Multiple sequence alignment - TraesCS7B01G455200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G455200 chr7B 100.000 2531 0 0 1 2531 716003028 716005558 0.000000e+00 4674
1 TraesCS7B01G455200 chr7B 96.555 1974 44 6 558 2531 684309167 684311116 0.000000e+00 3247
2 TraesCS7B01G455200 chr7B 96.203 1817 42 10 563 2377 697603941 697602150 0.000000e+00 2948
3 TraesCS7B01G455200 chr3B 97.716 1970 38 6 563 2531 31297187 31299150 0.000000e+00 3382
4 TraesCS7B01G455200 chr3B 100.000 218 0 0 345 562 471875044 471874827 1.090000e-108 403
5 TraesCS7B01G455200 chr6B 96.454 1974 46 7 561 2531 22001272 21999320 0.000000e+00 3236
6 TraesCS7B01G455200 chr6B 95.384 1993 41 14 563 2531 48431695 48429730 0.000000e+00 3123
7 TraesCS7B01G455200 chr6B 95.760 1816 48 5 724 2531 22075157 22073363 0.000000e+00 2900
8 TraesCS7B01G455200 chr2B 96.294 1970 43 11 563 2531 53975963 53977903 0.000000e+00 3206
9 TraesCS7B01G455200 chr2B 98.661 224 3 0 339 562 9268839 9269062 5.070000e-107 398
10 TraesCS7B01G455200 chr2B 99.083 218 2 0 345 562 271776349 271776132 2.360000e-105 392
11 TraesCS7B01G455200 chr2B 96.996 233 5 2 331 562 71065365 71065134 8.490000e-105 390
12 TraesCS7B01G455200 chrUn 95.762 1982 44 20 562 2531 7968912 7966959 0.000000e+00 3158
13 TraesCS7B01G455200 chrUn 94.521 1971 69 11 562 2531 2822312 2820380 0.000000e+00 3005
14 TraesCS7B01G455200 chrUn 94.670 1426 46 11 1106 2531 275942709 275944104 0.000000e+00 2185
15 TraesCS7B01G455200 chr5B 95.255 1981 55 11 563 2531 593500286 593498333 0.000000e+00 3101
16 TraesCS7B01G455200 chr5B 99.095 221 2 0 342 562 477153225 477153445 5.070000e-107 398
17 TraesCS7B01G455200 chr5B 98.667 225 2 1 339 562 636244047 636243823 5.070000e-107 398
18 TraesCS7B01G455200 chr5B 98.230 226 4 0 337 562 512030346 512030571 1.820000e-106 396
19 TraesCS7B01G455200 chr5B 98.643 221 3 0 345 565 485692403 485692183 2.360000e-105 392
20 TraesCS7B01G455200 chr1B 94.518 1970 49 14 563 2531 637367014 637365103 0.000000e+00 2985
21 TraesCS7B01G455200 chr1B 98.222 225 4 0 338 562 93040682 93040906 6.560000e-106 394
22 TraesCS7B01G455200 chr7A 96.360 1813 40 9 563 2374 40032044 40033831 0.000000e+00 2959
23 TraesCS7B01G455200 chr6A 96.258 1817 41 10 563 2377 593775859 593774068 0.000000e+00 2953
24 TraesCS7B01G455200 chr4B 96.211 1821 40 10 558 2374 437234393 437236188 0.000000e+00 2953
25 TraesCS7B01G455200 chr4A 96.196 1814 42 9 563 2374 724630114 724631902 0.000000e+00 2942


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G455200 chr7B 716003028 716005558 2530 False 4674 4674 100.000 1 2531 1 chr7B.!!$F2 2530
1 TraesCS7B01G455200 chr7B 684309167 684311116 1949 False 3247 3247 96.555 558 2531 1 chr7B.!!$F1 1973
2 TraesCS7B01G455200 chr7B 697602150 697603941 1791 True 2948 2948 96.203 563 2377 1 chr7B.!!$R1 1814
3 TraesCS7B01G455200 chr3B 31297187 31299150 1963 False 3382 3382 97.716 563 2531 1 chr3B.!!$F1 1968
4 TraesCS7B01G455200 chr6B 21999320 22001272 1952 True 3236 3236 96.454 561 2531 1 chr6B.!!$R1 1970
5 TraesCS7B01G455200 chr6B 48429730 48431695 1965 True 3123 3123 95.384 563 2531 1 chr6B.!!$R3 1968
6 TraesCS7B01G455200 chr6B 22073363 22075157 1794 True 2900 2900 95.760 724 2531 1 chr6B.!!$R2 1807
7 TraesCS7B01G455200 chr2B 53975963 53977903 1940 False 3206 3206 96.294 563 2531 1 chr2B.!!$F2 1968
8 TraesCS7B01G455200 chrUn 7966959 7968912 1953 True 3158 3158 95.762 562 2531 1 chrUn.!!$R2 1969
9 TraesCS7B01G455200 chrUn 2820380 2822312 1932 True 3005 3005 94.521 562 2531 1 chrUn.!!$R1 1969
10 TraesCS7B01G455200 chrUn 275942709 275944104 1395 False 2185 2185 94.670 1106 2531 1 chrUn.!!$F1 1425
11 TraesCS7B01G455200 chr5B 593498333 593500286 1953 True 3101 3101 95.255 563 2531 1 chr5B.!!$R2 1968
12 TraesCS7B01G455200 chr1B 637365103 637367014 1911 True 2985 2985 94.518 563 2531 1 chr1B.!!$R1 1968
13 TraesCS7B01G455200 chr7A 40032044 40033831 1787 False 2959 2959 96.360 563 2374 1 chr7A.!!$F1 1811
14 TraesCS7B01G455200 chr6A 593774068 593775859 1791 True 2953 2953 96.258 563 2377 1 chr6A.!!$R1 1814
15 TraesCS7B01G455200 chr4B 437234393 437236188 1795 False 2953 2953 96.211 558 2374 1 chr4B.!!$F1 1816
16 TraesCS7B01G455200 chr4A 724630114 724631902 1788 False 2942 2942 96.196 563 2374 1 chr4A.!!$F1 1811

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
156 157 0.034186 AGGCGATGGCAAATCTCCAA 60.034 50.0 1.01 0.0 42.47 3.53 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2137 2179 0.610687 TCTCACCACACACACACACA 59.389 50.0 0.0 0.0 0.0 3.72 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.887790 TCAGAGGTCGGATGTGGAG 58.112 57.895 0.00 0.00 0.00 3.86
19 20 0.039764 TCAGAGGTCGGATGTGGAGT 59.960 55.000 0.00 0.00 0.00 3.85
20 21 0.174389 CAGAGGTCGGATGTGGAGTG 59.826 60.000 0.00 0.00 0.00 3.51
21 22 0.039764 AGAGGTCGGATGTGGAGTGA 59.960 55.000 0.00 0.00 0.00 3.41
22 23 0.457851 GAGGTCGGATGTGGAGTGAG 59.542 60.000 0.00 0.00 0.00 3.51
23 24 0.039764 AGGTCGGATGTGGAGTGAGA 59.960 55.000 0.00 0.00 0.00 3.27
24 25 0.895530 GGTCGGATGTGGAGTGAGAA 59.104 55.000 0.00 0.00 0.00 2.87
25 26 1.404315 GGTCGGATGTGGAGTGAGAAC 60.404 57.143 0.00 0.00 0.00 3.01
26 27 1.272490 GTCGGATGTGGAGTGAGAACA 59.728 52.381 0.00 0.00 0.00 3.18
27 28 1.967779 TCGGATGTGGAGTGAGAACAA 59.032 47.619 0.00 0.00 0.00 2.83
28 29 2.069273 CGGATGTGGAGTGAGAACAAC 58.931 52.381 0.00 0.00 0.00 3.32
29 30 2.069273 GGATGTGGAGTGAGAACAACG 58.931 52.381 0.00 0.00 0.00 4.10
30 31 1.461127 GATGTGGAGTGAGAACAACGC 59.539 52.381 0.00 0.00 0.00 4.84
31 32 0.531974 TGTGGAGTGAGAACAACGCC 60.532 55.000 0.00 0.00 0.00 5.68
32 33 0.531974 GTGGAGTGAGAACAACGCCA 60.532 55.000 0.00 0.00 0.00 5.69
33 34 0.531974 TGGAGTGAGAACAACGCCAC 60.532 55.000 0.00 0.00 0.00 5.01
34 35 1.228657 GGAGTGAGAACAACGCCACC 61.229 60.000 0.00 0.00 0.00 4.61
35 36 0.531974 GAGTGAGAACAACGCCACCA 60.532 55.000 0.00 0.00 0.00 4.17
36 37 0.107410 AGTGAGAACAACGCCACCAA 60.107 50.000 0.00 0.00 0.00 3.67
37 38 0.307760 GTGAGAACAACGCCACCAAG 59.692 55.000 0.00 0.00 0.00 3.61
38 39 0.817634 TGAGAACAACGCCACCAAGG 60.818 55.000 0.00 0.00 41.84 3.61
50 51 2.044252 CCAAGGCTGGCAGCAGAT 60.044 61.111 37.49 21.72 44.75 2.90
51 52 1.225426 CCAAGGCTGGCAGCAGATA 59.775 57.895 37.49 0.00 44.75 1.98
52 53 0.818445 CCAAGGCTGGCAGCAGATAG 60.818 60.000 37.49 22.04 44.75 2.08
53 54 0.818445 CAAGGCTGGCAGCAGATAGG 60.818 60.000 37.49 17.99 44.75 2.57
54 55 1.277580 AAGGCTGGCAGCAGATAGGT 61.278 55.000 37.49 13.40 44.75 3.08
55 56 1.225704 GGCTGGCAGCAGATAGGTT 59.774 57.895 37.49 0.00 44.75 3.50
56 57 0.394899 GGCTGGCAGCAGATAGGTTT 60.395 55.000 37.49 0.00 44.75 3.27
57 58 0.737219 GCTGGCAGCAGATAGGTTTG 59.263 55.000 33.33 0.00 41.89 2.93
58 59 1.386533 CTGGCAGCAGATAGGTTTGG 58.613 55.000 0.00 0.00 0.00 3.28
59 60 0.698238 TGGCAGCAGATAGGTTTGGT 59.302 50.000 0.00 0.00 0.00 3.67
60 61 1.098050 GGCAGCAGATAGGTTTGGTG 58.902 55.000 0.00 0.00 43.63 4.17
61 62 1.340017 GGCAGCAGATAGGTTTGGTGA 60.340 52.381 7.74 0.00 43.52 4.02
62 63 2.012673 GCAGCAGATAGGTTTGGTGAG 58.987 52.381 7.74 0.00 43.52 3.51
63 64 2.355108 GCAGCAGATAGGTTTGGTGAGA 60.355 50.000 7.74 0.00 43.52 3.27
64 65 3.683847 GCAGCAGATAGGTTTGGTGAGAT 60.684 47.826 7.74 0.00 43.52 2.75
65 66 4.125703 CAGCAGATAGGTTTGGTGAGATC 58.874 47.826 0.00 0.00 43.52 2.75
66 67 3.135530 AGCAGATAGGTTTGGTGAGATCC 59.864 47.826 0.00 0.00 0.00 3.36
67 68 3.745797 GCAGATAGGTTTGGTGAGATCCC 60.746 52.174 0.00 0.00 0.00 3.85
68 69 3.713764 CAGATAGGTTTGGTGAGATCCCT 59.286 47.826 0.00 0.00 0.00 4.20
69 70 3.713764 AGATAGGTTTGGTGAGATCCCTG 59.286 47.826 0.00 0.00 0.00 4.45
70 71 2.044793 AGGTTTGGTGAGATCCCTGA 57.955 50.000 0.00 0.00 0.00 3.86
71 72 2.566746 AGGTTTGGTGAGATCCCTGAT 58.433 47.619 0.00 0.00 0.00 2.90
72 73 2.240667 AGGTTTGGTGAGATCCCTGATG 59.759 50.000 0.00 0.00 0.00 3.07
73 74 2.239654 GGTTTGGTGAGATCCCTGATGA 59.760 50.000 0.00 0.00 0.00 2.92
74 75 3.308402 GGTTTGGTGAGATCCCTGATGAA 60.308 47.826 0.00 0.00 0.00 2.57
75 76 3.920231 TTGGTGAGATCCCTGATGAAG 57.080 47.619 0.00 0.00 0.00 3.02
76 77 2.837947 TGGTGAGATCCCTGATGAAGT 58.162 47.619 0.00 0.00 0.00 3.01
77 78 2.502947 TGGTGAGATCCCTGATGAAGTG 59.497 50.000 0.00 0.00 0.00 3.16
78 79 2.559440 GTGAGATCCCTGATGAAGTGC 58.441 52.381 0.00 0.00 0.00 4.40
79 80 2.170187 GTGAGATCCCTGATGAAGTGCT 59.830 50.000 0.00 0.00 0.00 4.40
80 81 2.169978 TGAGATCCCTGATGAAGTGCTG 59.830 50.000 0.00 0.00 0.00 4.41
81 82 1.489649 AGATCCCTGATGAAGTGCTGG 59.510 52.381 0.00 0.00 0.00 4.85
82 83 0.106819 ATCCCTGATGAAGTGCTGGC 60.107 55.000 0.00 0.00 0.00 4.85
83 84 1.001764 CCCTGATGAAGTGCTGGCA 60.002 57.895 0.00 0.00 0.00 4.92
84 85 1.030488 CCCTGATGAAGTGCTGGCAG 61.030 60.000 10.94 10.94 0.00 4.85
85 86 0.035725 CCTGATGAAGTGCTGGCAGA 60.036 55.000 20.86 0.00 0.00 4.26
86 87 1.085091 CTGATGAAGTGCTGGCAGAC 58.915 55.000 20.86 13.40 0.00 3.51
87 88 0.321919 TGATGAAGTGCTGGCAGACC 60.322 55.000 20.86 7.25 0.00 3.85
88 89 1.001641 ATGAAGTGCTGGCAGACCC 60.002 57.895 20.86 4.44 33.59 4.46
89 90 2.743928 GAAGTGCTGGCAGACCCG 60.744 66.667 20.86 0.00 35.87 5.28
90 91 3.240134 GAAGTGCTGGCAGACCCGA 62.240 63.158 20.86 0.00 35.87 5.14
91 92 3.537206 AAGTGCTGGCAGACCCGAC 62.537 63.158 20.86 5.85 35.87 4.79
92 93 4.314440 GTGCTGGCAGACCCGACA 62.314 66.667 20.86 1.91 35.87 4.35
93 94 4.007644 TGCTGGCAGACCCGACAG 62.008 66.667 20.86 0.00 35.87 3.51
94 95 4.008933 GCTGGCAGACCCGACAGT 62.009 66.667 20.86 0.00 35.87 3.55
95 96 2.047844 CTGGCAGACCCGACAGTG 60.048 66.667 9.42 0.00 35.87 3.66
96 97 4.314440 TGGCAGACCCGACAGTGC 62.314 66.667 0.00 0.00 35.87 4.40
97 98 4.314440 GGCAGACCCGACAGTGCA 62.314 66.667 0.00 0.00 37.68 4.57
98 99 2.740055 GCAGACCCGACAGTGCAG 60.740 66.667 0.00 0.00 35.91 4.41
99 100 2.047844 CAGACCCGACAGTGCAGG 60.048 66.667 0.00 0.00 0.00 4.85
100 101 4.008933 AGACCCGACAGTGCAGGC 62.009 66.667 0.00 0.00 0.00 4.85
101 102 4.008933 GACCCGACAGTGCAGGCT 62.009 66.667 0.00 0.00 0.00 4.58
102 103 2.603473 ACCCGACAGTGCAGGCTA 60.603 61.111 0.00 0.00 0.00 3.93
103 104 2.125512 CCCGACAGTGCAGGCTAC 60.126 66.667 0.00 0.00 0.00 3.58
104 105 2.507102 CCGACAGTGCAGGCTACG 60.507 66.667 0.00 0.00 0.00 3.51
105 106 2.566529 CGACAGTGCAGGCTACGA 59.433 61.111 0.00 0.00 0.00 3.43
106 107 1.139734 CGACAGTGCAGGCTACGAT 59.860 57.895 0.00 0.00 0.00 3.73
107 108 0.867753 CGACAGTGCAGGCTACGATC 60.868 60.000 0.00 0.00 0.00 3.69
108 109 0.867753 GACAGTGCAGGCTACGATCG 60.868 60.000 14.88 14.88 0.00 3.69
109 110 2.105128 AGTGCAGGCTACGATCGC 59.895 61.111 16.60 0.00 0.00 4.58
110 111 2.105128 GTGCAGGCTACGATCGCT 59.895 61.111 16.60 5.20 0.00 4.93
111 112 2.104928 TGCAGGCTACGATCGCTG 59.895 61.111 16.60 15.01 0.00 5.18
112 113 3.333969 GCAGGCTACGATCGCTGC 61.334 66.667 23.30 23.30 0.00 5.25
113 114 3.026879 CAGGCTACGATCGCTGCG 61.027 66.667 17.25 17.25 0.00 5.18
114 115 4.271816 AGGCTACGATCGCTGCGG 62.272 66.667 23.03 8.78 0.00 5.69
115 116 4.570663 GGCTACGATCGCTGCGGT 62.571 66.667 23.03 16.58 0.00 5.68
116 117 3.025176 GCTACGATCGCTGCGGTC 61.025 66.667 24.43 24.43 33.21 4.79
117 118 2.407616 CTACGATCGCTGCGGTCA 59.592 61.111 31.51 14.79 36.73 4.02
118 119 1.655654 CTACGATCGCTGCGGTCAG 60.656 63.158 31.51 25.13 36.73 3.51
119 120 2.324332 CTACGATCGCTGCGGTCAGT 62.324 60.000 31.51 28.52 42.29 3.41
125 126 3.503363 GCTGCGGTCAGTGCCATC 61.503 66.667 0.00 0.00 42.29 3.51
126 127 2.046988 CTGCGGTCAGTGCCATCA 60.047 61.111 4.76 1.56 35.61 3.07
127 128 1.672030 CTGCGGTCAGTGCCATCAA 60.672 57.895 4.76 0.00 35.61 2.57
128 129 1.228094 TGCGGTCAGTGCCATCAAA 60.228 52.632 4.76 0.00 0.00 2.69
129 130 0.608856 TGCGGTCAGTGCCATCAAAT 60.609 50.000 4.76 0.00 0.00 2.32
130 131 0.527565 GCGGTCAGTGCCATCAAATT 59.472 50.000 4.76 0.00 0.00 1.82
131 132 1.733389 GCGGTCAGTGCCATCAAATTG 60.733 52.381 4.76 0.00 0.00 2.32
132 133 1.135315 CGGTCAGTGCCATCAAATTGG 60.135 52.381 0.00 0.00 39.94 3.16
133 134 1.205417 GGTCAGTGCCATCAAATTGGG 59.795 52.381 0.00 0.00 37.24 4.12
134 135 2.170166 GTCAGTGCCATCAAATTGGGA 58.830 47.619 0.00 0.00 37.24 4.37
137 138 3.782366 TGCCATCAAATTGGGACCA 57.218 47.368 0.00 0.00 37.24 4.02
138 139 1.559368 TGCCATCAAATTGGGACCAG 58.441 50.000 0.00 0.00 37.24 4.00
139 140 0.826062 GCCATCAAATTGGGACCAGG 59.174 55.000 0.00 0.00 37.24 4.45
140 141 0.826062 CCATCAAATTGGGACCAGGC 59.174 55.000 0.00 0.00 32.80 4.85
141 142 0.457035 CATCAAATTGGGACCAGGCG 59.543 55.000 0.00 0.00 0.00 5.52
142 143 0.331278 ATCAAATTGGGACCAGGCGA 59.669 50.000 0.00 0.00 0.00 5.54
143 144 0.331278 TCAAATTGGGACCAGGCGAT 59.669 50.000 0.00 0.00 0.00 4.58
144 145 0.457035 CAAATTGGGACCAGGCGATG 59.543 55.000 0.00 0.00 0.00 3.84
152 153 4.247781 CCAGGCGATGGCAAATCT 57.752 55.556 1.01 0.00 43.83 2.40
153 154 2.028130 CCAGGCGATGGCAAATCTC 58.972 57.895 1.01 0.00 43.83 2.75
154 155 1.450531 CCAGGCGATGGCAAATCTCC 61.451 60.000 1.01 0.50 43.83 3.71
155 156 0.749091 CAGGCGATGGCAAATCTCCA 60.749 55.000 1.01 0.00 42.47 3.86
156 157 0.034186 AGGCGATGGCAAATCTCCAA 60.034 50.000 1.01 0.00 42.47 3.53
157 158 0.383231 GGCGATGGCAAATCTCCAAG 59.617 55.000 1.01 0.00 42.47 3.61
158 159 0.248784 GCGATGGCAAATCTCCAAGC 60.249 55.000 0.00 0.00 39.62 4.01
159 160 1.097232 CGATGGCAAATCTCCAAGCA 58.903 50.000 0.00 0.00 37.13 3.91
160 161 1.202222 CGATGGCAAATCTCCAAGCAC 60.202 52.381 0.00 0.00 37.13 4.40
161 162 1.820519 GATGGCAAATCTCCAAGCACA 59.179 47.619 0.00 0.00 37.13 4.57
162 163 0.961019 TGGCAAATCTCCAAGCACAC 59.039 50.000 0.00 0.00 0.00 3.82
163 164 0.244721 GGCAAATCTCCAAGCACACC 59.755 55.000 0.00 0.00 0.00 4.16
164 165 0.109597 GCAAATCTCCAAGCACACCG 60.110 55.000 0.00 0.00 0.00 4.94
165 166 0.109597 CAAATCTCCAAGCACACCGC 60.110 55.000 0.00 0.00 42.91 5.68
166 167 1.244019 AAATCTCCAAGCACACCGCC 61.244 55.000 0.00 0.00 44.04 6.13
167 168 2.410322 AATCTCCAAGCACACCGCCA 62.410 55.000 0.00 0.00 44.04 5.69
168 169 3.357079 CTCCAAGCACACCGCCAC 61.357 66.667 0.00 0.00 44.04 5.01
175 176 4.622456 CACACCGCCACGCAAACC 62.622 66.667 0.00 0.00 0.00 3.27
180 181 4.025401 CGCCACGCAAACCCAGTC 62.025 66.667 0.00 0.00 0.00 3.51
181 182 2.594592 GCCACGCAAACCCAGTCT 60.595 61.111 0.00 0.00 0.00 3.24
182 183 2.908073 GCCACGCAAACCCAGTCTG 61.908 63.158 0.00 0.00 0.00 3.51
183 184 2.260869 CCACGCAAACCCAGTCTGG 61.261 63.158 12.40 12.40 37.25 3.86
184 185 1.227823 CACGCAAACCCAGTCTGGA 60.228 57.895 21.23 0.00 40.96 3.86
185 186 1.071471 ACGCAAACCCAGTCTGGAG 59.929 57.895 21.23 12.59 40.96 3.86
186 187 1.672356 CGCAAACCCAGTCTGGAGG 60.672 63.158 21.23 7.03 40.96 4.30
187 188 1.761174 GCAAACCCAGTCTGGAGGA 59.239 57.895 21.23 0.00 40.96 3.71
188 189 0.110486 GCAAACCCAGTCTGGAGGAA 59.890 55.000 21.23 0.00 40.96 3.36
189 190 1.884067 GCAAACCCAGTCTGGAGGAAG 60.884 57.143 21.23 5.49 40.96 3.46
190 191 1.699634 CAAACCCAGTCTGGAGGAAGA 59.300 52.381 21.23 0.00 40.96 2.87
191 192 1.650528 AACCCAGTCTGGAGGAAGAG 58.349 55.000 21.23 3.99 40.96 2.85
192 193 0.252467 ACCCAGTCTGGAGGAAGAGG 60.252 60.000 21.23 3.23 40.96 3.69
193 194 0.980231 CCCAGTCTGGAGGAAGAGGG 60.980 65.000 21.23 0.00 40.96 4.30
194 195 0.980231 CCAGTCTGGAGGAAGAGGGG 60.980 65.000 14.26 0.00 40.96 4.79
195 196 0.252467 CAGTCTGGAGGAAGAGGGGT 60.252 60.000 0.00 0.00 0.00 4.95
196 197 0.041982 AGTCTGGAGGAAGAGGGGTC 59.958 60.000 0.00 0.00 0.00 4.46
197 198 0.252284 GTCTGGAGGAAGAGGGGTCA 60.252 60.000 0.00 0.00 0.00 4.02
198 199 0.491823 TCTGGAGGAAGAGGGGTCAA 59.508 55.000 0.00 0.00 0.00 3.18
199 200 1.132527 TCTGGAGGAAGAGGGGTCAAA 60.133 52.381 0.00 0.00 0.00 2.69
200 201 1.003696 CTGGAGGAAGAGGGGTCAAAC 59.996 57.143 0.00 0.00 0.00 2.93
201 202 1.064825 GGAGGAAGAGGGGTCAAACA 58.935 55.000 0.00 0.00 0.00 2.83
202 203 1.271434 GGAGGAAGAGGGGTCAAACAC 60.271 57.143 0.00 0.00 0.00 3.32
203 204 0.771755 AGGAAGAGGGGTCAAACACC 59.228 55.000 0.00 0.00 43.77 4.16
204 205 0.476771 GGAAGAGGGGTCAAACACCA 59.523 55.000 0.48 0.00 46.63 4.17
205 206 1.133606 GGAAGAGGGGTCAAACACCAA 60.134 52.381 0.48 0.00 46.63 3.67
206 207 1.954382 GAAGAGGGGTCAAACACCAAC 59.046 52.381 0.48 0.00 46.63 3.77
207 208 0.923358 AGAGGGGTCAAACACCAACA 59.077 50.000 0.48 0.00 46.63 3.33
208 209 1.286553 AGAGGGGTCAAACACCAACAA 59.713 47.619 0.48 0.00 46.63 2.83
209 210 2.104170 GAGGGGTCAAACACCAACAAA 58.896 47.619 0.48 0.00 46.63 2.83
210 211 2.698274 GAGGGGTCAAACACCAACAAAT 59.302 45.455 0.48 0.00 46.63 2.32
211 212 2.698274 AGGGGTCAAACACCAACAAATC 59.302 45.455 0.48 0.00 46.63 2.17
212 213 4.511732 AGGGGTCAAACACCAACAAATCC 61.512 47.826 0.48 0.00 46.63 3.01
213 214 3.106242 GGTCAAACACCAACAAATCCC 57.894 47.619 0.00 0.00 45.98 3.85
214 215 2.432510 GGTCAAACACCAACAAATCCCA 59.567 45.455 0.00 0.00 45.98 4.37
215 216 3.118592 GGTCAAACACCAACAAATCCCAA 60.119 43.478 0.00 0.00 45.98 4.12
216 217 3.868661 GTCAAACACCAACAAATCCCAAC 59.131 43.478 0.00 0.00 0.00 3.77
217 218 3.118592 TCAAACACCAACAAATCCCAACC 60.119 43.478 0.00 0.00 0.00 3.77
218 219 2.470057 ACACCAACAAATCCCAACCT 57.530 45.000 0.00 0.00 0.00 3.50
219 220 2.316108 ACACCAACAAATCCCAACCTC 58.684 47.619 0.00 0.00 0.00 3.85
220 221 1.618343 CACCAACAAATCCCAACCTCC 59.382 52.381 0.00 0.00 0.00 4.30
221 222 1.503347 ACCAACAAATCCCAACCTCCT 59.497 47.619 0.00 0.00 0.00 3.69
222 223 2.090775 ACCAACAAATCCCAACCTCCTT 60.091 45.455 0.00 0.00 0.00 3.36
223 224 2.972021 CCAACAAATCCCAACCTCCTTT 59.028 45.455 0.00 0.00 0.00 3.11
224 225 3.244181 CCAACAAATCCCAACCTCCTTTG 60.244 47.826 0.00 0.00 33.98 2.77
225 226 2.608623 ACAAATCCCAACCTCCTTTGG 58.391 47.619 0.00 0.00 45.11 3.28
230 231 3.346426 CCAACCTCCTTTGGGACTG 57.654 57.895 0.00 0.00 42.23 3.51
231 232 0.771127 CCAACCTCCTTTGGGACTGA 59.229 55.000 0.00 0.00 42.23 3.41
232 233 1.271597 CCAACCTCCTTTGGGACTGAG 60.272 57.143 0.00 0.00 42.23 3.35
234 235 1.301293 CCTCCTTTGGGACTGAGGC 59.699 63.158 0.00 0.00 38.12 4.70
235 236 1.301293 CTCCTTTGGGACTGAGGCC 59.699 63.158 0.00 0.00 36.57 5.19
236 237 1.151810 TCCTTTGGGACTGAGGCCT 60.152 57.895 3.86 3.86 36.57 5.19
237 238 1.001641 CCTTTGGGACTGAGGCCTG 60.002 63.158 12.00 0.00 33.58 4.85
238 239 1.676967 CTTTGGGACTGAGGCCTGC 60.677 63.158 12.00 1.89 0.00 4.85
239 240 2.134630 CTTTGGGACTGAGGCCTGCT 62.135 60.000 12.00 0.00 0.00 4.24
240 241 0.840288 TTTGGGACTGAGGCCTGCTA 60.840 55.000 12.00 0.00 0.00 3.49
241 242 1.553690 TTGGGACTGAGGCCTGCTAC 61.554 60.000 12.00 0.00 0.00 3.58
242 243 2.496817 GGACTGAGGCCTGCTACG 59.503 66.667 12.00 0.00 0.00 3.51
243 244 2.352032 GGACTGAGGCCTGCTACGT 61.352 63.158 12.00 0.00 0.00 3.57
244 245 1.139947 GACTGAGGCCTGCTACGTC 59.860 63.158 12.00 5.31 0.00 4.34
245 246 2.103143 CTGAGGCCTGCTACGTCG 59.897 66.667 12.00 0.00 0.00 5.12
246 247 3.417275 CTGAGGCCTGCTACGTCGG 62.417 68.421 12.00 0.00 0.00 4.79
247 248 4.208686 GAGGCCTGCTACGTCGGG 62.209 72.222 12.00 0.00 35.57 5.14
251 252 3.528370 CCTGCTACGTCGGGGGAG 61.528 72.222 0.00 0.00 0.00 4.30
252 253 3.528370 CTGCTACGTCGGGGGAGG 61.528 72.222 0.00 0.00 0.00 4.30
262 263 2.457794 GGGGGAGGGGGTCAACTA 59.542 66.667 0.00 0.00 0.00 2.24
263 264 1.999568 GGGGGAGGGGGTCAACTAC 61.000 68.421 0.00 0.00 0.00 2.73
264 265 1.229723 GGGGAGGGGGTCAACTACA 60.230 63.158 0.00 0.00 0.00 2.74
265 266 0.843343 GGGGAGGGGGTCAACTACAA 60.843 60.000 0.00 0.00 0.00 2.41
266 267 0.327259 GGGAGGGGGTCAACTACAAC 59.673 60.000 0.00 0.00 0.00 3.32
267 268 1.061546 GGAGGGGGTCAACTACAACA 58.938 55.000 0.00 0.00 0.00 3.33
268 269 1.422402 GGAGGGGGTCAACTACAACAA 59.578 52.381 0.00 0.00 0.00 2.83
269 270 2.501261 GAGGGGGTCAACTACAACAAC 58.499 52.381 0.00 0.00 0.00 3.32
270 271 1.847737 AGGGGGTCAACTACAACAACA 59.152 47.619 0.00 0.00 0.00 3.33
271 272 1.951602 GGGGGTCAACTACAACAACAC 59.048 52.381 0.00 0.00 0.00 3.32
272 273 1.951602 GGGGTCAACTACAACAACACC 59.048 52.381 0.00 0.00 0.00 4.16
273 274 1.951602 GGGTCAACTACAACAACACCC 59.048 52.381 0.00 0.00 35.46 4.61
274 275 1.951602 GGTCAACTACAACAACACCCC 59.048 52.381 0.00 0.00 0.00 4.95
275 276 2.422377 GGTCAACTACAACAACACCCCT 60.422 50.000 0.00 0.00 0.00 4.79
276 277 2.876550 GTCAACTACAACAACACCCCTC 59.123 50.000 0.00 0.00 0.00 4.30
277 278 2.158726 TCAACTACAACAACACCCCTCC 60.159 50.000 0.00 0.00 0.00 4.30
278 279 1.815757 ACTACAACAACACCCCTCCT 58.184 50.000 0.00 0.00 0.00 3.69
279 280 1.697982 ACTACAACAACACCCCTCCTC 59.302 52.381 0.00 0.00 0.00 3.71
280 281 1.978580 CTACAACAACACCCCTCCTCT 59.021 52.381 0.00 0.00 0.00 3.69
281 282 0.474184 ACAACAACACCCCTCCTCTG 59.526 55.000 0.00 0.00 0.00 3.35
282 283 0.764890 CAACAACACCCCTCCTCTGA 59.235 55.000 0.00 0.00 0.00 3.27
283 284 1.352352 CAACAACACCCCTCCTCTGAT 59.648 52.381 0.00 0.00 0.00 2.90
284 285 0.987294 ACAACACCCCTCCTCTGATG 59.013 55.000 0.00 0.00 0.00 3.07
285 286 0.393537 CAACACCCCTCCTCTGATGC 60.394 60.000 0.00 0.00 0.00 3.91
286 287 1.566298 AACACCCCTCCTCTGATGCC 61.566 60.000 0.00 0.00 0.00 4.40
287 288 2.367512 ACCCCTCCTCTGATGCCC 60.368 66.667 0.00 0.00 0.00 5.36
288 289 2.367377 CCCCTCCTCTGATGCCCA 60.367 66.667 0.00 0.00 0.00 5.36
289 290 2.750657 CCCCTCCTCTGATGCCCAC 61.751 68.421 0.00 0.00 0.00 4.61
290 291 1.692042 CCCTCCTCTGATGCCCACT 60.692 63.158 0.00 0.00 0.00 4.00
291 292 1.525923 CCTCCTCTGATGCCCACTG 59.474 63.158 0.00 0.00 0.00 3.66
292 293 1.270414 CCTCCTCTGATGCCCACTGT 61.270 60.000 0.00 0.00 0.00 3.55
293 294 1.489481 CTCCTCTGATGCCCACTGTA 58.511 55.000 0.00 0.00 0.00 2.74
294 295 1.411977 CTCCTCTGATGCCCACTGTAG 59.588 57.143 0.00 0.00 0.00 2.74
295 296 1.198713 CCTCTGATGCCCACTGTAGT 58.801 55.000 0.00 0.00 0.00 2.73
296 297 1.137872 CCTCTGATGCCCACTGTAGTC 59.862 57.143 0.00 0.00 0.00 2.59
297 298 1.137872 CTCTGATGCCCACTGTAGTCC 59.862 57.143 0.00 0.00 0.00 3.85
298 299 0.904649 CTGATGCCCACTGTAGTCCA 59.095 55.000 0.00 0.00 0.00 4.02
300 301 0.179000 GATGCCCACTGTAGTCCAGG 59.821 60.000 0.00 0.00 46.06 4.45
301 302 1.915078 ATGCCCACTGTAGTCCAGGC 61.915 60.000 9.28 9.28 46.06 4.85
302 303 2.990479 CCCACTGTAGTCCAGGCC 59.010 66.667 0.00 0.00 46.06 5.19
303 304 1.918293 CCCACTGTAGTCCAGGCCA 60.918 63.158 5.01 0.00 46.06 5.36
304 305 1.274703 CCCACTGTAGTCCAGGCCAT 61.275 60.000 5.01 0.00 46.06 4.40
305 306 0.179000 CCACTGTAGTCCAGGCCATC 59.821 60.000 5.01 0.00 46.06 3.51
306 307 0.904649 CACTGTAGTCCAGGCCATCA 59.095 55.000 5.01 0.00 46.06 3.07
307 308 0.905357 ACTGTAGTCCAGGCCATCAC 59.095 55.000 5.01 0.00 46.06 3.06
308 309 0.179000 CTGTAGTCCAGGCCATCACC 59.821 60.000 5.01 0.00 37.54 4.02
309 310 1.144057 GTAGTCCAGGCCATCACCG 59.856 63.158 5.01 0.00 33.69 4.94
310 311 2.063979 TAGTCCAGGCCATCACCGG 61.064 63.158 5.01 0.00 33.69 5.28
317 318 3.508840 GCCATCACCGGCGGAAAG 61.509 66.667 35.78 21.31 43.52 2.62
318 319 2.267642 CCATCACCGGCGGAAAGA 59.732 61.111 35.78 25.76 0.00 2.52
319 320 1.376683 CCATCACCGGCGGAAAGAA 60.377 57.895 35.78 12.82 0.00 2.52
320 321 1.644786 CCATCACCGGCGGAAAGAAC 61.645 60.000 35.78 0.00 0.00 3.01
321 322 1.376812 ATCACCGGCGGAAAGAACC 60.377 57.895 35.78 0.00 0.00 3.62
322 323 2.814913 ATCACCGGCGGAAAGAACCC 62.815 60.000 35.78 0.00 0.00 4.11
323 324 3.562232 ACCGGCGGAAAGAACCCA 61.562 61.111 35.78 0.00 0.00 4.51
324 325 2.746277 CCGGCGGAAAGAACCCAG 60.746 66.667 24.41 0.00 0.00 4.45
325 326 2.345991 CGGCGGAAAGAACCCAGA 59.654 61.111 0.00 0.00 0.00 3.86
326 327 1.302192 CGGCGGAAAGAACCCAGAA 60.302 57.895 0.00 0.00 0.00 3.02
327 328 1.298859 CGGCGGAAAGAACCCAGAAG 61.299 60.000 0.00 0.00 0.00 2.85
328 329 0.036306 GGCGGAAAGAACCCAGAAGA 59.964 55.000 0.00 0.00 0.00 2.87
329 330 1.544759 GGCGGAAAGAACCCAGAAGAA 60.545 52.381 0.00 0.00 0.00 2.52
330 331 1.535896 GCGGAAAGAACCCAGAAGAAC 59.464 52.381 0.00 0.00 0.00 3.01
331 332 2.152016 CGGAAAGAACCCAGAAGAACC 58.848 52.381 0.00 0.00 0.00 3.62
332 333 2.515854 GGAAAGAACCCAGAAGAACCC 58.484 52.381 0.00 0.00 0.00 4.11
333 334 2.158519 GGAAAGAACCCAGAAGAACCCA 60.159 50.000 0.00 0.00 0.00 4.51
334 335 2.959465 AAGAACCCAGAAGAACCCAG 57.041 50.000 0.00 0.00 0.00 4.45
335 336 0.402121 AGAACCCAGAAGAACCCAGC 59.598 55.000 0.00 0.00 0.00 4.85
336 337 0.110486 GAACCCAGAAGAACCCAGCA 59.890 55.000 0.00 0.00 0.00 4.41
337 338 0.779997 AACCCAGAAGAACCCAGCAT 59.220 50.000 0.00 0.00 0.00 3.79
338 339 0.038744 ACCCAGAAGAACCCAGCATG 59.961 55.000 0.00 0.00 0.00 4.06
351 352 2.835580 CAGCATGGAGTATGAGGGAG 57.164 55.000 0.00 0.00 39.21 4.30
352 353 2.045524 CAGCATGGAGTATGAGGGAGT 58.954 52.381 0.00 0.00 39.21 3.85
353 354 2.036992 CAGCATGGAGTATGAGGGAGTC 59.963 54.545 0.00 0.00 39.21 3.36
354 355 1.346068 GCATGGAGTATGAGGGAGTCC 59.654 57.143 0.00 0.00 39.21 3.85
355 356 1.974236 CATGGAGTATGAGGGAGTCCC 59.026 57.143 21.81 21.81 45.90 4.46
371 372 2.762875 CCGGACTAGGGGGTGTCC 60.763 72.222 0.00 0.00 46.69 4.02
373 374 2.762875 GGACTAGGGGGTGTCCGG 60.763 72.222 0.00 0.00 42.51 5.14
374 375 2.361771 GACTAGGGGGTGTCCGGA 59.638 66.667 0.00 0.00 36.01 5.14
375 376 1.075450 GACTAGGGGGTGTCCGGAT 60.075 63.158 7.81 0.00 36.01 4.18
376 377 0.186873 GACTAGGGGGTGTCCGGATA 59.813 60.000 7.81 0.10 36.01 2.59
377 378 0.187851 ACTAGGGGGTGTCCGGATAG 59.812 60.000 7.81 5.89 36.01 2.08
378 379 0.187851 CTAGGGGGTGTCCGGATAGT 59.812 60.000 7.81 0.00 36.01 2.12
379 380 0.186873 TAGGGGGTGTCCGGATAGTC 59.813 60.000 7.81 0.00 36.01 2.59
380 381 2.496291 GGGGGTGTCCGGATAGTCG 61.496 68.421 7.81 0.00 36.01 4.18
381 382 1.454479 GGGGTGTCCGGATAGTCGA 60.454 63.158 7.81 0.00 0.00 4.20
382 383 1.039233 GGGGTGTCCGGATAGTCGAA 61.039 60.000 7.81 0.00 0.00 3.71
383 384 0.101939 GGGTGTCCGGATAGTCGAAC 59.898 60.000 7.81 0.00 0.00 3.95
384 385 1.101331 GGTGTCCGGATAGTCGAACT 58.899 55.000 7.81 0.00 0.00 3.01
385 386 2.292267 GGTGTCCGGATAGTCGAACTA 58.708 52.381 7.81 0.00 34.82 2.24
386 387 2.032675 GGTGTCCGGATAGTCGAACTAC 59.967 54.545 7.81 0.00 32.84 2.73
387 388 2.032675 GTGTCCGGATAGTCGAACTACC 59.967 54.545 7.81 0.00 32.84 3.18
388 389 2.292267 GTCCGGATAGTCGAACTACCA 58.708 52.381 7.81 0.00 32.84 3.25
389 390 2.883386 GTCCGGATAGTCGAACTACCAT 59.117 50.000 7.81 0.00 32.84 3.55
390 391 3.058363 GTCCGGATAGTCGAACTACCATC 60.058 52.174 7.81 0.00 32.84 3.51
391 392 2.882761 CCGGATAGTCGAACTACCATCA 59.117 50.000 0.00 0.00 32.84 3.07
392 393 3.506455 CCGGATAGTCGAACTACCATCAT 59.494 47.826 0.00 0.00 32.84 2.45
393 394 4.379603 CCGGATAGTCGAACTACCATCATC 60.380 50.000 0.00 0.00 32.84 2.92
394 395 4.669453 CGGATAGTCGAACTACCATCATCG 60.669 50.000 0.00 0.00 32.84 3.84
395 396 4.379603 GGATAGTCGAACTACCATCATCGG 60.380 50.000 0.00 0.00 32.84 4.18
396 397 1.067212 AGTCGAACTACCATCATCGGC 59.933 52.381 0.00 0.00 40.00 5.54
397 398 0.387929 TCGAACTACCATCATCGGCC 59.612 55.000 0.00 0.00 36.05 6.13
398 399 0.939577 CGAACTACCATCATCGGCCG 60.940 60.000 22.12 22.12 0.00 6.13
399 400 0.600255 GAACTACCATCATCGGCCGG 60.600 60.000 27.83 10.69 0.00 6.13
400 401 1.046472 AACTACCATCATCGGCCGGA 61.046 55.000 27.83 16.64 0.00 5.14
401 402 1.006102 CTACCATCATCGGCCGGAC 60.006 63.158 27.83 0.00 0.00 4.79
402 403 1.456892 TACCATCATCGGCCGGACT 60.457 57.895 27.83 7.73 0.00 3.85
403 404 1.461091 TACCATCATCGGCCGGACTC 61.461 60.000 27.83 0.00 0.00 3.36
404 405 2.029666 CATCATCGGCCGGACTCC 59.970 66.667 27.83 0.00 0.00 3.85
405 406 2.443952 ATCATCGGCCGGACTCCA 60.444 61.111 27.83 4.46 0.00 3.86
406 407 2.063979 ATCATCGGCCGGACTCCAA 61.064 57.895 27.83 3.54 0.00 3.53
407 408 2.032860 ATCATCGGCCGGACTCCAAG 62.033 60.000 27.83 0.99 0.00 3.61
408 409 2.363795 ATCGGCCGGACTCCAAGA 60.364 61.111 27.83 1.69 0.00 3.02
409 410 2.722201 ATCGGCCGGACTCCAAGAC 61.722 63.158 27.83 0.00 0.00 3.01
410 411 3.382832 CGGCCGGACTCCAAGACT 61.383 66.667 20.10 0.00 0.00 3.24
411 412 2.050350 CGGCCGGACTCCAAGACTA 61.050 63.158 20.10 0.00 0.00 2.59
412 413 1.392710 CGGCCGGACTCCAAGACTAT 61.393 60.000 20.10 0.00 0.00 2.12
413 414 0.105039 GGCCGGACTCCAAGACTATG 59.895 60.000 5.05 0.00 0.00 2.23
414 415 1.112113 GCCGGACTCCAAGACTATGA 58.888 55.000 5.05 0.00 0.00 2.15
415 416 1.480954 GCCGGACTCCAAGACTATGAA 59.519 52.381 5.05 0.00 0.00 2.57
416 417 2.482142 GCCGGACTCCAAGACTATGAAG 60.482 54.545 5.05 0.00 0.00 3.02
417 418 3.024547 CCGGACTCCAAGACTATGAAGA 58.975 50.000 0.00 0.00 0.00 2.87
418 419 3.639094 CCGGACTCCAAGACTATGAAGAT 59.361 47.826 0.00 0.00 0.00 2.40
419 420 4.827835 CCGGACTCCAAGACTATGAAGATA 59.172 45.833 0.00 0.00 0.00 1.98
420 421 5.278561 CCGGACTCCAAGACTATGAAGATAC 60.279 48.000 0.00 0.00 0.00 2.24
421 422 5.299531 CGGACTCCAAGACTATGAAGATACA 59.700 44.000 0.00 0.00 0.00 2.29
422 423 6.183360 CGGACTCCAAGACTATGAAGATACAA 60.183 42.308 0.00 0.00 0.00 2.41
423 424 7.206687 GGACTCCAAGACTATGAAGATACAAG 58.793 42.308 0.00 0.00 0.00 3.16
424 425 7.068839 GGACTCCAAGACTATGAAGATACAAGA 59.931 40.741 0.00 0.00 0.00 3.02
425 426 8.546083 ACTCCAAGACTATGAAGATACAAGAT 57.454 34.615 0.00 0.00 0.00 2.40
426 427 8.986991 ACTCCAAGACTATGAAGATACAAGATT 58.013 33.333 0.00 0.00 0.00 2.40
427 428 9.258826 CTCCAAGACTATGAAGATACAAGATTG 57.741 37.037 0.00 0.00 0.00 2.67
428 429 8.981659 TCCAAGACTATGAAGATACAAGATTGA 58.018 33.333 0.00 0.00 0.00 2.57
429 430 9.605275 CCAAGACTATGAAGATACAAGATTGAA 57.395 33.333 0.00 0.00 0.00 2.69
436 437 7.818493 TGAAGATACAAGATTGAAGACTTCG 57.182 36.000 10.56 0.00 34.37 3.79
437 438 7.378966 TGAAGATACAAGATTGAAGACTTCGT 58.621 34.615 10.56 1.87 34.37 3.85
438 439 7.542477 TGAAGATACAAGATTGAAGACTTCGTC 59.458 37.037 10.56 10.67 34.37 4.20
439 440 6.334202 AGATACAAGATTGAAGACTTCGTCC 58.666 40.000 10.56 2.18 32.18 4.79
440 441 3.665190 ACAAGATTGAAGACTTCGTCCC 58.335 45.455 10.56 0.53 32.18 4.46
441 442 2.656560 AGATTGAAGACTTCGTCCCG 57.343 50.000 10.56 0.00 32.18 5.14
442 443 1.893801 AGATTGAAGACTTCGTCCCGT 59.106 47.619 10.56 0.00 32.18 5.28
443 444 1.993370 GATTGAAGACTTCGTCCCGTG 59.007 52.381 10.56 0.00 32.18 4.94
444 445 0.748450 TTGAAGACTTCGTCCCGTGT 59.252 50.000 10.56 0.00 32.18 4.49
445 446 0.313043 TGAAGACTTCGTCCCGTGTC 59.687 55.000 10.56 0.00 32.18 3.67
446 447 0.388263 GAAGACTTCGTCCCGTGTCC 60.388 60.000 0.00 0.00 34.39 4.02
447 448 2.126580 GACTTCGTCCCGTGTCCG 60.127 66.667 0.00 0.00 0.00 4.79
461 462 4.910613 TCCGGATGGGACTTTCCT 57.089 55.556 0.00 0.00 40.94 3.36
462 463 3.098445 TCCGGATGGGACTTTCCTT 57.902 52.632 0.00 0.00 40.94 3.36
463 464 0.618458 TCCGGATGGGACTTTCCTTG 59.382 55.000 0.00 0.00 40.94 3.61
464 465 0.394352 CCGGATGGGACTTTCCTTGG 60.394 60.000 0.00 0.00 38.47 3.61
465 466 1.032114 CGGATGGGACTTTCCTTGGC 61.032 60.000 0.00 0.00 36.57 4.52
466 467 1.032114 GGATGGGACTTTCCTTGGCG 61.032 60.000 0.00 0.00 36.57 5.69
467 468 0.322546 GATGGGACTTTCCTTGGCGT 60.323 55.000 0.00 0.00 36.57 5.68
468 469 0.609131 ATGGGACTTTCCTTGGCGTG 60.609 55.000 0.00 0.00 36.57 5.34
469 470 1.971695 GGGACTTTCCTTGGCGTGG 60.972 63.158 0.00 0.00 36.57 4.94
470 471 1.072505 GGACTTTCCTTGGCGTGGA 59.927 57.895 0.00 0.00 32.53 4.02
471 472 0.536460 GGACTTTCCTTGGCGTGGAA 60.536 55.000 6.88 6.88 41.33 3.53
472 473 0.875059 GACTTTCCTTGGCGTGGAAG 59.125 55.000 10.20 8.04 43.48 3.46
473 474 0.537371 ACTTTCCTTGGCGTGGAAGG 60.537 55.000 15.33 15.33 43.48 3.46
482 483 2.956987 CGTGGAAGGCAAGCTTGG 59.043 61.111 27.10 9.80 0.00 3.61
489 490 2.709475 GGCAAGCTTGGCGATACG 59.291 61.111 33.68 4.49 43.97 3.06
490 491 2.709475 GCAAGCTTGGCGATACGG 59.291 61.111 27.10 0.00 0.00 4.02
491 492 1.813753 GCAAGCTTGGCGATACGGA 60.814 57.895 27.10 0.00 0.00 4.69
492 493 1.160329 GCAAGCTTGGCGATACGGAT 61.160 55.000 27.10 0.00 0.00 4.18
493 494 1.872237 GCAAGCTTGGCGATACGGATA 60.872 52.381 27.10 0.00 0.00 2.59
494 495 2.688507 CAAGCTTGGCGATACGGATAT 58.311 47.619 19.14 0.00 0.00 1.63
495 496 2.370281 AGCTTGGCGATACGGATATG 57.630 50.000 0.00 0.00 0.00 1.78
496 497 1.618837 AGCTTGGCGATACGGATATGT 59.381 47.619 0.00 0.00 0.00 2.29
497 498 2.823747 AGCTTGGCGATACGGATATGTA 59.176 45.455 0.00 0.00 0.00 2.29
498 499 3.119459 AGCTTGGCGATACGGATATGTAG 60.119 47.826 0.00 0.00 0.00 2.74
499 500 3.119602 GCTTGGCGATACGGATATGTAGA 60.120 47.826 0.00 0.00 0.00 2.59
500 501 4.440250 GCTTGGCGATACGGATATGTAGAT 60.440 45.833 0.00 0.00 0.00 1.98
501 502 4.895224 TGGCGATACGGATATGTAGATC 57.105 45.455 0.00 0.00 0.00 2.75
502 503 4.524053 TGGCGATACGGATATGTAGATCT 58.476 43.478 0.00 0.00 0.00 2.75
503 504 4.575236 TGGCGATACGGATATGTAGATCTC 59.425 45.833 0.00 0.00 0.00 2.75
504 505 4.023878 GGCGATACGGATATGTAGATCTCC 60.024 50.000 0.00 0.00 0.00 3.71
505 506 4.817464 GCGATACGGATATGTAGATCTCCT 59.183 45.833 0.00 0.00 0.00 3.69
506 507 5.990386 GCGATACGGATATGTAGATCTCCTA 59.010 44.000 0.00 0.00 0.00 2.94
507 508 6.073657 GCGATACGGATATGTAGATCTCCTAC 60.074 46.154 0.00 0.00 46.21 3.18
508 509 6.424509 CGATACGGATATGTAGATCTCCTACC 59.575 46.154 0.00 0.00 45.60 3.18
509 510 5.516059 ACGGATATGTAGATCTCCTACCA 57.484 43.478 0.00 0.00 45.60 3.25
510 511 6.080969 ACGGATATGTAGATCTCCTACCAT 57.919 41.667 0.00 0.00 45.60 3.55
511 512 6.494952 ACGGATATGTAGATCTCCTACCATT 58.505 40.000 0.00 0.00 45.60 3.16
512 513 6.378564 ACGGATATGTAGATCTCCTACCATTG 59.621 42.308 0.00 0.00 45.60 2.82
513 514 6.378564 CGGATATGTAGATCTCCTACCATTGT 59.621 42.308 0.00 0.00 45.60 2.71
514 515 7.556635 CGGATATGTAGATCTCCTACCATTGTA 59.443 40.741 0.00 0.00 45.60 2.41
515 516 9.256228 GGATATGTAGATCTCCTACCATTGTAA 57.744 37.037 0.00 0.00 45.60 2.41
517 518 6.726490 TGTAGATCTCCTACCATTGTAACC 57.274 41.667 0.00 0.00 45.60 2.85
518 519 4.939052 AGATCTCCTACCATTGTAACCG 57.061 45.455 0.00 0.00 0.00 4.44
519 520 4.543689 AGATCTCCTACCATTGTAACCGA 58.456 43.478 0.00 0.00 0.00 4.69
520 521 4.341520 AGATCTCCTACCATTGTAACCGAC 59.658 45.833 0.00 0.00 0.00 4.79
521 522 3.705051 TCTCCTACCATTGTAACCGACT 58.295 45.455 0.00 0.00 0.00 4.18
522 523 3.698040 TCTCCTACCATTGTAACCGACTC 59.302 47.826 0.00 0.00 0.00 3.36
523 524 3.700038 CTCCTACCATTGTAACCGACTCT 59.300 47.826 0.00 0.00 0.00 3.24
524 525 3.446161 TCCTACCATTGTAACCGACTCTG 59.554 47.826 0.00 0.00 0.00 3.35
525 526 3.194968 CCTACCATTGTAACCGACTCTGT 59.805 47.826 0.00 0.00 0.00 3.41
526 527 3.040147 ACCATTGTAACCGACTCTGTG 57.960 47.619 0.00 0.00 0.00 3.66
527 528 2.367567 ACCATTGTAACCGACTCTGTGT 59.632 45.455 0.00 0.00 0.00 3.72
528 529 3.575256 ACCATTGTAACCGACTCTGTGTA 59.425 43.478 0.00 0.00 0.00 2.90
529 530 4.039488 ACCATTGTAACCGACTCTGTGTAA 59.961 41.667 0.00 0.00 0.00 2.41
530 531 4.387862 CCATTGTAACCGACTCTGTGTAAC 59.612 45.833 0.00 0.00 37.35 2.50
531 532 3.648339 TGTAACCGACTCTGTGTAACC 57.352 47.619 0.00 0.00 34.36 2.85
532 533 2.297033 TGTAACCGACTCTGTGTAACCC 59.703 50.000 0.00 0.00 34.36 4.11
533 534 1.713297 AACCGACTCTGTGTAACCCT 58.287 50.000 0.00 0.00 34.36 4.34
534 535 2.592102 ACCGACTCTGTGTAACCCTA 57.408 50.000 0.00 0.00 34.36 3.53
535 536 2.444421 ACCGACTCTGTGTAACCCTAG 58.556 52.381 0.00 0.00 34.36 3.02
536 537 1.134560 CCGACTCTGTGTAACCCTAGC 59.865 57.143 0.00 0.00 34.36 3.42
537 538 1.134560 CGACTCTGTGTAACCCTAGCC 59.865 57.143 0.00 0.00 34.36 3.93
538 539 1.481363 GACTCTGTGTAACCCTAGCCC 59.519 57.143 0.00 0.00 34.36 5.19
539 540 1.078989 ACTCTGTGTAACCCTAGCCCT 59.921 52.381 0.00 0.00 34.36 5.19
540 541 1.757699 CTCTGTGTAACCCTAGCCCTC 59.242 57.143 0.00 0.00 34.36 4.30
541 542 1.361543 TCTGTGTAACCCTAGCCCTCT 59.638 52.381 0.00 0.00 34.36 3.69
542 543 1.757699 CTGTGTAACCCTAGCCCTCTC 59.242 57.143 0.00 0.00 34.36 3.20
543 544 1.121378 GTGTAACCCTAGCCCTCTCC 58.879 60.000 0.00 0.00 0.00 3.71
544 545 0.396695 TGTAACCCTAGCCCTCTCCG 60.397 60.000 0.00 0.00 0.00 4.63
545 546 1.114119 GTAACCCTAGCCCTCTCCGG 61.114 65.000 0.00 0.00 0.00 5.14
546 547 1.587522 TAACCCTAGCCCTCTCCGGT 61.588 60.000 0.00 0.00 0.00 5.28
547 548 2.840102 CCCTAGCCCTCTCCGGTG 60.840 72.222 0.00 0.00 0.00 4.94
548 549 2.042843 CCTAGCCCTCTCCGGTGT 60.043 66.667 0.00 0.00 0.00 4.16
549 550 2.128507 CCTAGCCCTCTCCGGTGTC 61.129 68.421 0.00 0.00 0.00 3.67
550 551 1.076632 CTAGCCCTCTCCGGTGTCT 60.077 63.158 0.00 0.00 0.00 3.41
551 552 0.183014 CTAGCCCTCTCCGGTGTCTA 59.817 60.000 0.00 0.05 0.00 2.59
552 553 0.851469 TAGCCCTCTCCGGTGTCTAT 59.149 55.000 0.00 0.00 0.00 1.98
553 554 0.851469 AGCCCTCTCCGGTGTCTATA 59.149 55.000 0.00 0.00 0.00 1.31
554 555 1.429687 AGCCCTCTCCGGTGTCTATAT 59.570 52.381 0.00 0.00 0.00 0.86
555 556 2.648304 AGCCCTCTCCGGTGTCTATATA 59.352 50.000 0.00 0.00 0.00 0.86
556 557 3.075582 AGCCCTCTCCGGTGTCTATATAA 59.924 47.826 0.00 0.00 0.00 0.98
557 558 3.830755 GCCCTCTCCGGTGTCTATATAAA 59.169 47.826 0.00 0.00 0.00 1.40
558 559 4.321824 GCCCTCTCCGGTGTCTATATAAAC 60.322 50.000 0.00 0.00 0.00 2.01
559 560 4.220163 CCCTCTCCGGTGTCTATATAAACC 59.780 50.000 0.00 0.68 0.00 3.27
1118 1133 4.932200 GGTTAGATCTGTGTTCTTGACCAG 59.068 45.833 5.18 0.00 32.62 4.00
1121 1136 5.808366 AGATCTGTGTTCTTGACCAGTTA 57.192 39.130 0.00 0.00 32.03 2.24
1587 1603 4.800764 GGGGTGCCCAGTAGTCTA 57.199 61.111 9.76 0.00 44.65 2.59
1595 1611 3.447944 GTGCCCAGTAGTCTAAGTTAGCT 59.552 47.826 4.93 8.25 0.00 3.32
1680 1696 4.251169 TGATATTCTCAGGGGCCCTATTT 58.749 43.478 28.28 10.43 29.64 1.40
1695 1711 5.454755 GGCCCTATTTAGTGTTCATGCTCTA 60.455 44.000 0.00 0.00 0.00 2.43
1832 1852 7.180051 TGAGAAAATAACCATGCCCAAAATAGT 59.820 33.333 0.00 0.00 0.00 2.12
1897 1917 1.073923 CACCAGCCCACCTCTAACTTT 59.926 52.381 0.00 0.00 0.00 2.66
1899 1919 1.073923 CCAGCCCACCTCTAACTTTGT 59.926 52.381 0.00 0.00 0.00 2.83
2136 2178 5.585844 GGTTTGGCCAATATTTTGAAGATGG 59.414 40.000 21.26 0.00 34.60 3.51
2137 2179 6.172630 GTTTGGCCAATATTTTGAAGATGGT 58.827 36.000 21.26 0.00 34.60 3.55
2138 2180 5.341872 TGGCCAATATTTTGAAGATGGTG 57.658 39.130 0.61 0.00 34.60 4.17
2139 2181 4.776837 TGGCCAATATTTTGAAGATGGTGT 59.223 37.500 0.61 0.00 34.60 4.16
2212 2258 1.933853 CTCGTAGCAACCCATAGCAAC 59.066 52.381 0.00 0.00 0.00 4.17
2504 2559 2.112297 GGGAACAACGCCACCTCA 59.888 61.111 0.00 0.00 0.00 3.86
2510 2565 1.071471 CAACGCCACCTCACTCCTT 59.929 57.895 0.00 0.00 0.00 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.039764 ACTCCACATCCGACCTCTGA 59.960 55.000 0.00 0.00 0.00 3.27
2 3 0.039764 TCACTCCACATCCGACCTCT 59.960 55.000 0.00 0.00 0.00 3.69
6 7 1.272490 TGTTCTCACTCCACATCCGAC 59.728 52.381 0.00 0.00 0.00 4.79
7 8 1.627864 TGTTCTCACTCCACATCCGA 58.372 50.000 0.00 0.00 0.00 4.55
8 9 2.069273 GTTGTTCTCACTCCACATCCG 58.931 52.381 0.00 0.00 0.00 4.18
9 10 2.069273 CGTTGTTCTCACTCCACATCC 58.931 52.381 0.00 0.00 0.00 3.51
10 11 1.461127 GCGTTGTTCTCACTCCACATC 59.539 52.381 0.00 0.00 0.00 3.06
11 12 1.512926 GCGTTGTTCTCACTCCACAT 58.487 50.000 0.00 0.00 0.00 3.21
12 13 0.531974 GGCGTTGTTCTCACTCCACA 60.532 55.000 0.00 0.00 0.00 4.17
13 14 0.531974 TGGCGTTGTTCTCACTCCAC 60.532 55.000 0.00 0.00 0.00 4.02
14 15 0.531974 GTGGCGTTGTTCTCACTCCA 60.532 55.000 0.00 0.00 0.00 3.86
15 16 1.228657 GGTGGCGTTGTTCTCACTCC 61.229 60.000 0.00 0.00 0.00 3.85
16 17 0.531974 TGGTGGCGTTGTTCTCACTC 60.532 55.000 0.00 0.00 0.00 3.51
17 18 0.107410 TTGGTGGCGTTGTTCTCACT 60.107 50.000 0.00 0.00 0.00 3.41
18 19 0.307760 CTTGGTGGCGTTGTTCTCAC 59.692 55.000 0.00 0.00 0.00 3.51
19 20 0.817634 CCTTGGTGGCGTTGTTCTCA 60.818 55.000 0.00 0.00 0.00 3.27
20 21 1.949257 CCTTGGTGGCGTTGTTCTC 59.051 57.895 0.00 0.00 0.00 2.87
21 22 4.157607 CCTTGGTGGCGTTGTTCT 57.842 55.556 0.00 0.00 0.00 3.01
31 32 3.371063 CTGCTGCCAGCCTTGGTG 61.371 66.667 15.29 0.00 46.80 4.17
32 33 1.565390 TATCTGCTGCCAGCCTTGGT 61.565 55.000 15.29 3.35 46.80 3.67
34 35 0.818445 CCTATCTGCTGCCAGCCTTG 60.818 60.000 15.29 4.67 41.51 3.61
35 36 1.277580 ACCTATCTGCTGCCAGCCTT 61.278 55.000 15.29 1.12 41.51 4.35
36 37 1.277580 AACCTATCTGCTGCCAGCCT 61.278 55.000 15.29 1.31 41.51 4.58
37 38 0.394899 AAACCTATCTGCTGCCAGCC 60.395 55.000 15.29 0.00 41.51 4.85
38 39 0.737219 CAAACCTATCTGCTGCCAGC 59.263 55.000 10.45 10.45 42.82 4.85
39 40 1.340405 ACCAAACCTATCTGCTGCCAG 60.340 52.381 0.00 0.00 40.54 4.85
40 41 0.698238 ACCAAACCTATCTGCTGCCA 59.302 50.000 0.00 0.00 0.00 4.92
41 42 1.098050 CACCAAACCTATCTGCTGCC 58.902 55.000 0.00 0.00 0.00 4.85
42 43 2.012673 CTCACCAAACCTATCTGCTGC 58.987 52.381 0.00 0.00 0.00 5.25
43 44 3.616956 TCTCACCAAACCTATCTGCTG 57.383 47.619 0.00 0.00 0.00 4.41
44 45 3.135530 GGATCTCACCAAACCTATCTGCT 59.864 47.826 0.00 0.00 0.00 4.24
45 46 3.471680 GGATCTCACCAAACCTATCTGC 58.528 50.000 0.00 0.00 0.00 4.26
46 47 3.713764 AGGGATCTCACCAAACCTATCTG 59.286 47.826 0.00 0.00 0.00 2.90
47 48 3.713764 CAGGGATCTCACCAAACCTATCT 59.286 47.826 0.00 0.00 0.00 1.98
48 49 3.711704 TCAGGGATCTCACCAAACCTATC 59.288 47.826 0.00 0.00 0.00 2.08
49 50 3.736094 TCAGGGATCTCACCAAACCTAT 58.264 45.455 0.00 0.00 0.00 2.57
50 51 3.199442 TCAGGGATCTCACCAAACCTA 57.801 47.619 0.00 0.00 0.00 3.08
51 52 2.044793 TCAGGGATCTCACCAAACCT 57.955 50.000 0.00 0.00 0.00 3.50
52 53 2.239654 TCATCAGGGATCTCACCAAACC 59.760 50.000 0.00 0.00 0.00 3.27
53 54 3.634397 TCATCAGGGATCTCACCAAAC 57.366 47.619 0.00 0.00 0.00 2.93
54 55 3.588842 ACTTCATCAGGGATCTCACCAAA 59.411 43.478 0.00 0.00 0.00 3.28
55 56 3.054875 CACTTCATCAGGGATCTCACCAA 60.055 47.826 0.00 0.00 0.00 3.67
56 57 2.502947 CACTTCATCAGGGATCTCACCA 59.497 50.000 0.00 0.00 0.00 4.17
57 58 2.744494 GCACTTCATCAGGGATCTCACC 60.744 54.545 0.00 0.00 0.00 4.02
58 59 2.170187 AGCACTTCATCAGGGATCTCAC 59.830 50.000 0.00 0.00 0.00 3.51
59 60 2.169978 CAGCACTTCATCAGGGATCTCA 59.830 50.000 0.00 0.00 0.00 3.27
60 61 2.485124 CCAGCACTTCATCAGGGATCTC 60.485 54.545 0.00 0.00 0.00 2.75
61 62 1.489649 CCAGCACTTCATCAGGGATCT 59.510 52.381 0.00 0.00 0.00 2.75
62 63 1.964552 CCAGCACTTCATCAGGGATC 58.035 55.000 0.00 0.00 0.00 3.36
63 64 0.106819 GCCAGCACTTCATCAGGGAT 60.107 55.000 0.00 0.00 0.00 3.85
64 65 1.300963 GCCAGCACTTCATCAGGGA 59.699 57.895 0.00 0.00 0.00 4.20
65 66 1.001764 TGCCAGCACTTCATCAGGG 60.002 57.895 0.00 0.00 0.00 4.45
66 67 0.035725 TCTGCCAGCACTTCATCAGG 60.036 55.000 0.00 0.00 0.00 3.86
67 68 1.085091 GTCTGCCAGCACTTCATCAG 58.915 55.000 0.00 0.00 0.00 2.90
68 69 0.321919 GGTCTGCCAGCACTTCATCA 60.322 55.000 0.00 0.00 34.09 3.07
69 70 1.028868 GGGTCTGCCAGCACTTCATC 61.029 60.000 0.00 0.00 36.17 2.92
70 71 1.001641 GGGTCTGCCAGCACTTCAT 60.002 57.895 0.00 0.00 36.17 2.57
71 72 2.431683 GGGTCTGCCAGCACTTCA 59.568 61.111 0.00 0.00 36.17 3.02
72 73 2.743928 CGGGTCTGCCAGCACTTC 60.744 66.667 0.00 0.00 36.17 3.01
73 74 3.241530 TCGGGTCTGCCAGCACTT 61.242 61.111 0.00 0.00 36.17 3.16
74 75 4.008933 GTCGGGTCTGCCAGCACT 62.009 66.667 0.00 0.00 36.17 4.40
75 76 4.314440 TGTCGGGTCTGCCAGCAC 62.314 66.667 0.00 0.00 36.17 4.40
76 77 4.007644 CTGTCGGGTCTGCCAGCA 62.008 66.667 0.00 0.00 36.17 4.41
77 78 4.008933 ACTGTCGGGTCTGCCAGC 62.009 66.667 0.00 0.00 36.17 4.85
78 79 2.047844 CACTGTCGGGTCTGCCAG 60.048 66.667 0.00 0.00 36.17 4.85
79 80 4.314440 GCACTGTCGGGTCTGCCA 62.314 66.667 0.00 0.00 36.17 4.92
80 81 4.314440 TGCACTGTCGGGTCTGCC 62.314 66.667 0.00 0.00 0.00 4.85
81 82 2.740055 CTGCACTGTCGGGTCTGC 60.740 66.667 0.00 0.00 0.00 4.26
82 83 2.047844 CCTGCACTGTCGGGTCTG 60.048 66.667 0.00 0.00 0.00 3.51
83 84 4.008933 GCCTGCACTGTCGGGTCT 62.009 66.667 6.87 0.00 34.92 3.85
84 85 2.646175 TAGCCTGCACTGTCGGGTC 61.646 63.158 0.00 1.59 34.92 4.46
85 86 2.603473 TAGCCTGCACTGTCGGGT 60.603 61.111 0.00 0.00 34.92 5.28
86 87 2.125512 GTAGCCTGCACTGTCGGG 60.126 66.667 0.00 2.02 35.57 5.14
87 88 2.284798 ATCGTAGCCTGCACTGTCGG 62.285 60.000 0.00 0.00 0.00 4.79
88 89 0.867753 GATCGTAGCCTGCACTGTCG 60.868 60.000 0.00 0.00 0.00 4.35
89 90 0.867753 CGATCGTAGCCTGCACTGTC 60.868 60.000 7.03 0.00 0.00 3.51
90 91 1.139734 CGATCGTAGCCTGCACTGT 59.860 57.895 7.03 0.00 0.00 3.55
91 92 2.233654 GCGATCGTAGCCTGCACTG 61.234 63.158 17.81 0.00 0.00 3.66
92 93 2.105128 GCGATCGTAGCCTGCACT 59.895 61.111 17.81 0.00 0.00 4.40
93 94 2.105128 AGCGATCGTAGCCTGCAC 59.895 61.111 17.81 0.00 34.64 4.57
94 95 2.104928 CAGCGATCGTAGCCTGCA 59.895 61.111 17.81 0.00 34.64 4.41
95 96 3.333969 GCAGCGATCGTAGCCTGC 61.334 66.667 23.30 23.30 33.97 4.85
96 97 3.026879 CGCAGCGATCGTAGCCTG 61.027 66.667 22.09 18.20 34.64 4.85
97 98 4.271816 CCGCAGCGATCGTAGCCT 62.272 66.667 18.75 7.59 34.64 4.58
98 99 4.570663 ACCGCAGCGATCGTAGCC 62.571 66.667 18.75 5.50 34.64 3.93
99 100 3.025176 GACCGCAGCGATCGTAGC 61.025 66.667 18.75 18.79 0.00 3.58
100 101 1.655654 CTGACCGCAGCGATCGTAG 60.656 63.158 18.75 10.63 34.95 3.51
101 102 2.404186 ACTGACCGCAGCGATCGTA 61.404 57.895 18.75 0.00 46.26 3.43
102 103 3.749064 ACTGACCGCAGCGATCGT 61.749 61.111 18.75 8.70 46.26 3.73
103 104 3.250323 CACTGACCGCAGCGATCG 61.250 66.667 18.75 11.69 46.26 3.69
104 105 3.558411 GCACTGACCGCAGCGATC 61.558 66.667 18.75 10.09 46.26 3.69
108 109 3.503363 GATGGCACTGACCGCAGC 61.503 66.667 0.00 0.00 46.26 5.25
110 111 0.608856 ATTTGATGGCACTGACCGCA 60.609 50.000 0.00 0.00 0.00 5.69
111 112 0.527565 AATTTGATGGCACTGACCGC 59.472 50.000 0.00 0.00 0.00 5.68
112 113 1.135315 CCAATTTGATGGCACTGACCG 60.135 52.381 0.00 0.00 32.78 4.79
113 114 1.205417 CCCAATTTGATGGCACTGACC 59.795 52.381 0.00 0.00 39.26 4.02
114 115 2.094545 GTCCCAATTTGATGGCACTGAC 60.095 50.000 0.00 0.00 39.26 3.51
115 116 2.170166 GTCCCAATTTGATGGCACTGA 58.830 47.619 0.00 0.00 39.26 3.41
116 117 1.205417 GGTCCCAATTTGATGGCACTG 59.795 52.381 0.00 0.00 39.26 3.66
117 118 1.203162 TGGTCCCAATTTGATGGCACT 60.203 47.619 0.00 0.00 39.26 4.40
118 119 1.205417 CTGGTCCCAATTTGATGGCAC 59.795 52.381 0.00 0.00 39.26 5.01
119 120 1.559368 CTGGTCCCAATTTGATGGCA 58.441 50.000 0.00 0.00 39.26 4.92
120 121 0.826062 CCTGGTCCCAATTTGATGGC 59.174 55.000 0.00 0.00 39.26 4.40
121 122 0.826062 GCCTGGTCCCAATTTGATGG 59.174 55.000 0.00 0.00 40.35 3.51
122 123 0.457035 CGCCTGGTCCCAATTTGATG 59.543 55.000 0.00 0.00 0.00 3.07
123 124 0.331278 TCGCCTGGTCCCAATTTGAT 59.669 50.000 0.00 0.00 0.00 2.57
124 125 0.331278 ATCGCCTGGTCCCAATTTGA 59.669 50.000 0.00 0.00 0.00 2.69
125 126 0.457035 CATCGCCTGGTCCCAATTTG 59.543 55.000 0.00 0.00 0.00 2.32
126 127 0.684153 CCATCGCCTGGTCCCAATTT 60.684 55.000 0.00 0.00 40.49 1.82
127 128 1.076777 CCATCGCCTGGTCCCAATT 60.077 57.895 0.00 0.00 40.49 2.32
128 129 2.597340 CCATCGCCTGGTCCCAAT 59.403 61.111 0.00 0.00 40.49 3.16
136 137 0.749091 TGGAGATTTGCCATCGCCTG 60.749 55.000 14.37 0.00 38.57 4.85
137 138 0.034186 TTGGAGATTTGCCATCGCCT 60.034 50.000 14.37 0.00 38.57 5.52
138 139 0.383231 CTTGGAGATTTGCCATCGCC 59.617 55.000 8.37 8.37 38.30 5.54
139 140 0.248784 GCTTGGAGATTTGCCATCGC 60.249 55.000 0.00 0.00 34.90 4.58
140 141 1.097232 TGCTTGGAGATTTGCCATCG 58.903 50.000 0.00 0.00 34.90 3.84
141 142 1.820519 TGTGCTTGGAGATTTGCCATC 59.179 47.619 0.00 0.00 34.90 3.51
142 143 1.547372 GTGTGCTTGGAGATTTGCCAT 59.453 47.619 0.00 0.00 34.90 4.40
143 144 0.961019 GTGTGCTTGGAGATTTGCCA 59.039 50.000 0.00 0.00 0.00 4.92
144 145 0.244721 GGTGTGCTTGGAGATTTGCC 59.755 55.000 0.00 0.00 0.00 4.52
145 146 0.109597 CGGTGTGCTTGGAGATTTGC 60.110 55.000 0.00 0.00 0.00 3.68
146 147 0.109597 GCGGTGTGCTTGGAGATTTG 60.110 55.000 0.00 0.00 41.73 2.32
147 148 1.244019 GGCGGTGTGCTTGGAGATTT 61.244 55.000 0.00 0.00 45.43 2.17
148 149 1.675641 GGCGGTGTGCTTGGAGATT 60.676 57.895 0.00 0.00 45.43 2.40
149 150 2.045926 GGCGGTGTGCTTGGAGAT 60.046 61.111 0.00 0.00 45.43 2.75
150 151 3.555324 TGGCGGTGTGCTTGGAGA 61.555 61.111 0.00 0.00 45.43 3.71
151 152 3.357079 GTGGCGGTGTGCTTGGAG 61.357 66.667 0.00 0.00 45.43 3.86
158 159 4.622456 GGTTTGCGTGGCGGTGTG 62.622 66.667 0.00 0.00 0.00 3.82
163 164 4.025401 GACTGGGTTTGCGTGGCG 62.025 66.667 0.00 0.00 0.00 5.69
164 165 2.594592 AGACTGGGTTTGCGTGGC 60.595 61.111 0.00 0.00 0.00 5.01
165 166 2.260869 CCAGACTGGGTTTGCGTGG 61.261 63.158 14.26 0.00 32.67 4.94
166 167 1.227823 TCCAGACTGGGTTTGCGTG 60.228 57.895 21.56 0.00 38.32 5.34
167 168 1.071471 CTCCAGACTGGGTTTGCGT 59.929 57.895 21.56 0.00 38.32 5.24
168 169 1.672356 CCTCCAGACTGGGTTTGCG 60.672 63.158 21.56 3.72 38.32 4.85
169 170 0.110486 TTCCTCCAGACTGGGTTTGC 59.890 55.000 21.56 0.00 38.32 3.68
170 171 1.699634 TCTTCCTCCAGACTGGGTTTG 59.300 52.381 21.56 9.24 38.32 2.93
171 172 1.981495 CTCTTCCTCCAGACTGGGTTT 59.019 52.381 21.56 0.00 38.32 3.27
172 173 1.650528 CTCTTCCTCCAGACTGGGTT 58.349 55.000 21.56 0.00 38.32 4.11
173 174 0.252467 CCTCTTCCTCCAGACTGGGT 60.252 60.000 21.56 0.00 38.32 4.51
174 175 0.980231 CCCTCTTCCTCCAGACTGGG 60.980 65.000 21.56 11.77 38.32 4.45
175 176 0.980231 CCCCTCTTCCTCCAGACTGG 60.980 65.000 15.99 15.99 39.43 4.00
176 177 0.252467 ACCCCTCTTCCTCCAGACTG 60.252 60.000 0.00 0.00 0.00 3.51
177 178 0.041982 GACCCCTCTTCCTCCAGACT 59.958 60.000 0.00 0.00 0.00 3.24
178 179 0.252284 TGACCCCTCTTCCTCCAGAC 60.252 60.000 0.00 0.00 0.00 3.51
179 180 0.491823 TTGACCCCTCTTCCTCCAGA 59.508 55.000 0.00 0.00 0.00 3.86
180 181 1.003696 GTTTGACCCCTCTTCCTCCAG 59.996 57.143 0.00 0.00 0.00 3.86
181 182 1.064825 GTTTGACCCCTCTTCCTCCA 58.935 55.000 0.00 0.00 0.00 3.86
182 183 1.064825 TGTTTGACCCCTCTTCCTCC 58.935 55.000 0.00 0.00 0.00 4.30
183 184 1.271434 GGTGTTTGACCCCTCTTCCTC 60.271 57.143 0.00 0.00 39.10 3.71
184 185 0.771755 GGTGTTTGACCCCTCTTCCT 59.228 55.000 0.00 0.00 39.10 3.36
185 186 0.476771 TGGTGTTTGACCCCTCTTCC 59.523 55.000 0.00 0.00 45.45 3.46
186 187 1.954382 GTTGGTGTTTGACCCCTCTTC 59.046 52.381 0.00 0.00 45.45 2.87
187 188 1.286553 TGTTGGTGTTTGACCCCTCTT 59.713 47.619 0.00 0.00 45.45 2.85
188 189 0.923358 TGTTGGTGTTTGACCCCTCT 59.077 50.000 0.00 0.00 45.45 3.69
189 190 1.770294 TTGTTGGTGTTTGACCCCTC 58.230 50.000 0.00 0.00 45.45 4.30
190 191 2.239681 TTTGTTGGTGTTTGACCCCT 57.760 45.000 0.00 0.00 45.45 4.79
191 192 2.224185 GGATTTGTTGGTGTTTGACCCC 60.224 50.000 0.00 0.00 45.45 4.95
192 193 2.224185 GGGATTTGTTGGTGTTTGACCC 60.224 50.000 0.00 0.00 45.45 4.46
193 194 2.432510 TGGGATTTGTTGGTGTTTGACC 59.567 45.455 0.00 0.00 46.37 4.02
194 195 3.810310 TGGGATTTGTTGGTGTTTGAC 57.190 42.857 0.00 0.00 0.00 3.18
195 196 3.118592 GGTTGGGATTTGTTGGTGTTTGA 60.119 43.478 0.00 0.00 0.00 2.69
196 197 3.118445 AGGTTGGGATTTGTTGGTGTTTG 60.118 43.478 0.00 0.00 0.00 2.93
197 198 3.111484 AGGTTGGGATTTGTTGGTGTTT 58.889 40.909 0.00 0.00 0.00 2.83
198 199 2.698274 GAGGTTGGGATTTGTTGGTGTT 59.302 45.455 0.00 0.00 0.00 3.32
199 200 2.316108 GAGGTTGGGATTTGTTGGTGT 58.684 47.619 0.00 0.00 0.00 4.16
200 201 1.618343 GGAGGTTGGGATTTGTTGGTG 59.382 52.381 0.00 0.00 0.00 4.17
201 202 1.503347 AGGAGGTTGGGATTTGTTGGT 59.497 47.619 0.00 0.00 0.00 3.67
202 203 2.309136 AGGAGGTTGGGATTTGTTGG 57.691 50.000 0.00 0.00 0.00 3.77
203 204 3.244181 CCAAAGGAGGTTGGGATTTGTTG 60.244 47.826 0.00 0.00 43.79 3.33
204 205 2.972021 CCAAAGGAGGTTGGGATTTGTT 59.028 45.455 0.00 0.00 43.79 2.83
205 206 2.608623 CCAAAGGAGGTTGGGATTTGT 58.391 47.619 0.00 0.00 43.79 2.83
212 213 0.771127 TCAGTCCCAAAGGAGGTTGG 59.229 55.000 0.00 0.00 45.21 3.77
213 214 1.271597 CCTCAGTCCCAAAGGAGGTTG 60.272 57.143 0.00 0.00 45.21 3.77
214 215 1.068121 CCTCAGTCCCAAAGGAGGTT 58.932 55.000 0.00 0.00 45.21 3.50
215 216 1.492993 GCCTCAGTCCCAAAGGAGGT 61.493 60.000 8.21 0.00 46.84 3.85
216 217 1.301293 GCCTCAGTCCCAAAGGAGG 59.699 63.158 0.00 0.00 45.21 4.30
217 218 1.204113 AGGCCTCAGTCCCAAAGGAG 61.204 60.000 0.00 0.00 45.21 3.69
218 219 1.151810 AGGCCTCAGTCCCAAAGGA 60.152 57.895 0.00 0.00 41.08 3.36
219 220 1.001641 CAGGCCTCAGTCCCAAAGG 60.002 63.158 0.00 0.00 0.00 3.11
220 221 1.676967 GCAGGCCTCAGTCCCAAAG 60.677 63.158 0.00 0.00 0.00 2.77
221 222 0.840288 TAGCAGGCCTCAGTCCCAAA 60.840 55.000 0.00 0.00 0.00 3.28
222 223 1.229496 TAGCAGGCCTCAGTCCCAA 60.229 57.895 0.00 0.00 0.00 4.12
223 224 1.990060 GTAGCAGGCCTCAGTCCCA 60.990 63.158 0.00 0.00 0.00 4.37
224 225 2.904131 GTAGCAGGCCTCAGTCCC 59.096 66.667 0.00 0.00 0.00 4.46
225 226 2.286127 GACGTAGCAGGCCTCAGTCC 62.286 65.000 0.00 0.00 0.00 3.85
226 227 1.139947 GACGTAGCAGGCCTCAGTC 59.860 63.158 0.00 4.48 0.00 3.51
227 228 2.701780 CGACGTAGCAGGCCTCAGT 61.702 63.158 0.00 0.00 0.00 3.41
228 229 2.103143 CGACGTAGCAGGCCTCAG 59.897 66.667 0.00 0.00 0.00 3.35
229 230 3.449227 CCGACGTAGCAGGCCTCA 61.449 66.667 0.00 0.00 0.00 3.86
230 231 4.208686 CCCGACGTAGCAGGCCTC 62.209 72.222 0.00 0.00 0.00 4.70
234 235 3.528370 CTCCCCCGACGTAGCAGG 61.528 72.222 0.00 0.00 0.00 4.85
235 236 3.528370 CCTCCCCCGACGTAGCAG 61.528 72.222 0.00 0.00 0.00 4.24
244 245 3.629035 TAGTTGACCCCCTCCCCCG 62.629 68.421 0.00 0.00 0.00 5.73
245 246 1.999568 GTAGTTGACCCCCTCCCCC 61.000 68.421 0.00 0.00 0.00 5.40
246 247 0.843343 TTGTAGTTGACCCCCTCCCC 60.843 60.000 0.00 0.00 0.00 4.81
247 248 0.327259 GTTGTAGTTGACCCCCTCCC 59.673 60.000 0.00 0.00 0.00 4.30
248 249 1.061546 TGTTGTAGTTGACCCCCTCC 58.938 55.000 0.00 0.00 0.00 4.30
249 250 2.158726 TGTTGTTGTAGTTGACCCCCTC 60.159 50.000 0.00 0.00 0.00 4.30
250 251 1.847737 TGTTGTTGTAGTTGACCCCCT 59.152 47.619 0.00 0.00 0.00 4.79
251 252 1.951602 GTGTTGTTGTAGTTGACCCCC 59.048 52.381 0.00 0.00 0.00 5.40
252 253 1.951602 GGTGTTGTTGTAGTTGACCCC 59.048 52.381 0.00 0.00 0.00 4.95
253 254 1.951602 GGGTGTTGTTGTAGTTGACCC 59.048 52.381 0.00 0.00 35.08 4.46
254 255 1.951602 GGGGTGTTGTTGTAGTTGACC 59.048 52.381 0.00 0.00 0.00 4.02
255 256 2.876550 GAGGGGTGTTGTTGTAGTTGAC 59.123 50.000 0.00 0.00 0.00 3.18
256 257 2.158726 GGAGGGGTGTTGTTGTAGTTGA 60.159 50.000 0.00 0.00 0.00 3.18
257 258 2.158667 AGGAGGGGTGTTGTTGTAGTTG 60.159 50.000 0.00 0.00 0.00 3.16
258 259 2.105993 GAGGAGGGGTGTTGTTGTAGTT 59.894 50.000 0.00 0.00 0.00 2.24
259 260 1.697982 GAGGAGGGGTGTTGTTGTAGT 59.302 52.381 0.00 0.00 0.00 2.73
260 261 1.978580 AGAGGAGGGGTGTTGTTGTAG 59.021 52.381 0.00 0.00 0.00 2.74
261 262 1.697432 CAGAGGAGGGGTGTTGTTGTA 59.303 52.381 0.00 0.00 0.00 2.41
262 263 0.474184 CAGAGGAGGGGTGTTGTTGT 59.526 55.000 0.00 0.00 0.00 3.32
263 264 0.764890 TCAGAGGAGGGGTGTTGTTG 59.235 55.000 0.00 0.00 0.00 3.33
264 265 1.352352 CATCAGAGGAGGGGTGTTGTT 59.648 52.381 0.00 0.00 0.00 2.83
265 266 0.987294 CATCAGAGGAGGGGTGTTGT 59.013 55.000 0.00 0.00 0.00 3.32
266 267 0.393537 GCATCAGAGGAGGGGTGTTG 60.394 60.000 0.00 0.00 0.00 3.33
267 268 1.566298 GGCATCAGAGGAGGGGTGTT 61.566 60.000 0.00 0.00 0.00 3.32
268 269 1.997874 GGCATCAGAGGAGGGGTGT 60.998 63.158 0.00 0.00 0.00 4.16
269 270 2.750657 GGGCATCAGAGGAGGGGTG 61.751 68.421 0.00 0.00 0.00 4.61
270 271 2.367512 GGGCATCAGAGGAGGGGT 60.368 66.667 0.00 0.00 0.00 4.95
271 272 2.367377 TGGGCATCAGAGGAGGGG 60.367 66.667 0.00 0.00 0.00 4.79
272 273 1.692042 AGTGGGCATCAGAGGAGGG 60.692 63.158 0.00 0.00 0.00 4.30
273 274 1.270414 ACAGTGGGCATCAGAGGAGG 61.270 60.000 0.00 0.00 0.00 4.30
274 275 1.411977 CTACAGTGGGCATCAGAGGAG 59.588 57.143 0.00 0.00 0.00 3.69
275 276 1.273267 ACTACAGTGGGCATCAGAGGA 60.273 52.381 0.00 0.00 0.00 3.71
276 277 1.137872 GACTACAGTGGGCATCAGAGG 59.862 57.143 0.00 0.00 0.00 3.69
277 278 1.137872 GGACTACAGTGGGCATCAGAG 59.862 57.143 0.00 0.00 0.00 3.35
278 279 1.195115 GGACTACAGTGGGCATCAGA 58.805 55.000 0.00 0.00 0.00 3.27
279 280 0.904649 TGGACTACAGTGGGCATCAG 59.095 55.000 0.00 0.00 0.00 2.90
280 281 0.904649 CTGGACTACAGTGGGCATCA 59.095 55.000 0.00 0.00 42.42 3.07
281 282 0.179000 CCTGGACTACAGTGGGCATC 59.821 60.000 0.00 0.00 46.06 3.91
282 283 1.915078 GCCTGGACTACAGTGGGCAT 61.915 60.000 0.00 0.00 46.06 4.40
283 284 2.592993 GCCTGGACTACAGTGGGCA 61.593 63.158 0.00 0.00 46.06 5.36
284 285 2.269241 GCCTGGACTACAGTGGGC 59.731 66.667 0.00 0.00 46.06 5.36
285 286 1.274703 ATGGCCTGGACTACAGTGGG 61.275 60.000 3.32 0.00 46.06 4.61
286 287 0.179000 GATGGCCTGGACTACAGTGG 59.821 60.000 3.32 0.00 46.06 4.00
287 288 0.904649 TGATGGCCTGGACTACAGTG 59.095 55.000 3.32 0.00 46.06 3.66
288 289 0.905357 GTGATGGCCTGGACTACAGT 59.095 55.000 3.32 0.00 46.06 3.55
290 291 1.613317 CGGTGATGGCCTGGACTACA 61.613 60.000 3.32 0.00 0.00 2.74
291 292 1.144057 CGGTGATGGCCTGGACTAC 59.856 63.158 3.32 0.00 0.00 2.73
292 293 2.063979 CCGGTGATGGCCTGGACTA 61.064 63.158 3.32 0.00 0.00 2.59
293 294 3.402681 CCGGTGATGGCCTGGACT 61.403 66.667 3.32 0.00 0.00 3.85
301 302 1.376683 TTCTTTCCGCCGGTGATGG 60.377 57.895 18.79 7.23 0.00 3.51
302 303 1.644786 GGTTCTTTCCGCCGGTGATG 61.645 60.000 18.79 0.00 0.00 3.07
303 304 1.376812 GGTTCTTTCCGCCGGTGAT 60.377 57.895 18.79 0.00 0.00 3.06
304 305 2.031465 GGTTCTTTCCGCCGGTGA 59.969 61.111 18.79 3.77 0.00 4.02
305 306 3.053896 GGGTTCTTTCCGCCGGTG 61.054 66.667 8.42 8.42 0.00 4.94
306 307 3.546714 CTGGGTTCTTTCCGCCGGT 62.547 63.158 1.63 0.00 0.00 5.28
307 308 2.741486 TTCTGGGTTCTTTCCGCCGG 62.741 60.000 0.00 0.00 0.00 6.13
308 309 1.298859 CTTCTGGGTTCTTTCCGCCG 61.299 60.000 0.00 0.00 0.00 6.46
309 310 0.036306 TCTTCTGGGTTCTTTCCGCC 59.964 55.000 0.00 0.00 0.00 6.13
310 311 1.535896 GTTCTTCTGGGTTCTTTCCGC 59.464 52.381 0.00 0.00 0.00 5.54
311 312 2.152016 GGTTCTTCTGGGTTCTTTCCG 58.848 52.381 0.00 0.00 0.00 4.30
312 313 2.158519 TGGGTTCTTCTGGGTTCTTTCC 60.159 50.000 0.00 0.00 0.00 3.13
313 314 3.149981 CTGGGTTCTTCTGGGTTCTTTC 58.850 50.000 0.00 0.00 0.00 2.62
314 315 2.753168 GCTGGGTTCTTCTGGGTTCTTT 60.753 50.000 0.00 0.00 0.00 2.52
315 316 1.202940 GCTGGGTTCTTCTGGGTTCTT 60.203 52.381 0.00 0.00 0.00 2.52
316 317 0.402121 GCTGGGTTCTTCTGGGTTCT 59.598 55.000 0.00 0.00 0.00 3.01
317 318 0.110486 TGCTGGGTTCTTCTGGGTTC 59.890 55.000 0.00 0.00 0.00 3.62
318 319 0.779997 ATGCTGGGTTCTTCTGGGTT 59.220 50.000 0.00 0.00 0.00 4.11
319 320 0.038744 CATGCTGGGTTCTTCTGGGT 59.961 55.000 0.00 0.00 0.00 4.51
320 321 0.682209 CCATGCTGGGTTCTTCTGGG 60.682 60.000 0.00 0.00 32.67 4.45
321 322 0.329261 TCCATGCTGGGTTCTTCTGG 59.671 55.000 2.86 0.00 38.32 3.86
322 323 1.004044 ACTCCATGCTGGGTTCTTCTG 59.996 52.381 2.86 0.00 38.32 3.02
323 324 1.366319 ACTCCATGCTGGGTTCTTCT 58.634 50.000 2.86 0.00 38.32 2.85
324 325 3.118261 TCATACTCCATGCTGGGTTCTTC 60.118 47.826 2.86 0.00 38.32 2.87
325 326 2.846206 TCATACTCCATGCTGGGTTCTT 59.154 45.455 2.86 0.00 38.32 2.52
326 327 2.437281 CTCATACTCCATGCTGGGTTCT 59.563 50.000 2.86 0.00 38.32 3.01
327 328 2.486191 CCTCATACTCCATGCTGGGTTC 60.486 54.545 2.86 0.00 38.32 3.62
328 329 1.492176 CCTCATACTCCATGCTGGGTT 59.508 52.381 2.86 0.00 38.32 4.11
329 330 1.135094 CCTCATACTCCATGCTGGGT 58.865 55.000 2.86 3.13 38.32 4.51
330 331 0.399454 CCCTCATACTCCATGCTGGG 59.601 60.000 2.86 0.00 39.83 4.45
331 332 1.347050 CTCCCTCATACTCCATGCTGG 59.653 57.143 0.00 0.00 39.43 4.85
332 333 2.036992 GACTCCCTCATACTCCATGCTG 59.963 54.545 0.00 0.00 34.35 4.41
333 334 2.324541 GACTCCCTCATACTCCATGCT 58.675 52.381 0.00 0.00 34.35 3.79
334 335 1.346068 GGACTCCCTCATACTCCATGC 59.654 57.143 0.00 0.00 34.35 4.06
335 336 1.974236 GGGACTCCCTCATACTCCATG 59.026 57.143 6.90 0.00 41.34 3.66
336 337 1.481428 CGGGACTCCCTCATACTCCAT 60.481 57.143 12.62 0.00 42.67 3.41
337 338 0.106167 CGGGACTCCCTCATACTCCA 60.106 60.000 12.62 0.00 42.67 3.86
338 339 0.828343 CCGGGACTCCCTCATACTCC 60.828 65.000 12.62 0.00 42.67 3.85
339 340 0.185416 TCCGGGACTCCCTCATACTC 59.815 60.000 12.62 0.00 42.67 2.59
340 341 0.106116 GTCCGGGACTCCCTCATACT 60.106 60.000 19.92 0.00 42.67 2.12
341 342 0.106116 AGTCCGGGACTCCCTCATAC 60.106 60.000 23.90 4.98 38.71 2.39
342 343 1.424302 CTAGTCCGGGACTCCCTCATA 59.576 57.143 31.91 12.75 42.40 2.15
343 344 0.186386 CTAGTCCGGGACTCCCTCAT 59.814 60.000 31.91 10.38 42.40 2.90
344 345 1.613610 CTAGTCCGGGACTCCCTCA 59.386 63.158 31.91 14.20 42.40 3.86
345 346 1.152715 CCTAGTCCGGGACTCCCTC 60.153 68.421 31.91 2.12 42.40 4.30
346 347 3.017139 CCTAGTCCGGGACTCCCT 58.983 66.667 31.91 12.26 42.40 4.20
353 354 2.762875 GACACCCCCTAGTCCGGG 60.763 72.222 0.00 5.45 45.70 5.73
354 355 2.762875 GGACACCCCCTAGTCCGG 60.763 72.222 0.00 0.00 44.23 5.14
357 358 0.186873 TATCCGGACACCCCCTAGTC 59.813 60.000 6.12 0.00 0.00 2.59
358 359 0.187851 CTATCCGGACACCCCCTAGT 59.812 60.000 6.12 0.00 0.00 2.57
359 360 0.187851 ACTATCCGGACACCCCCTAG 59.812 60.000 6.12 5.24 0.00 3.02
360 361 0.186873 GACTATCCGGACACCCCCTA 59.813 60.000 6.12 0.00 0.00 3.53
361 362 1.075450 GACTATCCGGACACCCCCT 60.075 63.158 6.12 0.00 0.00 4.79
362 363 2.496291 CGACTATCCGGACACCCCC 61.496 68.421 6.12 0.00 0.00 5.40
363 364 1.039233 TTCGACTATCCGGACACCCC 61.039 60.000 6.12 0.00 0.00 4.95
364 365 0.101939 GTTCGACTATCCGGACACCC 59.898 60.000 6.12 0.00 37.93 4.61
365 366 1.101331 AGTTCGACTATCCGGACACC 58.899 55.000 6.12 0.00 40.37 4.16
366 367 2.032675 GGTAGTTCGACTATCCGGACAC 59.967 54.545 6.12 0.00 40.37 3.67
367 368 2.292267 GGTAGTTCGACTATCCGGACA 58.708 52.381 6.12 0.00 40.37 4.02
368 369 2.292267 TGGTAGTTCGACTATCCGGAC 58.708 52.381 6.12 0.00 38.28 4.79
369 370 2.715749 TGGTAGTTCGACTATCCGGA 57.284 50.000 6.61 6.61 30.81 5.14
370 371 2.882761 TGATGGTAGTTCGACTATCCGG 59.117 50.000 0.00 0.00 36.70 5.14
371 372 4.669453 CGATGATGGTAGTTCGACTATCCG 60.669 50.000 6.86 0.00 36.70 4.18
372 373 4.379603 CCGATGATGGTAGTTCGACTATCC 60.380 50.000 6.86 0.00 36.70 2.59
373 374 4.724303 CCGATGATGGTAGTTCGACTATC 58.276 47.826 0.00 3.40 37.71 2.08
374 375 3.057456 GCCGATGATGGTAGTTCGACTAT 60.057 47.826 0.00 0.00 32.65 2.12
375 376 2.292569 GCCGATGATGGTAGTTCGACTA 59.707 50.000 0.00 0.00 33.59 2.59
376 377 1.067212 GCCGATGATGGTAGTTCGACT 59.933 52.381 0.00 0.00 33.59 4.18
377 378 1.488527 GCCGATGATGGTAGTTCGAC 58.511 55.000 0.00 0.00 33.59 4.20
378 379 0.387929 GGCCGATGATGGTAGTTCGA 59.612 55.000 0.00 0.00 33.59 3.71
379 380 0.939577 CGGCCGATGATGGTAGTTCG 60.940 60.000 24.07 0.00 0.00 3.95
380 381 0.600255 CCGGCCGATGATGGTAGTTC 60.600 60.000 30.73 0.00 0.00 3.01
381 382 1.046472 TCCGGCCGATGATGGTAGTT 61.046 55.000 30.73 0.00 0.00 2.24
382 383 1.456892 TCCGGCCGATGATGGTAGT 60.457 57.895 30.73 0.00 0.00 2.73
383 384 1.006102 GTCCGGCCGATGATGGTAG 60.006 63.158 30.73 6.27 0.00 3.18
384 385 1.456892 AGTCCGGCCGATGATGGTA 60.457 57.895 30.73 0.00 0.00 3.25
385 386 2.764128 AGTCCGGCCGATGATGGT 60.764 61.111 30.73 2.31 0.00 3.55
386 387 2.029666 GAGTCCGGCCGATGATGG 59.970 66.667 30.73 8.93 0.00 3.51
387 388 2.029666 GGAGTCCGGCCGATGATG 59.970 66.667 30.73 9.82 0.00 3.07
388 389 2.032860 CTTGGAGTCCGGCCGATGAT 62.033 60.000 30.73 9.58 0.00 2.45
389 390 2.682136 TTGGAGTCCGGCCGATGA 60.682 61.111 30.73 14.33 0.00 2.92
390 391 2.202932 CTTGGAGTCCGGCCGATG 60.203 66.667 30.73 11.63 0.00 3.84
391 392 2.363795 TCTTGGAGTCCGGCCGAT 60.364 61.111 30.73 12.65 0.00 4.18
392 393 2.488771 TAGTCTTGGAGTCCGGCCGA 62.489 60.000 30.73 10.38 0.00 5.54
393 394 1.392710 ATAGTCTTGGAGTCCGGCCG 61.393 60.000 21.04 21.04 0.00 6.13
394 395 0.105039 CATAGTCTTGGAGTCCGGCC 59.895 60.000 4.30 0.00 0.00 6.13
395 396 1.112113 TCATAGTCTTGGAGTCCGGC 58.888 55.000 4.30 0.00 0.00 6.13
396 397 3.024547 TCTTCATAGTCTTGGAGTCCGG 58.975 50.000 4.30 0.00 0.00 5.14
397 398 4.927978 ATCTTCATAGTCTTGGAGTCCG 57.072 45.455 4.30 0.00 0.00 4.79
398 399 6.716934 TGTATCTTCATAGTCTTGGAGTCC 57.283 41.667 0.73 0.73 0.00 3.85
399 400 8.001881 TCTTGTATCTTCATAGTCTTGGAGTC 57.998 38.462 0.00 0.00 0.00 3.36
400 401 7.962995 TCTTGTATCTTCATAGTCTTGGAGT 57.037 36.000 0.00 0.00 0.00 3.85
401 402 9.258826 CAATCTTGTATCTTCATAGTCTTGGAG 57.741 37.037 0.00 0.00 0.00 3.86
402 403 8.981659 TCAATCTTGTATCTTCATAGTCTTGGA 58.018 33.333 0.00 0.00 0.00 3.53
403 404 9.605275 TTCAATCTTGTATCTTCATAGTCTTGG 57.395 33.333 0.00 0.00 0.00 3.61
410 411 9.521503 CGAAGTCTTCAATCTTGTATCTTCATA 57.478 33.333 12.99 0.00 32.10 2.15
411 412 8.037758 ACGAAGTCTTCAATCTTGTATCTTCAT 58.962 33.333 12.99 0.00 29.74 2.57
412 413 7.378966 ACGAAGTCTTCAATCTTGTATCTTCA 58.621 34.615 12.99 0.00 29.74 3.02
413 414 7.820044 ACGAAGTCTTCAATCTTGTATCTTC 57.180 36.000 12.99 0.00 29.74 2.87
444 445 0.618458 CAAGGAAAGTCCCATCCGGA 59.382 55.000 6.61 6.61 40.78 5.14
445 446 0.394352 CCAAGGAAAGTCCCATCCGG 60.394 60.000 0.00 0.00 40.78 5.14
446 447 1.032114 GCCAAGGAAAGTCCCATCCG 61.032 60.000 0.00 0.00 40.78 4.18
447 448 1.032114 CGCCAAGGAAAGTCCCATCC 61.032 60.000 0.00 0.00 37.19 3.51
448 449 0.322546 ACGCCAAGGAAAGTCCCATC 60.323 55.000 0.00 0.00 37.19 3.51
449 450 0.609131 CACGCCAAGGAAAGTCCCAT 60.609 55.000 0.00 0.00 37.19 4.00
450 451 1.228124 CACGCCAAGGAAAGTCCCA 60.228 57.895 0.00 0.00 37.19 4.37
451 452 1.971695 CCACGCCAAGGAAAGTCCC 60.972 63.158 0.00 0.00 37.19 4.46
452 453 0.536460 TTCCACGCCAAGGAAAGTCC 60.536 55.000 0.00 0.00 41.94 3.85
453 454 0.875059 CTTCCACGCCAAGGAAAGTC 59.125 55.000 0.00 0.00 44.07 3.01
454 455 0.537371 CCTTCCACGCCAAGGAAAGT 60.537 55.000 2.12 0.00 44.07 2.66
455 456 1.866853 GCCTTCCACGCCAAGGAAAG 61.867 60.000 10.97 2.24 44.07 2.62
456 457 1.901464 GCCTTCCACGCCAAGGAAA 60.901 57.895 10.97 0.00 44.07 3.13
457 458 2.282180 GCCTTCCACGCCAAGGAA 60.282 61.111 10.97 5.63 42.94 3.36
458 459 3.126703 TTGCCTTCCACGCCAAGGA 62.127 57.895 10.97 0.00 42.94 3.36
459 460 2.597217 TTGCCTTCCACGCCAAGG 60.597 61.111 3.73 3.73 43.13 3.61
460 461 2.956987 CTTGCCTTCCACGCCAAG 59.043 61.111 0.00 0.00 0.00 3.61
461 462 3.294493 GCTTGCCTTCCACGCCAA 61.294 61.111 0.00 0.00 32.93 4.52
462 463 3.790416 AAGCTTGCCTTCCACGCCA 62.790 57.895 0.00 0.00 39.36 5.69
463 464 2.985847 AAGCTTGCCTTCCACGCC 60.986 61.111 0.00 0.00 39.36 5.68
464 465 2.256461 CAAGCTTGCCTTCCACGC 59.744 61.111 14.65 0.00 38.87 5.34
465 466 2.956987 CCAAGCTTGCCTTCCACG 59.043 61.111 21.43 0.62 0.00 4.94
466 467 2.653115 GCCAAGCTTGCCTTCCAC 59.347 61.111 21.43 0.12 0.00 4.02
467 468 2.769652 ATCGCCAAGCTTGCCTTCCA 62.770 55.000 21.43 1.33 0.00 3.53
468 469 0.748005 TATCGCCAAGCTTGCCTTCC 60.748 55.000 21.43 5.26 0.00 3.46
469 470 0.378610 GTATCGCCAAGCTTGCCTTC 59.621 55.000 21.43 8.32 0.00 3.46
470 471 1.369091 CGTATCGCCAAGCTTGCCTT 61.369 55.000 21.43 7.68 0.00 4.35
471 472 1.815421 CGTATCGCCAAGCTTGCCT 60.815 57.895 21.43 7.17 0.00 4.75
472 473 2.709475 CGTATCGCCAAGCTTGCC 59.291 61.111 21.43 9.45 0.00 4.52
473 474 1.160329 ATCCGTATCGCCAAGCTTGC 61.160 55.000 21.43 14.85 0.00 4.01
474 475 2.148916 TATCCGTATCGCCAAGCTTG 57.851 50.000 19.93 19.93 0.00 4.01
475 476 2.037251 ACATATCCGTATCGCCAAGCTT 59.963 45.455 0.00 0.00 0.00 3.74
476 477 1.618837 ACATATCCGTATCGCCAAGCT 59.381 47.619 0.00 0.00 0.00 3.74
477 478 2.080286 ACATATCCGTATCGCCAAGC 57.920 50.000 0.00 0.00 0.00 4.01
478 479 4.696899 TCTACATATCCGTATCGCCAAG 57.303 45.455 0.00 0.00 0.00 3.61
479 480 4.948004 AGATCTACATATCCGTATCGCCAA 59.052 41.667 0.00 0.00 0.00 4.52
480 481 4.524053 AGATCTACATATCCGTATCGCCA 58.476 43.478 0.00 0.00 0.00 5.69
481 482 4.023878 GGAGATCTACATATCCGTATCGCC 60.024 50.000 0.00 0.00 30.60 5.54
482 483 4.817464 AGGAGATCTACATATCCGTATCGC 59.183 45.833 7.93 0.00 44.22 4.58
483 484 7.410800 GTAGGAGATCTACATATCCGTATCG 57.589 44.000 7.93 0.00 44.22 2.92
495 496 5.533903 TCGGTTACAATGGTAGGAGATCTAC 59.466 44.000 0.00 0.00 45.78 2.59
496 497 5.533903 GTCGGTTACAATGGTAGGAGATCTA 59.466 44.000 0.00 0.00 0.00 1.98
497 498 4.341520 GTCGGTTACAATGGTAGGAGATCT 59.658 45.833 0.00 0.00 0.00 2.75
498 499 4.341520 AGTCGGTTACAATGGTAGGAGATC 59.658 45.833 0.00 0.00 0.00 2.75
499 500 4.287552 AGTCGGTTACAATGGTAGGAGAT 58.712 43.478 0.00 0.00 0.00 2.75
500 501 3.698040 GAGTCGGTTACAATGGTAGGAGA 59.302 47.826 0.00 0.00 0.00 3.71
501 502 3.700038 AGAGTCGGTTACAATGGTAGGAG 59.300 47.826 0.00 0.00 0.00 3.69
502 503 3.446161 CAGAGTCGGTTACAATGGTAGGA 59.554 47.826 0.00 0.00 0.00 2.94
503 504 3.194968 ACAGAGTCGGTTACAATGGTAGG 59.805 47.826 0.00 0.00 0.00 3.18
504 505 4.174009 CACAGAGTCGGTTACAATGGTAG 58.826 47.826 0.00 0.00 0.00 3.18
505 506 3.575256 ACACAGAGTCGGTTACAATGGTA 59.425 43.478 0.00 0.00 0.00 3.25
506 507 2.367567 ACACAGAGTCGGTTACAATGGT 59.632 45.455 0.00 0.00 0.00 3.55
507 508 3.040147 ACACAGAGTCGGTTACAATGG 57.960 47.619 0.00 0.00 0.00 3.16
508 509 4.387862 GGTTACACAGAGTCGGTTACAATG 59.612 45.833 0.00 0.00 0.00 2.82
509 510 4.562143 GGGTTACACAGAGTCGGTTACAAT 60.562 45.833 0.00 0.00 0.00 2.71
510 511 3.243839 GGGTTACACAGAGTCGGTTACAA 60.244 47.826 0.00 0.00 0.00 2.41
511 512 2.297033 GGGTTACACAGAGTCGGTTACA 59.703 50.000 0.00 0.00 0.00 2.41
512 513 2.560105 AGGGTTACACAGAGTCGGTTAC 59.440 50.000 0.00 0.00 0.00 2.50
513 514 2.880443 AGGGTTACACAGAGTCGGTTA 58.120 47.619 0.00 0.00 0.00 2.85
514 515 1.713297 AGGGTTACACAGAGTCGGTT 58.287 50.000 0.00 0.00 0.00 4.44
515 516 2.444421 CTAGGGTTACACAGAGTCGGT 58.556 52.381 0.00 0.00 0.00 4.69
516 517 1.134560 GCTAGGGTTACACAGAGTCGG 59.865 57.143 0.00 0.00 0.00 4.79
517 518 1.134560 GGCTAGGGTTACACAGAGTCG 59.865 57.143 0.00 0.00 0.00 4.18
518 519 1.481363 GGGCTAGGGTTACACAGAGTC 59.519 57.143 0.00 0.00 0.00 3.36
519 520 1.078989 AGGGCTAGGGTTACACAGAGT 59.921 52.381 0.00 0.00 0.00 3.24
520 521 1.757699 GAGGGCTAGGGTTACACAGAG 59.242 57.143 0.00 0.00 0.00 3.35
521 522 1.361543 AGAGGGCTAGGGTTACACAGA 59.638 52.381 0.00 0.00 0.00 3.41
522 523 1.757699 GAGAGGGCTAGGGTTACACAG 59.242 57.143 0.00 0.00 0.00 3.66
523 524 1.621622 GGAGAGGGCTAGGGTTACACA 60.622 57.143 0.00 0.00 0.00 3.72
524 525 1.121378 GGAGAGGGCTAGGGTTACAC 58.879 60.000 0.00 0.00 0.00 2.90
525 526 0.396695 CGGAGAGGGCTAGGGTTACA 60.397 60.000 0.00 0.00 0.00 2.41
526 527 1.114119 CCGGAGAGGGCTAGGGTTAC 61.114 65.000 0.00 0.00 35.97 2.50
527 528 1.232216 CCGGAGAGGGCTAGGGTTA 59.768 63.158 0.00 0.00 35.97 2.85
528 529 2.041819 CCGGAGAGGGCTAGGGTT 60.042 66.667 0.00 0.00 35.97 4.11
529 530 3.357082 ACCGGAGAGGGCTAGGGT 61.357 66.667 9.46 0.00 46.96 4.34
530 531 2.840102 CACCGGAGAGGGCTAGGG 60.840 72.222 9.46 0.00 46.96 3.53
531 532 2.042843 ACACCGGAGAGGGCTAGG 60.043 66.667 9.46 0.00 46.96 3.02
532 533 0.183014 TAGACACCGGAGAGGGCTAG 59.817 60.000 9.46 0.00 46.96 3.42
533 534 0.851469 ATAGACACCGGAGAGGGCTA 59.149 55.000 9.46 6.85 46.96 3.93
534 535 0.851469 TATAGACACCGGAGAGGGCT 59.149 55.000 9.46 4.41 46.96 5.19
535 536 1.926108 ATATAGACACCGGAGAGGGC 58.074 55.000 9.46 0.00 46.96 5.19
536 537 4.220163 GGTTTATATAGACACCGGAGAGGG 59.780 50.000 9.46 0.00 46.96 4.30
537 538 4.082895 CGGTTTATATAGACACCGGAGAGG 60.083 50.000 15.65 0.00 46.92 3.69
538 539 5.044428 CGGTTTATATAGACACCGGAGAG 57.956 47.826 15.65 0.00 46.92 3.20
544 545 2.289882 GCCCCCGGTTTATATAGACACC 60.290 54.545 0.00 2.59 0.00 4.16
545 546 2.289882 GGCCCCCGGTTTATATAGACAC 60.290 54.545 0.00 0.00 0.00 3.67
546 547 1.980036 GGCCCCCGGTTTATATAGACA 59.020 52.381 0.00 0.00 0.00 3.41
547 548 1.980036 TGGCCCCCGGTTTATATAGAC 59.020 52.381 0.00 0.00 0.00 2.59
548 549 2.419457 TGGCCCCCGGTTTATATAGA 57.581 50.000 0.00 0.00 0.00 1.98
549 550 3.732048 ATTGGCCCCCGGTTTATATAG 57.268 47.619 0.00 0.00 0.00 1.31
550 551 3.054213 GCTATTGGCCCCCGGTTTATATA 60.054 47.826 0.00 0.00 34.27 0.86
551 552 2.291346 GCTATTGGCCCCCGGTTTATAT 60.291 50.000 0.00 0.00 34.27 0.86
552 553 1.074244 GCTATTGGCCCCCGGTTTATA 59.926 52.381 0.00 0.00 34.27 0.98
553 554 0.178973 GCTATTGGCCCCCGGTTTAT 60.179 55.000 0.00 0.00 34.27 1.40
554 555 1.227946 GCTATTGGCCCCCGGTTTA 59.772 57.895 0.00 0.00 34.27 2.01
555 556 2.043349 GCTATTGGCCCCCGGTTT 60.043 61.111 0.00 0.00 34.27 3.27
556 557 3.021263 AGCTATTGGCCCCCGGTT 61.021 61.111 0.00 0.00 43.05 4.44
557 558 3.489513 GAGCTATTGGCCCCCGGT 61.490 66.667 0.00 0.00 43.05 5.28
558 559 4.271016 GGAGCTATTGGCCCCCGG 62.271 72.222 0.00 0.00 43.05 5.73
559 560 3.171388 AGGAGCTATTGGCCCCCG 61.171 66.667 0.00 0.00 39.92 5.73
560 561 2.386935 ACAGGAGCTATTGGCCCCC 61.387 63.158 0.00 0.00 39.92 5.40
838 853 1.214305 AGGGGCAGGGTAAGCAATGA 61.214 55.000 0.00 0.00 0.00 2.57
1132 1147 6.267699 GGGAAAAGGAAAGAAATCAGGAGAAA 59.732 38.462 0.00 0.00 0.00 2.52
1587 1603 8.090788 TCTAACAAATGATCCCTAGCTAACTT 57.909 34.615 0.00 0.00 0.00 2.66
1595 1611 8.548025 TCAAGTTCATCTAACAAATGATCCCTA 58.452 33.333 0.00 0.00 40.83 3.53
1680 1696 8.621532 ACAAAGAAAATAGAGCATGAACACTA 57.378 30.769 0.00 0.00 0.00 2.74
1759 1778 2.237643 TCTATTCGGCAGCCCAGTTTTA 59.762 45.455 5.63 0.00 0.00 1.52
1930 1950 8.770438 TCACAAAATTTAGTGCAAGAAAAAGT 57.230 26.923 0.00 0.00 35.76 2.66
2012 2032 5.534278 TGCAACTCATTTAGTTCATGGAACA 59.466 36.000 11.28 0.00 45.64 3.18
2136 2178 0.726827 CTCACCACACACACACACAC 59.273 55.000 0.00 0.00 0.00 3.82
2137 2179 0.610687 TCTCACCACACACACACACA 59.389 50.000 0.00 0.00 0.00 3.72
2138 2180 1.953559 ATCTCACCACACACACACAC 58.046 50.000 0.00 0.00 0.00 3.82
2139 2181 2.093235 TCAATCTCACCACACACACACA 60.093 45.455 0.00 0.00 0.00 3.72
2212 2258 7.116233 GGGTTGTTCTTGCTTATTATTTGTGTG 59.884 37.037 0.00 0.00 0.00 3.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.