Multiple sequence alignment - TraesCS7B01G455600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G455600 chr7B 100.000 3558 0 0 1 3558 716276900 716273343 0.000000e+00 6571.0
1 TraesCS7B01G455600 chr7B 84.797 1059 130 14 1527 2564 715082783 715081735 0.000000e+00 1035.0
2 TraesCS7B01G455600 chr7B 84.514 1059 133 14 1527 2564 714900484 714899436 0.000000e+00 1018.0
3 TraesCS7B01G455600 chr7B 84.478 1063 127 19 1527 2564 715154860 715153811 0.000000e+00 1014.0
4 TraesCS7B01G455600 chr7B 84.196 1063 130 19 1527 2564 715122180 715121131 0.000000e+00 998.0
5 TraesCS7B01G455600 chr7B 88.338 343 34 5 2417 2757 428836136 428835798 1.190000e-109 407.0
6 TraesCS7B01G455600 chr7D 96.867 1245 38 1 1505 2748 620214240 620215484 0.000000e+00 2082.0
7 TraesCS7B01G455600 chr7D 84.558 1075 131 19 1510 2559 619582688 619583752 0.000000e+00 1033.0
8 TraesCS7B01G455600 chr7D 84.480 1076 130 20 1510 2559 620583745 620584809 0.000000e+00 1027.0
9 TraesCS7B01G455600 chr7D 83.270 1052 134 20 1531 2565 619358578 619357552 0.000000e+00 929.0
10 TraesCS7B01G455600 chr7D 89.803 608 29 13 2780 3375 620215675 620216261 0.000000e+00 749.0
11 TraesCS7B01G455600 chr7D 85.851 629 47 16 858 1444 620213598 620214226 6.480000e-177 630.0
12 TraesCS7B01G455600 chr7D 86.047 473 42 15 2237 2704 414293052 414292599 1.480000e-133 486.0
13 TraesCS7B01G455600 chr7D 85.597 243 26 7 858 1091 414294320 414294078 2.740000e-61 246.0
14 TraesCS7B01G455600 chr7D 85.232 237 33 2 1158 1393 619582410 619582645 3.550000e-60 243.0
15 TraesCS7B01G455600 chr7D 84.388 237 35 2 1158 1393 620583467 620583702 7.680000e-57 231.0
16 TraesCS7B01G455600 chr7D 83.333 240 38 2 1157 1395 619359038 619358800 1.660000e-53 220.0
17 TraesCS7B01G455600 chr7D 98.148 54 0 1 1463 1516 94261267 94261319 3.780000e-15 93.5
18 TraesCS7B01G455600 chr7D 94.915 59 2 1 1450 1507 440985278 440985336 1.360000e-14 91.6
19 TraesCS7B01G455600 chr7A 86.085 1078 124 13 1505 2561 714032562 714033634 0.000000e+00 1136.0
20 TraesCS7B01G455600 chr7A 85.900 1078 126 13 1505 2561 714209423 714210495 0.000000e+00 1125.0
21 TraesCS7B01G455600 chr7A 83.364 1082 138 21 1510 2559 713834102 713835173 0.000000e+00 963.0
22 TraesCS7B01G455600 chr7A 96.089 537 21 0 1888 2424 714723651 714723115 0.000000e+00 876.0
23 TraesCS7B01G455600 chr7A 85.103 631 50 26 858 1444 714731995 714731365 3.930000e-169 604.0
24 TraesCS7B01G455600 chr7A 87.593 540 27 18 2752 3272 714722680 714722162 1.100000e-164 590.0
25 TraesCS7B01G455600 chr7A 95.029 342 17 0 1527 1868 714724293 714723952 4.040000e-149 538.0
26 TraesCS7B01G455600 chr7A 95.652 299 11 2 2459 2757 714723116 714722820 2.480000e-131 479.0
27 TraesCS7B01G455600 chr7A 90.441 272 18 4 1173 1444 714725547 714725284 5.650000e-93 351.0
28 TraesCS7B01G455600 chr7A 85.654 237 32 2 1158 1393 714032244 714032479 7.630000e-62 248.0
29 TraesCS7B01G455600 chr7A 85.654 237 32 2 1158 1393 714209105 714209340 7.630000e-62 248.0
30 TraesCS7B01G455600 chr4A 84.826 1061 126 16 1527 2564 700429352 700428304 0.000000e+00 1035.0
31 TraesCS7B01G455600 chr4A 87.942 622 70 5 1 621 100953305 100953922 0.000000e+00 728.0
32 TraesCS7B01G455600 chr4A 86.589 343 36 3 1 343 641580737 641580405 1.560000e-98 370.0
33 TraesCS7B01G455600 chr4A 85.345 232 28 4 391 620 641580393 641580166 5.940000e-58 235.0
34 TraesCS7B01G455600 chr4A 83.516 91 9 6 1463 1548 621290166 621290255 2.940000e-11 80.5
35 TraesCS7B01G455600 chr3D 89.727 623 53 7 1 623 433499392 433500003 0.000000e+00 785.0
36 TraesCS7B01G455600 chr3D 89.103 624 63 5 1 623 345246554 345245935 0.000000e+00 771.0
37 TraesCS7B01G455600 chr3D 87.500 80 7 3 1463 1541 138889909 138889986 4.890000e-14 89.8
38 TraesCS7B01G455600 chrUn 85.811 592 72 7 1510 2098 93249141 93248559 5.050000e-173 617.0
39 TraesCS7B01G455600 chrUn 85.232 237 33 2 1158 1393 93249419 93249184 3.550000e-60 243.0
40 TraesCS7B01G455600 chr5D 91.892 74 2 4 1449 1520 298759753 298759824 2.260000e-17 100.0
41 TraesCS7B01G455600 chr2A 93.443 61 2 2 1463 1522 197535098 197535039 4.890000e-14 89.8
42 TraesCS7B01G455600 chr4D 90.141 71 2 4 1446 1512 274460448 274460517 1.760000e-13 87.9
43 TraesCS7B01G455600 chr4B 88.158 76 4 5 1448 1521 606305557 606305629 6.330000e-13 86.1
44 TraesCS7B01G455600 chr2B 90.698 43 4 0 3054 3096 114564680 114564722 1.380000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G455600 chr7B 716273343 716276900 3557 True 6571.000000 6571 100.000000 1 3558 1 chr7B.!!$R6 3557
1 TraesCS7B01G455600 chr7B 715081735 715082783 1048 True 1035.000000 1035 84.797000 1527 2564 1 chr7B.!!$R3 1037
2 TraesCS7B01G455600 chr7B 714899436 714900484 1048 True 1018.000000 1018 84.514000 1527 2564 1 chr7B.!!$R2 1037
3 TraesCS7B01G455600 chr7B 715153811 715154860 1049 True 1014.000000 1014 84.478000 1527 2564 1 chr7B.!!$R5 1037
4 TraesCS7B01G455600 chr7B 715121131 715122180 1049 True 998.000000 998 84.196000 1527 2564 1 chr7B.!!$R4 1037
5 TraesCS7B01G455600 chr7D 620213598 620216261 2663 False 1153.666667 2082 90.840333 858 3375 3 chr7D.!!$F4 2517
6 TraesCS7B01G455600 chr7D 619582410 619583752 1342 False 638.000000 1033 84.895000 1158 2559 2 chr7D.!!$F3 1401
7 TraesCS7B01G455600 chr7D 620583467 620584809 1342 False 629.000000 1027 84.434000 1158 2559 2 chr7D.!!$F5 1401
8 TraesCS7B01G455600 chr7D 619357552 619359038 1486 True 574.500000 929 83.301500 1157 2565 2 chr7D.!!$R2 1408
9 TraesCS7B01G455600 chr7D 414292599 414294320 1721 True 366.000000 486 85.822000 858 2704 2 chr7D.!!$R1 1846
10 TraesCS7B01G455600 chr7A 713834102 713835173 1071 False 963.000000 963 83.364000 1510 2559 1 chr7A.!!$F1 1049
11 TraesCS7B01G455600 chr7A 714032244 714033634 1390 False 692.000000 1136 85.869500 1158 2561 2 chr7A.!!$F2 1403
12 TraesCS7B01G455600 chr7A 714209105 714210495 1390 False 686.500000 1125 85.777000 1158 2561 2 chr7A.!!$F3 1403
13 TraesCS7B01G455600 chr7A 714731365 714731995 630 True 604.000000 604 85.103000 858 1444 1 chr7A.!!$R1 586
14 TraesCS7B01G455600 chr7A 714722162 714725547 3385 True 566.800000 876 92.960800 1173 3272 5 chr7A.!!$R2 2099
15 TraesCS7B01G455600 chr4A 700428304 700429352 1048 True 1035.000000 1035 84.826000 1527 2564 1 chr4A.!!$R1 1037
16 TraesCS7B01G455600 chr4A 100953305 100953922 617 False 728.000000 728 87.942000 1 621 1 chr4A.!!$F1 620
17 TraesCS7B01G455600 chr4A 641580166 641580737 571 True 302.500000 370 85.967000 1 620 2 chr4A.!!$R2 619
18 TraesCS7B01G455600 chr3D 433499392 433500003 611 False 785.000000 785 89.727000 1 623 1 chr3D.!!$F2 622
19 TraesCS7B01G455600 chr3D 345245935 345246554 619 True 771.000000 771 89.103000 1 623 1 chr3D.!!$R1 622
20 TraesCS7B01G455600 chrUn 93248559 93249419 860 True 430.000000 617 85.521500 1158 2098 2 chrUn.!!$R1 940

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
703 706 0.031994 CGCCACAAAAGGTCAAAGGG 59.968 55.0 0.0 0.0 0.00 3.95 F
750 753 0.102481 CGTCCAGGTGGTAGGATTCG 59.898 60.0 0.0 0.0 36.11 3.34 F
802 805 0.257328 TCCAGGTGAGAGCGAGAGAT 59.743 55.0 0.0 0.0 0.00 2.75 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2183 3785 1.023502 GCGGAGTAGAGGTCCAGTAC 58.976 60.000 0.0 0.0 33.14 2.73 R
2452 4104 2.095161 GTGTGTCTCGTCCCAGTAGAAG 60.095 54.545 0.0 0.0 0.00 2.85 R
2750 4402 1.270274 CTTGCTACAAAGTGCATGGCA 59.730 47.619 0.0 0.0 39.07 4.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
86 87 3.692593 ACGTTTGTAGCTTTTTCCACTGT 59.307 39.130 0.00 0.00 0.00 3.55
131 133 6.970484 TCTCTATTGCTGGTTGAAACTTTTC 58.030 36.000 0.00 0.00 37.69 2.29
167 170 4.450082 AGCTTTTTCTTTCAACGGTTGT 57.550 36.364 19.47 0.00 0.00 3.32
182 185 0.165944 GTTGTAGCAAACGCGAGCAT 59.834 50.000 15.93 6.63 0.00 3.79
190 193 2.748058 AAACGCGAGCATGGTTCCCT 62.748 55.000 15.93 0.00 0.00 4.20
219 222 3.649277 ATGGTGACCGTCGCAGCTC 62.649 63.158 13.90 0.00 34.98 4.09
271 274 4.514577 CCGGGTCGCACCTAGCAG 62.515 72.222 0.00 0.00 46.13 4.24
302 305 2.040544 CAACTCGACACCATGCCCC 61.041 63.158 0.00 0.00 0.00 5.80
307 310 3.070576 GACACCATGCCCCTTGCC 61.071 66.667 0.00 0.00 40.16 4.52
347 350 2.749044 CCTTGTGGCAGCTCGCAT 60.749 61.111 9.78 0.00 45.17 4.73
352 355 2.435410 TGGCAGCTCGCATGTGAG 60.435 61.111 28.24 28.24 45.17 3.51
372 375 2.438434 CATGGCGGGAAGTGGGAC 60.438 66.667 0.00 0.00 0.00 4.46
383 386 2.034221 GTGGGACTGGGGAGCAAC 59.966 66.667 0.00 0.00 0.00 4.17
384 387 3.636231 TGGGACTGGGGAGCAACG 61.636 66.667 0.00 0.00 0.00 4.10
385 388 3.637273 GGGACTGGGGAGCAACGT 61.637 66.667 0.00 0.00 0.00 3.99
386 389 2.047179 GGACTGGGGAGCAACGTC 60.047 66.667 0.00 0.00 0.00 4.34
387 390 2.047179 GACTGGGGAGCAACGTCC 60.047 66.667 0.00 0.00 35.64 4.79
388 391 2.526873 ACTGGGGAGCAACGTCCT 60.527 61.111 0.00 0.00 36.75 3.85
389 392 2.266055 CTGGGGAGCAACGTCCTC 59.734 66.667 7.46 7.46 37.64 3.71
390 393 2.203788 TGGGGAGCAACGTCCTCT 60.204 61.111 13.73 0.78 38.05 3.69
391 394 2.266055 GGGGAGCAACGTCCTCTG 59.734 66.667 13.73 0.00 33.74 3.35
407 410 3.367992 CTCTGGAGATGAGGATGTTCG 57.632 52.381 0.00 0.00 0.00 3.95
456 459 2.649742 TGAGAGTGGAAGGGGAGATT 57.350 50.000 0.00 0.00 0.00 2.40
458 461 2.225624 TGAGAGTGGAAGGGGAGATTGA 60.226 50.000 0.00 0.00 0.00 2.57
478 481 4.845580 AAGAGCGCGAGGCCATGG 62.846 66.667 12.10 7.63 45.17 3.66
501 504 1.430228 GAGCGTCGGAAGAGAGGAC 59.570 63.158 0.00 0.00 43.49 3.85
505 508 1.430228 GTCGGAAGAGAGGACGAGC 59.570 63.158 0.00 0.00 43.49 5.03
509 512 3.743091 GAAGAGAGGACGAGCGCGG 62.743 68.421 15.86 0.00 43.17 6.46
549 552 6.658555 TTTGGGAAGAGGATAAGAAAGGAT 57.341 37.500 0.00 0.00 0.00 3.24
554 557 6.295249 GGAAGAGGATAAGAAAGGATGAAGG 58.705 44.000 0.00 0.00 0.00 3.46
560 563 5.240403 GGATAAGAAAGGATGAAGGATGTGC 59.760 44.000 0.00 0.00 0.00 4.57
566 569 1.718757 GATGAAGGATGTGCGTGGGC 61.719 60.000 0.00 0.00 40.52 5.36
567 570 3.134127 GAAGGATGTGCGTGGGCC 61.134 66.667 0.00 0.00 38.85 5.80
568 571 4.740822 AAGGATGTGCGTGGGCCC 62.741 66.667 17.59 17.59 38.85 5.80
600 603 3.223589 GCTTTGGCGTTGGTGGGT 61.224 61.111 0.00 0.00 0.00 4.51
601 604 2.727544 CTTTGGCGTTGGTGGGTG 59.272 61.111 0.00 0.00 0.00 4.61
602 605 2.043852 TTTGGCGTTGGTGGGTGT 60.044 55.556 0.00 0.00 0.00 4.16
603 606 0.820074 CTTTGGCGTTGGTGGGTGTA 60.820 55.000 0.00 0.00 0.00 2.90
604 607 0.820074 TTTGGCGTTGGTGGGTGTAG 60.820 55.000 0.00 0.00 0.00 2.74
605 608 3.053896 GGCGTTGGTGGGTGTAGC 61.054 66.667 0.00 0.00 0.00 3.58
606 609 3.419759 GCGTTGGTGGGTGTAGCG 61.420 66.667 0.00 0.00 0.00 4.26
607 610 3.419759 CGTTGGTGGGTGTAGCGC 61.420 66.667 0.00 0.00 0.00 5.92
608 611 2.281208 GTTGGTGGGTGTAGCGCA 60.281 61.111 11.47 0.00 37.73 6.09
609 612 2.031919 TTGGTGGGTGTAGCGCAG 59.968 61.111 11.47 0.00 40.84 5.18
628 631 3.529504 GCGTGTGAGCGACGTTTA 58.470 55.556 0.00 0.00 39.08 2.01
629 632 1.127225 GCGTGTGAGCGACGTTTAC 59.873 57.895 0.00 0.00 39.08 2.01
630 633 1.771044 CGTGTGAGCGACGTTTACC 59.229 57.895 4.25 0.00 32.06 2.85
631 634 0.662374 CGTGTGAGCGACGTTTACCT 60.662 55.000 4.25 0.00 32.06 3.08
632 635 1.400113 CGTGTGAGCGACGTTTACCTA 60.400 52.381 4.25 0.00 32.06 3.08
633 636 2.730090 CGTGTGAGCGACGTTTACCTAT 60.730 50.000 4.25 0.00 32.06 2.57
634 637 3.485711 CGTGTGAGCGACGTTTACCTATA 60.486 47.826 4.25 0.00 32.06 1.31
635 638 4.414852 GTGTGAGCGACGTTTACCTATAA 58.585 43.478 4.25 0.00 0.00 0.98
636 639 5.039333 GTGTGAGCGACGTTTACCTATAAT 58.961 41.667 4.25 0.00 0.00 1.28
637 640 6.201517 GTGTGAGCGACGTTTACCTATAATA 58.798 40.000 4.25 0.00 0.00 0.98
638 641 6.692681 GTGTGAGCGACGTTTACCTATAATAA 59.307 38.462 4.25 0.00 0.00 1.40
639 642 7.220683 GTGTGAGCGACGTTTACCTATAATAAA 59.779 37.037 4.25 0.00 0.00 1.40
640 643 7.922278 TGTGAGCGACGTTTACCTATAATAAAT 59.078 33.333 4.25 0.00 0.00 1.40
641 644 9.398170 GTGAGCGACGTTTACCTATAATAAATA 57.602 33.333 0.00 0.00 0.00 1.40
678 681 4.514781 GCATCATGCATGGACATGTATT 57.485 40.909 25.97 0.00 46.15 1.89
679 682 4.878439 GCATCATGCATGGACATGTATTT 58.122 39.130 25.97 2.43 46.15 1.40
680 683 5.294356 GCATCATGCATGGACATGTATTTT 58.706 37.500 25.97 2.12 46.15 1.82
681 684 6.448852 GCATCATGCATGGACATGTATTTTA 58.551 36.000 25.97 2.55 46.15 1.52
682 685 6.584942 GCATCATGCATGGACATGTATTTTAG 59.415 38.462 25.97 3.40 46.15 1.85
683 686 7.522562 GCATCATGCATGGACATGTATTTTAGA 60.523 37.037 25.97 7.96 46.15 2.10
684 687 7.263100 TCATGCATGGACATGTATTTTAGAC 57.737 36.000 25.97 0.00 46.15 2.59
685 688 5.733226 TGCATGGACATGTATTTTAGACG 57.267 39.130 13.29 0.00 40.80 4.18
686 689 4.035091 TGCATGGACATGTATTTTAGACGC 59.965 41.667 13.29 0.00 40.80 5.19
687 690 4.554723 GCATGGACATGTATTTTAGACGCC 60.555 45.833 13.29 0.00 40.80 5.68
688 691 4.209307 TGGACATGTATTTTAGACGCCA 57.791 40.909 0.00 0.00 0.00 5.69
689 692 3.936453 TGGACATGTATTTTAGACGCCAC 59.064 43.478 0.00 0.00 0.00 5.01
690 693 3.936453 GGACATGTATTTTAGACGCCACA 59.064 43.478 0.00 0.00 0.00 4.17
691 694 4.393680 GGACATGTATTTTAGACGCCACAA 59.606 41.667 0.00 0.00 0.00 3.33
692 695 5.106475 GGACATGTATTTTAGACGCCACAAA 60.106 40.000 0.00 0.00 0.00 2.83
693 696 6.320494 ACATGTATTTTAGACGCCACAAAA 57.680 33.333 0.00 0.00 0.00 2.44
694 697 6.378582 ACATGTATTTTAGACGCCACAAAAG 58.621 36.000 0.00 0.00 0.00 2.27
695 698 5.365403 TGTATTTTAGACGCCACAAAAGG 57.635 39.130 0.00 0.00 0.00 3.11
696 699 4.822896 TGTATTTTAGACGCCACAAAAGGT 59.177 37.500 0.00 0.00 0.00 3.50
697 700 3.974871 TTTTAGACGCCACAAAAGGTC 57.025 42.857 0.00 0.00 0.00 3.85
698 701 2.623878 TTAGACGCCACAAAAGGTCA 57.376 45.000 0.00 0.00 31.93 4.02
699 702 2.623878 TAGACGCCACAAAAGGTCAA 57.376 45.000 0.00 0.00 31.93 3.18
700 703 1.757682 AGACGCCACAAAAGGTCAAA 58.242 45.000 0.00 0.00 31.93 2.69
701 704 1.676006 AGACGCCACAAAAGGTCAAAG 59.324 47.619 0.00 0.00 31.93 2.77
702 705 0.744281 ACGCCACAAAAGGTCAAAGG 59.256 50.000 0.00 0.00 0.00 3.11
703 706 0.031994 CGCCACAAAAGGTCAAAGGG 59.968 55.000 0.00 0.00 0.00 3.95
704 707 1.408969 GCCACAAAAGGTCAAAGGGA 58.591 50.000 0.00 0.00 0.00 4.20
705 708 1.341209 GCCACAAAAGGTCAAAGGGAG 59.659 52.381 0.00 0.00 0.00 4.30
706 709 1.341209 CCACAAAAGGTCAAAGGGAGC 59.659 52.381 0.00 0.00 44.43 4.70
711 714 4.934989 GGTCAAAGGGAGCGGTAG 57.065 61.111 0.00 0.00 33.78 3.18
712 715 1.221021 GGTCAAAGGGAGCGGTAGG 59.779 63.158 0.00 0.00 33.78 3.18
713 716 1.551019 GGTCAAAGGGAGCGGTAGGT 61.551 60.000 0.00 0.00 33.78 3.08
714 717 1.188863 GTCAAAGGGAGCGGTAGGTA 58.811 55.000 0.00 0.00 0.00 3.08
715 718 1.551883 GTCAAAGGGAGCGGTAGGTAA 59.448 52.381 0.00 0.00 0.00 2.85
716 719 2.027837 GTCAAAGGGAGCGGTAGGTAAA 60.028 50.000 0.00 0.00 0.00 2.01
717 720 2.027837 TCAAAGGGAGCGGTAGGTAAAC 60.028 50.000 0.00 0.00 0.00 2.01
718 721 1.948391 AAGGGAGCGGTAGGTAAACT 58.052 50.000 0.00 0.00 0.00 2.66
719 722 1.948391 AGGGAGCGGTAGGTAAACTT 58.052 50.000 0.00 0.00 0.00 2.66
720 723 1.553704 AGGGAGCGGTAGGTAAACTTG 59.446 52.381 0.00 0.00 0.00 3.16
721 724 1.551883 GGGAGCGGTAGGTAAACTTGA 59.448 52.381 0.00 0.00 0.00 3.02
722 725 2.027837 GGGAGCGGTAGGTAAACTTGAA 60.028 50.000 0.00 0.00 0.00 2.69
723 726 3.370209 GGGAGCGGTAGGTAAACTTGAAT 60.370 47.826 0.00 0.00 0.00 2.57
724 727 3.869832 GGAGCGGTAGGTAAACTTGAATC 59.130 47.826 0.00 0.00 0.00 2.52
725 728 3.869832 GAGCGGTAGGTAAACTTGAATCC 59.130 47.826 0.00 0.00 0.00 3.01
726 729 3.518303 AGCGGTAGGTAAACTTGAATCCT 59.482 43.478 0.00 0.00 0.00 3.24
727 730 3.869832 GCGGTAGGTAAACTTGAATCCTC 59.130 47.826 0.00 0.00 0.00 3.71
728 731 4.110482 CGGTAGGTAAACTTGAATCCTCG 58.890 47.826 0.00 0.00 0.00 4.63
729 732 4.381292 CGGTAGGTAAACTTGAATCCTCGT 60.381 45.833 0.00 0.00 0.00 4.18
730 733 5.163622 CGGTAGGTAAACTTGAATCCTCGTA 60.164 44.000 0.00 0.00 0.00 3.43
731 734 6.038985 GGTAGGTAAACTTGAATCCTCGTAC 58.961 44.000 0.00 0.00 0.00 3.67
732 735 4.741342 AGGTAAACTTGAATCCTCGTACG 58.259 43.478 9.53 9.53 0.00 3.67
733 736 4.219288 AGGTAAACTTGAATCCTCGTACGT 59.781 41.667 16.05 0.00 0.00 3.57
734 737 4.560427 GGTAAACTTGAATCCTCGTACGTC 59.440 45.833 16.05 5.49 0.00 4.34
735 738 2.935481 ACTTGAATCCTCGTACGTCC 57.065 50.000 16.05 0.36 0.00 4.79
736 739 2.165167 ACTTGAATCCTCGTACGTCCA 58.835 47.619 16.05 0.00 0.00 4.02
737 740 2.163815 ACTTGAATCCTCGTACGTCCAG 59.836 50.000 16.05 8.56 0.00 3.86
738 741 1.100510 TGAATCCTCGTACGTCCAGG 58.899 55.000 16.05 14.79 0.00 4.45
739 742 1.101331 GAATCCTCGTACGTCCAGGT 58.899 55.000 16.05 0.00 0.00 4.00
740 743 0.815734 AATCCTCGTACGTCCAGGTG 59.184 55.000 16.05 0.00 0.00 4.00
741 744 1.035932 ATCCTCGTACGTCCAGGTGG 61.036 60.000 16.05 7.44 0.00 4.61
742 745 1.975407 CCTCGTACGTCCAGGTGGT 60.975 63.158 16.05 0.00 36.34 4.16
743 746 0.677731 CCTCGTACGTCCAGGTGGTA 60.678 60.000 16.05 0.00 36.34 3.25
744 747 0.731417 CTCGTACGTCCAGGTGGTAG 59.269 60.000 16.05 0.00 36.34 3.18
745 748 0.677731 TCGTACGTCCAGGTGGTAGG 60.678 60.000 16.05 6.21 36.34 3.18
746 749 0.677731 CGTACGTCCAGGTGGTAGGA 60.678 60.000 7.22 0.00 36.34 2.94
747 750 1.772836 GTACGTCCAGGTGGTAGGAT 58.227 55.000 0.00 0.00 36.11 3.24
748 751 2.105766 GTACGTCCAGGTGGTAGGATT 58.894 52.381 0.00 0.00 36.11 3.01
749 752 1.192428 ACGTCCAGGTGGTAGGATTC 58.808 55.000 0.00 0.00 36.11 2.52
750 753 0.102481 CGTCCAGGTGGTAGGATTCG 59.898 60.000 0.00 0.00 36.11 3.34
751 754 1.481871 GTCCAGGTGGTAGGATTCGA 58.518 55.000 0.00 0.00 36.11 3.71
752 755 1.136500 GTCCAGGTGGTAGGATTCGAC 59.864 57.143 0.00 0.00 36.11 4.20
753 756 1.006758 TCCAGGTGGTAGGATTCGACT 59.993 52.381 0.00 0.00 36.34 4.18
754 757 1.831736 CCAGGTGGTAGGATTCGACTT 59.168 52.381 0.00 0.00 0.00 3.01
755 758 2.236395 CCAGGTGGTAGGATTCGACTTT 59.764 50.000 0.00 0.00 0.00 2.66
756 759 3.307480 CCAGGTGGTAGGATTCGACTTTT 60.307 47.826 0.00 0.00 0.00 2.27
757 760 3.684788 CAGGTGGTAGGATTCGACTTTTG 59.315 47.826 0.00 0.00 0.00 2.44
758 761 3.581332 AGGTGGTAGGATTCGACTTTTGA 59.419 43.478 0.00 0.00 0.00 2.69
759 762 4.041198 AGGTGGTAGGATTCGACTTTTGAA 59.959 41.667 0.00 0.00 0.00 2.69
760 763 4.392138 GGTGGTAGGATTCGACTTTTGAAG 59.608 45.833 0.00 0.00 0.00 3.02
761 764 4.995487 GTGGTAGGATTCGACTTTTGAAGT 59.005 41.667 0.00 0.00 46.38 3.01
762 765 5.469084 GTGGTAGGATTCGACTTTTGAAGTT 59.531 40.000 0.00 0.00 43.03 2.66
763 766 6.647895 GTGGTAGGATTCGACTTTTGAAGTTA 59.352 38.462 0.00 0.00 43.03 2.24
764 767 7.172019 GTGGTAGGATTCGACTTTTGAAGTTAA 59.828 37.037 0.00 0.00 43.03 2.01
765 768 7.716123 TGGTAGGATTCGACTTTTGAAGTTAAA 59.284 33.333 0.00 0.00 43.03 1.52
766 769 8.013947 GGTAGGATTCGACTTTTGAAGTTAAAC 58.986 37.037 0.00 0.00 43.03 2.01
767 770 7.562454 AGGATTCGACTTTTGAAGTTAAACA 57.438 32.000 0.00 0.00 43.03 2.83
768 771 7.992008 AGGATTCGACTTTTGAAGTTAAACAA 58.008 30.769 0.00 0.00 43.03 2.83
769 772 8.129211 AGGATTCGACTTTTGAAGTTAAACAAG 58.871 33.333 0.00 0.00 43.03 3.16
770 773 8.126700 GGATTCGACTTTTGAAGTTAAACAAGA 58.873 33.333 0.00 0.00 43.03 3.02
771 774 9.159470 GATTCGACTTTTGAAGTTAAACAAGAG 57.841 33.333 0.00 0.00 43.03 2.85
772 775 7.605410 TCGACTTTTGAAGTTAAACAAGAGT 57.395 32.000 11.40 11.40 43.03 3.24
773 776 7.681903 TCGACTTTTGAAGTTAAACAAGAGTC 58.318 34.615 19.78 19.78 45.79 3.36
774 777 6.905609 CGACTTTTGAAGTTAAACAAGAGTCC 59.094 38.462 21.63 12.72 46.14 3.85
775 778 7.096884 ACTTTTGAAGTTAAACAAGAGTCCC 57.903 36.000 0.00 0.00 39.04 4.46
776 779 6.661805 ACTTTTGAAGTTAAACAAGAGTCCCA 59.338 34.615 0.00 0.00 39.04 4.37
777 780 7.342026 ACTTTTGAAGTTAAACAAGAGTCCCAT 59.658 33.333 0.00 0.00 39.04 4.00
778 781 6.633500 TTGAAGTTAAACAAGAGTCCCATG 57.367 37.500 0.00 0.00 0.00 3.66
779 782 5.070001 TGAAGTTAAACAAGAGTCCCATGG 58.930 41.667 4.14 4.14 0.00 3.66
780 783 4.724279 AGTTAAACAAGAGTCCCATGGT 57.276 40.909 11.73 0.00 0.00 3.55
781 784 4.652822 AGTTAAACAAGAGTCCCATGGTC 58.347 43.478 11.73 1.35 0.00 4.02
782 785 2.586648 AAACAAGAGTCCCATGGTCC 57.413 50.000 11.73 0.00 0.00 4.46
783 786 1.747444 AACAAGAGTCCCATGGTCCT 58.253 50.000 11.73 5.48 0.00 3.85
784 787 1.280457 ACAAGAGTCCCATGGTCCTC 58.720 55.000 11.73 14.62 0.00 3.71
785 788 0.543749 CAAGAGTCCCATGGTCCTCC 59.456 60.000 19.24 6.72 0.00 4.30
794 797 4.874521 TGGTCCTCCAGGTGAGAG 57.125 61.111 0.00 0.00 44.42 3.20
795 798 1.610673 TGGTCCTCCAGGTGAGAGC 60.611 63.158 0.00 0.00 44.42 4.09
796 799 2.716017 GGTCCTCCAGGTGAGAGCG 61.716 68.421 0.00 0.00 44.42 5.03
797 800 1.679305 GTCCTCCAGGTGAGAGCGA 60.679 63.158 0.00 0.00 44.42 4.93
798 801 1.379176 TCCTCCAGGTGAGAGCGAG 60.379 63.158 0.00 0.00 44.42 5.03
799 802 1.379176 CCTCCAGGTGAGAGCGAGA 60.379 63.158 0.00 0.00 44.42 4.04
800 803 1.383456 CCTCCAGGTGAGAGCGAGAG 61.383 65.000 0.00 0.00 44.42 3.20
801 804 0.393673 CTCCAGGTGAGAGCGAGAGA 60.394 60.000 0.00 0.00 44.42 3.10
802 805 0.257328 TCCAGGTGAGAGCGAGAGAT 59.743 55.000 0.00 0.00 0.00 2.75
813 816 3.742433 AGCGAGAGATCAATTGGGTAG 57.258 47.619 5.42 0.00 0.00 3.18
814 817 2.139118 GCGAGAGATCAATTGGGTAGC 58.861 52.381 5.42 0.00 0.00 3.58
815 818 2.224161 GCGAGAGATCAATTGGGTAGCT 60.224 50.000 5.42 0.00 0.00 3.32
816 819 3.005897 GCGAGAGATCAATTGGGTAGCTA 59.994 47.826 5.42 0.00 0.00 3.32
817 820 4.804108 CGAGAGATCAATTGGGTAGCTAG 58.196 47.826 5.42 0.00 0.00 3.42
818 821 4.321601 CGAGAGATCAATTGGGTAGCTAGG 60.322 50.000 5.42 0.00 0.00 3.02
819 822 3.326297 AGAGATCAATTGGGTAGCTAGGC 59.674 47.826 5.42 0.00 0.00 3.93
820 823 3.321950 AGATCAATTGGGTAGCTAGGCT 58.678 45.455 5.42 0.00 43.41 4.58
821 824 4.493618 AGATCAATTGGGTAGCTAGGCTA 58.506 43.478 5.42 0.00 40.44 3.93
822 825 4.530161 AGATCAATTGGGTAGCTAGGCTAG 59.470 45.833 17.33 17.33 42.11 3.42
823 826 3.654273 TCAATTGGGTAGCTAGGCTAGT 58.346 45.455 21.92 11.67 42.11 2.57
824 827 4.037927 TCAATTGGGTAGCTAGGCTAGTT 58.962 43.478 21.92 18.69 42.11 2.24
825 828 4.473559 TCAATTGGGTAGCTAGGCTAGTTT 59.526 41.667 21.92 13.36 42.11 2.66
826 829 5.664006 TCAATTGGGTAGCTAGGCTAGTTTA 59.336 40.000 21.92 12.43 42.11 2.01
827 830 6.157297 TCAATTGGGTAGCTAGGCTAGTTTAA 59.843 38.462 21.92 10.39 42.11 1.52
828 831 6.570654 ATTGGGTAGCTAGGCTAGTTTAAA 57.429 37.500 21.92 10.27 42.11 1.52
829 832 5.349061 TGGGTAGCTAGGCTAGTTTAAAC 57.651 43.478 21.92 10.47 42.11 2.01
830 833 4.778958 TGGGTAGCTAGGCTAGTTTAAACA 59.221 41.667 21.92 11.85 42.11 2.83
831 834 5.427481 TGGGTAGCTAGGCTAGTTTAAACAT 59.573 40.000 21.92 8.08 42.11 2.71
832 835 6.612456 TGGGTAGCTAGGCTAGTTTAAACATA 59.388 38.462 21.92 8.74 42.11 2.29
833 836 7.153315 GGGTAGCTAGGCTAGTTTAAACATAG 58.847 42.308 21.92 17.06 42.11 2.23
834 837 7.015001 GGGTAGCTAGGCTAGTTTAAACATAGA 59.985 40.741 21.92 2.16 42.11 1.98
835 838 8.083462 GGTAGCTAGGCTAGTTTAAACATAGAG 58.917 40.741 21.92 11.84 42.11 2.43
836 839 7.663043 AGCTAGGCTAGTTTAAACATAGAGT 57.337 36.000 21.92 10.89 36.99 3.24
837 840 8.763984 AGCTAGGCTAGTTTAAACATAGAGTA 57.236 34.615 21.92 11.30 36.99 2.59
838 841 8.631797 AGCTAGGCTAGTTTAAACATAGAGTAC 58.368 37.037 21.92 8.82 36.99 2.73
839 842 8.411683 GCTAGGCTAGTTTAAACATAGAGTACA 58.588 37.037 21.92 4.15 0.00 2.90
842 845 8.422566 AGGCTAGTTTAAACATAGAGTACATCC 58.577 37.037 20.06 11.74 0.00 3.51
843 846 7.381678 GGCTAGTTTAAACATAGAGTACATCCG 59.618 40.741 20.06 0.00 0.00 4.18
844 847 8.133627 GCTAGTTTAAACATAGAGTACATCCGA 58.866 37.037 20.06 0.00 0.00 4.55
846 849 8.699283 AGTTTAAACATAGAGTACATCCGAAC 57.301 34.615 20.06 0.00 0.00 3.95
847 850 8.529476 AGTTTAAACATAGAGTACATCCGAACT 58.471 33.333 20.06 0.00 0.00 3.01
848 851 9.793252 GTTTAAACATAGAGTACATCCGAACTA 57.207 33.333 13.51 0.00 0.00 2.24
851 854 6.821031 ACATAGAGTACATCCGAACTATCC 57.179 41.667 0.00 0.00 0.00 2.59
852 855 5.411977 ACATAGAGTACATCCGAACTATCCG 59.588 44.000 0.00 0.00 0.00 4.18
853 856 2.553172 AGAGTACATCCGAACTATCCGC 59.447 50.000 0.00 0.00 0.00 5.54
854 857 1.266175 AGTACATCCGAACTATCCGCG 59.734 52.381 0.00 0.00 0.00 6.46
855 858 0.594602 TACATCCGAACTATCCGCGG 59.405 55.000 22.12 22.12 46.08 6.46
856 859 1.362717 CATCCGAACTATCCGCGGT 59.637 57.895 27.15 15.22 45.02 5.68
869 872 2.745728 CGCGGTCGGTTATGAAGTT 58.254 52.632 0.00 0.00 0.00 2.66
883 888 2.055838 TGAAGTTCACATGACGTACGC 58.944 47.619 16.72 8.98 0.00 4.42
886 891 0.668096 GTTCACATGACGTACGCCCA 60.668 55.000 16.72 14.17 0.00 5.36
927 940 1.050988 AGCTCGGCCATACACCATCT 61.051 55.000 2.24 0.00 0.00 2.90
934 947 1.421268 GCCATACACCATCTCATCCCA 59.579 52.381 0.00 0.00 0.00 4.37
957 970 3.347590 TCCTCCTCCCTCCGCAGA 61.348 66.667 0.00 0.00 0.00 4.26
1021 1052 1.874345 GAAGCTCCTTCCGACCGTCA 61.874 60.000 0.00 0.00 34.71 4.35
1039 1070 1.036707 CATCCTTCTCCTCCTCGTCC 58.963 60.000 0.00 0.00 0.00 4.79
1050 1081 0.537188 TCCTCGTCCTCCTTGCATTC 59.463 55.000 0.00 0.00 0.00 2.67
1093 1125 1.880027 ACTTACTGCCTTGCTTTTCCG 59.120 47.619 0.00 0.00 0.00 4.30
1113 1170 3.426859 CCGTATCATCGAGTTCTTCATGC 59.573 47.826 0.00 0.00 0.00 4.06
1122 1179 1.350351 AGTTCTTCATGCTCTGCCTGT 59.650 47.619 0.00 0.00 0.00 4.00
1145 1203 4.242475 GTCCACGAATGTACTGACATGAA 58.758 43.478 0.00 0.00 45.93 2.57
1146 1204 4.870426 GTCCACGAATGTACTGACATGAAT 59.130 41.667 0.00 0.00 45.93 2.57
1147 1205 6.040247 GTCCACGAATGTACTGACATGAATA 58.960 40.000 0.00 0.00 45.93 1.75
1189 1264 1.676678 GCACACCTAGGGCTCATCGA 61.677 60.000 14.81 0.00 45.63 3.59
1192 1267 1.332195 CACCTAGGGCTCATCGATCA 58.668 55.000 14.81 0.00 0.00 2.92
1453 1552 7.789273 TTAGACTAGTGCTAGACATGTACTC 57.211 40.000 12.65 0.00 36.97 2.59
1454 1553 5.127491 AGACTAGTGCTAGACATGTACTCC 58.873 45.833 12.65 0.00 36.97 3.85
1455 1554 4.208746 ACTAGTGCTAGACATGTACTCCC 58.791 47.826 12.65 0.00 36.97 4.30
1457 1556 3.292460 AGTGCTAGACATGTACTCCCTC 58.708 50.000 0.00 0.00 0.00 4.30
1458 1557 3.053245 AGTGCTAGACATGTACTCCCTCT 60.053 47.826 0.00 0.00 0.00 3.69
1459 1558 4.166337 AGTGCTAGACATGTACTCCCTCTA 59.834 45.833 0.00 0.00 0.00 2.43
1461 1560 5.360144 GTGCTAGACATGTACTCCCTCTAAA 59.640 44.000 0.00 0.00 0.00 1.85
1463 1562 6.127423 TGCTAGACATGTACTCCCTCTAAAAC 60.127 42.308 0.00 0.00 0.00 2.43
1464 1563 6.097129 GCTAGACATGTACTCCCTCTAAAACT 59.903 42.308 0.00 0.00 0.00 2.66
1465 1564 6.936968 AGACATGTACTCCCTCTAAAACTT 57.063 37.500 0.00 0.00 0.00 2.66
1468 1567 8.532819 AGACATGTACTCCCTCTAAAACTTTAG 58.467 37.037 0.00 3.26 41.10 1.85
1469 1568 8.203681 ACATGTACTCCCTCTAAAACTTTAGT 57.796 34.615 0.00 0.00 40.69 2.24
1470 1569 8.095169 ACATGTACTCCCTCTAAAACTTTAGTG 58.905 37.037 0.00 6.69 40.69 2.74
1471 1570 7.844493 TGTACTCCCTCTAAAACTTTAGTGA 57.156 36.000 11.17 6.05 40.69 3.41
1472 1571 8.431910 TGTACTCCCTCTAAAACTTTAGTGAT 57.568 34.615 11.17 0.67 40.69 3.06
1473 1572 8.529476 TGTACTCCCTCTAAAACTTTAGTGATC 58.471 37.037 11.17 0.00 40.69 2.92
1474 1573 7.800300 ACTCCCTCTAAAACTTTAGTGATCT 57.200 36.000 11.17 0.00 40.69 2.75
1475 1574 8.896722 ACTCCCTCTAAAACTTTAGTGATCTA 57.103 34.615 11.17 0.00 40.69 1.98
1476 1575 9.322769 ACTCCCTCTAAAACTTTAGTGATCTAA 57.677 33.333 11.17 0.00 40.69 2.10
1478 1577 9.939802 TCCCTCTAAAACTTTAGTGATCTAAAC 57.060 33.333 11.17 0.00 40.05 2.01
1479 1578 8.870879 CCCTCTAAAACTTTAGTGATCTAAACG 58.129 37.037 11.17 0.00 40.05 3.60
1480 1579 8.381387 CCTCTAAAACTTTAGTGATCTAAACGC 58.619 37.037 11.17 0.00 40.05 4.84
1481 1580 9.141400 CTCTAAAACTTTAGTGATCTAAACGCT 57.859 33.333 8.65 0.00 40.05 5.07
1482 1581 9.136952 TCTAAAACTTTAGTGATCTAAACGCTC 57.863 33.333 8.65 0.00 40.05 5.03
1483 1582 7.964604 AAAACTTTAGTGATCTAAACGCTCT 57.035 32.000 0.00 0.00 40.05 4.09
1484 1583 7.964604 AAACTTTAGTGATCTAAACGCTCTT 57.035 32.000 0.00 0.00 40.05 2.85
1485 1584 9.485206 AAAACTTTAGTGATCTAAACGCTCTTA 57.515 29.630 0.00 0.00 40.05 2.10
1486 1585 9.654663 AAACTTTAGTGATCTAAACGCTCTTAT 57.345 29.630 0.00 0.00 40.05 1.73
1501 1600 9.530633 AAACGCTCTTATATTAGTTTACAGAGG 57.469 33.333 0.00 0.00 31.14 3.69
1631 2864 4.700700 TCACATCAGATCAATCTTGCGAT 58.299 39.130 0.00 0.00 34.22 4.58
1632 2865 4.510340 TCACATCAGATCAATCTTGCGATG 59.490 41.667 13.30 13.30 39.15 3.84
1688 2921 1.026584 TCTTCAAGGTGACGTCGACA 58.973 50.000 17.16 0.00 0.00 4.35
1749 2982 2.235891 TCAAGAGGCTAGTCAACGACA 58.764 47.619 0.00 0.00 34.60 4.35
1984 3510 2.359478 ATGGGAAACGTGGCGACC 60.359 61.111 0.00 0.00 0.00 4.79
2029 3555 0.607217 TGCAGATGCTTGGTGTGAGG 60.607 55.000 6.35 0.00 42.66 3.86
2452 4104 1.066858 TGTGAGAATCCCGACAAGAGC 60.067 52.381 0.00 0.00 0.00 4.09
2588 4240 6.974622 CGTATTTTTGGCAGAAGCTTGATTAT 59.025 34.615 2.10 0.00 41.70 1.28
2686 4338 9.174166 AGGTATTATTTTCGTCATGTTTAGCTT 57.826 29.630 0.00 0.00 0.00 3.74
2687 4339 9.783256 GGTATTATTTTCGTCATGTTTAGCTTT 57.217 29.630 0.00 0.00 0.00 3.51
2690 4342 9.783256 ATTATTTTCGTCATGTTTAGCTTTACC 57.217 29.630 0.00 0.00 0.00 2.85
2750 4402 7.624360 TCCAAATTGCTTAATGTCTCGTATT 57.376 32.000 0.00 0.00 0.00 1.89
2797 4611 8.625786 TGGTACAAAAGAGGGATAAAGTAAAC 57.374 34.615 0.00 0.00 31.92 2.01
2906 4724 5.945191 ACATGATGTCATACACATGGAACAA 59.055 36.000 14.29 0.00 46.53 2.83
2955 4783 9.594478 TGCTTAATTCGACTATACATTCTTGAA 57.406 29.630 0.00 0.00 0.00 2.69
3008 4836 8.868916 GTTTTTGCTTTGTCTGAAACTTTGATA 58.131 29.630 0.00 0.00 0.00 2.15
3017 4845 9.868277 TTGTCTGAAACTTTGATAATGTTGTTT 57.132 25.926 0.00 0.00 0.00 2.83
3051 4879 1.278238 GCCGTCGAACCAAGATACAG 58.722 55.000 0.00 0.00 0.00 2.74
3053 4881 2.259618 CCGTCGAACCAAGATACAGTG 58.740 52.381 0.00 0.00 0.00 3.66
3061 4889 5.333339 CGAACCAAGATACAGTGTTCACAAG 60.333 44.000 0.00 0.57 36.07 3.16
3166 4995 5.385198 TGGGCCTTGTCTATTTATCAATCC 58.615 41.667 4.53 0.00 0.00 3.01
3189 5018 9.799106 ATCCCTAATAATCTTGATACAAAGGTG 57.201 33.333 0.00 0.00 0.00 4.00
3191 5020 9.627123 CCCTAATAATCTTGATACAAAGGTGAA 57.373 33.333 0.00 0.00 0.00 3.18
3197 5026 6.801539 TCTTGATACAAAGGTGAACATCAC 57.198 37.500 1.88 1.88 46.23 3.06
3210 5039 6.017400 GTGAACATCACATCATGAAAAGGT 57.983 37.500 0.00 0.00 46.22 3.50
3211 5040 5.860182 GTGAACATCACATCATGAAAAGGTG 59.140 40.000 0.00 6.66 46.22 4.00
3212 5041 5.769162 TGAACATCACATCATGAAAAGGTGA 59.231 36.000 18.78 18.78 41.93 4.02
3213 5042 6.264970 TGAACATCACATCATGAAAAGGTGAA 59.735 34.615 19.76 6.99 41.93 3.18
3214 5043 6.263516 ACATCACATCATGAAAAGGTGAAG 57.736 37.500 19.76 18.17 41.93 3.02
3215 5044 4.771590 TCACATCATGAAAAGGTGAAGC 57.228 40.909 15.91 0.00 35.72 3.86
3216 5045 4.143543 TCACATCATGAAAAGGTGAAGCA 58.856 39.130 15.91 0.31 35.72 3.91
3217 5046 4.768448 TCACATCATGAAAAGGTGAAGCAT 59.232 37.500 15.91 0.00 35.72 3.79
3218 5047 5.945191 TCACATCATGAAAAGGTGAAGCATA 59.055 36.000 15.91 0.00 35.72 3.14
3219 5048 6.094464 TCACATCATGAAAAGGTGAAGCATAG 59.906 38.462 15.91 0.00 35.72 2.23
3220 5049 6.094464 CACATCATGAAAAGGTGAAGCATAGA 59.906 38.462 0.00 0.00 0.00 1.98
3251 5080 5.123344 TGAAGCTGAACATCACATCATGAAG 59.877 40.000 0.00 0.00 41.93 3.02
3351 5182 4.108336 GAGTAACGTTTCGGTATTCCTCC 58.892 47.826 5.91 0.00 31.26 4.30
3356 5187 5.702349 ACGTTTCGGTATTCCTCCTATAG 57.298 43.478 0.00 0.00 0.00 1.31
3407 5238 8.110860 GGGGGTTCAACAACTCATATATAATG 57.889 38.462 0.00 0.00 34.19 1.90
3408 5239 7.724061 GGGGGTTCAACAACTCATATATAATGT 59.276 37.037 0.00 0.00 34.19 2.71
3409 5240 9.131791 GGGGTTCAACAACTCATATATAATGTT 57.868 33.333 0.00 0.00 34.19 2.71
3411 5242 9.864034 GGTTCAACAACTCATATATAATGTTCG 57.136 33.333 0.00 0.00 32.50 3.95
3412 5243 9.370126 GTTCAACAACTCATATATAATGTTCGC 57.630 33.333 0.00 0.00 0.00 4.70
3413 5244 7.783209 TCAACAACTCATATATAATGTTCGCG 58.217 34.615 0.00 0.00 0.00 5.87
3414 5245 7.436970 TCAACAACTCATATATAATGTTCGCGT 59.563 33.333 5.77 0.00 0.00 6.01
3415 5246 8.696175 CAACAACTCATATATAATGTTCGCGTA 58.304 33.333 5.77 0.00 0.00 4.42
3416 5247 8.981724 ACAACTCATATATAATGTTCGCGTAT 57.018 30.769 5.77 0.00 0.00 3.06
3426 5257 5.450376 AATGTTCGCGTATAAGTCAGTTG 57.550 39.130 5.77 0.00 0.00 3.16
3427 5258 4.163458 TGTTCGCGTATAAGTCAGTTGA 57.837 40.909 5.77 0.00 0.00 3.18
3428 5259 4.740268 TGTTCGCGTATAAGTCAGTTGAT 58.260 39.130 5.77 0.00 0.00 2.57
3429 5260 4.796830 TGTTCGCGTATAAGTCAGTTGATC 59.203 41.667 5.77 0.00 0.00 2.92
3430 5261 4.625972 TCGCGTATAAGTCAGTTGATCA 57.374 40.909 5.77 0.00 0.00 2.92
3431 5262 5.183014 TCGCGTATAAGTCAGTTGATCAT 57.817 39.130 5.77 0.00 0.00 2.45
3432 5263 5.588240 TCGCGTATAAGTCAGTTGATCATT 58.412 37.500 5.77 0.00 0.00 2.57
3433 5264 6.040247 TCGCGTATAAGTCAGTTGATCATTT 58.960 36.000 5.77 0.00 0.00 2.32
3434 5265 6.533723 TCGCGTATAAGTCAGTTGATCATTTT 59.466 34.615 5.77 0.00 0.00 1.82
3435 5266 6.624917 CGCGTATAAGTCAGTTGATCATTTTG 59.375 38.462 0.00 0.00 0.00 2.44
3436 5267 6.907212 GCGTATAAGTCAGTTGATCATTTTGG 59.093 38.462 0.00 0.00 0.00 3.28
3437 5268 7.409697 CGTATAAGTCAGTTGATCATTTTGGG 58.590 38.462 0.00 0.00 0.00 4.12
3438 5269 4.525912 AAGTCAGTTGATCATTTTGGGC 57.474 40.909 0.00 0.00 0.00 5.36
3439 5270 2.827921 AGTCAGTTGATCATTTTGGGCC 59.172 45.455 0.00 0.00 0.00 5.80
3440 5271 2.562298 GTCAGTTGATCATTTTGGGCCA 59.438 45.455 0.00 0.00 0.00 5.36
3441 5272 3.006752 GTCAGTTGATCATTTTGGGCCAA 59.993 43.478 16.66 16.66 0.00 4.52
3442 5273 3.645212 TCAGTTGATCATTTTGGGCCAAA 59.355 39.130 27.28 27.28 0.00 3.28
3443 5274 3.747529 CAGTTGATCATTTTGGGCCAAAC 59.252 43.478 30.49 18.83 32.79 2.93
3444 5275 3.073678 GTTGATCATTTTGGGCCAAACC 58.926 45.455 30.49 16.79 32.79 3.27
3445 5276 2.333069 TGATCATTTTGGGCCAAACCA 58.667 42.857 30.49 18.08 42.05 3.67
3453 5284 1.859302 TGGGCCAAACCAATACATCC 58.141 50.000 2.13 0.00 42.05 3.51
3454 5285 1.077828 TGGGCCAAACCAATACATCCA 59.922 47.619 2.13 0.00 42.05 3.41
3455 5286 1.480545 GGGCCAAACCAATACATCCAC 59.519 52.381 4.39 0.00 42.05 4.02
3456 5287 2.175202 GGCCAAACCAATACATCCACA 58.825 47.619 0.00 0.00 38.86 4.17
3457 5288 2.765699 GGCCAAACCAATACATCCACAT 59.234 45.455 0.00 0.00 38.86 3.21
3458 5289 3.181476 GGCCAAACCAATACATCCACATC 60.181 47.826 0.00 0.00 38.86 3.06
3459 5290 3.446873 GCCAAACCAATACATCCACATCA 59.553 43.478 0.00 0.00 0.00 3.07
3460 5291 4.099881 GCCAAACCAATACATCCACATCAT 59.900 41.667 0.00 0.00 0.00 2.45
3461 5292 5.395546 GCCAAACCAATACATCCACATCATT 60.396 40.000 0.00 0.00 0.00 2.57
3462 5293 6.275335 CCAAACCAATACATCCACATCATTC 58.725 40.000 0.00 0.00 0.00 2.67
3463 5294 6.127394 CCAAACCAATACATCCACATCATTCA 60.127 38.462 0.00 0.00 0.00 2.57
3464 5295 6.704289 AACCAATACATCCACATCATTCAG 57.296 37.500 0.00 0.00 0.00 3.02
3465 5296 4.581824 ACCAATACATCCACATCATTCAGC 59.418 41.667 0.00 0.00 0.00 4.26
3466 5297 4.022589 CCAATACATCCACATCATTCAGCC 60.023 45.833 0.00 0.00 0.00 4.85
3467 5298 2.812836 ACATCCACATCATTCAGCCA 57.187 45.000 0.00 0.00 0.00 4.75
3468 5299 2.651455 ACATCCACATCATTCAGCCAG 58.349 47.619 0.00 0.00 0.00 4.85
3469 5300 2.240414 ACATCCACATCATTCAGCCAGA 59.760 45.455 0.00 0.00 0.00 3.86
3470 5301 3.284617 CATCCACATCATTCAGCCAGAA 58.715 45.455 0.00 0.00 41.28 3.02
3471 5302 3.438216 TCCACATCATTCAGCCAGAAA 57.562 42.857 0.00 0.00 40.22 2.52
3472 5303 3.765381 TCCACATCATTCAGCCAGAAAA 58.235 40.909 0.00 0.00 40.22 2.29
3473 5304 4.346730 TCCACATCATTCAGCCAGAAAAT 58.653 39.130 0.00 0.00 40.22 1.82
3474 5305 5.508567 TCCACATCATTCAGCCAGAAAATA 58.491 37.500 0.00 0.00 40.22 1.40
3475 5306 5.951148 TCCACATCATTCAGCCAGAAAATAA 59.049 36.000 0.00 0.00 40.22 1.40
3476 5307 6.436847 TCCACATCATTCAGCCAGAAAATAAA 59.563 34.615 0.00 0.00 40.22 1.40
3477 5308 7.039152 TCCACATCATTCAGCCAGAAAATAAAA 60.039 33.333 0.00 0.00 40.22 1.52
3478 5309 7.603404 CCACATCATTCAGCCAGAAAATAAAAA 59.397 33.333 0.00 0.00 40.22 1.94
3479 5310 9.158233 CACATCATTCAGCCAGAAAATAAAAAT 57.842 29.630 0.00 0.00 40.22 1.82
3511 5342 2.671130 CACTTTTTGCACCTGGTGTT 57.329 45.000 26.48 1.79 35.75 3.32
3512 5343 2.971307 CACTTTTTGCACCTGGTGTTT 58.029 42.857 26.48 2.45 35.75 2.83
3513 5344 4.116747 CACTTTTTGCACCTGGTGTTTA 57.883 40.909 26.48 11.85 35.75 2.01
3514 5345 4.499183 CACTTTTTGCACCTGGTGTTTAA 58.501 39.130 26.48 16.59 35.75 1.52
3515 5346 4.566360 CACTTTTTGCACCTGGTGTTTAAG 59.434 41.667 26.48 23.02 35.75 1.85
3516 5347 4.464597 ACTTTTTGCACCTGGTGTTTAAGA 59.535 37.500 26.48 12.66 35.75 2.10
3517 5348 5.128663 ACTTTTTGCACCTGGTGTTTAAGAT 59.871 36.000 26.48 12.63 35.75 2.40
3518 5349 5.606348 TTTTGCACCTGGTGTTTAAGATT 57.394 34.783 26.48 0.00 35.75 2.40
3519 5350 4.846779 TTGCACCTGGTGTTTAAGATTC 57.153 40.909 26.48 8.33 35.75 2.52
3520 5351 3.153919 TGCACCTGGTGTTTAAGATTCC 58.846 45.455 26.48 7.63 35.75 3.01
3521 5352 3.181434 TGCACCTGGTGTTTAAGATTCCT 60.181 43.478 26.48 0.00 35.75 3.36
3522 5353 3.191371 GCACCTGGTGTTTAAGATTCCTG 59.809 47.826 26.48 0.00 35.75 3.86
3523 5354 4.398319 CACCTGGTGTTTAAGATTCCTGT 58.602 43.478 18.76 0.00 0.00 4.00
3524 5355 4.216257 CACCTGGTGTTTAAGATTCCTGTG 59.784 45.833 18.76 0.00 0.00 3.66
3525 5356 3.758554 CCTGGTGTTTAAGATTCCTGTGG 59.241 47.826 0.00 0.00 0.00 4.17
3526 5357 3.153919 TGGTGTTTAAGATTCCTGTGGC 58.846 45.455 0.00 0.00 0.00 5.01
3527 5358 2.161609 GGTGTTTAAGATTCCTGTGGCG 59.838 50.000 0.00 0.00 0.00 5.69
3528 5359 2.161609 GTGTTTAAGATTCCTGTGGCGG 59.838 50.000 0.00 0.00 0.00 6.13
3529 5360 1.743394 GTTTAAGATTCCTGTGGCGGG 59.257 52.381 0.00 0.00 0.00 6.13
3530 5361 0.393808 TTAAGATTCCTGTGGCGGGC 60.394 55.000 0.00 0.00 0.00 6.13
3531 5362 2.587322 TAAGATTCCTGTGGCGGGCG 62.587 60.000 0.00 0.00 0.00 6.13
3532 5363 4.467084 GATTCCTGTGGCGGGCGA 62.467 66.667 0.00 0.00 0.00 5.54
3533 5364 3.757248 GATTCCTGTGGCGGGCGAT 62.757 63.158 0.00 0.00 0.00 4.58
3534 5365 3.757248 ATTCCTGTGGCGGGCGATC 62.757 63.158 0.00 0.00 0.00 3.69
3537 5368 4.812476 CTGTGGCGGGCGATCGAA 62.812 66.667 21.57 0.00 0.00 3.71
3538 5369 4.155733 TGTGGCGGGCGATCGAAT 62.156 61.111 21.57 0.00 0.00 3.34
3539 5370 2.028484 GTGGCGGGCGATCGAATA 59.972 61.111 21.57 0.00 0.00 1.75
3540 5371 1.593209 GTGGCGGGCGATCGAATAA 60.593 57.895 21.57 0.00 0.00 1.40
3541 5372 1.144276 TGGCGGGCGATCGAATAAA 59.856 52.632 21.57 0.00 0.00 1.40
3542 5373 1.155424 TGGCGGGCGATCGAATAAAC 61.155 55.000 21.57 4.25 0.00 2.01
3543 5374 1.155424 GGCGGGCGATCGAATAAACA 61.155 55.000 21.57 0.00 0.00 2.83
3544 5375 0.865769 GCGGGCGATCGAATAAACAT 59.134 50.000 21.57 0.00 0.00 2.71
3545 5376 1.398451 GCGGGCGATCGAATAAACATG 60.398 52.381 21.57 0.00 0.00 3.21
3546 5377 1.194547 CGGGCGATCGAATAAACATGG 59.805 52.381 21.57 0.00 0.00 3.66
3547 5378 1.069227 GGGCGATCGAATAAACATGGC 60.069 52.381 21.57 0.00 0.00 4.40
3548 5379 1.601903 GGCGATCGAATAAACATGGCA 59.398 47.619 21.57 0.00 0.00 4.92
3549 5380 2.349817 GGCGATCGAATAAACATGGCAG 60.350 50.000 21.57 0.00 0.00 4.85
3550 5381 2.908634 CGATCGAATAAACATGGCAGC 58.091 47.619 10.26 0.00 0.00 5.25
3551 5382 2.287644 CGATCGAATAAACATGGCAGCA 59.712 45.455 10.26 0.00 0.00 4.41
3552 5383 3.605461 CGATCGAATAAACATGGCAGCAG 60.605 47.826 10.26 0.00 0.00 4.24
3553 5384 2.984562 TCGAATAAACATGGCAGCAGA 58.015 42.857 0.00 0.00 0.00 4.26
3554 5385 3.342719 TCGAATAAACATGGCAGCAGAA 58.657 40.909 0.00 0.00 0.00 3.02
3555 5386 3.126858 TCGAATAAACATGGCAGCAGAAC 59.873 43.478 0.00 0.00 0.00 3.01
3556 5387 3.119884 CGAATAAACATGGCAGCAGAACA 60.120 43.478 0.00 0.00 0.00 3.18
3557 5388 4.615682 CGAATAAACATGGCAGCAGAACAA 60.616 41.667 0.00 0.00 0.00 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
86 87 2.594303 CTTCAACCGGGCACTGCA 60.594 61.111 6.32 0.00 0.00 4.41
131 133 5.474876 AGAAAAAGCTTCAACTGTATCTGGG 59.525 40.000 0.00 0.00 0.00 4.45
167 170 0.953471 AACCATGCTCGCGTTTGCTA 60.953 50.000 5.77 1.58 39.65 3.49
221 224 2.177531 CATCTTGCACACAGCCGC 59.822 61.111 0.00 0.00 44.83 6.53
286 289 2.224159 AAGGGGCATGGTGTCGAGT 61.224 57.895 0.00 0.00 0.00 4.18
345 348 3.214123 CCGCCATGGCCTCACATG 61.214 66.667 30.79 14.53 46.02 3.21
346 349 4.511246 CCCGCCATGGCCTCACAT 62.511 66.667 30.79 0.00 37.98 3.21
372 375 2.266055 GAGGACGTTGCTCCCCAG 59.734 66.667 0.00 0.00 0.00 4.45
387 390 2.035704 CCGAACATCCTCATCTCCAGAG 59.964 54.545 0.00 0.00 0.00 3.35
388 391 2.034878 CCGAACATCCTCATCTCCAGA 58.965 52.381 0.00 0.00 0.00 3.86
389 392 1.539929 GCCGAACATCCTCATCTCCAG 60.540 57.143 0.00 0.00 0.00 3.86
390 393 0.465705 GCCGAACATCCTCATCTCCA 59.534 55.000 0.00 0.00 0.00 3.86
391 394 0.465705 TGCCGAACATCCTCATCTCC 59.534 55.000 0.00 0.00 0.00 3.71
432 435 1.153289 CCCTTCCACTCTCATGCCG 60.153 63.158 0.00 0.00 0.00 5.69
435 438 1.871418 TCTCCCCTTCCACTCTCATG 58.129 55.000 0.00 0.00 0.00 3.07
436 439 2.776536 CAATCTCCCCTTCCACTCTCAT 59.223 50.000 0.00 0.00 0.00 2.90
437 440 2.191400 CAATCTCCCCTTCCACTCTCA 58.809 52.381 0.00 0.00 0.00 3.27
456 459 2.125912 GCCTCGCGCTCTTCTTCA 60.126 61.111 5.56 0.00 0.00 3.02
458 461 3.023949 ATGGCCTCGCGCTCTTCTT 62.024 57.895 5.56 0.00 37.74 2.52
524 527 7.044496 TCCTTTCTTATCCTCTTCCCAAAAT 57.956 36.000 0.00 0.00 0.00 1.82
525 528 6.463053 TCCTTTCTTATCCTCTTCCCAAAA 57.537 37.500 0.00 0.00 0.00 2.44
549 552 2.359850 GCCCACGCACATCCTTCA 60.360 61.111 0.00 0.00 34.03 3.02
583 586 3.223589 ACCCACCAACGCCAAAGC 61.224 61.111 0.00 0.00 0.00 3.51
584 587 0.820074 TACACCCACCAACGCCAAAG 60.820 55.000 0.00 0.00 0.00 2.77
585 588 0.820074 CTACACCCACCAACGCCAAA 60.820 55.000 0.00 0.00 0.00 3.28
586 589 1.228003 CTACACCCACCAACGCCAA 60.228 57.895 0.00 0.00 0.00 4.52
587 590 2.428187 CTACACCCACCAACGCCA 59.572 61.111 0.00 0.00 0.00 5.69
588 591 3.053896 GCTACACCCACCAACGCC 61.054 66.667 0.00 0.00 0.00 5.68
589 592 3.419759 CGCTACACCCACCAACGC 61.420 66.667 0.00 0.00 0.00 4.84
590 593 3.419759 GCGCTACACCCACCAACG 61.420 66.667 0.00 0.00 0.00 4.10
591 594 2.281208 TGCGCTACACCCACCAAC 60.281 61.111 9.73 0.00 0.00 3.77
592 595 2.031919 CTGCGCTACACCCACCAA 59.968 61.111 9.73 0.00 0.00 3.67
593 596 4.697756 GCTGCGCTACACCCACCA 62.698 66.667 9.73 0.00 0.00 4.17
611 614 1.127225 GTAAACGTCGCTCACACGC 59.873 57.895 0.00 0.00 41.10 5.34
612 615 0.662374 AGGTAAACGTCGCTCACACG 60.662 55.000 0.00 0.00 43.13 4.49
613 616 2.336554 TAGGTAAACGTCGCTCACAC 57.663 50.000 0.00 0.00 0.00 3.82
614 617 4.700268 TTATAGGTAAACGTCGCTCACA 57.300 40.909 0.00 0.00 0.00 3.58
615 618 7.684062 TTTATTATAGGTAAACGTCGCTCAC 57.316 36.000 0.00 0.00 0.00 3.51
640 643 9.729281 TGCATGATGCTATTCTTAATCTTCATA 57.271 29.630 19.19 0.00 45.31 2.15
641 644 8.631480 TGCATGATGCTATTCTTAATCTTCAT 57.369 30.769 19.19 0.00 45.31 2.57
642 645 8.512138 CATGCATGATGCTATTCTTAATCTTCA 58.488 33.333 22.59 0.00 45.31 3.02
643 646 7.968956 CCATGCATGATGCTATTCTTAATCTTC 59.031 37.037 28.31 0.00 45.31 2.87
644 647 7.668469 TCCATGCATGATGCTATTCTTAATCTT 59.332 33.333 28.31 0.00 45.31 2.40
645 648 7.120873 GTCCATGCATGATGCTATTCTTAATCT 59.879 37.037 28.31 0.00 45.31 2.40
646 649 7.094506 TGTCCATGCATGATGCTATTCTTAATC 60.095 37.037 28.31 0.33 45.31 1.75
647 650 6.717997 TGTCCATGCATGATGCTATTCTTAAT 59.282 34.615 28.31 0.00 45.31 1.40
648 651 6.063404 TGTCCATGCATGATGCTATTCTTAA 58.937 36.000 28.31 0.00 45.31 1.85
649 652 5.623169 TGTCCATGCATGATGCTATTCTTA 58.377 37.500 28.31 0.00 45.31 2.10
650 653 4.466827 TGTCCATGCATGATGCTATTCTT 58.533 39.130 28.31 0.00 45.31 2.52
651 654 4.094830 TGTCCATGCATGATGCTATTCT 57.905 40.909 28.31 0.00 45.31 2.40
652 655 4.217767 ACATGTCCATGCATGATGCTATTC 59.782 41.667 28.31 8.84 46.65 1.75
653 656 4.149598 ACATGTCCATGCATGATGCTATT 58.850 39.130 28.31 5.23 46.65 1.73
654 657 3.763057 ACATGTCCATGCATGATGCTAT 58.237 40.909 28.31 11.36 46.65 2.97
655 658 3.217681 ACATGTCCATGCATGATGCTA 57.782 42.857 28.31 9.58 46.65 3.49
656 659 2.067365 ACATGTCCATGCATGATGCT 57.933 45.000 28.31 11.06 46.65 3.79
657 660 4.514781 AATACATGTCCATGCATGATGC 57.485 40.909 28.31 11.12 46.65 3.91
658 661 7.806487 GTCTAAAATACATGTCCATGCATGATG 59.194 37.037 28.31 23.36 46.65 3.07
659 662 7.308169 CGTCTAAAATACATGTCCATGCATGAT 60.308 37.037 28.31 10.88 46.65 2.45
660 663 6.018016 CGTCTAAAATACATGTCCATGCATGA 60.018 38.462 28.31 8.76 46.65 3.07
662 665 5.277974 GCGTCTAAAATACATGTCCATGCAT 60.278 40.000 0.00 0.00 42.39 3.96
663 666 4.035091 GCGTCTAAAATACATGTCCATGCA 59.965 41.667 0.00 0.00 42.39 3.96
664 667 4.527564 GCGTCTAAAATACATGTCCATGC 58.472 43.478 0.00 0.00 42.39 4.06
665 668 4.574421 TGGCGTCTAAAATACATGTCCATG 59.426 41.667 0.00 5.74 44.15 3.66
666 669 4.574828 GTGGCGTCTAAAATACATGTCCAT 59.425 41.667 0.00 0.00 0.00 3.41
667 670 3.936453 GTGGCGTCTAAAATACATGTCCA 59.064 43.478 0.00 0.00 0.00 4.02
668 671 3.936453 TGTGGCGTCTAAAATACATGTCC 59.064 43.478 0.00 0.00 0.00 4.02
669 672 5.539582 TTGTGGCGTCTAAAATACATGTC 57.460 39.130 0.00 0.00 0.00 3.06
670 673 5.950758 TTTGTGGCGTCTAAAATACATGT 57.049 34.783 2.69 2.69 0.00 3.21
671 674 5.799936 CCTTTTGTGGCGTCTAAAATACATG 59.200 40.000 3.84 0.00 0.00 3.21
672 675 5.475564 ACCTTTTGTGGCGTCTAAAATACAT 59.524 36.000 3.84 0.00 0.00 2.29
673 676 4.822896 ACCTTTTGTGGCGTCTAAAATACA 59.177 37.500 3.84 0.00 0.00 2.29
674 677 5.049267 TGACCTTTTGTGGCGTCTAAAATAC 60.049 40.000 3.84 1.28 0.00 1.89
675 678 5.064558 TGACCTTTTGTGGCGTCTAAAATA 58.935 37.500 3.84 0.00 0.00 1.40
676 679 3.886505 TGACCTTTTGTGGCGTCTAAAAT 59.113 39.130 3.84 0.00 0.00 1.82
677 680 3.280295 TGACCTTTTGTGGCGTCTAAAA 58.720 40.909 0.00 0.00 0.00 1.52
678 681 2.920524 TGACCTTTTGTGGCGTCTAAA 58.079 42.857 0.00 0.00 0.00 1.85
679 682 2.623878 TGACCTTTTGTGGCGTCTAA 57.376 45.000 0.00 0.00 0.00 2.10
680 683 2.623878 TTGACCTTTTGTGGCGTCTA 57.376 45.000 0.00 0.00 0.00 2.59
681 684 1.676006 CTTTGACCTTTTGTGGCGTCT 59.324 47.619 0.00 0.00 0.00 4.18
682 685 1.269051 CCTTTGACCTTTTGTGGCGTC 60.269 52.381 0.00 0.00 0.00 5.19
683 686 0.744281 CCTTTGACCTTTTGTGGCGT 59.256 50.000 0.00 0.00 0.00 5.68
684 687 0.031994 CCCTTTGACCTTTTGTGGCG 59.968 55.000 0.00 0.00 0.00 5.69
685 688 1.341209 CTCCCTTTGACCTTTTGTGGC 59.659 52.381 0.00 0.00 0.00 5.01
686 689 1.341209 GCTCCCTTTGACCTTTTGTGG 59.659 52.381 0.00 0.00 0.00 4.17
687 690 1.001378 CGCTCCCTTTGACCTTTTGTG 60.001 52.381 0.00 0.00 0.00 3.33
688 691 1.318576 CGCTCCCTTTGACCTTTTGT 58.681 50.000 0.00 0.00 0.00 2.83
689 692 0.598065 CCGCTCCCTTTGACCTTTTG 59.402 55.000 0.00 0.00 0.00 2.44
690 693 0.185175 ACCGCTCCCTTTGACCTTTT 59.815 50.000 0.00 0.00 0.00 2.27
691 694 1.003233 CTACCGCTCCCTTTGACCTTT 59.997 52.381 0.00 0.00 0.00 3.11
692 695 0.613777 CTACCGCTCCCTTTGACCTT 59.386 55.000 0.00 0.00 0.00 3.50
693 696 1.265454 CCTACCGCTCCCTTTGACCT 61.265 60.000 0.00 0.00 0.00 3.85
694 697 1.221021 CCTACCGCTCCCTTTGACC 59.779 63.158 0.00 0.00 0.00 4.02
695 698 1.188863 TACCTACCGCTCCCTTTGAC 58.811 55.000 0.00 0.00 0.00 3.18
696 699 1.941377 TTACCTACCGCTCCCTTTGA 58.059 50.000 0.00 0.00 0.00 2.69
697 700 2.027469 AGTTTACCTACCGCTCCCTTTG 60.027 50.000 0.00 0.00 0.00 2.77
698 701 2.263545 AGTTTACCTACCGCTCCCTTT 58.736 47.619 0.00 0.00 0.00 3.11
699 702 1.948391 AGTTTACCTACCGCTCCCTT 58.052 50.000 0.00 0.00 0.00 3.95
700 703 1.553704 CAAGTTTACCTACCGCTCCCT 59.446 52.381 0.00 0.00 0.00 4.20
701 704 1.551883 TCAAGTTTACCTACCGCTCCC 59.448 52.381 0.00 0.00 0.00 4.30
702 705 3.323751 TTCAAGTTTACCTACCGCTCC 57.676 47.619 0.00 0.00 0.00 4.70
703 706 3.869832 GGATTCAAGTTTACCTACCGCTC 59.130 47.826 0.00 0.00 0.00 5.03
704 707 3.518303 AGGATTCAAGTTTACCTACCGCT 59.482 43.478 0.00 0.00 0.00 5.52
705 708 3.869832 GAGGATTCAAGTTTACCTACCGC 59.130 47.826 0.00 0.00 0.00 5.68
706 709 4.110482 CGAGGATTCAAGTTTACCTACCG 58.890 47.826 0.00 0.00 0.00 4.02
707 710 5.082251 ACGAGGATTCAAGTTTACCTACC 57.918 43.478 0.00 0.00 0.00 3.18
708 711 5.741040 CGTACGAGGATTCAAGTTTACCTAC 59.259 44.000 10.44 0.00 0.00 3.18
709 712 5.415701 ACGTACGAGGATTCAAGTTTACCTA 59.584 40.000 24.41 0.00 0.00 3.08
710 713 4.219288 ACGTACGAGGATTCAAGTTTACCT 59.781 41.667 24.41 0.00 0.00 3.08
711 714 4.488879 ACGTACGAGGATTCAAGTTTACC 58.511 43.478 24.41 0.00 0.00 2.85
712 715 4.560427 GGACGTACGAGGATTCAAGTTTAC 59.440 45.833 24.41 0.00 0.00 2.01
713 716 4.218200 TGGACGTACGAGGATTCAAGTTTA 59.782 41.667 24.41 0.00 0.00 2.01
714 717 3.006110 TGGACGTACGAGGATTCAAGTTT 59.994 43.478 24.41 0.00 0.00 2.66
715 718 2.559668 TGGACGTACGAGGATTCAAGTT 59.440 45.455 24.41 0.00 0.00 2.66
716 719 2.163815 CTGGACGTACGAGGATTCAAGT 59.836 50.000 24.41 0.00 0.00 3.16
717 720 2.479730 CCTGGACGTACGAGGATTCAAG 60.480 54.545 24.41 11.11 45.50 3.02
718 721 1.475280 CCTGGACGTACGAGGATTCAA 59.525 52.381 24.41 0.47 45.50 2.69
719 722 1.100510 CCTGGACGTACGAGGATTCA 58.899 55.000 24.41 3.03 45.50 2.57
720 723 1.101331 ACCTGGACGTACGAGGATTC 58.899 55.000 24.41 8.36 45.50 2.52
721 724 0.815734 CACCTGGACGTACGAGGATT 59.184 55.000 24.41 0.00 45.50 3.01
722 725 1.035932 CCACCTGGACGTACGAGGAT 61.036 60.000 24.41 6.52 45.50 3.24
723 726 1.676635 CCACCTGGACGTACGAGGA 60.677 63.158 24.41 3.44 45.50 3.71
725 728 0.731417 CTACCACCTGGACGTACGAG 59.269 60.000 24.41 8.99 38.94 4.18
726 729 0.677731 CCTACCACCTGGACGTACGA 60.678 60.000 24.41 0.00 38.94 3.43
727 730 0.677731 TCCTACCACCTGGACGTACG 60.678 60.000 15.01 15.01 38.94 3.67
728 731 1.772836 ATCCTACCACCTGGACGTAC 58.227 55.000 0.00 0.00 38.94 3.67
729 732 2.381911 GAATCCTACCACCTGGACGTA 58.618 52.381 0.00 0.00 38.94 3.57
730 733 1.192428 GAATCCTACCACCTGGACGT 58.808 55.000 0.00 0.00 38.94 4.34
731 734 0.102481 CGAATCCTACCACCTGGACG 59.898 60.000 0.00 0.00 38.94 4.79
732 735 1.136500 GTCGAATCCTACCACCTGGAC 59.864 57.143 0.00 0.00 38.94 4.02
733 736 1.006758 AGTCGAATCCTACCACCTGGA 59.993 52.381 0.00 0.00 38.94 3.86
734 737 1.486211 AGTCGAATCCTACCACCTGG 58.514 55.000 0.00 0.00 42.17 4.45
735 738 3.611766 AAAGTCGAATCCTACCACCTG 57.388 47.619 0.00 0.00 0.00 4.00
736 739 3.581332 TCAAAAGTCGAATCCTACCACCT 59.419 43.478 0.00 0.00 0.00 4.00
737 740 3.934068 TCAAAAGTCGAATCCTACCACC 58.066 45.455 0.00 0.00 0.00 4.61
738 741 4.995487 ACTTCAAAAGTCGAATCCTACCAC 59.005 41.667 0.00 0.00 37.02 4.16
739 742 5.223449 ACTTCAAAAGTCGAATCCTACCA 57.777 39.130 0.00 0.00 37.02 3.25
740 743 7.662604 TTAACTTCAAAAGTCGAATCCTACC 57.337 36.000 0.00 0.00 41.91 3.18
741 744 8.553696 TGTTTAACTTCAAAAGTCGAATCCTAC 58.446 33.333 0.00 0.00 41.91 3.18
742 745 8.665643 TGTTTAACTTCAAAAGTCGAATCCTA 57.334 30.769 0.00 0.00 41.91 2.94
743 746 7.562454 TGTTTAACTTCAAAAGTCGAATCCT 57.438 32.000 0.00 0.00 41.91 3.24
744 747 8.126700 TCTTGTTTAACTTCAAAAGTCGAATCC 58.873 33.333 0.00 0.00 41.91 3.01
745 748 9.159470 CTCTTGTTTAACTTCAAAAGTCGAATC 57.841 33.333 0.00 0.00 41.91 2.52
746 749 8.674607 ACTCTTGTTTAACTTCAAAAGTCGAAT 58.325 29.630 0.00 0.00 41.91 3.34
747 750 8.036273 ACTCTTGTTTAACTTCAAAAGTCGAA 57.964 30.769 0.00 0.00 41.91 3.71
748 751 7.201582 GGACTCTTGTTTAACTTCAAAAGTCGA 60.202 37.037 11.26 0.00 40.43 4.20
749 752 6.905609 GGACTCTTGTTTAACTTCAAAAGTCG 59.094 38.462 11.26 0.00 40.43 4.18
750 753 7.148137 TGGGACTCTTGTTTAACTTCAAAAGTC 60.148 37.037 10.01 10.01 41.91 3.01
751 754 6.661805 TGGGACTCTTGTTTAACTTCAAAAGT 59.338 34.615 0.00 0.00 45.46 2.66
752 755 7.095695 TGGGACTCTTGTTTAACTTCAAAAG 57.904 36.000 0.00 0.00 0.00 2.27
753 756 7.417342 CCATGGGACTCTTGTTTAACTTCAAAA 60.417 37.037 2.85 0.00 0.00 2.44
754 757 6.040391 CCATGGGACTCTTGTTTAACTTCAAA 59.960 38.462 2.85 0.00 0.00 2.69
755 758 5.534654 CCATGGGACTCTTGTTTAACTTCAA 59.465 40.000 2.85 0.00 0.00 2.69
756 759 5.070001 CCATGGGACTCTTGTTTAACTTCA 58.930 41.667 2.85 0.00 0.00 3.02
757 760 5.070685 ACCATGGGACTCTTGTTTAACTTC 58.929 41.667 18.09 0.00 0.00 3.01
758 761 5.061721 ACCATGGGACTCTTGTTTAACTT 57.938 39.130 18.09 0.00 0.00 2.66
759 762 4.506802 GGACCATGGGACTCTTGTTTAACT 60.507 45.833 18.09 0.00 0.00 2.24
760 763 3.756963 GGACCATGGGACTCTTGTTTAAC 59.243 47.826 18.09 0.00 0.00 2.01
761 764 3.655777 AGGACCATGGGACTCTTGTTTAA 59.344 43.478 18.09 0.00 0.00 1.52
762 765 3.256704 AGGACCATGGGACTCTTGTTTA 58.743 45.455 18.09 0.00 0.00 2.01
763 766 2.040412 GAGGACCATGGGACTCTTGTTT 59.960 50.000 23.33 0.00 31.47 2.83
764 767 1.630878 GAGGACCATGGGACTCTTGTT 59.369 52.381 23.33 0.00 31.47 2.83
765 768 1.280457 GAGGACCATGGGACTCTTGT 58.720 55.000 23.33 0.00 31.47 3.16
766 769 0.543749 GGAGGACCATGGGACTCTTG 59.456 60.000 27.03 0.00 33.41 3.02
767 770 0.119155 TGGAGGACCATGGGACTCTT 59.881 55.000 27.03 10.69 41.77 2.85
768 771 0.326048 CTGGAGGACCATGGGACTCT 60.326 60.000 27.03 15.11 45.87 3.24
769 772 1.341156 CCTGGAGGACCATGGGACTC 61.341 65.000 22.83 22.83 45.87 3.36
770 773 1.307343 CCTGGAGGACCATGGGACT 60.307 63.158 18.09 13.59 45.87 3.85
771 774 1.616628 ACCTGGAGGACCATGGGAC 60.617 63.158 18.09 8.35 45.87 4.46
772 775 1.616327 CACCTGGAGGACCATGGGA 60.616 63.158 18.09 0.00 45.87 4.37
773 776 1.616327 TCACCTGGAGGACCATGGG 60.616 63.158 18.09 0.00 45.87 4.00
774 777 0.618680 TCTCACCTGGAGGACCATGG 60.619 60.000 11.19 11.19 45.87 3.66
775 778 0.829333 CTCTCACCTGGAGGACCATG 59.171 60.000 0.00 0.00 45.87 3.66
776 779 0.980231 GCTCTCACCTGGAGGACCAT 60.980 60.000 0.00 0.00 45.87 3.55
777 780 1.610673 GCTCTCACCTGGAGGACCA 60.611 63.158 0.00 0.00 44.19 4.02
778 781 2.716017 CGCTCTCACCTGGAGGACC 61.716 68.421 0.00 0.00 44.19 4.46
779 782 1.662438 CTCGCTCTCACCTGGAGGAC 61.662 65.000 0.00 0.00 44.19 3.85
780 783 1.379176 CTCGCTCTCACCTGGAGGA 60.379 63.158 0.00 0.00 44.19 3.71
781 784 1.379176 TCTCGCTCTCACCTGGAGG 60.379 63.158 0.00 0.00 44.19 4.30
782 785 0.393673 TCTCTCGCTCTCACCTGGAG 60.394 60.000 0.00 0.00 45.49 3.86
783 786 0.257328 ATCTCTCGCTCTCACCTGGA 59.743 55.000 0.00 0.00 0.00 3.86
784 787 0.667993 GATCTCTCGCTCTCACCTGG 59.332 60.000 0.00 0.00 0.00 4.45
785 788 1.387539 TGATCTCTCGCTCTCACCTG 58.612 55.000 0.00 0.00 0.00 4.00
786 789 2.136298 TTGATCTCTCGCTCTCACCT 57.864 50.000 0.00 0.00 0.00 4.00
787 790 3.122297 CAATTGATCTCTCGCTCTCACC 58.878 50.000 0.00 0.00 0.00 4.02
788 791 3.122297 CCAATTGATCTCTCGCTCTCAC 58.878 50.000 7.12 0.00 0.00 3.51
789 792 2.102084 CCCAATTGATCTCTCGCTCTCA 59.898 50.000 7.12 0.00 0.00 3.27
790 793 2.102252 ACCCAATTGATCTCTCGCTCTC 59.898 50.000 7.12 0.00 0.00 3.20
791 794 2.114616 ACCCAATTGATCTCTCGCTCT 58.885 47.619 7.12 0.00 0.00 4.09
792 795 2.611225 ACCCAATTGATCTCTCGCTC 57.389 50.000 7.12 0.00 0.00 5.03
793 796 2.224161 GCTACCCAATTGATCTCTCGCT 60.224 50.000 7.12 0.00 0.00 4.93
794 797 2.139118 GCTACCCAATTGATCTCTCGC 58.861 52.381 7.12 0.00 0.00 5.03
795 798 3.742433 AGCTACCCAATTGATCTCTCG 57.258 47.619 7.12 0.00 0.00 4.04
796 799 4.562552 GCCTAGCTACCCAATTGATCTCTC 60.563 50.000 7.12 0.00 0.00 3.20
797 800 3.326297 GCCTAGCTACCCAATTGATCTCT 59.674 47.826 7.12 0.14 0.00 3.10
798 801 3.326297 AGCCTAGCTACCCAATTGATCTC 59.674 47.826 7.12 0.00 36.99 2.75
799 802 3.321950 AGCCTAGCTACCCAATTGATCT 58.678 45.455 7.12 0.00 36.99 2.75
800 803 3.778954 AGCCTAGCTACCCAATTGATC 57.221 47.619 7.12 0.00 36.99 2.92
801 804 4.235372 ACTAGCCTAGCTACCCAATTGAT 58.765 43.478 7.12 0.00 40.44 2.57
802 805 3.654273 ACTAGCCTAGCTACCCAATTGA 58.346 45.455 7.12 0.00 40.44 2.57
803 806 4.423625 AACTAGCCTAGCTACCCAATTG 57.576 45.455 0.00 0.00 40.44 2.32
804 807 6.570654 TTAAACTAGCCTAGCTACCCAATT 57.429 37.500 0.00 0.00 40.44 2.32
805 808 6.069847 TGTTTAAACTAGCCTAGCTACCCAAT 60.070 38.462 18.72 0.00 40.44 3.16
806 809 5.248934 TGTTTAAACTAGCCTAGCTACCCAA 59.751 40.000 18.72 0.00 40.44 4.12
807 810 4.778958 TGTTTAAACTAGCCTAGCTACCCA 59.221 41.667 18.72 0.00 40.44 4.51
808 811 5.349061 TGTTTAAACTAGCCTAGCTACCC 57.651 43.478 18.72 0.00 40.44 3.69
809 812 7.949434 TCTATGTTTAAACTAGCCTAGCTACC 58.051 38.462 18.72 0.00 40.44 3.18
810 813 8.631797 ACTCTATGTTTAAACTAGCCTAGCTAC 58.368 37.037 18.72 0.00 40.44 3.58
811 814 8.763984 ACTCTATGTTTAAACTAGCCTAGCTA 57.236 34.615 18.72 0.00 40.44 3.32
812 815 7.663043 ACTCTATGTTTAAACTAGCCTAGCT 57.337 36.000 18.72 0.00 43.41 3.32
813 816 8.411683 TGTACTCTATGTTTAAACTAGCCTAGC 58.588 37.037 18.72 5.48 0.00 3.42
816 819 8.422566 GGATGTACTCTATGTTTAAACTAGCCT 58.577 37.037 18.72 8.64 0.00 4.58
817 820 7.381678 CGGATGTACTCTATGTTTAAACTAGCC 59.618 40.741 18.72 10.62 0.00 3.93
818 821 8.133627 TCGGATGTACTCTATGTTTAAACTAGC 58.866 37.037 18.72 6.57 0.00 3.42
820 823 9.793252 GTTCGGATGTACTCTATGTTTAAACTA 57.207 33.333 18.72 6.44 0.00 2.24
821 824 8.529476 AGTTCGGATGTACTCTATGTTTAAACT 58.471 33.333 18.72 7.55 0.00 2.66
822 825 8.699283 AGTTCGGATGTACTCTATGTTTAAAC 57.301 34.615 11.54 11.54 0.00 2.01
825 828 8.790718 GGATAGTTCGGATGTACTCTATGTTTA 58.209 37.037 0.00 0.00 0.00 2.01
826 829 7.521748 CGGATAGTTCGGATGTACTCTATGTTT 60.522 40.741 0.00 0.00 0.00 2.83
827 830 6.072618 CGGATAGTTCGGATGTACTCTATGTT 60.073 42.308 0.00 0.00 0.00 2.71
828 831 5.411977 CGGATAGTTCGGATGTACTCTATGT 59.588 44.000 0.00 0.00 0.00 2.29
829 832 5.674068 GCGGATAGTTCGGATGTACTCTATG 60.674 48.000 0.00 0.00 0.00 2.23
830 833 4.395542 GCGGATAGTTCGGATGTACTCTAT 59.604 45.833 0.00 0.00 0.00 1.98
831 834 3.750130 GCGGATAGTTCGGATGTACTCTA 59.250 47.826 0.00 0.00 0.00 2.43
832 835 2.553172 GCGGATAGTTCGGATGTACTCT 59.447 50.000 0.00 0.00 0.00 3.24
833 836 2.664971 CGCGGATAGTTCGGATGTACTC 60.665 54.545 0.00 0.00 0.00 2.59
834 837 1.266175 CGCGGATAGTTCGGATGTACT 59.734 52.381 0.00 0.00 0.00 2.73
835 838 1.665161 CCGCGGATAGTTCGGATGTAC 60.665 57.143 24.07 0.00 45.53 2.90
836 839 0.594602 CCGCGGATAGTTCGGATGTA 59.405 55.000 24.07 0.00 45.53 2.29
837 840 1.362717 CCGCGGATAGTTCGGATGT 59.637 57.895 24.07 0.00 45.53 3.06
838 841 0.663568 GACCGCGGATAGTTCGGATG 60.664 60.000 35.90 0.00 45.53 3.51
839 842 1.658673 GACCGCGGATAGTTCGGAT 59.341 57.895 35.90 4.22 45.53 4.18
840 843 2.827051 CGACCGCGGATAGTTCGGA 61.827 63.158 35.90 0.00 45.53 4.55
851 854 0.643820 GAACTTCATAACCGACCGCG 59.356 55.000 0.00 0.00 37.24 6.46
852 855 1.392510 GTGAACTTCATAACCGACCGC 59.607 52.381 0.00 0.00 0.00 5.68
853 856 2.679450 TGTGAACTTCATAACCGACCG 58.321 47.619 0.00 0.00 0.00 4.79
854 857 4.092968 GTCATGTGAACTTCATAACCGACC 59.907 45.833 0.00 0.00 0.00 4.79
855 858 4.201589 CGTCATGTGAACTTCATAACCGAC 60.202 45.833 0.00 1.52 0.00 4.79
856 859 3.924073 CGTCATGTGAACTTCATAACCGA 59.076 43.478 0.00 0.00 0.00 4.69
869 872 1.104630 TATGGGCGTACGTCATGTGA 58.895 50.000 22.92 6.43 0.00 3.58
927 940 1.148867 GAGGAGGAGAGGATGGGATGA 59.851 57.143 0.00 0.00 0.00 2.92
934 947 1.725169 CGGAGGGAGGAGGAGAGGAT 61.725 65.000 0.00 0.00 0.00 3.24
986 1017 0.370273 CTTCATGTTGCTACGGTCGC 59.630 55.000 0.00 0.00 0.00 5.19
988 1019 1.661112 GAGCTTCATGTTGCTACGGTC 59.339 52.381 13.37 0.89 39.91 4.79
989 1020 1.676014 GGAGCTTCATGTTGCTACGGT 60.676 52.381 13.37 0.00 39.91 4.83
990 1021 1.009829 GGAGCTTCATGTTGCTACGG 58.990 55.000 13.37 0.00 39.91 4.02
991 1022 2.015736 AGGAGCTTCATGTTGCTACG 57.984 50.000 15.45 0.00 44.37 3.51
992 1023 2.680339 GGAAGGAGCTTCATGTTGCTAC 59.320 50.000 14.20 14.20 41.77 3.58
993 1024 2.677902 CGGAAGGAGCTTCATGTTGCTA 60.678 50.000 13.37 0.00 41.77 3.49
1021 1052 0.930726 AGGACGAGGAGGAGAAGGAT 59.069 55.000 0.00 0.00 0.00 3.24
1039 1070 1.860950 CGTACCATCGAATGCAAGGAG 59.139 52.381 0.00 0.00 0.00 3.69
1050 1081 3.427528 AGTTTATAATGCGCGTACCATCG 59.572 43.478 8.43 0.00 0.00 3.84
1093 1125 5.401972 CAGAGCATGAAGAACTCGATGATAC 59.598 44.000 0.00 0.00 35.56 2.24
1113 1170 0.036952 ATTCGTGGACACAGGCAGAG 60.037 55.000 3.12 0.00 32.69 3.35
1122 1179 3.257127 TCATGTCAGTACATTCGTGGACA 59.743 43.478 0.00 0.00 44.07 4.02
1145 1203 1.765314 GGCCTCCACATCTGTCAGTAT 59.235 52.381 0.00 0.00 0.00 2.12
1146 1204 1.195115 GGCCTCCACATCTGTCAGTA 58.805 55.000 0.00 0.00 0.00 2.74
1147 1205 1.557269 GGGCCTCCACATCTGTCAGT 61.557 60.000 0.84 0.00 0.00 3.41
1189 1264 2.881403 GCTGGACCACTGGTGATTTGAT 60.881 50.000 5.10 0.00 35.25 2.57
1192 1267 0.478072 TGCTGGACCACTGGTGATTT 59.522 50.000 5.10 0.00 35.25 2.17
1437 1536 3.292460 AGAGGGAGTACATGTCTAGCAC 58.708 50.000 0.00 0.00 0.00 4.40
1446 1545 8.431910 TCACTAAAGTTTTAGAGGGAGTACAT 57.568 34.615 16.33 0.00 42.05 2.29
1447 1546 7.844493 TCACTAAAGTTTTAGAGGGAGTACA 57.156 36.000 16.33 0.00 42.05 2.90
1448 1547 8.751242 AGATCACTAAAGTTTTAGAGGGAGTAC 58.249 37.037 16.33 0.00 42.05 2.73
1453 1552 8.870879 CGTTTAGATCACTAAAGTTTTAGAGGG 58.129 37.037 16.33 7.26 45.42 4.30
1454 1553 8.381387 GCGTTTAGATCACTAAAGTTTTAGAGG 58.619 37.037 16.33 9.20 45.42 3.69
1455 1554 9.141400 AGCGTTTAGATCACTAAAGTTTTAGAG 57.859 33.333 16.33 9.85 45.42 2.43
1457 1556 9.141400 AGAGCGTTTAGATCACTAAAGTTTTAG 57.859 33.333 9.50 9.50 45.42 1.85
1458 1557 9.485206 AAGAGCGTTTAGATCACTAAAGTTTTA 57.515 29.630 0.00 0.00 45.42 1.52
1459 1558 7.964604 AGAGCGTTTAGATCACTAAAGTTTT 57.035 32.000 0.00 0.00 45.42 2.43
1475 1574 9.530633 CCTCTGTAAACTAATATAAGAGCGTTT 57.469 33.333 0.00 0.00 0.00 3.60
1476 1575 8.142551 CCCTCTGTAAACTAATATAAGAGCGTT 58.857 37.037 0.00 0.00 0.00 4.84
1477 1576 7.504911 TCCCTCTGTAAACTAATATAAGAGCGT 59.495 37.037 0.00 0.00 0.00 5.07
1478 1577 7.883217 TCCCTCTGTAAACTAATATAAGAGCG 58.117 38.462 0.00 0.00 0.00 5.03
1479 1578 8.862085 ACTCCCTCTGTAAACTAATATAAGAGC 58.138 37.037 0.00 0.00 0.00 4.09
1490 1589 9.656323 TGTATAATGATACTCCCTCTGTAAACT 57.344 33.333 1.81 0.00 39.04 2.66
1543 2776 4.199310 TGCAAGGACAAGGCAATAGATAC 58.801 43.478 0.00 0.00 34.05 2.24
1632 2865 2.020131 CGAAGGTCATGCCAGATGC 58.980 57.895 8.58 0.00 40.61 3.91
1688 2921 2.048127 GTCGGCACCTTCTTCGCT 60.048 61.111 0.00 0.00 0.00 4.93
1749 2982 2.932622 GCTGTCGTGTGGAGATGACATT 60.933 50.000 0.00 0.00 40.32 2.71
1944 3470 2.916702 AATATCGAGCTGCATCCACA 57.083 45.000 1.02 0.00 0.00 4.17
1984 3510 3.763902 CGCCACATTATCTAGGATCTCG 58.236 50.000 0.00 0.00 0.00 4.04
2029 3555 8.613482 GGATGCAAGTTATTTACTAGAACCTTC 58.387 37.037 0.00 0.00 35.54 3.46
2183 3785 1.023502 GCGGAGTAGAGGTCCAGTAC 58.976 60.000 0.00 0.00 33.14 2.73
2452 4104 2.095161 GTGTGTCTCGTCCCAGTAGAAG 60.095 54.545 0.00 0.00 0.00 2.85
2588 4240 5.250200 AGATACGGCACCAAAACTATCAAA 58.750 37.500 0.00 0.00 0.00 2.69
2750 4402 1.270274 CTTGCTACAAAGTGCATGGCA 59.730 47.619 0.00 0.00 39.07 4.92
2797 4611 4.270084 GCATGCACATTTCCTGATGAATTG 59.730 41.667 14.21 0.00 39.26 2.32
2848 4666 5.412594 TCTCAAACTGCCAAATACACATCTC 59.587 40.000 0.00 0.00 0.00 2.75
2919 4737 4.024048 AGTCGAATTAAGCAGGTTGTGTTG 60.024 41.667 0.00 0.00 0.00 3.33
2922 4740 6.533723 TGTATAGTCGAATTAAGCAGGTTGTG 59.466 38.462 0.00 0.00 0.00 3.33
3008 4836 7.081976 GCGATAAAACCACTAGAAACAACATT 58.918 34.615 0.00 0.00 0.00 2.71
3017 4845 2.478370 CGACGGCGATAAAACCACTAGA 60.478 50.000 16.62 0.00 40.82 2.43
3020 4848 0.244450 TCGACGGCGATAAAACCACT 59.756 50.000 10.67 0.00 42.51 4.00
3040 4868 5.036117 ACTTGTGAACACTGTATCTTGGT 57.964 39.130 6.51 0.00 0.00 3.67
3051 4879 9.434559 GTTAGAACATCTTAAACTTGTGAACAC 57.565 33.333 0.00 0.00 0.00 3.32
3129 4958 0.036590 GGCCCATGCAAAACATTGGT 59.963 50.000 0.00 0.00 42.43 3.67
3184 5013 6.294899 CCTTTTCATGATGTGATGTTCACCTT 60.295 38.462 0.00 0.00 46.40 3.50
3186 5015 5.047802 ACCTTTTCATGATGTGATGTTCACC 60.048 40.000 0.00 0.00 46.40 4.02
3188 5017 5.769162 TCACCTTTTCATGATGTGATGTTCA 59.231 36.000 11.56 0.00 36.54 3.18
3189 5018 6.258230 TCACCTTTTCATGATGTGATGTTC 57.742 37.500 11.56 0.00 36.54 3.18
3191 5020 5.336213 GCTTCACCTTTTCATGATGTGATGT 60.336 40.000 19.99 5.63 36.54 3.06
3192 5021 5.100259 GCTTCACCTTTTCATGATGTGATG 58.900 41.667 14.66 16.19 36.54 3.07
3193 5022 4.768448 TGCTTCACCTTTTCATGATGTGAT 59.232 37.500 14.66 0.00 36.54 3.06
3194 5023 4.143543 TGCTTCACCTTTTCATGATGTGA 58.856 39.130 11.56 11.56 34.38 3.58
3197 5026 6.238676 CCTCTATGCTTCACCTTTTCATGATG 60.239 42.308 0.00 0.00 0.00 3.07
3199 5028 5.188434 CCTCTATGCTTCACCTTTTCATGA 58.812 41.667 0.00 0.00 0.00 3.07
3200 5029 4.201990 GCCTCTATGCTTCACCTTTTCATG 60.202 45.833 0.00 0.00 0.00 3.07
3201 5030 3.950395 GCCTCTATGCTTCACCTTTTCAT 59.050 43.478 0.00 0.00 0.00 2.57
3202 5031 3.244875 TGCCTCTATGCTTCACCTTTTCA 60.245 43.478 0.00 0.00 0.00 2.69
3203 5032 3.347216 TGCCTCTATGCTTCACCTTTTC 58.653 45.455 0.00 0.00 0.00 2.29
3204 5033 3.439857 TGCCTCTATGCTTCACCTTTT 57.560 42.857 0.00 0.00 0.00 2.27
3205 5034 3.659183 ATGCCTCTATGCTTCACCTTT 57.341 42.857 0.00 0.00 0.00 3.11
3206 5035 3.659183 AATGCCTCTATGCTTCACCTT 57.341 42.857 0.00 0.00 0.00 3.50
3207 5036 3.054139 TCAAATGCCTCTATGCTTCACCT 60.054 43.478 0.00 0.00 0.00 4.00
3208 5037 3.282021 TCAAATGCCTCTATGCTTCACC 58.718 45.455 0.00 0.00 0.00 4.02
3209 5038 4.732938 GCTTCAAATGCCTCTATGCTTCAC 60.733 45.833 0.00 0.00 0.00 3.18
3210 5039 3.379372 GCTTCAAATGCCTCTATGCTTCA 59.621 43.478 0.00 0.00 0.00 3.02
3211 5040 3.631227 AGCTTCAAATGCCTCTATGCTTC 59.369 43.478 0.00 0.00 0.00 3.86
3212 5041 3.380637 CAGCTTCAAATGCCTCTATGCTT 59.619 43.478 0.00 0.00 0.00 3.91
3213 5042 2.950309 CAGCTTCAAATGCCTCTATGCT 59.050 45.455 0.00 0.00 0.00 3.79
3214 5043 2.947652 TCAGCTTCAAATGCCTCTATGC 59.052 45.455 0.00 0.00 0.00 3.14
3215 5044 4.397103 TGTTCAGCTTCAAATGCCTCTATG 59.603 41.667 0.00 0.00 0.00 2.23
3216 5045 4.592942 TGTTCAGCTTCAAATGCCTCTAT 58.407 39.130 0.00 0.00 0.00 1.98
3217 5046 4.019792 TGTTCAGCTTCAAATGCCTCTA 57.980 40.909 0.00 0.00 0.00 2.43
3218 5047 2.867624 TGTTCAGCTTCAAATGCCTCT 58.132 42.857 0.00 0.00 0.00 3.69
3219 5048 3.192001 TGATGTTCAGCTTCAAATGCCTC 59.808 43.478 0.00 0.00 0.00 4.70
3220 5049 3.057033 GTGATGTTCAGCTTCAAATGCCT 60.057 43.478 0.00 0.00 33.80 4.75
3351 5182 3.467863 CCCCCTCCCCCTATAGTCTATAG 59.532 56.522 17.04 17.04 38.27 1.31
3382 5213 7.724061 ACATTATATATGAGTTGTTGAACCCCC 59.276 37.037 0.00 0.00 31.81 5.40
3383 5214 8.691661 ACATTATATATGAGTTGTTGAACCCC 57.308 34.615 0.00 0.00 31.81 4.95
3385 5216 9.864034 CGAACATTATATATGAGTTGTTGAACC 57.136 33.333 2.24 0.00 31.81 3.62
3386 5217 9.370126 GCGAACATTATATATGAGTTGTTGAAC 57.630 33.333 2.24 0.00 0.00 3.18
3387 5218 8.272866 CGCGAACATTATATATGAGTTGTTGAA 58.727 33.333 0.00 0.00 0.00 2.69
3388 5219 7.436970 ACGCGAACATTATATATGAGTTGTTGA 59.563 33.333 15.93 0.00 0.00 3.18
3389 5220 7.564128 ACGCGAACATTATATATGAGTTGTTG 58.436 34.615 15.93 0.00 0.00 3.33
3390 5221 7.709269 ACGCGAACATTATATATGAGTTGTT 57.291 32.000 15.93 0.00 0.00 2.83
3391 5222 8.981724 ATACGCGAACATTATATATGAGTTGT 57.018 30.769 15.93 0.00 0.00 3.32
3400 5231 8.912658 CAACTGACTTATACGCGAACATTATAT 58.087 33.333 15.93 0.00 0.00 0.86
3401 5232 8.130469 TCAACTGACTTATACGCGAACATTATA 58.870 33.333 15.93 0.42 0.00 0.98
3402 5233 6.976349 TCAACTGACTTATACGCGAACATTAT 59.024 34.615 15.93 1.59 0.00 1.28
3403 5234 6.324042 TCAACTGACTTATACGCGAACATTA 58.676 36.000 15.93 0.00 0.00 1.90
3404 5235 5.165676 TCAACTGACTTATACGCGAACATT 58.834 37.500 15.93 0.00 0.00 2.71
3405 5236 4.740268 TCAACTGACTTATACGCGAACAT 58.260 39.130 15.93 5.40 0.00 2.71
3406 5237 4.163458 TCAACTGACTTATACGCGAACA 57.837 40.909 15.93 0.00 0.00 3.18
3407 5238 4.796830 TGATCAACTGACTTATACGCGAAC 59.203 41.667 15.93 0.00 0.00 3.95
3408 5239 4.989044 TGATCAACTGACTTATACGCGAA 58.011 39.130 15.93 0.00 0.00 4.70
3409 5240 4.625972 TGATCAACTGACTTATACGCGA 57.374 40.909 15.93 0.00 0.00 5.87
3410 5241 5.890110 AATGATCAACTGACTTATACGCG 57.110 39.130 3.53 3.53 0.00 6.01
3411 5242 6.907212 CCAAAATGATCAACTGACTTATACGC 59.093 38.462 0.00 0.00 0.00 4.42
3412 5243 7.409697 CCCAAAATGATCAACTGACTTATACG 58.590 38.462 0.00 0.00 0.00 3.06
3413 5244 7.196331 GCCCAAAATGATCAACTGACTTATAC 58.804 38.462 0.00 0.00 0.00 1.47
3414 5245 6.321181 GGCCCAAAATGATCAACTGACTTATA 59.679 38.462 0.00 0.00 0.00 0.98
3415 5246 5.127682 GGCCCAAAATGATCAACTGACTTAT 59.872 40.000 0.00 0.00 0.00 1.73
3416 5247 4.462483 GGCCCAAAATGATCAACTGACTTA 59.538 41.667 0.00 0.00 0.00 2.24
3417 5248 3.259123 GGCCCAAAATGATCAACTGACTT 59.741 43.478 0.00 0.00 0.00 3.01
3418 5249 2.827921 GGCCCAAAATGATCAACTGACT 59.172 45.455 0.00 0.00 0.00 3.41
3419 5250 2.562298 TGGCCCAAAATGATCAACTGAC 59.438 45.455 0.00 0.00 0.00 3.51
3420 5251 2.886913 TGGCCCAAAATGATCAACTGA 58.113 42.857 0.00 0.00 0.00 3.41
3421 5252 3.681593 TTGGCCCAAAATGATCAACTG 57.318 42.857 0.00 0.00 0.00 3.16
3422 5253 3.244526 GGTTTGGCCCAAAATGATCAACT 60.245 43.478 11.20 0.00 35.03 3.16
3423 5254 3.073678 GGTTTGGCCCAAAATGATCAAC 58.926 45.455 11.20 0.00 35.03 3.18
3424 5255 2.707791 TGGTTTGGCCCAAAATGATCAA 59.292 40.909 11.20 0.00 35.03 2.57
3425 5256 2.333069 TGGTTTGGCCCAAAATGATCA 58.667 42.857 11.20 0.00 35.03 2.92
3426 5257 3.415457 TTGGTTTGGCCCAAAATGATC 57.585 42.857 11.20 0.00 41.47 2.92
3434 5265 1.077828 TGGATGTATTGGTTTGGCCCA 59.922 47.619 0.00 0.00 36.04 5.36
3435 5266 1.480545 GTGGATGTATTGGTTTGGCCC 59.519 52.381 0.00 0.00 36.04 5.80
3436 5267 2.175202 TGTGGATGTATTGGTTTGGCC 58.825 47.619 0.00 0.00 37.90 5.36
3437 5268 3.446873 TGATGTGGATGTATTGGTTTGGC 59.553 43.478 0.00 0.00 0.00 4.52
3438 5269 5.857471 ATGATGTGGATGTATTGGTTTGG 57.143 39.130 0.00 0.00 0.00 3.28
3439 5270 6.865411 TGAATGATGTGGATGTATTGGTTTG 58.135 36.000 0.00 0.00 0.00 2.93
3440 5271 6.406177 GCTGAATGATGTGGATGTATTGGTTT 60.406 38.462 0.00 0.00 0.00 3.27
3441 5272 5.068198 GCTGAATGATGTGGATGTATTGGTT 59.932 40.000 0.00 0.00 0.00 3.67
3442 5273 4.581824 GCTGAATGATGTGGATGTATTGGT 59.418 41.667 0.00 0.00 0.00 3.67
3443 5274 4.022589 GGCTGAATGATGTGGATGTATTGG 60.023 45.833 0.00 0.00 0.00 3.16
3444 5275 4.581409 TGGCTGAATGATGTGGATGTATTG 59.419 41.667 0.00 0.00 0.00 1.90
3445 5276 4.795469 TGGCTGAATGATGTGGATGTATT 58.205 39.130 0.00 0.00 0.00 1.89
3446 5277 4.103627 TCTGGCTGAATGATGTGGATGTAT 59.896 41.667 0.00 0.00 0.00 2.29
3447 5278 3.455543 TCTGGCTGAATGATGTGGATGTA 59.544 43.478 0.00 0.00 0.00 2.29
3448 5279 2.240414 TCTGGCTGAATGATGTGGATGT 59.760 45.455 0.00 0.00 0.00 3.06
3449 5280 2.927028 TCTGGCTGAATGATGTGGATG 58.073 47.619 0.00 0.00 0.00 3.51
3450 5281 3.657398 TTCTGGCTGAATGATGTGGAT 57.343 42.857 2.37 0.00 0.00 3.41
3451 5282 3.438216 TTTCTGGCTGAATGATGTGGA 57.562 42.857 7.68 0.00 34.24 4.02
3452 5283 4.730949 ATTTTCTGGCTGAATGATGTGG 57.269 40.909 7.68 0.00 34.24 4.17
3453 5284 8.537049 TTTTTATTTTCTGGCTGAATGATGTG 57.463 30.769 7.68 0.00 34.24 3.21
3492 5323 2.671130 AACACCAGGTGCAAAAAGTG 57.329 45.000 20.48 6.64 36.98 3.16
3493 5324 4.464597 TCTTAAACACCAGGTGCAAAAAGT 59.535 37.500 20.48 0.00 36.98 2.66
3494 5325 5.004922 TCTTAAACACCAGGTGCAAAAAG 57.995 39.130 20.48 16.67 36.98 2.27
3495 5326 5.606348 ATCTTAAACACCAGGTGCAAAAA 57.394 34.783 20.48 8.13 36.98 1.94
3496 5327 5.452636 GGAATCTTAAACACCAGGTGCAAAA 60.453 40.000 20.48 9.88 36.98 2.44
3497 5328 4.038642 GGAATCTTAAACACCAGGTGCAAA 59.961 41.667 20.48 10.24 36.98 3.68
3498 5329 3.572255 GGAATCTTAAACACCAGGTGCAA 59.428 43.478 20.48 10.25 36.98 4.08
3499 5330 3.153919 GGAATCTTAAACACCAGGTGCA 58.846 45.455 20.48 2.00 36.98 4.57
3500 5331 3.191371 CAGGAATCTTAAACACCAGGTGC 59.809 47.826 20.48 0.00 36.98 5.01
3501 5332 4.216257 CACAGGAATCTTAAACACCAGGTG 59.784 45.833 18.93 18.93 39.75 4.00
3502 5333 4.398319 CACAGGAATCTTAAACACCAGGT 58.602 43.478 0.00 0.00 0.00 4.00
3503 5334 3.758554 CCACAGGAATCTTAAACACCAGG 59.241 47.826 0.00 0.00 0.00 4.45
3504 5335 3.191371 GCCACAGGAATCTTAAACACCAG 59.809 47.826 0.00 0.00 0.00 4.00
3505 5336 3.153919 GCCACAGGAATCTTAAACACCA 58.846 45.455 0.00 0.00 0.00 4.17
3506 5337 2.161609 CGCCACAGGAATCTTAAACACC 59.838 50.000 0.00 0.00 0.00 4.16
3507 5338 2.161609 CCGCCACAGGAATCTTAAACAC 59.838 50.000 0.00 0.00 0.00 3.32
3508 5339 2.432444 CCGCCACAGGAATCTTAAACA 58.568 47.619 0.00 0.00 0.00 2.83
3509 5340 1.743394 CCCGCCACAGGAATCTTAAAC 59.257 52.381 0.00 0.00 0.00 2.01
3510 5341 1.953311 GCCCGCCACAGGAATCTTAAA 60.953 52.381 0.00 0.00 0.00 1.52
3511 5342 0.393808 GCCCGCCACAGGAATCTTAA 60.394 55.000 0.00 0.00 0.00 1.85
3512 5343 1.223487 GCCCGCCACAGGAATCTTA 59.777 57.895 0.00 0.00 0.00 2.10
3513 5344 2.044946 GCCCGCCACAGGAATCTT 60.045 61.111 0.00 0.00 0.00 2.40
3514 5345 4.473520 CGCCCGCCACAGGAATCT 62.474 66.667 0.00 0.00 0.00 2.40
3515 5346 3.757248 ATCGCCCGCCACAGGAATC 62.757 63.158 0.00 0.00 0.00 2.52
3516 5347 3.757248 GATCGCCCGCCACAGGAAT 62.757 63.158 0.00 0.00 0.00 3.01
3517 5348 4.467084 GATCGCCCGCCACAGGAA 62.467 66.667 0.00 0.00 0.00 3.36
3520 5351 2.693250 TATTCGATCGCCCGCCACAG 62.693 60.000 11.09 0.00 0.00 3.66
3521 5352 2.299503 TTATTCGATCGCCCGCCACA 62.300 55.000 11.09 0.00 0.00 4.17
3522 5353 1.155424 TTTATTCGATCGCCCGCCAC 61.155 55.000 11.09 0.00 0.00 5.01
3523 5354 1.144276 TTTATTCGATCGCCCGCCA 59.856 52.632 11.09 0.00 0.00 5.69
3524 5355 1.155424 TGTTTATTCGATCGCCCGCC 61.155 55.000 11.09 0.00 0.00 6.13
3525 5356 0.865769 ATGTTTATTCGATCGCCCGC 59.134 50.000 11.09 0.00 0.00 6.13
3526 5357 1.194547 CCATGTTTATTCGATCGCCCG 59.805 52.381 11.09 0.00 0.00 6.13
3527 5358 1.069227 GCCATGTTTATTCGATCGCCC 60.069 52.381 11.09 0.00 0.00 6.13
3528 5359 1.601903 TGCCATGTTTATTCGATCGCC 59.398 47.619 11.09 0.00 0.00 5.54
3529 5360 2.908634 CTGCCATGTTTATTCGATCGC 58.091 47.619 11.09 0.00 0.00 4.58
3530 5361 2.287644 TGCTGCCATGTTTATTCGATCG 59.712 45.455 9.36 9.36 0.00 3.69
3531 5362 3.561310 TCTGCTGCCATGTTTATTCGATC 59.439 43.478 0.00 0.00 0.00 3.69
3532 5363 3.544684 TCTGCTGCCATGTTTATTCGAT 58.455 40.909 0.00 0.00 0.00 3.59
3533 5364 2.984562 TCTGCTGCCATGTTTATTCGA 58.015 42.857 0.00 0.00 0.00 3.71
3534 5365 3.119884 TGTTCTGCTGCCATGTTTATTCG 60.120 43.478 0.00 0.00 0.00 3.34
3535 5366 4.439305 TGTTCTGCTGCCATGTTTATTC 57.561 40.909 0.00 0.00 0.00 1.75
3536 5367 4.870123 TTGTTCTGCTGCCATGTTTATT 57.130 36.364 0.00 0.00 0.00 1.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.