Multiple sequence alignment - TraesCS7B01G432700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G432700 chr7B 100.000 2252 0 0 1 2252 700540758 700543009 0.000000e+00 4159
1 TraesCS7B01G432700 chr7D 91.214 1252 80 13 321 1552 611315609 611316850 0.000000e+00 1676
2 TraesCS7B01G432700 chr7D 87.900 281 27 5 1551 1829 297760178 297759903 7.760000e-85 324
3 TraesCS7B01G432700 chr7D 86.517 267 34 2 1833 2098 611316853 611317118 2.190000e-75 292
4 TraesCS7B01G432700 chr7D 83.333 330 35 11 1 325 611315255 611315569 1.020000e-73 287
5 TraesCS7B01G432700 chr7A 90.359 1255 78 25 322 1553 701369069 701370303 0.000000e+00 1607
6 TraesCS7B01G432700 chr7A 87.616 323 15 13 1249 1553 701380297 701380612 3.560000e-93 351
7 TraesCS7B01G432700 chr7A 84.133 271 35 3 1828 2097 701370300 701370563 2.870000e-64 255
8 TraesCS7B01G432700 chr7A 84.133 271 35 3 1828 2097 701380609 701380872 2.870000e-64 255
9 TraesCS7B01G432700 chr5D 88.194 288 26 5 1547 1831 365507326 365507608 9.960000e-89 337
10 TraesCS7B01G432700 chr1D 88.112 286 26 5 1550 1832 137147318 137147598 1.290000e-87 333
11 TraesCS7B01G432700 chr1D 87.372 293 27 6 1544 1832 316014770 316014484 6.000000e-86 327
12 TraesCS7B01G432700 chr6D 87.986 283 28 3 1550 1829 168723714 168723993 1.670000e-86 329
13 TraesCS7B01G432700 chr1B 88.129 278 28 3 1553 1829 384652144 384651871 2.160000e-85 326
14 TraesCS7B01G432700 chr2D 87.719 285 25 6 1550 1829 256866351 256866630 7.760000e-85 324
15 TraesCS7B01G432700 chr2D 79.126 206 29 12 1022 1220 421814848 421815046 1.820000e-26 130
16 TraesCS7B01G432700 chr2A 87.542 297 15 11 1272 1553 735425821 735425532 7.760000e-85 324
17 TraesCS7B01G432700 chr2A 84.133 271 35 3 1828 2097 735425535 735425272 2.870000e-64 255
18 TraesCS7B01G432700 chr2A 79.227 207 27 12 1022 1220 568301091 568301289 1.820000e-26 130
19 TraesCS7B01G432700 chr3D 87.456 287 27 6 1550 1832 222645866 222646147 2.790000e-84 322
20 TraesCS7B01G432700 chrUn 87.500 280 27 5 1553 1829 183137943 183138217 1.300000e-82 316


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G432700 chr7B 700540758 700543009 2251 False 4159.000000 4159 100.000000 1 2252 1 chr7B.!!$F1 2251
1 TraesCS7B01G432700 chr7D 611315255 611317118 1863 False 751.666667 1676 87.021333 1 2098 3 chr7D.!!$F1 2097
2 TraesCS7B01G432700 chr7A 701369069 701370563 1494 False 931.000000 1607 87.246000 322 2097 2 chr7A.!!$F1 1775
3 TraesCS7B01G432700 chr7A 701380297 701380872 575 False 303.000000 351 85.874500 1249 2097 2 chr7A.!!$F2 848
4 TraesCS7B01G432700 chr2A 735425272 735425821 549 True 289.500000 324 85.837500 1272 2097 2 chr2A.!!$R1 825

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
801 857 0.034059 GCCGGACATCTCGATCCAAT 59.966 55.0 5.05 0.0 34.35 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2229 2314 0.027716 CATTGCGACATCTGAGCAGC 59.972 55.0 0.0 0.0 42.19 5.25 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 2.934886 ACAAAACATTTGCCATGCCT 57.065 40.000 2.88 0.00 0.00 4.75
31 32 3.795905 CCATGCCTGGCAGGTTTT 58.204 55.556 32.80 16.21 43.65 2.43
35 36 0.681175 ATGCCTGGCAGGTTTTTCAC 59.319 50.000 32.80 15.87 43.65 3.18
40 41 2.168313 CCTGGCAGGTTTTTCACAGTTT 59.832 45.455 25.74 0.00 0.00 2.66
41 42 3.369366 CCTGGCAGGTTTTTCACAGTTTT 60.369 43.478 25.74 0.00 0.00 2.43
53 54 8.447053 GTTTTTCACAGTTTTATTTGCTTCCAA 58.553 29.630 0.00 0.00 0.00 3.53
66 67 2.027385 GCTTCCAAATCCATGGTCTCC 58.973 52.381 12.58 0.00 41.46 3.71
82 83 1.749334 CTCCCCGACATAGCACCTCC 61.749 65.000 0.00 0.00 0.00 4.30
89 90 0.547712 ACATAGCACCTCCCCACTGT 60.548 55.000 0.00 0.00 0.00 3.55
93 94 1.145571 AGCACCTCCCCACTGTTTTA 58.854 50.000 0.00 0.00 0.00 1.52
102 103 5.395768 CCTCCCCACTGTTTTATCACTCTAG 60.396 48.000 0.00 0.00 0.00 2.43
103 104 5.091552 TCCCCACTGTTTTATCACTCTAGT 58.908 41.667 0.00 0.00 0.00 2.57
109 111 7.984050 CCACTGTTTTATCACTCTAGTCATGAT 59.016 37.037 0.00 9.85 36.95 2.45
139 141 0.912486 CCCTCCCCTCGATCAAAACT 59.088 55.000 0.00 0.00 0.00 2.66
141 143 2.706190 CCCTCCCCTCGATCAAAACTAT 59.294 50.000 0.00 0.00 0.00 2.12
181 183 2.288961 GCTAAGTAGCTAACACCGCA 57.711 50.000 0.00 0.00 45.62 5.69
182 184 2.613691 GCTAAGTAGCTAACACCGCAA 58.386 47.619 0.00 0.00 45.62 4.85
183 185 3.195661 GCTAAGTAGCTAACACCGCAAT 58.804 45.455 0.00 0.00 45.62 3.56
184 186 3.001330 GCTAAGTAGCTAACACCGCAATG 59.999 47.826 0.00 0.00 45.62 2.82
185 187 2.762535 AGTAGCTAACACCGCAATGT 57.237 45.000 0.00 0.00 0.00 2.71
186 188 2.618053 AGTAGCTAACACCGCAATGTC 58.382 47.619 0.00 0.00 30.55 3.06
187 189 1.664151 GTAGCTAACACCGCAATGTCC 59.336 52.381 0.00 0.00 30.55 4.02
188 190 0.676782 AGCTAACACCGCAATGTCCC 60.677 55.000 0.00 0.00 30.55 4.46
255 260 9.179909 CCTAGTGGTAATCATATATTCGACTCT 57.820 37.037 0.00 0.00 0.00 3.24
257 262 7.831753 AGTGGTAATCATATATTCGACTCTGG 58.168 38.462 0.00 0.00 0.00 3.86
275 280 5.023533 TCTGGAACAACCACTATATCAGC 57.976 43.478 0.00 0.00 44.64 4.26
276 281 4.716784 TCTGGAACAACCACTATATCAGCT 59.283 41.667 0.00 0.00 44.64 4.24
279 284 3.845781 ACAACCACTATATCAGCTGGG 57.154 47.619 15.13 7.65 32.66 4.45
332 381 9.793252 CATAGATTATCAGGGTTTTCACTTTTG 57.207 33.333 0.00 0.00 0.00 2.44
334 383 8.934023 AGATTATCAGGGTTTTCACTTTTGTA 57.066 30.769 0.00 0.00 0.00 2.41
352 401 9.856162 ACTTTTGTAGGTTATCAAGGTTTCTTA 57.144 29.630 0.00 0.00 0.00 2.10
362 411 9.449719 GTTATCAAGGTTTCTTATTCTTCTCCA 57.550 33.333 0.00 0.00 0.00 3.86
371 420 8.672815 GTTTCTTATTCTTCTCCATCTTCCTTG 58.327 37.037 0.00 0.00 0.00 3.61
420 469 0.442310 CGCATTCCGTGAACGAACAT 59.558 50.000 4.03 0.00 43.02 2.71
446 498 7.793036 ACCCTACAAGAAGAACCATAAGATAC 58.207 38.462 0.00 0.00 0.00 2.24
450 502 9.892130 CTACAAGAAGAACCATAAGATACCTTT 57.108 33.333 0.00 0.00 33.94 3.11
489 541 2.440409 ACCTTTTGGCATAGTGCTCTG 58.560 47.619 0.00 0.00 44.28 3.35
572 626 4.261363 GCAGCATAACAAGGGAAAGATAGC 60.261 45.833 0.00 0.00 0.00 2.97
582 636 7.633789 ACAAGGGAAAGATAGCATAAAGAGAA 58.366 34.615 0.00 0.00 0.00 2.87
614 668 2.479560 GGTAAATGCATGCGTTCCTTCC 60.480 50.000 24.76 18.69 0.00 3.46
637 691 2.925706 TAGGGGTGCTGGTGCGAA 60.926 61.111 0.00 0.00 43.34 4.70
638 692 2.859273 CTAGGGGTGCTGGTGCGAAG 62.859 65.000 0.00 0.00 43.34 3.79
676 730 2.256461 CCACGCTTGCTTTCTGCC 59.744 61.111 0.00 0.00 42.00 4.85
677 731 2.256461 CACGCTTGCTTTCTGCCC 59.744 61.111 0.00 0.00 42.00 5.36
680 734 2.260743 GCTTGCTTTCTGCCCTGC 59.739 61.111 0.00 0.00 42.00 4.85
683 737 4.648626 TGCTTTCTGCCCTGCGCT 62.649 61.111 9.73 0.00 42.00 5.92
685 739 2.359107 CTTTCTGCCCTGCGCTCA 60.359 61.111 9.73 0.20 38.78 4.26
704 760 4.742659 GCTCATATAATTAGCTAGCGCTCC 59.257 45.833 16.34 6.52 45.15 4.70
728 784 4.447325 CCTCATCTCATCATCAACCCCATT 60.447 45.833 0.00 0.00 0.00 3.16
729 785 5.221986 CCTCATCTCATCATCAACCCCATTA 60.222 44.000 0.00 0.00 0.00 1.90
733 789 4.141205 TCTCATCATCAACCCCATTATGCA 60.141 41.667 0.00 0.00 0.00 3.96
760 816 3.119137 TGATGCGAATACTATAGCGGCAT 60.119 43.478 13.15 13.15 0.00 4.40
765 821 4.672409 CGAATACTATAGCGGCATGATCA 58.328 43.478 1.45 0.00 0.00 2.92
766 822 5.284864 CGAATACTATAGCGGCATGATCAT 58.715 41.667 1.18 1.18 0.00 2.45
783 839 4.134623 TGGCCGTCCAAATATCGC 57.865 55.556 0.00 0.00 39.99 4.58
801 857 0.034059 GCCGGACATCTCGATCCAAT 59.966 55.000 5.05 0.00 34.35 3.16
806 862 2.158900 GGACATCTCGATCCAATGGTGT 60.159 50.000 0.00 0.00 34.87 4.16
818 874 2.103771 CCAATGGTGTGATCGATCCTCT 59.896 50.000 22.31 0.00 0.00 3.69
936 992 7.328277 TCACTTTCTCTATGCTTCTCTAGTC 57.672 40.000 0.00 0.00 0.00 2.59
938 994 7.282224 TCACTTTCTCTATGCTTCTCTAGTCTC 59.718 40.741 0.00 0.00 0.00 3.36
939 995 7.283127 CACTTTCTCTATGCTTCTCTAGTCTCT 59.717 40.741 0.00 0.00 0.00 3.10
940 996 8.491134 ACTTTCTCTATGCTTCTCTAGTCTCTA 58.509 37.037 0.00 0.00 0.00 2.43
955 1011 7.186021 CTAGTCTCTACTAGCTAGCAAGTTC 57.814 44.000 20.91 11.95 46.53 3.01
960 1016 5.511363 TCTACTAGCTAGCAAGTTCCTCTT 58.489 41.667 20.91 0.00 36.75 2.85
979 1035 4.759782 TCTTACTAGGCAGCAAGCTAAAG 58.240 43.478 0.00 0.00 44.79 1.85
987 1043 3.004024 CAGCAAGCTAAAGTTGGTGTG 57.996 47.619 6.41 0.00 44.62 3.82
991 1047 2.554032 CAAGCTAAAGTTGGTGTGGAGG 59.446 50.000 0.00 0.00 0.00 4.30
995 1051 2.271944 AAAGTTGGTGTGGAGGTAGC 57.728 50.000 0.00 0.00 0.00 3.58
1038 1094 2.454336 TCTCCTTCTTCTGCCCGATA 57.546 50.000 0.00 0.00 0.00 2.92
1242 1304 1.971695 GGCACCACCAACACCTAGC 60.972 63.158 0.00 0.00 38.86 3.42
1243 1305 1.073199 GCACCACCAACACCTAGCT 59.927 57.895 0.00 0.00 0.00 3.32
1244 1306 0.323629 GCACCACCAACACCTAGCTA 59.676 55.000 0.00 0.00 0.00 3.32
1245 1307 1.944430 GCACCACCAACACCTAGCTAC 60.944 57.143 0.00 0.00 0.00 3.58
1246 1308 1.623811 CACCACCAACACCTAGCTACT 59.376 52.381 0.00 0.00 0.00 2.57
1247 1309 1.900486 ACCACCAACACCTAGCTACTC 59.100 52.381 0.00 0.00 0.00 2.59
1515 1599 6.918892 TGTATAGTGTGTTTCCATGCATAC 57.081 37.500 0.00 0.00 0.00 2.39
1521 1605 4.065789 TGTGTTTCCATGCATACGTGTTA 58.934 39.130 0.00 0.00 0.00 2.41
1530 1614 6.094742 TCCATGCATACGTGTTATGTTTGATT 59.905 34.615 0.00 0.00 40.02 2.57
1553 1637 4.184629 AGTACTTCAGCGGATTTGCTAAG 58.815 43.478 0.00 0.00 45.23 2.18
1554 1638 3.334583 ACTTCAGCGGATTTGCTAAGA 57.665 42.857 10.01 0.00 45.23 2.10
1555 1639 3.003480 ACTTCAGCGGATTTGCTAAGAC 58.997 45.455 10.01 0.00 45.23 3.01
1556 1640 3.265791 CTTCAGCGGATTTGCTAAGACT 58.734 45.455 0.00 0.00 45.23 3.24
1557 1641 4.081642 ACTTCAGCGGATTTGCTAAGACTA 60.082 41.667 10.01 0.00 45.23 2.59
1558 1642 4.046938 TCAGCGGATTTGCTAAGACTAG 57.953 45.455 0.00 0.00 45.23 2.57
1568 1652 2.565841 GCTAAGACTAGCCACAATGGG 58.434 52.381 0.00 0.00 44.22 4.00
1569 1653 2.746472 GCTAAGACTAGCCACAATGGGG 60.746 54.545 0.00 0.00 44.22 4.96
1570 1654 1.668826 AAGACTAGCCACAATGGGGA 58.331 50.000 5.31 0.00 38.19 4.81
1571 1655 1.207791 AGACTAGCCACAATGGGGAG 58.792 55.000 5.31 0.00 38.19 4.30
1572 1656 0.912486 GACTAGCCACAATGGGGAGT 59.088 55.000 5.31 0.00 38.19 3.85
1573 1657 2.116238 GACTAGCCACAATGGGGAGTA 58.884 52.381 5.31 0.00 38.19 2.59
1574 1658 2.504175 GACTAGCCACAATGGGGAGTAA 59.496 50.000 5.31 0.00 38.19 2.24
1575 1659 3.123273 ACTAGCCACAATGGGGAGTAAT 58.877 45.455 5.31 0.00 38.19 1.89
1576 1660 3.527665 ACTAGCCACAATGGGGAGTAATT 59.472 43.478 5.31 0.00 38.19 1.40
1577 1661 3.473113 AGCCACAATGGGGAGTAATTT 57.527 42.857 5.31 0.00 38.19 1.82
1578 1662 4.601406 AGCCACAATGGGGAGTAATTTA 57.399 40.909 5.31 0.00 38.19 1.40
1579 1663 4.536765 AGCCACAATGGGGAGTAATTTAG 58.463 43.478 5.31 0.00 38.19 1.85
1580 1664 4.229582 AGCCACAATGGGGAGTAATTTAGA 59.770 41.667 5.31 0.00 38.19 2.10
1581 1665 4.338400 GCCACAATGGGGAGTAATTTAGAC 59.662 45.833 5.31 0.00 38.19 2.59
1582 1666 5.755849 CCACAATGGGGAGTAATTTAGACT 58.244 41.667 0.00 0.00 32.67 3.24
1583 1667 6.634039 GCCACAATGGGGAGTAATTTAGACTA 60.634 42.308 5.31 0.00 38.19 2.59
1584 1668 6.992715 CCACAATGGGGAGTAATTTAGACTAG 59.007 42.308 0.00 0.00 32.67 2.57
1585 1669 7.365652 CCACAATGGGGAGTAATTTAGACTAGT 60.366 40.741 0.00 0.00 32.67 2.57
1586 1670 8.701895 CACAATGGGGAGTAATTTAGACTAGTA 58.298 37.037 0.00 0.00 0.00 1.82
1587 1671 9.275572 ACAATGGGGAGTAATTTAGACTAGTAA 57.724 33.333 0.00 0.00 0.00 2.24
1632 1716 9.233649 AGTGTATGTTACTATCTCTATAGTGGC 57.766 37.037 8.04 2.61 46.28 5.01
1633 1717 9.011095 GTGTATGTTACTATCTCTATAGTGGCA 57.989 37.037 8.04 7.12 46.28 4.92
1634 1718 9.582648 TGTATGTTACTATCTCTATAGTGGCAA 57.417 33.333 8.04 0.00 46.28 4.52
1636 1720 8.713708 ATGTTACTATCTCTATAGTGGCAAGT 57.286 34.615 8.04 5.11 46.28 3.16
1637 1721 9.809395 ATGTTACTATCTCTATAGTGGCAAGTA 57.191 33.333 8.04 4.27 46.28 2.24
1638 1722 9.636789 TGTTACTATCTCTATAGTGGCAAGTAA 57.363 33.333 8.04 14.07 46.28 2.24
1639 1723 9.896263 GTTACTATCTCTATAGTGGCAAGTAAC 57.104 37.037 22.06 22.06 46.28 2.50
1640 1724 9.636789 TTACTATCTCTATAGTGGCAAGTAACA 57.363 33.333 8.04 0.00 46.28 2.41
1641 1725 8.713708 ACTATCTCTATAGTGGCAAGTAACAT 57.286 34.615 0.00 0.00 45.34 2.71
1642 1726 8.580720 ACTATCTCTATAGTGGCAAGTAACATG 58.419 37.037 0.00 0.00 45.34 3.21
1643 1727 6.791867 TCTCTATAGTGGCAAGTAACATGT 57.208 37.500 0.00 0.00 0.00 3.21
1644 1728 6.573434 TCTCTATAGTGGCAAGTAACATGTG 58.427 40.000 0.00 0.00 0.00 3.21
1645 1729 6.154534 TCTCTATAGTGGCAAGTAACATGTGT 59.845 38.462 0.00 0.00 0.00 3.72
1646 1730 6.106003 TCTATAGTGGCAAGTAACATGTGTG 58.894 40.000 0.00 0.00 0.00 3.82
1647 1731 2.930950 AGTGGCAAGTAACATGTGTGT 58.069 42.857 0.00 0.00 41.28 3.72
1648 1732 2.618241 AGTGGCAAGTAACATGTGTGTG 59.382 45.455 0.00 0.00 38.92 3.82
1649 1733 2.616376 GTGGCAAGTAACATGTGTGTGA 59.384 45.455 0.00 0.00 38.92 3.58
1650 1734 3.253188 GTGGCAAGTAACATGTGTGTGAT 59.747 43.478 0.00 0.00 38.92 3.06
1651 1735 4.454161 GTGGCAAGTAACATGTGTGTGATA 59.546 41.667 0.00 0.00 38.92 2.15
1652 1736 5.123820 GTGGCAAGTAACATGTGTGTGATAT 59.876 40.000 0.00 0.00 38.92 1.63
1653 1737 5.353956 TGGCAAGTAACATGTGTGTGATATC 59.646 40.000 0.00 0.00 38.92 1.63
1654 1738 5.353956 GGCAAGTAACATGTGTGTGATATCA 59.646 40.000 0.00 0.00 38.92 2.15
1655 1739 6.038603 GGCAAGTAACATGTGTGTGATATCAT 59.961 38.462 9.02 0.00 38.92 2.45
1656 1740 7.226523 GGCAAGTAACATGTGTGTGATATCATA 59.773 37.037 9.02 2.88 38.92 2.15
1657 1741 8.064222 GCAAGTAACATGTGTGTGATATCATAC 58.936 37.037 21.93 21.93 38.92 2.39
1658 1742 9.097257 CAAGTAACATGTGTGTGATATCATACA 57.903 33.333 26.03 26.03 43.97 2.29
1659 1743 9.665719 AAGTAACATGTGTGTGATATCATACAA 57.334 29.630 29.83 21.45 46.76 2.41
1660 1744 9.098355 AGTAACATGTGTGTGATATCATACAAC 57.902 33.333 29.83 23.34 46.76 3.32
1661 1745 7.920160 AACATGTGTGTGATATCATACAACA 57.080 32.000 29.83 27.01 46.76 3.33
1662 1746 7.307493 ACATGTGTGTGATATCATACAACAC 57.693 36.000 29.83 26.06 46.76 3.32
1663 1747 7.105588 ACATGTGTGTGATATCATACAACACT 58.894 34.615 29.83 17.52 46.76 3.55
1664 1748 7.607607 ACATGTGTGTGATATCATACAACACTT 59.392 33.333 29.83 22.41 46.76 3.16
1665 1749 7.595311 TGTGTGTGATATCATACAACACTTC 57.405 36.000 29.83 19.29 46.76 3.01
1666 1750 7.158021 TGTGTGTGATATCATACAACACTTCA 58.842 34.615 29.83 21.16 46.76 3.02
1667 1751 7.823799 TGTGTGTGATATCATACAACACTTCAT 59.176 33.333 29.83 0.00 46.76 2.57
1668 1752 8.668353 GTGTGTGATATCATACAACACTTCATT 58.332 33.333 29.83 0.00 46.76 2.57
1669 1753 9.230122 TGTGTGATATCATACAACACTTCATTT 57.770 29.630 27.17 0.00 43.38 2.32
1682 1766 9.344772 ACAACACTTCATTTATTAGGTTGTACA 57.655 29.630 0.00 0.00 43.85 2.90
1683 1767 9.607285 CAACACTTCATTTATTAGGTTGTACAC 57.393 33.333 0.00 0.00 32.10 2.90
1684 1768 9.569122 AACACTTCATTTATTAGGTTGTACACT 57.431 29.630 0.00 0.00 0.00 3.55
1685 1769 9.216117 ACACTTCATTTATTAGGTTGTACACTC 57.784 33.333 0.00 0.00 0.00 3.51
1686 1770 9.214957 CACTTCATTTATTAGGTTGTACACTCA 57.785 33.333 0.00 0.00 0.00 3.41
1687 1771 9.959721 ACTTCATTTATTAGGTTGTACACTCAT 57.040 29.630 0.00 0.00 0.00 2.90
1692 1776 9.959721 ATTTATTAGGTTGTACACTCATCTTGT 57.040 29.630 0.00 0.00 0.00 3.16
1693 1777 8.997621 TTATTAGGTTGTACACTCATCTTGTC 57.002 34.615 0.00 0.00 0.00 3.18
1694 1778 6.665992 TTAGGTTGTACACTCATCTTGTCT 57.334 37.500 0.00 0.00 0.00 3.41
1695 1779 5.552870 AGGTTGTACACTCATCTTGTCTT 57.447 39.130 0.00 0.00 0.00 3.01
1696 1780 5.300752 AGGTTGTACACTCATCTTGTCTTG 58.699 41.667 0.00 0.00 0.00 3.02
1697 1781 4.452455 GGTTGTACACTCATCTTGTCTTGG 59.548 45.833 0.00 0.00 0.00 3.61
1698 1782 4.955811 TGTACACTCATCTTGTCTTGGT 57.044 40.909 0.00 0.00 0.00 3.67
1699 1783 6.220930 GTTGTACACTCATCTTGTCTTGGTA 58.779 40.000 0.00 0.00 0.00 3.25
1700 1784 6.605471 TGTACACTCATCTTGTCTTGGTAT 57.395 37.500 0.00 0.00 0.00 2.73
1701 1785 6.398095 TGTACACTCATCTTGTCTTGGTATG 58.602 40.000 0.00 0.00 0.00 2.39
1702 1786 5.489792 ACACTCATCTTGTCTTGGTATGT 57.510 39.130 0.00 0.00 0.00 2.29
1703 1787 5.240891 ACACTCATCTTGTCTTGGTATGTG 58.759 41.667 0.00 0.00 0.00 3.21
1704 1788 5.221722 ACACTCATCTTGTCTTGGTATGTGT 60.222 40.000 0.00 0.00 0.00 3.72
1705 1789 5.121298 CACTCATCTTGTCTTGGTATGTGTG 59.879 44.000 0.00 0.00 36.39 3.82
1706 1790 5.012046 ACTCATCTTGTCTTGGTATGTGTGA 59.988 40.000 0.00 0.00 0.00 3.58
1707 1791 6.053632 TCATCTTGTCTTGGTATGTGTGAT 57.946 37.500 0.00 0.00 0.00 3.06
1708 1792 5.876460 TCATCTTGTCTTGGTATGTGTGATG 59.124 40.000 0.00 0.00 0.00 3.07
1709 1793 5.227569 TCTTGTCTTGGTATGTGTGATGT 57.772 39.130 0.00 0.00 0.00 3.06
1710 1794 5.620206 TCTTGTCTTGGTATGTGTGATGTT 58.380 37.500 0.00 0.00 0.00 2.71
1711 1795 6.764379 TCTTGTCTTGGTATGTGTGATGTTA 58.236 36.000 0.00 0.00 0.00 2.41
1712 1796 7.220740 TCTTGTCTTGGTATGTGTGATGTTAA 58.779 34.615 0.00 0.00 0.00 2.01
1713 1797 7.387673 TCTTGTCTTGGTATGTGTGATGTTAAG 59.612 37.037 0.00 0.00 0.00 1.85
1714 1798 6.530120 TGTCTTGGTATGTGTGATGTTAAGT 58.470 36.000 0.00 0.00 0.00 2.24
1715 1799 7.672240 TGTCTTGGTATGTGTGATGTTAAGTA 58.328 34.615 0.00 0.00 0.00 2.24
1716 1800 8.151596 TGTCTTGGTATGTGTGATGTTAAGTAA 58.848 33.333 0.00 0.00 0.00 2.24
1717 1801 8.440833 GTCTTGGTATGTGTGATGTTAAGTAAC 58.559 37.037 0.00 0.00 36.74 2.50
1718 1802 8.372459 TCTTGGTATGTGTGATGTTAAGTAACT 58.628 33.333 3.07 0.00 37.12 2.24
1719 1803 9.647797 CTTGGTATGTGTGATGTTAAGTAACTA 57.352 33.333 3.07 0.00 37.12 2.24
1720 1804 9.647797 TTGGTATGTGTGATGTTAAGTAACTAG 57.352 33.333 3.07 0.00 37.12 2.57
1721 1805 7.762615 TGGTATGTGTGATGTTAAGTAACTAGC 59.237 37.037 3.07 0.00 37.12 3.42
1722 1806 7.980099 GGTATGTGTGATGTTAAGTAACTAGCT 59.020 37.037 0.00 0.00 37.12 3.32
1725 1809 8.926715 TGTGTGATGTTAAGTAACTAGCTATG 57.073 34.615 0.00 0.00 37.12 2.23
1726 1810 8.528643 TGTGTGATGTTAAGTAACTAGCTATGT 58.471 33.333 0.00 0.00 37.12 2.29
1727 1811 9.367444 GTGTGATGTTAAGTAACTAGCTATGTT 57.633 33.333 11.59 11.59 37.12 2.71
1736 1820 7.772332 AGTAACTAGCTATGTTAACACATGC 57.228 36.000 11.22 14.67 43.92 4.06
1737 1821 6.761714 AGTAACTAGCTATGTTAACACATGCC 59.238 38.462 11.22 2.46 43.92 4.40
1738 1822 5.359194 ACTAGCTATGTTAACACATGCCT 57.641 39.130 11.22 5.96 43.92 4.75
1739 1823 5.360591 ACTAGCTATGTTAACACATGCCTC 58.639 41.667 11.22 0.00 43.92 4.70
1740 1824 4.494091 AGCTATGTTAACACATGCCTCT 57.506 40.909 11.22 0.00 43.92 3.69
1741 1825 4.446371 AGCTATGTTAACACATGCCTCTC 58.554 43.478 11.22 0.00 43.92 3.20
1742 1826 4.163078 AGCTATGTTAACACATGCCTCTCT 59.837 41.667 11.22 0.00 43.92 3.10
1743 1827 4.878397 GCTATGTTAACACATGCCTCTCTT 59.122 41.667 11.22 0.00 43.92 2.85
1744 1828 5.355350 GCTATGTTAACACATGCCTCTCTTT 59.645 40.000 11.22 0.00 43.92 2.52
1745 1829 5.886960 ATGTTAACACATGCCTCTCTTTC 57.113 39.130 11.22 0.00 42.46 2.62
1746 1830 4.973168 TGTTAACACATGCCTCTCTTTCT 58.027 39.130 3.59 0.00 0.00 2.52
1747 1831 5.376625 TGTTAACACATGCCTCTCTTTCTT 58.623 37.500 3.59 0.00 0.00 2.52
1748 1832 5.470098 TGTTAACACATGCCTCTCTTTCTTC 59.530 40.000 3.59 0.00 0.00 2.87
1749 1833 3.777106 ACACATGCCTCTCTTTCTTCA 57.223 42.857 0.00 0.00 0.00 3.02
1750 1834 4.298103 ACACATGCCTCTCTTTCTTCAT 57.702 40.909 0.00 0.00 0.00 2.57
1751 1835 4.660168 ACACATGCCTCTCTTTCTTCATT 58.340 39.130 0.00 0.00 0.00 2.57
1752 1836 5.809001 ACACATGCCTCTCTTTCTTCATTA 58.191 37.500 0.00 0.00 0.00 1.90
1753 1837 5.879223 ACACATGCCTCTCTTTCTTCATTAG 59.121 40.000 0.00 0.00 0.00 1.73
1754 1838 5.879223 CACATGCCTCTCTTTCTTCATTAGT 59.121 40.000 0.00 0.00 0.00 2.24
1755 1839 6.373774 CACATGCCTCTCTTTCTTCATTAGTT 59.626 38.462 0.00 0.00 0.00 2.24
1756 1840 7.550551 CACATGCCTCTCTTTCTTCATTAGTTA 59.449 37.037 0.00 0.00 0.00 2.24
1757 1841 7.550906 ACATGCCTCTCTTTCTTCATTAGTTAC 59.449 37.037 0.00 0.00 0.00 2.50
1758 1842 7.246171 TGCCTCTCTTTCTTCATTAGTTACT 57.754 36.000 0.00 0.00 0.00 2.24
1759 1843 7.680730 TGCCTCTCTTTCTTCATTAGTTACTT 58.319 34.615 0.00 0.00 0.00 2.24
1760 1844 7.604164 TGCCTCTCTTTCTTCATTAGTTACTTG 59.396 37.037 0.00 0.00 0.00 3.16
1761 1845 7.604545 GCCTCTCTTTCTTCATTAGTTACTTGT 59.395 37.037 0.00 0.00 0.00 3.16
1762 1846 9.145865 CCTCTCTTTCTTCATTAGTTACTTGTC 57.854 37.037 0.00 0.00 0.00 3.18
1763 1847 9.698309 CTCTCTTTCTTCATTAGTTACTTGTCA 57.302 33.333 0.00 0.00 0.00 3.58
1764 1848 9.477484 TCTCTTTCTTCATTAGTTACTTGTCAC 57.523 33.333 0.00 0.00 0.00 3.67
1765 1849 9.261180 CTCTTTCTTCATTAGTTACTTGTCACA 57.739 33.333 0.00 0.00 0.00 3.58
1766 1850 9.778741 TCTTTCTTCATTAGTTACTTGTCACAT 57.221 29.630 0.00 0.00 0.00 3.21
1768 1852 9.554395 TTTCTTCATTAGTTACTTGTCACATCA 57.446 29.630 0.00 0.00 0.00 3.07
1769 1853 9.725019 TTCTTCATTAGTTACTTGTCACATCAT 57.275 29.630 0.00 0.00 0.00 2.45
1770 1854 9.371136 TCTTCATTAGTTACTTGTCACATCATC 57.629 33.333 0.00 0.00 0.00 2.92
1771 1855 9.376075 CTTCATTAGTTACTTGTCACATCATCT 57.624 33.333 0.00 0.00 0.00 2.90
1778 1862 8.454106 AGTTACTTGTCACATCATCTATTTTGC 58.546 33.333 0.00 0.00 0.00 3.68
1779 1863 6.199937 ACTTGTCACATCATCTATTTTGCC 57.800 37.500 0.00 0.00 0.00 4.52
1780 1864 5.948162 ACTTGTCACATCATCTATTTTGCCT 59.052 36.000 0.00 0.00 0.00 4.75
1781 1865 5.823209 TGTCACATCATCTATTTTGCCTG 57.177 39.130 0.00 0.00 0.00 4.85
1782 1866 5.499313 TGTCACATCATCTATTTTGCCTGA 58.501 37.500 0.00 0.00 0.00 3.86
1783 1867 5.945191 TGTCACATCATCTATTTTGCCTGAA 59.055 36.000 0.00 0.00 0.00 3.02
1784 1868 6.604396 TGTCACATCATCTATTTTGCCTGAAT 59.396 34.615 0.00 0.00 0.00 2.57
1785 1869 7.774625 TGTCACATCATCTATTTTGCCTGAATA 59.225 33.333 0.00 0.00 0.00 1.75
1786 1870 8.072567 GTCACATCATCTATTTTGCCTGAATAC 58.927 37.037 0.00 0.00 0.00 1.89
1787 1871 7.041848 TCACATCATCTATTTTGCCTGAATACG 60.042 37.037 0.00 0.00 0.00 3.06
1788 1872 6.767902 ACATCATCTATTTTGCCTGAATACGT 59.232 34.615 0.00 0.00 0.00 3.57
1789 1873 6.603237 TCATCTATTTTGCCTGAATACGTG 57.397 37.500 0.00 0.00 0.00 4.49
1790 1874 6.112734 TCATCTATTTTGCCTGAATACGTGT 58.887 36.000 0.00 0.00 0.00 4.49
1791 1875 5.794687 TCTATTTTGCCTGAATACGTGTG 57.205 39.130 0.00 0.00 0.00 3.82
1792 1876 5.483811 TCTATTTTGCCTGAATACGTGTGA 58.516 37.500 0.00 0.00 0.00 3.58
1793 1877 6.112734 TCTATTTTGCCTGAATACGTGTGAT 58.887 36.000 0.00 0.00 0.00 3.06
1794 1878 4.418013 TTTTGCCTGAATACGTGTGATG 57.582 40.909 0.00 0.00 0.00 3.07
1795 1879 2.760634 TGCCTGAATACGTGTGATGT 57.239 45.000 0.00 0.00 0.00 3.06
1796 1880 3.052455 TGCCTGAATACGTGTGATGTT 57.948 42.857 0.00 0.00 0.00 2.71
1797 1881 4.195225 TGCCTGAATACGTGTGATGTTA 57.805 40.909 0.00 0.00 0.00 2.41
1798 1882 3.930229 TGCCTGAATACGTGTGATGTTAC 59.070 43.478 0.00 0.00 0.00 2.50
1799 1883 3.308866 GCCTGAATACGTGTGATGTTACC 59.691 47.826 0.00 0.00 0.00 2.85
1800 1884 4.500127 CCTGAATACGTGTGATGTTACCA 58.500 43.478 0.00 0.00 0.00 3.25
1801 1885 4.328983 CCTGAATACGTGTGATGTTACCAC 59.671 45.833 0.00 0.00 35.23 4.16
1802 1886 4.884247 TGAATACGTGTGATGTTACCACA 58.116 39.130 0.00 0.00 41.68 4.17
1804 1888 6.631962 TGAATACGTGTGATGTTACCACATA 58.368 36.000 0.00 0.00 44.22 2.29
1805 1889 7.269316 TGAATACGTGTGATGTTACCACATAT 58.731 34.615 0.00 0.00 44.22 1.78
1806 1890 7.223777 TGAATACGTGTGATGTTACCACATATG 59.776 37.037 0.00 0.00 44.22 1.78
1807 1891 4.827692 ACGTGTGATGTTACCACATATGT 58.172 39.130 1.41 1.41 44.22 2.29
1808 1892 5.242434 ACGTGTGATGTTACCACATATGTT 58.758 37.500 5.37 0.00 44.22 2.71
1809 1893 6.399743 ACGTGTGATGTTACCACATATGTTA 58.600 36.000 5.37 0.00 44.22 2.41
1810 1894 6.311935 ACGTGTGATGTTACCACATATGTTAC 59.688 38.462 5.37 3.21 44.22 2.50
1811 1895 6.533723 CGTGTGATGTTACCACATATGTTACT 59.466 38.462 5.37 0.00 44.22 2.24
1812 1896 7.064134 CGTGTGATGTTACCACATATGTTACTT 59.936 37.037 5.37 1.11 44.22 2.24
1813 1897 8.388103 GTGTGATGTTACCACATATGTTACTTC 58.612 37.037 5.37 9.88 44.22 3.01
1814 1898 7.551262 TGTGATGTTACCACATATGTTACTTCC 59.449 37.037 5.37 5.57 44.22 3.46
1815 1899 7.551262 GTGATGTTACCACATATGTTACTTCCA 59.449 37.037 5.37 0.00 44.22 3.53
1816 1900 8.271458 TGATGTTACCACATATGTTACTTCCAT 58.729 33.333 5.37 4.69 44.22 3.41
1817 1901 9.120538 GATGTTACCACATATGTTACTTCCATT 57.879 33.333 5.37 0.00 44.22 3.16
1818 1902 8.275015 TGTTACCACATATGTTACTTCCATTG 57.725 34.615 5.37 0.00 0.00 2.82
1819 1903 7.885922 TGTTACCACATATGTTACTTCCATTGT 59.114 33.333 5.37 0.00 0.00 2.71
1820 1904 6.757897 ACCACATATGTTACTTCCATTGTG 57.242 37.500 5.37 0.00 34.61 3.33
1821 1905 5.652014 ACCACATATGTTACTTCCATTGTGG 59.348 40.000 20.53 20.53 45.10 4.17
1822 1906 5.067674 CCACATATGTTACTTCCATTGTGGG 59.932 44.000 5.37 0.00 41.49 4.61
1823 1907 5.652014 CACATATGTTACTTCCATTGTGGGT 59.348 40.000 5.37 0.00 38.32 4.51
1824 1908 6.826231 CACATATGTTACTTCCATTGTGGGTA 59.174 38.462 5.37 0.00 38.32 3.69
1825 1909 7.012327 CACATATGTTACTTCCATTGTGGGTAG 59.988 40.741 5.37 0.00 38.32 3.18
1826 1910 4.986054 TGTTACTTCCATTGTGGGTAGT 57.014 40.909 8.82 8.82 38.32 2.73
1827 1911 4.901868 TGTTACTTCCATTGTGGGTAGTC 58.098 43.478 7.59 0.00 38.32 2.59
1828 1912 4.595781 TGTTACTTCCATTGTGGGTAGTCT 59.404 41.667 7.59 0.00 38.32 3.24
1829 1913 5.781306 TGTTACTTCCATTGTGGGTAGTCTA 59.219 40.000 7.59 0.00 38.32 2.59
1830 1914 6.270463 TGTTACTTCCATTGTGGGTAGTCTAA 59.730 38.462 7.59 0.00 38.32 2.10
1831 1915 5.422214 ACTTCCATTGTGGGTAGTCTAAG 57.578 43.478 0.00 0.00 38.32 2.18
1837 1921 4.595762 TTGTGGGTAGTCTAAGTCACAC 57.404 45.455 9.40 3.51 35.28 3.82
1850 1934 6.090898 GTCTAAGTCACACGCAACTGATTATT 59.909 38.462 0.00 0.00 0.00 1.40
1851 1935 7.274904 GTCTAAGTCACACGCAACTGATTATTA 59.725 37.037 0.00 0.00 0.00 0.98
1852 1936 5.779806 AGTCACACGCAACTGATTATTAC 57.220 39.130 0.00 0.00 0.00 1.89
1855 1939 6.015504 GTCACACGCAACTGATTATTACTTG 58.984 40.000 0.00 0.00 0.00 3.16
1859 1943 4.142687 ACGCAACTGATTATTACTTGTGCC 60.143 41.667 0.00 0.00 0.00 5.01
1860 1944 4.672409 GCAACTGATTATTACTTGTGCCC 58.328 43.478 0.00 0.00 0.00 5.36
1864 1948 4.227300 ACTGATTATTACTTGTGCCCCTCA 59.773 41.667 0.00 0.00 0.00 3.86
1870 1954 2.683211 ACTTGTGCCCCTCAATTTCT 57.317 45.000 0.00 0.00 0.00 2.52
1872 1956 2.108952 ACTTGTGCCCCTCAATTTCTCT 59.891 45.455 0.00 0.00 0.00 3.10
1875 1959 0.405198 TGCCCCTCAATTTCTCTGCA 59.595 50.000 0.00 0.00 0.00 4.41
1876 1960 1.006281 TGCCCCTCAATTTCTCTGCAT 59.994 47.619 0.00 0.00 0.00 3.96
1881 1965 3.349927 CCTCAATTTCTCTGCATGGTGA 58.650 45.455 0.00 0.00 0.00 4.02
1882 1966 3.377485 CCTCAATTTCTCTGCATGGTGAG 59.623 47.826 0.00 0.00 0.00 3.51
1883 1967 2.751259 TCAATTTCTCTGCATGGTGAGC 59.249 45.455 0.00 0.00 0.00 4.26
1944 2028 2.183046 GAGGAGTGAGCTGGCGAC 59.817 66.667 0.00 0.00 0.00 5.19
1989 2073 0.325296 ATGGAGGCGAGTTGGAGGTA 60.325 55.000 0.00 0.00 0.00 3.08
1992 2076 0.824759 GAGGCGAGTTGGAGGTATGT 59.175 55.000 0.00 0.00 0.00 2.29
2009 2093 3.379445 TCGGGTTCAGGTCGGAGC 61.379 66.667 0.00 0.00 0.00 4.70
2072 2157 1.590259 GAGATGCGAACTCCGAGGC 60.590 63.158 0.00 0.00 41.76 4.70
2073 2158 2.184322 GATGCGAACTCCGAGGCA 59.816 61.111 0.00 0.26 41.76 4.75
2090 2175 1.153289 CATGGGAAGTCAGGGCTCG 60.153 63.158 0.00 0.00 0.00 5.03
2091 2176 2.370445 ATGGGAAGTCAGGGCTCGG 61.370 63.158 0.00 0.00 0.00 4.63
2098 2183 0.178975 AGTCAGGGCTCGGATAGGAG 60.179 60.000 0.00 0.00 37.11 3.69
2099 2184 0.178987 GTCAGGGCTCGGATAGGAGA 60.179 60.000 0.00 0.00 36.08 3.71
2100 2185 0.556258 TCAGGGCTCGGATAGGAGAA 59.444 55.000 0.00 0.00 36.08 2.87
2101 2186 1.063190 TCAGGGCTCGGATAGGAGAAA 60.063 52.381 0.00 0.00 36.08 2.52
2102 2187 1.342819 CAGGGCTCGGATAGGAGAAAG 59.657 57.143 0.00 0.00 36.08 2.62
2103 2188 0.682292 GGGCTCGGATAGGAGAAAGG 59.318 60.000 0.00 0.00 36.08 3.11
2104 2189 0.034198 GGCTCGGATAGGAGAAAGGC 59.966 60.000 0.00 0.00 36.08 4.35
2105 2190 0.753262 GCTCGGATAGGAGAAAGGCA 59.247 55.000 0.00 0.00 36.08 4.75
2106 2191 1.270041 GCTCGGATAGGAGAAAGGCAG 60.270 57.143 0.00 0.00 36.08 4.85
2107 2192 1.342819 CTCGGATAGGAGAAAGGCAGG 59.657 57.143 0.00 0.00 36.08 4.85
2108 2193 0.394565 CGGATAGGAGAAAGGCAGGG 59.605 60.000 0.00 0.00 0.00 4.45
2109 2194 0.109532 GGATAGGAGAAAGGCAGGGC 59.890 60.000 0.00 0.00 0.00 5.19
2110 2195 0.839946 GATAGGAGAAAGGCAGGGCA 59.160 55.000 0.00 0.00 0.00 5.36
2111 2196 0.548510 ATAGGAGAAAGGCAGGGCAC 59.451 55.000 0.00 0.00 0.00 5.01
2112 2197 0.840288 TAGGAGAAAGGCAGGGCACA 60.840 55.000 0.00 0.00 0.00 4.57
2113 2198 1.228552 GGAGAAAGGCAGGGCACAA 60.229 57.895 0.00 0.00 0.00 3.33
2114 2199 1.527433 GGAGAAAGGCAGGGCACAAC 61.527 60.000 0.00 0.00 0.00 3.32
2115 2200 0.538287 GAGAAAGGCAGGGCACAACT 60.538 55.000 0.00 0.00 0.00 3.16
2116 2201 0.825010 AGAAAGGCAGGGCACAACTG 60.825 55.000 0.00 0.00 38.95 3.16
2117 2202 1.809567 GAAAGGCAGGGCACAACTGG 61.810 60.000 0.00 0.00 36.48 4.00
2118 2203 2.296945 AAAGGCAGGGCACAACTGGA 62.297 55.000 0.00 0.00 36.48 3.86
2119 2204 2.674380 GGCAGGGCACAACTGGAG 60.674 66.667 0.00 0.00 36.48 3.86
2120 2205 2.674380 GCAGGGCACAACTGGAGG 60.674 66.667 0.00 0.00 36.48 4.30
2121 2206 3.160585 CAGGGCACAACTGGAGGA 58.839 61.111 0.00 0.00 32.38 3.71
2122 2207 1.455849 CAGGGCACAACTGGAGGAA 59.544 57.895 0.00 0.00 32.38 3.36
2123 2208 0.607489 CAGGGCACAACTGGAGGAAG 60.607 60.000 0.00 0.00 32.38 3.46
2124 2209 0.768221 AGGGCACAACTGGAGGAAGA 60.768 55.000 0.00 0.00 0.00 2.87
2125 2210 0.322008 GGGCACAACTGGAGGAAGAG 60.322 60.000 0.00 0.00 0.00 2.85
2126 2211 0.398318 GGCACAACTGGAGGAAGAGT 59.602 55.000 0.00 0.00 0.00 3.24
2127 2212 1.517242 GCACAACTGGAGGAAGAGTG 58.483 55.000 0.00 0.00 33.19 3.51
2128 2213 1.070758 GCACAACTGGAGGAAGAGTGA 59.929 52.381 0.00 0.00 32.38 3.41
2129 2214 2.485479 GCACAACTGGAGGAAGAGTGAA 60.485 50.000 0.00 0.00 32.38 3.18
2130 2215 3.134458 CACAACTGGAGGAAGAGTGAAC 58.866 50.000 0.00 0.00 32.38 3.18
2131 2216 2.224066 ACAACTGGAGGAAGAGTGAACG 60.224 50.000 0.00 0.00 0.00 3.95
2132 2217 0.969894 ACTGGAGGAAGAGTGAACGG 59.030 55.000 0.00 0.00 0.00 4.44
2133 2218 1.257743 CTGGAGGAAGAGTGAACGGA 58.742 55.000 0.00 0.00 0.00 4.69
2134 2219 0.966920 TGGAGGAAGAGTGAACGGAC 59.033 55.000 0.00 0.00 0.00 4.79
2135 2220 1.258676 GGAGGAAGAGTGAACGGACT 58.741 55.000 0.00 0.00 0.00 3.85
2136 2221 1.619332 GGAGGAAGAGTGAACGGACTT 59.381 52.381 0.00 0.00 0.00 3.01
2137 2222 2.352912 GGAGGAAGAGTGAACGGACTTC 60.353 54.545 0.00 0.00 38.26 3.01
2138 2223 2.559231 GAGGAAGAGTGAACGGACTTCT 59.441 50.000 0.00 0.00 38.78 2.85
2139 2224 2.297597 AGGAAGAGTGAACGGACTTCTG 59.702 50.000 0.00 0.00 38.78 3.02
2140 2225 2.296471 GGAAGAGTGAACGGACTTCTGA 59.704 50.000 0.00 0.00 38.78 3.27
2141 2226 3.570559 GAAGAGTGAACGGACTTCTGAG 58.429 50.000 0.00 0.00 36.72 3.35
2142 2227 1.271102 AGAGTGAACGGACTTCTGAGC 59.729 52.381 0.00 0.00 0.00 4.26
2143 2228 1.000163 GAGTGAACGGACTTCTGAGCA 60.000 52.381 0.00 0.00 0.00 4.26
2144 2229 1.412710 AGTGAACGGACTTCTGAGCAA 59.587 47.619 0.00 0.00 0.00 3.91
2145 2230 1.527311 GTGAACGGACTTCTGAGCAAC 59.473 52.381 0.00 0.00 0.00 4.17
2146 2231 1.412710 TGAACGGACTTCTGAGCAACT 59.587 47.619 0.00 0.00 0.00 3.16
2147 2232 2.062519 GAACGGACTTCTGAGCAACTC 58.937 52.381 0.00 0.00 0.00 3.01
2148 2233 1.333177 ACGGACTTCTGAGCAACTCT 58.667 50.000 0.00 0.00 0.00 3.24
2149 2234 1.000283 ACGGACTTCTGAGCAACTCTG 60.000 52.381 0.00 0.00 0.00 3.35
2150 2235 1.270826 CGGACTTCTGAGCAACTCTGA 59.729 52.381 0.61 0.61 36.83 3.27
2151 2236 2.670789 CGGACTTCTGAGCAACTCTGAG 60.671 54.545 2.45 2.45 39.07 3.35
2152 2237 2.336667 GACTTCTGAGCAACTCTGAGC 58.663 52.381 4.19 0.00 39.07 4.26
2153 2238 1.690893 ACTTCTGAGCAACTCTGAGCA 59.309 47.619 4.19 0.00 39.07 4.26
2154 2239 2.103771 ACTTCTGAGCAACTCTGAGCAA 59.896 45.455 4.19 0.00 39.07 3.91
2155 2240 2.916702 TCTGAGCAACTCTGAGCAAA 57.083 45.000 4.19 0.00 34.42 3.68
2156 2241 3.198409 TCTGAGCAACTCTGAGCAAAA 57.802 42.857 4.19 0.00 34.42 2.44
2157 2242 3.544684 TCTGAGCAACTCTGAGCAAAAA 58.455 40.909 4.19 0.00 34.42 1.94
2158 2243 4.139786 TCTGAGCAACTCTGAGCAAAAAT 58.860 39.130 4.19 0.00 34.42 1.82
2159 2244 5.308014 TCTGAGCAACTCTGAGCAAAAATA 58.692 37.500 4.19 0.00 34.42 1.40
2160 2245 5.764686 TCTGAGCAACTCTGAGCAAAAATAA 59.235 36.000 4.19 0.00 34.42 1.40
2161 2246 6.262944 TCTGAGCAACTCTGAGCAAAAATAAA 59.737 34.615 4.19 0.00 34.42 1.40
2162 2247 6.804677 TGAGCAACTCTGAGCAAAAATAAAA 58.195 32.000 4.19 0.00 0.00 1.52
2163 2248 6.697019 TGAGCAACTCTGAGCAAAAATAAAAC 59.303 34.615 4.19 0.00 0.00 2.43
2164 2249 6.572519 AGCAACTCTGAGCAAAAATAAAACA 58.427 32.000 4.19 0.00 0.00 2.83
2165 2250 7.041107 AGCAACTCTGAGCAAAAATAAAACAA 58.959 30.769 4.19 0.00 0.00 2.83
2166 2251 7.548780 AGCAACTCTGAGCAAAAATAAAACAAA 59.451 29.630 4.19 0.00 0.00 2.83
2167 2252 8.174422 GCAACTCTGAGCAAAAATAAAACAAAA 58.826 29.630 4.19 0.00 0.00 2.44
2170 2255 9.598517 ACTCTGAGCAAAAATAAAACAAAATCA 57.401 25.926 4.19 0.00 0.00 2.57
2172 2257 8.550376 TCTGAGCAAAAATAAAACAAAATCAGC 58.450 29.630 0.00 0.00 31.60 4.26
2173 2258 7.638134 TGAGCAAAAATAAAACAAAATCAGCC 58.362 30.769 0.00 0.00 0.00 4.85
2174 2259 6.969366 AGCAAAAATAAAACAAAATCAGCCC 58.031 32.000 0.00 0.00 0.00 5.19
2175 2260 6.016360 AGCAAAAATAAAACAAAATCAGCCCC 60.016 34.615 0.00 0.00 0.00 5.80
2176 2261 6.676950 CAAAAATAAAACAAAATCAGCCCCC 58.323 36.000 0.00 0.00 0.00 5.40
2177 2262 5.574970 AAATAAAACAAAATCAGCCCCCA 57.425 34.783 0.00 0.00 0.00 4.96
2178 2263 5.574970 AATAAAACAAAATCAGCCCCCAA 57.425 34.783 0.00 0.00 0.00 4.12
2179 2264 2.928801 AAACAAAATCAGCCCCCAAC 57.071 45.000 0.00 0.00 0.00 3.77
2180 2265 1.799933 AACAAAATCAGCCCCCAACA 58.200 45.000 0.00 0.00 0.00 3.33
2181 2266 1.341080 ACAAAATCAGCCCCCAACAG 58.659 50.000 0.00 0.00 0.00 3.16
2182 2267 1.341080 CAAAATCAGCCCCCAACAGT 58.659 50.000 0.00 0.00 0.00 3.55
2183 2268 1.001181 CAAAATCAGCCCCCAACAGTG 59.999 52.381 0.00 0.00 0.00 3.66
2184 2269 1.187567 AAATCAGCCCCCAACAGTGC 61.188 55.000 0.00 0.00 0.00 4.40
2185 2270 2.370459 AATCAGCCCCCAACAGTGCA 62.370 55.000 0.00 0.00 0.00 4.57
2186 2271 2.159101 ATCAGCCCCCAACAGTGCAT 62.159 55.000 0.00 0.00 0.00 3.96
2187 2272 2.283388 AGCCCCCAACAGTGCATG 60.283 61.111 0.00 0.00 0.00 4.06
2188 2273 2.283101 GCCCCCAACAGTGCATGA 60.283 61.111 0.00 0.00 0.00 3.07
2189 2274 1.907807 GCCCCCAACAGTGCATGAA 60.908 57.895 0.00 0.00 0.00 2.57
2190 2275 1.966762 CCCCCAACAGTGCATGAAC 59.033 57.895 0.00 0.00 0.00 3.18
2191 2276 0.827089 CCCCCAACAGTGCATGAACA 60.827 55.000 6.60 0.00 0.00 3.18
2192 2277 1.039068 CCCCAACAGTGCATGAACAA 58.961 50.000 6.60 0.00 0.00 2.83
2193 2278 1.619827 CCCCAACAGTGCATGAACAAT 59.380 47.619 6.60 0.00 0.00 2.71
2194 2279 2.824936 CCCCAACAGTGCATGAACAATA 59.175 45.455 6.60 0.00 0.00 1.90
2195 2280 3.257873 CCCCAACAGTGCATGAACAATAA 59.742 43.478 6.60 0.00 0.00 1.40
2196 2281 4.262377 CCCCAACAGTGCATGAACAATAAA 60.262 41.667 6.60 0.00 0.00 1.40
2197 2282 5.481105 CCCAACAGTGCATGAACAATAAAT 58.519 37.500 6.60 0.00 0.00 1.40
2198 2283 5.933463 CCCAACAGTGCATGAACAATAAATT 59.067 36.000 6.60 0.00 0.00 1.82
2199 2284 6.427547 CCCAACAGTGCATGAACAATAAATTT 59.572 34.615 6.60 0.00 0.00 1.82
2200 2285 7.041235 CCCAACAGTGCATGAACAATAAATTTT 60.041 33.333 6.60 0.00 0.00 1.82
2201 2286 8.344098 CCAACAGTGCATGAACAATAAATTTTT 58.656 29.630 6.60 0.00 0.00 1.94
2202 2287 9.372541 CAACAGTGCATGAACAATAAATTTTTC 57.627 29.630 6.60 0.00 0.00 2.29
2203 2288 8.086851 ACAGTGCATGAACAATAAATTTTTCC 57.913 30.769 6.60 0.00 0.00 3.13
2204 2289 7.714377 ACAGTGCATGAACAATAAATTTTTCCA 59.286 29.630 6.60 0.00 0.00 3.53
2205 2290 8.723311 CAGTGCATGAACAATAAATTTTTCCAT 58.277 29.630 6.60 0.00 0.00 3.41
2206 2291 9.941325 AGTGCATGAACAATAAATTTTTCCATA 57.059 25.926 6.60 0.00 0.00 2.74
2241 2326 4.815533 TTTCTAAGAGCTGCTCAGATGT 57.184 40.909 29.49 7.47 32.06 3.06
2242 2327 4.383850 TTCTAAGAGCTGCTCAGATGTC 57.616 45.455 29.49 3.53 32.06 3.06
2243 2328 2.357323 TCTAAGAGCTGCTCAGATGTCG 59.643 50.000 29.49 11.44 32.06 4.35
2244 2329 0.459934 AAGAGCTGCTCAGATGTCGC 60.460 55.000 29.49 1.72 32.06 5.19
2245 2330 1.153686 GAGCTGCTCAGATGTCGCA 60.154 57.895 24.02 0.00 0.00 5.10
2246 2331 0.738762 GAGCTGCTCAGATGTCGCAA 60.739 55.000 24.02 0.00 32.66 4.85
2247 2332 0.107800 AGCTGCTCAGATGTCGCAAT 60.108 50.000 0.00 0.00 32.66 3.56
2248 2333 0.027716 GCTGCTCAGATGTCGCAATG 59.972 55.000 0.29 0.00 32.66 2.82
2249 2334 1.648504 CTGCTCAGATGTCGCAATGA 58.351 50.000 0.00 0.00 32.66 2.57
2250 2335 1.593469 CTGCTCAGATGTCGCAATGAG 59.407 52.381 14.98 14.98 41.68 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 1.402787 ACTGTGAAAAACCTGCCAGG 58.597 50.000 9.83 9.83 42.49 4.45
21 22 3.971245 AAAACTGTGAAAAACCTGCCA 57.029 38.095 0.00 0.00 0.00 4.92
27 28 7.969314 TGGAAGCAAATAAAACTGTGAAAAAC 58.031 30.769 0.00 0.00 0.00 2.43
31 32 7.440856 GGATTTGGAAGCAAATAAAACTGTGAA 59.559 33.333 0.00 0.00 35.18 3.18
35 36 7.148373 CCATGGATTTGGAAGCAAATAAAACTG 60.148 37.037 5.56 0.00 39.25 3.16
40 41 5.721000 AGACCATGGATTTGGAAGCAAATAA 59.279 36.000 21.47 0.00 39.25 1.40
41 42 5.271598 AGACCATGGATTTGGAAGCAAATA 58.728 37.500 21.47 0.00 39.25 1.40
66 67 2.808206 GGGGAGGTGCTATGTCGGG 61.808 68.421 0.00 0.00 0.00 5.14
82 83 6.037786 TGACTAGAGTGATAAAACAGTGGG 57.962 41.667 0.00 0.00 0.00 4.61
93 94 8.648693 TCATCAAATGATCATGACTAGAGTGAT 58.351 33.333 9.46 2.87 35.42 3.06
102 103 4.518211 GGAGGGTCATCAAATGATCATGAC 59.482 45.833 9.46 12.95 42.22 3.06
103 104 4.446745 GGGAGGGTCATCAAATGATCATGA 60.447 45.833 9.46 5.11 42.22 3.07
109 111 1.846439 GAGGGGAGGGTCATCAAATGA 59.154 52.381 0.00 0.00 36.84 2.57
164 166 4.178540 GACATTGCGGTGTTAGCTACTTA 58.821 43.478 0.00 0.00 35.28 2.24
166 168 2.618053 GACATTGCGGTGTTAGCTACT 58.382 47.619 0.00 0.00 35.28 2.57
167 169 1.664151 GGACATTGCGGTGTTAGCTAC 59.336 52.381 0.00 0.00 35.28 3.58
169 171 0.676782 GGGACATTGCGGTGTTAGCT 60.677 55.000 0.00 0.00 35.28 3.32
170 172 0.958382 TGGGACATTGCGGTGTTAGC 60.958 55.000 0.00 0.00 31.16 3.09
185 187 5.822132 ACAAATTGAATTTCCACATGGGA 57.178 34.783 0.00 0.00 46.61 4.37
186 188 9.664332 TTATAACAAATTGAATTTCCACATGGG 57.336 29.630 0.00 0.00 35.41 4.00
230 232 9.995957 CAGAGTCGAATATATGATTACCACTAG 57.004 37.037 0.00 0.00 0.00 2.57
244 249 4.819105 TGGTTGTTCCAGAGTCGAATAT 57.181 40.909 0.00 0.00 41.93 1.28
255 260 4.384098 CCAGCTGATATAGTGGTTGTTCCA 60.384 45.833 17.39 0.00 45.01 3.53
257 262 4.130118 CCCAGCTGATATAGTGGTTGTTC 58.870 47.826 17.39 0.00 0.00 3.18
302 308 6.486993 GTGAAAACCCTGATAATCTATGGGAC 59.513 42.308 3.13 0.00 40.23 4.46
306 312 9.793252 CAAAAGTGAAAACCCTGATAATCTATG 57.207 33.333 0.00 0.00 0.00 2.23
334 383 9.674068 GAGAAGAATAAGAAACCTTGATAACCT 57.326 33.333 0.00 0.00 0.00 3.50
352 401 3.372458 GGGCAAGGAAGATGGAGAAGAAT 60.372 47.826 0.00 0.00 0.00 2.40
395 444 1.141645 GTTCACGGAATGCGTACACA 58.858 50.000 0.00 0.00 0.00 3.72
415 464 5.801380 TGGTTCTTCTTGTAGGGTATGTTC 58.199 41.667 0.00 0.00 0.00 3.18
420 469 7.989947 ATCTTATGGTTCTTCTTGTAGGGTA 57.010 36.000 0.00 0.00 0.00 3.69
446 498 5.834239 ACACGAACGTATCTAACAAAAGG 57.166 39.130 0.00 0.00 0.00 3.11
450 502 5.627499 AGGTACACGAACGTATCTAACAA 57.373 39.130 0.00 0.00 30.88 2.83
489 541 1.066502 GGTCTCTCACCAGAGCTTTCC 60.067 57.143 0.00 0.00 45.46 3.13
516 568 3.341823 AGCTTCATCTTCATTGCTCGTT 58.658 40.909 0.00 0.00 0.00 3.85
544 596 1.073763 TCCCTTGTTATGCTGCACAGT 59.926 47.619 3.57 0.00 0.00 3.55
582 636 5.576384 CGCATGCATTTACCTTACAATTGTT 59.424 36.000 17.78 0.51 0.00 2.83
614 668 1.002274 ACCAGCACCCCTAGAGGAG 59.998 63.158 0.00 0.00 38.24 3.69
637 691 2.552093 TCTAGGCCTCTGCTTTACCT 57.448 50.000 9.68 0.00 37.74 3.08
638 692 2.743510 GCTTCTAGGCCTCTGCTTTACC 60.744 54.545 9.68 0.00 37.74 2.85
676 730 4.505922 GCTAGCTAATTATATGAGCGCAGG 59.494 45.833 11.47 0.00 41.23 4.85
677 731 4.205996 CGCTAGCTAATTATATGAGCGCAG 59.794 45.833 11.47 0.00 43.86 5.18
704 760 2.224719 GGGGTTGATGATGAGATGAGGG 60.225 54.545 0.00 0.00 0.00 4.30
728 784 0.179059 ATTCGCATCACCGGTGCATA 60.179 50.000 30.25 13.75 42.62 3.14
729 785 0.179059 TATTCGCATCACCGGTGCAT 60.179 50.000 30.25 19.95 42.62 3.96
733 789 3.367087 GCTATAGTATTCGCATCACCGGT 60.367 47.826 0.00 0.00 0.00 5.28
760 816 3.411446 GATATTTGGACGGCCATGATCA 58.589 45.455 13.08 0.00 45.46 2.92
765 821 0.889186 GGCGATATTTGGACGGCCAT 60.889 55.000 13.08 0.00 45.46 4.40
766 822 1.525077 GGCGATATTTGGACGGCCA 60.525 57.895 5.41 5.41 44.46 5.36
778 834 0.803117 GATCGAGATGTCCGGCGATA 59.197 55.000 9.30 0.00 42.78 2.92
783 839 1.606480 CCATTGGATCGAGATGTCCGG 60.606 57.143 0.00 0.00 37.32 5.14
801 857 1.757118 GGAAGAGGATCGATCACACCA 59.243 52.381 25.93 0.00 42.67 4.17
806 862 4.666412 ATAGGAGGAAGAGGATCGATCA 57.334 45.455 25.93 2.00 42.67 2.92
936 992 5.130350 AGAGGAACTTGCTAGCTAGTAGAG 58.870 45.833 28.11 17.47 41.55 2.43
938 994 5.845391 AAGAGGAACTTGCTAGCTAGTAG 57.155 43.478 28.11 19.53 41.55 2.57
939 995 6.424883 AGTAAGAGGAACTTGCTAGCTAGTA 58.575 40.000 28.11 15.16 46.58 1.82
940 996 5.265989 AGTAAGAGGAACTTGCTAGCTAGT 58.734 41.667 23.63 23.63 46.58 2.57
946 1002 4.350245 TGCCTAGTAAGAGGAACTTGCTA 58.650 43.478 0.00 0.00 46.58 3.49
955 1011 1.484240 AGCTTGCTGCCTAGTAAGAGG 59.516 52.381 8.92 0.00 45.97 3.69
960 1016 4.253685 CAACTTTAGCTTGCTGCCTAGTA 58.746 43.478 5.26 0.00 44.23 1.82
979 1035 1.207329 CCTAGCTACCTCCACACCAAC 59.793 57.143 0.00 0.00 0.00 3.77
987 1043 1.551329 CCTCCCATCCTAGCTACCTCC 60.551 61.905 0.00 0.00 0.00 4.30
991 1047 2.252714 CTTCCCTCCCATCCTAGCTAC 58.747 57.143 0.00 0.00 0.00 3.58
995 1051 1.333177 CGACTTCCCTCCCATCCTAG 58.667 60.000 0.00 0.00 0.00 3.02
1038 1094 1.205893 GACCTCGACAGGAAGCTGAAT 59.794 52.381 0.00 0.00 43.65 2.57
1195 1257 3.251571 GGTGGAAGTCGTTGATGTAGTC 58.748 50.000 0.00 0.00 0.00 2.59
1242 1304 3.384789 TGTTGCATGCTACCTAGGAGTAG 59.615 47.826 25.88 8.98 42.25 2.57
1243 1305 3.132289 GTGTTGCATGCTACCTAGGAGTA 59.868 47.826 25.88 8.58 0.00 2.59
1244 1306 2.093447 GTGTTGCATGCTACCTAGGAGT 60.093 50.000 25.88 0.00 0.00 3.85
1245 1307 2.169352 AGTGTTGCATGCTACCTAGGAG 59.831 50.000 25.88 9.76 0.00 3.69
1246 1308 2.168521 GAGTGTTGCATGCTACCTAGGA 59.831 50.000 25.88 7.40 0.00 2.94
1247 1309 2.555199 GAGTGTTGCATGCTACCTAGG 58.445 52.381 25.88 7.41 0.00 3.02
1432 1512 0.107993 ATCTGTGACGCATCCCTGTG 60.108 55.000 0.00 0.00 38.87 3.66
1515 1599 7.898309 GCTGAAGTACTAATCAAACATAACACG 59.102 37.037 0.00 0.00 0.00 4.49
1521 1605 5.730550 TCCGCTGAAGTACTAATCAAACAT 58.269 37.500 0.00 0.00 0.00 2.71
1530 1614 3.887621 AGCAAATCCGCTGAAGTACTA 57.112 42.857 0.00 0.00 41.85 1.82
1553 1637 0.912486 ACTCCCCATTGTGGCTAGTC 59.088 55.000 0.00 0.00 35.79 2.59
1554 1638 2.263895 TACTCCCCATTGTGGCTAGT 57.736 50.000 0.00 6.67 35.79 2.57
1555 1639 3.864789 ATTACTCCCCATTGTGGCTAG 57.135 47.619 0.00 0.00 35.79 3.42
1556 1640 4.601406 AAATTACTCCCCATTGTGGCTA 57.399 40.909 0.00 0.00 35.79 3.93
1557 1641 3.473113 AAATTACTCCCCATTGTGGCT 57.527 42.857 0.00 0.00 35.79 4.75
1558 1642 4.338400 GTCTAAATTACTCCCCATTGTGGC 59.662 45.833 0.00 0.00 35.79 5.01
1559 1643 5.755849 AGTCTAAATTACTCCCCATTGTGG 58.244 41.667 0.00 0.00 37.25 4.17
1560 1644 7.565680 ACTAGTCTAAATTACTCCCCATTGTG 58.434 38.462 0.00 0.00 0.00 3.33
1561 1645 7.750947 ACTAGTCTAAATTACTCCCCATTGT 57.249 36.000 0.00 0.00 0.00 2.71
1606 1690 9.233649 GCCACTATAGAGATAGTAACATACACT 57.766 37.037 6.78 0.00 45.42 3.55
1607 1691 9.011095 TGCCACTATAGAGATAGTAACATACAC 57.989 37.037 6.78 0.00 45.42 2.90
1608 1692 9.582648 TTGCCACTATAGAGATAGTAACATACA 57.417 33.333 6.78 0.00 45.42 2.29
1610 1694 9.809395 ACTTGCCACTATAGAGATAGTAACATA 57.191 33.333 6.78 0.00 45.42 2.29
1611 1695 8.713708 ACTTGCCACTATAGAGATAGTAACAT 57.286 34.615 6.78 0.00 45.42 2.71
1612 1696 9.636789 TTACTTGCCACTATAGAGATAGTAACA 57.363 33.333 6.78 0.00 45.42 2.41
1613 1697 9.896263 GTTACTTGCCACTATAGAGATAGTAAC 57.104 37.037 19.82 19.82 45.42 2.50
1614 1698 9.636789 TGTTACTTGCCACTATAGAGATAGTAA 57.363 33.333 6.78 9.77 45.42 2.24
1615 1699 9.809395 ATGTTACTTGCCACTATAGAGATAGTA 57.191 33.333 6.78 4.71 45.42 1.82
1617 1701 8.580720 ACATGTTACTTGCCACTATAGAGATAG 58.419 37.037 6.78 0.00 40.92 2.08
1618 1702 8.360390 CACATGTTACTTGCCACTATAGAGATA 58.640 37.037 6.78 0.00 0.00 1.98
1619 1703 7.147655 ACACATGTTACTTGCCACTATAGAGAT 60.148 37.037 6.78 0.00 0.00 2.75
1620 1704 6.154534 ACACATGTTACTTGCCACTATAGAGA 59.845 38.462 6.78 0.00 0.00 3.10
1621 1705 6.256539 CACACATGTTACTTGCCACTATAGAG 59.743 42.308 6.78 0.00 0.00 2.43
1622 1706 6.106003 CACACATGTTACTTGCCACTATAGA 58.894 40.000 6.78 0.00 0.00 1.98
1623 1707 5.874810 ACACACATGTTACTTGCCACTATAG 59.125 40.000 0.00 0.00 34.46 1.31
1624 1708 5.641636 CACACACATGTTACTTGCCACTATA 59.358 40.000 0.00 0.00 36.72 1.31
1625 1709 4.455533 CACACACATGTTACTTGCCACTAT 59.544 41.667 0.00 0.00 36.72 2.12
1626 1710 3.812609 CACACACATGTTACTTGCCACTA 59.187 43.478 0.00 0.00 36.72 2.74
1627 1711 2.618241 CACACACATGTTACTTGCCACT 59.382 45.455 0.00 0.00 36.72 4.00
1628 1712 2.616376 TCACACACATGTTACTTGCCAC 59.384 45.455 0.00 0.00 36.72 5.01
1629 1713 2.924421 TCACACACATGTTACTTGCCA 58.076 42.857 0.00 0.00 36.72 4.92
1630 1714 5.353956 TGATATCACACACATGTTACTTGCC 59.646 40.000 0.00 0.00 36.72 4.52
1631 1715 6.421377 TGATATCACACACATGTTACTTGC 57.579 37.500 0.00 0.00 36.72 4.01
1632 1716 9.097257 TGTATGATATCACACACATGTTACTTG 57.903 33.333 12.79 0.00 36.72 3.16
1633 1717 9.665719 TTGTATGATATCACACACATGTTACTT 57.334 29.630 16.28 0.00 36.72 2.24
1634 1718 9.098355 GTTGTATGATATCACACACATGTTACT 57.902 33.333 16.28 0.00 36.72 2.24
1635 1719 8.878769 TGTTGTATGATATCACACACATGTTAC 58.121 33.333 16.28 11.09 36.72 2.50
1636 1720 8.878769 GTGTTGTATGATATCACACACATGTTA 58.121 33.333 16.28 0.00 36.72 2.41
1637 1721 7.607607 AGTGTTGTATGATATCACACACATGTT 59.392 33.333 25.93 12.98 36.72 2.71
1638 1722 7.105588 AGTGTTGTATGATATCACACACATGT 58.894 34.615 25.93 14.43 40.80 3.21
1639 1723 7.543947 AGTGTTGTATGATATCACACACATG 57.456 36.000 25.93 0.00 32.38 3.21
1640 1724 7.823799 TGAAGTGTTGTATGATATCACACACAT 59.176 33.333 25.93 19.91 32.38 3.21
1641 1725 7.158021 TGAAGTGTTGTATGATATCACACACA 58.842 34.615 25.93 19.88 32.38 3.72
1642 1726 7.595311 TGAAGTGTTGTATGATATCACACAC 57.405 36.000 16.28 19.31 32.38 3.82
1643 1727 8.791327 AATGAAGTGTTGTATGATATCACACA 57.209 30.769 12.79 12.79 30.47 3.72
1656 1740 9.344772 TGTACAACCTAATAAATGAAGTGTTGT 57.655 29.630 9.30 9.30 44.87 3.32
1657 1741 9.607285 GTGTACAACCTAATAAATGAAGTGTTG 57.393 33.333 0.00 0.00 38.18 3.33
1658 1742 9.569122 AGTGTACAACCTAATAAATGAAGTGTT 57.431 29.630 0.00 0.00 0.00 3.32
1659 1743 9.216117 GAGTGTACAACCTAATAAATGAAGTGT 57.784 33.333 0.00 0.00 0.00 3.55
1660 1744 9.214957 TGAGTGTACAACCTAATAAATGAAGTG 57.785 33.333 0.00 0.00 0.00 3.16
1661 1745 9.959721 ATGAGTGTACAACCTAATAAATGAAGT 57.040 29.630 0.00 0.00 0.00 3.01
1666 1750 9.959721 ACAAGATGAGTGTACAACCTAATAAAT 57.040 29.630 0.00 0.00 0.00 1.40
1667 1751 9.431887 GACAAGATGAGTGTACAACCTAATAAA 57.568 33.333 0.00 0.00 0.00 1.40
1668 1752 8.812972 AGACAAGATGAGTGTACAACCTAATAA 58.187 33.333 0.00 0.00 0.00 1.40
1669 1753 8.362464 AGACAAGATGAGTGTACAACCTAATA 57.638 34.615 0.00 0.00 0.00 0.98
1670 1754 7.246171 AGACAAGATGAGTGTACAACCTAAT 57.754 36.000 0.00 0.00 0.00 1.73
1671 1755 6.665992 AGACAAGATGAGTGTACAACCTAA 57.334 37.500 0.00 0.00 0.00 2.69
1672 1756 6.455647 CAAGACAAGATGAGTGTACAACCTA 58.544 40.000 0.00 0.00 0.00 3.08
1673 1757 5.300752 CAAGACAAGATGAGTGTACAACCT 58.699 41.667 0.00 0.00 0.00 3.50
1674 1758 4.452455 CCAAGACAAGATGAGTGTACAACC 59.548 45.833 0.00 0.00 0.00 3.77
1675 1759 5.057149 ACCAAGACAAGATGAGTGTACAAC 58.943 41.667 0.00 0.00 0.00 3.32
1676 1760 5.290493 ACCAAGACAAGATGAGTGTACAA 57.710 39.130 0.00 0.00 0.00 2.41
1677 1761 4.955811 ACCAAGACAAGATGAGTGTACA 57.044 40.909 0.00 0.00 0.00 2.90
1678 1762 6.311445 CACATACCAAGACAAGATGAGTGTAC 59.689 42.308 0.00 0.00 0.00 2.90
1679 1763 6.014584 ACACATACCAAGACAAGATGAGTGTA 60.015 38.462 0.00 0.00 34.03 2.90
1680 1764 5.221722 ACACATACCAAGACAAGATGAGTGT 60.222 40.000 0.00 0.00 0.00 3.55
1681 1765 5.121298 CACACATACCAAGACAAGATGAGTG 59.879 44.000 0.00 0.00 34.41 3.51
1682 1766 5.012046 TCACACATACCAAGACAAGATGAGT 59.988 40.000 0.00 0.00 0.00 3.41
1683 1767 5.482006 TCACACATACCAAGACAAGATGAG 58.518 41.667 0.00 0.00 0.00 2.90
1684 1768 5.482163 TCACACATACCAAGACAAGATGA 57.518 39.130 0.00 0.00 0.00 2.92
1685 1769 5.645067 ACATCACACATACCAAGACAAGATG 59.355 40.000 0.00 0.00 36.24 2.90
1686 1770 5.809001 ACATCACACATACCAAGACAAGAT 58.191 37.500 0.00 0.00 0.00 2.40
1687 1771 5.227569 ACATCACACATACCAAGACAAGA 57.772 39.130 0.00 0.00 0.00 3.02
1688 1772 5.947228 AACATCACACATACCAAGACAAG 57.053 39.130 0.00 0.00 0.00 3.16
1689 1773 6.995686 ACTTAACATCACACATACCAAGACAA 59.004 34.615 0.00 0.00 0.00 3.18
1690 1774 6.530120 ACTTAACATCACACATACCAAGACA 58.470 36.000 0.00 0.00 0.00 3.41
1691 1775 8.440833 GTTACTTAACATCACACATACCAAGAC 58.559 37.037 0.00 0.00 36.25 3.01
1692 1776 8.372459 AGTTACTTAACATCACACATACCAAGA 58.628 33.333 2.10 0.00 38.62 3.02
1693 1777 8.547967 AGTTACTTAACATCACACATACCAAG 57.452 34.615 2.10 0.00 38.62 3.61
1694 1778 9.647797 CTAGTTACTTAACATCACACATACCAA 57.352 33.333 0.00 0.00 38.62 3.67
1695 1779 7.762615 GCTAGTTACTTAACATCACACATACCA 59.237 37.037 0.00 0.00 38.62 3.25
1696 1780 7.980099 AGCTAGTTACTTAACATCACACATACC 59.020 37.037 0.00 0.00 38.62 2.73
1697 1781 8.928270 AGCTAGTTACTTAACATCACACATAC 57.072 34.615 0.00 0.00 38.62 2.39
1699 1783 9.534565 CATAGCTAGTTACTTAACATCACACAT 57.465 33.333 0.00 0.00 38.62 3.21
1700 1784 8.528643 ACATAGCTAGTTACTTAACATCACACA 58.471 33.333 0.00 0.00 38.62 3.72
1701 1785 8.928270 ACATAGCTAGTTACTTAACATCACAC 57.072 34.615 0.00 0.00 38.62 3.82
1710 1794 9.309516 GCATGTGTTAACATAGCTAGTTACTTA 57.690 33.333 12.26 1.10 45.50 2.24
1711 1795 7.280205 GGCATGTGTTAACATAGCTAGTTACTT 59.720 37.037 21.28 0.90 45.50 2.24
1712 1796 6.761714 GGCATGTGTTAACATAGCTAGTTACT 59.238 38.462 21.28 0.00 45.50 2.24
1713 1797 6.761714 AGGCATGTGTTAACATAGCTAGTTAC 59.238 38.462 21.28 9.82 45.50 2.50
1714 1798 6.884832 AGGCATGTGTTAACATAGCTAGTTA 58.115 36.000 21.28 5.74 45.50 2.24
1715 1799 5.745227 AGGCATGTGTTAACATAGCTAGTT 58.255 37.500 21.28 6.69 45.50 2.24
1716 1800 5.129485 AGAGGCATGTGTTAACATAGCTAGT 59.871 40.000 21.28 11.69 45.50 2.57
1717 1801 5.605534 AGAGGCATGTGTTAACATAGCTAG 58.394 41.667 21.28 9.73 45.50 3.42
1718 1802 5.363868 AGAGAGGCATGTGTTAACATAGCTA 59.636 40.000 21.28 0.00 45.50 3.32
1719 1803 4.163078 AGAGAGGCATGTGTTAACATAGCT 59.837 41.667 21.28 12.30 45.50 3.32
1720 1804 4.446371 AGAGAGGCATGTGTTAACATAGC 58.554 43.478 12.26 15.04 45.50 2.97
1721 1805 6.820656 AGAAAGAGAGGCATGTGTTAACATAG 59.179 38.462 12.26 6.09 45.50 2.23
1722 1806 6.711277 AGAAAGAGAGGCATGTGTTAACATA 58.289 36.000 12.26 9.81 45.50 2.29
1724 1808 4.973168 AGAAAGAGAGGCATGTGTTAACA 58.027 39.130 3.59 3.59 41.58 2.41
1725 1809 5.470098 TGAAGAAAGAGAGGCATGTGTTAAC 59.530 40.000 0.00 0.00 0.00 2.01
1726 1810 5.620206 TGAAGAAAGAGAGGCATGTGTTAA 58.380 37.500 0.00 0.00 0.00 2.01
1727 1811 5.227569 TGAAGAAAGAGAGGCATGTGTTA 57.772 39.130 0.00 0.00 0.00 2.41
1728 1812 4.090761 TGAAGAAAGAGAGGCATGTGTT 57.909 40.909 0.00 0.00 0.00 3.32
1729 1813 3.777106 TGAAGAAAGAGAGGCATGTGT 57.223 42.857 0.00 0.00 0.00 3.72
1730 1814 5.879223 ACTAATGAAGAAAGAGAGGCATGTG 59.121 40.000 0.00 0.00 0.00 3.21
1731 1815 6.059787 ACTAATGAAGAAAGAGAGGCATGT 57.940 37.500 0.00 0.00 0.00 3.21
1732 1816 6.998968 AACTAATGAAGAAAGAGAGGCATG 57.001 37.500 0.00 0.00 0.00 4.06
1733 1817 7.856415 AGTAACTAATGAAGAAAGAGAGGCAT 58.144 34.615 0.00 0.00 0.00 4.40
1734 1818 7.246171 AGTAACTAATGAAGAAAGAGAGGCA 57.754 36.000 0.00 0.00 0.00 4.75
1735 1819 7.604545 ACAAGTAACTAATGAAGAAAGAGAGGC 59.395 37.037 0.00 0.00 0.00 4.70
1736 1820 9.145865 GACAAGTAACTAATGAAGAAAGAGAGG 57.854 37.037 0.00 0.00 0.00 3.69
1737 1821 9.698309 TGACAAGTAACTAATGAAGAAAGAGAG 57.302 33.333 0.00 0.00 0.00 3.20
1738 1822 9.477484 GTGACAAGTAACTAATGAAGAAAGAGA 57.523 33.333 0.00 0.00 0.00 3.10
1739 1823 9.261180 TGTGACAAGTAACTAATGAAGAAAGAG 57.739 33.333 0.00 0.00 0.00 2.85
1740 1824 9.778741 ATGTGACAAGTAACTAATGAAGAAAGA 57.221 29.630 0.00 0.00 0.00 2.52
1742 1826 9.554395 TGATGTGACAAGTAACTAATGAAGAAA 57.446 29.630 0.00 0.00 0.00 2.52
1743 1827 9.725019 ATGATGTGACAAGTAACTAATGAAGAA 57.275 29.630 0.00 0.00 0.00 2.52
1744 1828 9.371136 GATGATGTGACAAGTAACTAATGAAGA 57.629 33.333 0.00 0.00 0.00 2.87
1745 1829 9.376075 AGATGATGTGACAAGTAACTAATGAAG 57.624 33.333 0.00 0.00 0.00 3.02
1752 1836 8.454106 GCAAAATAGATGATGTGACAAGTAACT 58.546 33.333 0.00 0.00 0.00 2.24
1753 1837 7.698130 GGCAAAATAGATGATGTGACAAGTAAC 59.302 37.037 0.00 0.00 0.00 2.50
1754 1838 7.611467 AGGCAAAATAGATGATGTGACAAGTAA 59.389 33.333 0.00 0.00 0.00 2.24
1755 1839 7.066163 CAGGCAAAATAGATGATGTGACAAGTA 59.934 37.037 0.00 0.00 0.00 2.24
1756 1840 5.948162 AGGCAAAATAGATGATGTGACAAGT 59.052 36.000 0.00 0.00 0.00 3.16
1757 1841 6.094464 TCAGGCAAAATAGATGATGTGACAAG 59.906 38.462 0.00 0.00 0.00 3.16
1758 1842 5.945191 TCAGGCAAAATAGATGATGTGACAA 59.055 36.000 0.00 0.00 0.00 3.18
1759 1843 5.499313 TCAGGCAAAATAGATGATGTGACA 58.501 37.500 0.00 0.00 0.00 3.58
1760 1844 6.441093 TTCAGGCAAAATAGATGATGTGAC 57.559 37.500 0.00 0.00 0.00 3.67
1761 1845 7.041848 CGTATTCAGGCAAAATAGATGATGTGA 60.042 37.037 0.00 0.00 0.00 3.58
1762 1846 7.073883 CGTATTCAGGCAAAATAGATGATGTG 58.926 38.462 0.00 0.00 0.00 3.21
1763 1847 6.767902 ACGTATTCAGGCAAAATAGATGATGT 59.232 34.615 0.00 0.00 0.00 3.06
1764 1848 7.073883 CACGTATTCAGGCAAAATAGATGATG 58.926 38.462 0.00 0.00 0.00 3.07
1765 1849 6.767902 ACACGTATTCAGGCAAAATAGATGAT 59.232 34.615 0.00 0.00 0.00 2.45
1766 1850 6.037062 CACACGTATTCAGGCAAAATAGATGA 59.963 38.462 0.00 0.00 0.00 2.92
1767 1851 6.037062 TCACACGTATTCAGGCAAAATAGATG 59.963 38.462 0.00 0.00 0.00 2.90
1768 1852 6.112734 TCACACGTATTCAGGCAAAATAGAT 58.887 36.000 0.00 0.00 0.00 1.98
1769 1853 5.483811 TCACACGTATTCAGGCAAAATAGA 58.516 37.500 0.00 0.00 0.00 1.98
1770 1854 5.794687 TCACACGTATTCAGGCAAAATAG 57.205 39.130 0.00 0.00 0.00 1.73
1771 1855 5.645929 ACATCACACGTATTCAGGCAAAATA 59.354 36.000 0.00 0.00 0.00 1.40
1772 1856 4.458989 ACATCACACGTATTCAGGCAAAAT 59.541 37.500 0.00 0.00 0.00 1.82
1773 1857 3.818210 ACATCACACGTATTCAGGCAAAA 59.182 39.130 0.00 0.00 0.00 2.44
1774 1858 3.407698 ACATCACACGTATTCAGGCAAA 58.592 40.909 0.00 0.00 0.00 3.68
1775 1859 3.052455 ACATCACACGTATTCAGGCAA 57.948 42.857 0.00 0.00 0.00 4.52
1776 1860 2.760634 ACATCACACGTATTCAGGCA 57.239 45.000 0.00 0.00 0.00 4.75
1777 1861 3.308866 GGTAACATCACACGTATTCAGGC 59.691 47.826 0.00 0.00 0.00 4.85
1778 1862 4.500127 TGGTAACATCACACGTATTCAGG 58.500 43.478 0.00 0.00 46.17 3.86
1794 1878 8.181573 CACAATGGAAGTAACATATGTGGTAAC 58.818 37.037 9.63 6.01 35.78 2.50
1795 1879 7.338196 CCACAATGGAAGTAACATATGTGGTAA 59.662 37.037 9.63 0.00 43.26 2.85
1796 1880 6.826231 CCACAATGGAAGTAACATATGTGGTA 59.174 38.462 9.63 0.00 43.26 3.25
1797 1881 5.652014 CCACAATGGAAGTAACATATGTGGT 59.348 40.000 9.63 0.00 43.26 4.16
1798 1882 5.067674 CCCACAATGGAAGTAACATATGTGG 59.932 44.000 9.63 20.37 45.04 4.17
1799 1883 5.652014 ACCCACAATGGAAGTAACATATGTG 59.348 40.000 9.63 0.00 40.96 3.21
1800 1884 5.826643 ACCCACAATGGAAGTAACATATGT 58.173 37.500 1.41 1.41 40.96 2.29
1801 1885 7.054124 ACTACCCACAATGGAAGTAACATATG 58.946 38.462 0.00 0.00 40.96 1.78
1802 1886 7.127339 AGACTACCCACAATGGAAGTAACATAT 59.873 37.037 0.00 0.00 40.96 1.78
1803 1887 6.442564 AGACTACCCACAATGGAAGTAACATA 59.557 38.462 0.00 0.00 40.96 2.29
1804 1888 5.250774 AGACTACCCACAATGGAAGTAACAT 59.749 40.000 0.00 0.00 40.96 2.71
1805 1889 4.595781 AGACTACCCACAATGGAAGTAACA 59.404 41.667 0.00 0.00 40.96 2.41
1806 1890 5.161943 AGACTACCCACAATGGAAGTAAC 57.838 43.478 0.00 0.00 40.96 2.50
1807 1891 6.499350 ACTTAGACTACCCACAATGGAAGTAA 59.501 38.462 0.00 0.00 40.96 2.24
1808 1892 6.021030 ACTTAGACTACCCACAATGGAAGTA 58.979 40.000 0.00 0.00 40.96 2.24
1809 1893 4.844655 ACTTAGACTACCCACAATGGAAGT 59.155 41.667 0.00 0.00 40.96 3.01
1810 1894 5.046591 TGACTTAGACTACCCACAATGGAAG 60.047 44.000 0.00 0.00 40.96 3.46
1811 1895 4.841813 TGACTTAGACTACCCACAATGGAA 59.158 41.667 0.00 0.00 40.96 3.53
1812 1896 4.222145 GTGACTTAGACTACCCACAATGGA 59.778 45.833 0.00 0.00 40.96 3.41
1813 1897 4.020573 TGTGACTTAGACTACCCACAATGG 60.021 45.833 7.80 0.00 37.25 3.16
1814 1898 4.929808 GTGTGACTTAGACTACCCACAATG 59.070 45.833 10.55 0.00 36.47 2.82
1815 1899 4.321750 CGTGTGACTTAGACTACCCACAAT 60.322 45.833 10.55 0.00 36.47 2.71
1816 1900 3.005050 CGTGTGACTTAGACTACCCACAA 59.995 47.826 10.55 0.00 36.47 3.33
1817 1901 2.555325 CGTGTGACTTAGACTACCCACA 59.445 50.000 6.66 6.66 32.87 4.17
1818 1902 2.670509 GCGTGTGACTTAGACTACCCAC 60.671 54.545 0.00 0.00 0.00 4.61
1819 1903 1.542915 GCGTGTGACTTAGACTACCCA 59.457 52.381 0.00 0.00 0.00 4.51
1820 1904 1.542915 TGCGTGTGACTTAGACTACCC 59.457 52.381 0.00 0.00 0.00 3.69
1821 1905 2.985139 GTTGCGTGTGACTTAGACTACC 59.015 50.000 0.00 0.00 0.00 3.18
1822 1906 3.669122 CAGTTGCGTGTGACTTAGACTAC 59.331 47.826 0.00 0.00 0.00 2.73
1823 1907 3.566742 TCAGTTGCGTGTGACTTAGACTA 59.433 43.478 0.00 0.00 0.00 2.59
1824 1908 2.361119 TCAGTTGCGTGTGACTTAGACT 59.639 45.455 0.00 0.00 0.00 3.24
1825 1909 2.739292 TCAGTTGCGTGTGACTTAGAC 58.261 47.619 0.00 0.00 0.00 2.59
1826 1910 3.660501 ATCAGTTGCGTGTGACTTAGA 57.339 42.857 0.00 0.00 0.00 2.10
1827 1911 6.408858 AATAATCAGTTGCGTGTGACTTAG 57.591 37.500 0.00 0.00 0.00 2.18
1828 1912 7.094631 AGTAATAATCAGTTGCGTGTGACTTA 58.905 34.615 0.00 0.00 0.00 2.24
1829 1913 5.932303 AGTAATAATCAGTTGCGTGTGACTT 59.068 36.000 0.00 0.00 0.00 3.01
1830 1914 5.479306 AGTAATAATCAGTTGCGTGTGACT 58.521 37.500 0.00 0.00 0.00 3.41
1831 1915 5.779806 AGTAATAATCAGTTGCGTGTGAC 57.220 39.130 0.00 0.00 0.00 3.67
1837 1921 4.342772 GGCACAAGTAATAATCAGTTGCG 58.657 43.478 0.00 0.00 30.84 4.85
1850 1934 3.330701 AGAGAAATTGAGGGGCACAAGTA 59.669 43.478 0.00 0.00 0.00 2.24
1851 1935 2.108952 AGAGAAATTGAGGGGCACAAGT 59.891 45.455 0.00 0.00 0.00 3.16
1852 1936 2.490903 CAGAGAAATTGAGGGGCACAAG 59.509 50.000 0.00 0.00 0.00 3.16
1855 1939 0.813821 GCAGAGAAATTGAGGGGCAC 59.186 55.000 0.00 0.00 0.00 5.01
1859 1943 2.426024 CACCATGCAGAGAAATTGAGGG 59.574 50.000 0.00 0.00 0.00 4.30
1860 1944 3.349927 TCACCATGCAGAGAAATTGAGG 58.650 45.455 0.00 0.00 0.00 3.86
1864 1948 2.799017 TGCTCACCATGCAGAGAAATT 58.201 42.857 14.60 0.00 35.31 1.82
1872 1956 3.060000 GCTGCTGCTCACCATGCA 61.060 61.111 8.53 0.00 38.81 3.96
1875 1959 2.435586 GACGCTGCTGCTCACCAT 60.436 61.111 14.03 0.00 36.97 3.55
1876 1960 4.687215 GGACGCTGCTGCTCACCA 62.687 66.667 14.03 0.00 36.97 4.17
1944 2028 4.473520 CCGTGGCCAGCTGGGTAG 62.474 72.222 33.46 9.20 39.65 3.18
1982 2066 1.191535 CTGAACCCGACATACCTCCA 58.808 55.000 0.00 0.00 0.00 3.86
1989 2073 1.605058 CTCCGACCTGAACCCGACAT 61.605 60.000 0.00 0.00 0.00 3.06
1992 2076 3.379445 GCTCCGACCTGAACCCGA 61.379 66.667 0.00 0.00 0.00 5.14
2072 2157 1.153289 CGAGCCCTGACTTCCCATG 60.153 63.158 0.00 0.00 0.00 3.66
2073 2158 2.370445 CCGAGCCCTGACTTCCCAT 61.370 63.158 0.00 0.00 0.00 4.00
2090 2175 0.109532 GCCCTGCCTTTCTCCTATCC 59.890 60.000 0.00 0.00 0.00 2.59
2091 2176 0.839946 TGCCCTGCCTTTCTCCTATC 59.160 55.000 0.00 0.00 0.00 2.08
2098 2183 1.662044 CAGTTGTGCCCTGCCTTTC 59.338 57.895 0.00 0.00 0.00 2.62
2099 2184 1.833934 CCAGTTGTGCCCTGCCTTT 60.834 57.895 0.00 0.00 0.00 3.11
2100 2185 2.203538 CCAGTTGTGCCCTGCCTT 60.204 61.111 0.00 0.00 0.00 4.35
2101 2186 3.177884 TCCAGTTGTGCCCTGCCT 61.178 61.111 0.00 0.00 0.00 4.75
2102 2187 2.674380 CTCCAGTTGTGCCCTGCC 60.674 66.667 0.00 0.00 0.00 4.85
2103 2188 2.674380 CCTCCAGTTGTGCCCTGC 60.674 66.667 0.00 0.00 0.00 4.85
2104 2189 0.607489 CTTCCTCCAGTTGTGCCCTG 60.607 60.000 0.00 0.00 0.00 4.45
2105 2190 0.768221 TCTTCCTCCAGTTGTGCCCT 60.768 55.000 0.00 0.00 0.00 5.19
2106 2191 0.322008 CTCTTCCTCCAGTTGTGCCC 60.322 60.000 0.00 0.00 0.00 5.36
2107 2192 0.398318 ACTCTTCCTCCAGTTGTGCC 59.602 55.000 0.00 0.00 0.00 5.01
2108 2193 1.070758 TCACTCTTCCTCCAGTTGTGC 59.929 52.381 0.00 0.00 0.00 4.57
2109 2194 3.134458 GTTCACTCTTCCTCCAGTTGTG 58.866 50.000 0.00 0.00 0.00 3.33
2110 2195 2.224066 CGTTCACTCTTCCTCCAGTTGT 60.224 50.000 0.00 0.00 0.00 3.32
2111 2196 2.408050 CGTTCACTCTTCCTCCAGTTG 58.592 52.381 0.00 0.00 0.00 3.16
2112 2197 1.344763 CCGTTCACTCTTCCTCCAGTT 59.655 52.381 0.00 0.00 0.00 3.16
2113 2198 0.969894 CCGTTCACTCTTCCTCCAGT 59.030 55.000 0.00 0.00 0.00 4.00
2114 2199 1.067495 GTCCGTTCACTCTTCCTCCAG 60.067 57.143 0.00 0.00 0.00 3.86
2115 2200 0.966920 GTCCGTTCACTCTTCCTCCA 59.033 55.000 0.00 0.00 0.00 3.86
2116 2201 1.258676 AGTCCGTTCACTCTTCCTCC 58.741 55.000 0.00 0.00 0.00 4.30
2117 2202 2.559231 AGAAGTCCGTTCACTCTTCCTC 59.441 50.000 0.00 0.00 37.67 3.71
2118 2203 2.297597 CAGAAGTCCGTTCACTCTTCCT 59.702 50.000 0.00 0.00 37.67 3.36
2119 2204 2.296471 TCAGAAGTCCGTTCACTCTTCC 59.704 50.000 0.00 0.00 37.67 3.46
2120 2205 3.570559 CTCAGAAGTCCGTTCACTCTTC 58.429 50.000 0.00 0.00 37.67 2.87
2121 2206 2.288518 GCTCAGAAGTCCGTTCACTCTT 60.289 50.000 0.00 0.00 37.67 2.85
2122 2207 1.271102 GCTCAGAAGTCCGTTCACTCT 59.729 52.381 0.00 0.00 37.67 3.24
2123 2208 1.000163 TGCTCAGAAGTCCGTTCACTC 60.000 52.381 0.00 0.00 37.67 3.51
2124 2209 1.040646 TGCTCAGAAGTCCGTTCACT 58.959 50.000 0.00 0.00 37.67 3.41
2125 2210 1.527311 GTTGCTCAGAAGTCCGTTCAC 59.473 52.381 0.00 0.00 37.67 3.18
2126 2211 1.412710 AGTTGCTCAGAAGTCCGTTCA 59.587 47.619 0.00 0.00 37.67 3.18
2127 2212 2.062519 GAGTTGCTCAGAAGTCCGTTC 58.937 52.381 0.00 0.00 35.08 3.95
2128 2213 1.689273 AGAGTTGCTCAGAAGTCCGTT 59.311 47.619 0.00 0.00 32.06 4.44
2129 2214 1.000283 CAGAGTTGCTCAGAAGTCCGT 60.000 52.381 0.00 0.00 32.06 4.69
2130 2215 1.270826 TCAGAGTTGCTCAGAAGTCCG 59.729 52.381 0.00 0.00 32.06 4.79
2131 2216 2.930455 GCTCAGAGTTGCTCAGAAGTCC 60.930 54.545 0.00 0.00 32.06 3.85
2132 2217 2.288702 TGCTCAGAGTTGCTCAGAAGTC 60.289 50.000 0.00 0.00 32.06 3.01
2133 2218 1.690893 TGCTCAGAGTTGCTCAGAAGT 59.309 47.619 0.00 0.00 32.06 3.01
2134 2219 2.452295 TGCTCAGAGTTGCTCAGAAG 57.548 50.000 0.00 0.00 32.06 2.85
2135 2220 2.916702 TTGCTCAGAGTTGCTCAGAA 57.083 45.000 0.00 0.00 32.06 3.02
2136 2221 2.916702 TTTGCTCAGAGTTGCTCAGA 57.083 45.000 0.00 0.00 32.06 3.27
2137 2222 3.976793 TTTTTGCTCAGAGTTGCTCAG 57.023 42.857 0.00 0.00 32.06 3.35
2138 2223 6.389830 TTTATTTTTGCTCAGAGTTGCTCA 57.610 33.333 0.00 0.00 32.06 4.26
2139 2224 6.697019 TGTTTTATTTTTGCTCAGAGTTGCTC 59.303 34.615 0.00 0.00 0.00 4.26
2140 2225 6.572519 TGTTTTATTTTTGCTCAGAGTTGCT 58.427 32.000 0.00 0.00 0.00 3.91
2141 2226 6.826893 TGTTTTATTTTTGCTCAGAGTTGC 57.173 33.333 0.00 0.00 0.00 4.17
2144 2229 9.598517 TGATTTTGTTTTATTTTTGCTCAGAGT 57.401 25.926 0.00 0.00 0.00 3.24
2146 2231 8.550376 GCTGATTTTGTTTTATTTTTGCTCAGA 58.450 29.630 0.00 0.00 0.00 3.27
2147 2232 7.799914 GGCTGATTTTGTTTTATTTTTGCTCAG 59.200 33.333 0.00 0.00 0.00 3.35
2148 2233 7.255070 GGGCTGATTTTGTTTTATTTTTGCTCA 60.255 33.333 0.00 0.00 0.00 4.26
2149 2234 7.077605 GGGCTGATTTTGTTTTATTTTTGCTC 58.922 34.615 0.00 0.00 0.00 4.26
2150 2235 6.016360 GGGGCTGATTTTGTTTTATTTTTGCT 60.016 34.615 0.00 0.00 0.00 3.91
2151 2236 6.148948 GGGGCTGATTTTGTTTTATTTTTGC 58.851 36.000 0.00 0.00 0.00 3.68
2152 2237 6.264067 TGGGGGCTGATTTTGTTTTATTTTTG 59.736 34.615 0.00 0.00 0.00 2.44
2153 2238 6.368805 TGGGGGCTGATTTTGTTTTATTTTT 58.631 32.000 0.00 0.00 0.00 1.94
2154 2239 5.946486 TGGGGGCTGATTTTGTTTTATTTT 58.054 33.333 0.00 0.00 0.00 1.82
2155 2240 5.574970 TGGGGGCTGATTTTGTTTTATTT 57.425 34.783 0.00 0.00 0.00 1.40
2156 2241 5.163152 TGTTGGGGGCTGATTTTGTTTTATT 60.163 36.000 0.00 0.00 0.00 1.40
2157 2242 4.349342 TGTTGGGGGCTGATTTTGTTTTAT 59.651 37.500 0.00 0.00 0.00 1.40
2158 2243 3.711704 TGTTGGGGGCTGATTTTGTTTTA 59.288 39.130 0.00 0.00 0.00 1.52
2159 2244 2.507471 TGTTGGGGGCTGATTTTGTTTT 59.493 40.909 0.00 0.00 0.00 2.43
2160 2245 2.104622 CTGTTGGGGGCTGATTTTGTTT 59.895 45.455 0.00 0.00 0.00 2.83
2161 2246 1.693606 CTGTTGGGGGCTGATTTTGTT 59.306 47.619 0.00 0.00 0.00 2.83
2162 2247 1.341080 CTGTTGGGGGCTGATTTTGT 58.659 50.000 0.00 0.00 0.00 2.83
2163 2248 1.001181 CACTGTTGGGGGCTGATTTTG 59.999 52.381 0.00 0.00 0.00 2.44
2164 2249 1.341080 CACTGTTGGGGGCTGATTTT 58.659 50.000 0.00 0.00 0.00 1.82
2165 2250 1.187567 GCACTGTTGGGGGCTGATTT 61.188 55.000 0.00 0.00 0.00 2.17
2166 2251 1.607467 GCACTGTTGGGGGCTGATT 60.607 57.895 0.00 0.00 0.00 2.57
2167 2252 2.036256 GCACTGTTGGGGGCTGAT 59.964 61.111 0.00 0.00 0.00 2.90
2168 2253 2.844195 ATGCACTGTTGGGGGCTGA 61.844 57.895 0.00 0.00 0.00 4.26
2169 2254 2.283388 ATGCACTGTTGGGGGCTG 60.283 61.111 0.00 0.00 0.00 4.85
2170 2255 2.283388 CATGCACTGTTGGGGGCT 60.283 61.111 0.00 0.00 0.00 5.19
2171 2256 1.907807 TTCATGCACTGTTGGGGGC 60.908 57.895 0.00 0.00 0.00 5.80
2172 2257 0.827089 TGTTCATGCACTGTTGGGGG 60.827 55.000 0.00 0.00 0.00 5.40
2173 2258 1.039068 TTGTTCATGCACTGTTGGGG 58.961 50.000 0.00 0.00 0.00 4.96
2174 2259 4.517952 TTATTGTTCATGCACTGTTGGG 57.482 40.909 0.00 0.00 0.00 4.12
2175 2260 7.424227 AAATTTATTGTTCATGCACTGTTGG 57.576 32.000 0.00 0.00 0.00 3.77
2176 2261 9.372541 GAAAAATTTATTGTTCATGCACTGTTG 57.627 29.630 0.00 0.00 34.78 3.33
2177 2262 8.558700 GGAAAAATTTATTGTTCATGCACTGTT 58.441 29.630 7.48 0.00 36.05 3.16
2178 2263 7.714377 TGGAAAAATTTATTGTTCATGCACTGT 59.286 29.630 7.48 0.00 36.05 3.55
2179 2264 8.085720 TGGAAAAATTTATTGTTCATGCACTG 57.914 30.769 7.48 0.00 36.05 3.66
2180 2265 8.851541 ATGGAAAAATTTATTGTTCATGCACT 57.148 26.923 7.48 0.00 36.05 4.40
2218 2303 5.555017 ACATCTGAGCAGCTCTTAGAAAAA 58.445 37.500 23.15 0.00 40.29 1.94
2219 2304 5.157940 ACATCTGAGCAGCTCTTAGAAAA 57.842 39.130 23.15 0.00 40.29 2.29
2220 2305 4.676459 CGACATCTGAGCAGCTCTTAGAAA 60.676 45.833 23.15 0.68 40.29 2.52
2221 2306 3.181492 CGACATCTGAGCAGCTCTTAGAA 60.181 47.826 23.15 1.45 40.29 2.10
2222 2307 2.357323 CGACATCTGAGCAGCTCTTAGA 59.643 50.000 23.15 17.94 41.02 2.10
2223 2308 2.730069 CGACATCTGAGCAGCTCTTAG 58.270 52.381 23.15 13.18 0.00 2.18
2224 2309 1.202348 GCGACATCTGAGCAGCTCTTA 60.202 52.381 23.15 11.46 0.00 2.10
2225 2310 0.459934 GCGACATCTGAGCAGCTCTT 60.460 55.000 23.15 5.67 0.00 2.85
2226 2311 1.141449 GCGACATCTGAGCAGCTCT 59.859 57.895 23.15 2.04 0.00 4.09
2227 2312 0.738762 TTGCGACATCTGAGCAGCTC 60.739 55.000 16.21 16.21 42.19 4.09
2228 2313 0.107800 ATTGCGACATCTGAGCAGCT 60.108 50.000 0.00 0.00 42.19 4.24
2229 2314 0.027716 CATTGCGACATCTGAGCAGC 59.972 55.000 0.00 0.00 42.19 5.25
2230 2315 1.593469 CTCATTGCGACATCTGAGCAG 59.407 52.381 0.00 0.00 42.19 4.24
2231 2316 1.648504 CTCATTGCGACATCTGAGCA 58.351 50.000 0.00 2.15 39.33 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.