGGAACGGAGG 59.014 37.037 0.00 0.00 0.00 4.30
510 526 8.943909 ACAAAGACTTATATTTAGGAACGGAG 57.056 34.615 0.00 0.00 0.00 4.63
529 545 9.958180 TGGTTCATAATGAAATCTCTACAAAGA 57.042 29.630 0.00 0.00 38.22 2.52
530 546 9.994432 GTGGTTCATAATGAAATCTCTACAAAG 57.006 33.333 0.00 0.00 38.22 2.77
531 547 9.513906 TGTGGTTCATAATGAAATCTCTACAAA 57.486 29.630 0.00 0.00 38.22 2.83
532 548 9.685276 ATGTGGTTCATAATGAAATCTCTACAA 57.315 29.630 0.00 0.00 38.22 2.41
535 551 9.476202 CGTATGTGGTTCATAATGAAATCTCTA 57.524 33.333 0.00 0.00 38.22 2.43
536 552 7.442364 CCGTATGTGGTTCATAATGAAATCTCT 59.558 37.037 0.00 0.00 38.22 3.10
537 553 7.441157 TCCGTATGTGGTTCATAATGAAATCTC 59.559 37.037 0.00 0.00 38.22 2.75
538 554 7.279615 TCCGTATGTGGTTCATAATGAAATCT 58.720 34.615 0.00 0.00 38.22 2.40
539 555 7.490962 TCCGTATGTGGTTCATAATGAAATC 57.509 36.000 0.00 0.00 38.22 2.17
540 556 7.502226 ACATCCGTATGTGGTTCATAATGAAAT 59.498 33.333 0.00 0.00 44.79 2.17
541 557 6.826231 ACATCCGTATGTGGTTCATAATGAAA 59.174 34.615 0.00 0.00 44.79 2.69
542 558 6.353323 ACATCCGTATGTGGTTCATAATGAA 58.647 36.000 0.00 0.00 44.79 2.57
543 559 5.924356 ACATCCGTATGTGGTTCATAATGA 58.076 37.500 0.00 0.00 44.79 2.57
544 560 7.905604 ATACATCCGTATGTGGTTCATAATG 57.094 36.000 3.56 0.00 45.99 1.90
547 563 9.689501 TCTATATACATCCGTATGTGGTTCATA 57.310 33.333 3.56 0.00 45.99 2.15
548 564 8.589701 TCTATATACATCCGTATGTGGTTCAT 57.410 34.615 3.56 0.00 45.99 2.57
549 565 8.466798 CATCTATATACATCCGTATGTGGTTCA 58.533 37.037 3.56 0.00 45.99 3.18
550 566 7.435488 GCATCTATATACATCCGTATGTGGTTC 59.565 40.741 3.56 0.00 45.99 3.62
551 567 7.093509 TGCATCTATATACATCCGTATGTGGTT 60.094 37.037 3.56 0.00 45.99 3.67
552 568 6.379988 TGCATCTATATACATCCGTATGTGGT 59.620 38.462 3.56 0.00 45.99 4.16
553 569 6.805713 TGCATCTATATACATCCGTATGTGG 58.194 40.000 3.56 0.00 45.99 4.17
554 570 8.877808 AATGCATCTATATACATCCGTATGTG 57.122 34.615 3.56 0.00 45.99 3.21
559 575 9.809096 CTCTAAAATGCATCTATATACATCCGT 57.191 33.333 0.00 0.00 0.00 4.69
560 576 9.809096 ACTCTAAAATGCATCTATATACATCCG 57.191 33.333 0.00 0.00 0.00 4.18
571 587 9.624373 AATGAATCTACACTCTAAAATGCATCT 57.376 29.630 0.00 0.00 0.00 2.90
572 588 9.875675 GAATGAATCTACACTCTAAAATGCATC 57.124 33.333 0.00 0.00 0.00 3.91
573 589 9.399797 TGAATGAATCTACACTCTAAAATGCAT 57.600 29.630 0.00 0.00 0.00 3.96
574 590 8.791327 TGAATGAATCTACACTCTAAAATGCA 57.209 30.769 0.00 0.00 0.00 3.96
580 596 9.453572 AGCAAAATGAATGAATCTACACTCTAA 57.546 29.630 0.00 0.00 0.00 2.10
581 597 9.102757 GAGCAAAATGAATGAATCTACACTCTA 57.897 33.333 0.00 0.00 0.00 2.43
582 598 7.066766 GGAGCAAAATGAATGAATCTACACTCT 59.933 37.037 0.00 0.00 0.00 3.24
583 599 7.192232 GGAGCAAAATGAATGAATCTACACTC 58.808 38.462 0.00 0.00 0.00 3.51
584 600 6.183360 CGGAGCAAAATGAATGAATCTACACT 60.183 38.462 0.00 0.00 0.00 3.55
585 601 5.967674 CGGAGCAAAATGAATGAATCTACAC 59.032 40.000 0.00 0.00 0.00 2.90
586 602 5.647658 ACGGAGCAAAATGAATGAATCTACA 59.352 36.000 0.00 0.00 0.00 2.74
587 603 6.124088 ACGGAGCAAAATGAATGAATCTAC 57.876 37.500 0.00 0.00 0.00 2.59
588 604 7.498900 ACATACGGAGCAAAATGAATGAATCTA 59.501 33.333 0.00 0.00 0.00 1.98
589 605 6.319658 ACATACGGAGCAAAATGAATGAATCT 59.680 34.615 0.00 0.00 0.00 2.40
590 606 6.498304 ACATACGGAGCAAAATGAATGAATC 58.502 36.000 0.00 0.00 0.00 2.52
591 607 6.455360 ACATACGGAGCAAAATGAATGAAT 57.545 33.333 0.00 0.00 0.00 2.57
592 608 5.895636 ACATACGGAGCAAAATGAATGAA 57.104 34.783 0.00 0.00 0.00 2.57
593 609 6.112734 ACTACATACGGAGCAAAATGAATGA 58.887 36.000 0.00 0.00 0.00 2.57
594 610 6.363577 ACTACATACGGAGCAAAATGAATG 57.636 37.500 0.00 0.00 0.00 2.67
595 611 5.527582 GGACTACATACGGAGCAAAATGAAT 59.472 40.000 0.00 0.00 0.00 2.57
596 612 4.873827 GGACTACATACGGAGCAAAATGAA 59.126 41.667 0.00 0.00 0.00 2.57
597 613 4.081365 TGGACTACATACGGAGCAAAATGA 60.081 41.667 0.00 0.00 0.00 2.57
598 614 4.188462 TGGACTACATACGGAGCAAAATG 58.812 43.478 0.00 0.00 0.00 2.32
599 615 4.481368 TGGACTACATACGGAGCAAAAT 57.519 40.909 0.00 0.00 0.00 1.82
600 616 3.965379 TGGACTACATACGGAGCAAAA 57.035 42.857 0.00 0.00 0.00 2.44
601 617 3.431626 CCATGGACTACATACGGAGCAAA 60.432 47.826 5.56 0.00 37.84 3.68
602 618 2.102420 CCATGGACTACATACGGAGCAA 59.898 50.000 5.56 0.00 37.84 3.91
603 619 1.686587 CCATGGACTACATACGGAGCA 59.313 52.381 5.56 0.00 37.84 4.26
604 620 1.687123 ACCATGGACTACATACGGAGC 59.313 52.381 21.47 0.00 37.84 4.70
605 621 5.524971 TTTACCATGGACTACATACGGAG 57.475 43.478 21.47 0.00 37.84 4.63
606 622 5.936187 TTTTACCATGGACTACATACGGA 57.064 39.130 21.47 0.00 37.84 4.69
607 623 5.699458 GGATTTTACCATGGACTACATACGG 59.301 44.000 21.47 0.00 37.84 4.02
608 624 5.699458 GGGATTTTACCATGGACTACATACG 59.301 44.000 21.47 0.00 37.84 3.06
609 625 6.838382 AGGGATTTTACCATGGACTACATAC 58.162 40.000 21.47 4.12 37.84 2.39
610 626 7.569485 TGTAGGGATTTTACCATGGACTACATA 59.431 37.037 21.47 0.00 37.84 2.29
611 627 5.994416 AGGGATTTTACCATGGACTACAT 57.006 39.130 21.47 3.22 41.57 2.29
612 628 5.727279 TGTAGGGATTTTACCATGGACTACA 59.273 40.000 21.47 17.48 36.79 2.74
613 629 6.243216 TGTAGGGATTTTACCATGGACTAC 57.757 41.667 21.47 15.46 0.00 2.73
614 630 6.894735 TTGTAGGGATTTTACCATGGACTA 57.105 37.500 21.47 0.00 0.00 2.59
615 631 5.789574 TTGTAGGGATTTTACCATGGACT 57.210 39.130 21.47 0.00 0.00 3.85
616 632 6.095021 GTCTTTGTAGGGATTTTACCATGGAC 59.905 42.308 21.47 1.95 0.00 4.02
617 633 6.011981 AGTCTTTGTAGGGATTTTACCATGGA 60.012 38.462 21.47 0.00 0.00 3.41
618 634 6.187682 AGTCTTTGTAGGGATTTTACCATGG 58.812 40.000 11.19 11.19 0.00 3.66
619 635 7.703058 AAGTCTTTGTAGGGATTTTACCATG 57.297 36.000 0.00 0.00 0.00 3.66
634 650 9.892130 CCTCTGTTCCTAAATATAAGTCTTTGT 57.108 33.333 0.00 0.00 0.00 2.83
635 651 9.331282 CCCTCTGTTCCTAAATATAAGTCTTTG 57.669 37.037 0.00 0.00 0.00 2.77
636 652 9.280456 TCCCTCTGTTCCTAAATATAAGTCTTT 57.720 33.333 0.00 0.00 0.00 2.52
637 653 8.855804 TCCCTCTGTTCCTAAATATAAGTCTT 57.144 34.615 0.00 0.00 0.00 3.01
638 654 8.068733 ACTCCCTCTGTTCCTAAATATAAGTCT 58.931 37.037 0.00 0.00 0.00 3.24
639 655 8.252624 ACTCCCTCTGTTCCTAAATATAAGTC 57.747 38.462 0.00 0.00 0.00 3.01
640 656 9.369672 CTACTCCCTCTGTTCCTAAATATAAGT 57.630 37.037 0.00 0.00 0.00 2.24
641 657 9.369672 ACTACTCCCTCTGTTCCTAAATATAAG 57.630 37.037 0.00 0.00 0.00 1.73
642 658 9.725206 AACTACTCCCTCTGTTCCTAAATATAA 57.275 33.333 0.00 0.00 0.00 0.98
643 659 9.364653 GAACTACTCCCTCTGTTCCTAAATATA 57.635 37.037 0.00 0.00 34.47 0.86
644 660 8.068733 AGAACTACTCCCTCTGTTCCTAAATAT 58.931 37.037 0.00 0.00 39.45 1.28
645 661 7.420029 AGAACTACTCCCTCTGTTCCTAAATA 58.580 38.462 0.00 0.00 39.45 1.40
646 662 6.265304 AGAACTACTCCCTCTGTTCCTAAAT 58.735 40.000 0.00 0.00 39.45 1.40
647 663 5.652324 AGAACTACTCCCTCTGTTCCTAAA 58.348 41.667 0.00 0.00 39.45 1.85
648 664 5.272405 AGAACTACTCCCTCTGTTCCTAA 57.728 43.478 0.00 0.00 39.45 2.69
649 665 4.949966 AGAACTACTCCCTCTGTTCCTA 57.050 45.455 0.00 0.00 39.45 2.94
650 666 3.837399 AGAACTACTCCCTCTGTTCCT 57.163 47.619 0.00 0.00 39.45 3.36
651 667 4.160065 GGTAAGAACTACTCCCTCTGTTCC 59.840 50.000 0.00 0.00 39.45 3.62
652 668 4.142425 CGGTAAGAACTACTCCCTCTGTTC 60.142 50.000 0.00 0.00 39.06 3.18
653 669 3.762823 CGGTAAGAACTACTCCCTCTGTT 59.237 47.826 0.00 0.00 0.00 3.16
654 670 3.245193 ACGGTAAGAACTACTCCCTCTGT 60.245 47.826 0.00 0.00 0.00 3.41
655 671 3.128938 CACGGTAAGAACTACTCCCTCTG 59.871 52.174 0.00 0.00 0.00 3.35
656 672 3.009916 TCACGGTAAGAACTACTCCCTCT 59.990 47.826 0.00 0.00 0.00 3.69
657 673 3.350833 TCACGGTAAGAACTACTCCCTC 58.649 50.000 0.00 0.00 0.00 4.30
658 674 3.446442 TCACGGTAAGAACTACTCCCT 57.554 47.619 0.00 0.00 0.00 4.20
659 675 3.446516 ACATCACGGTAAGAACTACTCCC 59.553 47.826 0.00 0.00 0.00 4.30
660 676 4.715527 ACATCACGGTAAGAACTACTCC 57.284 45.455 0.00 0.00 0.00 3.85
661 677 7.081526 TCTAACATCACGGTAAGAACTACTC 57.918 40.000 0.00 0.00 0.00 2.59
662 678 6.404513 GCTCTAACATCACGGTAAGAACTACT 60.405 42.308 0.00 0.00 0.00 2.57
663 679 5.742926 GCTCTAACATCACGGTAAGAACTAC 59.257 44.000 0.00 0.00 0.00 2.73
768 790 0.696501 AGGGGCACGGTAAGAATGTT 59.303 50.000 0.00 0.00 0.00 2.71
789 811 8.145767 TGGAAAGAACGAGTCATAGAACTAAAA 58.854 33.333 0.00 0.00 0.00 1.52
794 816 6.100004 TGATGGAAAGAACGAGTCATAGAAC 58.900 40.000 0.00 0.00 0.00 3.01
805 827 0.811281 GGGGCTTGATGGAAAGAACG 59.189 55.000 0.00 0.00 0.00 3.95
824 846 2.284847 AAAAGGGGGCATGCTGGG 60.285 61.111 18.92 0.00 0.00 4.45
866 889 3.697444 CACGCACGCACGCTGTAA 61.697 61.111 0.00 0.00 36.19 2.41
882 905 4.632458 TCTGTACGCACGCACGCA 62.632 61.111 0.00 0.00 36.19 5.24
884 907 3.467119 GGTCTGTACGCACGCACG 61.467 66.667 0.00 0.00 39.50 5.34
888 911 0.876777 TTGGTTGGTCTGTACGCACG 60.877 55.000 0.00 0.00 0.00 5.34
891 914 0.250166 AGGTTGGTTGGTCTGTACGC 60.250 55.000 0.00 0.00 0.00 4.42
892 915 2.249844 AAGGTTGGTTGGTCTGTACG 57.750 50.000 0.00 0.00 0.00 3.67
893 916 2.882761 GGAAAGGTTGGTTGGTCTGTAC 59.117 50.000 0.00 0.00 0.00 2.90
902 925 1.221781 TGGAATGGGGAAAGGTTGGTT 59.778 47.619 0.00 0.00 0.00 3.67
912 935 1.719063 GCTGGGCTATGGAATGGGGA 61.719 60.000 0.00 0.00 0.00 4.81
934 957 6.220726 TGATTGATGTGCTACTGCTAGTTA 57.779 37.500 0.00 0.00 40.48 2.24
935 958 5.089970 TGATTGATGTGCTACTGCTAGTT 57.910 39.130 0.00 0.00 40.48 2.24
936 959 4.691175 CTGATTGATGTGCTACTGCTAGT 58.309 43.478 0.00 0.00 40.48 2.57
937 960 3.493877 GCTGATTGATGTGCTACTGCTAG 59.506 47.826 0.00 0.00 40.48 3.42
938 961 3.118665 TGCTGATTGATGTGCTACTGCTA 60.119 43.478 0.00 0.00 40.48 3.49
953 976 1.535462 CCGGACGTTCTTTTGCTGATT 59.465 47.619 0.00 0.00 0.00 2.57
963 986 4.681978 GTGCCTGCCGGACGTTCT 62.682 66.667 5.05 0.00 0.00 3.01
1077 1100 0.251474 TTTCATGCTGGGCTCTTGCT 60.251 50.000 4.00 0.00 39.59 3.91
1172 1201 6.030548 TGATGGTGGAAAAATTAATCGCAA 57.969 33.333 0.00 0.00 0.00 4.85
1174 1203 7.538303 AATTGATGGTGGAAAAATTAATCGC 57.462 32.000 0.00 0.00 0.00 4.58
1206 1235 5.987953 GTCTGCATGCAAGAGATATACTTGA 59.012 40.000 22.88 7.58 44.92 3.02
1323 1357 3.445518 GATGGGCGACTGCATCCGA 62.446 63.158 11.38 0.00 45.35 4.55
1467 1501 0.758734 CGTTGATCCATAGGCTCCCA 59.241 55.000 0.00 0.00 0.00 4.37
1476 1510 2.824041 GCGGTGCCGTTGATCCAT 60.824 61.111 12.46 0.00 42.09 3.41
1584 1618 0.946221 CAGTCTTGTTCTCGGCGCTT 60.946 55.000 7.64 0.00 0.00 4.68
1701 1735 7.775397 CCGTTCCGGTTAAAGAAAGATATAA 57.225 36.000 0.00 0.00 42.73 0.98
1738 1914 3.609853 CAGCTGCACAAGGGATTAGTTA 58.390 45.455 0.00 0.00 0.00 2.24
1748 1933 2.072298 GTAAGACTCCAGCTGCACAAG 58.928 52.381 8.66 5.18 0.00 3.16
1825 2011 3.106859 ATCTCCCCTCGCCTCCCAT 62.107 63.158 0.00 0.00 0.00 4.00
1944 2138 7.173722 TGGGTTCTAAATATGGTCGGTAAAAA 58.826 34.615 0.00 0.00 0.00 1.94
1999 2439 2.482490 GGGCATTCGTAACCGTATGTCT 60.482 50.000 6.34 0.00 43.39 3.41
2010 2521 4.160329 AGAGAATATCAGGGGCATTCGTA 58.840 43.478 0.00 0.00 34.55 3.43
2013 2524 5.869579 TGTTAGAGAATATCAGGGGCATTC 58.130 41.667 0.00 0.00 0.00 2.67
2040 2551 1.135083 AGCACGTACTTTAGAGCGCAT 60.135 47.619 11.47 0.00 0.00 4.73
2043 2554 4.141680 CAAAAAGCACGTACTTTAGAGCG 58.858 43.478 14.00 0.00 38.92 5.03
2074 2597 0.741221 GTTGGTGAGCCGAGATGGTC 60.741 60.000 0.00 0.00 41.21 4.02
2078 2601 0.976641 TTCAGTTGGTGAGCCGAGAT 59.023 50.000 0.00 0.00 36.21 2.75
2084 2607 1.803555 GAGAAGCTTCAGTTGGTGAGC 59.196 52.381 27.57 0.00 36.21 4.26
2162 2707 9.841295 AAATATATGCATTTTGCCTTCTTGAAT 57.159 25.926 3.54 0.00 44.23 2.57
2171 2716 9.866936 CAAACATACAAATATATGCATTTTGCC 57.133 29.630 18.07 0.00 44.23 4.52
2195 2740 4.285003 AGCCCTACACACAGTACAATACAA 59.715 41.667 0.00 0.00 0.00 2.41
2196 2741 3.835978 AGCCCTACACACAGTACAATACA 59.164 43.478 0.00 0.00 0.00 2.29
2197 2742 4.467198 AGCCCTACACACAGTACAATAC 57.533 45.455 0.00 0.00 0.00 1.89
2198 2743 5.012251 TCAAAGCCCTACACACAGTACAATA 59.988 40.000 0.00 0.00 0.00 1.90
2199 2744 4.072131 CAAAGCCCTACACACAGTACAAT 58.928 43.478 0.00 0.00 0.00 2.71
2238 2783 2.698797 TCTTCCGTTCACCTTCTGAAGT 59.301 45.455 15.72 2.19 39.69 3.01
2282 2827 2.160822 ATAGCGCTCATGGTGATCAC 57.839 50.000 16.34 17.91 0.00 3.06
2340 2885 2.766263 TGATGTCTATCCCTCACGCTTT 59.234 45.455 0.00 0.00 32.09 3.51
2490 3039 4.650754 ATCAATGCTTCATGCTTCTTCC 57.349 40.909 0.00 0.00 43.37 3.46
2497 3046 3.069016 TCCATGGAATCAATGCTTCATGC 59.931 43.478 13.46 0.00 43.25 4.06
2498 3047 4.796290 GCTCCATGGAATCAATGCTTCATG 60.796 45.833 17.00 0.00 0.00 3.07
2499 3048 3.321111 GCTCCATGGAATCAATGCTTCAT 59.679 43.478 17.00 0.00 0.00 2.57
2500 3049 2.691526 GCTCCATGGAATCAATGCTTCA 59.308 45.455 17.00 0.00 0.00 3.02
2501 3050 2.691526 TGCTCCATGGAATCAATGCTTC 59.308 45.455 17.00 0.00 0.00 3.86
2502 3051 2.742348 TGCTCCATGGAATCAATGCTT 58.258 42.857 17.00 0.00 0.00 3.91
2503 3052 2.447408 TGCTCCATGGAATCAATGCT 57.553 45.000 17.00 0.00 0.00 3.79
2504 3053 3.390135 CAATGCTCCATGGAATCAATGC 58.610 45.455 17.00 14.78 0.00 3.56
2533 3083 1.301244 CGCTTGGTGCAGAGTCACT 60.301 57.895 0.00 0.00 43.06 3.41
2555 3105 2.093973 ACCATGCCGAGACTAAGAACAG 60.094 50.000 0.00 0.00 0.00 3.16
2561 3111 2.851263 AACAACCATGCCGAGACTAA 57.149 45.000 0.00 0.00 0.00 2.24
2585 3139 6.019075 CGTCTGTGACTTTGACTTTACAATGA 60.019 38.462 0.00 0.00 0.00 2.57
2673 3263 6.367149 CAGAAAGAAAGAAAGCCCAAATAAGC 59.633 38.462 0.00 0.00 0.00 3.09
2682 3272 6.099341 TGTTGAAACAGAAAGAAAGAAAGCC 58.901 36.000 0.00 0.00 34.30 4.35
2739 3337 2.977914 TGAGCTAGCACATCTTGGAAC 58.022 47.619 18.83 0.00 0.00 3.62
2741 3339 2.158856 CCATGAGCTAGCACATCTTGGA 60.159 50.000 22.74 0.00 39.45 3.53
2765 3363 8.092068 TCTGATGTGCAATGATTGAAGAAAAAT 58.908 29.630 9.76 0.00 0.00 1.82
2885 3509 8.649973 AAGGAAGACGAACAAATATAGATCAC 57.350 34.615 0.00 0.00 0.00 3.06
2886 3510 8.696374 AGAAGGAAGACGAACAAATATAGATCA 58.304 33.333 0.00 0.00 0.00 2.92
2922 3572 2.926200 GCGTGCTGGCATCTGTATATAG 59.074 50.000 0.00 0.00 0.00 1.31
2923 3573 2.353704 GGCGTGCTGGCATCTGTATATA 60.354 50.000 0.00 0.00 44.08 0.86
2924 3574 1.609061 GGCGTGCTGGCATCTGTATAT 60.609 52.381 0.00 0.00 44.08 0.86
2925 3575 0.249868 GGCGTGCTGGCATCTGTATA 60.250 55.000 0.00 0.00 44.08 1.47
2926 3576 1.524621 GGCGTGCTGGCATCTGTAT 60.525 57.895 0.00 0.00 44.08 2.29
2927 3577 2.125147 GGCGTGCTGGCATCTGTA 60.125 61.111 0.00 0.00 44.08 2.74
2935 3585 3.052082 CTCAACTGGGCGTGCTGG 61.052 66.667 0.00 0.00 0.00 4.85
2936 3586 2.281070 ACTCAACTGGGCGTGCTG 60.281 61.111 0.00 0.00 0.00 4.41
2980 3630 6.885918 TGAGGAAAATGTGAATGATGCTAAGA 59.114 34.615 0.00 0.00 0.00 2.10
3037 3687 0.317269 CAGACGTGCAAACTGCTTGG 60.317 55.000 0.00 0.00 45.31 3.61
3070 3720 2.851195 AGCTAAGCATTATTGGTCGGG 58.149 47.619 0.00 0.00 31.86 5.14
3085 3735 2.416027 CGCTCTGCAGTTCAGTAGCTAA 60.416 50.000 14.67 0.00 43.32 3.09
3086 3736 1.133216 CGCTCTGCAGTTCAGTAGCTA 59.867 52.381 14.67 0.00 43.32 3.32
3095 3745 0.671781 GTCATGGACGCTCTGCAGTT 60.672 55.000 14.67 0.00 0.00 3.16
3104 3754 2.887568 CGCTCCTGTCATGGACGC 60.888 66.667 0.00 0.00 34.95 5.19
3121 3771 4.913335 TCTCGTACAATGTATGGGAGAC 57.087 45.455 10.92 0.00 32.52 3.36
3131 3781 4.301628 TCTGCATGCTATCTCGTACAATG 58.698 43.478 20.33 0.00 0.00 2.82
3132 3782 4.590850 TCTGCATGCTATCTCGTACAAT 57.409 40.909 20.33 0.00 0.00 2.71
3133 3783 4.301628 CATCTGCATGCTATCTCGTACAA 58.698 43.478 20.33 0.00 0.00 2.41
3223 4258 1.270518 ACATGTGATATCTCGCAGCCC 60.271 52.381 0.00 0.00 44.65 5.19
3234 4269 0.528470 TGACGCACGGACATGTGATA 59.472 50.000 1.15 0.00 42.55 2.15
3243 4278 2.571757 CCTAGCTTGACGCACGGA 59.428 61.111 0.00 0.00 42.61 4.69
3244 4279 3.188786 GCCTAGCTTGACGCACGG 61.189 66.667 0.00 0.00 42.61 4.94
3245 4280 3.188786 GGCCTAGCTTGACGCACG 61.189 66.667 0.00 0.00 42.61 5.34
3246 4281 2.820037 GGGCCTAGCTTGACGCAC 60.820 66.667 0.84 0.00 42.61 5.34
3247 4282 4.096003 GGGGCCTAGCTTGACGCA 62.096 66.667 0.84 0.00 42.61 5.24
3249 4284 4.530857 CCGGGGCCTAGCTTGACG 62.531 72.222 0.84 0.00 0.00 4.35
3250 4285 3.081409 TCCGGGGCCTAGCTTGAC 61.081 66.667 0.84 0.00 0.00 3.18
3251 4286 2.605535 ATCTCCGGGGCCTAGCTTGA 62.606 60.000 0.84 0.00 0.00 3.02
3252 4287 1.700042 AATCTCCGGGGCCTAGCTTG 61.700 60.000 0.84 0.00 0.00 4.01
3253 4288 1.384643 AATCTCCGGGGCCTAGCTT 60.385 57.895 0.84 0.00 0.00 3.74
3254 4289 1.839296 GAATCTCCGGGGCCTAGCT 60.839 63.158 0.84 0.00 0.00 3.32
3255 4290 1.822114 GAGAATCTCCGGGGCCTAGC 61.822 65.000 0.84 0.00 0.00 3.42
3256 4291 1.528292 CGAGAATCTCCGGGGCCTAG 61.528 65.000 0.84 0.00 0.00 3.02
3257 4292 1.530891 CGAGAATCTCCGGGGCCTA 60.531 63.158 0.84 0.00 0.00 3.93
3258 4293 2.840102 CGAGAATCTCCGGGGCCT 60.840 66.667 0.84 0.00 0.00 5.19
3259 4294 2.732619 AACGAGAATCTCCGGGGCC 61.733 63.158 0.00 0.00 0.00 5.80
3260 4295 1.521681 CAACGAGAATCTCCGGGGC 60.522 63.158 0.00 0.00 0.00 5.80
3261 4296 0.249398 AACAACGAGAATCTCCGGGG 59.751 55.000 0.00 0.00 0.00 5.73
3262 4297 2.953466 TAACAACGAGAATCTCCGGG 57.047 50.000 0.00 0.00 0.00 5.73
3263 4298 4.683832 AGAATAACAACGAGAATCTCCGG 58.316 43.478 4.47 0.00 0.00 5.14
3264 4299 4.438145 CGAGAATAACAACGAGAATCTCCG 59.562 45.833 4.47 2.86 0.00 4.63
3265 4300 5.341617 ACGAGAATAACAACGAGAATCTCC 58.658 41.667 4.47 0.00 0.00 3.71
3266 4301 6.308282 ACAACGAGAATAACAACGAGAATCTC 59.692 38.462 0.00 0.00 0.00 2.75
3267 4302 6.157211 ACAACGAGAATAACAACGAGAATCT 58.843 36.000 0.00 0.00 0.00 2.40
3268 4303 6.390987 ACAACGAGAATAACAACGAGAATC 57.609 37.500 0.00 0.00 0.00 2.52
3269 4304 6.780706 AACAACGAGAATAACAACGAGAAT 57.219 33.333 0.00 0.00 0.00 2.40
3270 4305 7.878477 ATAACAACGAGAATAACAACGAGAA 57.122 32.000 0.00 0.00 0.00 2.87
3271 4306 7.216881 CGTATAACAACGAGAATAACAACGAGA 59.783 37.037 0.00 0.00 45.68 4.04
3272 4307 7.317901 CGTATAACAACGAGAATAACAACGAG 58.682 38.462 0.00 0.00 45.68 4.18
3273 4308 6.251163 CCGTATAACAACGAGAATAACAACGA 59.749 38.462 0.00 0.00 45.68 3.85
3274 4309 6.397243 CCGTATAACAACGAGAATAACAACG 58.603 40.000 0.00 0.00 45.68 4.10
3275 4310 6.311200 ACCCGTATAACAACGAGAATAACAAC 59.689 38.462 0.00 0.00 45.68 3.32
3276 4311 6.310956 CACCCGTATAACAACGAGAATAACAA 59.689 38.462 0.00 0.00 45.68 2.83
3277 4312 5.806502 CACCCGTATAACAACGAGAATAACA 59.193 40.000 0.00 0.00 45.68 2.41
3278 4313 5.276536 GCACCCGTATAACAACGAGAATAAC 60.277 44.000 0.00 0.00 45.68 1.89
3279 4314 4.805192 GCACCCGTATAACAACGAGAATAA 59.195 41.667 0.00 0.00 45.68 1.40
3280 4315 4.362279 GCACCCGTATAACAACGAGAATA 58.638 43.478 0.00 0.00 45.68 1.75
3281 4316 3.192466 GCACCCGTATAACAACGAGAAT 58.808 45.455 0.00 0.00 45.68 2.40
3282 4317 2.609350 GCACCCGTATAACAACGAGAA 58.391 47.619 0.00 0.00 45.68 2.87
3283 4318 1.135024 GGCACCCGTATAACAACGAGA 60.135 52.381 0.00 0.00 45.68 4.04
3284 4319 1.134907 AGGCACCCGTATAACAACGAG 60.135 52.381 0.00 0.00 45.68 4.18
3285 4320 0.896923 AGGCACCCGTATAACAACGA 59.103 50.000 0.00 0.00 45.68 3.85
3286 4321 2.195922 GTAGGCACCCGTATAACAACG 58.804 52.381 0.00 0.00 42.49 4.10
3287 4322 3.249986 TGTAGGCACCCGTATAACAAC 57.750 47.619 0.00 0.00 0.00 3.32
3288 4323 4.444536 GAATGTAGGCACCCGTATAACAA 58.555 43.478 0.00 0.00 0.00 2.83
3289 4324 3.491276 CGAATGTAGGCACCCGTATAACA 60.491 47.826 0.00 0.00 0.00 2.41
3290 4325 3.054878 CGAATGTAGGCACCCGTATAAC 58.945 50.000 0.00 0.00 0.00 1.89
3291 4326 2.694628 ACGAATGTAGGCACCCGTATAA 59.305 45.455 0.00 0.00 35.36 0.98
3292 4327 2.294233 GACGAATGTAGGCACCCGTATA 59.706 50.000 0.00 0.00 36.57 1.47
3293 4328 1.068127 GACGAATGTAGGCACCCGTAT 59.932 52.381 0.00 0.00 36.57 3.06
3294 4329 0.457035 GACGAATGTAGGCACCCGTA 59.543 55.000 0.00 0.00 36.57 4.02
3295 4330 1.217244 GACGAATGTAGGCACCCGT 59.783 57.895 0.00 0.00 38.21 5.28
3296 4331 1.876714 CGACGAATGTAGGCACCCG 60.877 63.158 0.00 0.00 0.00 5.28
3297 4332 0.104304 ATCGACGAATGTAGGCACCC 59.896 55.000 0.00 0.00 0.00 4.61
3298 4333 1.859080 GAATCGACGAATGTAGGCACC 59.141 52.381 0.00 0.00 0.00 5.01
3299 4334 2.535984 CAGAATCGACGAATGTAGGCAC 59.464 50.000 0.00 0.00 0.00 5.01
3300 4335 2.809446 CAGAATCGACGAATGTAGGCA 58.191 47.619 0.00 0.00 0.00 4.75
3301 4336 1.523095 GCAGAATCGACGAATGTAGGC 59.477 52.381 0.00 0.00 0.00 3.93
3302 4337 2.128035 GGCAGAATCGACGAATGTAGG 58.872 52.381 0.00 0.00 0.00 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.