Multiple sequence alignment - TraesCS7B01G447700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G447700 chr7B 100.000 4122 0 0 1 4122 710731692 710727571 0.000000e+00 7613
1 TraesCS7B01G447700 chr7B 88.755 1414 136 17 1602 2996 710433722 710432313 0.000000e+00 1709
2 TraesCS7B01G447700 chr7B 94.362 674 36 2 2844 3516 710346768 710346096 0.000000e+00 1033
3 TraesCS7B01G447700 chr7B 94.563 607 29 1 3520 4122 423678252 423677646 0.000000e+00 935
4 TraesCS7B01G447700 chr7B 94.127 613 30 5 3510 4120 121111909 121112517 0.000000e+00 928
5 TraesCS7B01G447700 chr7B 82.000 1050 159 19 1602 2627 709850469 709849426 0.000000e+00 865
6 TraesCS7B01G447700 chr7B 81.846 964 138 21 523 1478 709851675 709850741 0.000000e+00 776
7 TraesCS7B01G447700 chr7B 80.485 1030 177 10 1602 2610 709750727 709749701 0.000000e+00 767
8 TraesCS7B01G447700 chr7B 81.384 983 142 19 495 1463 710021120 710020165 0.000000e+00 763
9 TraesCS7B01G447700 chr7B 79.631 1085 166 31 2195 3251 710506805 710505748 0.000000e+00 728
10 TraesCS7B01G447700 chr7B 79.565 1057 184 23 1602 2639 710468919 710467876 0.000000e+00 726
11 TraesCS7B01G447700 chr7B 81.524 866 138 14 1806 2652 710462508 710461646 0.000000e+00 693
12 TraesCS7B01G447700 chr7B 87.241 580 66 3 896 1473 709887392 709886819 0.000000e+00 654
13 TraesCS7B01G447700 chr7B 79.841 878 161 9 1769 2639 709757017 709756149 9.730000e-176 627
14 TraesCS7B01G447700 chr7B 80.376 851 139 20 1822 2652 710253125 710252283 4.530000e-174 621
15 TraesCS7B01G447700 chr7B 86.496 548 66 3 917 1463 710487051 710486511 2.740000e-166 595
16 TraesCS7B01G447700 chr7B 84.020 607 85 4 1597 2191 710537287 710536681 1.290000e-159 573
17 TraesCS7B01G447700 chr7B 84.020 607 85 4 1597 2191 710593332 710592726 1.290000e-159 573
18 TraesCS7B01G447700 chr7B 85.795 528 69 4 949 1476 710254017 710253496 4.660000e-154 555
19 TraesCS7B01G447700 chr7B 75.644 854 179 20 1817 2651 710423037 710422194 8.300000e-107 398
20 TraesCS7B01G447700 chr7B 79.494 356 66 7 2844 3197 710018844 710018494 3.180000e-61 246
21 TraesCS7B01G447700 chr7B 76.974 456 78 15 2844 3279 709885435 709884987 6.890000e-58 235
22 TraesCS7B01G447700 chr7B 77.106 463 69 24 2844 3277 709755926 709755472 2.480000e-57 233
23 TraesCS7B01G447700 chr7B 78.409 352 66 9 2844 3192 710467740 710467396 1.930000e-53 220
24 TraesCS7B01G447700 chr7B 80.952 126 23 1 1602 1726 710544978 710544853 9.430000e-17 99
25 TraesCS7B01G447700 chr7B 80.952 126 23 1 1602 1726 710600434 710600309 9.430000e-17 99
26 TraesCS7B01G447700 chr7B 80.952 126 23 1 1602 1726 710608007 710607882 9.430000e-17 99
27 TraesCS7B01G447700 chr6B 94.693 603 32 0 3520 4122 640695021 640694419 0.000000e+00 937
28 TraesCS7B01G447700 chr7A 82.473 1027 152 13 1608 2611 709551149 709550128 0.000000e+00 874
29 TraesCS7B01G447700 chr7A 87.627 590 71 2 890 1478 709551979 709551391 0.000000e+00 684
30 TraesCS7B01G447700 chr7A 77.536 414 74 16 2843 3251 709549860 709549461 8.910000e-57 231
31 TraesCS7B01G447700 chr1D 91.311 610 46 4 3514 4122 379151997 379151394 0.000000e+00 826
32 TraesCS7B01G447700 chr5D 90.686 612 49 5 3512 4122 543429289 543428685 0.000000e+00 808
33 TraesCS7B01G447700 chr6D 90.805 609 45 7 3515 4122 68725074 68725672 0.000000e+00 804
34 TraesCS7B01G447700 chr6D 90.476 609 50 5 3515 4122 78765098 78765699 0.000000e+00 797
35 TraesCS7B01G447700 chr7D 90.523 612 50 5 3512 4122 618056960 618057564 0.000000e+00 802
36 TraesCS7B01G447700 chr7D 81.526 996 137 24 495 1474 616564212 616563248 0.000000e+00 776
37 TraesCS7B01G447700 chr7D 83.715 829 106 14 679 1478 616606504 616605676 0.000000e+00 756
38 TraesCS7B01G447700 chr7D 83.620 757 110 9 1878 2627 616557690 616556941 0.000000e+00 699
39 TraesCS7B01G447700 chr7D 81.439 862 142 12 1806 2652 616605368 616604510 0.000000e+00 689
40 TraesCS7B01G447700 chr7D 81.818 836 116 25 1792 2611 616767939 616767124 0.000000e+00 669
41 TraesCS7B01G447700 chr7D 87.590 556 56 7 913 1464 616768875 616768329 2.090000e-177 632
42 TraesCS7B01G447700 chr7D 86.111 180 25 0 2844 3023 616766888 616766709 1.170000e-45 195
43 TraesCS7B01G447700 chr7D 82.787 122 21 0 1602 1723 616562990 616562869 4.360000e-20 110
44 TraesCS7B01G447700 chr2D 90.476 609 50 7 3515 4122 526120178 526120779 0.000000e+00 797


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G447700 chr7B 710727571 710731692 4121 True 7613.000000 7613 100.000000 1 4122 1 chr7B.!!$R14 4121
1 TraesCS7B01G447700 chr7B 710432313 710433722 1409 True 1709.000000 1709 88.755000 1602 2996 1 chr7B.!!$R5 1394
2 TraesCS7B01G447700 chr7B 710346096 710346768 672 True 1033.000000 1033 94.362000 2844 3516 1 chr7B.!!$R3 672
3 TraesCS7B01G447700 chr7B 423677646 423678252 606 True 935.000000 935 94.563000 3520 4122 1 chr7B.!!$R1 602
4 TraesCS7B01G447700 chr7B 121111909 121112517 608 False 928.000000 928 94.127000 3510 4120 1 chr7B.!!$F1 610
5 TraesCS7B01G447700 chr7B 709849426 709851675 2249 True 820.500000 865 81.923000 523 2627 2 chr7B.!!$R16 2104
6 TraesCS7B01G447700 chr7B 709749701 709750727 1026 True 767.000000 767 80.485000 1602 2610 1 chr7B.!!$R2 1008
7 TraesCS7B01G447700 chr7B 710505748 710506805 1057 True 728.000000 728 79.631000 2195 3251 1 chr7B.!!$R8 1056
8 TraesCS7B01G447700 chr7B 710461646 710462508 862 True 693.000000 693 81.524000 1806 2652 1 chr7B.!!$R6 846
9 TraesCS7B01G447700 chr7B 710486511 710487051 540 True 595.000000 595 86.496000 917 1463 1 chr7B.!!$R7 546
10 TraesCS7B01G447700 chr7B 710252283 710254017 1734 True 588.000000 621 83.085500 949 2652 2 chr7B.!!$R19 1703
11 TraesCS7B01G447700 chr7B 710536681 710537287 606 True 573.000000 573 84.020000 1597 2191 1 chr7B.!!$R9 594
12 TraesCS7B01G447700 chr7B 710592726 710593332 606 True 573.000000 573 84.020000 1597 2191 1 chr7B.!!$R11 594
13 TraesCS7B01G447700 chr7B 710018494 710021120 2626 True 504.500000 763 80.439000 495 3197 2 chr7B.!!$R18 2702
14 TraesCS7B01G447700 chr7B 710467396 710468919 1523 True 473.000000 726 78.987000 1602 3192 2 chr7B.!!$R20 1590
15 TraesCS7B01G447700 chr7B 709884987 709887392 2405 True 444.500000 654 82.107500 896 3279 2 chr7B.!!$R17 2383
16 TraesCS7B01G447700 chr7B 709755472 709757017 1545 True 430.000000 627 78.473500 1769 3277 2 chr7B.!!$R15 1508
17 TraesCS7B01G447700 chr7B 710422194 710423037 843 True 398.000000 398 75.644000 1817 2651 1 chr7B.!!$R4 834
18 TraesCS7B01G447700 chr6B 640694419 640695021 602 True 937.000000 937 94.693000 3520 4122 1 chr6B.!!$R1 602
19 TraesCS7B01G447700 chr7A 709549461 709551979 2518 True 596.333333 874 82.545333 890 3251 3 chr7A.!!$R1 2361
20 TraesCS7B01G447700 chr1D 379151394 379151997 603 True 826.000000 826 91.311000 3514 4122 1 chr1D.!!$R1 608
21 TraesCS7B01G447700 chr5D 543428685 543429289 604 True 808.000000 808 90.686000 3512 4122 1 chr5D.!!$R1 610
22 TraesCS7B01G447700 chr6D 68725074 68725672 598 False 804.000000 804 90.805000 3515 4122 1 chr6D.!!$F1 607
23 TraesCS7B01G447700 chr6D 78765098 78765699 601 False 797.000000 797 90.476000 3515 4122 1 chr6D.!!$F2 607
24 TraesCS7B01G447700 chr7D 618056960 618057564 604 False 802.000000 802 90.523000 3512 4122 1 chr7D.!!$F1 610
25 TraesCS7B01G447700 chr7D 616604510 616606504 1994 True 722.500000 756 82.577000 679 2652 2 chr7D.!!$R3 1973
26 TraesCS7B01G447700 chr7D 616556941 616557690 749 True 699.000000 699 83.620000 1878 2627 1 chr7D.!!$R1 749
27 TraesCS7B01G447700 chr7D 616766709 616768875 2166 True 498.666667 669 85.173000 913 3023 3 chr7D.!!$R4 2110
28 TraesCS7B01G447700 chr7D 616562869 616564212 1343 True 443.000000 776 82.156500 495 1723 2 chr7D.!!$R2 1228
29 TraesCS7B01G447700 chr2D 526120178 526120779 601 False 797.000000 797 90.476000 3515 4122 1 chr2D.!!$F1 607

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
378 379 0.096628 CGAGCAGCTTGATTGAGCAC 59.903 55.0 3.08 0.0 45.12 4.40 F
1428 1491 0.179145 CGCCGGATTCGTCAAGTACT 60.179 55.0 5.05 0.0 33.95 2.73 F
1594 1972 0.172578 GGGTCCGCAAAATACCTTGC 59.827 55.0 0.00 0.0 46.70 4.01 F
2747 3234 0.693049 AAGGGGTCTTCGTGAGCAAT 59.307 50.0 11.08 0.0 44.40 3.56 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1575 1953 0.172578 GCAAGGTATTTTGCGGACCC 59.827 55.0 0.00 0.0 43.36 4.46 R
2494 2945 0.037326 TGACGTCAGGGTGATTGAGC 60.037 55.0 15.76 0.0 0.00 4.26 R
3038 3594 1.595993 GCACTAGCCTCGACAGTCCA 61.596 60.0 0.00 0.0 33.58 4.02 R
3923 4508 0.537188 ATGGACGCTCTGGACGATTT 59.463 50.0 0.00 0.0 0.00 2.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 3.729526 AACTTGATCGTCATTCTTGCG 57.270 42.857 0.00 0.00 0.00 4.85
26 27 2.688507 ACTTGATCGTCATTCTTGCGT 58.311 42.857 0.00 0.00 0.00 5.24
27 28 2.413112 ACTTGATCGTCATTCTTGCGTG 59.587 45.455 0.00 0.00 0.00 5.34
28 29 0.721154 TGATCGTCATTCTTGCGTGC 59.279 50.000 0.00 0.00 0.00 5.34
29 30 1.002366 GATCGTCATTCTTGCGTGCT 58.998 50.000 0.00 0.00 0.00 4.40
30 31 1.394917 GATCGTCATTCTTGCGTGCTT 59.605 47.619 0.00 0.00 0.00 3.91
31 32 0.512518 TCGTCATTCTTGCGTGCTTG 59.487 50.000 0.00 0.00 0.00 4.01
32 33 0.235665 CGTCATTCTTGCGTGCTTGT 59.764 50.000 0.00 0.00 0.00 3.16
33 34 1.334059 CGTCATTCTTGCGTGCTTGTT 60.334 47.619 0.00 0.00 0.00 2.83
34 35 2.310577 GTCATTCTTGCGTGCTTGTTC 58.689 47.619 0.00 0.00 0.00 3.18
35 36 1.266718 TCATTCTTGCGTGCTTGTTCC 59.733 47.619 0.00 0.00 0.00 3.62
36 37 0.598065 ATTCTTGCGTGCTTGTTCCC 59.402 50.000 0.00 0.00 0.00 3.97
37 38 0.749818 TTCTTGCGTGCTTGTTCCCA 60.750 50.000 0.00 0.00 0.00 4.37
38 39 1.165907 TCTTGCGTGCTTGTTCCCAG 61.166 55.000 0.00 0.00 0.00 4.45
39 40 1.447317 CTTGCGTGCTTGTTCCCAGT 61.447 55.000 0.00 0.00 0.00 4.00
40 41 1.034838 TTGCGTGCTTGTTCCCAGTT 61.035 50.000 0.00 0.00 0.00 3.16
41 42 0.179043 TGCGTGCTTGTTCCCAGTTA 60.179 50.000 0.00 0.00 0.00 2.24
42 43 0.517316 GCGTGCTTGTTCCCAGTTAG 59.483 55.000 0.00 0.00 0.00 2.34
43 44 0.517316 CGTGCTTGTTCCCAGTTAGC 59.483 55.000 0.00 0.00 0.00 3.09
44 45 1.878102 CGTGCTTGTTCCCAGTTAGCT 60.878 52.381 0.00 0.00 33.15 3.32
45 46 1.537202 GTGCTTGTTCCCAGTTAGCTG 59.463 52.381 0.00 0.00 42.22 4.24
46 47 0.523519 GCTTGTTCCCAGTTAGCTGC 59.476 55.000 0.17 0.00 41.26 5.25
47 48 1.884067 GCTTGTTCCCAGTTAGCTGCT 60.884 52.381 7.57 7.57 41.26 4.24
48 49 2.615493 GCTTGTTCCCAGTTAGCTGCTA 60.615 50.000 5.02 5.02 41.26 3.49
49 50 3.878778 CTTGTTCCCAGTTAGCTGCTAT 58.121 45.455 10.64 0.00 41.26 2.97
50 51 4.683400 GCTTGTTCCCAGTTAGCTGCTATA 60.683 45.833 10.64 0.00 41.26 1.31
51 52 5.615289 CTTGTTCCCAGTTAGCTGCTATAT 58.385 41.667 10.64 0.00 41.26 0.86
52 53 6.740944 TTGTTCCCAGTTAGCTGCTATATA 57.259 37.500 10.64 0.00 41.26 0.86
53 54 6.935240 TGTTCCCAGTTAGCTGCTATATAT 57.065 37.500 10.64 0.00 41.26 0.86
54 55 8.430573 TTGTTCCCAGTTAGCTGCTATATATA 57.569 34.615 10.64 0.00 41.26 0.86
55 56 7.837863 TGTTCCCAGTTAGCTGCTATATATAC 58.162 38.462 10.64 5.30 41.26 1.47
56 57 7.453439 TGTTCCCAGTTAGCTGCTATATATACA 59.547 37.037 10.64 6.79 41.26 2.29
57 58 8.478877 GTTCCCAGTTAGCTGCTATATATACAT 58.521 37.037 10.64 0.00 41.26 2.29
58 59 8.609617 TCCCAGTTAGCTGCTATATATACATT 57.390 34.615 10.64 0.00 41.26 2.71
59 60 8.696374 TCCCAGTTAGCTGCTATATATACATTC 58.304 37.037 10.64 0.00 41.26 2.67
60 61 7.928706 CCCAGTTAGCTGCTATATATACATTCC 59.071 40.741 10.64 0.00 41.26 3.01
61 62 7.928706 CCAGTTAGCTGCTATATATACATTCCC 59.071 40.741 10.64 0.00 41.26 3.97
62 63 8.700051 CAGTTAGCTGCTATATATACATTCCCT 58.300 37.037 10.64 0.00 35.77 4.20
63 64 9.273137 AGTTAGCTGCTATATATACATTCCCTT 57.727 33.333 10.64 0.00 0.00 3.95
66 67 8.846423 AGCTGCTATATATACATTCCCTTACT 57.154 34.615 0.00 0.00 0.00 2.24
67 68 9.273137 AGCTGCTATATATACATTCCCTTACTT 57.727 33.333 0.00 0.00 0.00 2.24
68 69 9.892130 GCTGCTATATATACATTCCCTTACTTT 57.108 33.333 0.00 0.00 0.00 2.66
77 78 8.851541 ATACATTCCCTTACTTTTGTTCGTAA 57.148 30.769 0.00 0.00 0.00 3.18
78 79 6.962686 ACATTCCCTTACTTTTGTTCGTAAC 58.037 36.000 0.00 0.00 0.00 2.50
79 80 6.016860 ACATTCCCTTACTTTTGTTCGTAACC 60.017 38.462 0.00 0.00 0.00 2.85
80 81 5.033589 TCCCTTACTTTTGTTCGTAACCA 57.966 39.130 0.00 0.00 0.00 3.67
81 82 5.623169 TCCCTTACTTTTGTTCGTAACCAT 58.377 37.500 0.00 0.00 0.00 3.55
82 83 5.470777 TCCCTTACTTTTGTTCGTAACCATG 59.529 40.000 0.00 0.00 0.00 3.66
83 84 5.239963 CCCTTACTTTTGTTCGTAACCATGT 59.760 40.000 0.00 0.00 0.00 3.21
84 85 6.368213 CCTTACTTTTGTTCGTAACCATGTC 58.632 40.000 0.00 0.00 0.00 3.06
85 86 6.204108 CCTTACTTTTGTTCGTAACCATGTCT 59.796 38.462 0.00 0.00 0.00 3.41
86 87 7.385752 CCTTACTTTTGTTCGTAACCATGTCTA 59.614 37.037 0.00 0.00 0.00 2.59
87 88 6.780706 ACTTTTGTTCGTAACCATGTCTAG 57.219 37.500 0.00 0.00 0.00 2.43
88 89 6.285990 ACTTTTGTTCGTAACCATGTCTAGT 58.714 36.000 0.00 0.00 0.00 2.57
89 90 6.764560 ACTTTTGTTCGTAACCATGTCTAGTT 59.235 34.615 0.00 0.00 0.00 2.24
90 91 6.774354 TTTGTTCGTAACCATGTCTAGTTC 57.226 37.500 0.00 0.00 0.00 3.01
91 92 4.478699 TGTTCGTAACCATGTCTAGTTCG 58.521 43.478 0.00 0.00 0.00 3.95
92 93 4.022935 TGTTCGTAACCATGTCTAGTTCGT 60.023 41.667 0.00 0.00 0.00 3.85
93 94 4.771590 TCGTAACCATGTCTAGTTCGTT 57.228 40.909 0.00 0.00 0.00 3.85
94 95 4.478699 TCGTAACCATGTCTAGTTCGTTG 58.521 43.478 0.00 0.00 0.00 4.10
95 96 4.216042 TCGTAACCATGTCTAGTTCGTTGA 59.784 41.667 0.00 0.00 0.00 3.18
96 97 4.919168 CGTAACCATGTCTAGTTCGTTGAA 59.081 41.667 0.00 0.00 0.00 2.69
97 98 5.403166 CGTAACCATGTCTAGTTCGTTGAAA 59.597 40.000 0.00 0.00 0.00 2.69
98 99 6.074195 CGTAACCATGTCTAGTTCGTTGAAAA 60.074 38.462 0.00 0.00 0.00 2.29
99 100 5.924475 ACCATGTCTAGTTCGTTGAAAAG 57.076 39.130 0.00 0.00 0.00 2.27
100 101 5.365619 ACCATGTCTAGTTCGTTGAAAAGT 58.634 37.500 0.00 0.00 0.00 2.66
101 102 5.236478 ACCATGTCTAGTTCGTTGAAAAGTG 59.764 40.000 0.00 0.00 0.00 3.16
102 103 5.236478 CCATGTCTAGTTCGTTGAAAAGTGT 59.764 40.000 0.00 0.00 0.00 3.55
103 104 6.238374 CCATGTCTAGTTCGTTGAAAAGTGTT 60.238 38.462 0.00 0.00 0.00 3.32
104 105 6.102006 TGTCTAGTTCGTTGAAAAGTGTTG 57.898 37.500 0.00 0.00 0.00 3.33
105 106 5.870433 TGTCTAGTTCGTTGAAAAGTGTTGA 59.130 36.000 0.00 0.00 0.00 3.18
106 107 6.369340 TGTCTAGTTCGTTGAAAAGTGTTGAA 59.631 34.615 0.00 0.00 0.00 2.69
107 108 6.681599 GTCTAGTTCGTTGAAAAGTGTTGAAC 59.318 38.462 0.00 0.00 35.64 3.18
108 109 5.365403 AGTTCGTTGAAAAGTGTTGAACA 57.635 34.783 0.00 0.00 37.34 3.18
109 110 5.764131 AGTTCGTTGAAAAGTGTTGAACAA 58.236 33.333 0.00 0.00 37.34 2.83
110 111 5.856455 AGTTCGTTGAAAAGTGTTGAACAAG 59.144 36.000 0.00 0.00 37.34 3.16
111 112 5.614923 TCGTTGAAAAGTGTTGAACAAGA 57.385 34.783 0.00 0.00 0.00 3.02
112 113 5.627172 TCGTTGAAAAGTGTTGAACAAGAG 58.373 37.500 0.00 0.00 0.00 2.85
113 114 4.262976 CGTTGAAAAGTGTTGAACAAGAGC 59.737 41.667 0.00 0.00 0.00 4.09
114 115 5.160641 GTTGAAAAGTGTTGAACAAGAGCA 58.839 37.500 0.00 0.00 0.00 4.26
115 116 5.581126 TGAAAAGTGTTGAACAAGAGCAT 57.419 34.783 0.00 0.00 0.00 3.79
116 117 5.581605 TGAAAAGTGTTGAACAAGAGCATC 58.418 37.500 0.00 0.00 0.00 3.91
117 118 4.574599 AAAGTGTTGAACAAGAGCATCC 57.425 40.909 0.00 0.00 33.66 3.51
118 119 3.213206 AGTGTTGAACAAGAGCATCCA 57.787 42.857 0.00 0.00 33.66 3.41
119 120 3.759581 AGTGTTGAACAAGAGCATCCAT 58.240 40.909 0.00 0.00 33.66 3.41
120 121 3.504906 AGTGTTGAACAAGAGCATCCATG 59.495 43.478 0.00 0.00 33.66 3.66
135 136 4.866921 CATCCATGCTTACATTGTCCATG 58.133 43.478 13.70 13.70 39.07 3.66
136 137 2.689471 TCCATGCTTACATTGTCCATGC 59.311 45.455 14.60 5.45 36.14 4.06
137 138 2.427812 CCATGCTTACATTGTCCATGCA 59.572 45.455 14.60 9.68 36.14 3.96
138 139 3.069016 CCATGCTTACATTGTCCATGCAT 59.931 43.478 14.60 11.06 39.79 3.96
139 140 4.278919 CCATGCTTACATTGTCCATGCATA 59.721 41.667 0.00 0.00 37.54 3.14
140 141 5.047590 CCATGCTTACATTGTCCATGCATAT 60.048 40.000 0.00 0.00 37.54 1.78
141 142 6.452242 CATGCTTACATTGTCCATGCATATT 58.548 36.000 0.00 0.00 37.54 1.28
142 143 6.468333 TGCTTACATTGTCCATGCATATTT 57.532 33.333 0.00 0.00 36.14 1.40
143 144 6.876155 TGCTTACATTGTCCATGCATATTTT 58.124 32.000 0.00 0.00 36.14 1.82
144 145 6.757478 TGCTTACATTGTCCATGCATATTTTG 59.243 34.615 0.00 0.00 36.14 2.44
164 165 6.370433 TTTGCTTTTATTTTTGAACTGGCC 57.630 33.333 0.00 0.00 0.00 5.36
165 166 5.289083 TGCTTTTATTTTTGAACTGGCCT 57.711 34.783 3.32 0.00 0.00 5.19
166 167 5.296748 TGCTTTTATTTTTGAACTGGCCTC 58.703 37.500 3.32 0.00 0.00 4.70
167 168 4.690748 GCTTTTATTTTTGAACTGGCCTCC 59.309 41.667 3.32 0.00 0.00 4.30
168 169 5.511373 GCTTTTATTTTTGAACTGGCCTCCT 60.511 40.000 3.32 0.00 0.00 3.69
169 170 5.722021 TTTATTTTTGAACTGGCCTCCTC 57.278 39.130 3.32 0.00 0.00 3.71
170 171 3.532641 ATTTTTGAACTGGCCTCCTCT 57.467 42.857 3.32 0.00 0.00 3.69
171 172 3.312736 TTTTTGAACTGGCCTCCTCTT 57.687 42.857 3.32 0.00 0.00 2.85
172 173 2.276732 TTTGAACTGGCCTCCTCTTG 57.723 50.000 3.32 0.00 0.00 3.02
173 174 1.434188 TTGAACTGGCCTCCTCTTGA 58.566 50.000 3.32 0.00 0.00 3.02
174 175 1.661463 TGAACTGGCCTCCTCTTGAT 58.339 50.000 3.32 0.00 0.00 2.57
175 176 1.988107 TGAACTGGCCTCCTCTTGATT 59.012 47.619 3.32 0.00 0.00 2.57
176 177 2.290514 TGAACTGGCCTCCTCTTGATTG 60.291 50.000 3.32 0.00 0.00 2.67
177 178 1.366319 ACTGGCCTCCTCTTGATTGT 58.634 50.000 3.32 0.00 0.00 2.71
178 179 1.707427 ACTGGCCTCCTCTTGATTGTT 59.293 47.619 3.32 0.00 0.00 2.83
179 180 2.108952 ACTGGCCTCCTCTTGATTGTTT 59.891 45.455 3.32 0.00 0.00 2.83
180 181 2.490903 CTGGCCTCCTCTTGATTGTTTG 59.509 50.000 3.32 0.00 0.00 2.93
181 182 2.158475 TGGCCTCCTCTTGATTGTTTGT 60.158 45.455 3.32 0.00 0.00 2.83
182 183 2.489722 GGCCTCCTCTTGATTGTTTGTC 59.510 50.000 0.00 0.00 0.00 3.18
183 184 3.149196 GCCTCCTCTTGATTGTTTGTCA 58.851 45.455 0.00 0.00 0.00 3.58
184 185 3.057946 GCCTCCTCTTGATTGTTTGTCAC 60.058 47.826 0.00 0.00 0.00 3.67
185 186 4.136796 CCTCCTCTTGATTGTTTGTCACA 58.863 43.478 0.00 0.00 0.00 3.58
186 187 4.023707 CCTCCTCTTGATTGTTTGTCACAC 60.024 45.833 0.00 0.00 33.98 3.82
187 188 4.780815 TCCTCTTGATTGTTTGTCACACT 58.219 39.130 0.00 0.00 33.98 3.55
188 189 4.816385 TCCTCTTGATTGTTTGTCACACTC 59.184 41.667 0.00 0.00 35.95 3.51
189 190 4.023707 CCTCTTGATTGTTTGTCACACTCC 60.024 45.833 0.00 0.00 34.77 3.85
190 191 3.559655 TCTTGATTGTTTGTCACACTCCG 59.440 43.478 0.00 0.00 34.77 4.63
191 192 2.912771 TGATTGTTTGTCACACTCCGT 58.087 42.857 0.00 0.00 34.77 4.69
192 193 2.869801 TGATTGTTTGTCACACTCCGTC 59.130 45.455 0.00 0.00 34.77 4.79
193 194 2.388310 TTGTTTGTCACACTCCGTCA 57.612 45.000 0.00 0.00 33.98 4.35
194 195 1.647346 TGTTTGTCACACTCCGTCAC 58.353 50.000 0.00 0.00 0.00 3.67
195 196 1.206132 TGTTTGTCACACTCCGTCACT 59.794 47.619 0.00 0.00 0.00 3.41
196 197 1.593006 GTTTGTCACACTCCGTCACTG 59.407 52.381 0.00 0.00 0.00 3.66
197 198 1.107945 TTGTCACACTCCGTCACTGA 58.892 50.000 0.00 0.00 0.00 3.41
198 199 1.328279 TGTCACACTCCGTCACTGAT 58.672 50.000 0.00 0.00 0.00 2.90
199 200 1.000274 TGTCACACTCCGTCACTGATG 60.000 52.381 0.00 0.00 0.00 3.07
200 201 1.269723 GTCACACTCCGTCACTGATGA 59.730 52.381 0.00 0.00 0.00 2.92
201 202 1.541588 TCACACTCCGTCACTGATGAG 59.458 52.381 0.00 3.83 34.75 2.90
202 203 0.891373 ACACTCCGTCACTGATGAGG 59.109 55.000 11.28 3.66 39.88 3.86
203 204 0.891373 CACTCCGTCACTGATGAGGT 59.109 55.000 11.28 3.19 38.77 3.85
204 205 0.891373 ACTCCGTCACTGATGAGGTG 59.109 55.000 11.28 6.25 38.77 4.00
205 206 0.459237 CTCCGTCACTGATGAGGTGC 60.459 60.000 0.00 0.00 38.77 5.01
206 207 1.184970 TCCGTCACTGATGAGGTGCA 61.185 55.000 0.00 0.00 38.77 4.57
207 208 0.107993 CCGTCACTGATGAGGTGCAT 60.108 55.000 0.00 0.00 38.77 3.96
208 209 1.136891 CCGTCACTGATGAGGTGCATA 59.863 52.381 0.00 0.00 38.77 3.14
209 210 2.196749 CGTCACTGATGAGGTGCATAC 58.803 52.381 0.00 0.00 37.34 2.39
225 226 7.992180 GGTGCATACCATTAAATGAAGAAAG 57.008 36.000 0.00 0.00 46.71 2.62
226 227 7.771183 GGTGCATACCATTAAATGAAGAAAGA 58.229 34.615 0.00 0.00 46.71 2.52
227 228 7.917505 GGTGCATACCATTAAATGAAGAAAGAG 59.082 37.037 0.00 0.00 46.71 2.85
228 229 8.677300 GTGCATACCATTAAATGAAGAAAGAGA 58.323 33.333 0.00 0.00 0.00 3.10
229 230 9.412460 TGCATACCATTAAATGAAGAAAGAGAT 57.588 29.630 0.00 0.00 0.00 2.75
269 270 8.763049 ATCATATGAAATGATGTACTACCACG 57.237 34.615 9.99 0.00 37.37 4.94
270 271 7.722363 TCATATGAAATGATGTACTACCACGT 58.278 34.615 1.98 0.00 0.00 4.49
271 272 7.651704 TCATATGAAATGATGTACTACCACGTG 59.348 37.037 9.08 9.08 0.00 4.49
272 273 5.142061 TGAAATGATGTACTACCACGTGT 57.858 39.130 15.65 5.35 0.00 4.49
273 274 5.165676 TGAAATGATGTACTACCACGTGTC 58.834 41.667 15.65 3.12 0.00 3.67
274 275 4.794278 AATGATGTACTACCACGTGTCA 57.206 40.909 15.65 9.18 0.00 3.58
275 276 5.339008 AATGATGTACTACCACGTGTCAT 57.661 39.130 15.65 11.14 0.00 3.06
276 277 4.104696 TGATGTACTACCACGTGTCATG 57.895 45.455 15.65 0.92 0.00 3.07
277 278 2.357327 TGTACTACCACGTGTCATGC 57.643 50.000 15.65 1.34 0.00 4.06
278 279 1.614413 TGTACTACCACGTGTCATGCA 59.386 47.619 15.65 4.04 0.00 3.96
279 280 2.232696 TGTACTACCACGTGTCATGCAT 59.767 45.455 15.65 0.00 0.00 3.96
280 281 1.725641 ACTACCACGTGTCATGCATG 58.274 50.000 21.07 21.07 39.90 4.06
281 282 1.275010 ACTACCACGTGTCATGCATGA 59.725 47.619 25.42 25.42 37.53 3.07
293 294 2.815503 TCATGCATGACAACAAGTGAGG 59.184 45.455 25.42 0.00 0.00 3.86
294 295 2.346766 TGCATGACAACAAGTGAGGT 57.653 45.000 0.00 0.00 0.00 3.85
295 296 2.221169 TGCATGACAACAAGTGAGGTC 58.779 47.619 0.00 0.00 0.00 3.85
296 297 2.158769 TGCATGACAACAAGTGAGGTCT 60.159 45.455 0.00 0.00 0.00 3.85
297 298 2.880890 GCATGACAACAAGTGAGGTCTT 59.119 45.455 0.00 0.00 0.00 3.01
298 299 3.058639 GCATGACAACAAGTGAGGTCTTC 60.059 47.826 0.00 0.00 0.00 2.87
299 300 4.384056 CATGACAACAAGTGAGGTCTTCT 58.616 43.478 0.00 0.00 0.00 2.85
300 301 5.541845 CATGACAACAAGTGAGGTCTTCTA 58.458 41.667 0.00 0.00 0.00 2.10
301 302 5.808366 TGACAACAAGTGAGGTCTTCTAT 57.192 39.130 0.00 0.00 0.00 1.98
302 303 5.541845 TGACAACAAGTGAGGTCTTCTATG 58.458 41.667 0.00 0.00 0.00 2.23
303 304 5.304357 TGACAACAAGTGAGGTCTTCTATGA 59.696 40.000 0.00 0.00 0.00 2.15
304 305 6.014242 TGACAACAAGTGAGGTCTTCTATGAT 60.014 38.462 0.00 0.00 0.00 2.45
305 306 7.178451 TGACAACAAGTGAGGTCTTCTATGATA 59.822 37.037 0.00 0.00 0.00 2.15
306 307 7.324178 ACAACAAGTGAGGTCTTCTATGATAC 58.676 38.462 0.00 0.00 0.00 2.24
307 308 6.472686 ACAAGTGAGGTCTTCTATGATACC 57.527 41.667 0.00 0.00 0.00 2.73
308 309 5.958380 ACAAGTGAGGTCTTCTATGATACCA 59.042 40.000 0.00 0.00 34.29 3.25
309 310 6.440647 ACAAGTGAGGTCTTCTATGATACCAA 59.559 38.462 0.00 0.00 34.29 3.67
310 311 6.472686 AGTGAGGTCTTCTATGATACCAAC 57.527 41.667 0.00 0.00 34.29 3.77
311 312 5.364157 AGTGAGGTCTTCTATGATACCAACC 59.636 44.000 0.00 0.00 34.29 3.77
312 313 5.364157 GTGAGGTCTTCTATGATACCAACCT 59.636 44.000 0.00 0.00 38.55 3.50
313 314 6.550108 GTGAGGTCTTCTATGATACCAACCTA 59.450 42.308 0.00 0.00 36.07 3.08
314 315 7.233757 GTGAGGTCTTCTATGATACCAACCTAT 59.766 40.741 0.00 0.00 36.07 2.57
315 316 8.453681 TGAGGTCTTCTATGATACCAACCTATA 58.546 37.037 0.00 0.00 36.07 1.31
316 317 9.482175 GAGGTCTTCTATGATACCAACCTATAT 57.518 37.037 0.00 0.00 36.07 0.86
317 318 9.261035 AGGTCTTCTATGATACCAACCTATATG 57.739 37.037 0.00 0.00 34.22 1.78
318 319 9.256228 GGTCTTCTATGATACCAACCTATATGA 57.744 37.037 0.00 0.00 32.04 2.15
327 328 9.487442 TGATACCAACCTATATGATACTATGCA 57.513 33.333 0.00 0.00 0.00 3.96
359 360 7.435068 AATATATGATACTTTCAACCACCGC 57.565 36.000 0.00 0.00 38.03 5.68
360 361 1.434555 TGATACTTTCAACCACCGCG 58.565 50.000 0.00 0.00 0.00 6.46
361 362 1.001068 TGATACTTTCAACCACCGCGA 59.999 47.619 8.23 0.00 0.00 5.87
362 363 1.659098 GATACTTTCAACCACCGCGAG 59.341 52.381 8.23 0.00 0.00 5.03
363 364 0.947180 TACTTTCAACCACCGCGAGC 60.947 55.000 8.23 0.00 0.00 5.03
364 365 2.203084 TTTCAACCACCGCGAGCA 60.203 55.556 8.23 0.00 0.00 4.26
365 366 2.175184 CTTTCAACCACCGCGAGCAG 62.175 60.000 8.23 0.00 0.00 4.24
368 369 4.626081 AACCACCGCGAGCAGCTT 62.626 61.111 8.23 0.00 45.59 3.74
371 372 2.816958 CACCGCGAGCAGCTTGAT 60.817 61.111 14.52 0.00 45.59 2.57
372 373 2.046892 ACCGCGAGCAGCTTGATT 60.047 55.556 14.52 0.00 45.59 2.57
373 374 2.393768 ACCGCGAGCAGCTTGATTG 61.394 57.895 14.52 3.08 45.59 2.67
374 375 2.102438 CCGCGAGCAGCTTGATTGA 61.102 57.895 14.52 0.00 45.59 2.57
375 376 1.347564 CGCGAGCAGCTTGATTGAG 59.652 57.895 14.52 0.00 45.59 3.02
376 377 1.062206 GCGAGCAGCTTGATTGAGC 59.938 57.895 14.52 0.00 44.04 4.26
377 378 1.642037 GCGAGCAGCTTGATTGAGCA 61.642 55.000 14.52 0.00 45.12 4.26
378 379 0.096628 CGAGCAGCTTGATTGAGCAC 59.903 55.000 3.08 0.00 45.12 4.40
379 380 1.451067 GAGCAGCTTGATTGAGCACT 58.549 50.000 0.00 0.00 45.12 4.40
380 381 2.625737 GAGCAGCTTGATTGAGCACTA 58.374 47.619 0.00 0.00 45.12 2.74
381 382 2.351111 GAGCAGCTTGATTGAGCACTAC 59.649 50.000 0.00 0.00 45.12 2.73
382 383 2.079158 GCAGCTTGATTGAGCACTACA 58.921 47.619 0.00 0.00 45.12 2.74
383 384 2.485426 GCAGCTTGATTGAGCACTACAA 59.515 45.455 0.00 0.00 45.12 2.41
384 385 3.128242 GCAGCTTGATTGAGCACTACAAT 59.872 43.478 0.00 0.00 45.12 2.71
392 393 4.488126 TTGAGCACTACAATCAACTTGC 57.512 40.909 0.00 0.00 38.50 4.01
393 394 3.475575 TGAGCACTACAATCAACTTGCA 58.524 40.909 0.00 0.00 38.50 4.08
394 395 4.074259 TGAGCACTACAATCAACTTGCAT 58.926 39.130 0.00 0.00 38.50 3.96
395 396 4.083164 TGAGCACTACAATCAACTTGCATG 60.083 41.667 0.00 0.00 38.50 4.06
396 397 2.919229 GCACTACAATCAACTTGCATGC 59.081 45.455 11.82 11.82 38.50 4.06
397 398 3.366679 GCACTACAATCAACTTGCATGCT 60.367 43.478 20.33 0.00 38.50 3.79
398 399 4.801891 CACTACAATCAACTTGCATGCTT 58.198 39.130 20.33 1.44 38.50 3.91
399 400 5.224888 CACTACAATCAACTTGCATGCTTT 58.775 37.500 20.33 6.60 38.50 3.51
400 401 6.380995 CACTACAATCAACTTGCATGCTTTA 58.619 36.000 20.33 3.38 38.50 1.85
401 402 6.525628 CACTACAATCAACTTGCATGCTTTAG 59.474 38.462 20.33 15.23 38.50 1.85
402 403 5.710513 ACAATCAACTTGCATGCTTTAGA 57.289 34.783 20.33 10.70 38.50 2.10
403 404 6.088016 ACAATCAACTTGCATGCTTTAGAA 57.912 33.333 20.33 3.02 38.50 2.10
404 405 6.694447 ACAATCAACTTGCATGCTTTAGAAT 58.306 32.000 20.33 3.40 38.50 2.40
405 406 7.829725 ACAATCAACTTGCATGCTTTAGAATA 58.170 30.769 20.33 5.19 38.50 1.75
406 407 8.472413 ACAATCAACTTGCATGCTTTAGAATAT 58.528 29.630 20.33 6.98 38.50 1.28
407 408 8.752254 CAATCAACTTGCATGCTTTAGAATATG 58.248 33.333 20.33 11.81 0.00 1.78
408 409 7.628769 TCAACTTGCATGCTTTAGAATATGA 57.371 32.000 20.33 13.46 0.00 2.15
409 410 8.054152 TCAACTTGCATGCTTTAGAATATGAA 57.946 30.769 20.33 0.00 0.00 2.57
410 411 8.186163 TCAACTTGCATGCTTTAGAATATGAAG 58.814 33.333 20.33 11.39 0.00 3.02
411 412 7.035840 ACTTGCATGCTTTAGAATATGAAGG 57.964 36.000 20.33 0.00 0.00 3.46
412 413 6.830324 ACTTGCATGCTTTAGAATATGAAGGA 59.170 34.615 20.33 0.00 0.00 3.36
413 414 6.624352 TGCATGCTTTAGAATATGAAGGAC 57.376 37.500 20.33 0.00 27.48 3.85
414 415 5.532406 TGCATGCTTTAGAATATGAAGGACC 59.468 40.000 20.33 0.00 27.48 4.46
415 416 5.334414 GCATGCTTTAGAATATGAAGGACCG 60.334 44.000 11.37 0.00 27.48 4.79
416 417 5.607939 TGCTTTAGAATATGAAGGACCGA 57.392 39.130 0.00 0.00 0.00 4.69
417 418 5.601662 TGCTTTAGAATATGAAGGACCGAG 58.398 41.667 0.00 0.00 0.00 4.63
418 419 5.128827 TGCTTTAGAATATGAAGGACCGAGT 59.871 40.000 0.00 0.00 0.00 4.18
419 420 6.322969 TGCTTTAGAATATGAAGGACCGAGTA 59.677 38.462 0.00 0.00 0.00 2.59
420 421 7.147794 TGCTTTAGAATATGAAGGACCGAGTAA 60.148 37.037 0.00 0.00 0.00 2.24
421 422 7.709613 GCTTTAGAATATGAAGGACCGAGTAAA 59.290 37.037 0.00 0.00 0.00 2.01
422 423 9.765795 CTTTAGAATATGAAGGACCGAGTAAAT 57.234 33.333 0.00 0.00 0.00 1.40
425 426 8.480133 AGAATATGAAGGACCGAGTAAATACT 57.520 34.615 0.00 0.00 39.71 2.12
426 427 9.584008 AGAATATGAAGGACCGAGTAAATACTA 57.416 33.333 0.00 0.00 36.50 1.82
431 432 8.302515 TGAAGGACCGAGTAAATACTAAATCT 57.697 34.615 0.00 0.00 36.50 2.40
432 433 8.195436 TGAAGGACCGAGTAAATACTAAATCTG 58.805 37.037 0.00 0.00 36.50 2.90
433 434 7.657023 AGGACCGAGTAAATACTAAATCTGT 57.343 36.000 0.00 0.00 36.50 3.41
434 435 8.757982 AGGACCGAGTAAATACTAAATCTGTA 57.242 34.615 0.00 0.00 36.50 2.74
435 436 8.628280 AGGACCGAGTAAATACTAAATCTGTAC 58.372 37.037 0.00 0.00 36.50 2.90
436 437 7.864882 GGACCGAGTAAATACTAAATCTGTACC 59.135 40.741 0.00 0.00 36.50 3.34
437 438 7.420800 ACCGAGTAAATACTAAATCTGTACCG 58.579 38.462 0.00 0.00 36.50 4.02
438 439 6.860023 CCGAGTAAATACTAAATCTGTACCGG 59.140 42.308 0.00 0.00 36.50 5.28
439 440 7.255242 CCGAGTAAATACTAAATCTGTACCGGA 60.255 40.741 9.46 0.00 36.50 5.14
440 441 8.295288 CGAGTAAATACTAAATCTGTACCGGAT 58.705 37.037 9.46 0.00 36.50 4.18
441 442 9.623350 GAGTAAATACTAAATCTGTACCGGATC 57.377 37.037 9.46 0.13 36.50 3.36
442 443 8.583296 AGTAAATACTAAATCTGTACCGGATCC 58.417 37.037 9.46 0.00 34.13 3.36
443 444 7.613551 AAATACTAAATCTGTACCGGATCCT 57.386 36.000 9.46 0.00 0.00 3.24
444 445 7.613551 AATACTAAATCTGTACCGGATCCTT 57.386 36.000 9.46 0.00 0.00 3.36
445 446 8.716674 AATACTAAATCTGTACCGGATCCTTA 57.283 34.615 9.46 0.00 0.00 2.69
446 447 8.716674 ATACTAAATCTGTACCGGATCCTTAA 57.283 34.615 9.46 0.00 0.00 1.85
447 448 7.613551 ACTAAATCTGTACCGGATCCTTAAT 57.386 36.000 9.46 0.00 0.00 1.40
448 449 7.668492 ACTAAATCTGTACCGGATCCTTAATC 58.332 38.462 9.46 0.00 0.00 1.75
449 450 6.749036 AAATCTGTACCGGATCCTTAATCT 57.251 37.500 9.46 0.00 34.56 2.40
450 451 6.749036 AATCTGTACCGGATCCTTAATCTT 57.251 37.500 9.46 0.00 34.56 2.40
451 452 6.749036 ATCTGTACCGGATCCTTAATCTTT 57.251 37.500 9.46 0.00 34.56 2.52
452 453 5.914033 TCTGTACCGGATCCTTAATCTTTG 58.086 41.667 9.46 0.00 34.56 2.77
453 454 4.448210 TGTACCGGATCCTTAATCTTTGC 58.552 43.478 9.46 0.00 34.56 3.68
454 455 3.644966 ACCGGATCCTTAATCTTTGCA 57.355 42.857 9.46 0.00 34.56 4.08
455 456 3.963129 ACCGGATCCTTAATCTTTGCAA 58.037 40.909 9.46 0.00 34.56 4.08
456 457 4.536765 ACCGGATCCTTAATCTTTGCAAT 58.463 39.130 9.46 0.00 34.56 3.56
457 458 5.690865 ACCGGATCCTTAATCTTTGCAATA 58.309 37.500 9.46 0.00 34.56 1.90
458 459 6.126409 ACCGGATCCTTAATCTTTGCAATAA 58.874 36.000 9.46 0.00 34.56 1.40
459 460 6.605594 ACCGGATCCTTAATCTTTGCAATAAA 59.394 34.615 9.46 0.00 34.56 1.40
460 461 7.141363 CCGGATCCTTAATCTTTGCAATAAAG 58.859 38.462 10.75 0.00 34.56 1.85
461 462 6.638468 CGGATCCTTAATCTTTGCAATAAAGC 59.362 38.462 10.75 0.00 34.56 3.51
462 463 7.469181 CGGATCCTTAATCTTTGCAATAAAGCT 60.469 37.037 10.75 0.00 34.56 3.74
463 464 7.650903 GGATCCTTAATCTTTGCAATAAAGCTG 59.349 37.037 3.84 0.00 34.56 4.24
464 465 6.866480 TCCTTAATCTTTGCAATAAAGCTGG 58.134 36.000 0.00 0.00 34.99 4.85
465 466 6.437162 TCCTTAATCTTTGCAATAAAGCTGGT 59.563 34.615 0.00 0.00 34.99 4.00
466 467 6.753744 CCTTAATCTTTGCAATAAAGCTGGTC 59.246 38.462 0.00 0.00 34.99 4.02
467 468 5.726980 AATCTTTGCAATAAAGCTGGTCA 57.273 34.783 0.00 0.00 34.99 4.02
468 469 5.927281 ATCTTTGCAATAAAGCTGGTCAT 57.073 34.783 0.00 0.00 34.99 3.06
469 470 7.408756 AATCTTTGCAATAAAGCTGGTCATA 57.591 32.000 0.00 0.00 34.99 2.15
470 471 6.832520 TCTTTGCAATAAAGCTGGTCATAA 57.167 33.333 0.00 0.00 34.99 1.90
471 472 7.225784 TCTTTGCAATAAAGCTGGTCATAAA 57.774 32.000 0.00 0.00 34.99 1.40
472 473 7.315142 TCTTTGCAATAAAGCTGGTCATAAAG 58.685 34.615 0.00 0.00 34.99 1.85
473 474 4.997565 TGCAATAAAGCTGGTCATAAAGC 58.002 39.130 0.00 0.00 39.82 3.51
483 484 6.112994 GCTGGTCATAAAGCTTCTTTCTAC 57.887 41.667 0.00 0.00 36.47 2.59
484 485 5.643777 GCTGGTCATAAAGCTTCTTTCTACA 59.356 40.000 0.00 0.00 36.47 2.74
485 486 6.183360 GCTGGTCATAAAGCTTCTTTCTACAG 60.183 42.308 0.00 5.09 36.47 2.74
486 487 7.004555 TGGTCATAAAGCTTCTTTCTACAGA 57.995 36.000 0.00 0.00 0.00 3.41
487 488 7.624549 TGGTCATAAAGCTTCTTTCTACAGAT 58.375 34.615 0.00 0.00 0.00 2.90
488 489 8.758829 TGGTCATAAAGCTTCTTTCTACAGATA 58.241 33.333 0.00 0.00 0.00 1.98
489 490 9.601217 GGTCATAAAGCTTCTTTCTACAGATAA 57.399 33.333 0.00 0.00 0.00 1.75
532 533 8.299570 GCAGGATTGAAGTCTCTTTTTGAAATA 58.700 33.333 0.00 0.00 0.00 1.40
550 551 8.610248 TTGAAATAAAGTGAACTAATCCGTCA 57.390 30.769 0.00 0.00 0.00 4.35
554 555 8.561738 AATAAAGTGAACTAATCCGTCATGTT 57.438 30.769 0.00 0.00 0.00 2.71
557 558 7.596749 AAGTGAACTAATCCGTCATGTTTAG 57.403 36.000 0.00 0.00 0.00 1.85
569 570 4.192317 GTCATGTTTAGGTGTCCTCCATC 58.808 47.826 0.00 0.00 34.61 3.51
573 574 4.367166 TGTTTAGGTGTCCTCCATCCATA 58.633 43.478 0.00 0.00 34.61 2.74
575 576 5.431731 TGTTTAGGTGTCCTCCATCCATAAT 59.568 40.000 0.00 0.00 34.61 1.28
614 615 1.548719 GTTATGGGGTTTTGGACTGGC 59.451 52.381 0.00 0.00 0.00 4.85
619 620 1.182667 GGGTTTTGGACTGGCATACC 58.817 55.000 0.00 0.00 0.00 2.73
620 621 1.272480 GGGTTTTGGACTGGCATACCT 60.272 52.381 10.56 0.00 36.63 3.08
621 622 2.025699 GGGTTTTGGACTGGCATACCTA 60.026 50.000 10.56 1.86 36.63 3.08
623 624 3.054655 GGTTTTGGACTGGCATACCTAGA 60.055 47.826 10.56 0.00 36.63 2.43
624 625 4.385310 GGTTTTGGACTGGCATACCTAGAT 60.385 45.833 10.56 0.00 36.63 1.98
626 627 5.450818 TTTGGACTGGCATACCTAGATTT 57.549 39.130 10.56 0.00 36.63 2.17
627 628 4.422073 TGGACTGGCATACCTAGATTTG 57.578 45.455 10.56 0.00 36.63 2.32
631 632 5.513094 GGACTGGCATACCTAGATTTGCATA 60.513 44.000 1.70 0.00 36.82 3.14
639 640 9.599866 GCATACCTAGATTTGCATATACATGTA 57.400 33.333 8.27 8.27 35.22 2.29
642 643 8.207350 ACCTAGATTTGCATATACATGTACCT 57.793 34.615 7.96 0.00 34.40 3.08
663 664 9.001542 GTACCTACTACATCGTAAATCTGAGAT 57.998 37.037 0.00 0.00 0.00 2.75
675 680 1.326328 TCTGAGATCCATGAGAGCGG 58.674 55.000 0.00 0.00 35.47 5.52
677 682 1.411977 CTGAGATCCATGAGAGCGGTT 59.588 52.381 0.00 0.00 35.47 4.44
696 701 5.119279 GCGGTTAAGATAGATGCATACACTG 59.881 44.000 0.00 0.00 0.00 3.66
709 715 3.808618 GCATACACTGGATCCCTCATTCC 60.809 52.174 9.90 0.00 0.00 3.01
716 722 2.507058 TGGATCCCTCATTCCTCTTGTG 59.493 50.000 9.90 0.00 32.95 3.33
729 735 1.515952 CTTGTGCCTCTCTCGAGCG 60.516 63.158 7.81 0.48 35.90 5.03
732 738 3.819920 TGCCTCTCTCGAGCGCTG 61.820 66.667 18.48 7.71 35.66 5.18
747 753 2.045926 CTGCCTCCCGGACCAAAG 60.046 66.667 0.73 0.00 0.00 2.77
765 771 3.806625 AAGCATTTGCAGTTGTTCTGT 57.193 38.095 5.20 0.00 45.23 3.41
766 772 4.916983 AAGCATTTGCAGTTGTTCTGTA 57.083 36.364 5.20 0.00 45.23 2.74
767 773 5.458041 AAGCATTTGCAGTTGTTCTGTAT 57.542 34.783 5.20 0.00 45.23 2.29
768 774 5.458041 AGCATTTGCAGTTGTTCTGTATT 57.542 34.783 5.20 0.00 45.23 1.89
769 775 5.224888 AGCATTTGCAGTTGTTCTGTATTG 58.775 37.500 5.20 0.00 45.23 1.90
770 776 4.984161 GCATTTGCAGTTGTTCTGTATTGT 59.016 37.500 0.00 0.00 45.23 2.71
771 777 6.016360 AGCATTTGCAGTTGTTCTGTATTGTA 60.016 34.615 5.20 0.00 45.23 2.41
801 825 7.620880 TGCTACCATAAGCCGAATTAATCTAT 58.379 34.615 0.00 0.00 42.05 1.98
822 846 2.968574 TCTTCATATCAGGGAGGTCAGC 59.031 50.000 0.00 0.00 0.00 4.26
824 848 3.903530 TCATATCAGGGAGGTCAGCTA 57.096 47.619 0.00 0.00 0.00 3.32
825 849 3.772387 TCATATCAGGGAGGTCAGCTAG 58.228 50.000 0.00 0.00 0.00 3.42
838 872 3.594134 GTCAGCTAGCTTGTTCAGTCAT 58.406 45.455 16.46 0.00 0.00 3.06
866 912 6.530913 AAGTATTCATACATTAGCACGCTG 57.469 37.500 0.72 0.00 35.74 5.18
873 919 3.980646 ACATTAGCACGCTGTTTGAAA 57.019 38.095 0.72 0.00 0.00 2.69
882 928 6.086222 AGCACGCTGTTTGAAACTTTATATG 58.914 36.000 9.69 2.21 0.00 1.78
886 932 6.362283 ACGCTGTTTGAAACTTTATATGTTGC 59.638 34.615 9.69 0.00 0.00 4.17
945 1008 4.283403 GCTTGCAGGTTGGCGCAA 62.283 61.111 10.83 0.00 45.45 4.85
987 1050 1.153107 TCTGCGATGCCATCTTGGG 60.153 57.895 2.75 0.00 38.19 4.12
995 1058 0.482446 TGCCATCTTGGGTGGAACTT 59.518 50.000 0.46 0.00 39.12 2.66
1082 1145 4.008933 GCAGGGATCCGCCGCTAT 62.009 66.667 5.45 0.00 37.63 2.97
1100 1163 3.489047 GCTATAGCGTCTCTTTTGCTCTG 59.511 47.826 9.40 0.00 40.06 3.35
1103 1166 2.838736 AGCGTCTCTTTTGCTCTGAAA 58.161 42.857 0.00 0.00 32.44 2.69
1116 1179 1.627834 CTCTGAAAGCCCTTCTCTGGT 59.372 52.381 0.00 0.00 34.86 4.00
1176 1239 0.389948 GGGTCACATGTCCTCGTCAC 60.390 60.000 0.00 0.00 0.00 3.67
1180 1243 1.686587 TCACATGTCCTCGTCACTGTT 59.313 47.619 0.00 0.00 0.00 3.16
1188 1251 3.245519 GTCCTCGTCACTGTTGAAGAAAC 59.754 47.826 0.00 0.00 39.41 2.78
1275 1338 4.508128 CCATCACCGCGTACGCCT 62.508 66.667 32.64 16.56 38.22 5.52
1368 1431 3.575630 CTCTACAAGTACAGCTTCGCAA 58.424 45.455 0.00 0.00 34.69 4.85
1369 1432 3.985008 TCTACAAGTACAGCTTCGCAAA 58.015 40.909 0.00 0.00 34.69 3.68
1428 1491 0.179145 CGCCGGATTCGTCAAGTACT 60.179 55.000 5.05 0.00 33.95 2.73
1454 1517 1.142465 AGGATATGGGCACTGAAGCTG 59.858 52.381 0.00 0.00 34.17 4.24
1478 1541 4.026052 CAAGCAAGAAGGGTTCCCATTAT 58.974 43.478 10.73 0.00 0.00 1.28
1483 1546 5.211201 CAAGAAGGGTTCCCATTATGGAAT 58.789 41.667 13.63 0.00 45.74 3.01
1503 1575 2.838736 TGCCAGAGTTGAACAGACTTC 58.161 47.619 0.00 0.00 0.00 3.01
1504 1576 2.147150 GCCAGAGTTGAACAGACTTCC 58.853 52.381 0.00 0.00 0.00 3.46
1508 1580 4.443457 CCAGAGTTGAACAGACTTCCTGAA 60.443 45.833 0.00 0.00 45.78 3.02
1512 1584 3.475566 TGAACAGACTTCCTGAACCTG 57.524 47.619 0.00 0.00 45.78 4.00
1513 1585 2.771943 TGAACAGACTTCCTGAACCTGT 59.228 45.455 0.00 0.00 45.78 4.00
1514 1586 3.199946 TGAACAGACTTCCTGAACCTGTT 59.800 43.478 16.42 16.42 46.78 3.16
1515 1587 3.477210 ACAGACTTCCTGAACCTGTTC 57.523 47.619 3.07 3.07 45.78 3.18
1517 1589 2.370189 CAGACTTCCTGAACCTGTTCCT 59.630 50.000 7.51 0.00 45.78 3.36
1520 1592 5.422331 CAGACTTCCTGAACCTGTTCCTATA 59.578 44.000 7.51 0.00 45.78 1.31
1521 1593 6.098982 CAGACTTCCTGAACCTGTTCCTATAT 59.901 42.308 7.51 0.00 45.78 0.86
1523 1595 7.844779 AGACTTCCTGAACCTGTTCCTATATTA 59.155 37.037 7.51 0.00 38.77 0.98
1525 1597 9.004231 ACTTCCTGAACCTGTTCCTATATTATT 57.996 33.333 7.51 0.00 38.77 1.40
1555 1933 4.790718 AAAAAGGGAGCGTAGGGATATT 57.209 40.909 0.00 0.00 0.00 1.28
1556 1934 4.790718 AAAAGGGAGCGTAGGGATATTT 57.209 40.909 0.00 0.00 0.00 1.40
1557 1935 5.899631 AAAAGGGAGCGTAGGGATATTTA 57.100 39.130 0.00 0.00 0.00 1.40
1558 1936 6.449830 AAAAGGGAGCGTAGGGATATTTAT 57.550 37.500 0.00 0.00 0.00 1.40
1559 1937 6.449830 AAAGGGAGCGTAGGGATATTTATT 57.550 37.500 0.00 0.00 0.00 1.40
1560 1938 7.563724 AAAGGGAGCGTAGGGATATTTATTA 57.436 36.000 0.00 0.00 0.00 0.98
1561 1939 6.541934 AGGGAGCGTAGGGATATTTATTAC 57.458 41.667 0.00 0.00 0.00 1.89
1562 1940 5.126707 AGGGAGCGTAGGGATATTTATTACG 59.873 44.000 0.00 0.00 39.86 3.18
1563 1941 5.126061 GGGAGCGTAGGGATATTTATTACGA 59.874 44.000 6.54 0.00 39.39 3.43
1564 1942 6.350445 GGGAGCGTAGGGATATTTATTACGAA 60.350 42.308 6.54 0.00 39.39 3.85
1565 1943 7.092716 GGAGCGTAGGGATATTTATTACGAAA 58.907 38.462 6.54 0.00 39.39 3.46
1566 1944 7.599998 GGAGCGTAGGGATATTTATTACGAAAA 59.400 37.037 6.54 0.00 39.39 2.29
1567 1945 8.530269 AGCGTAGGGATATTTATTACGAAAAG 57.470 34.615 6.54 0.00 39.39 2.27
1568 1946 7.117379 AGCGTAGGGATATTTATTACGAAAAGC 59.883 37.037 6.54 0.00 39.39 3.51
1578 1956 4.687464 CGAAAAGCGTAGGTGGGT 57.313 55.556 0.00 0.00 39.47 4.51
1579 1957 2.452767 CGAAAAGCGTAGGTGGGTC 58.547 57.895 0.00 0.00 39.47 4.46
1580 1958 1.017701 CGAAAAGCGTAGGTGGGTCC 61.018 60.000 0.00 0.00 39.47 4.46
1581 1959 1.004200 AAAAGCGTAGGTGGGTCCG 60.004 57.895 0.00 0.00 39.47 4.79
1582 1960 3.600898 AAAGCGTAGGTGGGTCCGC 62.601 63.158 0.00 0.00 46.07 5.54
1584 1962 4.382320 GCGTAGGTGGGTCCGCAA 62.382 66.667 2.81 0.00 45.12 4.85
1585 1963 2.344500 CGTAGGTGGGTCCGCAAA 59.656 61.111 2.81 0.00 41.99 3.68
1586 1964 1.301874 CGTAGGTGGGTCCGCAAAA 60.302 57.895 2.81 0.00 41.99 2.44
1587 1965 0.675522 CGTAGGTGGGTCCGCAAAAT 60.676 55.000 2.81 0.00 41.99 1.82
1588 1966 1.405797 CGTAGGTGGGTCCGCAAAATA 60.406 52.381 2.81 0.00 41.99 1.40
1589 1967 2.011947 GTAGGTGGGTCCGCAAAATAC 58.988 52.381 2.81 0.00 41.99 1.89
1590 1968 0.323087 AGGTGGGTCCGCAAAATACC 60.323 55.000 2.81 0.00 41.99 2.73
1591 1969 0.323087 GGTGGGTCCGCAAAATACCT 60.323 55.000 2.81 0.00 33.59 3.08
1592 1970 1.541379 GTGGGTCCGCAAAATACCTT 58.459 50.000 0.00 0.00 33.59 3.50
1593 1971 1.201414 GTGGGTCCGCAAAATACCTTG 59.799 52.381 0.00 0.00 33.59 3.61
1594 1972 0.172578 GGGTCCGCAAAATACCTTGC 59.827 55.000 0.00 0.00 46.70 4.01
1623 2001 5.462068 GGTTCATCCAAAACAAACAGCTTAC 59.538 40.000 0.00 0.00 35.97 2.34
1662 2040 1.605710 GATGACAGCACACAAGTTGCT 59.394 47.619 1.81 0.00 39.79 3.91
1675 2053 4.919168 CACAAGTTGCTGGATGTATTTGTG 59.081 41.667 1.81 0.00 38.45 3.33
1717 2095 0.745845 ATGAGGCGTCCATTGTCTGC 60.746 55.000 3.56 0.00 0.00 4.26
1759 2152 6.496571 ACTACTAAAGAGTCATGCGTATCAC 58.503 40.000 0.00 0.00 37.10 3.06
1760 2153 4.683832 ACTAAAGAGTCATGCGTATCACC 58.316 43.478 0.00 0.00 0.00 4.02
1776 2175 2.344203 ACCCTGACGAGAGCGAAGG 61.344 63.158 0.00 0.00 41.39 3.46
1813 2212 5.460720 GGGGAAGAAGTATACAGGGGAGATA 60.461 48.000 5.50 0.00 0.00 1.98
1932 2367 4.695217 TTTCACTTGTTTCTTGCTTCGT 57.305 36.364 0.00 0.00 0.00 3.85
2127 2569 4.094294 GGCTAATACAATTCTGTTCGCACA 59.906 41.667 0.00 0.00 36.96 4.57
2155 2603 1.276421 CTCGTCAAGGATGGAAGGTGT 59.724 52.381 0.00 0.00 0.00 4.16
2166 2614 1.087501 GGAAGGTGTTCCGATTCTGC 58.912 55.000 0.00 0.00 43.13 4.26
2171 2619 2.287274 TGTTCCGATTCTGCCGGGA 61.287 57.895 2.18 0.00 46.47 5.14
2253 2701 1.749033 GTCTGATTAGGCTCCGGGG 59.251 63.158 0.00 0.00 0.00 5.73
2494 2945 1.064505 CATATCGCCACAAGCACCTTG 59.935 52.381 3.57 3.57 45.85 3.61
2747 3234 0.693049 AAGGGGTCTTCGTGAGCAAT 59.307 50.000 11.08 0.00 44.40 3.56
2896 3425 1.933021 AGGTGTGGACGGAGATGTTA 58.067 50.000 0.00 0.00 0.00 2.41
3011 3567 2.126071 CTGCTGCCATGCACAAGC 60.126 61.111 0.00 0.00 38.12 4.01
3038 3594 3.914426 AGCCGGTCAAAGTAGATGATT 57.086 42.857 1.90 0.00 0.00 2.57
3046 3602 5.582665 GGTCAAAGTAGATGATTGGACTGTC 59.417 44.000 0.00 0.00 0.00 3.51
3197 3766 8.234546 AGTAATGTGTAATTCCGTTTTTGCTAG 58.765 33.333 0.00 0.00 0.00 3.42
3377 3949 6.256686 GTTGATGAATCAGATTTCTGCTGTC 58.743 40.000 2.60 1.45 43.46 3.51
3432 4004 2.328099 GCTGTTGGCTTAGCGCTGT 61.328 57.895 22.90 0.00 39.13 4.40
3435 4007 0.817634 TGTTGGCTTAGCGCTGTTGT 60.818 50.000 22.90 0.00 39.13 3.32
3443 4015 3.799035 CTTAGCGCTGTTGTTTGTACTG 58.201 45.455 22.90 0.00 0.00 2.74
3522 4094 7.463515 GCTTAGCTCAGTCTTTCTTTATCGAAC 60.464 40.741 0.00 0.00 0.00 3.95
3627 4205 2.233186 CACACAGCAAGAGATCCAGAGA 59.767 50.000 0.00 0.00 0.00 3.10
3923 4508 3.426560 CGCTGAATCACAAGCTTATTGCA 60.427 43.478 0.00 0.00 45.94 4.08
3989 4574 4.357947 GTGGCGAGTGGTCAGCGA 62.358 66.667 0.00 0.00 0.00 4.93
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 2.785681 GCACGCAAGAATGACGATCAAG 60.786 50.000 0.00 0.00 43.62 3.02
8 9 1.128507 GCACGCAAGAATGACGATCAA 59.871 47.619 0.00 0.00 43.62 2.57
9 10 0.721154 GCACGCAAGAATGACGATCA 59.279 50.000 0.00 0.00 43.62 2.92
10 11 1.002366 AGCACGCAAGAATGACGATC 58.998 50.000 0.00 0.00 43.62 3.69
11 12 1.129251 CAAGCACGCAAGAATGACGAT 59.871 47.619 0.00 0.00 43.62 3.73
12 13 0.512518 CAAGCACGCAAGAATGACGA 59.487 50.000 0.00 0.00 43.62 4.20
13 14 0.235665 ACAAGCACGCAAGAATGACG 59.764 50.000 0.00 0.00 43.62 4.35
14 15 2.310577 GAACAAGCACGCAAGAATGAC 58.689 47.619 0.00 0.00 43.62 3.06
15 16 1.266718 GGAACAAGCACGCAAGAATGA 59.733 47.619 0.00 0.00 43.62 2.57
16 17 1.666888 GGGAACAAGCACGCAAGAATG 60.667 52.381 0.00 0.00 43.62 2.67
17 18 0.598065 GGGAACAAGCACGCAAGAAT 59.402 50.000 0.00 0.00 43.62 2.40
18 19 0.749818 TGGGAACAAGCACGCAAGAA 60.750 50.000 0.00 0.00 38.20 2.52
19 20 1.153066 TGGGAACAAGCACGCAAGA 60.153 52.632 0.00 0.00 38.20 3.02
20 21 1.283793 CTGGGAACAAGCACGCAAG 59.716 57.895 0.00 0.00 42.06 4.01
21 22 1.034838 AACTGGGAACAAGCACGCAA 61.035 50.000 0.00 0.00 42.06 4.85
22 23 0.179043 TAACTGGGAACAAGCACGCA 60.179 50.000 0.00 0.00 42.06 5.24
23 24 0.517316 CTAACTGGGAACAAGCACGC 59.483 55.000 0.00 0.00 42.06 5.34
24 25 0.517316 GCTAACTGGGAACAAGCACG 59.483 55.000 0.00 0.00 40.61 5.34
25 26 1.537202 CAGCTAACTGGGAACAAGCAC 59.463 52.381 0.00 0.00 42.80 4.40
26 27 1.896220 CAGCTAACTGGGAACAAGCA 58.104 50.000 0.00 0.00 42.80 3.91
27 28 0.523519 GCAGCTAACTGGGAACAAGC 59.476 55.000 0.00 0.00 44.63 4.01
28 29 2.191128 AGCAGCTAACTGGGAACAAG 57.809 50.000 0.00 0.00 44.63 3.16
29 30 5.630415 ATATAGCAGCTAACTGGGAACAA 57.370 39.130 6.13 0.00 44.63 2.83
30 31 6.935240 ATATATAGCAGCTAACTGGGAACA 57.065 37.500 6.13 0.00 44.63 3.18
31 32 7.837863 TGTATATATAGCAGCTAACTGGGAAC 58.162 38.462 6.13 0.61 44.63 3.62
32 33 8.609617 ATGTATATATAGCAGCTAACTGGGAA 57.390 34.615 6.13 0.00 44.63 3.97
33 34 8.609617 AATGTATATATAGCAGCTAACTGGGA 57.390 34.615 6.13 0.00 44.63 4.37
34 35 7.928706 GGAATGTATATATAGCAGCTAACTGGG 59.071 40.741 6.13 0.00 44.63 4.45
35 36 7.928706 GGGAATGTATATATAGCAGCTAACTGG 59.071 40.741 6.13 0.00 44.63 4.00
37 38 8.846423 AGGGAATGTATATATAGCAGCTAACT 57.154 34.615 6.13 0.00 0.00 2.24
40 41 9.937876 AGTAAGGGAATGTATATATAGCAGCTA 57.062 33.333 4.10 4.10 0.00 3.32
41 42 8.846423 AGTAAGGGAATGTATATATAGCAGCT 57.154 34.615 0.00 0.00 0.00 4.24
42 43 9.892130 AAAGTAAGGGAATGTATATATAGCAGC 57.108 33.333 0.00 0.00 0.00 5.25
51 52 9.941325 TTACGAACAAAAGTAAGGGAATGTATA 57.059 29.630 0.00 0.00 0.00 1.47
52 53 8.724229 GTTACGAACAAAAGTAAGGGAATGTAT 58.276 33.333 0.00 0.00 34.02 2.29
53 54 7.173047 GGTTACGAACAAAAGTAAGGGAATGTA 59.827 37.037 0.00 0.00 34.02 2.29
54 55 6.016860 GGTTACGAACAAAAGTAAGGGAATGT 60.017 38.462 0.00 0.00 34.02 2.71
55 56 6.016943 TGGTTACGAACAAAAGTAAGGGAATG 60.017 38.462 0.00 0.00 34.02 2.67
56 57 6.063404 TGGTTACGAACAAAAGTAAGGGAAT 58.937 36.000 0.00 0.00 34.02 3.01
57 58 5.435291 TGGTTACGAACAAAAGTAAGGGAA 58.565 37.500 0.00 0.00 34.02 3.97
58 59 5.033589 TGGTTACGAACAAAAGTAAGGGA 57.966 39.130 0.00 0.00 34.02 4.20
59 60 5.239963 ACATGGTTACGAACAAAAGTAAGGG 59.760 40.000 0.00 0.00 34.02 3.95
60 61 6.204108 AGACATGGTTACGAACAAAAGTAAGG 59.796 38.462 0.00 0.00 34.02 2.69
61 62 7.186021 AGACATGGTTACGAACAAAAGTAAG 57.814 36.000 0.00 0.00 34.02 2.34
62 63 7.927629 ACTAGACATGGTTACGAACAAAAGTAA 59.072 33.333 0.00 0.00 0.00 2.24
63 64 7.436118 ACTAGACATGGTTACGAACAAAAGTA 58.564 34.615 0.00 0.00 0.00 2.24
64 65 6.285990 ACTAGACATGGTTACGAACAAAAGT 58.714 36.000 0.00 0.00 0.00 2.66
65 66 6.780706 ACTAGACATGGTTACGAACAAAAG 57.219 37.500 0.00 0.00 0.00 2.27
66 67 6.074195 CGAACTAGACATGGTTACGAACAAAA 60.074 38.462 0.00 0.00 29.00 2.44
67 68 5.403166 CGAACTAGACATGGTTACGAACAAA 59.597 40.000 0.00 0.00 29.00 2.83
68 69 4.919168 CGAACTAGACATGGTTACGAACAA 59.081 41.667 0.00 0.00 29.00 2.83
69 70 4.022935 ACGAACTAGACATGGTTACGAACA 60.023 41.667 0.00 0.00 29.00 3.18
70 71 4.479619 ACGAACTAGACATGGTTACGAAC 58.520 43.478 0.00 0.00 29.00 3.95
71 72 4.771590 ACGAACTAGACATGGTTACGAA 57.228 40.909 0.00 0.00 29.00 3.85
72 73 4.216042 TCAACGAACTAGACATGGTTACGA 59.784 41.667 0.00 0.00 29.00 3.43
73 74 4.478699 TCAACGAACTAGACATGGTTACG 58.521 43.478 0.00 0.00 29.00 3.18
74 75 6.774354 TTTCAACGAACTAGACATGGTTAC 57.226 37.500 0.00 0.00 29.00 2.50
75 76 6.987992 ACTTTTCAACGAACTAGACATGGTTA 59.012 34.615 0.00 0.00 29.00 2.85
76 77 5.820947 ACTTTTCAACGAACTAGACATGGTT 59.179 36.000 0.00 0.00 31.98 3.67
77 78 5.236478 CACTTTTCAACGAACTAGACATGGT 59.764 40.000 0.00 0.00 0.00 3.55
78 79 5.236478 ACACTTTTCAACGAACTAGACATGG 59.764 40.000 0.00 0.00 0.00 3.66
79 80 6.287107 ACACTTTTCAACGAACTAGACATG 57.713 37.500 0.00 0.00 0.00 3.21
80 81 6.537301 TCAACACTTTTCAACGAACTAGACAT 59.463 34.615 0.00 0.00 0.00 3.06
81 82 5.870433 TCAACACTTTTCAACGAACTAGACA 59.130 36.000 0.00 0.00 0.00 3.41
82 83 6.340537 TCAACACTTTTCAACGAACTAGAC 57.659 37.500 0.00 0.00 0.00 2.59
83 84 6.369340 TGTTCAACACTTTTCAACGAACTAGA 59.631 34.615 0.00 0.00 33.98 2.43
84 85 6.539324 TGTTCAACACTTTTCAACGAACTAG 58.461 36.000 0.00 0.00 33.98 2.57
85 86 6.483385 TGTTCAACACTTTTCAACGAACTA 57.517 33.333 0.00 0.00 33.98 2.24
86 87 5.365403 TGTTCAACACTTTTCAACGAACT 57.635 34.783 0.00 0.00 33.98 3.01
87 88 5.854338 TCTTGTTCAACACTTTTCAACGAAC 59.146 36.000 0.00 0.00 33.57 3.95
88 89 6.003234 TCTTGTTCAACACTTTTCAACGAA 57.997 33.333 0.00 0.00 0.00 3.85
89 90 5.614923 TCTTGTTCAACACTTTTCAACGA 57.385 34.783 0.00 0.00 0.00 3.85
90 91 4.262976 GCTCTTGTTCAACACTTTTCAACG 59.737 41.667 0.00 0.00 0.00 4.10
91 92 5.160641 TGCTCTTGTTCAACACTTTTCAAC 58.839 37.500 0.00 0.00 0.00 3.18
92 93 5.384063 TGCTCTTGTTCAACACTTTTCAA 57.616 34.783 0.00 0.00 0.00 2.69
93 94 5.450412 GGATGCTCTTGTTCAACACTTTTCA 60.450 40.000 0.00 0.00 0.00 2.69
94 95 4.978580 GGATGCTCTTGTTCAACACTTTTC 59.021 41.667 0.00 0.00 0.00 2.29
95 96 4.402155 TGGATGCTCTTGTTCAACACTTTT 59.598 37.500 0.00 0.00 0.00 2.27
96 97 3.953612 TGGATGCTCTTGTTCAACACTTT 59.046 39.130 0.00 0.00 0.00 2.66
97 98 3.554934 TGGATGCTCTTGTTCAACACTT 58.445 40.909 0.00 0.00 0.00 3.16
98 99 3.213206 TGGATGCTCTTGTTCAACACT 57.787 42.857 0.00 0.00 0.00 3.55
99 100 3.829948 CATGGATGCTCTTGTTCAACAC 58.170 45.455 0.00 0.00 0.00 3.32
113 114 4.794981 GCATGGACAATGTAAGCATGGATG 60.795 45.833 0.00 0.00 38.65 3.51
114 115 3.319972 GCATGGACAATGTAAGCATGGAT 59.680 43.478 0.00 0.00 38.65 3.41
115 116 2.689471 GCATGGACAATGTAAGCATGGA 59.311 45.455 0.00 0.00 38.65 3.41
116 117 2.427812 TGCATGGACAATGTAAGCATGG 59.572 45.455 0.00 0.00 38.65 3.66
117 118 3.786516 TGCATGGACAATGTAAGCATG 57.213 42.857 0.00 0.00 38.65 4.06
118 119 6.659745 AATATGCATGGACAATGTAAGCAT 57.340 33.333 10.16 15.06 42.98 3.79
119 120 6.468333 AAATATGCATGGACAATGTAAGCA 57.532 33.333 10.16 4.50 38.65 3.91
120 121 7.169035 CAAAATATGCATGGACAATGTAAGC 57.831 36.000 10.16 0.00 38.65 3.09
138 139 8.563732 GGCCAGTTCAAAAATAAAAGCAAAATA 58.436 29.630 0.00 0.00 0.00 1.40
139 140 7.285172 AGGCCAGTTCAAAAATAAAAGCAAAAT 59.715 29.630 5.01 0.00 0.00 1.82
140 141 6.601217 AGGCCAGTTCAAAAATAAAAGCAAAA 59.399 30.769 5.01 0.00 0.00 2.44
141 142 6.118852 AGGCCAGTTCAAAAATAAAAGCAAA 58.881 32.000 5.01 0.00 0.00 3.68
142 143 5.679601 AGGCCAGTTCAAAAATAAAAGCAA 58.320 33.333 5.01 0.00 0.00 3.91
143 144 5.289083 AGGCCAGTTCAAAAATAAAAGCA 57.711 34.783 5.01 0.00 0.00 3.91
144 145 4.690748 GGAGGCCAGTTCAAAAATAAAAGC 59.309 41.667 5.01 0.00 0.00 3.51
145 146 6.015095 AGAGGAGGCCAGTTCAAAAATAAAAG 60.015 38.462 5.01 0.00 0.00 2.27
146 147 5.838521 AGAGGAGGCCAGTTCAAAAATAAAA 59.161 36.000 5.01 0.00 0.00 1.52
147 148 5.393866 AGAGGAGGCCAGTTCAAAAATAAA 58.606 37.500 5.01 0.00 0.00 1.40
148 149 4.998051 AGAGGAGGCCAGTTCAAAAATAA 58.002 39.130 5.01 0.00 0.00 1.40
149 150 4.657814 AGAGGAGGCCAGTTCAAAAATA 57.342 40.909 5.01 0.00 0.00 1.40
150 151 3.532641 AGAGGAGGCCAGTTCAAAAAT 57.467 42.857 5.01 0.00 0.00 1.82
151 152 2.958355 CAAGAGGAGGCCAGTTCAAAAA 59.042 45.455 5.01 0.00 0.00 1.94
152 153 2.174639 TCAAGAGGAGGCCAGTTCAAAA 59.825 45.455 5.01 0.00 0.00 2.44
153 154 1.774254 TCAAGAGGAGGCCAGTTCAAA 59.226 47.619 5.01 0.00 0.00 2.69
154 155 1.434188 TCAAGAGGAGGCCAGTTCAA 58.566 50.000 5.01 0.00 0.00 2.69
155 156 1.661463 ATCAAGAGGAGGCCAGTTCA 58.339 50.000 5.01 0.00 0.00 3.18
156 157 2.290577 ACAATCAAGAGGAGGCCAGTTC 60.291 50.000 5.01 0.00 0.00 3.01
157 158 1.707427 ACAATCAAGAGGAGGCCAGTT 59.293 47.619 5.01 0.00 0.00 3.16
158 159 1.366319 ACAATCAAGAGGAGGCCAGT 58.634 50.000 5.01 0.00 0.00 4.00
159 160 2.490903 CAAACAATCAAGAGGAGGCCAG 59.509 50.000 5.01 0.00 0.00 4.85
160 161 2.158475 ACAAACAATCAAGAGGAGGCCA 60.158 45.455 5.01 0.00 0.00 5.36
161 162 2.489722 GACAAACAATCAAGAGGAGGCC 59.510 50.000 0.00 0.00 0.00 5.19
162 163 3.057946 GTGACAAACAATCAAGAGGAGGC 60.058 47.826 0.00 0.00 0.00 4.70
163 164 4.023707 GTGTGACAAACAATCAAGAGGAGG 60.024 45.833 0.00 0.00 41.57 4.30
164 165 4.818546 AGTGTGACAAACAATCAAGAGGAG 59.181 41.667 0.00 0.00 41.57 3.69
165 166 4.780815 AGTGTGACAAACAATCAAGAGGA 58.219 39.130 0.00 0.00 41.57 3.71
186 187 0.459237 GCACCTCATCAGTGACGGAG 60.459 60.000 14.05 14.05 37.42 4.63
187 188 1.184970 TGCACCTCATCAGTGACGGA 61.185 55.000 10.89 4.44 37.42 4.69
188 189 0.107993 ATGCACCTCATCAGTGACGG 60.108 55.000 0.00 0.00 37.42 4.79
189 190 2.196749 GTATGCACCTCATCAGTGACG 58.803 52.381 0.00 0.00 37.42 4.35
190 191 2.093500 TGGTATGCACCTCATCAGTGAC 60.093 50.000 0.00 0.00 45.98 3.67
191 192 2.187100 TGGTATGCACCTCATCAGTGA 58.813 47.619 0.00 0.00 45.98 3.41
192 193 2.696989 TGGTATGCACCTCATCAGTG 57.303 50.000 0.00 0.00 45.98 3.66
193 194 3.939740 AATGGTATGCACCTCATCAGT 57.060 42.857 0.00 0.00 45.98 3.41
194 195 6.487668 TCATTTAATGGTATGCACCTCATCAG 59.512 38.462 5.02 0.00 45.98 2.90
195 196 6.363882 TCATTTAATGGTATGCACCTCATCA 58.636 36.000 5.02 0.00 45.98 3.07
196 197 6.882610 TCATTTAATGGTATGCACCTCATC 57.117 37.500 5.02 0.00 45.98 2.92
197 198 7.062322 TCTTCATTTAATGGTATGCACCTCAT 58.938 34.615 5.02 0.00 45.98 2.90
198 199 6.422333 TCTTCATTTAATGGTATGCACCTCA 58.578 36.000 5.02 0.00 45.98 3.86
199 200 6.942532 TCTTCATTTAATGGTATGCACCTC 57.057 37.500 5.02 0.00 45.98 3.85
200 201 7.615365 TCTTTCTTCATTTAATGGTATGCACCT 59.385 33.333 5.02 0.00 45.98 4.00
201 202 7.771183 TCTTTCTTCATTTAATGGTATGCACC 58.229 34.615 5.02 0.00 46.00 5.01
202 203 8.677300 TCTCTTTCTTCATTTAATGGTATGCAC 58.323 33.333 5.02 0.00 0.00 4.57
203 204 8.806429 TCTCTTTCTTCATTTAATGGTATGCA 57.194 30.769 5.02 0.00 0.00 3.96
243 244 9.855021 CGTGGTAGTACATCATTTCATATGATA 57.145 33.333 6.17 1.78 36.69 2.15
244 245 8.367911 ACGTGGTAGTACATCATTTCATATGAT 58.632 33.333 6.17 0.00 39.16 2.45
245 246 7.651704 CACGTGGTAGTACATCATTTCATATGA 59.348 37.037 7.95 0.00 0.00 2.15
246 247 7.438160 ACACGTGGTAGTACATCATTTCATATG 59.562 37.037 21.57 0.00 0.00 1.78
247 248 7.497595 ACACGTGGTAGTACATCATTTCATAT 58.502 34.615 21.57 0.00 0.00 1.78
248 249 6.869695 ACACGTGGTAGTACATCATTTCATA 58.130 36.000 21.57 0.00 0.00 2.15
249 250 5.730550 ACACGTGGTAGTACATCATTTCAT 58.269 37.500 21.57 0.00 0.00 2.57
250 251 5.142061 ACACGTGGTAGTACATCATTTCA 57.858 39.130 21.57 0.00 0.00 2.69
251 252 5.165676 TGACACGTGGTAGTACATCATTTC 58.834 41.667 21.57 3.30 0.00 2.17
252 253 5.142061 TGACACGTGGTAGTACATCATTT 57.858 39.130 21.57 0.00 0.00 2.32
253 254 4.794278 TGACACGTGGTAGTACATCATT 57.206 40.909 21.57 0.00 0.00 2.57
254 255 4.682787 CATGACACGTGGTAGTACATCAT 58.317 43.478 21.57 13.70 0.00 2.45
255 256 3.674955 GCATGACACGTGGTAGTACATCA 60.675 47.826 21.57 11.91 0.00 3.07
256 257 2.858344 GCATGACACGTGGTAGTACATC 59.142 50.000 21.57 6.04 0.00 3.06
257 258 2.232696 TGCATGACACGTGGTAGTACAT 59.767 45.455 21.57 11.65 0.00 2.29
258 259 1.614413 TGCATGACACGTGGTAGTACA 59.386 47.619 21.57 7.88 0.00 2.90
259 260 2.357327 TGCATGACACGTGGTAGTAC 57.643 50.000 21.57 5.18 0.00 2.73
260 261 2.494073 TCATGCATGACACGTGGTAGTA 59.506 45.455 25.42 6.65 0.00 1.82
261 262 1.275010 TCATGCATGACACGTGGTAGT 59.725 47.619 25.42 0.00 0.00 2.73
262 263 2.008752 TCATGCATGACACGTGGTAG 57.991 50.000 25.42 7.81 0.00 3.18
272 273 2.815503 CCTCACTTGTTGTCATGCATGA 59.184 45.455 25.42 25.42 0.00 3.07
273 274 2.555325 ACCTCACTTGTTGTCATGCATG 59.445 45.455 21.07 21.07 0.00 4.06
274 275 2.816087 GACCTCACTTGTTGTCATGCAT 59.184 45.455 0.00 0.00 0.00 3.96
275 276 2.158769 AGACCTCACTTGTTGTCATGCA 60.159 45.455 0.00 0.00 0.00 3.96
276 277 2.498167 AGACCTCACTTGTTGTCATGC 58.502 47.619 0.00 0.00 0.00 4.06
277 278 4.384056 AGAAGACCTCACTTGTTGTCATG 58.616 43.478 0.00 0.00 0.00 3.07
278 279 4.696479 AGAAGACCTCACTTGTTGTCAT 57.304 40.909 0.00 0.00 0.00 3.06
279 280 5.304357 TCATAGAAGACCTCACTTGTTGTCA 59.696 40.000 0.00 0.00 0.00 3.58
280 281 5.784177 TCATAGAAGACCTCACTTGTTGTC 58.216 41.667 0.00 0.00 0.00 3.18
281 282 5.808366 TCATAGAAGACCTCACTTGTTGT 57.192 39.130 0.00 0.00 0.00 3.32
282 283 6.758886 GGTATCATAGAAGACCTCACTTGTTG 59.241 42.308 0.00 0.00 0.00 3.33
283 284 6.440647 TGGTATCATAGAAGACCTCACTTGTT 59.559 38.462 0.00 0.00 32.87 2.83
284 285 5.958380 TGGTATCATAGAAGACCTCACTTGT 59.042 40.000 0.00 0.00 32.87 3.16
285 286 6.471233 TGGTATCATAGAAGACCTCACTTG 57.529 41.667 0.00 0.00 32.87 3.16
286 287 6.127026 GGTTGGTATCATAGAAGACCTCACTT 60.127 42.308 0.00 0.00 32.87 3.16
287 288 5.364157 GGTTGGTATCATAGAAGACCTCACT 59.636 44.000 0.00 0.00 32.87 3.41
288 289 5.364157 AGGTTGGTATCATAGAAGACCTCAC 59.636 44.000 0.00 0.00 30.85 3.51
289 290 5.529289 AGGTTGGTATCATAGAAGACCTCA 58.471 41.667 0.00 0.00 30.85 3.86
290 291 7.784470 ATAGGTTGGTATCATAGAAGACCTC 57.216 40.000 0.00 0.00 37.45 3.85
291 292 9.261035 CATATAGGTTGGTATCATAGAAGACCT 57.739 37.037 0.65 0.65 39.44 3.85
292 293 9.256228 TCATATAGGTTGGTATCATAGAAGACC 57.744 37.037 0.00 0.00 0.00 3.85
301 302 9.487442 TGCATAGTATCATATAGGTTGGTATCA 57.513 33.333 0.00 0.00 0.00 2.15
333 334 8.995220 GCGGTGGTTGAAAGTATCATATATTAA 58.005 33.333 0.00 0.00 38.03 1.40
334 335 7.329962 CGCGGTGGTTGAAAGTATCATATATTA 59.670 37.037 0.00 0.00 38.03 0.98
335 336 6.147164 CGCGGTGGTTGAAAGTATCATATATT 59.853 38.462 0.00 0.00 38.03 1.28
336 337 5.637810 CGCGGTGGTTGAAAGTATCATATAT 59.362 40.000 0.00 0.00 38.03 0.86
337 338 4.986034 CGCGGTGGTTGAAAGTATCATATA 59.014 41.667 0.00 0.00 38.03 0.86
338 339 3.807622 CGCGGTGGTTGAAAGTATCATAT 59.192 43.478 0.00 0.00 38.03 1.78
339 340 3.119065 TCGCGGTGGTTGAAAGTATCATA 60.119 43.478 6.13 0.00 38.03 2.15
340 341 2.006888 CGCGGTGGTTGAAAGTATCAT 58.993 47.619 0.00 0.00 38.03 2.45
341 342 1.001068 TCGCGGTGGTTGAAAGTATCA 59.999 47.619 6.13 0.00 35.85 2.15
342 343 1.659098 CTCGCGGTGGTTGAAAGTATC 59.341 52.381 6.13 0.00 0.00 2.24
343 344 1.722011 CTCGCGGTGGTTGAAAGTAT 58.278 50.000 6.13 0.00 0.00 2.12
344 345 0.947180 GCTCGCGGTGGTTGAAAGTA 60.947 55.000 6.13 0.00 0.00 2.24
345 346 2.251642 GCTCGCGGTGGTTGAAAGT 61.252 57.895 6.13 0.00 0.00 2.66
346 347 2.175184 CTGCTCGCGGTGGTTGAAAG 62.175 60.000 6.13 0.00 0.00 2.62
347 348 2.203084 TGCTCGCGGTGGTTGAAA 60.203 55.556 6.13 0.00 0.00 2.69
348 349 2.664851 CTGCTCGCGGTGGTTGAA 60.665 61.111 6.13 0.00 0.00 2.69
351 352 4.626081 AAGCTGCTCGCGGTGGTT 62.626 61.111 6.13 3.23 45.59 3.67
354 355 2.393768 AATCAAGCTGCTCGCGGTG 61.394 57.895 6.13 0.07 45.59 4.94
355 356 2.046892 AATCAAGCTGCTCGCGGT 60.047 55.556 6.13 0.00 45.59 5.68
356 357 2.033328 CTCAATCAAGCTGCTCGCGG 62.033 60.000 6.13 0.00 45.59 6.46
357 358 1.347564 CTCAATCAAGCTGCTCGCG 59.652 57.895 1.00 0.00 45.59 5.87
358 359 1.062206 GCTCAATCAAGCTGCTCGC 59.938 57.895 1.00 0.00 39.27 5.03
359 360 0.096628 GTGCTCAATCAAGCTGCTCG 59.903 55.000 1.00 0.00 42.94 5.03
360 361 1.451067 AGTGCTCAATCAAGCTGCTC 58.549 50.000 1.00 0.00 42.94 4.26
361 362 2.289882 TGTAGTGCTCAATCAAGCTGCT 60.290 45.455 0.00 0.00 42.94 4.24
362 363 2.079158 TGTAGTGCTCAATCAAGCTGC 58.921 47.619 0.00 0.00 42.94 5.25
363 364 4.906423 GATTGTAGTGCTCAATCAAGCTG 58.094 43.478 11.96 0.00 45.80 4.24
369 370 5.091431 GCAAGTTGATTGTAGTGCTCAATC 58.909 41.667 7.16 10.48 46.33 2.67
370 371 4.520111 TGCAAGTTGATTGTAGTGCTCAAT 59.480 37.500 7.16 0.00 41.29 2.57
371 372 3.882288 TGCAAGTTGATTGTAGTGCTCAA 59.118 39.130 7.16 0.00 41.29 3.02
372 373 3.475575 TGCAAGTTGATTGTAGTGCTCA 58.524 40.909 7.16 0.00 41.29 4.26
373 374 4.409570 CATGCAAGTTGATTGTAGTGCTC 58.590 43.478 7.16 0.00 41.29 4.26
374 375 3.366679 GCATGCAAGTTGATTGTAGTGCT 60.367 43.478 14.21 0.00 41.29 4.40
375 376 2.919229 GCATGCAAGTTGATTGTAGTGC 59.081 45.455 14.21 1.92 41.29 4.40
376 377 4.430137 AGCATGCAAGTTGATTGTAGTG 57.570 40.909 21.98 0.00 41.29 2.74
377 378 5.458041 AAAGCATGCAAGTTGATTGTAGT 57.542 34.783 21.98 0.00 41.29 2.73
378 379 6.845302 TCTAAAGCATGCAAGTTGATTGTAG 58.155 36.000 21.98 5.36 41.29 2.74
379 380 6.816134 TCTAAAGCATGCAAGTTGATTGTA 57.184 33.333 21.98 0.00 41.29 2.41
380 381 5.710513 TCTAAAGCATGCAAGTTGATTGT 57.289 34.783 21.98 0.00 41.29 2.71
381 382 8.752254 CATATTCTAAAGCATGCAAGTTGATTG 58.248 33.333 21.98 4.11 42.20 2.67
382 383 8.689061 TCATATTCTAAAGCATGCAAGTTGATT 58.311 29.630 21.98 9.28 0.00 2.57
383 384 8.229253 TCATATTCTAAAGCATGCAAGTTGAT 57.771 30.769 21.98 9.38 0.00 2.57
384 385 7.628769 TCATATTCTAAAGCATGCAAGTTGA 57.371 32.000 21.98 7.82 0.00 3.18
385 386 7.434307 CCTTCATATTCTAAAGCATGCAAGTTG 59.566 37.037 21.98 5.47 0.00 3.16
386 387 7.340232 TCCTTCATATTCTAAAGCATGCAAGTT 59.660 33.333 21.98 13.07 0.00 2.66
387 388 6.830324 TCCTTCATATTCTAAAGCATGCAAGT 59.170 34.615 21.98 6.75 0.00 3.16
388 389 7.137426 GTCCTTCATATTCTAAAGCATGCAAG 58.863 38.462 21.98 13.99 0.00 4.01
389 390 6.039717 GGTCCTTCATATTCTAAAGCATGCAA 59.960 38.462 21.98 5.01 0.00 4.08
390 391 5.532406 GGTCCTTCATATTCTAAAGCATGCA 59.468 40.000 21.98 0.00 0.00 3.96
391 392 5.334414 CGGTCCTTCATATTCTAAAGCATGC 60.334 44.000 10.51 10.51 0.00 4.06
392 393 5.991606 TCGGTCCTTCATATTCTAAAGCATG 59.008 40.000 0.00 0.00 0.00 4.06
393 394 6.174720 TCGGTCCTTCATATTCTAAAGCAT 57.825 37.500 0.00 0.00 0.00 3.79
394 395 5.128827 ACTCGGTCCTTCATATTCTAAAGCA 59.871 40.000 0.00 0.00 0.00 3.91
395 396 5.602628 ACTCGGTCCTTCATATTCTAAAGC 58.397 41.667 0.00 0.00 0.00 3.51
396 397 9.765795 ATTTACTCGGTCCTTCATATTCTAAAG 57.234 33.333 0.00 0.00 0.00 1.85
399 400 9.584008 AGTATTTACTCGGTCCTTCATATTCTA 57.416 33.333 0.00 0.00 0.00 2.10
400 401 8.480133 AGTATTTACTCGGTCCTTCATATTCT 57.520 34.615 0.00 0.00 0.00 2.40
405 406 8.925338 AGATTTAGTATTTACTCGGTCCTTCAT 58.075 33.333 0.00 0.00 37.73 2.57
406 407 8.195436 CAGATTTAGTATTTACTCGGTCCTTCA 58.805 37.037 0.00 0.00 37.73 3.02
407 408 8.196103 ACAGATTTAGTATTTACTCGGTCCTTC 58.804 37.037 0.00 0.00 37.73 3.46
408 409 8.075761 ACAGATTTAGTATTTACTCGGTCCTT 57.924 34.615 0.00 0.00 37.73 3.36
409 410 7.657023 ACAGATTTAGTATTTACTCGGTCCT 57.343 36.000 0.00 0.00 37.73 3.85
410 411 7.864882 GGTACAGATTTAGTATTTACTCGGTCC 59.135 40.741 0.00 0.00 37.73 4.46
411 412 7.589221 CGGTACAGATTTAGTATTTACTCGGTC 59.411 40.741 0.00 0.00 37.73 4.79
412 413 7.420800 CGGTACAGATTTAGTATTTACTCGGT 58.579 38.462 0.00 0.00 37.73 4.69
413 414 6.860023 CCGGTACAGATTTAGTATTTACTCGG 59.140 42.308 0.00 0.00 37.73 4.63
414 415 7.642669 TCCGGTACAGATTTAGTATTTACTCG 58.357 38.462 0.00 0.00 37.73 4.18
415 416 9.623350 GATCCGGTACAGATTTAGTATTTACTC 57.377 37.037 0.00 0.00 37.73 2.59
416 417 8.583296 GGATCCGGTACAGATTTAGTATTTACT 58.417 37.037 0.00 0.00 40.24 2.24
417 418 8.583296 AGGATCCGGTACAGATTTAGTATTTAC 58.417 37.037 5.98 0.00 0.00 2.01
418 419 8.716674 AGGATCCGGTACAGATTTAGTATTTA 57.283 34.615 5.98 0.00 0.00 1.40
419 420 7.613551 AGGATCCGGTACAGATTTAGTATTT 57.386 36.000 5.98 0.00 0.00 1.40
420 421 7.613551 AAGGATCCGGTACAGATTTAGTATT 57.386 36.000 5.98 0.00 0.00 1.89
421 422 8.716674 TTAAGGATCCGGTACAGATTTAGTAT 57.283 34.615 5.98 0.00 0.00 2.12
422 423 8.716674 ATTAAGGATCCGGTACAGATTTAGTA 57.283 34.615 5.98 0.00 0.00 1.82
423 424 7.509659 AGATTAAGGATCCGGTACAGATTTAGT 59.490 37.037 5.98 0.00 35.21 2.24
424 425 7.897864 AGATTAAGGATCCGGTACAGATTTAG 58.102 38.462 5.98 0.00 35.21 1.85
425 426 7.850935 AGATTAAGGATCCGGTACAGATTTA 57.149 36.000 5.98 0.00 35.21 1.40
426 427 6.749036 AGATTAAGGATCCGGTACAGATTT 57.251 37.500 5.98 0.00 35.21 2.17
427 428 6.749036 AAGATTAAGGATCCGGTACAGATT 57.251 37.500 5.98 0.00 35.21 2.40
428 429 6.525629 CAAAGATTAAGGATCCGGTACAGAT 58.474 40.000 5.98 0.00 35.21 2.90
429 430 5.684030 GCAAAGATTAAGGATCCGGTACAGA 60.684 44.000 5.98 0.00 35.21 3.41
430 431 4.511826 GCAAAGATTAAGGATCCGGTACAG 59.488 45.833 5.98 0.00 35.21 2.74
431 432 4.080807 TGCAAAGATTAAGGATCCGGTACA 60.081 41.667 5.98 0.00 35.21 2.90
432 433 4.448210 TGCAAAGATTAAGGATCCGGTAC 58.552 43.478 5.98 0.00 35.21 3.34
433 434 4.764050 TGCAAAGATTAAGGATCCGGTA 57.236 40.909 5.98 0.00 35.21 4.02
434 435 3.644966 TGCAAAGATTAAGGATCCGGT 57.355 42.857 5.98 0.63 35.21 5.28
435 436 6.633500 TTATTGCAAAGATTAAGGATCCGG 57.367 37.500 1.71 0.00 35.21 5.14
436 437 6.638468 GCTTTATTGCAAAGATTAAGGATCCG 59.362 38.462 1.71 0.00 35.21 4.18
437 438 7.650903 CAGCTTTATTGCAAAGATTAAGGATCC 59.349 37.037 1.71 2.48 33.60 3.36
438 439 7.650903 CCAGCTTTATTGCAAAGATTAAGGATC 59.349 37.037 1.71 0.00 34.99 3.36
439 440 7.124750 ACCAGCTTTATTGCAAAGATTAAGGAT 59.875 33.333 1.71 0.00 34.99 3.24
440 441 6.437162 ACCAGCTTTATTGCAAAGATTAAGGA 59.563 34.615 1.71 0.00 34.99 3.36
441 442 6.633856 ACCAGCTTTATTGCAAAGATTAAGG 58.366 36.000 1.71 4.21 34.99 2.69
442 443 7.315142 TGACCAGCTTTATTGCAAAGATTAAG 58.685 34.615 1.71 4.30 34.99 1.85
443 444 7.225784 TGACCAGCTTTATTGCAAAGATTAA 57.774 32.000 1.71 0.00 34.99 1.40
444 445 6.832520 TGACCAGCTTTATTGCAAAGATTA 57.167 33.333 1.71 0.00 34.99 1.75
445 446 5.726980 TGACCAGCTTTATTGCAAAGATT 57.273 34.783 1.71 0.00 34.99 2.40
446 447 5.927281 ATGACCAGCTTTATTGCAAAGAT 57.073 34.783 1.71 0.00 34.99 2.40
447 448 6.832520 TTATGACCAGCTTTATTGCAAAGA 57.167 33.333 1.71 0.00 34.99 2.52
448 449 6.035327 GCTTTATGACCAGCTTTATTGCAAAG 59.965 38.462 1.71 0.00 32.87 2.77
449 450 5.868801 GCTTTATGACCAGCTTTATTGCAAA 59.131 36.000 1.71 0.00 32.87 3.68
450 451 5.185635 AGCTTTATGACCAGCTTTATTGCAA 59.814 36.000 0.00 0.00 44.28 4.08
451 452 4.706476 AGCTTTATGACCAGCTTTATTGCA 59.294 37.500 0.00 0.00 44.28 4.08
452 453 5.254339 AGCTTTATGACCAGCTTTATTGC 57.746 39.130 0.00 0.00 44.28 3.56
460 461 5.643777 TGTAGAAAGAAGCTTTATGACCAGC 59.356 40.000 0.00 0.00 36.16 4.85
461 462 7.099764 TCTGTAGAAAGAAGCTTTATGACCAG 58.900 38.462 0.00 2.72 0.00 4.00
462 463 7.004555 TCTGTAGAAAGAAGCTTTATGACCA 57.995 36.000 0.00 0.00 0.00 4.02
463 464 9.601217 TTATCTGTAGAAAGAAGCTTTATGACC 57.399 33.333 0.00 0.00 0.00 4.02
506 507 5.695851 TCAAAAAGAGACTTCAATCCTGC 57.304 39.130 0.00 0.00 0.00 4.85
532 533 6.877611 AAACATGACGGATTAGTTCACTTT 57.122 33.333 0.00 0.00 0.00 2.66
537 538 5.873164 ACACCTAAACATGACGGATTAGTTC 59.127 40.000 0.00 0.00 0.00 3.01
542 543 3.263425 AGGACACCTAAACATGACGGATT 59.737 43.478 0.00 0.00 28.47 3.01
550 551 3.189606 TGGATGGAGGACACCTAAACAT 58.810 45.455 0.00 0.00 31.76 2.71
554 555 6.590656 AAATTATGGATGGAGGACACCTAA 57.409 37.500 0.00 0.00 31.76 2.69
581 582 5.263872 ACCCCATAACCAAGTTGACATAA 57.736 39.130 3.87 0.00 0.00 1.90
599 600 1.182667 GTATGCCAGTCCAAAACCCC 58.817 55.000 0.00 0.00 0.00 4.95
639 640 7.175293 GGATCTCAGATTTACGATGTAGTAGGT 59.825 40.741 0.00 0.00 0.00 3.08
641 642 8.100508 TGGATCTCAGATTTACGATGTAGTAG 57.899 38.462 0.00 0.00 0.00 2.57
642 643 8.515414 CATGGATCTCAGATTTACGATGTAGTA 58.485 37.037 0.00 0.00 0.00 1.82
645 646 7.448469 TCTCATGGATCTCAGATTTACGATGTA 59.552 37.037 0.00 0.00 0.00 2.29
647 648 6.685657 TCTCATGGATCTCAGATTTACGATG 58.314 40.000 0.00 0.00 0.00 3.84
654 655 2.299582 CCGCTCTCATGGATCTCAGATT 59.700 50.000 0.00 0.00 0.00 2.40
657 658 1.039068 ACCGCTCTCATGGATCTCAG 58.961 55.000 0.00 0.00 0.00 3.35
663 664 4.470602 TCTATCTTAACCGCTCTCATGGA 58.529 43.478 0.00 0.00 0.00 3.41
675 680 7.547370 GGATCCAGTGTATGCATCTATCTTAAC 59.453 40.741 6.95 0.00 0.00 2.01
677 682 6.155221 GGGATCCAGTGTATGCATCTATCTTA 59.845 42.308 15.23 0.00 0.00 2.10
696 701 2.747799 GCACAAGAGGAATGAGGGATCC 60.748 54.545 1.92 1.92 35.88 3.36
753 759 9.583756 AGCAAAGCTACAATACAGAACAACTGC 62.584 40.741 0.00 0.00 43.14 4.40
754 760 6.293626 AGCAAAGCTACAATACAGAACAACTG 60.294 38.462 0.00 0.00 44.14 3.16
755 761 5.765182 AGCAAAGCTACAATACAGAACAACT 59.235 36.000 0.00 0.00 36.99 3.16
756 762 6.002062 AGCAAAGCTACAATACAGAACAAC 57.998 37.500 0.00 0.00 36.99 3.32
770 776 2.432874 TCGGCTTATGGTAGCAAAGCTA 59.567 45.455 26.15 18.13 44.00 3.32
771 777 1.209504 TCGGCTTATGGTAGCAAAGCT 59.790 47.619 26.15 6.44 44.00 3.74
801 825 2.968574 GCTGACCTCCCTGATATGAAGA 59.031 50.000 0.00 0.00 0.00 2.87
822 846 6.868622 ACTTACCTATGACTGAACAAGCTAG 58.131 40.000 0.00 0.00 0.00 3.42
824 848 5.746990 ACTTACCTATGACTGAACAAGCT 57.253 39.130 0.00 0.00 0.00 3.74
825 849 7.764443 TGAATACTTACCTATGACTGAACAAGC 59.236 37.037 0.00 0.00 0.00 4.01
838 872 7.811236 GCGTGCTAATGTATGAATACTTACCTA 59.189 37.037 2.36 0.00 34.41 3.08
866 912 7.845617 TGTCGCAACATATAAAGTTTCAAAC 57.154 32.000 0.00 0.00 0.00 2.93
945 1008 1.687612 CTCCAGCTCCACCCATTGT 59.312 57.895 0.00 0.00 0.00 2.71
987 1050 2.558359 CCCACTCATTCCAAAGTTCCAC 59.442 50.000 0.00 0.00 0.00 4.02
995 1058 2.561187 TGGATCTCCCACTCATTCCAA 58.439 47.619 0.00 0.00 40.82 3.53
1082 1145 3.660501 TTCAGAGCAAAAGAGACGCTA 57.339 42.857 0.00 0.00 35.75 4.26
1100 1163 1.202940 ACCAACCAGAGAAGGGCTTTC 60.203 52.381 0.32 0.32 35.97 2.62
1103 1166 1.972588 ATACCAACCAGAGAAGGGCT 58.027 50.000 0.00 0.00 0.00 5.19
1116 1179 4.776349 ACATCGGCAAACAGATATACCAA 58.224 39.130 0.00 0.00 0.00 3.67
1160 1223 1.328279 ACAGTGACGAGGACATGTGA 58.672 50.000 1.15 0.00 0.00 3.58
1176 1239 0.865769 CCGGACGGTTTCTTCAACAG 59.134 55.000 0.00 0.00 37.07 3.16
1180 1243 2.356553 CGCCGGACGGTTTCTTCA 60.357 61.111 5.05 0.00 38.44 3.02
1275 1338 2.553028 GCCAGAGTTCATTGTCCTCCAA 60.553 50.000 0.00 0.00 37.49 3.53
1362 1425 3.597728 GGTTGCCCCGTTTGCGAA 61.598 61.111 0.00 0.00 41.33 4.70
1368 1431 1.830847 GGACAAAGGTTGCCCCGTT 60.831 57.895 0.00 0.00 38.74 4.44
1369 1432 2.203437 GGACAAAGGTTGCCCCGT 60.203 61.111 0.00 0.00 38.74 5.28
1428 1491 0.760567 AGTGCCCATATCCTCTCGCA 60.761 55.000 0.00 0.00 0.00 5.10
1454 1517 1.967535 GGAACCCTTCTTGCTTGCC 59.032 57.895 0.00 0.00 0.00 4.52
1478 1541 2.106338 TCTGTTCAACTCTGGCATTCCA 59.894 45.455 0.00 0.00 40.85 3.53
1483 1546 2.485479 GGAAGTCTGTTCAACTCTGGCA 60.485 50.000 0.00 0.00 0.00 4.92
1488 1560 3.810386 GGTTCAGGAAGTCTGTTCAACTC 59.190 47.826 0.00 0.00 43.76 3.01
1489 1561 3.456277 AGGTTCAGGAAGTCTGTTCAACT 59.544 43.478 0.00 0.00 43.76 3.16
1490 1562 3.561725 CAGGTTCAGGAAGTCTGTTCAAC 59.438 47.826 0.00 0.00 43.76 3.18
1493 1565 3.477210 ACAGGTTCAGGAAGTCTGTTC 57.523 47.619 10.37 0.00 43.76 3.18
1543 1921 7.232300 GCTTTTCGTAATAAATATCCCTACGC 58.768 38.462 0.00 0.00 36.25 4.42
1544 1922 7.442657 CGCTTTTCGTAATAAATATCCCTACG 58.557 38.462 0.00 0.00 37.33 3.51
1561 1939 1.017701 GGACCCACCTACGCTTTTCG 61.018 60.000 0.00 0.00 38.87 3.46
1562 1940 1.017701 CGGACCCACCTACGCTTTTC 61.018 60.000 0.00 0.00 36.31 2.29
1563 1941 1.004200 CGGACCCACCTACGCTTTT 60.004 57.895 0.00 0.00 36.31 2.27
1564 1942 2.660802 CGGACCCACCTACGCTTT 59.339 61.111 0.00 0.00 36.31 3.51
1568 1946 0.675522 ATTTTGCGGACCCACCTACG 60.676 55.000 0.00 0.00 36.31 3.51
1569 1947 2.011947 GTATTTTGCGGACCCACCTAC 58.988 52.381 0.00 0.00 36.31 3.18
1570 1948 1.065272 GGTATTTTGCGGACCCACCTA 60.065 52.381 0.00 0.00 36.31 3.08
1571 1949 0.323087 GGTATTTTGCGGACCCACCT 60.323 55.000 0.00 0.00 36.31 4.00
1572 1950 0.323087 AGGTATTTTGCGGACCCACC 60.323 55.000 0.00 0.00 33.40 4.61
1573 1951 1.201414 CAAGGTATTTTGCGGACCCAC 59.799 52.381 0.00 0.00 33.40 4.61
1574 1952 1.540267 CAAGGTATTTTGCGGACCCA 58.460 50.000 0.00 0.00 33.40 4.51
1575 1953 0.172578 GCAAGGTATTTTGCGGACCC 59.827 55.000 0.00 0.00 43.36 4.46
1576 1954 3.713936 GCAAGGTATTTTGCGGACC 57.286 52.632 0.00 0.00 43.36 4.46
1589 1967 0.251297 TGGATGAACCACCAGCAAGG 60.251 55.000 0.00 0.00 44.64 3.61
1590 1968 3.344703 TGGATGAACCACCAGCAAG 57.655 52.632 0.00 0.00 44.64 4.01
1605 1983 5.652994 AGTTGTAAGCTGTTTGTTTTGGA 57.347 34.783 0.00 0.00 0.00 3.53
1641 2019 1.661178 GCAACTTGTGTGCTGTCATCG 60.661 52.381 0.00 0.00 0.00 3.84
1662 2040 7.395772 TGATTAAAGGCTTCACAAATACATCCA 59.604 33.333 0.00 0.00 0.00 3.41
1675 2053 7.716998 TCATTCCTGTCTATGATTAAAGGCTTC 59.283 37.037 0.00 0.00 0.00 3.86
1717 2095 2.807676 AGTTCAGTTATTTGCCCCCTG 58.192 47.619 0.00 0.00 0.00 4.45
1728 2106 7.027760 CGCATGACTCTTTAGTAGTTCAGTTA 58.972 38.462 0.00 0.00 35.56 2.24
1759 2152 2.344203 ACCTTCGCTCTCGTCAGGG 61.344 63.158 9.32 0.00 39.75 4.45
1760 2153 1.153939 CACCTTCGCTCTCGTCAGG 60.154 63.158 0.00 0.00 40.61 3.86
1813 2212 3.683847 GCTCCACCTCTATTGTCTTGCAT 60.684 47.826 0.00 0.00 0.00 3.96
1932 2367 3.588277 GTGAAGACCACAAGAGCGA 57.412 52.632 0.00 0.00 45.03 4.93
2080 2519 4.122046 GCAAAAACCATCTGCTGTTTCTT 58.878 39.130 0.00 0.00 33.76 2.52
2127 2569 4.543689 TCCATCCTTGACGAGGTAGTAAT 58.456 43.478 8.69 0.00 46.39 1.89
2166 2614 7.502561 AGAAGGATATCAAGTTAAATTTCCCGG 59.497 37.037 4.83 0.00 0.00 5.73
2253 2701 2.946762 GAGCTTTGTCCCACACGC 59.053 61.111 0.00 0.00 0.00 5.34
2425 2876 2.234661 ACAACTCATGCTCCAATCGAGA 59.765 45.455 0.00 0.00 41.63 4.04
2494 2945 0.037326 TGACGTCAGGGTGATTGAGC 60.037 55.000 15.76 0.00 0.00 4.26
2747 3234 4.959723 TCAGCGGAATCATATGTGAATGA 58.040 39.130 1.90 0.00 40.07 2.57
3011 3567 1.892209 ACTTTGACCGGCTTTGGTAG 58.108 50.000 0.00 0.00 44.01 3.18
3038 3594 1.595993 GCACTAGCCTCGACAGTCCA 61.596 60.000 0.00 0.00 33.58 4.02
3197 3766 4.300189 TGGAGTTACAAATGCAACACAC 57.700 40.909 0.00 0.00 0.00 3.82
3377 3949 1.884926 GCCGAGGGAGAAGCAATCG 60.885 63.158 0.00 0.00 0.00 3.34
3435 4007 6.093495 CAGAAACTGGAGTTTGACAGTACAAA 59.907 38.462 9.49 0.00 46.49 2.83
3538 4110 8.088981 TCTTGGCGGTTTGCTTTATTTATAAAA 58.911 29.630 1.21 0.00 45.43 1.52
3840 4425 1.970640 TCTGGTTACTTGCAGCTCTGA 59.029 47.619 0.29 0.00 0.00 3.27
3923 4508 0.537188 ATGGACGCTCTGGACGATTT 59.463 50.000 0.00 0.00 0.00 2.17
3989 4574 1.985116 GCCGAACTCCAGACCTCCT 60.985 63.158 0.00 0.00 0.00 3.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.