Multiple sequence alignment - TraesCS7B01G440200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G440200 chr7B 100.000 2426 0 0 1 2426 705830155 705832580 0.000000e+00 4481.0
1 TraesCS7B01G440200 chr7B 87.415 294 21 4 2110 2388 705816249 705815957 8.370000e-85 324.0
2 TraesCS7B01G440200 chr3B 97.649 808 18 1 789 1596 656603083 656602277 0.000000e+00 1386.0
3 TraesCS7B01G440200 chr3B 93.647 787 48 2 814 1599 465042702 465041917 0.000000e+00 1175.0
4 TraesCS7B01G440200 chr3B 90.932 805 64 4 1 799 465044486 465043685 0.000000e+00 1074.0
5 TraesCS7B01G440200 chr3B 82.798 529 49 23 1595 2109 771415486 771414986 3.700000e-118 435.0
6 TraesCS7B01G440200 chr3A 95.755 801 34 0 1 801 598918485 598919285 0.000000e+00 1291.0
7 TraesCS7B01G440200 chr5A 95.755 801 31 1 1 801 634172365 634171568 0.000000e+00 1288.0
8 TraesCS7B01G440200 chr5A 95.415 807 36 1 789 1595 634170438 634169633 0.000000e+00 1284.0
9 TraesCS7B01G440200 chr5A 93.860 798 44 4 1 796 452241963 452242757 0.000000e+00 1197.0
10 TraesCS7B01G440200 chr5A 92.063 63 2 3 1595 1656 701347816 701347756 4.300000e-13 86.1
11 TraesCS7B01G440200 chr7A 93.836 795 45 3 808 1599 287613569 287614362 0.000000e+00 1194.0
12 TraesCS7B01G440200 chr7A 93.225 797 50 3 1 796 207882275 207883068 0.000000e+00 1170.0
13 TraesCS7B01G440200 chr7A 92.191 794 53 3 1 787 287611781 287612572 0.000000e+00 1114.0
14 TraesCS7B01G440200 chr2B 93.909 788 46 2 813 1599 25339574 25338788 0.000000e+00 1188.0
15 TraesCS7B01G440200 chr2B 93.585 795 47 3 808 1599 457195106 457195899 0.000000e+00 1182.0
16 TraesCS7B01G440200 chr2B 92.060 806 57 3 1 801 457193320 457194123 0.000000e+00 1127.0
17 TraesCS7B01G440200 chr1B 93.459 795 48 3 808 1599 573062527 573063320 0.000000e+00 1177.0
18 TraesCS7B01G440200 chr1B 93.459 795 48 3 808 1599 573067163 573067956 0.000000e+00 1177.0
19 TraesCS7B01G440200 chr1B 76.842 190 35 8 2144 2328 503311214 503311399 5.520000e-17 99.0
20 TraesCS7B01G440200 chr2A 93.333 795 48 4 808 1599 748228488 748229280 0.000000e+00 1170.0
21 TraesCS7B01G440200 chr2A 92.768 802 53 3 1 799 728782165 728781366 0.000000e+00 1155.0
22 TraesCS7B01G440200 chr2A 75.839 149 35 1 2159 2306 466759634 466759486 9.300000e-10 75.0
23 TraesCS7B01G440200 chr4B 88.104 807 56 23 1 803 498931771 498932541 0.000000e+00 922.0
24 TraesCS7B01G440200 chr4B 87.815 476 47 9 1635 2109 5188772 5188307 4.560000e-152 547.0
25 TraesCS7B01G440200 chr4B 100.000 41 0 0 2386 2426 369937091 369937051 2.590000e-10 76.8
26 TraesCS7B01G440200 chr6B 86.250 800 102 5 11 806 485535167 485534372 0.000000e+00 861.0
27 TraesCS7B01G440200 chr6B 85.130 807 110 8 1 803 100715989 100716789 0.000000e+00 817.0
28 TraesCS7B01G440200 chr6B 85.006 807 111 7 1 803 100750640 100751440 0.000000e+00 811.0
29 TraesCS7B01G440200 chr6B 86.895 496 50 10 1632 2112 22406577 22407072 2.120000e-150 542.0
30 TraesCS7B01G440200 chr6B 79.394 165 33 1 2144 2307 32200581 32200745 5.480000e-22 115.0
31 TraesCS7B01G440200 chr5B 86.358 799 97 8 11 803 565832575 565833367 0.000000e+00 861.0
32 TraesCS7B01G440200 chr5B 86.358 799 97 8 11 803 565905179 565905971 0.000000e+00 861.0
33 TraesCS7B01G440200 chr5B 98.387 62 1 0 1595 1656 545982603 545982664 2.550000e-20 110.0
34 TraesCS7B01G440200 chr5B 92.063 63 2 3 1595 1656 617500384 617500324 4.300000e-13 86.1
35 TraesCS7B01G440200 chr2D 86.358 799 97 8 11 803 642015546 642016338 0.000000e+00 861.0
36 TraesCS7B01G440200 chr2D 96.364 55 0 2 1595 1649 10851850 10851798 3.320000e-14 89.8
37 TraesCS7B01G440200 chr2D 96.364 55 0 2 1595 1649 22134770 22134718 3.320000e-14 89.8
38 TraesCS7B01G440200 chr2D 96.364 55 0 2 1595 1649 85960125 85960073 3.320000e-14 89.8
39 TraesCS7B01G440200 chr2D 96.364 55 0 2 1595 1649 531146467 531146415 3.320000e-14 89.8
40 TraesCS7B01G440200 chr2D 96.364 55 0 2 1595 1649 636682194 636682246 3.320000e-14 89.8
41 TraesCS7B01G440200 chr1A 85.965 798 106 4 11 806 518796536 518795743 0.000000e+00 848.0
42 TraesCS7B01G440200 chr1A 85.714 798 108 4 11 806 18496264 18495471 0.000000e+00 837.0
43 TraesCS7B01G440200 chr1A 79.898 786 134 23 11 788 534853483 534852714 2.730000e-154 555.0
44 TraesCS7B01G440200 chr1A 92.331 326 22 2 1 325 34160242 34159919 6.110000e-126 460.0
45 TraesCS7B01G440200 chr1A 91.837 294 20 3 34 325 34161212 34161503 8.080000e-110 407.0
46 TraesCS7B01G440200 chr6D 85.171 789 111 4 10 796 156257476 156256692 0.000000e+00 804.0
47 TraesCS7B01G440200 chr6D 89.384 471 39 6 1640 2109 12578536 12578996 1.250000e-162 582.0
48 TraesCS7B01G440200 chr6D 100.000 40 0 0 2387 2426 22145249 22145210 9.300000e-10 75.0
49 TraesCS7B01G440200 chr6D 100.000 40 0 0 2387 2426 144592251 144592212 9.300000e-10 75.0
50 TraesCS7B01G440200 chr6A 87.072 642 73 7 11 648 607378680 607379315 0.000000e+00 717.0
51 TraesCS7B01G440200 chr3D 90.506 474 33 8 1639 2110 567695262 567695725 1.230000e-172 616.0
52 TraesCS7B01G440200 chr3D 86.842 494 57 6 314 803 432089652 432090141 1.640000e-151 545.0
53 TraesCS7B01G440200 chr3D 86.983 484 50 12 1628 2111 607867359 607867829 1.280000e-147 532.0
54 TraesCS7B01G440200 chr3D 92.035 113 9 0 687 799 274982491 274982379 2.500000e-35 159.0
55 TraesCS7B01G440200 chr3D 78.676 136 28 1 2159 2293 364700067 364699932 3.320000e-14 89.8
56 TraesCS7B01G440200 chr7D 87.371 483 46 10 1632 2112 625142406 625142875 7.630000e-150 540.0
57 TraesCS7B01G440200 chr4D 88.889 450 34 5 357 803 402828134 402828570 7.630000e-150 540.0
58 TraesCS7B01G440200 chr4D 91.436 362 28 2 1 361 402826215 402826574 6.030000e-136 494.0
59 TraesCS7B01G440200 chrUn 87.526 473 50 5 1632 2104 87357413 87357876 2.740000e-149 538.0
60 TraesCS7B01G440200 chrUn 87.265 479 51 8 1632 2110 303691506 303691974 2.740000e-149 538.0
61 TraesCS7B01G440200 chrUn 100.000 40 0 0 2387 2426 35549815 35549854 9.300000e-10 75.0
62 TraesCS7B01G440200 chrUn 100.000 40 0 0 2387 2426 39243382 39243421 9.300000e-10 75.0
63 TraesCS7B01G440200 chrUn 100.000 40 0 0 2387 2426 60467099 60467060 9.300000e-10 75.0
64 TraesCS7B01G440200 chrUn 100.000 40 0 0 2387 2426 119851676 119851637 9.300000e-10 75.0
65 TraesCS7B01G440200 chrUn 100.000 40 0 0 2387 2426 205772201 205772240 9.300000e-10 75.0
66 TraesCS7B01G440200 chrUn 100.000 40 0 0 2387 2426 293675817 293675778 9.300000e-10 75.0
67 TraesCS7B01G440200 chrUn 100.000 40 0 0 2387 2426 340941653 340941692 9.300000e-10 75.0
68 TraesCS7B01G440200 chrUn 97.500 40 1 0 2387 2426 168680070 168680031 4.330000e-08 69.4
69 TraesCS7B01G440200 chrUn 97.500 40 1 0 2387 2426 202825155 202825116 4.330000e-08 69.4
70 TraesCS7B01G440200 chr1D 86.983 484 50 9 1629 2110 3346078 3346550 1.280000e-147 532.0
71 TraesCS7B01G440200 chr5D 79.540 391 72 7 11 399 50621623 50621239 3.070000e-69 272.0
72 TraesCS7B01G440200 chr4A 81.319 182 31 3 2144 2323 639163415 639163235 6.990000e-31 145.0
73 TraesCS7B01G440200 chr4A 76.190 189 38 6 2144 2328 652872811 652872626 2.570000e-15 93.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G440200 chr7B 705830155 705832580 2425 False 4481.0 4481 100.0000 1 2426 1 chr7B.!!$F1 2425
1 TraesCS7B01G440200 chr3B 656602277 656603083 806 True 1386.0 1386 97.6490 789 1596 1 chr3B.!!$R1 807
2 TraesCS7B01G440200 chr3B 465041917 465044486 2569 True 1124.5 1175 92.2895 1 1599 2 chr3B.!!$R3 1598
3 TraesCS7B01G440200 chr3B 771414986 771415486 500 True 435.0 435 82.7980 1595 2109 1 chr3B.!!$R2 514
4 TraesCS7B01G440200 chr3A 598918485 598919285 800 False 1291.0 1291 95.7550 1 801 1 chr3A.!!$F1 800
5 TraesCS7B01G440200 chr5A 634169633 634172365 2732 True 1286.0 1288 95.5850 1 1595 2 chr5A.!!$R2 1594
6 TraesCS7B01G440200 chr5A 452241963 452242757 794 False 1197.0 1197 93.8600 1 796 1 chr5A.!!$F1 795
7 TraesCS7B01G440200 chr7A 207882275 207883068 793 False 1170.0 1170 93.2250 1 796 1 chr7A.!!$F1 795
8 TraesCS7B01G440200 chr7A 287611781 287614362 2581 False 1154.0 1194 93.0135 1 1599 2 chr7A.!!$F2 1598
9 TraesCS7B01G440200 chr2B 25338788 25339574 786 True 1188.0 1188 93.9090 813 1599 1 chr2B.!!$R1 786
10 TraesCS7B01G440200 chr2B 457193320 457195899 2579 False 1154.5 1182 92.8225 1 1599 2 chr2B.!!$F1 1598
11 TraesCS7B01G440200 chr1B 573062527 573067956 5429 False 1177.0 1177 93.4590 808 1599 2 chr1B.!!$F2 791
12 TraesCS7B01G440200 chr2A 748228488 748229280 792 False 1170.0 1170 93.3330 808 1599 1 chr2A.!!$F1 791
13 TraesCS7B01G440200 chr2A 728781366 728782165 799 True 1155.0 1155 92.7680 1 799 1 chr2A.!!$R2 798
14 TraesCS7B01G440200 chr4B 498931771 498932541 770 False 922.0 922 88.1040 1 803 1 chr4B.!!$F1 802
15 TraesCS7B01G440200 chr6B 485534372 485535167 795 True 861.0 861 86.2500 11 806 1 chr6B.!!$R1 795
16 TraesCS7B01G440200 chr6B 100715989 100716789 800 False 817.0 817 85.1300 1 803 1 chr6B.!!$F3 802
17 TraesCS7B01G440200 chr6B 100750640 100751440 800 False 811.0 811 85.0060 1 803 1 chr6B.!!$F4 802
18 TraesCS7B01G440200 chr5B 565832575 565833367 792 False 861.0 861 86.3580 11 803 1 chr5B.!!$F2 792
19 TraesCS7B01G440200 chr5B 565905179 565905971 792 False 861.0 861 86.3580 11 803 1 chr5B.!!$F3 792
20 TraesCS7B01G440200 chr2D 642015546 642016338 792 False 861.0 861 86.3580 11 803 1 chr2D.!!$F2 792
21 TraesCS7B01G440200 chr1A 518795743 518796536 793 True 848.0 848 85.9650 11 806 1 chr1A.!!$R3 795
22 TraesCS7B01G440200 chr1A 18495471 18496264 793 True 837.0 837 85.7140 11 806 1 chr1A.!!$R1 795
23 TraesCS7B01G440200 chr1A 534852714 534853483 769 True 555.0 555 79.8980 11 788 1 chr1A.!!$R4 777
24 TraesCS7B01G440200 chr6D 156256692 156257476 784 True 804.0 804 85.1710 10 796 1 chr6D.!!$R3 786
25 TraesCS7B01G440200 chr6A 607378680 607379315 635 False 717.0 717 87.0720 11 648 1 chr6A.!!$F1 637
26 TraesCS7B01G440200 chr4D 402826215 402828570 2355 False 517.0 540 90.1625 1 803 2 chr4D.!!$F1 802

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
97 98 0.89972 CCATGCCATTGGTGAGCTTT 59.1 50.0 4.26 0.0 31.74 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1950 9436 0.038343 CGGTTTGTCTGGCCCATTTG 60.038 55.0 0.0 0.0 0.0 2.32 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
56 57 3.192844 GGTAGATCTGGTGAAGTCGTGAA 59.807 47.826 5.18 0.00 0.00 3.18
57 58 4.321750 GGTAGATCTGGTGAAGTCGTGAAA 60.322 45.833 5.18 0.00 0.00 2.69
97 98 0.899720 CCATGCCATTGGTGAGCTTT 59.100 50.000 4.26 0.00 31.74 3.51
131 132 5.659849 ATTAGGAAGCCTTCATTGGAGAT 57.340 39.130 6.80 0.00 34.61 2.75
285 294 7.885399 ACCAAATAGGATTGTATTGGAGCTATC 59.115 37.037 9.63 0.00 41.22 2.08
751 2342 2.537529 CGTAGAATGTGCATTTGGCTCG 60.538 50.000 0.00 0.00 45.15 5.03
788 2379 4.080413 TCAAGATACTTGATGATGCCACCA 60.080 41.667 9.67 0.00 0.00 4.17
789 2380 4.508551 AGATACTTGATGATGCCACCAA 57.491 40.909 0.00 0.00 0.00 3.67
803 2394 6.491062 TGATGCCACCAAATTCTTCCTATATG 59.509 38.462 0.00 0.00 0.00 1.78
806 2397 5.048434 GCCACCAAATTCTTCCTATATGCTC 60.048 44.000 0.00 0.00 0.00 4.26
807 2398 6.064060 CCACCAAATTCTTCCTATATGCTCA 58.936 40.000 0.00 0.00 0.00 4.26
809 2400 7.068593 CCACCAAATTCTTCCTATATGCTCAAA 59.931 37.037 0.00 0.00 0.00 2.69
810 2401 8.636213 CACCAAATTCTTCCTATATGCTCAAAT 58.364 33.333 0.00 0.00 0.00 2.32
824 3593 8.867112 ATATGCTCAAATACTTGCTGAAATTG 57.133 30.769 0.00 0.00 32.14 2.32
827 3596 6.985645 TGCTCAAATACTTGCTGAAATTGTTT 59.014 30.769 0.00 0.00 32.14 2.83
868 8335 7.231317 ACTTGCTGAAATTCTTCCTTTATGTCA 59.769 33.333 0.00 0.00 0.00 3.58
1079 8546 0.322187 CCAAGAAACCCACTACCCCG 60.322 60.000 0.00 0.00 0.00 5.73
1097 8564 0.167470 CGCATGAAGAGGTTGCACAG 59.833 55.000 0.00 0.00 36.15 3.66
1211 8678 7.337689 TGCATCTAGTGAAAGAATTGCTATTGT 59.662 33.333 0.00 0.00 34.19 2.71
1264 8731 2.856222 CCATAGATGGTCTTTGGGAGC 58.144 52.381 8.13 0.00 40.50 4.70
1395 8862 6.428295 TCAAAAGAAGGTTTGGGTTTCTAGA 58.572 36.000 0.00 0.00 38.72 2.43
1415 8882 9.475620 TTCTAGATATGTCAAGAGTACCTTTCA 57.524 33.333 0.00 0.00 31.42 2.69
1525 8992 7.168219 TGTATGGATTAGCTCTTTTCACAACT 58.832 34.615 0.00 0.00 0.00 3.16
1596 9063 9.388506 CTCTATGGAATGTTGAACTATGAGTTT 57.611 33.333 0.00 0.00 38.80 2.66
1803 9289 4.464597 TGTTTTACACACAAAAGCCCTCTT 59.535 37.500 0.00 0.00 0.00 2.85
1806 9292 1.215423 ACACACAAAAGCCCTCTTCCT 59.785 47.619 0.00 0.00 0.00 3.36
1810 9296 1.499007 ACAAAAGCCCTCTTCCTTGGA 59.501 47.619 0.00 0.00 28.90 3.53
1824 9310 2.102578 CCTTGGATGGTTCATTGGTCC 58.897 52.381 0.00 0.00 0.00 4.46
1830 9316 0.186386 TGGTTCATTGGTCCCGGTTT 59.814 50.000 0.00 0.00 0.00 3.27
1840 9326 1.527380 TCCCGGTTTGTGGCTTGAC 60.527 57.895 0.00 0.00 0.00 3.18
1843 9329 1.826054 CGGTTTGTGGCTTGACCCA 60.826 57.895 0.00 0.00 37.83 4.51
1846 9332 0.668535 GTTTGTGGCTTGACCCAGTC 59.331 55.000 0.00 0.00 37.83 3.51
1871 9357 2.933834 CCTCCCTTTGGTCCCGGT 60.934 66.667 0.00 0.00 0.00 5.28
1899 9385 1.303236 CAACCGGGAGCAATGGTGA 60.303 57.895 6.32 0.00 35.79 4.02
1911 9397 2.578586 AATGGTGATGGGCCAGGAGC 62.579 60.000 13.78 11.09 39.65 4.70
1922 9408 2.515523 CAGGAGCGAGGCCCATTG 60.516 66.667 0.00 0.00 0.00 2.82
1928 9414 3.727258 CGAGGCCCATTGGTCCCA 61.727 66.667 0.00 0.00 36.69 4.37
1935 9421 0.960364 CCCATTGGTCCCAGTTCGTG 60.960 60.000 1.20 0.00 0.00 4.35
1936 9422 1.586154 CCATTGGTCCCAGTTCGTGC 61.586 60.000 0.00 0.00 0.00 5.34
1937 9423 0.606401 CATTGGTCCCAGTTCGTGCT 60.606 55.000 0.00 0.00 0.00 4.40
1938 9424 0.981183 ATTGGTCCCAGTTCGTGCTA 59.019 50.000 0.00 0.00 0.00 3.49
1950 9436 2.046604 GTGCTACCAACCGGGACC 60.047 66.667 6.32 0.00 41.15 4.46
1953 9439 1.073548 GCTACCAACCGGGACCAAA 59.926 57.895 6.32 0.00 41.15 3.28
1954 9440 0.323087 GCTACCAACCGGGACCAAAT 60.323 55.000 6.32 0.00 41.15 2.32
1964 9450 4.841441 GACCAAATGGGCCAGACA 57.159 55.556 13.78 0.00 42.05 3.41
1973 9459 2.671963 GGCCAGACAAACCGGGAC 60.672 66.667 6.32 0.00 0.00 4.46
1978 9464 0.881118 CAGACAAACCGGGACCAATG 59.119 55.000 6.32 0.00 0.00 2.82
2016 9502 4.410400 CCCCCTGGCCTCACGAAC 62.410 72.222 3.32 0.00 0.00 3.95
2017 9503 4.410400 CCCCTGGCCTCACGAACC 62.410 72.222 3.32 0.00 0.00 3.62
2018 9504 3.636231 CCCTGGCCTCACGAACCA 61.636 66.667 3.32 0.00 0.00 3.67
2029 9515 0.036164 CACGAACCAGGACCAATGGA 59.964 55.000 6.16 0.00 40.51 3.41
2052 9538 2.262603 GGGTACCGGTTCGTGACC 59.737 66.667 15.04 14.48 45.55 4.02
2078 9564 1.272147 GGGGCTAATGGGCTTATCTGG 60.272 57.143 0.00 0.00 40.65 3.86
2109 9595 4.910458 ATGCCCTGTTTTCTACTAGTGT 57.090 40.909 5.39 0.00 0.00 3.55
2110 9596 6.405065 CGTATGCCCTGTTTTCTACTAGTGTA 60.405 42.308 5.39 0.00 0.00 2.90
2111 9597 5.811796 TGCCCTGTTTTCTACTAGTGTAA 57.188 39.130 5.39 0.00 0.00 2.41
2112 9598 6.368779 TGCCCTGTTTTCTACTAGTGTAAT 57.631 37.500 5.39 0.00 0.00 1.89
2113 9599 6.403878 TGCCCTGTTTTCTACTAGTGTAATC 58.596 40.000 5.39 0.00 0.00 1.75
2114 9600 5.816258 GCCCTGTTTTCTACTAGTGTAATCC 59.184 44.000 5.39 0.00 0.00 3.01
2115 9601 6.346896 CCCTGTTTTCTACTAGTGTAATCCC 58.653 44.000 5.39 0.00 0.00 3.85
2116 9602 6.346896 CCTGTTTTCTACTAGTGTAATCCCC 58.653 44.000 5.39 0.00 0.00 4.81
2117 9603 6.156429 CCTGTTTTCTACTAGTGTAATCCCCT 59.844 42.308 5.39 0.00 0.00 4.79
2118 9604 7.179076 TGTTTTCTACTAGTGTAATCCCCTC 57.821 40.000 5.39 0.00 0.00 4.30
2119 9605 6.155737 TGTTTTCTACTAGTGTAATCCCCTCC 59.844 42.308 5.39 0.00 0.00 4.30
2120 9606 4.466255 TCTACTAGTGTAATCCCCTCCC 57.534 50.000 5.39 0.00 0.00 4.30
2121 9607 2.491312 ACTAGTGTAATCCCCTCCCC 57.509 55.000 0.00 0.00 0.00 4.81
2122 9608 1.654997 ACTAGTGTAATCCCCTCCCCA 59.345 52.381 0.00 0.00 0.00 4.96
2123 9609 2.252945 ACTAGTGTAATCCCCTCCCCAT 59.747 50.000 0.00 0.00 0.00 4.00
2124 9610 1.522900 AGTGTAATCCCCTCCCCATG 58.477 55.000 0.00 0.00 0.00 3.66
2125 9611 1.222567 GTGTAATCCCCTCCCCATGT 58.777 55.000 0.00 0.00 0.00 3.21
2126 9612 1.569072 GTGTAATCCCCTCCCCATGTT 59.431 52.381 0.00 0.00 0.00 2.71
2127 9613 1.850345 TGTAATCCCCTCCCCATGTTC 59.150 52.381 0.00 0.00 0.00 3.18
2128 9614 1.136828 TAATCCCCTCCCCATGTTCG 58.863 55.000 0.00 0.00 0.00 3.95
2129 9615 0.919289 AATCCCCTCCCCATGTTCGT 60.919 55.000 0.00 0.00 0.00 3.85
2130 9616 1.635817 ATCCCCTCCCCATGTTCGTG 61.636 60.000 0.00 0.00 0.00 4.35
2131 9617 2.602676 CCCCTCCCCATGTTCGTGT 61.603 63.158 0.00 0.00 0.00 4.49
2132 9618 1.078426 CCCTCCCCATGTTCGTGTC 60.078 63.158 0.00 0.00 0.00 3.67
2133 9619 1.447838 CCTCCCCATGTTCGTGTCG 60.448 63.158 0.00 0.00 0.00 4.35
2134 9620 1.589630 CTCCCCATGTTCGTGTCGA 59.410 57.895 0.00 0.00 0.00 4.20
2135 9621 0.175760 CTCCCCATGTTCGTGTCGAT 59.824 55.000 0.00 0.00 35.23 3.59
2136 9622 0.174845 TCCCCATGTTCGTGTCGATC 59.825 55.000 0.00 0.00 35.23 3.69
2137 9623 0.810031 CCCCATGTTCGTGTCGATCC 60.810 60.000 0.00 0.00 35.23 3.36
2138 9624 1.145759 CCCATGTTCGTGTCGATCCG 61.146 60.000 0.00 0.00 35.23 4.18
2139 9625 1.631072 CATGTTCGTGTCGATCCGC 59.369 57.895 0.00 0.00 35.23 5.54
2140 9626 1.518572 ATGTTCGTGTCGATCCGCC 60.519 57.895 0.00 0.00 35.23 6.13
2141 9627 2.126228 GTTCGTGTCGATCCGCCA 60.126 61.111 0.00 0.00 35.23 5.69
2142 9628 2.126228 TTCGTGTCGATCCGCCAC 60.126 61.111 0.00 0.00 35.23 5.01
2143 9629 2.921797 TTCGTGTCGATCCGCCACA 61.922 57.895 1.70 0.00 35.41 4.17
2144 9630 2.812542 TTCGTGTCGATCCGCCACAG 62.813 60.000 1.70 0.00 35.41 3.66
2145 9631 3.188786 GTGTCGATCCGCCACAGC 61.189 66.667 0.00 0.00 35.76 4.40
2146 9632 4.451150 TGTCGATCCGCCACAGCC 62.451 66.667 0.00 0.00 34.57 4.85
2147 9633 4.148825 GTCGATCCGCCACAGCCT 62.149 66.667 0.00 0.00 34.57 4.58
2148 9634 2.441348 TCGATCCGCCACAGCCTA 60.441 61.111 0.00 0.00 34.57 3.93
2149 9635 2.028190 CGATCCGCCACAGCCTAG 59.972 66.667 0.00 0.00 34.57 3.02
2150 9636 2.490148 CGATCCGCCACAGCCTAGA 61.490 63.158 0.00 0.00 34.57 2.43
2151 9637 1.823295 GATCCGCCACAGCCTAGAA 59.177 57.895 0.00 0.00 34.57 2.10
2152 9638 0.249657 GATCCGCCACAGCCTAGAAG 60.250 60.000 0.00 0.00 34.57 2.85
2153 9639 1.690219 ATCCGCCACAGCCTAGAAGG 61.690 60.000 0.00 0.00 38.80 3.46
2166 9652 4.320608 CCTAGAAGGCAGATCTGAAGTC 57.679 50.000 27.04 17.38 0.00 3.01
2167 9653 3.960102 CCTAGAAGGCAGATCTGAAGTCT 59.040 47.826 27.04 22.65 0.00 3.24
2168 9654 4.037923 CCTAGAAGGCAGATCTGAAGTCTC 59.962 50.000 27.04 13.42 0.00 3.36
2169 9655 3.711863 AGAAGGCAGATCTGAAGTCTCT 58.288 45.455 27.04 15.27 0.00 3.10
2170 9656 4.095946 AGAAGGCAGATCTGAAGTCTCTT 58.904 43.478 27.04 16.44 0.00 2.85
2171 9657 4.531732 AGAAGGCAGATCTGAAGTCTCTTT 59.468 41.667 27.04 9.64 0.00 2.52
2172 9658 5.719085 AGAAGGCAGATCTGAAGTCTCTTTA 59.281 40.000 27.04 0.00 0.00 1.85
2173 9659 5.596836 AGGCAGATCTGAAGTCTCTTTAG 57.403 43.478 27.04 0.00 0.00 1.85
2174 9660 4.119136 GGCAGATCTGAAGTCTCTTTAGC 58.881 47.826 27.04 5.60 0.00 3.09
2175 9661 4.119136 GCAGATCTGAAGTCTCTTTAGCC 58.881 47.826 27.04 0.00 0.00 3.93
2176 9662 4.382470 GCAGATCTGAAGTCTCTTTAGCCA 60.382 45.833 27.04 0.00 0.00 4.75
2177 9663 5.684552 GCAGATCTGAAGTCTCTTTAGCCAT 60.685 44.000 27.04 0.00 0.00 4.40
2178 9664 6.347696 CAGATCTGAAGTCTCTTTAGCCATT 58.652 40.000 18.34 0.00 0.00 3.16
2179 9665 6.258287 CAGATCTGAAGTCTCTTTAGCCATTG 59.742 42.308 18.34 0.00 0.00 2.82
2180 9666 4.256920 TCTGAAGTCTCTTTAGCCATTGC 58.743 43.478 0.00 0.00 37.95 3.56
2181 9667 3.347216 TGAAGTCTCTTTAGCCATTGCC 58.653 45.455 0.00 0.00 38.69 4.52
2182 9668 3.244875 TGAAGTCTCTTTAGCCATTGCCA 60.245 43.478 0.00 0.00 38.69 4.92
2183 9669 3.659183 AGTCTCTTTAGCCATTGCCAT 57.341 42.857 0.00 0.00 38.69 4.40
2184 9670 3.285484 AGTCTCTTTAGCCATTGCCATG 58.715 45.455 0.00 0.00 38.69 3.66
2185 9671 3.019564 GTCTCTTTAGCCATTGCCATGT 58.980 45.455 0.00 0.00 38.69 3.21
2186 9672 3.065925 GTCTCTTTAGCCATTGCCATGTC 59.934 47.826 0.00 0.00 38.69 3.06
2187 9673 3.018856 CTCTTTAGCCATTGCCATGTCA 58.981 45.455 0.00 0.00 38.69 3.58
2188 9674 3.634504 TCTTTAGCCATTGCCATGTCAT 58.365 40.909 0.00 0.00 38.69 3.06
2189 9675 3.382227 TCTTTAGCCATTGCCATGTCATG 59.618 43.478 5.79 5.79 38.69 3.07
2190 9676 2.732844 TAGCCATTGCCATGTCATGA 57.267 45.000 14.67 0.00 38.69 3.07
2191 9677 1.108776 AGCCATTGCCATGTCATGAC 58.891 50.000 19.27 19.27 38.69 3.06
2192 9678 0.818938 GCCATTGCCATGTCATGACA 59.181 50.000 29.67 29.67 46.44 3.58
2193 9679 2.953161 AGCCATTGCCATGTCATGACAT 60.953 45.455 31.28 31.28 43.35 3.06
2194 9680 3.688991 AGCCATTGCCATGTCATGACATA 60.689 43.478 34.77 22.75 43.76 2.29
2195 9681 5.762683 AGCCATTGCCATGTCATGACATAC 61.763 45.833 34.77 28.87 43.76 2.39
2196 9682 8.821735 TAGCCATTGCCATGTCATGACATACA 62.822 42.308 34.77 30.67 43.76 2.29
2215 9701 8.861033 ACATACAATTGAATGTCATGCATTAC 57.139 30.769 13.59 3.98 46.90 1.89
2216 9702 7.922278 ACATACAATTGAATGTCATGCATTACC 59.078 33.333 13.59 5.46 46.90 2.85
2217 9703 6.283544 ACAATTGAATGTCATGCATTACCA 57.716 33.333 13.59 0.63 46.90 3.25
2218 9704 6.880484 ACAATTGAATGTCATGCATTACCAT 58.120 32.000 13.59 2.99 46.90 3.55
2219 9705 6.982141 ACAATTGAATGTCATGCATTACCATC 59.018 34.615 13.59 7.24 46.90 3.51
2220 9706 6.718522 ATTGAATGTCATGCATTACCATCA 57.281 33.333 8.50 9.50 46.90 3.07
2221 9707 6.718522 TTGAATGTCATGCATTACCATCAT 57.281 33.333 8.50 0.07 46.90 2.45
2222 9708 7.820578 TTGAATGTCATGCATTACCATCATA 57.179 32.000 8.50 2.71 46.90 2.15
2223 9709 8.411991 TTGAATGTCATGCATTACCATCATAT 57.588 30.769 8.50 0.00 46.90 1.78
2224 9710 9.517868 TTGAATGTCATGCATTACCATCATATA 57.482 29.630 8.50 0.00 46.90 0.86
2225 9711 9.517868 TGAATGTCATGCATTACCATCATATAA 57.482 29.630 8.50 0.00 46.90 0.98
2249 9735 8.806429 AAATATATGATGTCTGTTGTTGGACA 57.194 30.769 0.00 0.00 44.84 4.02
2265 9751 5.433526 GTTGGACATACAACTTATAGGCCA 58.566 41.667 5.01 0.00 45.49 5.36
2266 9752 5.031066 TGGACATACAACTTATAGGCCAC 57.969 43.478 5.01 0.00 0.00 5.01
2267 9753 4.141574 TGGACATACAACTTATAGGCCACC 60.142 45.833 5.01 0.00 0.00 4.61
2268 9754 4.056050 GACATACAACTTATAGGCCACCG 58.944 47.826 5.01 0.00 0.00 4.94
2269 9755 3.453353 ACATACAACTTATAGGCCACCGT 59.547 43.478 5.01 0.00 0.00 4.83
2270 9756 2.396590 ACAACTTATAGGCCACCGTG 57.603 50.000 5.01 0.00 0.00 4.94
2271 9757 1.626825 ACAACTTATAGGCCACCGTGT 59.373 47.619 5.01 0.00 0.00 4.49
2272 9758 2.277084 CAACTTATAGGCCACCGTGTC 58.723 52.381 5.01 0.00 0.00 3.67
2273 9759 1.861982 ACTTATAGGCCACCGTGTCT 58.138 50.000 5.01 0.00 0.00 3.41
2274 9760 3.022557 ACTTATAGGCCACCGTGTCTA 57.977 47.619 5.01 0.08 0.00 2.59
2275 9761 3.573695 ACTTATAGGCCACCGTGTCTAT 58.426 45.455 5.01 13.04 0.00 1.98
2276 9762 4.733165 ACTTATAGGCCACCGTGTCTATA 58.267 43.478 5.01 11.66 0.00 1.31
2277 9763 5.331069 ACTTATAGGCCACCGTGTCTATAT 58.669 41.667 5.01 0.00 0.00 0.86
2278 9764 5.778750 ACTTATAGGCCACCGTGTCTATATT 59.221 40.000 5.01 7.03 0.00 1.28
2279 9765 6.950041 ACTTATAGGCCACCGTGTCTATATTA 59.050 38.462 5.01 5.67 0.00 0.98
2280 9766 7.452501 ACTTATAGGCCACCGTGTCTATATTAA 59.547 37.037 5.01 6.35 0.00 1.40
2281 9767 4.332428 AGGCCACCGTGTCTATATTAAC 57.668 45.455 5.01 0.00 0.00 2.01
2282 9768 3.707611 AGGCCACCGTGTCTATATTAACA 59.292 43.478 5.01 0.00 0.00 2.41
2283 9769 3.805971 GGCCACCGTGTCTATATTAACAC 59.194 47.826 0.00 9.24 41.84 3.32
2284 9770 4.442472 GGCCACCGTGTCTATATTAACACT 60.442 45.833 14.67 0.00 42.83 3.55
2285 9771 5.114081 GCCACCGTGTCTATATTAACACTT 58.886 41.667 14.67 3.53 42.83 3.16
2286 9772 5.006358 GCCACCGTGTCTATATTAACACTTG 59.994 44.000 14.67 11.87 42.83 3.16
2287 9773 6.334989 CCACCGTGTCTATATTAACACTTGA 58.665 40.000 14.67 0.00 42.83 3.02
2288 9774 6.814644 CCACCGTGTCTATATTAACACTTGAA 59.185 38.462 14.67 0.00 42.83 2.69
2289 9775 7.010183 CCACCGTGTCTATATTAACACTTGAAG 59.990 40.741 14.67 0.00 42.83 3.02
2290 9776 6.534079 ACCGTGTCTATATTAACACTTGAAGC 59.466 38.462 14.67 0.00 42.83 3.86
2291 9777 6.533723 CCGTGTCTATATTAACACTTGAAGCA 59.466 38.462 14.67 0.00 42.83 3.91
2292 9778 7.064134 CCGTGTCTATATTAACACTTGAAGCAA 59.936 37.037 14.67 0.00 42.83 3.91
2293 9779 8.110612 CGTGTCTATATTAACACTTGAAGCAAG 58.889 37.037 14.67 5.67 45.85 4.01
2294 9780 9.151471 GTGTCTATATTAACACTTGAAGCAAGA 57.849 33.333 13.56 0.00 43.42 3.02
2295 9781 9.719355 TGTCTATATTAACACTTGAAGCAAGAA 57.281 29.630 13.56 0.00 43.42 2.52
2303 9789 7.412137 AACACTTGAAGCAAGAAAATAATGC 57.588 32.000 13.56 0.00 43.42 3.56
2304 9790 6.514947 ACACTTGAAGCAAGAAAATAATGCA 58.485 32.000 13.56 0.00 43.42 3.96
2305 9791 7.156673 ACACTTGAAGCAAGAAAATAATGCAT 58.843 30.769 13.56 0.00 43.42 3.96
2306 9792 7.658575 ACACTTGAAGCAAGAAAATAATGCATT 59.341 29.630 17.56 17.56 43.42 3.56
2307 9793 8.166706 CACTTGAAGCAAGAAAATAATGCATTC 58.833 33.333 16.86 1.46 43.42 2.67
2308 9794 7.874016 ACTTGAAGCAAGAAAATAATGCATTCA 59.126 29.630 16.86 0.38 43.42 2.57
2309 9795 8.780846 TTGAAGCAAGAAAATAATGCATTCAT 57.219 26.923 16.86 2.87 42.45 2.57
2310 9796 8.415192 TGAAGCAAGAAAATAATGCATTCATC 57.585 30.769 16.86 10.00 42.45 2.92
2311 9797 8.255206 TGAAGCAAGAAAATAATGCATTCATCT 58.745 29.630 16.86 12.05 42.45 2.90
2312 9798 9.095065 GAAGCAAGAAAATAATGCATTCATCTT 57.905 29.630 16.86 16.79 42.45 2.40
2313 9799 9.444600 AAGCAAGAAAATAATGCATTCATCTTT 57.555 25.926 16.86 10.87 42.45 2.52
2314 9800 9.444600 AGCAAGAAAATAATGCATTCATCTTTT 57.555 25.926 16.86 16.16 42.45 2.27
2325 9811 7.953005 TGCATTCATCTTTTTATCCTAACCA 57.047 32.000 0.00 0.00 0.00 3.67
2326 9812 8.359875 TGCATTCATCTTTTTATCCTAACCAA 57.640 30.769 0.00 0.00 0.00 3.67
2327 9813 8.811017 TGCATTCATCTTTTTATCCTAACCAAA 58.189 29.630 0.00 0.00 0.00 3.28
2328 9814 9.822185 GCATTCATCTTTTTATCCTAACCAAAT 57.178 29.630 0.00 0.00 0.00 2.32
2343 9829 9.104965 TCCTAACCAAATATGACTTGATTAACG 57.895 33.333 0.00 0.00 0.00 3.18
2344 9830 8.342634 CCTAACCAAATATGACTTGATTAACGG 58.657 37.037 0.00 0.00 0.00 4.44
2345 9831 6.131544 ACCAAATATGACTTGATTAACGGC 57.868 37.500 0.00 0.00 0.00 5.68
2346 9832 5.885912 ACCAAATATGACTTGATTAACGGCT 59.114 36.000 0.00 0.00 0.00 5.52
2347 9833 6.038271 ACCAAATATGACTTGATTAACGGCTC 59.962 38.462 0.00 0.00 0.00 4.70
2348 9834 6.038161 CCAAATATGACTTGATTAACGGCTCA 59.962 38.462 0.00 0.00 0.00 4.26
2349 9835 6.851222 AATATGACTTGATTAACGGCTCAG 57.149 37.500 0.00 0.00 0.00 3.35
2350 9836 3.678056 TGACTTGATTAACGGCTCAGT 57.322 42.857 0.00 0.00 0.00 3.41
2351 9837 3.585862 TGACTTGATTAACGGCTCAGTC 58.414 45.455 0.00 0.00 0.00 3.51
2352 9838 3.006430 TGACTTGATTAACGGCTCAGTCA 59.994 43.478 0.00 0.00 32.36 3.41
2353 9839 4.184629 GACTTGATTAACGGCTCAGTCAT 58.815 43.478 0.00 0.00 0.00 3.06
2354 9840 3.935203 ACTTGATTAACGGCTCAGTCATG 59.065 43.478 0.00 0.00 0.00 3.07
2355 9841 2.279741 TGATTAACGGCTCAGTCATGC 58.720 47.619 0.00 0.00 0.00 4.06
2356 9842 2.279741 GATTAACGGCTCAGTCATGCA 58.720 47.619 0.00 0.00 0.00 3.96
2357 9843 2.177394 TTAACGGCTCAGTCATGCAA 57.823 45.000 0.00 0.00 0.00 4.08
2358 9844 2.401583 TAACGGCTCAGTCATGCAAT 57.598 45.000 0.00 0.00 0.00 3.56
2359 9845 1.538047 AACGGCTCAGTCATGCAATT 58.462 45.000 0.00 0.00 0.00 2.32
2360 9846 1.538047 ACGGCTCAGTCATGCAATTT 58.462 45.000 0.00 0.00 0.00 1.82
2361 9847 1.200716 ACGGCTCAGTCATGCAATTTG 59.799 47.619 0.00 0.00 0.00 2.32
2362 9848 1.636988 GGCTCAGTCATGCAATTTGC 58.363 50.000 14.49 14.49 45.29 3.68
2380 9866 9.848172 GCAATTTGCGACATTTTATAAAATAGG 57.152 29.630 20.32 13.03 33.43 2.57
2385 9871 9.796120 TTGCGACATTTTATAAAATAGGGAAAG 57.204 29.630 20.32 10.64 36.52 2.62
2386 9872 8.962679 TGCGACATTTTATAAAATAGGGAAAGT 58.037 29.630 20.32 13.27 36.52 2.66
2395 9881 9.734984 TTATAAAATAGGGAAAGTAGGCATAGC 57.265 33.333 0.00 0.00 0.00 2.97
2405 9891 2.203209 GGCATAGCCGGTCCCAAG 60.203 66.667 1.90 0.00 39.62 3.61
2406 9892 2.902343 GCATAGCCGGTCCCAAGC 60.902 66.667 1.90 0.00 0.00 4.01
2407 9893 2.203209 CATAGCCGGTCCCAAGCC 60.203 66.667 1.90 0.00 0.00 4.35
2408 9894 3.489513 ATAGCCGGTCCCAAGCCC 61.490 66.667 1.90 0.00 0.00 5.19
2417 9903 2.044352 CCCAAGCCCGGGTAAAGG 60.044 66.667 24.63 18.41 41.83 3.11
2418 9904 2.608550 CCCAAGCCCGGGTAAAGGA 61.609 63.158 24.63 0.00 41.83 3.36
2419 9905 1.077716 CCAAGCCCGGGTAAAGGAG 60.078 63.158 24.63 5.31 0.00 3.69
2420 9906 1.077716 CAAGCCCGGGTAAAGGAGG 60.078 63.158 24.63 0.00 0.00 4.30
2421 9907 1.229723 AAGCCCGGGTAAAGGAGGA 60.230 57.895 24.63 0.00 0.00 3.71
2422 9908 1.272554 AAGCCCGGGTAAAGGAGGAG 61.273 60.000 24.63 0.00 0.00 3.69
2423 9909 2.743179 GCCCGGGTAAAGGAGGAGG 61.743 68.421 24.63 0.00 0.00 4.30
2424 9910 2.070650 CCCGGGTAAAGGAGGAGGG 61.071 68.421 14.18 0.00 0.00 4.30
2425 9911 1.306739 CCGGGTAAAGGAGGAGGGT 60.307 63.158 0.00 0.00 0.00 4.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
56 57 6.607019 TGGAGTACCCTTTTGAAGTAACATT 58.393 36.000 0.00 0.00 35.38 2.71
57 58 6.195600 TGGAGTACCCTTTTGAAGTAACAT 57.804 37.500 0.00 0.00 35.38 2.71
97 98 5.219739 AGGCTTCCTAATAAGGTCATCTCA 58.780 41.667 0.00 0.00 44.09 3.27
131 132 7.231925 GGTAGTTTCCTTCTATTTTGGTTTGGA 59.768 37.037 0.00 0.00 0.00 3.53
355 1928 3.625764 GCCGCCATAACATTTTGAGTAGA 59.374 43.478 0.00 0.00 0.00 2.59
581 2171 8.097038 TCCATATCCAGCATCAACTAGATAAAC 58.903 37.037 0.00 0.00 34.43 2.01
751 2342 9.429359 TCAAGTATCTTGAATCTTCTCTTCAAC 57.571 33.333 9.34 0.00 37.61 3.18
803 2394 7.383300 AGAAACAATTTCAGCAAGTATTTGAGC 59.617 33.333 1.56 0.00 42.10 4.26
809 2400 9.956720 GCATATAGAAACAATTTCAGCAAGTAT 57.043 29.630 4.25 0.00 42.10 2.12
810 2401 9.177608 AGCATATAGAAACAATTTCAGCAAGTA 57.822 29.630 4.25 0.00 42.10 2.24
824 3593 8.830580 TCAGCAAGTATTTGAGCATATAGAAAC 58.169 33.333 1.56 0.00 36.36 2.78
827 3596 8.962884 TTTCAGCAAGTATTTGAGCATATAGA 57.037 30.769 1.56 0.00 36.36 1.98
1079 8546 1.198637 GACTGTGCAACCTCTTCATGC 59.801 52.381 0.00 0.00 40.45 4.06
1137 8604 2.493278 CGCAGAAGGATTTGGTTTGGAT 59.507 45.455 0.00 0.00 0.00 3.41
1138 8605 1.885887 CGCAGAAGGATTTGGTTTGGA 59.114 47.619 0.00 0.00 0.00 3.53
1154 8621 1.429463 GTGTAACCTGTCTTCCGCAG 58.571 55.000 0.00 0.00 0.00 5.18
1211 8678 4.576873 CGGTGCTAGAACTCTTCTCTATCA 59.423 45.833 0.00 0.00 41.14 2.15
1264 8731 1.656652 CCAGGGAGTACTTTCATGCG 58.343 55.000 0.00 0.00 0.00 4.73
1395 8862 7.497249 GCTTCATGAAAGGTACTCTTGACATAT 59.503 37.037 9.88 0.00 38.49 1.78
1415 8882 1.003355 CACCACCCTCACGCTTCAT 60.003 57.895 0.00 0.00 0.00 2.57
1772 9258 8.874816 GGCTTTTGTGTGTAAAACATTAAAAGA 58.125 29.630 21.80 1.76 46.11 2.52
1785 9271 2.441750 AGGAAGAGGGCTTTTGTGTGTA 59.558 45.455 0.00 0.00 33.61 2.90
1803 9289 2.291540 GGACCAATGAACCATCCAAGGA 60.292 50.000 0.00 0.00 0.00 3.36
1806 9292 1.615651 CGGGACCAATGAACCATCCAA 60.616 52.381 0.00 0.00 0.00 3.53
1810 9296 0.407918 AACCGGGACCAATGAACCAT 59.592 50.000 6.32 0.00 0.00 3.55
1824 9310 2.561037 GGGTCAAGCCACAAACCGG 61.561 63.158 0.00 0.00 39.65 5.28
1830 9316 0.472925 TAGGACTGGGTCAAGCCACA 60.473 55.000 0.00 0.00 39.65 4.17
1840 9326 1.205055 GGGAGGTCTTTAGGACTGGG 58.795 60.000 0.00 0.00 43.97 4.45
1843 9329 2.913617 CCAAAGGGAGGTCTTTAGGACT 59.086 50.000 0.00 0.00 39.75 3.85
1855 9341 1.002502 GAACCGGGACCAAAGGGAG 60.003 63.158 6.32 0.00 38.05 4.30
1856 9342 1.770927 TGAACCGGGACCAAAGGGA 60.771 57.895 6.32 0.00 38.05 4.20
1879 9365 3.451894 CCATTGCTCCCGGTTGGC 61.452 66.667 0.00 1.74 0.00 4.52
1881 9367 0.680921 ATCACCATTGCTCCCGGTTG 60.681 55.000 0.00 0.00 0.00 3.77
1887 9373 2.129785 GGCCCATCACCATTGCTCC 61.130 63.158 0.00 0.00 0.00 4.70
1889 9375 1.380785 CTGGCCCATCACCATTGCT 60.381 57.895 0.00 0.00 36.36 3.91
1890 9376 2.428925 CCTGGCCCATCACCATTGC 61.429 63.158 0.00 0.00 36.36 3.56
1922 9408 1.079336 GGTAGCACGAACTGGGACC 60.079 63.158 0.00 0.00 0.00 4.46
1928 9414 1.005394 CCGGTTGGTAGCACGAACT 60.005 57.895 6.51 0.00 37.07 3.01
1935 9421 0.323087 ATTTGGTCCCGGTTGGTAGC 60.323 55.000 0.00 0.00 34.77 3.58
1936 9422 1.459450 CATTTGGTCCCGGTTGGTAG 58.541 55.000 0.00 0.00 34.77 3.18
1937 9423 0.038455 CCATTTGGTCCCGGTTGGTA 59.962 55.000 0.00 0.00 34.77 3.25
1938 9424 1.228737 CCATTTGGTCCCGGTTGGT 60.229 57.895 0.00 0.00 34.77 3.67
1950 9436 0.038343 CGGTTTGTCTGGCCCATTTG 60.038 55.000 0.00 0.00 0.00 2.32
1953 9439 2.035626 CCGGTTTGTCTGGCCCAT 59.964 61.111 0.00 0.00 35.61 4.00
1954 9440 4.278513 CCCGGTTTGTCTGGCCCA 62.279 66.667 0.00 0.00 41.11 5.36
1959 9445 0.881118 CATTGGTCCCGGTTTGTCTG 59.119 55.000 0.00 0.00 0.00 3.51
1964 9450 2.283604 GGCCATTGGTCCCGGTTT 60.284 61.111 0.00 0.00 0.00 3.27
2016 9502 0.396139 CATGGGTCCATTGGTCCTGG 60.396 60.000 17.00 5.17 33.90 4.45
2017 9503 0.396139 CCATGGGTCCATTGGTCCTG 60.396 60.000 17.00 9.41 33.90 3.86
2018 9504 1.583784 CCCATGGGTCCATTGGTCCT 61.584 60.000 23.93 0.00 35.31 3.85
2052 9538 2.203153 CCCATTAGCCCCGGTTCG 60.203 66.667 0.00 0.00 0.00 3.95
2057 9543 0.693049 AGATAAGCCCATTAGCCCCG 59.307 55.000 0.00 0.00 29.64 5.73
2061 9547 1.539157 GGCCAGATAAGCCCATTAGC 58.461 55.000 0.00 0.00 45.16 3.09
2078 9564 4.910585 CAGGGCATACGTCCGGGC 62.911 72.222 0.00 0.00 43.99 6.13
2083 9569 3.858247 AGTAGAAAACAGGGCATACGTC 58.142 45.455 0.00 0.00 0.00 4.34
2109 9595 1.136828 CGAACATGGGGAGGGGATTA 58.863 55.000 0.00 0.00 0.00 1.75
2110 9596 0.919289 ACGAACATGGGGAGGGGATT 60.919 55.000 0.00 0.00 0.00 3.01
2111 9597 1.307866 ACGAACATGGGGAGGGGAT 60.308 57.895 0.00 0.00 0.00 3.85
2112 9598 2.124085 ACGAACATGGGGAGGGGA 59.876 61.111 0.00 0.00 0.00 4.81
2113 9599 2.272146 CACGAACATGGGGAGGGG 59.728 66.667 0.00 0.00 0.00 4.79
2114 9600 1.078426 GACACGAACATGGGGAGGG 60.078 63.158 0.00 0.00 0.00 4.30
2115 9601 1.447838 CGACACGAACATGGGGAGG 60.448 63.158 0.00 0.00 0.00 4.30
2116 9602 0.175760 ATCGACACGAACATGGGGAG 59.824 55.000 0.00 0.00 39.99 4.30
2117 9603 0.174845 GATCGACACGAACATGGGGA 59.825 55.000 0.00 0.00 39.99 4.81
2118 9604 0.810031 GGATCGACACGAACATGGGG 60.810 60.000 0.00 0.00 39.99 4.96
2119 9605 1.145759 CGGATCGACACGAACATGGG 61.146 60.000 4.72 0.00 39.99 4.00
2120 9606 1.752501 GCGGATCGACACGAACATGG 61.753 60.000 13.96 0.00 39.99 3.66
2121 9607 1.631072 GCGGATCGACACGAACATG 59.369 57.895 13.96 0.00 39.99 3.21
2122 9608 1.518572 GGCGGATCGACACGAACAT 60.519 57.895 13.96 0.00 39.99 2.71
2123 9609 2.126228 GGCGGATCGACACGAACA 60.126 61.111 13.96 0.00 39.99 3.18
2124 9610 2.126228 TGGCGGATCGACACGAAC 60.126 61.111 13.96 6.73 41.22 3.95
2129 9615 4.451150 GGCTGTGGCGGATCGACA 62.451 66.667 0.00 0.00 45.13 4.35
2130 9616 2.685387 CTAGGCTGTGGCGGATCGAC 62.685 65.000 0.00 0.00 39.81 4.20
2131 9617 2.441348 TAGGCTGTGGCGGATCGA 60.441 61.111 0.00 0.00 39.81 3.59
2132 9618 2.016393 TTCTAGGCTGTGGCGGATCG 62.016 60.000 0.00 0.00 39.81 3.69
2133 9619 0.249657 CTTCTAGGCTGTGGCGGATC 60.250 60.000 0.00 0.00 39.81 3.36
2134 9620 1.690219 CCTTCTAGGCTGTGGCGGAT 61.690 60.000 0.00 0.00 39.81 4.18
2135 9621 2.359169 CCTTCTAGGCTGTGGCGGA 61.359 63.158 0.00 0.00 39.81 5.54
2136 9622 2.187946 CCTTCTAGGCTGTGGCGG 59.812 66.667 0.00 0.00 39.81 6.13
2145 9631 3.960102 AGACTTCAGATCTGCCTTCTAGG 59.040 47.826 18.36 2.73 38.80 3.02
2146 9632 4.889409 AGAGACTTCAGATCTGCCTTCTAG 59.111 45.833 18.36 9.77 0.00 2.43
2147 9633 4.865905 AGAGACTTCAGATCTGCCTTCTA 58.134 43.478 18.36 0.00 0.00 2.10
2148 9634 3.711863 AGAGACTTCAGATCTGCCTTCT 58.288 45.455 18.36 16.73 0.00 2.85
2149 9635 4.470334 AAGAGACTTCAGATCTGCCTTC 57.530 45.455 18.36 12.53 0.00 3.46
2150 9636 4.906747 AAAGAGACTTCAGATCTGCCTT 57.093 40.909 18.36 10.23 0.00 4.35
2151 9637 4.141959 GCTAAAGAGACTTCAGATCTGCCT 60.142 45.833 18.36 11.42 0.00 4.75
2152 9638 4.119136 GCTAAAGAGACTTCAGATCTGCC 58.881 47.826 18.36 6.95 0.00 4.85
2153 9639 4.119136 GGCTAAAGAGACTTCAGATCTGC 58.881 47.826 18.36 3.87 0.00 4.26
2154 9640 5.336150 TGGCTAAAGAGACTTCAGATCTG 57.664 43.478 17.07 17.07 0.00 2.90
2155 9641 6.347696 CAATGGCTAAAGAGACTTCAGATCT 58.652 40.000 0.00 0.00 0.00 2.75
2156 9642 5.007528 GCAATGGCTAAAGAGACTTCAGATC 59.992 44.000 0.00 0.00 36.96 2.75
2157 9643 4.880696 GCAATGGCTAAAGAGACTTCAGAT 59.119 41.667 0.00 0.00 36.96 2.90
2158 9644 4.256920 GCAATGGCTAAAGAGACTTCAGA 58.743 43.478 0.00 0.00 36.96 3.27
2159 9645 3.376546 GGCAATGGCTAAAGAGACTTCAG 59.623 47.826 0.00 0.00 40.87 3.02
2160 9646 3.244875 TGGCAATGGCTAAAGAGACTTCA 60.245 43.478 8.59 0.00 40.87 3.02
2161 9647 3.347216 TGGCAATGGCTAAAGAGACTTC 58.653 45.455 8.59 0.00 40.87 3.01
2162 9648 3.439857 TGGCAATGGCTAAAGAGACTT 57.560 42.857 8.59 0.00 40.87 3.01
2163 9649 3.285484 CATGGCAATGGCTAAAGAGACT 58.715 45.455 8.59 0.00 40.87 3.24
2164 9650 3.019564 ACATGGCAATGGCTAAAGAGAC 58.980 45.455 8.59 0.00 40.87 3.36
2165 9651 3.282021 GACATGGCAATGGCTAAAGAGA 58.718 45.455 8.59 0.00 38.95 3.10
2166 9652 3.018856 TGACATGGCAATGGCTAAAGAG 58.981 45.455 8.80 0.00 42.94 2.85
2167 9653 3.084536 TGACATGGCAATGGCTAAAGA 57.915 42.857 8.80 0.00 42.94 2.52
2168 9654 3.382227 TCATGACATGGCAATGGCTAAAG 59.618 43.478 4.70 0.00 42.94 1.85
2169 9655 3.130869 GTCATGACATGGCAATGGCTAAA 59.869 43.478 21.07 0.00 42.94 1.85
2170 9656 2.689471 GTCATGACATGGCAATGGCTAA 59.311 45.455 21.07 0.00 42.94 3.09
2171 9657 2.300433 GTCATGACATGGCAATGGCTA 58.700 47.619 21.07 0.00 42.94 3.93
2172 9658 1.108776 GTCATGACATGGCAATGGCT 58.891 50.000 21.07 0.00 42.94 4.75
2173 9659 0.818938 TGTCATGACATGGCAATGGC 59.181 50.000 24.56 7.00 42.78 4.40
2189 9675 7.997107 AATGCATGACATTCAATTGTATGTC 57.003 32.000 33.99 33.99 46.28 3.06
2190 9676 7.922278 GGTAATGCATGACATTCAATTGTATGT 59.078 33.333 25.27 25.27 46.28 2.29
2191 9677 7.921745 TGGTAATGCATGACATTCAATTGTATG 59.078 33.333 19.92 19.92 46.28 2.39
2192 9678 8.009622 TGGTAATGCATGACATTCAATTGTAT 57.990 30.769 16.28 0.00 46.28 2.29
2193 9679 7.401955 TGGTAATGCATGACATTCAATTGTA 57.598 32.000 16.28 0.00 46.28 2.41
2194 9680 6.283544 TGGTAATGCATGACATTCAATTGT 57.716 33.333 16.28 0.00 46.28 2.71
2195 9681 6.981559 TGATGGTAATGCATGACATTCAATTG 59.018 34.615 16.28 0.00 46.28 2.32
2196 9682 7.114866 TGATGGTAATGCATGACATTCAATT 57.885 32.000 16.28 0.00 46.28 2.32
2197 9683 6.718522 TGATGGTAATGCATGACATTCAAT 57.281 33.333 16.28 9.87 46.28 2.57
2198 9684 6.718522 ATGATGGTAATGCATGACATTCAA 57.281 33.333 16.28 4.08 46.28 2.69
2199 9685 9.517868 TTATATGATGGTAATGCATGACATTCA 57.482 29.630 16.28 16.41 46.28 2.57
2223 9709 9.898152 TGTCCAACAACAGACATCATATATTTA 57.102 29.630 0.00 0.00 38.07 1.40
2224 9710 8.806429 TGTCCAACAACAGACATCATATATTT 57.194 30.769 0.00 0.00 38.07 1.40
2240 9726 5.883673 GGCCTATAAGTTGTATGTCCAACAA 59.116 40.000 0.00 0.00 45.66 2.83
2241 9727 5.045505 TGGCCTATAAGTTGTATGTCCAACA 60.046 40.000 3.32 0.00 45.66 3.33
2242 9728 5.296035 GTGGCCTATAAGTTGTATGTCCAAC 59.704 44.000 3.32 0.00 44.00 3.77
2243 9729 5.433526 GTGGCCTATAAGTTGTATGTCCAA 58.566 41.667 3.32 0.00 0.00 3.53
2244 9730 4.141574 GGTGGCCTATAAGTTGTATGTCCA 60.142 45.833 3.32 0.00 0.00 4.02
2245 9731 4.386711 GGTGGCCTATAAGTTGTATGTCC 58.613 47.826 3.32 0.00 0.00 4.02
2246 9732 4.056050 CGGTGGCCTATAAGTTGTATGTC 58.944 47.826 3.32 0.00 0.00 3.06
2247 9733 3.453353 ACGGTGGCCTATAAGTTGTATGT 59.547 43.478 3.32 0.00 0.00 2.29
2248 9734 3.807622 CACGGTGGCCTATAAGTTGTATG 59.192 47.826 3.32 0.00 0.00 2.39
2249 9735 3.453353 ACACGGTGGCCTATAAGTTGTAT 59.547 43.478 13.48 0.00 0.00 2.29
2250 9736 2.833338 ACACGGTGGCCTATAAGTTGTA 59.167 45.455 13.48 0.00 0.00 2.41
2251 9737 1.626825 ACACGGTGGCCTATAAGTTGT 59.373 47.619 13.48 0.00 0.00 3.32
2252 9738 2.093658 AGACACGGTGGCCTATAAGTTG 60.094 50.000 11.09 0.00 0.00 3.16
2253 9739 2.185387 AGACACGGTGGCCTATAAGTT 58.815 47.619 11.09 0.00 0.00 2.66
2254 9740 1.861982 AGACACGGTGGCCTATAAGT 58.138 50.000 11.09 0.00 0.00 2.24
2255 9741 5.916661 ATATAGACACGGTGGCCTATAAG 57.083 43.478 23.59 0.00 29.90 1.73
2256 9742 7.233144 TGTTAATATAGACACGGTGGCCTATAA 59.767 37.037 23.59 14.11 29.90 0.98
2257 9743 6.720748 TGTTAATATAGACACGGTGGCCTATA 59.279 38.462 22.75 22.75 30.31 1.31
2258 9744 5.541101 TGTTAATATAGACACGGTGGCCTAT 59.459 40.000 11.09 17.62 0.00 2.57
2259 9745 4.894705 TGTTAATATAGACACGGTGGCCTA 59.105 41.667 11.09 12.04 0.00 3.93
2260 9746 3.707611 TGTTAATATAGACACGGTGGCCT 59.292 43.478 11.09 10.18 0.00 5.19
2261 9747 3.805971 GTGTTAATATAGACACGGTGGCC 59.194 47.826 11.09 0.00 37.08 5.36
2268 9754 9.151471 TCTTGCTTCAAGTGTTAATATAGACAC 57.849 33.333 11.60 11.60 44.93 3.67
2269 9755 9.719355 TTCTTGCTTCAAGTGTTAATATAGACA 57.281 29.630 6.47 0.00 41.66 3.41
2277 9763 8.977505 GCATTATTTTCTTGCTTCAAGTGTTAA 58.022 29.630 6.47 2.96 41.66 2.01
2278 9764 8.140628 TGCATTATTTTCTTGCTTCAAGTGTTA 58.859 29.630 6.47 0.00 41.66 2.41
2279 9765 6.985645 TGCATTATTTTCTTGCTTCAAGTGTT 59.014 30.769 6.47 0.00 41.66 3.32
2280 9766 6.514947 TGCATTATTTTCTTGCTTCAAGTGT 58.485 32.000 6.47 0.00 41.66 3.55
2281 9767 7.591006 ATGCATTATTTTCTTGCTTCAAGTG 57.409 32.000 0.00 0.00 41.66 3.16
2282 9768 7.874016 TGAATGCATTATTTTCTTGCTTCAAGT 59.126 29.630 12.97 0.00 41.66 3.16
2283 9769 8.246908 TGAATGCATTATTTTCTTGCTTCAAG 57.753 30.769 12.97 0.37 42.25 3.02
2284 9770 8.780846 ATGAATGCATTATTTTCTTGCTTCAA 57.219 26.923 12.97 0.00 37.22 2.69
2285 9771 8.255206 AGATGAATGCATTATTTTCTTGCTTCA 58.745 29.630 12.97 2.28 37.62 3.02
2286 9772 8.644318 AGATGAATGCATTATTTTCTTGCTTC 57.356 30.769 12.97 4.60 37.28 3.86
2287 9773 9.444600 AAAGATGAATGCATTATTTTCTTGCTT 57.555 25.926 12.97 3.41 34.47 3.91
2288 9774 9.444600 AAAAGATGAATGCATTATTTTCTTGCT 57.555 25.926 12.97 6.94 34.47 3.91
2299 9785 8.980596 TGGTTAGGATAAAAAGATGAATGCATT 58.019 29.630 12.83 12.83 34.11 3.56
2300 9786 8.537728 TGGTTAGGATAAAAAGATGAATGCAT 57.462 30.769 0.00 0.00 37.47 3.96
2301 9787 7.953005 TGGTTAGGATAAAAAGATGAATGCA 57.047 32.000 0.00 0.00 0.00 3.96
2302 9788 9.822185 ATTTGGTTAGGATAAAAAGATGAATGC 57.178 29.630 0.00 0.00 0.00 3.56
2317 9803 9.104965 CGTTAATCAAGTCATATTTGGTTAGGA 57.895 33.333 0.00 0.00 33.88 2.94
2318 9804 8.342634 CCGTTAATCAAGTCATATTTGGTTAGG 58.657 37.037 0.00 0.00 33.88 2.69
2319 9805 7.855904 GCCGTTAATCAAGTCATATTTGGTTAG 59.144 37.037 0.00 0.00 33.88 2.34
2320 9806 7.554835 AGCCGTTAATCAAGTCATATTTGGTTA 59.445 33.333 0.00 0.00 31.70 2.85
2321 9807 6.377146 AGCCGTTAATCAAGTCATATTTGGTT 59.623 34.615 0.00 0.00 33.68 3.67
2322 9808 5.885912 AGCCGTTAATCAAGTCATATTTGGT 59.114 36.000 0.00 0.00 0.00 3.67
2323 9809 6.038161 TGAGCCGTTAATCAAGTCATATTTGG 59.962 38.462 0.00 0.00 0.00 3.28
2324 9810 7.015226 TGAGCCGTTAATCAAGTCATATTTG 57.985 36.000 0.00 0.00 0.00 2.32
2325 9811 6.823689 ACTGAGCCGTTAATCAAGTCATATTT 59.176 34.615 0.00 0.00 0.00 1.40
2326 9812 6.349300 ACTGAGCCGTTAATCAAGTCATATT 58.651 36.000 0.00 0.00 0.00 1.28
2327 9813 5.918608 ACTGAGCCGTTAATCAAGTCATAT 58.081 37.500 0.00 0.00 0.00 1.78
2328 9814 5.105513 TGACTGAGCCGTTAATCAAGTCATA 60.106 40.000 0.00 0.00 33.09 2.15
2329 9815 4.184629 GACTGAGCCGTTAATCAAGTCAT 58.815 43.478 0.00 0.00 0.00 3.06
2330 9816 3.006430 TGACTGAGCCGTTAATCAAGTCA 59.994 43.478 0.00 0.00 34.35 3.41
2331 9817 3.585862 TGACTGAGCCGTTAATCAAGTC 58.414 45.455 0.00 0.00 0.00 3.01
2332 9818 3.678056 TGACTGAGCCGTTAATCAAGT 57.322 42.857 0.00 0.00 0.00 3.16
2333 9819 3.242543 GCATGACTGAGCCGTTAATCAAG 60.243 47.826 0.00 0.00 0.00 3.02
2334 9820 2.677836 GCATGACTGAGCCGTTAATCAA 59.322 45.455 0.00 0.00 0.00 2.57
2335 9821 2.279741 GCATGACTGAGCCGTTAATCA 58.720 47.619 0.00 0.00 0.00 2.57
2336 9822 2.279741 TGCATGACTGAGCCGTTAATC 58.720 47.619 0.00 0.00 0.00 1.75
2337 9823 2.401583 TGCATGACTGAGCCGTTAAT 57.598 45.000 0.00 0.00 0.00 1.40
2338 9824 2.177394 TTGCATGACTGAGCCGTTAA 57.823 45.000 0.00 0.00 0.00 2.01
2339 9825 2.401583 ATTGCATGACTGAGCCGTTA 57.598 45.000 0.00 0.00 0.00 3.18
2340 9826 1.538047 AATTGCATGACTGAGCCGTT 58.462 45.000 0.00 0.00 0.00 4.44
2341 9827 1.200716 CAAATTGCATGACTGAGCCGT 59.799 47.619 0.00 0.00 0.00 5.68
2342 9828 1.904144 CAAATTGCATGACTGAGCCG 58.096 50.000 0.00 0.00 0.00 5.52
2343 9829 1.636988 GCAAATTGCATGACTGAGCC 58.363 50.000 13.73 0.00 44.26 4.70
2344 9830 1.135603 TCGCAAATTGCATGACTGAGC 60.136 47.619 18.65 0.00 45.36 4.26
2345 9831 2.095617 TGTCGCAAATTGCATGACTGAG 60.096 45.455 18.65 0.00 45.36 3.35
2346 9832 1.878734 TGTCGCAAATTGCATGACTGA 59.121 42.857 18.65 2.86 45.36 3.41
2347 9833 2.334971 TGTCGCAAATTGCATGACTG 57.665 45.000 18.65 0.28 45.36 3.51
2348 9834 3.581024 AATGTCGCAAATTGCATGACT 57.419 38.095 18.65 5.68 45.36 3.41
2349 9835 4.650545 AAAATGTCGCAAATTGCATGAC 57.349 36.364 18.65 16.99 45.36 3.06
2350 9836 8.471361 TTTATAAAATGTCGCAAATTGCATGA 57.529 26.923 18.65 5.12 45.36 3.07
2351 9837 9.705471 ATTTTATAAAATGTCGCAAATTGCATG 57.295 25.926 20.14 2.56 39.07 4.06
2354 9840 9.848172 CCTATTTTATAAAATGTCGCAAATTGC 57.152 29.630 26.61 8.09 38.90 3.56
2359 9845 9.796120 CTTTCCCTATTTTATAAAATGTCGCAA 57.204 29.630 26.61 15.46 38.90 4.85
2360 9846 8.962679 ACTTTCCCTATTTTATAAAATGTCGCA 58.037 29.630 26.61 10.71 38.90 5.10
2369 9855 9.734984 GCTATGCCTACTTTCCCTATTTTATAA 57.265 33.333 0.00 0.00 0.00 0.98
2370 9856 8.326529 GGCTATGCCTACTTTCCCTATTTTATA 58.673 37.037 0.73 0.00 46.69 0.98
2371 9857 7.175797 GGCTATGCCTACTTTCCCTATTTTAT 58.824 38.462 0.73 0.00 46.69 1.40
2372 9858 6.540083 GGCTATGCCTACTTTCCCTATTTTA 58.460 40.000 0.73 0.00 46.69 1.52
2373 9859 5.386060 GGCTATGCCTACTTTCCCTATTTT 58.614 41.667 0.73 0.00 46.69 1.82
2374 9860 4.986783 GGCTATGCCTACTTTCCCTATTT 58.013 43.478 0.73 0.00 46.69 1.40
2375 9861 4.642466 GGCTATGCCTACTTTCCCTATT 57.358 45.455 0.73 0.00 46.69 1.73
2388 9874 2.203209 CTTGGGACCGGCTATGCC 60.203 66.667 0.00 0.00 46.75 4.40
2389 9875 2.902343 GCTTGGGACCGGCTATGC 60.902 66.667 0.00 0.00 0.00 3.14
2390 9876 2.203209 GGCTTGGGACCGGCTATG 60.203 66.667 0.00 0.00 0.00 2.23
2391 9877 3.489513 GGGCTTGGGACCGGCTAT 61.490 66.667 0.00 0.00 0.00 2.97
2401 9887 1.077716 CTCCTTTACCCGGGCTTGG 60.078 63.158 24.08 17.99 0.00 3.61
2402 9888 1.077716 CCTCCTTTACCCGGGCTTG 60.078 63.158 24.08 8.51 0.00 4.01
2403 9889 1.229723 TCCTCCTTTACCCGGGCTT 60.230 57.895 24.08 4.08 0.00 4.35
2404 9890 1.689582 CTCCTCCTTTACCCGGGCT 60.690 63.158 24.08 10.93 0.00 5.19
2405 9891 2.743179 CCTCCTCCTTTACCCGGGC 61.743 68.421 24.08 0.00 0.00 6.13
2406 9892 2.070650 CCCTCCTCCTTTACCCGGG 61.071 68.421 22.25 22.25 0.00 5.73
2407 9893 1.306739 ACCCTCCTCCTTTACCCGG 60.307 63.158 0.00 0.00 0.00 5.73
2408 9894 4.474642 ACCCTCCTCCTTTACCCG 57.525 61.111 0.00 0.00 0.00 5.28


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.