Multiple sequence alignment - TraesCS7B01G433400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G433400 chr7B 100.000 3476 0 0 1 3476 700825956 700829431 0.000000e+00 6420
1 TraesCS7B01G433400 chr7A 89.195 2943 183 49 592 3476 701527973 701530838 0.000000e+00 3548
2 TraesCS7B01G433400 chr7D 90.040 2741 184 46 455 3171 611590389 611593064 0.000000e+00 3467
3 TraesCS7B01G433400 chr7D 94.275 262 9 2 3212 3473 611593163 611593418 2.510000e-106 396
4 TraesCS7B01G433400 chr7D 87.171 304 35 3 24 326 239628781 239629081 3.320000e-90 342
5 TraesCS7B01G433400 chr4D 88.103 311 33 2 17 326 421335210 421335517 1.970000e-97 366
6 TraesCS7B01G433400 chr2B 87.821 312 35 2 24 335 380498159 380498467 2.550000e-96 363
7 TraesCS7B01G433400 chr2A 87.829 304 34 3 24 326 223718614 223718915 1.530000e-93 353
8 TraesCS7B01G433400 chr2A 87.582 306 34 3 24 328 57446296 57446598 5.520000e-93 351
9 TraesCS7B01G433400 chr4B 87.171 304 37 2 24 326 396703708 396704010 9.240000e-91 344
10 TraesCS7B01G433400 chr5A 86.624 314 36 5 24 336 656675626 656675318 3.320000e-90 342
11 TraesCS7B01G433400 chr1D 86.928 306 36 3 24 328 411904897 411905199 1.190000e-89 340
12 TraesCS7B01G433400 chr1D 87.213 305 32 6 24 326 425101371 425101670 1.190000e-89 340


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G433400 chr7B 700825956 700829431 3475 False 6420.0 6420 100.0000 1 3476 1 chr7B.!!$F1 3475
1 TraesCS7B01G433400 chr7A 701527973 701530838 2865 False 3548.0 3548 89.1950 592 3476 1 chr7A.!!$F1 2884
2 TraesCS7B01G433400 chr7D 611590389 611593418 3029 False 1931.5 3467 92.1575 455 3473 2 chr7D.!!$F2 3018

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
208 209 0.034089 GCACTTAGCTCATTGGGGGT 60.034 55.0 0.0 0.0 41.15 4.95 F
345 346 0.172578 TGGACGTATGGTCTTCGCAG 59.827 55.0 0.0 0.0 45.35 5.18 F
346 347 0.454600 GGACGTATGGTCTTCGCAGA 59.545 55.0 0.0 0.0 45.35 4.26 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2025 2076 0.868406 CCTTGTCGAAGTTGGTGAGC 59.132 55.000 0.0 0.0 0.00 4.26 R
2334 2385 1.651240 CCTTGTCCAGCCTCAATGCG 61.651 60.000 0.0 0.0 36.02 4.73 R
2496 2547 5.368989 ACAAGCCCTACAAATATAGCTCAC 58.631 41.667 0.0 0.0 0.00 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.513406 ACTCAAGGTTCCACCAAAGTAA 57.487 40.909 0.00 0.00 41.95 2.24
22 23 4.204799 ACTCAAGGTTCCACCAAAGTAAC 58.795 43.478 0.00 0.00 41.95 2.50
23 24 3.558033 TCAAGGTTCCACCAAAGTAACC 58.442 45.455 0.00 0.00 41.95 2.85
24 25 2.626266 CAAGGTTCCACCAAAGTAACCC 59.374 50.000 0.00 0.00 41.95 4.11
25 26 1.146359 AGGTTCCACCAAAGTAACCCC 59.854 52.381 0.00 0.00 41.95 4.95
26 27 1.146359 GGTTCCACCAAAGTAACCCCT 59.854 52.381 0.00 0.00 38.42 4.79
27 28 2.511659 GTTCCACCAAAGTAACCCCTC 58.488 52.381 0.00 0.00 0.00 4.30
28 29 1.069775 TCCACCAAAGTAACCCCTCC 58.930 55.000 0.00 0.00 0.00 4.30
29 30 0.774908 CCACCAAAGTAACCCCTCCA 59.225 55.000 0.00 0.00 0.00 3.86
30 31 1.357761 CCACCAAAGTAACCCCTCCAT 59.642 52.381 0.00 0.00 0.00 3.41
31 32 2.620627 CCACCAAAGTAACCCCTCCATC 60.621 54.545 0.00 0.00 0.00 3.51
32 33 1.639108 ACCAAAGTAACCCCTCCATCC 59.361 52.381 0.00 0.00 0.00 3.51
33 34 1.408266 CCAAAGTAACCCCTCCATCCG 60.408 57.143 0.00 0.00 0.00 4.18
34 35 0.916809 AAAGTAACCCCTCCATCCGG 59.083 55.000 0.00 0.00 0.00 5.14
35 36 0.253020 AAGTAACCCCTCCATCCGGT 60.253 55.000 0.00 0.00 0.00 5.28
36 37 0.981277 AGTAACCCCTCCATCCGGTG 60.981 60.000 0.00 0.00 0.00 4.94
37 38 0.979187 GTAACCCCTCCATCCGGTGA 60.979 60.000 0.00 0.00 0.00 4.02
38 39 0.252789 TAACCCCTCCATCCGGTGAA 60.253 55.000 0.00 0.00 0.00 3.18
39 40 1.137594 AACCCCTCCATCCGGTGAAA 61.138 55.000 0.00 0.00 0.00 2.69
40 41 1.137594 ACCCCTCCATCCGGTGAAAA 61.138 55.000 0.00 0.00 0.00 2.29
41 42 0.394352 CCCCTCCATCCGGTGAAAAG 60.394 60.000 0.00 0.00 0.00 2.27
42 43 0.328258 CCCTCCATCCGGTGAAAAGT 59.672 55.000 0.00 0.00 0.00 2.66
43 44 1.453155 CCTCCATCCGGTGAAAAGTG 58.547 55.000 0.00 0.00 0.00 3.16
44 45 1.271379 CCTCCATCCGGTGAAAAGTGT 60.271 52.381 0.00 0.00 0.00 3.55
45 46 2.027561 CCTCCATCCGGTGAAAAGTGTA 60.028 50.000 0.00 0.00 0.00 2.90
46 47 3.262420 CTCCATCCGGTGAAAAGTGTAG 58.738 50.000 0.00 0.00 0.00 2.74
47 48 2.027561 TCCATCCGGTGAAAAGTGTAGG 60.028 50.000 0.00 0.00 0.00 3.18
48 49 2.290071 CCATCCGGTGAAAAGTGTAGGT 60.290 50.000 0.00 0.00 0.00 3.08
49 50 3.408634 CATCCGGTGAAAAGTGTAGGTT 58.591 45.455 0.00 0.00 0.00 3.50
50 51 3.564053 TCCGGTGAAAAGTGTAGGTTT 57.436 42.857 0.00 0.00 0.00 3.27
51 52 3.207778 TCCGGTGAAAAGTGTAGGTTTG 58.792 45.455 0.00 0.00 0.00 2.93
52 53 2.292292 CCGGTGAAAAGTGTAGGTTTGG 59.708 50.000 0.00 0.00 0.00 3.28
53 54 2.287368 CGGTGAAAAGTGTAGGTTTGGC 60.287 50.000 0.00 0.00 0.00 4.52
54 55 2.956333 GGTGAAAAGTGTAGGTTTGGCT 59.044 45.455 0.00 0.00 0.00 4.75
55 56 3.383505 GGTGAAAAGTGTAGGTTTGGCTT 59.616 43.478 0.00 0.00 0.00 4.35
56 57 4.142026 GGTGAAAAGTGTAGGTTTGGCTTT 60.142 41.667 0.00 0.00 0.00 3.51
57 58 5.068067 GGTGAAAAGTGTAGGTTTGGCTTTA 59.932 40.000 0.00 0.00 0.00 1.85
58 59 6.406065 GGTGAAAAGTGTAGGTTTGGCTTTAA 60.406 38.462 0.00 0.00 0.00 1.52
59 60 7.036829 GTGAAAAGTGTAGGTTTGGCTTTAAA 58.963 34.615 0.00 0.00 0.00 1.52
60 61 7.546316 GTGAAAAGTGTAGGTTTGGCTTTAAAA 59.454 33.333 0.00 0.00 0.00 1.52
61 62 8.261522 TGAAAAGTGTAGGTTTGGCTTTAAAAT 58.738 29.630 0.00 0.00 0.00 1.82
62 63 9.104965 GAAAAGTGTAGGTTTGGCTTTAAAATT 57.895 29.630 0.00 0.00 0.00 1.82
63 64 9.456147 AAAAGTGTAGGTTTGGCTTTAAAATTT 57.544 25.926 0.00 0.00 0.00 1.82
64 65 8.432110 AAGTGTAGGTTTGGCTTTAAAATTTG 57.568 30.769 0.00 0.00 0.00 2.32
65 66 6.481976 AGTGTAGGTTTGGCTTTAAAATTTGC 59.518 34.615 0.00 0.00 0.00 3.68
66 67 5.760743 TGTAGGTTTGGCTTTAAAATTTGCC 59.239 36.000 9.72 9.72 45.10 4.52
67 68 4.141287 AGGTTTGGCTTTAAAATTTGCCC 58.859 39.130 13.14 0.66 44.32 5.36
68 69 3.885901 GGTTTGGCTTTAAAATTTGCCCA 59.114 39.130 13.14 1.64 44.32 5.36
69 70 4.261405 GGTTTGGCTTTAAAATTTGCCCAC 60.261 41.667 13.14 10.09 44.32 4.61
70 71 3.845781 TGGCTTTAAAATTTGCCCACA 57.154 38.095 13.14 0.00 44.32 4.17
71 72 4.156455 TGGCTTTAAAATTTGCCCACAA 57.844 36.364 13.14 0.00 44.32 3.33
82 83 3.290948 TTGCCCACAAAAGAGTGTACT 57.709 42.857 0.00 0.00 37.82 2.73
83 84 3.290948 TGCCCACAAAAGAGTGTACTT 57.709 42.857 0.00 0.00 37.82 2.24
84 85 3.211045 TGCCCACAAAAGAGTGTACTTC 58.789 45.455 0.00 0.00 37.82 3.01
85 86 2.552743 GCCCACAAAAGAGTGTACTTCC 59.447 50.000 0.00 0.00 37.82 3.46
86 87 3.815809 CCCACAAAAGAGTGTACTTCCA 58.184 45.455 0.00 0.00 37.82 3.53
87 88 4.398319 CCCACAAAAGAGTGTACTTCCAT 58.602 43.478 0.00 0.00 37.82 3.41
88 89 4.455877 CCCACAAAAGAGTGTACTTCCATC 59.544 45.833 0.00 0.00 37.82 3.51
89 90 5.308825 CCACAAAAGAGTGTACTTCCATCT 58.691 41.667 0.00 0.00 37.82 2.90
90 91 5.765182 CCACAAAAGAGTGTACTTCCATCTT 59.235 40.000 0.00 0.00 37.82 2.40
91 92 6.073003 CCACAAAAGAGTGTACTTCCATCTTC 60.073 42.308 0.00 0.00 37.82 2.87
92 93 6.708054 CACAAAAGAGTGTACTTCCATCTTCT 59.292 38.462 0.00 0.00 34.83 2.85
93 94 6.931840 ACAAAAGAGTGTACTTCCATCTTCTC 59.068 38.462 0.00 0.00 30.16 2.87
94 95 6.672266 AAAGAGTGTACTTCCATCTTCTCA 57.328 37.500 0.00 0.00 30.16 3.27
95 96 6.672266 AAGAGTGTACTTCCATCTTCTCAA 57.328 37.500 0.00 0.00 0.00 3.02
96 97 6.865834 AGAGTGTACTTCCATCTTCTCAAT 57.134 37.500 0.00 0.00 0.00 2.57
97 98 6.638610 AGAGTGTACTTCCATCTTCTCAATG 58.361 40.000 0.00 0.00 0.00 2.82
98 99 5.181748 AGTGTACTTCCATCTTCTCAATGC 58.818 41.667 0.00 0.00 0.00 3.56
99 100 4.937620 GTGTACTTCCATCTTCTCAATGCA 59.062 41.667 0.00 0.00 0.00 3.96
100 101 4.937620 TGTACTTCCATCTTCTCAATGCAC 59.062 41.667 0.00 0.00 0.00 4.57
101 102 4.298103 ACTTCCATCTTCTCAATGCACT 57.702 40.909 0.00 0.00 0.00 4.40
102 103 4.660168 ACTTCCATCTTCTCAATGCACTT 58.340 39.130 0.00 0.00 0.00 3.16
103 104 5.075493 ACTTCCATCTTCTCAATGCACTTT 58.925 37.500 0.00 0.00 0.00 2.66
104 105 6.240894 ACTTCCATCTTCTCAATGCACTTTA 58.759 36.000 0.00 0.00 0.00 1.85
105 106 6.716628 ACTTCCATCTTCTCAATGCACTTTAA 59.283 34.615 0.00 0.00 0.00 1.52
106 107 7.231317 ACTTCCATCTTCTCAATGCACTTTAAA 59.769 33.333 0.00 0.00 0.00 1.52
107 108 7.149569 TCCATCTTCTCAATGCACTTTAAAG 57.850 36.000 13.76 13.76 0.00 1.85
108 109 6.716628 TCCATCTTCTCAATGCACTTTAAAGT 59.283 34.615 15.22 15.22 40.60 2.66
109 110 7.882791 TCCATCTTCTCAATGCACTTTAAAGTA 59.117 33.333 20.15 6.90 37.08 2.24
110 111 8.180267 CCATCTTCTCAATGCACTTTAAAGTAG 58.820 37.037 20.15 12.86 37.08 2.57
111 112 7.672983 TCTTCTCAATGCACTTTAAAGTAGG 57.327 36.000 20.15 10.52 37.08 3.18
112 113 7.450074 TCTTCTCAATGCACTTTAAAGTAGGA 58.550 34.615 20.15 15.36 37.08 2.94
113 114 7.936847 TCTTCTCAATGCACTTTAAAGTAGGAA 59.063 33.333 20.15 13.84 37.08 3.36
114 115 8.458573 TTCTCAATGCACTTTAAAGTAGGAAA 57.541 30.769 20.15 5.49 37.08 3.13
115 116 8.458573 TCTCAATGCACTTTAAAGTAGGAAAA 57.541 30.769 20.15 5.24 37.08 2.29
116 117 8.908903 TCTCAATGCACTTTAAAGTAGGAAAAA 58.091 29.630 20.15 3.90 37.08 1.94
138 139 5.368256 AAAATGCTTGTCTCTCATCACAC 57.632 39.130 0.00 0.00 0.00 3.82
139 140 2.070262 TGCTTGTCTCTCATCACACG 57.930 50.000 0.00 0.00 0.00 4.49
140 141 1.337167 TGCTTGTCTCTCATCACACGG 60.337 52.381 0.00 0.00 0.00 4.94
141 142 1.337260 GCTTGTCTCTCATCACACGGT 60.337 52.381 0.00 0.00 0.00 4.83
142 143 2.094700 GCTTGTCTCTCATCACACGGTA 60.095 50.000 0.00 0.00 0.00 4.02
143 144 3.614150 GCTTGTCTCTCATCACACGGTAA 60.614 47.826 0.00 0.00 0.00 2.85
144 145 4.748892 CTTGTCTCTCATCACACGGTAAT 58.251 43.478 0.00 0.00 0.00 1.89
145 146 4.371855 TGTCTCTCATCACACGGTAATC 57.628 45.455 0.00 0.00 0.00 1.75
146 147 3.761752 TGTCTCTCATCACACGGTAATCA 59.238 43.478 0.00 0.00 0.00 2.57
147 148 4.219725 TGTCTCTCATCACACGGTAATCAA 59.780 41.667 0.00 0.00 0.00 2.57
148 149 4.800993 GTCTCTCATCACACGGTAATCAAG 59.199 45.833 0.00 0.00 0.00 3.02
149 150 4.115516 CTCTCATCACACGGTAATCAAGG 58.884 47.826 0.00 0.00 0.00 3.61
150 151 2.609459 CTCATCACACGGTAATCAAGGC 59.391 50.000 0.00 0.00 0.00 4.35
151 152 2.236146 TCATCACACGGTAATCAAGGCT 59.764 45.455 0.00 0.00 0.00 4.58
152 153 3.449377 TCATCACACGGTAATCAAGGCTA 59.551 43.478 0.00 0.00 0.00 3.93
153 154 3.965379 TCACACGGTAATCAAGGCTAA 57.035 42.857 0.00 0.00 0.00 3.09
154 155 3.592059 TCACACGGTAATCAAGGCTAAC 58.408 45.455 0.00 0.00 0.00 2.34
155 156 3.007074 TCACACGGTAATCAAGGCTAACA 59.993 43.478 0.00 0.00 0.00 2.41
156 157 3.370978 CACACGGTAATCAAGGCTAACAG 59.629 47.826 0.00 0.00 0.00 3.16
157 158 2.351726 CACGGTAATCAAGGCTAACAGC 59.648 50.000 0.00 0.00 41.46 4.40
158 159 2.027561 ACGGTAATCAAGGCTAACAGCA 60.028 45.455 0.00 0.00 44.75 4.41
159 160 2.609459 CGGTAATCAAGGCTAACAGCAG 59.391 50.000 0.00 0.00 44.75 4.24
160 161 3.610911 GGTAATCAAGGCTAACAGCAGT 58.389 45.455 0.00 0.00 44.75 4.40
161 162 3.623510 GGTAATCAAGGCTAACAGCAGTC 59.376 47.826 0.00 0.00 44.75 3.51
162 163 3.710209 AATCAAGGCTAACAGCAGTCT 57.290 42.857 0.00 0.00 44.75 3.24
163 164 4.826274 AATCAAGGCTAACAGCAGTCTA 57.174 40.909 0.00 0.00 44.75 2.59
164 165 3.594603 TCAAGGCTAACAGCAGTCTAC 57.405 47.619 0.00 0.00 44.75 2.59
165 166 2.094700 TCAAGGCTAACAGCAGTCTACG 60.095 50.000 0.00 0.00 44.75 3.51
166 167 0.173708 AGGCTAACAGCAGTCTACGC 59.826 55.000 0.00 0.00 44.75 4.42
167 168 0.108804 GGCTAACAGCAGTCTACGCA 60.109 55.000 0.00 0.00 44.75 5.24
168 169 1.471676 GGCTAACAGCAGTCTACGCAT 60.472 52.381 0.00 0.00 44.75 4.73
169 170 1.590238 GCTAACAGCAGTCTACGCATG 59.410 52.381 0.00 0.00 41.89 4.06
170 171 2.196749 CTAACAGCAGTCTACGCATGG 58.803 52.381 0.00 0.00 0.00 3.66
171 172 0.321671 AACAGCAGTCTACGCATGGT 59.678 50.000 0.00 0.00 0.00 3.55
172 173 0.108615 ACAGCAGTCTACGCATGGTC 60.109 55.000 0.00 0.00 0.00 4.02
173 174 0.174389 CAGCAGTCTACGCATGGTCT 59.826 55.000 0.00 0.00 0.00 3.85
174 175 0.457851 AGCAGTCTACGCATGGTCTC 59.542 55.000 0.00 0.00 0.00 3.36
175 176 0.528684 GCAGTCTACGCATGGTCTCC 60.529 60.000 0.00 0.00 0.00 3.71
176 177 1.107114 CAGTCTACGCATGGTCTCCT 58.893 55.000 0.00 0.00 0.00 3.69
177 178 1.478510 CAGTCTACGCATGGTCTCCTT 59.521 52.381 0.00 0.00 0.00 3.36
178 179 2.688446 CAGTCTACGCATGGTCTCCTTA 59.312 50.000 0.00 0.00 0.00 2.69
179 180 2.952978 AGTCTACGCATGGTCTCCTTAG 59.047 50.000 0.00 0.00 0.00 2.18
180 181 2.688958 GTCTACGCATGGTCTCCTTAGT 59.311 50.000 0.00 0.00 0.00 2.24
181 182 3.130693 GTCTACGCATGGTCTCCTTAGTT 59.869 47.826 0.00 0.00 0.00 2.24
182 183 3.767673 TCTACGCATGGTCTCCTTAGTTT 59.232 43.478 0.00 0.00 0.00 2.66
183 184 2.973945 ACGCATGGTCTCCTTAGTTTC 58.026 47.619 0.00 0.00 0.00 2.78
184 185 2.567615 ACGCATGGTCTCCTTAGTTTCT 59.432 45.455 0.00 0.00 0.00 2.52
185 186 2.932614 CGCATGGTCTCCTTAGTTTCTG 59.067 50.000 0.00 0.00 0.00 3.02
186 187 2.680339 GCATGGTCTCCTTAGTTTCTGC 59.320 50.000 0.00 0.00 0.00 4.26
187 188 3.869912 GCATGGTCTCCTTAGTTTCTGCA 60.870 47.826 0.00 0.00 0.00 4.41
188 189 4.521146 CATGGTCTCCTTAGTTTCTGCAT 58.479 43.478 0.00 0.00 0.00 3.96
189 190 3.942829 TGGTCTCCTTAGTTTCTGCATG 58.057 45.455 0.00 0.00 0.00 4.06
190 191 2.680339 GGTCTCCTTAGTTTCTGCATGC 59.320 50.000 11.82 11.82 0.00 4.06
191 192 3.338249 GTCTCCTTAGTTTCTGCATGCA 58.662 45.455 21.29 21.29 0.00 3.96
192 193 3.126000 GTCTCCTTAGTTTCTGCATGCAC 59.874 47.826 18.46 7.15 0.00 4.57
193 194 3.008375 TCTCCTTAGTTTCTGCATGCACT 59.992 43.478 18.46 14.94 0.00 4.40
194 195 3.754965 TCCTTAGTTTCTGCATGCACTT 58.245 40.909 18.46 3.15 0.00 3.16
195 196 4.905429 TCCTTAGTTTCTGCATGCACTTA 58.095 39.130 18.46 5.42 0.00 2.24
196 197 4.937620 TCCTTAGTTTCTGCATGCACTTAG 59.062 41.667 18.46 14.74 0.00 2.18
197 198 4.437930 CCTTAGTTTCTGCATGCACTTAGC 60.438 45.833 18.46 6.97 45.96 3.09
198 199 2.787994 AGTTTCTGCATGCACTTAGCT 58.212 42.857 18.46 9.23 45.94 3.32
199 200 2.746362 AGTTTCTGCATGCACTTAGCTC 59.254 45.455 18.46 3.98 45.94 4.09
200 201 2.477845 TTCTGCATGCACTTAGCTCA 57.522 45.000 18.46 0.00 45.94 4.26
201 202 2.704464 TCTGCATGCACTTAGCTCAT 57.296 45.000 18.46 0.00 45.94 2.90
202 203 2.995283 TCTGCATGCACTTAGCTCATT 58.005 42.857 18.46 0.00 45.94 2.57
203 204 2.681344 TCTGCATGCACTTAGCTCATTG 59.319 45.455 18.46 2.23 45.94 2.82
204 205 1.746787 TGCATGCACTTAGCTCATTGG 59.253 47.619 18.46 0.00 45.94 3.16
205 206 1.066605 GCATGCACTTAGCTCATTGGG 59.933 52.381 14.21 0.00 45.94 4.12
206 207 1.679680 CATGCACTTAGCTCATTGGGG 59.320 52.381 0.00 0.00 45.94 4.96
207 208 0.034186 TGCACTTAGCTCATTGGGGG 60.034 55.000 0.00 0.00 45.94 5.40
208 209 0.034089 GCACTTAGCTCATTGGGGGT 60.034 55.000 0.00 0.00 41.15 4.95
209 210 1.616994 GCACTTAGCTCATTGGGGGTT 60.617 52.381 0.00 0.00 41.15 4.11
210 211 2.094675 CACTTAGCTCATTGGGGGTTG 58.905 52.381 0.00 0.00 0.00 3.77
211 212 1.005924 ACTTAGCTCATTGGGGGTTGG 59.994 52.381 0.00 0.00 0.00 3.77
212 213 0.334676 TTAGCTCATTGGGGGTTGGG 59.665 55.000 0.00 0.00 0.00 4.12
213 214 0.849094 TAGCTCATTGGGGGTTGGGT 60.849 55.000 0.00 0.00 0.00 4.51
214 215 0.849094 AGCTCATTGGGGGTTGGGTA 60.849 55.000 0.00 0.00 0.00 3.69
215 216 0.683179 GCTCATTGGGGGTTGGGTAC 60.683 60.000 0.00 0.00 0.00 3.34
216 217 0.999712 CTCATTGGGGGTTGGGTACT 59.000 55.000 0.00 0.00 0.00 2.73
217 218 1.357761 CTCATTGGGGGTTGGGTACTT 59.642 52.381 0.00 0.00 0.00 2.24
218 219 2.578940 CTCATTGGGGGTTGGGTACTTA 59.421 50.000 0.00 0.00 0.00 2.24
219 220 2.994581 TCATTGGGGGTTGGGTACTTAA 59.005 45.455 0.00 0.00 0.00 1.85
220 221 3.401683 TCATTGGGGGTTGGGTACTTAAA 59.598 43.478 0.00 0.00 0.00 1.52
221 222 3.529216 TTGGGGGTTGGGTACTTAAAG 57.471 47.619 0.00 0.00 0.00 1.85
222 223 2.716023 TGGGGGTTGGGTACTTAAAGA 58.284 47.619 0.00 0.00 0.00 2.52
223 224 2.645797 TGGGGGTTGGGTACTTAAAGAG 59.354 50.000 0.00 0.00 0.00 2.85
224 225 2.025605 GGGGGTTGGGTACTTAAAGAGG 60.026 54.545 0.00 0.00 0.00 3.69
225 226 2.914941 GGGGTTGGGTACTTAAAGAGGA 59.085 50.000 0.00 0.00 0.00 3.71
226 227 3.054582 GGGGTTGGGTACTTAAAGAGGAG 60.055 52.174 0.00 0.00 0.00 3.69
227 228 3.842436 GGGTTGGGTACTTAAAGAGGAGA 59.158 47.826 0.00 0.00 0.00 3.71
228 229 4.081031 GGGTTGGGTACTTAAAGAGGAGAG 60.081 50.000 0.00 0.00 0.00 3.20
229 230 4.776308 GGTTGGGTACTTAAAGAGGAGAGA 59.224 45.833 0.00 0.00 0.00 3.10
230 231 5.105269 GGTTGGGTACTTAAAGAGGAGAGAG 60.105 48.000 0.00 0.00 0.00 3.20
231 232 5.531753 TGGGTACTTAAAGAGGAGAGAGA 57.468 43.478 0.00 0.00 0.00 3.10
232 233 6.093617 TGGGTACTTAAAGAGGAGAGAGAT 57.906 41.667 0.00 0.00 0.00 2.75
233 234 5.894393 TGGGTACTTAAAGAGGAGAGAGATG 59.106 44.000 0.00 0.00 0.00 2.90
234 235 5.303333 GGGTACTTAAAGAGGAGAGAGATGG 59.697 48.000 0.00 0.00 0.00 3.51
235 236 5.894964 GGTACTTAAAGAGGAGAGAGATGGT 59.105 44.000 0.00 0.00 0.00 3.55
236 237 5.930837 ACTTAAAGAGGAGAGAGATGGTG 57.069 43.478 0.00 0.00 0.00 4.17
237 238 5.584913 ACTTAAAGAGGAGAGAGATGGTGA 58.415 41.667 0.00 0.00 0.00 4.02
238 239 5.420739 ACTTAAAGAGGAGAGAGATGGTGAC 59.579 44.000 0.00 0.00 0.00 3.67
239 240 3.756082 AAGAGGAGAGAGATGGTGACT 57.244 47.619 0.00 0.00 0.00 3.41
240 241 3.756082 AGAGGAGAGAGATGGTGACTT 57.244 47.619 0.00 0.00 0.00 3.01
241 242 3.364549 AGAGGAGAGAGATGGTGACTTG 58.635 50.000 0.00 0.00 0.00 3.16
242 243 1.830477 AGGAGAGAGATGGTGACTTGC 59.170 52.381 0.00 0.00 0.00 4.01
243 244 1.552337 GGAGAGAGATGGTGACTTGCA 59.448 52.381 0.00 0.00 0.00 4.08
244 245 2.615869 GAGAGAGATGGTGACTTGCAC 58.384 52.381 0.00 0.00 46.98 4.57
254 255 3.017265 GTGACTTGCACCTTTCCAATG 57.983 47.619 0.00 0.00 41.78 2.82
255 256 1.340889 TGACTTGCACCTTTCCAATGC 59.659 47.619 0.00 0.00 39.88 3.56
260 261 3.488778 TGCACCTTTCCAATGCATTTT 57.511 38.095 9.83 0.00 44.17 1.82
261 262 3.818180 TGCACCTTTCCAATGCATTTTT 58.182 36.364 9.83 0.00 44.17 1.94
299 300 9.691362 ATAATTTGTCTTAAAATTTCTGTGCGT 57.309 25.926 0.00 0.00 39.73 5.24
301 302 7.901874 TTTGTCTTAAAATTTCTGTGCGTAC 57.098 32.000 0.00 0.00 0.00 3.67
302 303 6.606234 TGTCTTAAAATTTCTGTGCGTACA 57.394 33.333 6.10 6.10 35.08 2.90
312 313 3.721466 GTGCGTACACTTTTGACCG 57.279 52.632 0.00 0.00 43.85 4.79
313 314 0.932399 GTGCGTACACTTTTGACCGT 59.068 50.000 0.00 0.00 43.85 4.83
314 315 2.126467 GTGCGTACACTTTTGACCGTA 58.874 47.619 0.00 0.00 43.85 4.02
315 316 2.097250 GTGCGTACACTTTTGACCGTAC 60.097 50.000 0.00 0.00 43.85 3.67
318 319 3.011949 GTACACTTTTGACCGTACGGA 57.988 47.619 39.52 16.98 38.96 4.69
319 320 2.144482 ACACTTTTGACCGTACGGAG 57.856 50.000 39.52 26.86 38.96 4.63
320 321 1.269936 ACACTTTTGACCGTACGGAGG 60.270 52.381 39.52 20.12 38.96 4.30
321 322 0.319405 ACTTTTGACCGTACGGAGGG 59.681 55.000 39.52 22.45 38.96 4.30
322 323 0.390735 CTTTTGACCGTACGGAGGGG 60.391 60.000 39.52 19.11 38.96 4.79
323 324 1.829523 TTTTGACCGTACGGAGGGGG 61.830 60.000 39.52 13.35 38.96 5.40
324 325 3.528217 TTGACCGTACGGAGGGGGT 62.528 63.158 39.52 17.31 38.96 4.95
325 326 2.148723 TTGACCGTACGGAGGGGGTA 62.149 60.000 39.52 14.40 38.96 3.69
326 327 1.152673 GACCGTACGGAGGGGGTAT 60.153 63.158 39.52 15.68 38.96 2.73
327 328 1.456331 ACCGTACGGAGGGGGTATG 60.456 63.158 39.52 10.25 38.96 2.39
328 329 2.205152 CCGTACGGAGGGGGTATGG 61.205 68.421 30.64 0.00 39.82 2.74
329 330 1.152694 CGTACGGAGGGGGTATGGA 60.153 63.158 7.57 0.00 0.00 3.41
330 331 1.458639 CGTACGGAGGGGGTATGGAC 61.459 65.000 7.57 0.00 0.00 4.02
331 332 1.152694 TACGGAGGGGGTATGGACG 60.153 63.158 0.00 0.00 0.00 4.79
332 333 1.936767 TACGGAGGGGGTATGGACGT 61.937 60.000 0.00 0.00 36.93 4.34
333 334 1.152694 CGGAGGGGGTATGGACGTA 60.153 63.158 0.00 0.00 0.00 3.57
334 335 0.541296 CGGAGGGGGTATGGACGTAT 60.541 60.000 0.00 0.00 0.00 3.06
335 336 0.974383 GGAGGGGGTATGGACGTATG 59.026 60.000 0.00 0.00 0.00 2.39
336 337 0.974383 GAGGGGGTATGGACGTATGG 59.026 60.000 0.00 0.00 0.00 2.74
337 338 0.266753 AGGGGGTATGGACGTATGGT 59.733 55.000 0.00 0.00 0.00 3.55
338 339 0.683412 GGGGGTATGGACGTATGGTC 59.317 60.000 0.00 0.00 45.31 4.02
339 340 1.713297 GGGGTATGGACGTATGGTCT 58.287 55.000 0.00 0.00 45.35 3.85
340 341 2.044758 GGGGTATGGACGTATGGTCTT 58.955 52.381 0.00 0.00 45.35 3.01
341 342 2.036862 GGGGTATGGACGTATGGTCTTC 59.963 54.545 0.00 0.00 45.35 2.87
342 343 2.288030 GGGTATGGACGTATGGTCTTCG 60.288 54.545 0.00 0.00 45.35 3.79
343 344 2.391879 GTATGGACGTATGGTCTTCGC 58.608 52.381 0.00 0.00 45.35 4.70
344 345 0.821517 ATGGACGTATGGTCTTCGCA 59.178 50.000 0.00 0.00 45.35 5.10
345 346 0.172578 TGGACGTATGGTCTTCGCAG 59.827 55.000 0.00 0.00 45.35 5.18
346 347 0.454600 GGACGTATGGTCTTCGCAGA 59.545 55.000 0.00 0.00 45.35 4.26
347 348 1.135199 GGACGTATGGTCTTCGCAGAA 60.135 52.381 0.00 0.00 45.35 3.02
348 349 2.186076 GACGTATGGTCTTCGCAGAAG 58.814 52.381 10.75 10.75 42.62 2.85
349 350 1.816835 ACGTATGGTCTTCGCAGAAGA 59.183 47.619 14.32 14.32 45.90 2.87
350 351 2.230508 ACGTATGGTCTTCGCAGAAGAA 59.769 45.455 18.24 8.25 45.90 2.52
351 352 3.250744 CGTATGGTCTTCGCAGAAGAAA 58.749 45.455 18.24 12.27 45.90 2.52
352 353 3.678072 CGTATGGTCTTCGCAGAAGAAAA 59.322 43.478 18.24 12.01 45.90 2.29
353 354 4.151689 CGTATGGTCTTCGCAGAAGAAAAA 59.848 41.667 18.24 10.18 45.90 1.94
354 355 4.756084 ATGGTCTTCGCAGAAGAAAAAG 57.244 40.909 18.24 0.00 45.90 2.27
355 356 2.290641 TGGTCTTCGCAGAAGAAAAAGC 59.709 45.455 18.24 9.78 45.90 3.51
356 357 2.290641 GGTCTTCGCAGAAGAAAAAGCA 59.709 45.455 18.24 0.00 45.90 3.91
357 358 3.057946 GGTCTTCGCAGAAGAAAAAGCAT 60.058 43.478 18.24 0.00 45.90 3.79
358 359 4.540824 GTCTTCGCAGAAGAAAAAGCATT 58.459 39.130 18.24 0.00 45.90 3.56
359 360 5.334879 GGTCTTCGCAGAAGAAAAAGCATTA 60.335 40.000 18.24 0.00 45.90 1.90
360 361 6.142817 GTCTTCGCAGAAGAAAAAGCATTAA 58.857 36.000 18.24 0.00 45.90 1.40
361 362 6.636850 GTCTTCGCAGAAGAAAAAGCATTAAA 59.363 34.615 18.24 0.00 45.90 1.52
362 363 7.167468 GTCTTCGCAGAAGAAAAAGCATTAAAA 59.833 33.333 18.24 0.00 45.90 1.52
363 364 7.704472 TCTTCGCAGAAGAAAAAGCATTAAAAA 59.296 29.630 15.48 0.00 45.90 1.94
384 385 3.769739 AAATCTGCTATGATACCCGCA 57.230 42.857 0.00 0.00 0.00 5.69
385 386 3.769739 AATCTGCTATGATACCCGCAA 57.230 42.857 0.00 0.00 31.24 4.85
386 387 3.769739 ATCTGCTATGATACCCGCAAA 57.230 42.857 0.00 0.00 31.24 3.68
387 388 3.552132 TCTGCTATGATACCCGCAAAA 57.448 42.857 0.00 0.00 31.24 2.44
388 389 3.879998 TCTGCTATGATACCCGCAAAAA 58.120 40.909 0.00 0.00 31.24 1.94
408 409 3.538634 AAAATGCCTCTACGGTCTACC 57.461 47.619 0.00 0.00 34.25 3.18
409 410 1.411041 AATGCCTCTACGGTCTACCC 58.589 55.000 0.00 0.00 34.25 3.69
418 419 2.103736 GGTCTACCCGCGTGCTAC 59.896 66.667 4.92 0.00 0.00 3.58
419 420 2.703798 GGTCTACCCGCGTGCTACA 61.704 63.158 4.92 0.00 0.00 2.74
420 421 1.226603 GTCTACCCGCGTGCTACAG 60.227 63.158 4.92 0.00 0.00 2.74
421 422 1.676635 TCTACCCGCGTGCTACAGT 60.677 57.895 4.92 0.00 0.00 3.55
422 423 1.516386 CTACCCGCGTGCTACAGTG 60.516 63.158 4.92 0.00 0.00 3.66
423 424 2.884087 CTACCCGCGTGCTACAGTGG 62.884 65.000 4.92 0.00 37.74 4.00
427 428 4.735132 GCGTGCTACAGTGGCGGA 62.735 66.667 4.21 0.00 0.00 5.54
428 429 2.809601 CGTGCTACAGTGGCGGAC 60.810 66.667 4.21 0.00 0.00 4.79
429 430 2.434359 GTGCTACAGTGGCGGACC 60.434 66.667 4.21 0.00 0.00 4.46
430 431 3.702048 TGCTACAGTGGCGGACCC 61.702 66.667 4.21 0.00 33.59 4.46
431 432 4.468689 GCTACAGTGGCGGACCCC 62.469 72.222 0.00 0.00 33.59 4.95
478 479 4.885270 CCCCACGTGGTTGGTGCA 62.885 66.667 31.80 0.00 34.44 4.57
482 483 3.804329 ACGTGGTTGGTGCACCCT 61.804 61.111 32.62 3.65 35.73 4.34
483 484 3.286751 CGTGGTTGGTGCACCCTG 61.287 66.667 32.62 12.04 35.73 4.45
509 510 8.647226 GCTTTACGAGTAGGAATTAACGTAAAA 58.353 33.333 18.15 0.00 46.91 1.52
518 519 4.794762 GGAATTAACGTAAAATTGACCCGC 59.205 41.667 12.14 0.00 0.00 6.13
548 549 1.590259 GCATCGCGTCCTCTTCCTC 60.590 63.158 5.77 0.00 0.00 3.71
551 552 3.839432 CGCGTCCTCTTCCTCCCC 61.839 72.222 0.00 0.00 0.00 4.81
552 553 3.471806 GCGTCCTCTTCCTCCCCC 61.472 72.222 0.00 0.00 0.00 5.40
570 575 0.881796 CCGAAGAAAGGGAAGCAACC 59.118 55.000 0.00 0.00 0.00 3.77
625 639 3.065940 TCCCTCCAATCCATCCATCAAT 58.934 45.455 0.00 0.00 0.00 2.57
629 643 4.510386 CCTCCAATCCATCCATCAATCCAT 60.510 45.833 0.00 0.00 0.00 3.41
630 644 4.669700 TCCAATCCATCCATCAATCCATC 58.330 43.478 0.00 0.00 0.00 3.51
631 645 3.767673 CCAATCCATCCATCAATCCATCC 59.232 47.826 0.00 0.00 0.00 3.51
632 646 4.412843 CAATCCATCCATCAATCCATCCA 58.587 43.478 0.00 0.00 0.00 3.41
646 660 4.731853 TCCACCCCCAGCGATCCA 62.732 66.667 0.00 0.00 0.00 3.41
650 664 2.429058 CCCCCAGCGATCCATCTG 59.571 66.667 0.00 0.00 0.00 2.90
658 672 2.356793 GATCCATCTGCCTCGCCG 60.357 66.667 0.00 0.00 0.00 6.46
743 789 0.727398 CGCCAAGAACCGAGATTTCC 59.273 55.000 0.00 0.00 0.00 3.13
744 790 0.727398 GCCAAGAACCGAGATTTCCG 59.273 55.000 0.00 0.00 0.00 4.30
745 791 1.944430 GCCAAGAACCGAGATTTCCGT 60.944 52.381 0.00 0.00 0.00 4.69
746 792 1.732259 CCAAGAACCGAGATTTCCGTG 59.268 52.381 0.00 0.00 0.00 4.94
747 793 2.611971 CCAAGAACCGAGATTTCCGTGA 60.612 50.000 0.00 0.00 0.00 4.35
748 794 2.656560 AGAACCGAGATTTCCGTGAG 57.343 50.000 0.00 0.00 0.00 3.51
749 795 2.168496 AGAACCGAGATTTCCGTGAGA 58.832 47.619 0.00 0.00 0.00 3.27
750 796 2.761208 AGAACCGAGATTTCCGTGAGAT 59.239 45.455 0.00 0.00 0.00 2.75
751 797 3.195825 AGAACCGAGATTTCCGTGAGATT 59.804 43.478 0.00 0.00 0.00 2.40
752 798 3.611766 ACCGAGATTTCCGTGAGATTT 57.388 42.857 0.00 0.00 0.00 2.17
755 801 2.535984 CGAGATTTCCGTGAGATTTCCG 59.464 50.000 0.00 0.00 0.00 4.30
815 861 2.766400 CGTGAGGTCTCTCCGGCTC 61.766 68.421 0.00 0.00 41.99 4.70
858 905 2.440247 CCCCTTGTGCGGAATCCC 60.440 66.667 0.00 0.00 0.00 3.85
885 935 3.878667 GAGGAGGGGATTGGGCGG 61.879 72.222 0.00 0.00 0.00 6.13
886 936 4.431524 AGGAGGGGATTGGGCGGA 62.432 66.667 0.00 0.00 0.00 5.54
1059 1110 2.125391 GCCATCGAGCTGCAGTCA 60.125 61.111 16.64 3.77 0.00 3.41
1060 1111 1.742880 GCCATCGAGCTGCAGTCAA 60.743 57.895 16.64 0.00 0.00 3.18
1061 1112 1.703438 GCCATCGAGCTGCAGTCAAG 61.703 60.000 16.64 4.98 0.00 3.02
1096 1147 2.045045 CCAAATCTGGCGCCTCCA 60.045 61.111 29.70 11.78 44.18 3.86
1244 1295 4.153330 GGAGGGCTCGGGGGTCTA 62.153 72.222 0.00 0.00 0.00 2.59
1360 1411 2.111878 CCATCCTCGTCATGGGGC 59.888 66.667 0.00 0.00 37.71 5.80
1362 1413 1.070445 CATCCTCGTCATGGGGCTC 59.930 63.158 0.00 0.00 0.00 4.70
1626 1677 2.777969 CAGGCTGCTCATCCTGTTC 58.222 57.895 0.00 0.00 43.66 3.18
1632 1683 0.532573 TGCTCATCCTGTTCGTCCTC 59.467 55.000 0.00 0.00 0.00 3.71
1647 1698 2.805353 CTCGTGGTGTTCCTCGCG 60.805 66.667 0.00 0.00 46.27 5.87
1692 1743 3.691744 CTCGCTGAGCCTGTCGTCC 62.692 68.421 0.00 0.00 0.00 4.79
1746 1797 2.580470 CGTCTCGTGCATGATCGCC 61.580 63.158 9.53 0.00 0.00 5.54
1929 1980 2.412089 GACGCCTCAGAACATGTACAAC 59.588 50.000 0.00 0.00 0.00 3.32
1933 1984 2.661675 CCTCAGAACATGTACAACGTCG 59.338 50.000 0.00 0.00 0.00 5.12
2022 2073 2.175322 GACGACACCGAGTCCGAC 59.825 66.667 0.00 0.00 44.66 4.79
2025 2076 2.126965 GACACCGAGTCCGACGTG 60.127 66.667 0.00 4.14 41.56 4.49
2069 2120 1.648467 GGGATCAAGTTCAGCACGGC 61.648 60.000 0.00 0.00 0.00 5.68
2166 2217 3.916392 GACGGTGGACTCGCTGGTG 62.916 68.421 0.00 0.00 34.22 4.17
2172 2223 2.432628 GACTCGCTGGTGTTCGGG 60.433 66.667 0.00 0.00 0.00 5.14
2334 2385 2.046285 CATGTTCCCCGCCCTTGTC 61.046 63.158 0.00 0.00 0.00 3.18
2518 2569 4.757149 GGTGAGCTATATTTGTAGGGCTTG 59.243 45.833 0.00 0.00 0.00 4.01
2526 2577 8.936864 GCTATATTTGTAGGGCTTGTTATACAG 58.063 37.037 0.00 0.00 30.39 2.74
2529 2580 6.614694 TTTGTAGGGCTTGTTATACAGAGA 57.385 37.500 0.00 0.00 30.39 3.10
2651 2710 2.231964 CAGGGTTGTTTCATGGGTGATG 59.768 50.000 0.00 0.00 33.56 3.07
2688 2747 3.964031 TGGTGGGCATTCTTGTACTTTTT 59.036 39.130 0.00 0.00 0.00 1.94
2742 2801 8.712228 TGATCTTCTGCTTGTCCTTAGATATA 57.288 34.615 0.00 0.00 0.00 0.86
2743 2802 9.319060 TGATCTTCTGCTTGTCCTTAGATATAT 57.681 33.333 0.00 0.00 0.00 0.86
2785 2848 2.541999 GGTCTACTTTCTGATCGAGGCG 60.542 54.545 0.00 0.00 0.00 5.52
2788 2851 1.153568 CTTTCTGATCGAGGCGGCA 60.154 57.895 13.08 0.00 0.00 5.69
2954 3017 6.915544 TGTATCTTTGTCATTCTGATCTGC 57.084 37.500 0.00 0.00 0.00 4.26
2955 3018 6.647229 TGTATCTTTGTCATTCTGATCTGCT 58.353 36.000 0.00 0.00 0.00 4.24
2956 3019 6.537660 TGTATCTTTGTCATTCTGATCTGCTG 59.462 38.462 0.00 0.00 0.00 4.41
2957 3020 4.259356 TCTTTGTCATTCTGATCTGCTGG 58.741 43.478 0.00 0.00 0.00 4.85
2958 3021 3.986996 TTGTCATTCTGATCTGCTGGA 57.013 42.857 0.00 0.00 0.00 3.86
2959 3022 3.538634 TGTCATTCTGATCTGCTGGAG 57.461 47.619 0.00 0.00 0.00 3.86
2960 3023 2.211806 GTCATTCTGATCTGCTGGAGC 58.788 52.381 0.00 0.00 42.50 4.70
2961 3024 2.117051 TCATTCTGATCTGCTGGAGCT 58.883 47.619 0.00 0.00 42.66 4.09
2962 3025 2.504585 TCATTCTGATCTGCTGGAGCTT 59.495 45.455 0.00 0.00 42.66 3.74
2963 3026 2.398252 TTCTGATCTGCTGGAGCTTG 57.602 50.000 0.00 0.00 42.66 4.01
2964 3027 1.273759 TCTGATCTGCTGGAGCTTGT 58.726 50.000 0.00 0.00 42.66 3.16
2965 3028 1.206610 TCTGATCTGCTGGAGCTTGTC 59.793 52.381 0.00 0.00 42.66 3.18
2966 3029 0.978907 TGATCTGCTGGAGCTTGTCA 59.021 50.000 0.00 0.00 42.66 3.58
2967 3030 1.558294 TGATCTGCTGGAGCTTGTCAT 59.442 47.619 0.00 0.00 42.66 3.06
2968 3031 2.026542 TGATCTGCTGGAGCTTGTCATT 60.027 45.455 0.00 0.00 42.66 2.57
2969 3032 2.105006 TCTGCTGGAGCTTGTCATTC 57.895 50.000 0.00 0.00 42.66 2.67
2970 3033 1.093159 CTGCTGGAGCTTGTCATTCC 58.907 55.000 0.00 0.00 42.66 3.01
2971 3034 0.401356 TGCTGGAGCTTGTCATTCCA 59.599 50.000 0.00 0.00 42.66 3.53
2994 3057 7.445121 CCAACTCTGGATATTCTTGCAGTATA 58.555 38.462 0.00 0.00 46.92 1.47
3056 3119 7.872113 ACAGACAGATTTGAGAAAGAGTTTT 57.128 32.000 0.00 0.00 0.00 2.43
3083 3146 6.476706 TCTGATACAGATGTTTATGTGCTTCG 59.523 38.462 0.00 0.00 35.39 3.79
3085 3148 7.262048 TGATACAGATGTTTATGTGCTTCGTA 58.738 34.615 0.00 0.00 31.07 3.43
3090 3153 8.765219 ACAGATGTTTATGTGCTTCGTATATTC 58.235 33.333 0.00 0.00 31.07 1.75
3091 3154 8.764287 CAGATGTTTATGTGCTTCGTATATTCA 58.236 33.333 0.00 0.00 0.00 2.57
3098 3162 9.715123 TTATGTGCTTCGTATATTCAAACATTG 57.285 29.630 0.00 0.00 0.00 2.82
3126 3190 6.457159 TCCAAGTGGGGACTAGAATTAAAA 57.543 37.500 0.00 0.00 37.22 1.52
3131 3195 7.997773 AGTGGGGACTAGAATTAAAAGTTTC 57.002 36.000 0.00 0.00 0.00 2.78
3167 3231 5.015178 ACCTTTGGACCAGATTCCTTTGATA 59.985 40.000 0.00 0.00 36.51 2.15
3171 3235 6.823286 TGGACCAGATTCCTTTGATATACA 57.177 37.500 0.00 0.00 36.51 2.29
3173 3237 8.504811 TGGACCAGATTCCTTTGATATACATA 57.495 34.615 0.00 0.00 36.51 2.29
3174 3238 8.375506 TGGACCAGATTCCTTTGATATACATAC 58.624 37.037 0.00 0.00 36.51 2.39
3175 3239 8.375506 GGACCAGATTCCTTTGATATACATACA 58.624 37.037 0.00 0.00 32.24 2.29
3176 3240 9.950496 GACCAGATTCCTTTGATATACATACAT 57.050 33.333 0.00 0.00 0.00 2.29
3206 3295 6.975772 GTGTATCCTGTGTCTACTTTCTGATC 59.024 42.308 0.00 0.00 0.00 2.92
3229 3351 1.440145 GCAGCTAATCAACCCGGCTC 61.440 60.000 0.00 0.00 0.00 4.70
3239 3361 1.066143 CAACCCGGCTCTTGTACTGAT 60.066 52.381 0.00 0.00 0.00 2.90
3244 3366 3.448686 CCGGCTCTTGTACTGATGTTAG 58.551 50.000 0.00 0.00 0.00 2.34
3247 3369 4.929808 CGGCTCTTGTACTGATGTTAGTTT 59.070 41.667 0.00 0.00 32.19 2.66
3289 3411 9.790344 ATAAGAGCTGCATTCATAAATTCTACT 57.210 29.630 1.02 0.00 0.00 2.57
3316 3438 8.700973 ACTCCTTACATTGTTAATTTTGTGGTT 58.299 29.630 0.00 0.00 0.00 3.67
3335 3457 5.357878 GTGGTTCTGAAAATCCATCTATGCA 59.642 40.000 2.07 0.00 32.45 3.96
3351 3473 9.555727 CCATCTATGCACATGATATGATGAATA 57.444 33.333 9.30 3.70 33.92 1.75
3465 3592 3.801997 CTCCCCGGCTCCATTGCT 61.802 66.667 0.00 0.00 0.00 3.91
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 2.511659 GAGGGGTTACTTTGGTGGAAC 58.488 52.381 0.00 0.00 0.00 3.62
8 9 1.426215 GGAGGGGTTACTTTGGTGGAA 59.574 52.381 0.00 0.00 0.00 3.53
9 10 1.069775 GGAGGGGTTACTTTGGTGGA 58.930 55.000 0.00 0.00 0.00 4.02
10 11 0.774908 TGGAGGGGTTACTTTGGTGG 59.225 55.000 0.00 0.00 0.00 4.61
11 12 2.620627 GGATGGAGGGGTTACTTTGGTG 60.621 54.545 0.00 0.00 0.00 4.17
12 13 1.639108 GGATGGAGGGGTTACTTTGGT 59.361 52.381 0.00 0.00 0.00 3.67
13 14 1.408266 CGGATGGAGGGGTTACTTTGG 60.408 57.143 0.00 0.00 0.00 3.28
14 15 1.408266 CCGGATGGAGGGGTTACTTTG 60.408 57.143 0.00 0.00 37.49 2.77
15 16 0.916809 CCGGATGGAGGGGTTACTTT 59.083 55.000 0.00 0.00 37.49 2.66
16 17 0.253020 ACCGGATGGAGGGGTTACTT 60.253 55.000 9.46 0.00 39.21 2.24
17 18 0.981277 CACCGGATGGAGGGGTTACT 60.981 60.000 9.46 0.00 39.21 2.24
18 19 0.979187 TCACCGGATGGAGGGGTTAC 60.979 60.000 9.46 0.00 39.21 2.50
19 20 0.252789 TTCACCGGATGGAGGGGTTA 60.253 55.000 9.46 0.00 39.21 2.85
20 21 1.137594 TTTCACCGGATGGAGGGGTT 61.138 55.000 9.46 0.00 39.21 4.11
21 22 1.137594 TTTTCACCGGATGGAGGGGT 61.138 55.000 9.46 0.00 39.21 4.95
22 23 0.394352 CTTTTCACCGGATGGAGGGG 60.394 60.000 9.46 0.00 39.21 4.79
23 24 0.328258 ACTTTTCACCGGATGGAGGG 59.672 55.000 9.46 0.00 39.21 4.30
24 25 1.271379 ACACTTTTCACCGGATGGAGG 60.271 52.381 9.46 0.00 39.21 4.30
25 26 2.185004 ACACTTTTCACCGGATGGAG 57.815 50.000 9.46 1.42 39.21 3.86
26 27 2.027561 CCTACACTTTTCACCGGATGGA 60.028 50.000 9.46 0.00 39.21 3.41
27 28 2.290071 ACCTACACTTTTCACCGGATGG 60.290 50.000 9.46 0.00 42.84 3.51
28 29 3.053831 ACCTACACTTTTCACCGGATG 57.946 47.619 9.46 2.48 0.00 3.51
29 30 3.782656 AACCTACACTTTTCACCGGAT 57.217 42.857 9.46 0.00 0.00 4.18
30 31 3.207778 CAAACCTACACTTTTCACCGGA 58.792 45.455 9.46 0.00 0.00 5.14
31 32 2.292292 CCAAACCTACACTTTTCACCGG 59.708 50.000 0.00 0.00 0.00 5.28
32 33 2.287368 GCCAAACCTACACTTTTCACCG 60.287 50.000 0.00 0.00 0.00 4.94
33 34 2.956333 AGCCAAACCTACACTTTTCACC 59.044 45.455 0.00 0.00 0.00 4.02
34 35 4.649088 AAGCCAAACCTACACTTTTCAC 57.351 40.909 0.00 0.00 0.00 3.18
35 36 6.777213 TTAAAGCCAAACCTACACTTTTCA 57.223 33.333 0.00 0.00 33.01 2.69
36 37 8.657074 ATTTTAAAGCCAAACCTACACTTTTC 57.343 30.769 0.00 0.00 33.01 2.29
37 38 9.456147 AAATTTTAAAGCCAAACCTACACTTTT 57.544 25.926 0.00 0.00 33.01 2.27
38 39 8.888716 CAAATTTTAAAGCCAAACCTACACTTT 58.111 29.630 0.00 0.00 35.00 2.66
39 40 7.011950 GCAAATTTTAAAGCCAAACCTACACTT 59.988 33.333 0.00 0.00 0.00 3.16
40 41 6.481976 GCAAATTTTAAAGCCAAACCTACACT 59.518 34.615 0.00 0.00 0.00 3.55
41 42 6.293190 GGCAAATTTTAAAGCCAAACCTACAC 60.293 38.462 11.36 0.00 46.26 2.90
42 43 5.760743 GGCAAATTTTAAAGCCAAACCTACA 59.239 36.000 11.36 0.00 46.26 2.74
43 44 6.236017 GGCAAATTTTAAAGCCAAACCTAC 57.764 37.500 11.36 0.00 46.26 3.18
51 52 5.298026 TCTTTTGTGGGCAAATTTTAAAGCC 59.702 36.000 8.41 8.41 43.26 4.35
52 53 6.038161 ACTCTTTTGTGGGCAAATTTTAAAGC 59.962 34.615 0.00 0.00 43.26 3.51
53 54 7.065683 ACACTCTTTTGTGGGCAAATTTTAAAG 59.934 33.333 0.00 0.00 43.26 1.85
54 55 6.881602 ACACTCTTTTGTGGGCAAATTTTAAA 59.118 30.769 0.00 0.00 43.26 1.52
55 56 6.410540 ACACTCTTTTGTGGGCAAATTTTAA 58.589 32.000 0.00 0.00 43.26 1.52
56 57 5.983540 ACACTCTTTTGTGGGCAAATTTTA 58.016 33.333 0.00 0.00 43.26 1.52
57 58 4.842574 ACACTCTTTTGTGGGCAAATTTT 58.157 34.783 0.00 0.00 43.26 1.82
58 59 4.486125 ACACTCTTTTGTGGGCAAATTT 57.514 36.364 0.00 0.00 43.26 1.82
59 60 4.649218 AGTACACTCTTTTGTGGGCAAATT 59.351 37.500 0.00 0.00 43.26 1.82
60 61 4.215109 AGTACACTCTTTTGTGGGCAAAT 58.785 39.130 0.00 0.00 43.26 2.32
61 62 3.626930 AGTACACTCTTTTGTGGGCAAA 58.373 40.909 0.00 0.00 42.25 3.68
62 63 3.290948 AGTACACTCTTTTGTGGGCAA 57.709 42.857 0.00 0.00 41.84 4.52
63 64 3.211045 GAAGTACACTCTTTTGTGGGCA 58.789 45.455 0.00 0.00 41.84 5.36
64 65 2.552743 GGAAGTACACTCTTTTGTGGGC 59.447 50.000 0.00 0.00 41.84 5.36
65 66 3.815809 TGGAAGTACACTCTTTTGTGGG 58.184 45.455 0.00 0.00 41.84 4.61
66 67 5.308825 AGATGGAAGTACACTCTTTTGTGG 58.691 41.667 0.00 0.00 41.84 4.17
67 68 6.708054 AGAAGATGGAAGTACACTCTTTTGTG 59.292 38.462 0.00 0.00 43.07 3.33
68 69 6.831976 AGAAGATGGAAGTACACTCTTTTGT 58.168 36.000 0.00 0.00 0.00 2.83
69 70 6.931281 TGAGAAGATGGAAGTACACTCTTTTG 59.069 38.462 0.00 0.00 0.00 2.44
70 71 7.067496 TGAGAAGATGGAAGTACACTCTTTT 57.933 36.000 0.00 0.00 0.00 2.27
71 72 6.672266 TGAGAAGATGGAAGTACACTCTTT 57.328 37.500 0.00 0.00 0.00 2.52
72 73 6.672266 TTGAGAAGATGGAAGTACACTCTT 57.328 37.500 0.00 0.00 0.00 2.85
73 74 6.638610 CATTGAGAAGATGGAAGTACACTCT 58.361 40.000 0.00 0.00 0.00 3.24
74 75 5.293079 GCATTGAGAAGATGGAAGTACACTC 59.707 44.000 0.00 0.00 0.00 3.51
75 76 5.181748 GCATTGAGAAGATGGAAGTACACT 58.818 41.667 0.00 0.00 0.00 3.55
76 77 4.937620 TGCATTGAGAAGATGGAAGTACAC 59.062 41.667 0.00 0.00 0.00 2.90
77 78 4.937620 GTGCATTGAGAAGATGGAAGTACA 59.062 41.667 0.00 0.00 0.00 2.90
78 79 5.181748 AGTGCATTGAGAAGATGGAAGTAC 58.818 41.667 0.00 0.00 0.00 2.73
79 80 5.426689 AGTGCATTGAGAAGATGGAAGTA 57.573 39.130 0.00 0.00 0.00 2.24
80 81 4.298103 AGTGCATTGAGAAGATGGAAGT 57.702 40.909 0.00 0.00 0.00 3.01
81 82 5.640189 AAAGTGCATTGAGAAGATGGAAG 57.360 39.130 0.00 0.00 0.00 3.46
82 83 7.231317 ACTTTAAAGTGCATTGAGAAGATGGAA 59.769 33.333 19.94 0.00 37.98 3.53
83 84 6.716628 ACTTTAAAGTGCATTGAGAAGATGGA 59.283 34.615 19.94 0.00 37.98 3.41
84 85 6.917533 ACTTTAAAGTGCATTGAGAAGATGG 58.082 36.000 19.94 0.00 37.98 3.51
85 86 8.180267 CCTACTTTAAAGTGCATTGAGAAGATG 58.820 37.037 27.40 2.68 40.07 2.90
86 87 8.103305 TCCTACTTTAAAGTGCATTGAGAAGAT 58.897 33.333 27.40 1.31 40.07 2.40
87 88 7.450074 TCCTACTTTAAAGTGCATTGAGAAGA 58.550 34.615 27.40 9.03 40.07 2.87
88 89 7.672983 TCCTACTTTAAAGTGCATTGAGAAG 57.327 36.000 27.40 14.55 40.07 2.85
89 90 8.458573 TTTCCTACTTTAAAGTGCATTGAGAA 57.541 30.769 27.40 16.13 40.07 2.87
90 91 8.458573 TTTTCCTACTTTAAAGTGCATTGAGA 57.541 30.769 27.40 12.06 40.07 3.27
115 116 5.561532 CGTGTGATGAGAGACAAGCATTTTT 60.562 40.000 0.00 0.00 0.00 1.94
116 117 4.083643 CGTGTGATGAGAGACAAGCATTTT 60.084 41.667 0.00 0.00 0.00 1.82
117 118 3.434641 CGTGTGATGAGAGACAAGCATTT 59.565 43.478 0.00 0.00 0.00 2.32
118 119 2.998670 CGTGTGATGAGAGACAAGCATT 59.001 45.455 0.00 0.00 0.00 3.56
119 120 2.614779 CGTGTGATGAGAGACAAGCAT 58.385 47.619 0.00 0.00 0.00 3.79
120 121 1.337167 CCGTGTGATGAGAGACAAGCA 60.337 52.381 0.00 0.00 0.00 3.91
121 122 1.337260 ACCGTGTGATGAGAGACAAGC 60.337 52.381 0.00 0.00 0.00 4.01
122 123 2.732412 ACCGTGTGATGAGAGACAAG 57.268 50.000 0.00 0.00 0.00 3.16
123 124 4.219725 TGATTACCGTGTGATGAGAGACAA 59.780 41.667 0.00 0.00 0.00 3.18
124 125 3.761752 TGATTACCGTGTGATGAGAGACA 59.238 43.478 0.00 0.00 0.00 3.41
125 126 4.371855 TGATTACCGTGTGATGAGAGAC 57.628 45.455 0.00 0.00 0.00 3.36
126 127 4.142160 CCTTGATTACCGTGTGATGAGAGA 60.142 45.833 0.00 0.00 0.00 3.10
127 128 4.115516 CCTTGATTACCGTGTGATGAGAG 58.884 47.826 0.00 0.00 0.00 3.20
128 129 3.678806 GCCTTGATTACCGTGTGATGAGA 60.679 47.826 0.00 0.00 0.00 3.27
129 130 2.609459 GCCTTGATTACCGTGTGATGAG 59.391 50.000 0.00 0.00 0.00 2.90
130 131 2.236146 AGCCTTGATTACCGTGTGATGA 59.764 45.455 0.00 0.00 0.00 2.92
131 132 2.632377 AGCCTTGATTACCGTGTGATG 58.368 47.619 0.00 0.00 0.00 3.07
132 133 4.189231 GTTAGCCTTGATTACCGTGTGAT 58.811 43.478 0.00 0.00 0.00 3.06
133 134 3.007074 TGTTAGCCTTGATTACCGTGTGA 59.993 43.478 0.00 0.00 0.00 3.58
134 135 3.331150 TGTTAGCCTTGATTACCGTGTG 58.669 45.455 0.00 0.00 0.00 3.82
135 136 3.596214 CTGTTAGCCTTGATTACCGTGT 58.404 45.455 0.00 0.00 0.00 4.49
136 137 2.351726 GCTGTTAGCCTTGATTACCGTG 59.648 50.000 0.00 0.00 34.48 4.94
137 138 2.027561 TGCTGTTAGCCTTGATTACCGT 60.028 45.455 0.00 0.00 41.51 4.83
138 139 2.609459 CTGCTGTTAGCCTTGATTACCG 59.391 50.000 0.00 0.00 41.51 4.02
139 140 3.610911 ACTGCTGTTAGCCTTGATTACC 58.389 45.455 0.00 0.00 41.51 2.85
140 141 4.508662 AGACTGCTGTTAGCCTTGATTAC 58.491 43.478 0.00 0.00 41.51 1.89
141 142 4.826274 AGACTGCTGTTAGCCTTGATTA 57.174 40.909 0.00 0.00 41.51 1.75
142 143 3.710209 AGACTGCTGTTAGCCTTGATT 57.290 42.857 0.00 0.00 41.51 2.57
143 144 3.429547 CGTAGACTGCTGTTAGCCTTGAT 60.430 47.826 0.00 0.00 41.51 2.57
144 145 2.094700 CGTAGACTGCTGTTAGCCTTGA 60.095 50.000 0.00 0.00 41.51 3.02
145 146 2.263077 CGTAGACTGCTGTTAGCCTTG 58.737 52.381 0.00 0.00 41.51 3.61
146 147 1.404315 GCGTAGACTGCTGTTAGCCTT 60.404 52.381 0.00 0.00 41.51 4.35
147 148 0.173708 GCGTAGACTGCTGTTAGCCT 59.826 55.000 0.00 0.00 41.51 4.58
148 149 0.108804 TGCGTAGACTGCTGTTAGCC 60.109 55.000 0.00 0.00 41.51 3.93
149 150 1.590238 CATGCGTAGACTGCTGTTAGC 59.410 52.381 0.00 2.63 42.82 3.09
150 151 2.196749 CCATGCGTAGACTGCTGTTAG 58.803 52.381 0.00 0.00 0.00 2.34
151 152 1.548719 ACCATGCGTAGACTGCTGTTA 59.451 47.619 0.00 0.00 0.00 2.41
152 153 0.321671 ACCATGCGTAGACTGCTGTT 59.678 50.000 0.00 0.00 0.00 3.16
153 154 0.108615 GACCATGCGTAGACTGCTGT 60.109 55.000 0.00 0.00 0.00 4.40
154 155 0.174389 AGACCATGCGTAGACTGCTG 59.826 55.000 0.00 0.00 0.00 4.41
155 156 0.457851 GAGACCATGCGTAGACTGCT 59.542 55.000 0.00 0.00 0.00 4.24
156 157 0.528684 GGAGACCATGCGTAGACTGC 60.529 60.000 0.00 0.00 0.00 4.40
157 158 1.107114 AGGAGACCATGCGTAGACTG 58.893 55.000 0.00 0.00 0.00 3.51
158 159 1.853963 AAGGAGACCATGCGTAGACT 58.146 50.000 0.00 0.00 0.00 3.24
159 160 2.688958 ACTAAGGAGACCATGCGTAGAC 59.311 50.000 0.00 0.00 35.40 2.59
160 161 3.014304 ACTAAGGAGACCATGCGTAGA 57.986 47.619 0.00 0.00 35.40 2.59
161 162 3.802948 AACTAAGGAGACCATGCGTAG 57.197 47.619 0.00 0.00 37.35 3.51
162 163 3.767673 AGAAACTAAGGAGACCATGCGTA 59.232 43.478 0.00 0.00 0.00 4.42
163 164 2.567615 AGAAACTAAGGAGACCATGCGT 59.432 45.455 0.00 0.00 0.00 5.24
164 165 2.932614 CAGAAACTAAGGAGACCATGCG 59.067 50.000 0.00 0.00 0.00 4.73
165 166 2.680339 GCAGAAACTAAGGAGACCATGC 59.320 50.000 0.00 0.00 0.00 4.06
166 167 3.942829 TGCAGAAACTAAGGAGACCATG 58.057 45.455 0.00 0.00 0.00 3.66
167 168 4.521146 CATGCAGAAACTAAGGAGACCAT 58.479 43.478 0.00 0.00 0.00 3.55
168 169 3.869912 GCATGCAGAAACTAAGGAGACCA 60.870 47.826 14.21 0.00 0.00 4.02
169 170 2.680339 GCATGCAGAAACTAAGGAGACC 59.320 50.000 14.21 0.00 0.00 3.85
170 171 3.126000 GTGCATGCAGAAACTAAGGAGAC 59.874 47.826 23.41 0.00 0.00 3.36
171 172 3.008375 AGTGCATGCAGAAACTAAGGAGA 59.992 43.478 23.41 0.00 0.00 3.71
172 173 3.341823 AGTGCATGCAGAAACTAAGGAG 58.658 45.455 23.41 0.00 0.00 3.69
173 174 3.423539 AGTGCATGCAGAAACTAAGGA 57.576 42.857 23.41 0.00 0.00 3.36
174 175 4.437930 GCTAAGTGCATGCAGAAACTAAGG 60.438 45.833 23.41 9.07 42.31 2.69
175 176 4.394300 AGCTAAGTGCATGCAGAAACTAAG 59.606 41.667 23.41 12.44 45.94 2.18
176 177 4.326826 AGCTAAGTGCATGCAGAAACTAA 58.673 39.130 23.41 1.64 45.94 2.24
177 178 3.935203 GAGCTAAGTGCATGCAGAAACTA 59.065 43.478 23.41 7.24 45.94 2.24
178 179 2.746362 GAGCTAAGTGCATGCAGAAACT 59.254 45.455 23.41 14.95 45.94 2.66
179 180 2.485426 TGAGCTAAGTGCATGCAGAAAC 59.515 45.455 23.41 9.52 45.94 2.78
180 181 2.781923 TGAGCTAAGTGCATGCAGAAA 58.218 42.857 23.41 8.15 45.94 2.52
181 182 2.477845 TGAGCTAAGTGCATGCAGAA 57.522 45.000 23.41 8.55 45.94 3.02
182 183 2.681344 CAATGAGCTAAGTGCATGCAGA 59.319 45.455 23.41 8.73 45.94 4.26
183 184 2.223502 CCAATGAGCTAAGTGCATGCAG 60.224 50.000 23.41 10.75 45.94 4.41
184 185 1.746787 CCAATGAGCTAAGTGCATGCA 59.253 47.619 18.46 18.46 45.94 3.96
185 186 1.066605 CCCAATGAGCTAAGTGCATGC 59.933 52.381 11.82 11.82 45.94 4.06
186 187 1.679680 CCCCAATGAGCTAAGTGCATG 59.320 52.381 0.00 0.00 45.94 4.06
187 188 1.410648 CCCCCAATGAGCTAAGTGCAT 60.411 52.381 0.00 0.00 45.94 3.96
188 189 0.034186 CCCCCAATGAGCTAAGTGCA 60.034 55.000 0.00 0.00 45.94 4.57
189 190 0.034089 ACCCCCAATGAGCTAAGTGC 60.034 55.000 0.00 0.00 43.29 4.40
190 191 2.094675 CAACCCCCAATGAGCTAAGTG 58.905 52.381 0.00 0.00 0.00 3.16
191 192 1.005924 CCAACCCCCAATGAGCTAAGT 59.994 52.381 0.00 0.00 0.00 2.24
192 193 1.686115 CCCAACCCCCAATGAGCTAAG 60.686 57.143 0.00 0.00 0.00 2.18
193 194 0.334676 CCCAACCCCCAATGAGCTAA 59.665 55.000 0.00 0.00 0.00 3.09
194 195 0.849094 ACCCAACCCCCAATGAGCTA 60.849 55.000 0.00 0.00 0.00 3.32
195 196 0.849094 TACCCAACCCCCAATGAGCT 60.849 55.000 0.00 0.00 0.00 4.09
196 197 0.683179 GTACCCAACCCCCAATGAGC 60.683 60.000 0.00 0.00 0.00 4.26
197 198 0.999712 AGTACCCAACCCCCAATGAG 59.000 55.000 0.00 0.00 0.00 2.90
198 199 1.462426 AAGTACCCAACCCCCAATGA 58.538 50.000 0.00 0.00 0.00 2.57
199 200 3.459710 TTAAGTACCCAACCCCCAATG 57.540 47.619 0.00 0.00 0.00 2.82
200 201 3.663632 TCTTTAAGTACCCAACCCCCAAT 59.336 43.478 0.00 0.00 0.00 3.16
201 202 3.062129 TCTTTAAGTACCCAACCCCCAA 58.938 45.455 0.00 0.00 0.00 4.12
202 203 2.645797 CTCTTTAAGTACCCAACCCCCA 59.354 50.000 0.00 0.00 0.00 4.96
203 204 2.025605 CCTCTTTAAGTACCCAACCCCC 60.026 54.545 0.00 0.00 0.00 5.40
204 205 2.914941 TCCTCTTTAAGTACCCAACCCC 59.085 50.000 0.00 0.00 0.00 4.95
205 206 3.842436 TCTCCTCTTTAAGTACCCAACCC 59.158 47.826 0.00 0.00 0.00 4.11
206 207 4.776308 TCTCTCCTCTTTAAGTACCCAACC 59.224 45.833 0.00 0.00 0.00 3.77
207 208 5.715753 TCTCTCTCCTCTTTAAGTACCCAAC 59.284 44.000 0.00 0.00 0.00 3.77
208 209 5.900437 TCTCTCTCCTCTTTAAGTACCCAA 58.100 41.667 0.00 0.00 0.00 4.12
209 210 5.531753 TCTCTCTCCTCTTTAAGTACCCA 57.468 43.478 0.00 0.00 0.00 4.51
210 211 5.303333 CCATCTCTCTCCTCTTTAAGTACCC 59.697 48.000 0.00 0.00 0.00 3.69
211 212 5.894964 ACCATCTCTCTCCTCTTTAAGTACC 59.105 44.000 0.00 0.00 0.00 3.34
212 213 6.603997 TCACCATCTCTCTCCTCTTTAAGTAC 59.396 42.308 0.00 0.00 0.00 2.73
213 214 6.603997 GTCACCATCTCTCTCCTCTTTAAGTA 59.396 42.308 0.00 0.00 0.00 2.24
214 215 5.420739 GTCACCATCTCTCTCCTCTTTAAGT 59.579 44.000 0.00 0.00 0.00 2.24
215 216 5.656416 AGTCACCATCTCTCTCCTCTTTAAG 59.344 44.000 0.00 0.00 0.00 1.85
216 217 5.584913 AGTCACCATCTCTCTCCTCTTTAA 58.415 41.667 0.00 0.00 0.00 1.52
217 218 5.199982 AGTCACCATCTCTCTCCTCTTTA 57.800 43.478 0.00 0.00 0.00 1.85
218 219 4.059773 AGTCACCATCTCTCTCCTCTTT 57.940 45.455 0.00 0.00 0.00 2.52
219 220 3.756082 AGTCACCATCTCTCTCCTCTT 57.244 47.619 0.00 0.00 0.00 2.85
220 221 3.364549 CAAGTCACCATCTCTCTCCTCT 58.635 50.000 0.00 0.00 0.00 3.69
221 222 2.159114 GCAAGTCACCATCTCTCTCCTC 60.159 54.545 0.00 0.00 0.00 3.71
222 223 1.830477 GCAAGTCACCATCTCTCTCCT 59.170 52.381 0.00 0.00 0.00 3.69
223 224 1.552337 TGCAAGTCACCATCTCTCTCC 59.448 52.381 0.00 0.00 0.00 3.71
224 225 2.615869 GTGCAAGTCACCATCTCTCTC 58.384 52.381 0.00 0.00 39.79 3.20
225 226 2.758736 GTGCAAGTCACCATCTCTCT 57.241 50.000 0.00 0.00 39.79 3.10
234 235 2.863704 GCATTGGAAAGGTGCAAGTCAC 60.864 50.000 0.00 0.00 44.90 3.67
235 236 1.340889 GCATTGGAAAGGTGCAAGTCA 59.659 47.619 0.00 0.00 38.60 3.41
236 237 1.340889 TGCATTGGAAAGGTGCAAGTC 59.659 47.619 0.00 0.00 44.99 3.01
237 238 1.412079 TGCATTGGAAAGGTGCAAGT 58.588 45.000 0.00 0.00 44.99 3.16
273 274 9.691362 ACGCACAGAAATTTTAAGACAAATTAT 57.309 25.926 0.00 0.00 35.67 1.28
275 276 8.964150 GTACGCACAGAAATTTTAAGACAAATT 58.036 29.630 0.00 0.00 37.86 1.82
276 277 8.132362 TGTACGCACAGAAATTTTAAGACAAAT 58.868 29.630 0.00 0.00 0.00 2.32
277 278 7.429920 GTGTACGCACAGAAATTTTAAGACAAA 59.570 33.333 0.39 0.00 44.64 2.83
278 279 6.908284 GTGTACGCACAGAAATTTTAAGACAA 59.092 34.615 0.39 0.00 44.64 3.18
279 280 6.423862 GTGTACGCACAGAAATTTTAAGACA 58.576 36.000 0.39 0.00 44.64 3.41
280 281 6.890360 GTGTACGCACAGAAATTTTAAGAC 57.110 37.500 0.39 0.00 44.64 3.01
294 295 0.932399 ACGGTCAAAAGTGTACGCAC 59.068 50.000 9.48 0.00 45.57 5.34
295 296 2.126467 GTACGGTCAAAAGTGTACGCA 58.874 47.619 9.48 0.00 0.00 5.24
296 297 2.842939 GTACGGTCAAAAGTGTACGC 57.157 50.000 0.00 0.00 0.00 4.42
298 299 2.982470 CTCCGTACGGTCAAAAGTGTAC 59.018 50.000 32.16 0.00 36.47 2.90
299 300 2.030007 CCTCCGTACGGTCAAAAGTGTA 60.030 50.000 32.16 9.41 36.47 2.90
300 301 1.269936 CCTCCGTACGGTCAAAAGTGT 60.270 52.381 32.16 0.00 36.47 3.55
301 302 1.425412 CCTCCGTACGGTCAAAAGTG 58.575 55.000 32.16 12.71 36.47 3.16
302 303 0.319405 CCCTCCGTACGGTCAAAAGT 59.681 55.000 32.16 0.00 36.47 2.66
303 304 0.390735 CCCCTCCGTACGGTCAAAAG 60.391 60.000 32.16 21.48 36.47 2.27
304 305 1.672898 CCCCTCCGTACGGTCAAAA 59.327 57.895 32.16 13.18 36.47 2.44
305 306 2.285024 CCCCCTCCGTACGGTCAAA 61.285 63.158 32.16 13.58 36.47 2.69
306 307 2.148723 TACCCCCTCCGTACGGTCAA 62.149 60.000 32.16 13.96 36.47 3.18
307 308 1.936767 ATACCCCCTCCGTACGGTCA 61.937 60.000 32.16 14.72 36.47 4.02
308 309 1.152673 ATACCCCCTCCGTACGGTC 60.153 63.158 32.16 0.00 36.47 4.79
309 310 1.456331 CATACCCCCTCCGTACGGT 60.456 63.158 32.16 15.64 36.47 4.83
310 311 2.205152 CCATACCCCCTCCGTACGG 61.205 68.421 28.66 28.66 0.00 4.02
311 312 1.152694 TCCATACCCCCTCCGTACG 60.153 63.158 8.69 8.69 0.00 3.67
312 313 1.458639 CGTCCATACCCCCTCCGTAC 61.459 65.000 0.00 0.00 0.00 3.67
313 314 1.152694 CGTCCATACCCCCTCCGTA 60.153 63.158 0.00 0.00 0.00 4.02
314 315 1.936767 TACGTCCATACCCCCTCCGT 61.937 60.000 0.00 0.00 0.00 4.69
315 316 0.541296 ATACGTCCATACCCCCTCCG 60.541 60.000 0.00 0.00 0.00 4.63
316 317 0.974383 CATACGTCCATACCCCCTCC 59.026 60.000 0.00 0.00 0.00 4.30
317 318 0.974383 CCATACGTCCATACCCCCTC 59.026 60.000 0.00 0.00 0.00 4.30
318 319 0.266753 ACCATACGTCCATACCCCCT 59.733 55.000 0.00 0.00 0.00 4.79
319 320 0.683412 GACCATACGTCCATACCCCC 59.317 60.000 0.00 0.00 35.23 5.40
320 321 1.713297 AGACCATACGTCCATACCCC 58.287 55.000 0.00 0.00 43.08 4.95
321 322 2.288030 CGAAGACCATACGTCCATACCC 60.288 54.545 0.00 0.00 43.08 3.69
322 323 2.861360 GCGAAGACCATACGTCCATACC 60.861 54.545 0.00 0.00 43.08 2.73
323 324 2.223641 TGCGAAGACCATACGTCCATAC 60.224 50.000 0.00 0.00 43.08 2.39
324 325 2.025898 TGCGAAGACCATACGTCCATA 58.974 47.619 0.00 0.00 43.08 2.74
325 326 0.821517 TGCGAAGACCATACGTCCAT 59.178 50.000 0.00 0.00 43.08 3.41
326 327 0.172578 CTGCGAAGACCATACGTCCA 59.827 55.000 0.00 0.00 43.08 4.02
327 328 0.454600 TCTGCGAAGACCATACGTCC 59.545 55.000 0.00 0.00 43.08 4.79
328 329 2.159421 TCTTCTGCGAAGACCATACGTC 60.159 50.000 14.32 0.00 42.32 4.34
329 330 1.816835 TCTTCTGCGAAGACCATACGT 59.183 47.619 14.32 0.00 0.00 3.57
330 331 2.561733 TCTTCTGCGAAGACCATACG 57.438 50.000 14.32 0.00 0.00 3.06
331 332 5.607119 TTTTTCTTCTGCGAAGACCATAC 57.393 39.130 16.90 0.00 0.00 2.39
332 333 4.154195 GCTTTTTCTTCTGCGAAGACCATA 59.846 41.667 16.90 4.20 0.00 2.74
333 334 3.057946 GCTTTTTCTTCTGCGAAGACCAT 60.058 43.478 16.90 0.00 0.00 3.55
334 335 2.290641 GCTTTTTCTTCTGCGAAGACCA 59.709 45.455 16.90 7.52 0.00 4.02
335 336 2.290641 TGCTTTTTCTTCTGCGAAGACC 59.709 45.455 16.90 7.39 0.00 3.85
336 337 3.609103 TGCTTTTTCTTCTGCGAAGAC 57.391 42.857 16.90 8.75 0.00 3.01
337 338 4.836125 AATGCTTTTTCTTCTGCGAAGA 57.164 36.364 14.32 14.32 0.00 2.87
338 339 6.991485 TTTAATGCTTTTTCTTCTGCGAAG 57.009 33.333 10.75 10.75 0.00 3.79
339 340 7.763172 TTTTTAATGCTTTTTCTTCTGCGAA 57.237 28.000 0.00 0.00 0.00 4.70
362 363 4.460263 TGCGGGTATCATAGCAGATTTTT 58.540 39.130 0.00 0.00 34.39 1.94
363 364 4.085357 TGCGGGTATCATAGCAGATTTT 57.915 40.909 0.00 0.00 34.39 1.82
364 365 3.769739 TGCGGGTATCATAGCAGATTT 57.230 42.857 0.00 0.00 34.39 2.17
365 366 3.769739 TTGCGGGTATCATAGCAGATT 57.230 42.857 0.00 0.00 40.90 2.40
366 367 3.769739 TTTGCGGGTATCATAGCAGAT 57.230 42.857 0.00 0.00 40.90 2.90
367 368 3.552132 TTTTGCGGGTATCATAGCAGA 57.448 42.857 0.00 0.00 40.90 4.26
387 388 3.370209 GGGTAGACCGTAGAGGCATTTTT 60.370 47.826 0.00 0.00 46.52 1.94
388 389 2.169978 GGGTAGACCGTAGAGGCATTTT 59.830 50.000 0.00 0.00 46.52 1.82
389 390 1.761198 GGGTAGACCGTAGAGGCATTT 59.239 52.381 0.00 0.00 46.52 2.32
390 391 1.411041 GGGTAGACCGTAGAGGCATT 58.589 55.000 0.00 0.00 46.52 3.56
391 392 3.128681 GGGTAGACCGTAGAGGCAT 57.871 57.895 0.00 0.00 46.52 4.40
392 393 4.672251 GGGTAGACCGTAGAGGCA 57.328 61.111 0.00 0.00 46.52 4.75
401 402 2.103736 GTAGCACGCGGGTAGACC 59.896 66.667 11.45 0.00 0.00 3.85
402 403 1.226603 CTGTAGCACGCGGGTAGAC 60.227 63.158 11.45 6.33 0.00 2.59
403 404 1.676635 ACTGTAGCACGCGGGTAGA 60.677 57.895 11.45 6.84 0.00 2.59
404 405 1.516386 CACTGTAGCACGCGGGTAG 60.516 63.158 11.45 6.37 0.00 3.18
405 406 2.569657 CACTGTAGCACGCGGGTA 59.430 61.111 11.45 6.30 0.00 3.69
406 407 4.373116 CCACTGTAGCACGCGGGT 62.373 66.667 11.45 7.42 0.00 5.28
410 411 4.735132 TCCGCCACTGTAGCACGC 62.735 66.667 0.00 0.00 0.00 5.34
411 412 2.809601 GTCCGCCACTGTAGCACG 60.810 66.667 0.00 0.00 0.00 5.34
412 413 2.434359 GGTCCGCCACTGTAGCAC 60.434 66.667 0.00 0.00 34.09 4.40
413 414 3.702048 GGGTCCGCCACTGTAGCA 61.702 66.667 0.00 0.00 36.17 3.49
414 415 4.468689 GGGGTCCGCCACTGTAGC 62.469 72.222 0.00 0.00 34.61 3.58
415 416 4.143333 CGGGGTCCGCCACTGTAG 62.143 72.222 0.00 0.00 41.17 2.74
438 439 4.154347 GCTCCTCCGGCCTCACTG 62.154 72.222 0.00 0.00 0.00 3.66
439 440 4.704103 TGCTCCTCCGGCCTCACT 62.704 66.667 0.00 0.00 0.00 3.41
440 441 4.459089 GTGCTCCTCCGGCCTCAC 62.459 72.222 0.00 0.00 0.00 3.51
461 462 4.885270 TGCACCAACCACGTGGGG 62.885 66.667 36.47 29.67 45.74 4.96
478 479 2.226962 TCCTACTCGTAAAGCAGGGT 57.773 50.000 0.00 0.00 38.88 4.34
482 483 5.713025 ACGTTAATTCCTACTCGTAAAGCA 58.287 37.500 0.00 0.00 0.00 3.91
483 484 7.740519 TTACGTTAATTCCTACTCGTAAAGC 57.259 36.000 0.00 0.00 39.54 3.51
500 501 2.160022 GCTGCGGGTCAATTTTACGTTA 59.840 45.455 0.00 0.00 0.00 3.18
533 534 2.754658 GGGAGGAAGAGGACGCGA 60.755 66.667 15.93 0.00 0.00 5.87
534 535 3.839432 GGGGAGGAAGAGGACGCG 61.839 72.222 3.53 3.53 0.00 6.01
537 538 1.305887 TTCGGGGGAGGAAGAGGAC 60.306 63.158 0.00 0.00 0.00 3.85
539 540 1.001760 TCTTCGGGGGAGGAAGAGG 59.998 63.158 0.40 0.00 43.57 3.69
548 549 1.378646 GCTTCCCTTTCTTCGGGGG 60.379 63.158 0.00 0.00 42.73 5.40
551 552 0.881796 GGTTGCTTCCCTTTCTTCGG 59.118 55.000 0.00 0.00 0.00 4.30
552 553 1.537202 CTGGTTGCTTCCCTTTCTTCG 59.463 52.381 0.00 0.00 0.00 3.79
563 568 1.035139 CTGTTCTTGCCTGGTTGCTT 58.965 50.000 0.00 0.00 0.00 3.91
564 569 0.825010 CCTGTTCTTGCCTGGTTGCT 60.825 55.000 0.00 0.00 0.00 3.91
565 570 1.662044 CCTGTTCTTGCCTGGTTGC 59.338 57.895 0.00 0.00 0.00 4.17
566 571 1.181098 CCCCTGTTCTTGCCTGGTTG 61.181 60.000 0.00 0.00 0.00 3.77
567 572 1.153756 CCCCTGTTCTTGCCTGGTT 59.846 57.895 0.00 0.00 0.00 3.67
568 573 1.774217 TCCCCTGTTCTTGCCTGGT 60.774 57.895 0.00 0.00 0.00 4.00
569 574 1.001641 CTCCCCTGTTCTTGCCTGG 60.002 63.158 0.00 0.00 0.00 4.45
570 575 1.001641 CCTCCCCTGTTCTTGCCTG 60.002 63.158 0.00 0.00 0.00 4.85
625 639 4.731853 TCGCTGGGGGTGGATGGA 62.732 66.667 0.00 0.00 0.00 3.41
629 643 4.731853 TGGATCGCTGGGGGTGGA 62.732 66.667 0.00 0.00 0.00 4.02
630 644 3.482232 GATGGATCGCTGGGGGTGG 62.482 68.421 0.00 0.00 0.00 4.61
631 645 2.111878 GATGGATCGCTGGGGGTG 59.888 66.667 0.00 0.00 0.00 4.61
632 646 2.040464 AGATGGATCGCTGGGGGT 60.040 61.111 0.00 0.00 0.00 4.95
646 660 3.620785 GATCCCGGCGAGGCAGAT 61.621 66.667 9.30 2.01 39.21 2.90
715 758 1.579429 GTTCTTGGCGCGATTTGGT 59.421 52.632 12.10 0.00 0.00 3.67
723 766 0.097150 GAAATCTCGGTTCTTGGCGC 59.903 55.000 0.00 0.00 0.00 6.53
743 789 3.913573 CGCCGCGGAAATCTCACG 61.914 66.667 33.48 16.81 0.00 4.35
833 879 3.056328 GCACAAGGGGGCGAAGAC 61.056 66.667 0.00 0.00 0.00 3.01
852 899 0.464554 CCTCCAAGAAGGCGGGATTC 60.465 60.000 0.00 0.00 38.70 2.52
853 900 0.914417 TCCTCCAAGAAGGCGGGATT 60.914 55.000 0.00 0.00 42.89 3.01
854 901 1.306997 TCCTCCAAGAAGGCGGGAT 60.307 57.895 0.00 0.00 42.89 3.85
858 905 2.586792 CCCTCCTCCAAGAAGGCG 59.413 66.667 0.00 0.00 36.29 5.52
860 907 1.213926 CAATCCCCTCCTCCAAGAAGG 59.786 57.143 0.00 0.00 37.81 3.46
861 908 1.213926 CCAATCCCCTCCTCCAAGAAG 59.786 57.143 0.00 0.00 0.00 2.85
865 912 2.316586 GCCCAATCCCCTCCTCCAA 61.317 63.158 0.00 0.00 0.00 3.53
874 921 0.823769 GGAGATTTCCGCCCAATCCC 60.824 60.000 0.00 0.00 32.79 3.85
992 1043 1.497309 GGAGTTCACCATGGTCCCCA 61.497 60.000 16.53 0.00 38.19 4.96
1032 1083 3.723235 CTCGATGGCGGTGGAGGTG 62.723 68.421 0.00 0.00 38.28 4.00
1071 1122 3.122850 CCAGATTTGGGATGCGGC 58.877 61.111 0.00 0.00 41.05 6.53
1076 1127 1.152881 GAGGCGCCAGATTTGGGAT 60.153 57.895 31.54 2.38 45.16 3.85
1077 1128 2.272146 GAGGCGCCAGATTTGGGA 59.728 61.111 31.54 0.00 45.16 4.37
1239 1290 4.729856 AACACCGCGCCGTAGACC 62.730 66.667 0.00 0.00 0.00 3.85
1263 1314 2.029666 CCGATGATGGAGGTCGCC 59.970 66.667 0.00 0.00 34.25 5.54
1335 1386 1.357334 GACGAGGATGGAGACGAGC 59.643 63.158 0.00 0.00 0.00 5.03
1512 1563 2.289072 CCCGATGATGATGAGGTACACC 60.289 54.545 0.00 0.00 0.00 4.16
1515 1566 2.028930 GTCCCCGATGATGATGAGGTAC 60.029 54.545 0.00 0.00 0.00 3.34
1626 1677 1.080705 GAGGAACACCACGAGGACG 60.081 63.158 5.68 0.00 45.75 4.79
1662 1713 1.002900 CTCAGCGAGTCGATCTTCTCC 60.003 57.143 18.61 0.00 0.00 3.71
1746 1797 4.753877 TCGACGAGCTTCACCGCG 62.754 66.667 0.00 0.00 34.40 6.46
1929 1980 4.570663 GTGGAGATCCGGCCGACG 62.571 72.222 30.73 11.63 43.80 5.12
2022 2073 0.874175 TGTCGAAGTTGGTGAGCACG 60.874 55.000 0.00 0.00 0.00 5.34
2025 2076 0.868406 CCTTGTCGAAGTTGGTGAGC 59.132 55.000 0.00 0.00 0.00 4.26
2069 2120 2.959516 TCCTCACAATGTAGTTGAGCG 58.040 47.619 0.00 0.00 40.37 5.03
2295 2346 2.516930 CCTAATGCCAGCCCCGTG 60.517 66.667 0.00 0.00 0.00 4.94
2334 2385 1.651240 CCTTGTCCAGCCTCAATGCG 61.651 60.000 0.00 0.00 36.02 4.73
2496 2547 5.368989 ACAAGCCCTACAAATATAGCTCAC 58.631 41.667 0.00 0.00 0.00 3.51
2526 2577 3.447586 TCTGGCAGTGGTAATACAGTCTC 59.552 47.826 15.27 0.00 0.00 3.36
2529 2580 4.844349 ATTCTGGCAGTGGTAATACAGT 57.156 40.909 15.27 0.00 0.00 3.55
2609 2661 8.993424 ACCCTGTAGATGAAGAAAATGTATAGT 58.007 33.333 0.00 0.00 0.00 2.12
2610 2662 9.838339 AACCCTGTAGATGAAGAAAATGTATAG 57.162 33.333 0.00 0.00 0.00 1.31
2651 2710 0.314935 CACCAACAACATGTCAGCCC 59.685 55.000 0.00 0.00 0.00 5.19
2688 2747 8.421249 AATACATCAAAGAATCTGGTCCAAAA 57.579 30.769 0.00 0.00 0.00 2.44
2689 2748 8.421249 AAATACATCAAAGAATCTGGTCCAAA 57.579 30.769 0.00 0.00 0.00 3.28
2690 2749 8.421249 AAAATACATCAAAGAATCTGGTCCAA 57.579 30.769 0.00 0.00 0.00 3.53
2691 2750 8.421249 AAAAATACATCAAAGAATCTGGTCCA 57.579 30.769 0.00 0.00 0.00 4.02
2742 2801 9.338968 AGACCCAGGATACAAATGTATATGTAT 57.661 33.333 6.07 0.00 43.52 2.29
2743 2802 8.736097 AGACCCAGGATACAAATGTATATGTA 57.264 34.615 6.07 0.00 40.99 2.29
2744 2803 7.633018 AGACCCAGGATACAAATGTATATGT 57.367 36.000 6.07 0.79 40.99 2.29
2745 2804 8.816894 AGTAGACCCAGGATACAAATGTATATG 58.183 37.037 6.07 8.20 40.99 1.78
2754 2817 5.338632 TCAGAAAGTAGACCCAGGATACAA 58.661 41.667 0.00 0.00 41.41 2.41
2785 2848 2.928801 AAAACCAGGGTTGATTTGCC 57.071 45.000 4.14 0.00 38.47 4.52
2948 3011 2.328819 ATGACAAGCTCCAGCAGATC 57.671 50.000 0.48 0.00 45.16 2.75
2954 3017 2.746362 GAGTTGGAATGACAAGCTCCAG 59.254 50.000 0.00 0.00 40.29 3.86
2955 3018 2.373169 AGAGTTGGAATGACAAGCTCCA 59.627 45.455 0.00 1.21 37.47 3.86
2956 3019 2.746362 CAGAGTTGGAATGACAAGCTCC 59.254 50.000 0.00 0.00 33.20 4.70
2969 3032 4.521146 ACTGCAAGAATATCCAGAGTTGG 58.479 43.478 0.00 0.00 41.37 3.77
2970 3033 9.499479 AATATACTGCAAGAATATCCAGAGTTG 57.501 33.333 0.00 0.00 37.43 3.16
3056 3119 7.117285 AGCACATAAACATCTGTATCAGAGA 57.883 36.000 5.71 0.00 44.08 3.10
3067 3130 9.929722 TTTGAATATACGAAGCACATAAACATC 57.070 29.630 0.00 0.00 0.00 3.06
3085 3148 9.054922 CCACTTGGAAAAACAATGTTTGAATAT 57.945 29.630 12.50 0.00 37.39 1.28
3090 3153 4.335037 CCCCACTTGGAAAAACAATGTTTG 59.665 41.667 12.50 1.29 37.39 2.93
3091 3154 4.226168 TCCCCACTTGGAAAAACAATGTTT 59.774 37.500 5.41 5.41 37.39 2.83
3097 3161 2.838637 AGTCCCCACTTGGAAAAACA 57.161 45.000 0.00 0.00 35.80 2.83
3098 3162 4.094830 TCTAGTCCCCACTTGGAAAAAC 57.905 45.455 0.00 0.00 35.80 2.43
3131 3195 5.076873 TGGTCCAAAGGTTCTCAAATTAGG 58.923 41.667 0.00 0.00 0.00 2.69
3171 3235 9.982651 GTAGACACAGGATACACATTTATGTAT 57.017 33.333 0.00 0.00 46.25 2.29
3173 3237 8.079211 AGTAGACACAGGATACACATTTATGT 57.921 34.615 0.00 0.00 42.84 2.29
3174 3238 8.948631 AAGTAGACACAGGATACACATTTATG 57.051 34.615 0.00 0.00 41.41 1.90
3175 3239 9.601217 GAAAGTAGACACAGGATACACATTTAT 57.399 33.333 0.00 0.00 41.41 1.40
3176 3240 8.812972 AGAAAGTAGACACAGGATACACATTTA 58.187 33.333 0.00 0.00 41.41 1.40
3177 3241 7.604164 CAGAAAGTAGACACAGGATACACATTT 59.396 37.037 0.00 0.00 41.41 2.32
3178 3242 7.039011 TCAGAAAGTAGACACAGGATACACATT 60.039 37.037 0.00 0.00 41.41 2.71
3183 3272 6.038382 TCGATCAGAAAGTAGACACAGGATAC 59.962 42.308 0.00 0.00 0.00 2.24
3188 3277 4.667262 CCTCGATCAGAAAGTAGACACAG 58.333 47.826 0.00 0.00 0.00 3.66
3206 3295 1.154205 CGGGTTGATTAGCTGCCTCG 61.154 60.000 0.00 0.00 0.00 4.63
3229 3351 6.428159 AGGCAGAAAACTAACATCAGTACAAG 59.572 38.462 0.00 0.00 0.00 3.16
3244 3366 8.663911 GCTCTTATCATATCATAGGCAGAAAAC 58.336 37.037 0.00 0.00 0.00 2.43
3247 3369 7.554211 CAGCTCTTATCATATCATAGGCAGAA 58.446 38.462 0.00 0.00 0.00 3.02
3288 3410 9.840427 CCACAAAATTAACAATGTAAGGAGTAG 57.160 33.333 0.00 0.00 0.00 2.57
3289 3411 9.357161 ACCACAAAATTAACAATGTAAGGAGTA 57.643 29.630 0.00 0.00 0.00 2.59
3290 3412 8.245195 ACCACAAAATTAACAATGTAAGGAGT 57.755 30.769 0.00 0.00 0.00 3.85
3316 3438 6.358991 TCATGTGCATAGATGGATTTTCAGA 58.641 36.000 0.00 0.00 0.00 3.27
3335 3457 9.384764 CTGAGCTCAATATTCATCATATCATGT 57.615 33.333 18.85 0.00 0.00 3.21
3351 3473 4.783055 AGATTGCATTCTCTGAGCTCAAT 58.217 39.130 18.85 5.25 0.00 2.57
3429 3556 5.048846 GGAGCCATCCCTGTTATTCTAAA 57.951 43.478 0.00 0.00 40.03 1.85
3430 3557 4.706842 GGAGCCATCCCTGTTATTCTAA 57.293 45.455 0.00 0.00 40.03 2.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.