Multiple sequence alignment - TraesCS7B01G449000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G449000 chr7B 100.000 3673 0 0 1 3673 711474553 711478225 0.000000e+00 6783.0
1 TraesCS7B01G449000 chr7B 87.968 1737 152 32 874 2580 711489630 711487921 0.000000e+00 1997.0
2 TraesCS7B01G449000 chr7B 88.679 689 60 9 1 676 711490972 711490289 0.000000e+00 824.0
3 TraesCS7B01G449000 chr7B 91.544 272 21 2 2591 2861 727918533 727918263 1.250000e-99 374.0
4 TraesCS7B01G449000 chr7B 85.714 189 22 5 700 885 711489846 711489660 1.040000e-45 195.0
5 TraesCS7B01G449000 chr7B 79.310 203 34 8 3473 3671 684293713 684293911 6.400000e-28 135.0
6 TraesCS7B01G449000 chr7D 90.063 1741 116 30 874 2580 617378305 617376588 0.000000e+00 2204.0
7 TraesCS7B01G449000 chr7D 89.002 1664 126 24 800 2423 617197069 617198715 0.000000e+00 2006.0
8 TraesCS7B01G449000 chr7D 89.521 334 33 2 340 673 617379406 617379075 4.390000e-114 422.0
9 TraesCS7B01G449000 chr7D 88.199 322 29 4 3 316 617195941 617196261 3.460000e-100 375.0
10 TraesCS7B01G449000 chr7D 86.842 342 23 8 1 342 617384109 617383790 2.700000e-96 363.0
11 TraesCS7B01G449000 chr7D 87.313 134 11 3 731 860 617378811 617378680 8.220000e-32 148.0
12 TraesCS7B01G449000 chr7D 93.137 102 6 1 700 801 617378942 617378842 8.220000e-32 148.0
13 TraesCS7B01G449000 chr7A 90.318 1570 135 8 1014 2580 711172538 711170983 0.000000e+00 2041.0
14 TraesCS7B01G449000 chr7A 91.406 1408 116 5 1017 2423 710959280 710957877 0.000000e+00 1925.0
15 TraesCS7B01G449000 chr7A 88.356 730 71 5 2958 3673 6858160 6857431 0.000000e+00 865.0
16 TraesCS7B01G449000 chr7A 87.390 682 66 10 3 681 711173678 711173014 0.000000e+00 765.0
17 TraesCS7B01G449000 chr7A 85.714 175 14 8 701 868 711172925 711172755 1.360000e-39 174.0
18 TraesCS7B01G449000 chr7A 81.443 97 8 4 821 907 710959672 710959576 1.830000e-08 71.3
19 TraesCS7B01G449000 chrUn 88.235 1292 135 10 1141 2422 241849809 241848525 0.000000e+00 1528.0
20 TraesCS7B01G449000 chr4A 88.136 1298 137 11 1135 2422 599612138 599613428 0.000000e+00 1528.0
21 TraesCS7B01G449000 chr4A 83.715 1265 189 14 1161 2421 24557414 24556163 0.000000e+00 1179.0
22 TraesCS7B01G449000 chr4D 83.703 1264 185 18 1161 2418 443206699 443207947 0.000000e+00 1173.0
23 TraesCS7B01G449000 chr1B 89.106 716 61 9 1 703 667982684 667981973 0.000000e+00 874.0
24 TraesCS7B01G449000 chr1B 90.975 277 23 2 2587 2862 398959226 398959501 4.480000e-99 372.0
25 TraesCS7B01G449000 chr5B 92.216 501 29 3 3006 3505 54318565 54318074 0.000000e+00 701.0
26 TraesCS7B01G449000 chr5B 91.241 274 21 3 2591 2862 639761628 639761356 1.610000e-98 370.0
27 TraesCS7B01G449000 chr5B 92.727 165 12 0 3509 3673 54316791 54316627 4.740000e-59 239.0
28 TraesCS7B01G449000 chr3D 91.697 277 19 3 2590 2863 537936006 537935731 7.440000e-102 381.0
29 TraesCS7B01G449000 chr1A 91.912 272 20 2 2590 2859 534636479 534636208 2.680000e-101 379.0
30 TraesCS7B01G449000 chr4B 91.852 270 21 1 2595 2863 468659629 468659360 3.460000e-100 375.0
31 TraesCS7B01G449000 chr2D 91.304 276 21 3 2587 2859 601127309 601127584 1.250000e-99 374.0
32 TraesCS7B01G449000 chr5D 88.050 318 31 6 2588 2898 372335423 372335106 1.610000e-98 370.0
33 TraesCS7B01G449000 chr2B 90.714 280 23 3 2587 2863 733607397 733607118 1.610000e-98 370.0
34 TraesCS7B01G449000 chr2B 86.275 153 15 3 3525 3673 482704958 482704808 1.060000e-35 161.0
35 TraesCS7B01G449000 chr1D 81.935 155 26 2 3521 3673 427156643 427156489 2.980000e-26 130.0
36 TraesCS7B01G449000 chr2A 79.808 104 18 2 3569 3671 9979467 9979366 5.090000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G449000 chr7B 711474553 711478225 3672 False 6783.000000 6783 100.000000 1 3673 1 chr7B.!!$F2 3672
1 TraesCS7B01G449000 chr7B 711487921 711490972 3051 True 1005.333333 1997 87.453667 1 2580 3 chr7B.!!$R2 2579
2 TraesCS7B01G449000 chr7D 617195941 617198715 2774 False 1190.500000 2006 88.600500 3 2423 2 chr7D.!!$F1 2420
3 TraesCS7B01G449000 chr7D 617376588 617379406 2818 True 730.500000 2204 90.008500 340 2580 4 chr7D.!!$R2 2240
4 TraesCS7B01G449000 chr7A 710957877 710959672 1795 True 998.150000 1925 86.424500 821 2423 2 chr7A.!!$R2 1602
5 TraesCS7B01G449000 chr7A 711170983 711173678 2695 True 993.333333 2041 87.807333 3 2580 3 chr7A.!!$R3 2577
6 TraesCS7B01G449000 chr7A 6857431 6858160 729 True 865.000000 865 88.356000 2958 3673 1 chr7A.!!$R1 715
7 TraesCS7B01G449000 chrUn 241848525 241849809 1284 True 1528.000000 1528 88.235000 1141 2422 1 chrUn.!!$R1 1281
8 TraesCS7B01G449000 chr4A 599612138 599613428 1290 False 1528.000000 1528 88.136000 1135 2422 1 chr4A.!!$F1 1287
9 TraesCS7B01G449000 chr4A 24556163 24557414 1251 True 1179.000000 1179 83.715000 1161 2421 1 chr4A.!!$R1 1260
10 TraesCS7B01G449000 chr4D 443206699 443207947 1248 False 1173.000000 1173 83.703000 1161 2418 1 chr4D.!!$F1 1257
11 TraesCS7B01G449000 chr1B 667981973 667982684 711 True 874.000000 874 89.106000 1 703 1 chr1B.!!$R1 702
12 TraesCS7B01G449000 chr5B 54316627 54318565 1938 True 470.000000 701 92.471500 3006 3673 2 chr5B.!!$R2 667

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
606 974 0.104855 GCGAGGTGCCTATGATGACA 59.895 55.0 0.0 0.0 37.76 3.58 F
1116 2629 0.179100 CGGCGGAGATCATCAGTTGT 60.179 55.0 0.0 0.0 0.00 3.32 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2496 4021 0.041576 GCAAACCAGAAACGACCGTC 60.042 55.0 0.00 0.00 0.00 4.79 R
2800 4325 0.033504 CTAAGGATGCGTACGGCCAT 59.966 55.0 18.39 12.64 42.61 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
52 59 9.071276 ACCATTTATATCCAAGTAAGCAATCAG 57.929 33.333 0.00 0.00 0.00 2.90
114 121 5.469084 ACGTAGGTGTCCAAAATTCTCTTTC 59.531 40.000 0.00 0.00 0.00 2.62
125 138 4.928661 AATTCTCTTTCGTTGGACATCG 57.071 40.909 0.00 0.00 0.00 3.84
129 142 0.796312 CTTTCGTTGGACATCGGTGG 59.204 55.000 0.00 0.00 0.00 4.61
139 152 0.609131 ACATCGGTGGCAAAGGAAGG 60.609 55.000 0.00 0.00 0.00 3.46
214 228 3.489180 AGACGACTCAACCTTATCACG 57.511 47.619 0.00 0.00 0.00 4.35
219 235 3.119602 CGACTCAACCTTATCACGGAAGA 60.120 47.826 0.00 0.00 0.00 2.87
227 243 5.374071 ACCTTATCACGGAAGAAACAAGTT 58.626 37.500 0.00 0.00 0.00 2.66
232 248 3.813166 TCACGGAAGAAACAAGTTGGATC 59.187 43.478 7.96 5.01 0.00 3.36
237 253 6.659242 ACGGAAGAAACAAGTTGGATCATTAT 59.341 34.615 7.96 0.00 0.00 1.28
258 274 8.789762 CATTATTCCATCTTATCTTGTGCATCA 58.210 33.333 0.00 0.00 0.00 3.07
476 839 4.447138 TCAACCTGTAACTGGATGGTTT 57.553 40.909 0.00 0.00 38.76 3.27
499 862 1.458927 GTTGGTTGTACCCCCAGCT 59.541 57.895 7.29 0.00 37.50 4.24
509 872 2.680370 CCCCCAGCTTACCAGGGAC 61.680 68.421 7.65 0.00 45.80 4.46
549 917 5.699001 ACACATGTGTATCTTGTAAAAGCGA 59.301 36.000 29.66 0.00 42.90 4.93
576 944 0.690192 TTTCAGTGGAAGGCGATGGA 59.310 50.000 0.00 0.00 33.82 3.41
606 974 0.104855 GCGAGGTGCCTATGATGACA 59.895 55.000 0.00 0.00 37.76 3.58
611 979 7.577689 GCGAGGTGCCTATGATGACATCATA 62.578 48.000 28.27 28.27 46.35 2.15
630 1006 5.286438 TCATAAATCACAATACCCGTCGAG 58.714 41.667 0.00 0.00 0.00 4.04
678 1056 4.084380 GGATATGATGTACATGTGTGCGTG 60.084 45.833 14.43 0.00 39.77 5.34
692 1072 1.455786 GTGCGTGTACATGTGAGTGTC 59.544 52.381 16.28 0.00 33.62 3.67
714 1511 6.370994 TGTCCGTGTTGTACTTTGTTTCTAAA 59.629 34.615 0.00 0.00 0.00 1.85
757 1554 4.710375 AGCTCAAAATCAATCATTGCCTCT 59.290 37.500 0.00 0.00 0.00 3.69
762 1559 7.218614 TCAAAATCAATCATTGCCTCTGTTTT 58.781 30.769 0.00 0.00 0.00 2.43
792 1589 9.052080 GTTCGACATTGAGAGTTTAATTAAAGC 57.948 33.333 10.92 6.74 0.00 3.51
868 2131 5.880332 AGTGATATGTTTGCGTAAATCACCT 59.120 36.000 19.93 9.87 34.74 4.00
869 2132 5.965334 GTGATATGTTTGCGTAAATCACCTG 59.035 40.000 15.38 0.00 30.99 4.00
895 2200 3.871594 ACCGCTGACTACAATTAATGCTC 59.128 43.478 0.00 0.00 0.00 4.26
902 2240 6.611381 TGACTACAATTAATGCTCTGTTTGC 58.389 36.000 0.00 0.00 0.00 3.68
907 2245 6.980593 ACAATTAATGCTCTGTTTGCACTAA 58.019 32.000 0.00 0.00 43.59 2.24
908 2246 7.432869 ACAATTAATGCTCTGTTTGCACTAAA 58.567 30.769 0.00 0.00 43.59 1.85
909 2247 7.596248 ACAATTAATGCTCTGTTTGCACTAAAG 59.404 33.333 0.00 0.00 43.59 1.85
910 2248 6.875948 TTAATGCTCTGTTTGCACTAAAGA 57.124 33.333 0.00 0.00 43.59 2.52
911 2249 4.756084 ATGCTCTGTTTGCACTAAAGAC 57.244 40.909 0.00 0.00 43.59 3.01
912 2250 3.808728 TGCTCTGTTTGCACTAAAGACT 58.191 40.909 0.00 0.00 35.31 3.24
913 2251 4.956085 TGCTCTGTTTGCACTAAAGACTA 58.044 39.130 0.00 0.00 35.31 2.59
914 2252 5.364778 TGCTCTGTTTGCACTAAAGACTAA 58.635 37.500 0.00 0.00 35.31 2.24
915 2253 5.466728 TGCTCTGTTTGCACTAAAGACTAAG 59.533 40.000 0.00 0.00 35.31 2.18
916 2254 5.467063 GCTCTGTTTGCACTAAAGACTAAGT 59.533 40.000 0.00 0.00 0.00 2.24
917 2255 6.645415 GCTCTGTTTGCACTAAAGACTAAGTA 59.355 38.462 0.00 0.00 0.00 2.24
963 2321 2.093447 ACCAAATCAAGACCCTAGCTCG 60.093 50.000 0.00 0.00 0.00 5.03
968 2326 5.416271 AATCAAGACCCTAGCTCGTAAAA 57.584 39.130 0.00 0.00 0.00 1.52
980 2338 6.968335 CCTAGCTCGTAAAAGAAAGAGTACTC 59.032 42.308 15.41 15.41 33.57 2.59
981 2339 6.578163 AGCTCGTAAAAGAAAGAGTACTCT 57.422 37.500 20.00 20.00 42.75 3.24
1012 2507 3.558411 GCAGCATGAGGTCGTCGC 61.558 66.667 0.00 0.00 39.69 5.19
1013 2508 2.887568 CAGCATGAGGTCGTCGCC 60.888 66.667 0.00 0.00 39.69 5.54
1028 2541 2.032681 GCCGGTCAAGCTCAAGGT 59.967 61.111 1.90 0.00 0.00 3.50
1052 2565 1.663379 TACCGGCTGATCGTGGACAG 61.663 60.000 0.00 0.00 37.22 3.51
1113 2626 2.502492 CCCGGCGGAGATCATCAGT 61.502 63.158 30.79 0.00 0.00 3.41
1116 2629 0.179100 CGGCGGAGATCATCAGTTGT 60.179 55.000 0.00 0.00 0.00 3.32
1128 2644 0.541063 TCAGTTGTCTCCGGCCAGTA 60.541 55.000 2.24 0.00 0.00 2.74
1227 2752 4.717629 TTCGACACCTCGCCGCTG 62.718 66.667 0.00 0.00 39.96 5.18
1380 2905 1.153369 CCACTTCATCCCGACGCAT 60.153 57.895 0.00 0.00 0.00 4.73
1561 3086 3.530265 TCGTGAACAAGTACAACCTGT 57.470 42.857 0.00 0.00 0.00 4.00
1656 3181 2.583441 CCTCCTGCAGGTCGTTCCA 61.583 63.158 31.58 10.30 37.53 3.53
1899 3424 1.301479 GGACGAGCAAGGGAACGTT 60.301 57.895 0.00 0.00 39.04 3.99
2364 3889 2.755064 CGCAACATCCATGGGCCA 60.755 61.111 9.61 9.61 0.00 5.36
2433 3958 2.217429 GCCACTAGCAGCTTACTCTC 57.783 55.000 0.00 0.00 42.97 3.20
2434 3959 1.754226 GCCACTAGCAGCTTACTCTCT 59.246 52.381 0.00 0.00 42.97 3.10
2435 3960 2.952978 GCCACTAGCAGCTTACTCTCTA 59.047 50.000 0.00 0.00 42.97 2.43
2436 3961 3.572255 GCCACTAGCAGCTTACTCTCTAT 59.428 47.826 0.00 0.00 42.97 1.98
2437 3962 4.558496 GCCACTAGCAGCTTACTCTCTATG 60.558 50.000 0.00 0.00 42.97 2.23
2438 3963 4.545610 CACTAGCAGCTTACTCTCTATGC 58.454 47.826 0.00 0.00 0.00 3.14
2439 3964 4.278170 CACTAGCAGCTTACTCTCTATGCT 59.722 45.833 0.00 2.80 45.35 3.79
2440 3965 5.471797 CACTAGCAGCTTACTCTCTATGCTA 59.528 44.000 0.00 4.80 43.34 3.49
2441 3966 4.846779 AGCAGCTTACTCTCTATGCTAC 57.153 45.455 0.00 0.00 41.90 3.58
2442 3967 4.211125 AGCAGCTTACTCTCTATGCTACA 58.789 43.478 0.00 0.00 41.90 2.74
2443 3968 4.278170 AGCAGCTTACTCTCTATGCTACAG 59.722 45.833 0.00 0.00 41.90 2.74
2448 3973 6.485313 AGCTTACTCTCTATGCTACAGTACAG 59.515 42.308 0.00 0.00 31.71 2.74
2449 3974 6.621316 TTACTCTCTATGCTACAGTACAGC 57.379 41.667 0.00 0.00 39.56 4.40
2486 4011 5.622770 GACGGTGGTCTAAACATGAAAAT 57.377 39.130 0.00 0.00 40.15 1.82
2491 4016 8.079809 ACGGTGGTCTAAACATGAAAATTAAAG 58.920 33.333 0.00 0.00 0.00 1.85
2496 4021 7.545615 GGTCTAAACATGAAAATTAAAGCCCAG 59.454 37.037 0.00 0.00 0.00 4.45
2533 4058 6.460664 GTTTGCAACCATTGTAATTGTACC 57.539 37.500 0.00 0.00 35.23 3.34
2534 4059 6.220201 GTTTGCAACCATTGTAATTGTACCT 58.780 36.000 0.00 0.00 35.23 3.08
2535 4060 5.637006 TGCAACCATTGTAATTGTACCTC 57.363 39.130 0.00 0.00 0.00 3.85
2536 4061 4.461081 TGCAACCATTGTAATTGTACCTCC 59.539 41.667 0.00 0.00 0.00 4.30
2537 4062 4.461081 GCAACCATTGTAATTGTACCTCCA 59.539 41.667 0.00 0.00 0.00 3.86
2543 4068 5.637006 TTGTAATTGTACCTCCAATGTGC 57.363 39.130 0.00 0.00 35.30 4.57
2544 4069 4.917385 TGTAATTGTACCTCCAATGTGCT 58.083 39.130 0.00 0.00 35.30 4.40
2547 4072 3.788227 TTGTACCTCCAATGTGCTCTT 57.212 42.857 0.00 0.00 0.00 2.85
2550 4075 3.580895 TGTACCTCCAATGTGCTCTTACA 59.419 43.478 0.00 0.00 34.63 2.41
2553 4078 5.636903 ACCTCCAATGTGCTCTTACATAT 57.363 39.130 0.00 0.00 40.24 1.78
2554 4079 6.747414 ACCTCCAATGTGCTCTTACATATA 57.253 37.500 0.00 0.00 40.24 0.86
2556 4081 7.749666 ACCTCCAATGTGCTCTTACATATATT 58.250 34.615 0.00 0.00 40.24 1.28
2570 4095 9.923143 TCTTACATATATTCCATGTAACCGAAG 57.077 33.333 5.73 0.25 41.58 3.79
2588 4113 5.993106 CGAAGGTCTCTTTTTGTCTCTTT 57.007 39.130 0.00 0.00 32.52 2.52
2589 4114 6.364945 CGAAGGTCTCTTTTTGTCTCTTTT 57.635 37.500 0.00 0.00 32.52 2.27
2590 4115 6.195165 CGAAGGTCTCTTTTTGTCTCTTTTG 58.805 40.000 0.00 0.00 32.52 2.44
2591 4116 5.506686 AGGTCTCTTTTTGTCTCTTTTGC 57.493 39.130 0.00 0.00 0.00 3.68
2592 4117 4.949856 AGGTCTCTTTTTGTCTCTTTTGCA 59.050 37.500 0.00 0.00 0.00 4.08
2593 4118 5.067023 AGGTCTCTTTTTGTCTCTTTTGCAG 59.933 40.000 0.00 0.00 0.00 4.41
2594 4119 5.066505 GGTCTCTTTTTGTCTCTTTTGCAGA 59.933 40.000 0.00 0.00 0.00 4.26
2604 4129 2.775890 TCTTTTGCAGAGAGAGCCTTG 58.224 47.619 0.00 0.00 0.00 3.61
2605 4130 1.811359 CTTTTGCAGAGAGAGCCTTGG 59.189 52.381 0.00 0.00 0.00 3.61
2606 4131 0.607489 TTTGCAGAGAGAGCCTTGGC 60.607 55.000 2.97 2.97 0.00 4.52
2607 4132 1.486997 TTGCAGAGAGAGCCTTGGCT 61.487 55.000 14.69 14.69 0.00 4.75
2608 4133 1.153389 GCAGAGAGAGCCTTGGCTC 60.153 63.158 28.67 28.67 37.11 4.70
2610 4135 0.176219 CAGAGAGAGCCTTGGCTCTG 59.824 60.000 39.00 25.27 45.91 3.35
2611 4136 0.252193 AGAGAGAGCCTTGGCTCTGT 60.252 55.000 39.00 35.70 45.91 3.41
2612 4137 0.108233 GAGAGAGCCTTGGCTCTGTG 60.108 60.000 39.00 0.00 45.91 3.66
2613 4138 1.078567 GAGAGCCTTGGCTCTGTGG 60.079 63.158 39.00 0.55 45.91 4.17
2614 4139 1.835927 GAGAGCCTTGGCTCTGTGGT 61.836 60.000 39.00 21.29 45.91 4.16
2615 4140 1.073897 GAGCCTTGGCTCTGTGGTT 59.926 57.895 28.61 0.04 34.30 3.67
2616 4141 1.228367 AGCCTTGGCTCTGTGGTTG 60.228 57.895 8.56 0.00 0.00 3.77
2617 4142 2.270986 GCCTTGGCTCTGTGGTTGG 61.271 63.158 4.11 0.00 0.00 3.77
2618 4143 1.604593 CCTTGGCTCTGTGGTTGGG 60.605 63.158 0.00 0.00 0.00 4.12
2619 4144 1.151450 CTTGGCTCTGTGGTTGGGT 59.849 57.895 0.00 0.00 0.00 4.51
2620 4145 0.400213 CTTGGCTCTGTGGTTGGGTA 59.600 55.000 0.00 0.00 0.00 3.69
2621 4146 1.004745 CTTGGCTCTGTGGTTGGGTAT 59.995 52.381 0.00 0.00 0.00 2.73
2622 4147 0.327924 TGGCTCTGTGGTTGGGTATG 59.672 55.000 0.00 0.00 0.00 2.39
2623 4148 1.032114 GGCTCTGTGGTTGGGTATGC 61.032 60.000 0.00 0.00 0.00 3.14
2624 4149 1.369091 GCTCTGTGGTTGGGTATGCG 61.369 60.000 0.00 0.00 0.00 4.73
2625 4150 0.744414 CTCTGTGGTTGGGTATGCGG 60.744 60.000 0.00 0.00 0.00 5.69
2626 4151 1.002624 CTGTGGTTGGGTATGCGGT 60.003 57.895 0.00 0.00 0.00 5.68
2627 4152 0.608035 CTGTGGTTGGGTATGCGGTT 60.608 55.000 0.00 0.00 0.00 4.44
2628 4153 0.891449 TGTGGTTGGGTATGCGGTTG 60.891 55.000 0.00 0.00 0.00 3.77
2629 4154 0.891904 GTGGTTGGGTATGCGGTTGT 60.892 55.000 0.00 0.00 0.00 3.32
2630 4155 0.891449 TGGTTGGGTATGCGGTTGTG 60.891 55.000 0.00 0.00 0.00 3.33
2631 4156 1.211709 GTTGGGTATGCGGTTGTGC 59.788 57.895 0.00 0.00 0.00 4.57
2639 4164 4.645921 GCGGTTGTGCAGCCCAAC 62.646 66.667 12.00 12.00 41.11 3.77
2640 4165 4.326766 CGGTTGTGCAGCCCAACG 62.327 66.667 13.76 6.46 42.42 4.10
2641 4166 2.904866 GGTTGTGCAGCCCAACGA 60.905 61.111 13.76 0.00 42.42 3.85
2642 4167 2.331451 GTTGTGCAGCCCAACGAC 59.669 61.111 4.90 0.00 33.57 4.34
2643 4168 2.186826 GTTGTGCAGCCCAACGACT 61.187 57.895 4.90 0.00 33.57 4.18
2644 4169 1.891919 TTGTGCAGCCCAACGACTC 60.892 57.895 0.00 0.00 0.00 3.36
2645 4170 3.414700 GTGCAGCCCAACGACTCG 61.415 66.667 0.00 0.00 0.00 4.18
2646 4171 3.611674 TGCAGCCCAACGACTCGA 61.612 61.111 5.20 0.00 0.00 4.04
2647 4172 2.811317 GCAGCCCAACGACTCGAG 60.811 66.667 11.84 11.84 0.00 4.04
2648 4173 2.651361 CAGCCCAACGACTCGAGT 59.349 61.111 20.18 20.18 0.00 4.18
2649 4174 1.006102 CAGCCCAACGACTCGAGTT 60.006 57.895 21.08 0.77 0.00 3.01
2650 4175 1.009389 CAGCCCAACGACTCGAGTTC 61.009 60.000 21.08 11.81 0.00 3.01
2651 4176 1.006571 GCCCAACGACTCGAGTTCA 60.007 57.895 21.08 0.00 0.00 3.18
2652 4177 0.599204 GCCCAACGACTCGAGTTCAA 60.599 55.000 21.08 0.00 0.00 2.69
2653 4178 1.939838 GCCCAACGACTCGAGTTCAAT 60.940 52.381 21.08 3.89 0.00 2.57
2654 4179 2.413837 CCCAACGACTCGAGTTCAATT 58.586 47.619 21.08 8.95 0.00 2.32
2655 4180 2.412089 CCCAACGACTCGAGTTCAATTC 59.588 50.000 21.08 4.47 0.00 2.17
2656 4181 2.412089 CCAACGACTCGAGTTCAATTCC 59.588 50.000 21.08 3.68 0.00 3.01
2657 4182 1.978542 ACGACTCGAGTTCAATTCCG 58.021 50.000 21.08 18.18 0.00 4.30
2658 4183 1.538512 ACGACTCGAGTTCAATTCCGA 59.461 47.619 21.08 0.00 0.00 4.55
2666 4191 6.642683 TCGAGTTCAATTCCGAGAATTAAC 57.357 37.500 10.32 12.99 0.00 2.01
2667 4192 6.160684 TCGAGTTCAATTCCGAGAATTAACA 58.839 36.000 19.01 7.15 0.00 2.41
2668 4193 6.310467 TCGAGTTCAATTCCGAGAATTAACAG 59.690 38.462 19.01 15.60 0.00 3.16
2669 4194 6.455646 CGAGTTCAATTCCGAGAATTAACAGG 60.456 42.308 19.01 12.96 0.00 4.00
2670 4195 6.238648 AGTTCAATTCCGAGAATTAACAGGT 58.761 36.000 19.01 0.00 0.00 4.00
2671 4196 6.149474 AGTTCAATTCCGAGAATTAACAGGTG 59.851 38.462 19.01 8.55 0.00 4.00
2672 4197 5.800296 TCAATTCCGAGAATTAACAGGTGA 58.200 37.500 10.32 2.73 0.00 4.02
2673 4198 6.414732 TCAATTCCGAGAATTAACAGGTGAT 58.585 36.000 10.32 0.00 0.00 3.06
2674 4199 6.316140 TCAATTCCGAGAATTAACAGGTGATG 59.684 38.462 10.32 0.00 0.00 3.07
2675 4200 3.531538 TCCGAGAATTAACAGGTGATGC 58.468 45.455 0.00 0.00 0.00 3.91
2676 4201 3.055458 TCCGAGAATTAACAGGTGATGCA 60.055 43.478 0.00 0.00 0.00 3.96
2677 4202 3.310774 CCGAGAATTAACAGGTGATGCAG 59.689 47.826 0.00 0.00 0.00 4.41
2678 4203 4.183865 CGAGAATTAACAGGTGATGCAGA 58.816 43.478 0.00 0.00 0.00 4.26
2679 4204 4.269603 CGAGAATTAACAGGTGATGCAGAG 59.730 45.833 0.00 0.00 0.00 3.35
2680 4205 4.521146 AGAATTAACAGGTGATGCAGAGG 58.479 43.478 0.00 0.00 0.00 3.69
2681 4206 2.787473 TTAACAGGTGATGCAGAGGG 57.213 50.000 0.00 0.00 0.00 4.30
2682 4207 0.911769 TAACAGGTGATGCAGAGGGG 59.088 55.000 0.00 0.00 0.00 4.79
2683 4208 1.136329 AACAGGTGATGCAGAGGGGT 61.136 55.000 0.00 0.00 0.00 4.95
2684 4209 1.136329 ACAGGTGATGCAGAGGGGTT 61.136 55.000 0.00 0.00 0.00 4.11
2685 4210 0.038744 CAGGTGATGCAGAGGGGTTT 59.961 55.000 0.00 0.00 0.00 3.27
2686 4211 0.779997 AGGTGATGCAGAGGGGTTTT 59.220 50.000 0.00 0.00 0.00 2.43
2687 4212 1.177401 GGTGATGCAGAGGGGTTTTC 58.823 55.000 0.00 0.00 0.00 2.29
2688 4213 1.177401 GTGATGCAGAGGGGTTTTCC 58.823 55.000 0.00 0.00 39.75 3.13
2689 4214 1.075601 TGATGCAGAGGGGTTTTCCT 58.924 50.000 0.00 0.00 40.43 3.36
2701 4226 5.644977 GGGGTTTTCCTCTGTTTATTGAG 57.355 43.478 0.00 0.00 37.51 3.02
2713 4238 8.498054 CTCTGTTTATTGAGGATTAAGCTTGA 57.502 34.615 9.86 0.00 0.00 3.02
2714 4239 9.118300 CTCTGTTTATTGAGGATTAAGCTTGAT 57.882 33.333 9.86 6.27 0.00 2.57
2715 4240 8.896744 TCTGTTTATTGAGGATTAAGCTTGATG 58.103 33.333 8.68 0.00 0.00 3.07
2716 4241 8.579850 TGTTTATTGAGGATTAAGCTTGATGT 57.420 30.769 8.68 0.00 0.00 3.06
2717 4242 8.461222 TGTTTATTGAGGATTAAGCTTGATGTG 58.539 33.333 8.68 0.00 0.00 3.21
2718 4243 8.462016 GTTTATTGAGGATTAAGCTTGATGTGT 58.538 33.333 8.68 0.00 0.00 3.72
2719 4244 5.885230 TTGAGGATTAAGCTTGATGTGTG 57.115 39.130 8.68 0.00 0.00 3.82
2720 4245 5.164620 TGAGGATTAAGCTTGATGTGTGA 57.835 39.130 8.68 0.00 0.00 3.58
2721 4246 5.748402 TGAGGATTAAGCTTGATGTGTGAT 58.252 37.500 8.68 0.00 0.00 3.06
2722 4247 5.587443 TGAGGATTAAGCTTGATGTGTGATG 59.413 40.000 8.68 0.00 0.00 3.07
2723 4248 4.885907 AGGATTAAGCTTGATGTGTGATGG 59.114 41.667 8.68 0.00 0.00 3.51
2724 4249 4.883585 GGATTAAGCTTGATGTGTGATGGA 59.116 41.667 8.68 0.00 0.00 3.41
2725 4250 5.357878 GGATTAAGCTTGATGTGTGATGGAA 59.642 40.000 8.68 0.00 0.00 3.53
2726 4251 5.627499 TTAAGCTTGATGTGTGATGGAAC 57.373 39.130 9.86 0.00 0.00 3.62
2727 4252 2.440409 AGCTTGATGTGTGATGGAACC 58.560 47.619 0.00 0.00 0.00 3.62
2728 4253 2.161855 GCTTGATGTGTGATGGAACCA 58.838 47.619 0.00 0.00 0.00 3.67
2729 4254 2.095059 GCTTGATGTGTGATGGAACCAC 60.095 50.000 0.00 0.00 35.23 4.16
2730 4255 3.415212 CTTGATGTGTGATGGAACCACT 58.585 45.455 0.00 0.00 35.66 4.00
2731 4256 3.057969 TGATGTGTGATGGAACCACTC 57.942 47.619 0.00 0.00 35.66 3.51
2732 4257 2.371510 TGATGTGTGATGGAACCACTCA 59.628 45.455 0.00 0.00 40.69 3.41
2733 4258 3.009363 TGATGTGTGATGGAACCACTCAT 59.991 43.478 9.60 9.60 45.59 2.90
2734 4259 3.057969 TGTGTGATGGAACCACTCATC 57.942 47.619 0.00 0.00 39.94 2.92
2735 4260 2.371510 TGTGTGATGGAACCACTCATCA 59.628 45.455 0.00 0.00 44.95 3.07
2744 4269 9.288576 TGATGGAACCACTCATCAATAAATATC 57.711 33.333 3.84 0.00 44.41 1.63
2745 4270 9.512588 GATGGAACCACTCATCAATAAATATCT 57.487 33.333 0.00 0.00 39.47 1.98
2746 4271 9.872684 ATGGAACCACTCATCAATAAATATCTT 57.127 29.630 0.00 0.00 0.00 2.40
2747 4272 9.123902 TGGAACCACTCATCAATAAATATCTTG 57.876 33.333 0.00 0.00 0.00 3.02
2748 4273 9.342308 GGAACCACTCATCAATAAATATCTTGA 57.658 33.333 0.00 0.00 35.95 3.02
2784 4309 9.981114 AAAAATTTCGAGAACCATGTTTATCTT 57.019 25.926 0.00 0.00 0.00 2.40
2785 4310 8.970691 AAATTTCGAGAACCATGTTTATCTTG 57.029 30.769 0.00 0.00 0.00 3.02
2786 4311 6.494893 TTTCGAGAACCATGTTTATCTTGG 57.505 37.500 0.00 0.00 44.08 3.61
2797 4322 8.731275 CCATGTTTATCTTGGTACTCATACAA 57.269 34.615 0.00 0.00 36.83 2.41
2798 4323 9.173021 CCATGTTTATCTTGGTACTCATACAAA 57.827 33.333 0.00 0.00 36.83 2.83
2804 4329 6.509418 TCTTGGTACTCATACAAAAATGGC 57.491 37.500 0.00 0.00 32.40 4.40
2805 4330 5.417580 TCTTGGTACTCATACAAAAATGGCC 59.582 40.000 0.00 0.00 32.40 5.36
2806 4331 3.692101 TGGTACTCATACAAAAATGGCCG 59.308 43.478 0.00 0.00 32.40 6.13
2807 4332 3.692593 GGTACTCATACAAAAATGGCCGT 59.307 43.478 0.00 0.00 32.40 5.68
2808 4333 4.877251 GGTACTCATACAAAAATGGCCGTA 59.123 41.667 0.00 0.00 32.40 4.02
2809 4334 4.957759 ACTCATACAAAAATGGCCGTAC 57.042 40.909 0.00 0.00 0.00 3.67
2810 4335 3.372822 ACTCATACAAAAATGGCCGTACG 59.627 43.478 8.69 8.69 0.00 3.67
2811 4336 2.096174 TCATACAAAAATGGCCGTACGC 59.904 45.455 10.49 5.40 0.00 4.42
2812 4337 1.520494 TACAAAAATGGCCGTACGCA 58.480 45.000 10.49 3.59 40.31 5.24
2813 4338 0.885196 ACAAAAATGGCCGTACGCAT 59.115 45.000 10.49 6.13 40.31 4.73
2814 4339 1.135517 ACAAAAATGGCCGTACGCATC 60.136 47.619 10.49 1.71 40.31 3.91
2815 4340 0.454196 AAAAATGGCCGTACGCATCC 59.546 50.000 10.49 10.85 40.31 3.51
2816 4341 0.393808 AAAATGGCCGTACGCATCCT 60.394 50.000 10.49 0.00 40.31 3.24
2817 4342 0.393808 AAATGGCCGTACGCATCCTT 60.394 50.000 10.49 5.94 40.31 3.36
2818 4343 0.466543 AATGGCCGTACGCATCCTTA 59.533 50.000 10.49 0.00 40.31 2.69
2819 4344 0.033504 ATGGCCGTACGCATCCTTAG 59.966 55.000 10.49 0.00 40.31 2.18
2820 4345 1.324740 TGGCCGTACGCATCCTTAGT 61.325 55.000 10.49 0.00 40.31 2.24
2821 4346 0.179092 GGCCGTACGCATCCTTAGTT 60.179 55.000 10.49 0.00 40.31 2.24
2822 4347 0.928229 GCCGTACGCATCCTTAGTTG 59.072 55.000 10.49 0.00 37.47 3.16
2823 4348 1.567504 CCGTACGCATCCTTAGTTGG 58.432 55.000 10.49 0.00 0.00 3.77
2824 4349 1.134907 CCGTACGCATCCTTAGTTGGT 60.135 52.381 10.49 0.00 0.00 3.67
2825 4350 1.924524 CGTACGCATCCTTAGTTGGTG 59.075 52.381 0.52 0.00 0.00 4.17
2826 4351 1.664151 GTACGCATCCTTAGTTGGTGC 59.336 52.381 0.00 0.00 33.75 5.01
2827 4352 0.036164 ACGCATCCTTAGTTGGTGCA 59.964 50.000 0.00 0.00 35.43 4.57
2828 4353 0.729116 CGCATCCTTAGTTGGTGCAG 59.271 55.000 0.00 0.00 35.43 4.41
2829 4354 1.675714 CGCATCCTTAGTTGGTGCAGA 60.676 52.381 0.00 0.00 35.43 4.26
2830 4355 2.012673 GCATCCTTAGTTGGTGCAGAG 58.987 52.381 0.00 0.00 35.63 3.35
2831 4356 2.636830 CATCCTTAGTTGGTGCAGAGG 58.363 52.381 0.00 0.00 0.00 3.69
2832 4357 0.324943 TCCTTAGTTGGTGCAGAGGC 59.675 55.000 0.00 0.00 41.68 4.70
2833 4358 0.678048 CCTTAGTTGGTGCAGAGGCC 60.678 60.000 0.00 0.00 40.13 5.19
2834 4359 1.003839 TTAGTTGGTGCAGAGGCCG 60.004 57.895 0.00 0.00 40.13 6.13
2835 4360 2.463589 TTAGTTGGTGCAGAGGCCGG 62.464 60.000 0.00 0.00 40.13 6.13
2839 4364 4.785453 GGTGCAGAGGCCGGGAAG 62.785 72.222 2.18 0.00 40.13 3.46
2840 4365 4.021925 GTGCAGAGGCCGGGAAGT 62.022 66.667 2.18 0.00 40.13 3.01
2841 4366 4.020617 TGCAGAGGCCGGGAAGTG 62.021 66.667 2.18 0.00 40.13 3.16
2842 4367 4.785453 GCAGAGGCCGGGAAGTGG 62.785 72.222 2.18 0.00 0.00 4.00
2843 4368 3.003173 CAGAGGCCGGGAAGTGGA 61.003 66.667 2.18 0.00 0.00 4.02
2844 4369 2.203938 AGAGGCCGGGAAGTGGAA 60.204 61.111 2.18 0.00 0.00 3.53
2845 4370 1.846124 AGAGGCCGGGAAGTGGAAA 60.846 57.895 2.18 0.00 0.00 3.13
2846 4371 1.208165 AGAGGCCGGGAAGTGGAAAT 61.208 55.000 2.18 0.00 0.00 2.17
2847 4372 0.748367 GAGGCCGGGAAGTGGAAATC 60.748 60.000 2.18 0.00 0.00 2.17
2848 4373 1.208165 AGGCCGGGAAGTGGAAATCT 61.208 55.000 2.18 0.00 0.00 2.40
2849 4374 0.748367 GGCCGGGAAGTGGAAATCTC 60.748 60.000 2.18 0.00 0.00 2.75
2850 4375 0.253327 GCCGGGAAGTGGAAATCTCT 59.747 55.000 2.18 0.00 0.00 3.10
2851 4376 1.744114 GCCGGGAAGTGGAAATCTCTC 60.744 57.143 2.18 0.00 0.00 3.20
2852 4377 1.834263 CCGGGAAGTGGAAATCTCTCT 59.166 52.381 0.00 0.00 0.00 3.10
2853 4378 2.159028 CCGGGAAGTGGAAATCTCTCTC 60.159 54.545 0.00 0.00 0.00 3.20
2854 4379 2.497675 CGGGAAGTGGAAATCTCTCTCA 59.502 50.000 0.00 0.00 0.00 3.27
2855 4380 3.133721 CGGGAAGTGGAAATCTCTCTCAT 59.866 47.826 0.00 0.00 0.00 2.90
2856 4381 4.383552 CGGGAAGTGGAAATCTCTCTCATT 60.384 45.833 0.00 0.00 0.00 2.57
2857 4382 5.504853 GGGAAGTGGAAATCTCTCTCATTT 58.495 41.667 0.00 0.00 0.00 2.32
2858 4383 5.948758 GGGAAGTGGAAATCTCTCTCATTTT 59.051 40.000 0.00 0.00 0.00 1.82
2859 4384 7.112779 GGGAAGTGGAAATCTCTCTCATTTTA 58.887 38.462 0.00 0.00 0.00 1.52
2860 4385 7.611855 GGGAAGTGGAAATCTCTCTCATTTTAA 59.388 37.037 0.00 0.00 0.00 1.52
2861 4386 8.672815 GGAAGTGGAAATCTCTCTCATTTTAAG 58.327 37.037 0.00 0.00 0.00 1.85
2862 4387 8.572855 AAGTGGAAATCTCTCTCATTTTAAGG 57.427 34.615 0.00 0.00 0.00 2.69
2863 4388 6.601217 AGTGGAAATCTCTCTCATTTTAAGGC 59.399 38.462 0.00 0.00 0.00 4.35
2864 4389 5.888161 TGGAAATCTCTCTCATTTTAAGGCC 59.112 40.000 0.00 0.00 0.00 5.19
2865 4390 5.300539 GGAAATCTCTCTCATTTTAAGGCCC 59.699 44.000 0.00 0.00 0.00 5.80
2866 4391 3.543680 TCTCTCTCATTTTAAGGCCCG 57.456 47.619 0.00 0.00 0.00 6.13
2867 4392 3.104512 TCTCTCTCATTTTAAGGCCCGA 58.895 45.455 0.00 0.00 0.00 5.14
2868 4393 3.118738 TCTCTCTCATTTTAAGGCCCGAC 60.119 47.826 0.00 0.00 0.00 4.79
2869 4394 2.838202 TCTCTCATTTTAAGGCCCGACT 59.162 45.455 0.00 0.00 0.00 4.18
2870 4395 3.118738 TCTCTCATTTTAAGGCCCGACTC 60.119 47.826 0.00 0.00 0.00 3.36
2871 4396 2.093128 TCTCATTTTAAGGCCCGACTCC 60.093 50.000 0.00 0.00 0.00 3.85
2872 4397 1.064979 TCATTTTAAGGCCCGACTCCC 60.065 52.381 0.00 0.00 0.00 4.30
2873 4398 0.107361 ATTTTAAGGCCCGACTCCCG 60.107 55.000 0.00 0.00 38.18 5.14
2874 4399 1.482748 TTTTAAGGCCCGACTCCCGT 61.483 55.000 0.00 0.00 36.31 5.28
2875 4400 2.175035 TTTAAGGCCCGACTCCCGTG 62.175 60.000 0.00 0.00 36.31 4.94
2876 4401 3.892104 TAAGGCCCGACTCCCGTGT 62.892 63.158 0.00 0.00 36.31 4.49
2879 4404 4.736896 GCCCGACTCCCGTGTCAC 62.737 72.222 0.00 0.00 36.82 3.67
2880 4405 4.065281 CCCGACTCCCGTGTCACC 62.065 72.222 0.00 0.00 36.82 4.02
2881 4406 2.989824 CCGACTCCCGTGTCACCT 60.990 66.667 0.00 0.00 36.82 4.00
2882 4407 1.676635 CCGACTCCCGTGTCACCTA 60.677 63.158 0.00 0.00 36.82 3.08
2883 4408 1.505353 CGACTCCCGTGTCACCTAC 59.495 63.158 0.00 0.00 36.82 3.18
2884 4409 1.888736 GACTCCCGTGTCACCTACC 59.111 63.158 0.00 0.00 36.97 3.18
2885 4410 1.602327 GACTCCCGTGTCACCTACCC 61.602 65.000 0.00 0.00 36.97 3.69
2886 4411 2.677524 TCCCGTGTCACCTACCCG 60.678 66.667 0.00 0.00 0.00 5.28
2887 4412 2.993264 CCCGTGTCACCTACCCGT 60.993 66.667 0.00 0.00 0.00 5.28
2888 4413 2.260434 CCGTGTCACCTACCCGTG 59.740 66.667 0.00 0.00 34.93 4.94
2889 4414 2.270257 CCGTGTCACCTACCCGTGA 61.270 63.158 0.00 0.00 40.44 4.35
2890 4415 1.211969 CGTGTCACCTACCCGTGAG 59.788 63.158 0.00 0.00 43.26 3.51
2891 4416 1.080025 GTGTCACCTACCCGTGAGC 60.080 63.158 0.00 0.00 43.26 4.26
2892 4417 2.181021 GTCACCTACCCGTGAGCG 59.819 66.667 0.00 0.00 43.26 5.03
2893 4418 2.034532 TCACCTACCCGTGAGCGA 59.965 61.111 0.00 0.00 37.85 4.93
2894 4419 2.181021 CACCTACCCGTGAGCGAC 59.819 66.667 0.00 0.00 41.33 5.19
2895 4420 3.066814 ACCTACCCGTGAGCGACC 61.067 66.667 0.00 0.00 41.33 4.79
2896 4421 3.834799 CCTACCCGTGAGCGACCC 61.835 72.222 0.00 0.00 41.33 4.46
2897 4422 4.189188 CTACCCGTGAGCGACCCG 62.189 72.222 0.00 0.00 41.33 5.28
2898 4423 4.720902 TACCCGTGAGCGACCCGA 62.721 66.667 0.00 0.00 41.33 5.14
2901 4426 4.180946 CCGTGAGCGACCCGAGAG 62.181 72.222 0.00 0.00 41.33 3.20
2902 4427 3.125573 CGTGAGCGACCCGAGAGA 61.126 66.667 0.00 0.00 41.33 3.10
2903 4428 2.486042 GTGAGCGACCCGAGAGAC 59.514 66.667 0.00 0.00 0.00 3.36
2904 4429 2.033602 TGAGCGACCCGAGAGACA 59.966 61.111 0.00 0.00 0.00 3.41
2905 4430 2.333417 TGAGCGACCCGAGAGACAC 61.333 63.158 0.00 0.00 0.00 3.67
2906 4431 2.034376 AGCGACCCGAGAGACACT 59.966 61.111 0.00 0.00 0.00 3.55
2907 4432 1.984321 GAGCGACCCGAGAGACACTC 61.984 65.000 0.00 0.00 41.79 3.51
2908 4433 3.053849 GCGACCCGAGAGACACTCC 62.054 68.421 0.00 0.00 42.18 3.85
2909 4434 2.408241 CGACCCGAGAGACACTCCC 61.408 68.421 0.00 0.00 42.18 4.30
2910 4435 2.361357 ACCCGAGAGACACTCCCG 60.361 66.667 0.00 0.00 42.18 5.14
2911 4436 3.827898 CCCGAGAGACACTCCCGC 61.828 72.222 0.00 0.00 42.18 6.13
2912 4437 3.827898 CCGAGAGACACTCCCGCC 61.828 72.222 0.00 0.00 42.18 6.13
2913 4438 4.180946 CGAGAGACACTCCCGCCG 62.181 72.222 0.00 0.00 42.18 6.46
2914 4439 4.500116 GAGAGACACTCCCGCCGC 62.500 72.222 0.00 0.00 39.53 6.53
2931 4456 3.636231 CCACCGCCCAGTTCTCCA 61.636 66.667 0.00 0.00 0.00 3.86
2932 4457 2.046892 CACCGCCCAGTTCTCCAG 60.047 66.667 0.00 0.00 0.00 3.86
2933 4458 2.203788 ACCGCCCAGTTCTCCAGA 60.204 61.111 0.00 0.00 0.00 3.86
2934 4459 1.613630 ACCGCCCAGTTCTCCAGAT 60.614 57.895 0.00 0.00 0.00 2.90
2935 4460 1.144936 CCGCCCAGTTCTCCAGATC 59.855 63.158 0.00 0.00 0.00 2.75
2936 4461 1.144936 CGCCCAGTTCTCCAGATCC 59.855 63.158 0.00 0.00 0.00 3.36
2937 4462 1.333636 CGCCCAGTTCTCCAGATCCT 61.334 60.000 0.00 0.00 0.00 3.24
2938 4463 0.915364 GCCCAGTTCTCCAGATCCTT 59.085 55.000 0.00 0.00 0.00 3.36
2939 4464 1.407989 GCCCAGTTCTCCAGATCCTTG 60.408 57.143 0.00 0.00 0.00 3.61
2940 4465 1.211457 CCCAGTTCTCCAGATCCTTGG 59.789 57.143 0.00 0.00 39.70 3.61
2941 4466 1.407989 CCAGTTCTCCAGATCCTTGGC 60.408 57.143 0.00 0.00 38.16 4.52
2942 4467 1.558756 CAGTTCTCCAGATCCTTGGCT 59.441 52.381 0.00 0.00 38.16 4.75
2943 4468 1.836802 AGTTCTCCAGATCCTTGGCTC 59.163 52.381 0.00 0.00 38.16 4.70
2944 4469 1.134250 GTTCTCCAGATCCTTGGCTCC 60.134 57.143 0.00 0.00 38.16 4.70
2945 4470 0.692419 TCTCCAGATCCTTGGCTCCC 60.692 60.000 0.00 0.00 38.16 4.30
2946 4471 0.693767 CTCCAGATCCTTGGCTCCCT 60.694 60.000 0.00 0.00 38.16 4.20
2947 4472 0.692419 TCCAGATCCTTGGCTCCCTC 60.692 60.000 0.00 0.00 38.16 4.30
2948 4473 1.445095 CAGATCCTTGGCTCCCTCG 59.555 63.158 0.00 0.00 0.00 4.63
2949 4474 2.110006 GATCCTTGGCTCCCTCGC 59.890 66.667 0.00 0.00 0.00 5.03
3003 4528 4.764143 GCCCATGCCAAAGGTAGT 57.236 55.556 0.00 0.00 0.00 2.73
3005 4530 1.680338 GCCCATGCCAAAGGTAGTAG 58.320 55.000 0.00 0.00 0.00 2.57
3008 4533 1.680338 CATGCCAAAGGTAGTAGGGC 58.320 55.000 0.00 0.00 44.82 5.19
3015 4540 2.304761 CAAAGGTAGTAGGGCTGGTTCA 59.695 50.000 0.00 0.00 0.00 3.18
3018 4543 1.407025 GGTAGTAGGGCTGGTTCAAGC 60.407 57.143 0.00 0.00 42.75 4.01
3104 4629 1.883021 GCAACGGCAGCCATACTTT 59.117 52.632 13.30 0.00 40.72 2.66
3136 4661 2.265739 GCATGTGGAGGAGCACGA 59.734 61.111 0.00 0.00 0.00 4.35
3215 4742 2.044053 CCAACGGGGATGCCATGT 60.044 61.111 5.30 0.00 40.01 3.21
3241 4768 0.106268 TTTCCTGCAAAGGTGGCTCA 60.106 50.000 0.00 0.00 0.00 4.26
3242 4769 0.106268 TTCCTGCAAAGGTGGCTCAA 60.106 50.000 0.00 0.00 0.00 3.02
3322 4849 0.739813 GTGCTTCCTATCGTTGCGGT 60.740 55.000 0.00 0.00 0.00 5.68
3519 6337 6.128876 CGATGATGAGATGTAAACTGCAGATC 60.129 42.308 23.35 12.47 0.00 2.75
3536 6354 4.443621 CAGATCATGACTTGATGCAGAGT 58.556 43.478 8.47 0.00 45.29 3.24
3540 6358 5.603170 TCATGACTTGATGCAGAGTGATA 57.397 39.130 5.05 0.00 0.00 2.15
3547 6365 3.264947 TGATGCAGAGTGATAGTTGTGC 58.735 45.455 0.00 0.00 0.00 4.57
3556 6374 0.673644 GATAGTTGTGCAGTGGCGGT 60.674 55.000 0.00 0.00 45.35 5.68
3558 6376 2.034048 TAGTTGTGCAGTGGCGGTGA 62.034 55.000 0.00 0.00 45.35 4.02
3583 6401 0.256752 TGCATGTAGCTGCTGGGATT 59.743 50.000 13.43 0.00 45.94 3.01
3661 6479 3.069318 GTCTCGAGCTCCGGGGTT 61.069 66.667 7.81 0.00 39.77 4.11
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
52 59 6.866010 TTGAAGTGTATATCATGATGTGCC 57.134 37.500 18.72 9.17 0.00 5.01
81 88 2.105134 TGGACACCTACGTGATTGGTTT 59.895 45.455 0.00 0.00 43.14 3.27
84 91 2.465860 TTGGACACCTACGTGATTGG 57.534 50.000 0.00 0.00 43.14 3.16
91 98 5.389516 CGAAAGAGAATTTTGGACACCTACG 60.390 44.000 0.00 0.00 0.00 3.51
92 99 5.469084 ACGAAAGAGAATTTTGGACACCTAC 59.531 40.000 0.00 0.00 0.00 3.18
114 121 1.511318 TTTGCCACCGATGTCCAACG 61.511 55.000 0.00 0.00 0.00 4.10
129 142 3.062466 GGTCGGGCCTTCCTTTGC 61.062 66.667 0.84 0.00 0.00 3.68
139 152 1.298938 GTCTCGATAACGGTCGGGC 60.299 63.158 7.17 0.00 41.76 6.13
142 155 1.262683 GGGTAGTCTCGATAACGGTCG 59.737 57.143 0.00 1.38 42.74 4.79
214 228 7.976175 GGAATAATGATCCAACTTGTTTCTTCC 59.024 37.037 0.00 0.00 36.92 3.46
232 248 8.789762 TGATGCACAAGATAAGATGGAATAATG 58.210 33.333 0.00 0.00 0.00 1.90
237 253 5.499313 TGTGATGCACAAGATAAGATGGAA 58.501 37.500 0.00 0.00 41.69 3.53
258 274 7.309990 CCAGGATGATGTTTTAACCAAAGATGT 60.310 37.037 0.00 0.00 39.69 3.06
359 561 0.183014 TTAAACCTTGTGTGCGGGGA 59.817 50.000 0.00 0.00 0.00 4.81
452 662 5.772393 ACCATCCAGTTACAGGTTGATTA 57.228 39.130 6.45 0.00 0.00 1.75
464 827 3.117284 ACCAACCTACAAACCATCCAGTT 60.117 43.478 0.00 0.00 0.00 3.16
476 839 1.066471 GGGGGTACAACCAACCTACA 58.934 55.000 7.96 0.00 41.02 2.74
499 862 3.647590 ACCTTAAGTTTCGTCCCTGGTAA 59.352 43.478 0.97 0.00 0.00 2.85
509 872 5.681105 CACATGTGTCAAACCTTAAGTTTCG 59.319 40.000 18.03 0.00 45.85 3.46
549 917 4.003648 CGCCTTCCACTGAAAGAATAGTT 58.996 43.478 0.00 0.00 37.43 2.24
576 944 0.460987 GCACCTCGCTAGCAATGAGT 60.461 55.000 16.45 1.19 37.77 3.41
606 974 5.849510 TCGACGGGTATTGTGATTTATGAT 58.150 37.500 0.00 0.00 0.00 2.45
611 979 3.604875 ACTCGACGGGTATTGTGATTT 57.395 42.857 0.00 0.00 0.00 2.17
678 1056 2.433868 ACACGGACACTCACATGTAC 57.566 50.000 0.00 0.00 31.24 2.90
681 1059 1.581934 ACAACACGGACACTCACATG 58.418 50.000 0.00 0.00 0.00 3.21
683 1061 1.752498 AGTACAACACGGACACTCACA 59.248 47.619 0.00 0.00 0.00 3.58
714 1511 5.143369 AGCTCTTTTGGACCTGATCTTTTT 58.857 37.500 0.00 0.00 0.00 1.94
737 1534 5.988310 ACAGAGGCAATGATTGATTTTGA 57.012 34.783 9.76 0.00 0.00 2.69
757 1554 4.447290 TCTCAATGTCGAACAGGAAAACA 58.553 39.130 0.00 0.00 0.00 2.83
762 1559 4.336889 AAACTCTCAATGTCGAACAGGA 57.663 40.909 0.00 0.00 0.00 3.86
807 1741 4.600576 TCGTGTTGCTGCTCGGCA 62.601 61.111 0.00 0.00 40.74 5.69
808 1742 3.782244 CTCGTGTTGCTGCTCGGC 61.782 66.667 0.00 0.00 0.00 5.54
860 1803 1.202758 TCAGCGGTTGACAGGTGATTT 60.203 47.619 11.17 0.00 41.98 2.17
916 2254 9.752961 TGCGTTTAGTGCTTCAACTTATATATA 57.247 29.630 0.00 0.00 0.00 0.86
917 2255 8.548721 GTGCGTTTAGTGCTTCAACTTATATAT 58.451 33.333 0.00 0.00 0.00 0.86
927 2265 1.669604 TTGGTGCGTTTAGTGCTTCA 58.330 45.000 0.00 0.00 0.00 3.02
980 2338 6.585322 CCTCATGCTGCTTTTCTTTTTCTTAG 59.415 38.462 0.00 0.00 0.00 2.18
981 2339 6.040842 ACCTCATGCTGCTTTTCTTTTTCTTA 59.959 34.615 0.00 0.00 0.00 2.10
990 2350 1.129437 GACGACCTCATGCTGCTTTTC 59.871 52.381 0.00 0.00 0.00 2.29
1012 2507 1.738099 CGACCTTGAGCTTGACCGG 60.738 63.158 0.00 0.00 0.00 5.28
1013 2508 1.006102 ACGACCTTGAGCTTGACCG 60.006 57.895 0.00 0.00 0.00 4.79
1015 2510 2.059541 GTACACGACCTTGAGCTTGAC 58.940 52.381 0.00 0.00 0.00 3.18
1052 2565 2.512515 ATGAAGCGGCGAGGAAGC 60.513 61.111 12.98 0.00 0.00 3.86
1113 2626 1.669440 GTGTACTGGCCGGAGACAA 59.331 57.895 21.41 4.25 0.00 3.18
1116 2629 1.982395 CAGGTGTACTGGCCGGAGA 60.982 63.158 21.41 2.05 43.70 3.71
1128 2644 1.072159 GGCAGCAGAGAACAGGTGT 59.928 57.895 0.00 0.00 34.39 4.16
1228 2753 1.450531 GAAGCCATGGGGATGCGAAG 61.451 60.000 15.13 0.00 35.59 3.79
1380 2905 0.037734 TCTCGAGGGTGCAGTACTCA 59.962 55.000 13.56 0.00 29.64 3.41
1561 3086 1.153842 CGCTACGGATGTCACAGCA 60.154 57.895 0.00 0.00 32.46 4.41
1899 3424 1.361204 TCTTGCTGAGGTTGATCCCA 58.639 50.000 0.00 0.00 36.75 4.37
1950 3475 3.583054 CATCCTGGTGATGTTGGCT 57.417 52.632 0.00 0.00 44.91 4.75
2423 3948 6.358178 TGTACTGTAGCATAGAGAGTAAGCT 58.642 40.000 0.00 0.00 35.18 3.74
2424 3949 6.621316 TGTACTGTAGCATAGAGAGTAAGC 57.379 41.667 0.00 0.00 35.18 3.09
2425 3950 6.261158 TGCTGTACTGTAGCATAGAGAGTAAG 59.739 42.308 2.41 0.00 45.52 2.34
2426 3951 6.120220 TGCTGTACTGTAGCATAGAGAGTAA 58.880 40.000 2.41 0.00 45.52 2.24
2428 3953 4.527944 TGCTGTACTGTAGCATAGAGAGT 58.472 43.478 2.41 0.00 45.52 3.24
2437 3962 3.531538 TGGCTTTATGCTGTACTGTAGC 58.468 45.455 1.46 0.00 42.39 3.58
2438 3963 3.557595 GCTGGCTTTATGCTGTACTGTAG 59.442 47.826 1.46 0.00 42.39 2.74
2439 3964 3.531538 GCTGGCTTTATGCTGTACTGTA 58.468 45.455 1.46 0.00 42.39 2.74
2440 3965 2.359900 GCTGGCTTTATGCTGTACTGT 58.640 47.619 1.46 0.00 42.39 3.55
2441 3966 1.672881 GGCTGGCTTTATGCTGTACTG 59.327 52.381 0.00 0.00 42.39 2.74
2442 3967 1.408822 GGGCTGGCTTTATGCTGTACT 60.409 52.381 0.00 0.00 42.39 2.73
2443 3968 1.025041 GGGCTGGCTTTATGCTGTAC 58.975 55.000 0.00 0.00 42.39 2.90
2448 3973 1.718757 CGTCTGGGCTGGCTTTATGC 61.719 60.000 0.00 0.00 41.94 3.14
2449 3974 1.097547 CCGTCTGGGCTGGCTTTATG 61.098 60.000 0.00 0.00 0.00 1.90
2484 4009 1.002773 ACGACCGTCTGGGCTTTAATT 59.997 47.619 0.00 0.00 43.41 1.40
2486 4011 0.393820 AACGACCGTCTGGGCTTTAA 59.606 50.000 0.00 0.00 43.41 1.52
2491 4016 2.027625 CAGAAACGACCGTCTGGGC 61.028 63.158 0.00 0.00 41.42 5.36
2496 4021 0.041576 GCAAACCAGAAACGACCGTC 60.042 55.000 0.00 0.00 0.00 4.79
2528 4053 3.580895 TGTAAGAGCACATTGGAGGTACA 59.419 43.478 0.00 0.00 0.00 2.90
2531 4056 5.636903 ATATGTAAGAGCACATTGGAGGT 57.363 39.130 0.00 0.00 39.77 3.85
2532 4057 7.335422 GGAATATATGTAAGAGCACATTGGAGG 59.665 40.741 0.00 0.00 39.77 4.30
2533 4058 7.879677 TGGAATATATGTAAGAGCACATTGGAG 59.120 37.037 0.00 0.00 39.77 3.86
2534 4059 7.744733 TGGAATATATGTAAGAGCACATTGGA 58.255 34.615 0.00 0.00 39.77 3.53
2535 4060 7.984422 TGGAATATATGTAAGAGCACATTGG 57.016 36.000 0.00 0.00 39.77 3.16
2536 4061 9.006839 ACATGGAATATATGTAAGAGCACATTG 57.993 33.333 0.00 0.00 39.77 2.82
2543 4068 9.923143 TTCGGTTACATGGAATATATGTAAGAG 57.077 33.333 9.00 7.18 46.08 2.85
2544 4069 9.923143 CTTCGGTTACATGGAATATATGTAAGA 57.077 33.333 9.00 3.57 46.08 2.10
2547 4072 8.197592 ACCTTCGGTTACATGGAATATATGTA 57.802 34.615 0.00 0.00 39.36 2.29
2550 4075 7.455008 AGAGACCTTCGGTTACATGGAATATAT 59.545 37.037 0.00 0.00 35.25 0.86
2553 4078 4.960469 AGAGACCTTCGGTTACATGGAATA 59.040 41.667 0.00 0.00 35.25 1.75
2554 4079 3.775316 AGAGACCTTCGGTTACATGGAAT 59.225 43.478 0.00 0.00 35.25 3.01
2556 4081 2.816411 AGAGACCTTCGGTTACATGGA 58.184 47.619 0.00 0.00 35.25 3.41
2570 4095 5.066505 TCTGCAAAAGAGACAAAAAGAGACC 59.933 40.000 0.00 0.00 0.00 3.85
2584 4109 2.551721 CCAAGGCTCTCTCTGCAAAAGA 60.552 50.000 0.00 0.00 0.00 2.52
2585 4110 1.811359 CCAAGGCTCTCTCTGCAAAAG 59.189 52.381 0.00 0.00 0.00 2.27
2586 4111 1.901591 CCAAGGCTCTCTCTGCAAAA 58.098 50.000 0.00 0.00 0.00 2.44
2587 4112 0.607489 GCCAAGGCTCTCTCTGCAAA 60.607 55.000 3.29 0.00 38.26 3.68
2588 4113 1.002868 GCCAAGGCTCTCTCTGCAA 60.003 57.895 3.29 0.00 38.26 4.08
2589 4114 2.667418 GCCAAGGCTCTCTCTGCA 59.333 61.111 3.29 0.00 38.26 4.41
2599 4124 2.270986 CCAACCACAGAGCCAAGGC 61.271 63.158 2.02 2.02 42.33 4.35
2600 4125 1.604593 CCCAACCACAGAGCCAAGG 60.605 63.158 0.00 0.00 0.00 3.61
2601 4126 0.400213 TACCCAACCACAGAGCCAAG 59.600 55.000 0.00 0.00 0.00 3.61
2602 4127 1.072266 ATACCCAACCACAGAGCCAA 58.928 50.000 0.00 0.00 0.00 4.52
2603 4128 0.327924 CATACCCAACCACAGAGCCA 59.672 55.000 0.00 0.00 0.00 4.75
2604 4129 1.032114 GCATACCCAACCACAGAGCC 61.032 60.000 0.00 0.00 0.00 4.70
2605 4130 1.369091 CGCATACCCAACCACAGAGC 61.369 60.000 0.00 0.00 0.00 4.09
2606 4131 0.744414 CCGCATACCCAACCACAGAG 60.744 60.000 0.00 0.00 0.00 3.35
2607 4132 1.298340 CCGCATACCCAACCACAGA 59.702 57.895 0.00 0.00 0.00 3.41
2608 4133 0.608035 AACCGCATACCCAACCACAG 60.608 55.000 0.00 0.00 0.00 3.66
2609 4134 0.891449 CAACCGCATACCCAACCACA 60.891 55.000 0.00 0.00 0.00 4.17
2610 4135 0.891904 ACAACCGCATACCCAACCAC 60.892 55.000 0.00 0.00 0.00 4.16
2611 4136 0.891449 CACAACCGCATACCCAACCA 60.891 55.000 0.00 0.00 0.00 3.67
2612 4137 1.880186 CACAACCGCATACCCAACC 59.120 57.895 0.00 0.00 0.00 3.77
2613 4138 1.211709 GCACAACCGCATACCCAAC 59.788 57.895 0.00 0.00 0.00 3.77
2614 4139 1.228276 TGCACAACCGCATACCCAA 60.228 52.632 0.00 0.00 36.86 4.12
2615 4140 1.673993 CTGCACAACCGCATACCCA 60.674 57.895 0.00 0.00 42.06 4.51
2616 4141 3.051392 GCTGCACAACCGCATACCC 62.051 63.158 0.00 0.00 42.06 3.69
2617 4142 2.485122 GCTGCACAACCGCATACC 59.515 61.111 0.00 0.00 42.06 2.73
2618 4143 2.485122 GGCTGCACAACCGCATAC 59.515 61.111 0.50 0.00 42.06 2.39
2619 4144 2.749839 GGGCTGCACAACCGCATA 60.750 61.111 0.50 0.00 42.06 3.14
2620 4145 4.972733 TGGGCTGCACAACCGCAT 62.973 61.111 0.00 0.00 42.06 4.73
2622 4147 4.645921 GTTGGGCTGCACAACCGC 62.646 66.667 32.06 11.91 41.70 5.68
2623 4148 4.326766 CGTTGGGCTGCACAACCG 62.327 66.667 34.51 26.44 43.95 4.44
2624 4149 2.904866 TCGTTGGGCTGCACAACC 60.905 61.111 34.51 20.51 43.95 3.77
2625 4150 2.117941 GAGTCGTTGGGCTGCACAAC 62.118 60.000 32.25 32.25 43.52 3.32
2626 4151 1.891919 GAGTCGTTGGGCTGCACAA 60.892 57.895 14.32 14.32 0.00 3.33
2627 4152 2.280797 GAGTCGTTGGGCTGCACA 60.281 61.111 0.00 0.00 0.00 4.57
2628 4153 3.414700 CGAGTCGTTGGGCTGCAC 61.415 66.667 3.82 0.00 0.00 4.57
2629 4154 3.573772 CTCGAGTCGTTGGGCTGCA 62.574 63.158 13.12 0.00 0.00 4.41
2630 4155 2.811317 CTCGAGTCGTTGGGCTGC 60.811 66.667 13.12 0.00 0.00 5.25
2631 4156 1.006102 AACTCGAGTCGTTGGGCTG 60.006 57.895 20.33 0.00 0.00 4.85
2632 4157 1.289380 GAACTCGAGTCGTTGGGCT 59.711 57.895 20.33 0.00 0.00 5.19
2633 4158 0.599204 TTGAACTCGAGTCGTTGGGC 60.599 55.000 20.33 3.45 0.00 5.36
2634 4159 2.080286 ATTGAACTCGAGTCGTTGGG 57.920 50.000 20.33 4.45 0.00 4.12
2635 4160 2.412089 GGAATTGAACTCGAGTCGTTGG 59.588 50.000 20.33 6.88 0.00 3.77
2636 4161 2.090658 CGGAATTGAACTCGAGTCGTTG 59.909 50.000 20.33 9.38 0.00 4.10
2637 4162 2.030540 TCGGAATTGAACTCGAGTCGTT 60.031 45.455 20.33 11.09 0.00 3.85
2638 4163 1.538512 TCGGAATTGAACTCGAGTCGT 59.461 47.619 20.33 3.47 0.00 4.34
2639 4164 2.159558 TCTCGGAATTGAACTCGAGTCG 60.160 50.000 20.33 15.86 46.17 4.18
2640 4165 3.489180 TCTCGGAATTGAACTCGAGTC 57.511 47.619 20.33 12.81 46.17 3.36
2641 4166 3.936372 TTCTCGGAATTGAACTCGAGT 57.064 42.857 13.58 13.58 46.17 4.18
2643 4168 6.160684 TGTTAATTCTCGGAATTGAACTCGA 58.839 36.000 17.09 0.00 0.00 4.04
2644 4169 6.403333 TGTTAATTCTCGGAATTGAACTCG 57.597 37.500 17.09 0.00 0.00 4.18
2645 4170 6.371825 ACCTGTTAATTCTCGGAATTGAACTC 59.628 38.462 17.09 4.03 0.00 3.01
2646 4171 6.149474 CACCTGTTAATTCTCGGAATTGAACT 59.851 38.462 17.09 0.00 0.00 3.01
2647 4172 6.148811 TCACCTGTTAATTCTCGGAATTGAAC 59.851 38.462 17.09 15.91 0.00 3.18
2648 4173 6.234920 TCACCTGTTAATTCTCGGAATTGAA 58.765 36.000 17.09 8.48 0.00 2.69
2649 4174 5.800296 TCACCTGTTAATTCTCGGAATTGA 58.200 37.500 17.09 9.67 0.00 2.57
2650 4175 6.489675 CATCACCTGTTAATTCTCGGAATTG 58.510 40.000 17.09 6.94 0.00 2.32
2651 4176 5.066505 GCATCACCTGTTAATTCTCGGAATT 59.933 40.000 13.85 13.85 0.00 2.17
2652 4177 4.576463 GCATCACCTGTTAATTCTCGGAAT 59.424 41.667 0.00 0.00 0.00 3.01
2653 4178 3.938963 GCATCACCTGTTAATTCTCGGAA 59.061 43.478 0.00 0.00 0.00 4.30
2654 4179 3.055458 TGCATCACCTGTTAATTCTCGGA 60.055 43.478 0.00 0.00 0.00 4.55
2655 4180 3.270027 TGCATCACCTGTTAATTCTCGG 58.730 45.455 0.00 0.00 0.00 4.63
2656 4181 4.183865 TCTGCATCACCTGTTAATTCTCG 58.816 43.478 0.00 0.00 0.00 4.04
2657 4182 4.574013 CCTCTGCATCACCTGTTAATTCTC 59.426 45.833 0.00 0.00 0.00 2.87
2658 4183 4.521146 CCTCTGCATCACCTGTTAATTCT 58.479 43.478 0.00 0.00 0.00 2.40
2659 4184 3.629398 CCCTCTGCATCACCTGTTAATTC 59.371 47.826 0.00 0.00 0.00 2.17
2660 4185 3.624777 CCCTCTGCATCACCTGTTAATT 58.375 45.455 0.00 0.00 0.00 1.40
2661 4186 2.092212 CCCCTCTGCATCACCTGTTAAT 60.092 50.000 0.00 0.00 0.00 1.40
2662 4187 1.281867 CCCCTCTGCATCACCTGTTAA 59.718 52.381 0.00 0.00 0.00 2.01
2663 4188 0.911769 CCCCTCTGCATCACCTGTTA 59.088 55.000 0.00 0.00 0.00 2.41
2664 4189 1.136329 ACCCCTCTGCATCACCTGTT 61.136 55.000 0.00 0.00 0.00 3.16
2665 4190 1.136329 AACCCCTCTGCATCACCTGT 61.136 55.000 0.00 0.00 0.00 4.00
2666 4191 0.038744 AAACCCCTCTGCATCACCTG 59.961 55.000 0.00 0.00 0.00 4.00
2667 4192 0.779997 AAAACCCCTCTGCATCACCT 59.220 50.000 0.00 0.00 0.00 4.00
2668 4193 1.177401 GAAAACCCCTCTGCATCACC 58.823 55.000 0.00 0.00 0.00 4.02
2669 4194 1.177401 GGAAAACCCCTCTGCATCAC 58.823 55.000 0.00 0.00 0.00 3.06
2670 4195 1.075601 AGGAAAACCCCTCTGCATCA 58.924 50.000 0.00 0.00 34.66 3.07
2671 4196 3.987594 AGGAAAACCCCTCTGCATC 57.012 52.632 0.00 0.00 34.66 3.91
2678 4203 5.325239 CTCAATAAACAGAGGAAAACCCCT 58.675 41.667 0.00 0.00 39.77 4.79
2679 4204 4.462834 CCTCAATAAACAGAGGAAAACCCC 59.537 45.833 2.34 0.00 36.99 4.95
2680 4205 5.321927 TCCTCAATAAACAGAGGAAAACCC 58.678 41.667 8.62 0.00 40.50 4.11
2681 4206 7.468141 AATCCTCAATAAACAGAGGAAAACC 57.532 36.000 14.42 0.00 45.65 3.27
2683 4208 8.739972 GCTTAATCCTCAATAAACAGAGGAAAA 58.260 33.333 14.42 10.92 45.65 2.29
2684 4209 8.109634 AGCTTAATCCTCAATAAACAGAGGAAA 58.890 33.333 14.42 5.56 45.65 3.13
2685 4210 7.633789 AGCTTAATCCTCAATAAACAGAGGAA 58.366 34.615 14.42 0.00 45.65 3.36
2686 4211 7.200434 AGCTTAATCCTCAATAAACAGAGGA 57.800 36.000 13.00 13.00 46.44 3.71
2687 4212 7.554118 TCAAGCTTAATCCTCAATAAACAGAGG 59.446 37.037 0.00 2.10 36.22 3.69
2688 4213 8.498054 TCAAGCTTAATCCTCAATAAACAGAG 57.502 34.615 0.00 0.00 0.00 3.35
2689 4214 8.896744 CATCAAGCTTAATCCTCAATAAACAGA 58.103 33.333 0.00 0.00 0.00 3.41
2690 4215 8.680903 ACATCAAGCTTAATCCTCAATAAACAG 58.319 33.333 0.00 0.00 0.00 3.16
2691 4216 8.461222 CACATCAAGCTTAATCCTCAATAAACA 58.539 33.333 0.00 0.00 0.00 2.83
2692 4217 8.462016 ACACATCAAGCTTAATCCTCAATAAAC 58.538 33.333 0.00 0.00 0.00 2.01
2693 4218 8.461222 CACACATCAAGCTTAATCCTCAATAAA 58.539 33.333 0.00 0.00 0.00 1.40
2694 4219 7.828717 TCACACATCAAGCTTAATCCTCAATAA 59.171 33.333 0.00 0.00 0.00 1.40
2695 4220 7.337938 TCACACATCAAGCTTAATCCTCAATA 58.662 34.615 0.00 0.00 0.00 1.90
2696 4221 6.182627 TCACACATCAAGCTTAATCCTCAAT 58.817 36.000 0.00 0.00 0.00 2.57
2697 4222 5.559770 TCACACATCAAGCTTAATCCTCAA 58.440 37.500 0.00 0.00 0.00 3.02
2698 4223 5.164620 TCACACATCAAGCTTAATCCTCA 57.835 39.130 0.00 0.00 0.00 3.86
2699 4224 5.008415 CCATCACACATCAAGCTTAATCCTC 59.992 44.000 0.00 0.00 0.00 3.71
2700 4225 4.885907 CCATCACACATCAAGCTTAATCCT 59.114 41.667 0.00 0.00 0.00 3.24
2701 4226 4.883585 TCCATCACACATCAAGCTTAATCC 59.116 41.667 0.00 0.00 0.00 3.01
2702 4227 6.261118 GTTCCATCACACATCAAGCTTAATC 58.739 40.000 0.00 0.00 0.00 1.75
2703 4228 5.126061 GGTTCCATCACACATCAAGCTTAAT 59.874 40.000 0.00 0.00 0.00 1.40
2704 4229 4.458989 GGTTCCATCACACATCAAGCTTAA 59.541 41.667 0.00 0.00 0.00 1.85
2705 4230 4.009675 GGTTCCATCACACATCAAGCTTA 58.990 43.478 0.00 0.00 0.00 3.09
2706 4231 2.821969 GGTTCCATCACACATCAAGCTT 59.178 45.455 0.00 0.00 0.00 3.74
2707 4232 2.224843 TGGTTCCATCACACATCAAGCT 60.225 45.455 0.00 0.00 0.00 3.74
2708 4233 2.095059 GTGGTTCCATCACACATCAAGC 60.095 50.000 0.00 0.00 35.30 4.01
2709 4234 3.415212 AGTGGTTCCATCACACATCAAG 58.585 45.455 0.00 0.00 37.58 3.02
2710 4235 3.181446 TGAGTGGTTCCATCACACATCAA 60.181 43.478 0.00 0.00 37.58 2.57
2711 4236 2.371510 TGAGTGGTTCCATCACACATCA 59.628 45.455 0.00 0.00 37.58 3.07
2712 4237 3.057969 TGAGTGGTTCCATCACACATC 57.942 47.619 0.00 0.00 37.58 3.06
2713 4238 3.009363 TGATGAGTGGTTCCATCACACAT 59.991 43.478 6.80 6.80 44.67 3.21
2714 4239 2.371510 TGATGAGTGGTTCCATCACACA 59.628 45.455 0.00 0.00 42.76 3.72
2715 4240 3.057969 TGATGAGTGGTTCCATCACAC 57.942 47.619 0.00 0.00 42.76 3.82
2716 4241 3.786368 TTGATGAGTGGTTCCATCACA 57.214 42.857 0.00 0.00 45.97 3.58
2717 4242 6.757897 TTTATTGATGAGTGGTTCCATCAC 57.242 37.500 0.00 0.00 45.97 3.06
2718 4243 9.288576 GATATTTATTGATGAGTGGTTCCATCA 57.711 33.333 0.00 0.00 45.03 3.07
2719 4244 9.512588 AGATATTTATTGATGAGTGGTTCCATC 57.487 33.333 0.00 0.00 39.55 3.51
2720 4245 9.872684 AAGATATTTATTGATGAGTGGTTCCAT 57.127 29.630 0.00 0.00 0.00 3.41
2721 4246 9.123902 CAAGATATTTATTGATGAGTGGTTCCA 57.876 33.333 0.00 0.00 0.00 3.53
2722 4247 9.342308 TCAAGATATTTATTGATGAGTGGTTCC 57.658 33.333 0.00 0.00 30.67 3.62
2758 4283 9.981114 AAGATAAACATGGTTCTCGAAATTTTT 57.019 25.926 0.00 0.00 0.00 1.94
2759 4284 9.410556 CAAGATAAACATGGTTCTCGAAATTTT 57.589 29.630 0.00 0.00 0.00 1.82
2760 4285 8.028938 CCAAGATAAACATGGTTCTCGAAATTT 58.971 33.333 0.00 0.00 33.27 1.82
2761 4286 7.176690 ACCAAGATAAACATGGTTCTCGAAATT 59.823 33.333 0.00 0.00 46.61 1.82
2762 4287 6.659242 ACCAAGATAAACATGGTTCTCGAAAT 59.341 34.615 0.00 0.00 46.61 2.17
2763 4288 6.001460 ACCAAGATAAACATGGTTCTCGAAA 58.999 36.000 0.00 0.00 46.61 3.46
2764 4289 5.556915 ACCAAGATAAACATGGTTCTCGAA 58.443 37.500 0.00 0.00 46.61 3.71
2765 4290 5.160607 ACCAAGATAAACATGGTTCTCGA 57.839 39.130 0.00 0.00 46.61 4.04
2766 4291 6.106673 AGTACCAAGATAAACATGGTTCTCG 58.893 40.000 0.00 0.00 46.61 4.04
2767 4292 7.541122 GAGTACCAAGATAAACATGGTTCTC 57.459 40.000 0.00 12.82 46.61 2.87
2768 4293 7.016153 TGAGTACCAAGATAAACATGGTTCT 57.984 36.000 0.00 2.58 46.61 3.01
2769 4294 7.865706 ATGAGTACCAAGATAAACATGGTTC 57.134 36.000 0.00 0.00 46.61 3.62
2770 4295 8.325787 TGTATGAGTACCAAGATAAACATGGTT 58.674 33.333 0.00 0.00 46.61 3.67
2772 4297 8.731275 TTGTATGAGTACCAAGATAAACATGG 57.269 34.615 0.00 0.00 42.35 3.66
2778 4303 8.682710 GCCATTTTTGTATGAGTACCAAGATAA 58.317 33.333 0.00 0.00 0.00 1.75
2779 4304 7.284489 GGCCATTTTTGTATGAGTACCAAGATA 59.716 37.037 0.00 0.00 0.00 1.98
2780 4305 6.096846 GGCCATTTTTGTATGAGTACCAAGAT 59.903 38.462 0.00 0.00 0.00 2.40
2781 4306 5.417580 GGCCATTTTTGTATGAGTACCAAGA 59.582 40.000 0.00 0.00 0.00 3.02
2782 4307 5.650543 GGCCATTTTTGTATGAGTACCAAG 58.349 41.667 0.00 0.00 0.00 3.61
2783 4308 4.156922 CGGCCATTTTTGTATGAGTACCAA 59.843 41.667 2.24 0.00 0.00 3.67
2784 4309 3.692101 CGGCCATTTTTGTATGAGTACCA 59.308 43.478 2.24 0.00 0.00 3.25
2785 4310 3.692593 ACGGCCATTTTTGTATGAGTACC 59.307 43.478 2.24 0.00 0.00 3.34
2786 4311 4.957759 ACGGCCATTTTTGTATGAGTAC 57.042 40.909 2.24 0.00 0.00 2.73
2787 4312 4.567558 CGTACGGCCATTTTTGTATGAGTA 59.432 41.667 7.57 0.00 0.00 2.59
2788 4313 3.372822 CGTACGGCCATTTTTGTATGAGT 59.627 43.478 7.57 0.00 0.00 3.41
2789 4314 3.787476 GCGTACGGCCATTTTTGTATGAG 60.787 47.826 18.39 0.00 34.80 2.90
2790 4315 2.096174 GCGTACGGCCATTTTTGTATGA 59.904 45.455 18.39 0.00 34.80 2.15
2791 4316 2.159503 TGCGTACGGCCATTTTTGTATG 60.160 45.455 18.39 2.17 42.61 2.39
2792 4317 2.085320 TGCGTACGGCCATTTTTGTAT 58.915 42.857 18.39 0.00 42.61 2.29
2793 4318 1.520494 TGCGTACGGCCATTTTTGTA 58.480 45.000 18.39 0.00 42.61 2.41
2794 4319 0.885196 ATGCGTACGGCCATTTTTGT 59.115 45.000 18.39 0.00 42.61 2.83
2795 4320 1.544686 GATGCGTACGGCCATTTTTG 58.455 50.000 18.39 0.00 42.61 2.44
2796 4321 0.454196 GGATGCGTACGGCCATTTTT 59.546 50.000 18.39 0.00 42.61 1.94
2797 4322 0.393808 AGGATGCGTACGGCCATTTT 60.394 50.000 18.39 2.85 42.61 1.82
2798 4323 0.393808 AAGGATGCGTACGGCCATTT 60.394 50.000 18.39 2.56 42.61 2.32
2799 4324 0.466543 TAAGGATGCGTACGGCCATT 59.533 50.000 18.39 1.85 42.61 3.16
2800 4325 0.033504 CTAAGGATGCGTACGGCCAT 59.966 55.000 18.39 12.64 42.61 4.40
2801 4326 1.324740 ACTAAGGATGCGTACGGCCA 61.325 55.000 18.39 7.77 42.61 5.36
2802 4327 0.179092 AACTAAGGATGCGTACGGCC 60.179 55.000 18.39 1.18 42.61 6.13
2803 4328 0.928229 CAACTAAGGATGCGTACGGC 59.072 55.000 18.39 9.98 43.96 5.68
2804 4329 1.134907 ACCAACTAAGGATGCGTACGG 60.135 52.381 18.39 0.00 0.00 4.02
2805 4330 1.924524 CACCAACTAAGGATGCGTACG 59.075 52.381 11.84 11.84 0.00 3.67
2806 4331 1.664151 GCACCAACTAAGGATGCGTAC 59.336 52.381 0.00 0.00 0.00 3.67
2807 4332 1.276705 TGCACCAACTAAGGATGCGTA 59.723 47.619 0.00 0.00 39.18 4.42
2808 4333 0.036164 TGCACCAACTAAGGATGCGT 59.964 50.000 0.00 0.00 39.18 5.24
2809 4334 0.729116 CTGCACCAACTAAGGATGCG 59.271 55.000 0.00 0.00 39.18 4.73
2810 4335 2.012673 CTCTGCACCAACTAAGGATGC 58.987 52.381 0.00 0.00 36.81 3.91
2811 4336 2.636830 CCTCTGCACCAACTAAGGATG 58.363 52.381 0.00 0.00 0.00 3.51
2812 4337 1.065126 GCCTCTGCACCAACTAAGGAT 60.065 52.381 0.00 0.00 37.47 3.24
2813 4338 0.324943 GCCTCTGCACCAACTAAGGA 59.675 55.000 0.00 0.00 37.47 3.36
2814 4339 0.678048 GGCCTCTGCACCAACTAAGG 60.678 60.000 0.00 0.00 40.13 2.69
2815 4340 1.021390 CGGCCTCTGCACCAACTAAG 61.021 60.000 0.00 0.00 40.13 2.18
2816 4341 1.003839 CGGCCTCTGCACCAACTAA 60.004 57.895 0.00 0.00 40.13 2.24
2817 4342 2.662596 CGGCCTCTGCACCAACTA 59.337 61.111 0.00 0.00 40.13 2.24
2818 4343 4.335647 CCGGCCTCTGCACCAACT 62.336 66.667 0.00 0.00 40.13 3.16
2822 4347 4.785453 CTTCCCGGCCTCTGCACC 62.785 72.222 0.00 0.00 40.13 5.01
2823 4348 4.021925 ACTTCCCGGCCTCTGCAC 62.022 66.667 0.00 0.00 40.13 4.57
2824 4349 4.020617 CACTTCCCGGCCTCTGCA 62.021 66.667 0.00 0.00 40.13 4.41
2825 4350 4.785453 CCACTTCCCGGCCTCTGC 62.785 72.222 0.00 0.00 0.00 4.26
2826 4351 2.124507 TTTCCACTTCCCGGCCTCTG 62.125 60.000 0.00 0.00 0.00 3.35
2827 4352 1.208165 ATTTCCACTTCCCGGCCTCT 61.208 55.000 0.00 0.00 0.00 3.69
2828 4353 0.748367 GATTTCCACTTCCCGGCCTC 60.748 60.000 0.00 0.00 0.00 4.70
2829 4354 1.208165 AGATTTCCACTTCCCGGCCT 61.208 55.000 0.00 0.00 0.00 5.19
2830 4355 0.748367 GAGATTTCCACTTCCCGGCC 60.748 60.000 0.00 0.00 0.00 6.13
2831 4356 0.253327 AGAGATTTCCACTTCCCGGC 59.747 55.000 0.00 0.00 0.00 6.13
2832 4357 1.834263 AGAGAGATTTCCACTTCCCGG 59.166 52.381 0.00 0.00 0.00 5.73
2833 4358 2.497675 TGAGAGAGATTTCCACTTCCCG 59.502 50.000 0.00 0.00 0.00 5.14
2834 4359 4.769345 ATGAGAGAGATTTCCACTTCCC 57.231 45.455 0.00 0.00 0.00 3.97
2835 4360 8.567285 TTAAAATGAGAGAGATTTCCACTTCC 57.433 34.615 0.00 0.00 0.00 3.46
2836 4361 8.672815 CCTTAAAATGAGAGAGATTTCCACTTC 58.327 37.037 0.00 0.00 0.00 3.01
2837 4362 7.121907 GCCTTAAAATGAGAGAGATTTCCACTT 59.878 37.037 0.00 0.00 0.00 3.16
2838 4363 6.601217 GCCTTAAAATGAGAGAGATTTCCACT 59.399 38.462 0.00 0.00 0.00 4.00
2839 4364 6.183360 GGCCTTAAAATGAGAGAGATTTCCAC 60.183 42.308 0.00 0.00 0.00 4.02
2840 4365 5.888161 GGCCTTAAAATGAGAGAGATTTCCA 59.112 40.000 0.00 0.00 0.00 3.53
2841 4366 5.300539 GGGCCTTAAAATGAGAGAGATTTCC 59.699 44.000 0.84 0.00 0.00 3.13
2842 4367 5.008118 CGGGCCTTAAAATGAGAGAGATTTC 59.992 44.000 0.84 0.00 0.00 2.17
2843 4368 4.884164 CGGGCCTTAAAATGAGAGAGATTT 59.116 41.667 0.84 0.00 0.00 2.17
2844 4369 4.164221 TCGGGCCTTAAAATGAGAGAGATT 59.836 41.667 0.84 0.00 0.00 2.40
2845 4370 3.711704 TCGGGCCTTAAAATGAGAGAGAT 59.288 43.478 0.84 0.00 0.00 2.75
2846 4371 3.104512 TCGGGCCTTAAAATGAGAGAGA 58.895 45.455 0.84 0.00 0.00 3.10
2847 4372 3.118592 AGTCGGGCCTTAAAATGAGAGAG 60.119 47.826 0.84 0.00 0.00 3.20
2848 4373 2.838202 AGTCGGGCCTTAAAATGAGAGA 59.162 45.455 0.84 0.00 0.00 3.10
2849 4374 3.198872 GAGTCGGGCCTTAAAATGAGAG 58.801 50.000 0.84 0.00 0.00 3.20
2850 4375 2.093128 GGAGTCGGGCCTTAAAATGAGA 60.093 50.000 0.84 0.00 0.00 3.27
2851 4376 2.289565 GGAGTCGGGCCTTAAAATGAG 58.710 52.381 0.84 0.00 0.00 2.90
2852 4377 1.064979 GGGAGTCGGGCCTTAAAATGA 60.065 52.381 0.84 0.00 0.00 2.57
2853 4378 1.389555 GGGAGTCGGGCCTTAAAATG 58.610 55.000 0.84 0.00 0.00 2.32
2854 4379 0.107361 CGGGAGTCGGGCCTTAAAAT 60.107 55.000 0.84 0.00 34.75 1.82
2855 4380 1.297364 CGGGAGTCGGGCCTTAAAA 59.703 57.895 0.84 0.00 34.75 1.52
2856 4381 1.914764 ACGGGAGTCGGGCCTTAAA 60.915 57.895 0.84 0.00 40.62 1.52
2857 4382 2.284112 ACGGGAGTCGGGCCTTAA 60.284 61.111 0.84 0.00 40.62 1.85
2858 4383 3.072468 CACGGGAGTCGGGCCTTA 61.072 66.667 0.84 0.00 44.67 2.69
2864 4389 1.676635 TAGGTGACACGGGAGTCGG 60.677 63.158 0.00 0.00 44.67 4.79
2865 4390 1.505353 GTAGGTGACACGGGAGTCG 59.495 63.158 0.00 0.00 44.67 4.18
2866 4391 1.602327 GGGTAGGTGACACGGGAGTC 61.602 65.000 0.00 0.00 44.67 3.36
2868 4393 3.295800 GGGTAGGTGACACGGGAG 58.704 66.667 0.00 0.00 0.00 4.30
2873 4398 1.080025 GCTCACGGGTAGGTGACAC 60.080 63.158 0.00 0.00 41.76 3.67
2874 4399 2.632544 CGCTCACGGGTAGGTGACA 61.633 63.158 0.00 0.00 41.76 3.58
2875 4400 2.181021 CGCTCACGGGTAGGTGAC 59.819 66.667 0.00 0.00 41.76 3.67
2876 4401 2.034532 TCGCTCACGGGTAGGTGA 59.965 61.111 0.00 0.00 44.25 4.02
2877 4402 2.181021 GTCGCTCACGGGTAGGTG 59.819 66.667 0.00 0.00 40.63 4.00
2878 4403 3.066814 GGTCGCTCACGGGTAGGT 61.067 66.667 0.00 0.00 40.63 3.08
2879 4404 3.834799 GGGTCGCTCACGGGTAGG 61.835 72.222 0.00 0.00 40.63 3.18
2880 4405 4.189188 CGGGTCGCTCACGGGTAG 62.189 72.222 0.00 0.00 39.57 3.18
2881 4406 4.720902 TCGGGTCGCTCACGGGTA 62.721 66.667 2.68 0.00 43.95 3.69
2884 4409 4.180946 CTCTCGGGTCGCTCACGG 62.181 72.222 2.68 0.00 43.95 4.94
2885 4410 3.125573 TCTCTCGGGTCGCTCACG 61.126 66.667 0.00 0.00 45.33 4.35
2886 4411 2.333417 TGTCTCTCGGGTCGCTCAC 61.333 63.158 0.00 0.00 0.00 3.51
2887 4412 2.033602 TGTCTCTCGGGTCGCTCA 59.966 61.111 0.00 0.00 0.00 4.26
2888 4413 1.984321 GAGTGTCTCTCGGGTCGCTC 61.984 65.000 3.71 3.71 33.25 5.03
2889 4414 2.034376 AGTGTCTCTCGGGTCGCT 59.966 61.111 0.00 0.00 0.00 4.93
2890 4415 2.486042 GAGTGTCTCTCGGGTCGC 59.514 66.667 0.00 0.00 33.25 5.19
2891 4416 2.408241 GGGAGTGTCTCTCGGGTCG 61.408 68.421 0.00 0.00 43.60 4.79
2892 4417 3.605895 GGGAGTGTCTCTCGGGTC 58.394 66.667 0.00 0.00 43.60 4.46
2897 4422 4.500116 GCGGCGGGAGTGTCTCTC 62.500 72.222 9.78 0.00 42.07 3.20
2914 4439 3.612247 CTGGAGAACTGGGCGGTGG 62.612 68.421 0.00 0.00 0.00 4.61
2915 4440 1.903877 ATCTGGAGAACTGGGCGGTG 61.904 60.000 0.00 0.00 0.00 4.94
2916 4441 1.613630 ATCTGGAGAACTGGGCGGT 60.614 57.895 0.00 0.00 0.00 5.68
2917 4442 1.144936 GATCTGGAGAACTGGGCGG 59.855 63.158 0.00 0.00 0.00 6.13
2918 4443 1.144936 GGATCTGGAGAACTGGGCG 59.855 63.158 0.00 0.00 0.00 6.13
2919 4444 0.915364 AAGGATCTGGAGAACTGGGC 59.085 55.000 0.00 0.00 0.00 5.36
2920 4445 1.211457 CCAAGGATCTGGAGAACTGGG 59.789 57.143 0.00 0.00 38.96 4.45
2921 4446 1.407989 GCCAAGGATCTGGAGAACTGG 60.408 57.143 5.19 0.00 38.96 4.00
2922 4447 1.558756 AGCCAAGGATCTGGAGAACTG 59.441 52.381 5.19 0.00 38.96 3.16
2923 4448 1.836802 GAGCCAAGGATCTGGAGAACT 59.163 52.381 5.19 0.00 38.96 3.01
2924 4449 1.134250 GGAGCCAAGGATCTGGAGAAC 60.134 57.143 5.19 0.00 38.96 3.01
2925 4450 1.207791 GGAGCCAAGGATCTGGAGAA 58.792 55.000 5.19 0.00 38.96 2.87
2926 4451 0.692419 GGGAGCCAAGGATCTGGAGA 60.692 60.000 5.19 0.00 38.96 3.71
2927 4452 0.693767 AGGGAGCCAAGGATCTGGAG 60.694 60.000 5.19 0.00 38.96 3.86
2928 4453 0.692419 GAGGGAGCCAAGGATCTGGA 60.692 60.000 5.19 0.00 38.96 3.86
2929 4454 1.835693 GAGGGAGCCAAGGATCTGG 59.164 63.158 4.18 0.00 39.71 3.86
2930 4455 1.445095 CGAGGGAGCCAAGGATCTG 59.555 63.158 4.18 0.00 0.00 2.90
2931 4456 2.439104 GCGAGGGAGCCAAGGATCT 61.439 63.158 4.18 0.00 0.00 2.75
2932 4457 2.110006 GCGAGGGAGCCAAGGATC 59.890 66.667 0.00 0.00 0.00 3.36
2988 4513 1.750682 GCCCTACTACCTTTGGCATGG 60.751 57.143 5.63 5.63 41.76 3.66
2990 4515 1.212935 CAGCCCTACTACCTTTGGCAT 59.787 52.381 0.00 0.00 44.60 4.40
2991 4516 0.618458 CAGCCCTACTACCTTTGGCA 59.382 55.000 0.00 0.00 44.60 4.92
3003 4528 0.605319 CAACGCTTGAACCAGCCCTA 60.605 55.000 0.00 0.00 36.31 3.53
3005 4530 2.644992 CAACGCTTGAACCAGCCC 59.355 61.111 0.00 0.00 36.31 5.19
3008 4533 0.738389 AACACCAACGCTTGAACCAG 59.262 50.000 0.15 0.00 0.00 4.00
3015 4540 1.745232 TCAACAGAACACCAACGCTT 58.255 45.000 0.00 0.00 0.00 4.68
3018 4543 3.559655 TCTTCATCAACAGAACACCAACG 59.440 43.478 0.00 0.00 0.00 4.10
3082 4607 3.597675 TATGGCTGCCGTTGCACGA 62.598 57.895 20.08 0.00 46.05 4.35
3101 4626 2.877975 CCAGGATGTGGCCAGAAAG 58.122 57.895 5.11 0.00 40.39 2.62
3136 4661 1.302033 CACAAGGACGAGCCAGCTT 60.302 57.895 0.00 0.00 40.02 3.74
3201 4728 2.275418 GGAACATGGCATCCCCGT 59.725 61.111 0.00 0.00 35.87 5.28
3215 4742 1.036707 CCTTTGCAGGAAAACGGGAA 58.963 50.000 0.00 0.00 44.19 3.97
3241 4768 3.680920 ATCTCCGGCCTCCTCGGTT 62.681 63.158 0.00 0.00 46.82 4.44
3242 4769 4.144727 ATCTCCGGCCTCCTCGGT 62.145 66.667 0.00 0.00 46.82 4.69
3322 4849 2.110213 GACGTGTGCCCAAGACCA 59.890 61.111 0.00 0.00 0.00 4.02
3349 4876 0.687354 AGTGGTACCTGGAACTGCTG 59.313 55.000 14.36 0.00 0.00 4.41
3519 6337 5.358090 ACTATCACTCTGCATCAAGTCATG 58.642 41.667 0.00 0.00 0.00 3.07
3536 6354 0.673333 CCGCCACTGCACAACTATCA 60.673 55.000 0.00 0.00 37.32 2.15
3540 6358 2.680974 ATCACCGCCACTGCACAACT 62.681 55.000 0.00 0.00 37.32 3.16
3547 6365 0.378257 GCAATGTATCACCGCCACTG 59.622 55.000 0.00 0.00 0.00 3.66
3583 6401 3.283684 CGCCACCGCTTTTCCACA 61.284 61.111 0.00 0.00 0.00 4.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.