Multiple sequence alignment - TraesCS7B01G427400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G427400 chr7B 100.000 2536 0 0 1 2536 696596210 696593675 0.000000e+00 4684.0
1 TraesCS7B01G427400 chr7B 81.346 1560 168 66 515 2013 694799260 694797763 0.000000e+00 1155.0
2 TraesCS7B01G427400 chr7B 83.717 1173 116 44 858 2004 693821610 693820487 0.000000e+00 1038.0
3 TraesCS7B01G427400 chr7B 80.983 773 90 28 788 1532 696383167 696382424 6.130000e-156 560.0
4 TraesCS7B01G427400 chr7B 79.091 770 82 41 708 1454 693200660 693199947 8.270000e-125 457.0
5 TraesCS7B01G427400 chr7B 82.407 540 54 25 1491 2013 693199943 693199428 1.390000e-117 433.0
6 TraesCS7B01G427400 chr7B 76.478 846 109 48 1070 1876 698857572 698856778 6.620000e-101 377.0
7 TraesCS7B01G427400 chr7B 87.385 325 26 10 2081 2398 580155084 580155400 2.400000e-95 359.0
8 TraesCS7B01G427400 chr7B 92.213 244 19 0 1 244 64407845 64408088 1.870000e-91 346.0
9 TraesCS7B01G427400 chr7B 96.552 203 7 0 41 243 704319051 704318849 1.120000e-88 337.0
10 TraesCS7B01G427400 chr7B 89.879 247 8 3 1 230 654202163 654202409 4.100000e-78 302.0
11 TraesCS7B01G427400 chr7B 93.182 176 9 3 293 467 186866688 186866515 3.240000e-64 255.0
12 TraesCS7B01G427400 chr7B 87.805 205 8 6 41 245 725515512 725515699 9.130000e-55 224.0
13 TraesCS7B01G427400 chr7B 81.786 280 21 15 515 772 693821918 693821647 9.190000e-50 207.0
14 TraesCS7B01G427400 chr7B 93.750 128 6 2 2411 2536 693820473 693820346 9.260000e-45 191.0
15 TraesCS7B01G427400 chr7B 89.583 144 12 3 2396 2536 694793200 694793057 2.000000e-41 180.0
16 TraesCS7B01G427400 chr7B 90.909 88 4 1 2398 2481 693199436 693199349 5.730000e-22 115.0
17 TraesCS7B01G427400 chr7B 93.478 46 3 0 244 289 694799363 694799318 4.530000e-08 69.4
18 TraesCS7B01G427400 chr7A 84.757 1253 131 38 780 1998 699766733 699765507 0.000000e+00 1201.0
19 TraesCS7B01G427400 chr7A 86.364 330 35 4 2076 2397 542633218 542633545 4.010000e-93 351.0
20 TraesCS7B01G427400 chr7A 95.215 209 10 0 38 246 20610102 20610310 5.230000e-87 331.0
21 TraesCS7B01G427400 chrUn 89.635 849 54 12 607 1429 77587303 77586463 0.000000e+00 1050.0
22 TraesCS7B01G427400 chrUn 83.877 521 62 14 904 1408 83371271 83370757 6.350000e-131 477.0
23 TraesCS7B01G427400 chrUn 81.150 313 39 9 2088 2396 38423793 38423497 1.520000e-57 233.0
24 TraesCS7B01G427400 chrUn 77.972 286 50 11 2097 2377 35377830 35377553 1.560000e-37 167.0
25 TraesCS7B01G427400 chrUn 94.737 57 1 1 244 298 77588929 77588873 1.250000e-13 87.9
26 TraesCS7B01G427400 chr7D 80.621 1352 136 65 707 2008 610235324 610236599 0.000000e+00 929.0
27 TraesCS7B01G427400 chr7D 84.112 963 100 29 1080 2013 607562194 607561256 0.000000e+00 881.0
28 TraesCS7B01G427400 chr7D 81.948 698 82 25 974 1652 608488207 608487535 3.690000e-153 551.0
29 TraesCS7B01G427400 chr7D 81.583 619 67 28 468 1061 607564274 607563678 3.820000e-128 468.0
30 TraesCS7B01G427400 chr7D 84.335 466 52 11 1087 1549 514993777 514993330 1.080000e-118 436.0
31 TraesCS7B01G427400 chr7D 81.769 554 56 26 1060 1605 608450469 608449953 3.020000e-114 422.0
32 TraesCS7B01G427400 chr7D 87.821 312 26 9 2088 2396 464363305 464363003 3.100000e-94 355.0
33 TraesCS7B01G427400 chr7D 85.152 330 31 9 2076 2397 195286688 195287007 3.150000e-84 322.0
34 TraesCS7B01G427400 chr7D 83.692 325 33 7 2076 2396 503995855 503995547 3.190000e-74 289.0
35 TraesCS7B01G427400 chr7D 80.457 394 46 11 1037 1424 607546652 607546284 3.210000e-69 272.0
36 TraesCS7B01G427400 chr7D 93.567 171 10 1 294 463 519933609 519933439 1.160000e-63 254.0
37 TraesCS7B01G427400 chr7D 92.086 139 11 0 2398 2536 608445936 608445798 1.990000e-46 196.0
38 TraesCS7B01G427400 chr7D 89.062 64 4 1 714 777 608474835 608474775 2.710000e-10 76.8
39 TraesCS7B01G427400 chr7D 78.322 143 9 15 714 853 608488399 608488276 3.500000e-09 73.1
40 TraesCS7B01G427400 chr4A 79.979 949 127 35 861 1771 661969311 661970234 2.130000e-180 641.0
41 TraesCS7B01G427400 chr4A 94.787 211 10 1 38 248 621758043 621758252 6.760000e-86 327.0
42 TraesCS7B01G427400 chr4A 90.385 260 8 1 1 243 650905501 650905242 2.430000e-85 326.0
43 TraesCS7B01G427400 chr4A 79.167 168 10 17 714 876 661973375 661973522 2.690000e-15 93.5
44 TraesCS7B01G427400 chr5D 85.572 402 33 12 2015 2397 529762249 529762644 5.080000e-107 398.0
45 TraesCS7B01G427400 chr5D 81.592 402 45 13 2018 2396 22868080 22867685 3.170000e-79 305.0
46 TraesCS7B01G427400 chr5D 90.811 185 15 2 296 479 355074727 355074544 1.950000e-61 246.0
47 TraesCS7B01G427400 chr5D 81.562 320 36 20 2076 2387 442013864 442013560 2.520000e-60 243.0
48 TraesCS7B01G427400 chr5D 77.961 304 46 12 2079 2376 307359259 307358971 1.210000e-38 171.0
49 TraesCS7B01G427400 chr5D 75.415 301 53 16 2091 2377 539451746 539451453 2.650000e-25 126.0
50 TraesCS7B01G427400 chr5D 79.085 153 28 4 2092 2243 81732003 81732152 4.460000e-18 102.0
51 TraesCS7B01G427400 chr1A 95.062 243 12 0 1 243 23212399 23212157 1.420000e-102 383.0
52 TraesCS7B01G427400 chr1A 77.097 310 56 10 2092 2397 30295941 30296239 5.610000e-37 165.0
53 TraesCS7B01G427400 chr5A 93.443 244 16 0 1 244 24148932 24149175 1.850000e-96 363.0
54 TraesCS7B01G427400 chr5A 96.602 206 7 0 38 243 544207351 544207556 2.420000e-90 342.0
55 TraesCS7B01G427400 chr5A 95.732 164 6 1 297 459 506546517 506546680 1.930000e-66 263.0
56 TraesCS7B01G427400 chr6B 92.800 250 17 1 1 250 693817825 693817577 6.670000e-96 361.0
57 TraesCS7B01G427400 chr6B 85.890 326 33 9 2077 2396 573613842 573613524 4.040000e-88 335.0
58 TraesCS7B01G427400 chr6B 84.013 319 29 14 2078 2388 87724195 87724499 1.150000e-73 287.0
59 TraesCS7B01G427400 chr6B 85.551 263 21 1 1 246 256327771 256327509 2.500000e-65 259.0
60 TraesCS7B01G427400 chr2B 83.756 394 47 10 2015 2396 471572740 471572352 8.630000e-95 357.0
61 TraesCS7B01G427400 chr2B 89.655 261 9 2 1 243 56295852 56295592 1.460000e-82 316.0
62 TraesCS7B01G427400 chr2A 85.429 350 34 11 2058 2396 18748938 18748595 5.190000e-92 348.0
63 TraesCS7B01G427400 chr2A 84.330 351 38 9 2059 2396 16999168 16999514 6.760000e-86 327.0
64 TraesCS7B01G427400 chr3A 96.602 206 7 0 38 243 9766586 9766791 2.420000e-90 342.0
65 TraesCS7B01G427400 chr6A 85.583 326 31 7 2079 2397 473183482 473183798 6.760000e-86 327.0
66 TraesCS7B01G427400 chr4B 82.353 391 54 10 2015 2396 638357223 638357607 2.430000e-85 326.0
67 TraesCS7B01G427400 chr3B 84.543 317 35 8 2088 2396 219748231 219747921 4.100000e-78 302.0
68 TraesCS7B01G427400 chr3B 92.655 177 11 2 293 467 495839437 495839613 1.160000e-63 254.0
69 TraesCS7B01G427400 chr5B 83.851 322 39 7 2078 2396 451147631 451147942 6.860000e-76 294.0
70 TraesCS7B01G427400 chr5B 88.406 207 15 9 295 496 660591181 660591383 9.070000e-60 241.0
71 TraesCS7B01G427400 chr4D 85.099 302 27 10 2096 2396 48070324 48070040 2.470000e-75 292.0
72 TraesCS7B01G427400 chr4D 80.605 397 47 11 2014 2396 315595783 315595403 1.920000e-71 279.0
73 TraesCS7B01G427400 chr4D 95.152 165 7 1 297 460 122586122 122586286 2.500000e-65 259.0
74 TraesCS7B01G427400 chr4D 79.634 383 46 20 2024 2387 42146267 42145898 1.950000e-61 246.0
75 TraesCS7B01G427400 chr4D 80.818 318 36 12 2080 2396 477586006 477586299 2.540000e-55 226.0
76 TraesCS7B01G427400 chr4D 74.691 324 56 14 2077 2389 507755617 507755925 1.230000e-23 121.0
77 TraesCS7B01G427400 chr3D 81.510 384 42 15 2026 2395 585095767 585096135 3.190000e-74 289.0
78 TraesCS7B01G427400 chr3D 91.257 183 13 3 294 474 105120267 105120448 1.950000e-61 246.0
79 TraesCS7B01G427400 chr1D 81.201 383 42 17 2024 2387 21845252 21844881 5.340000e-72 281.0
80 TraesCS7B01G427400 chr1D 84.028 288 27 11 2079 2356 8741981 8742259 2.500000e-65 259.0
81 TraesCS7B01G427400 chr1D 76.636 321 58 14 2015 2330 412505855 412505547 7.260000e-36 161.0
82 TraesCS7B01G427400 chr1D 80.469 128 23 2 2170 2297 303002037 303002162 2.080000e-16 97.1
83 TraesCS7B01G427400 chr1D 98.113 53 1 0 2341 2393 8742272 8742324 2.690000e-15 93.5
84 TraesCS7B01G427400 chr1D 94.231 52 3 0 2345 2396 363124784 363124835 2.090000e-11 80.5
85 TraesCS7B01G427400 chr2D 93.064 173 10 2 293 463 576852437 576852265 4.190000e-63 252.0
86 TraesCS7B01G427400 chr6D 81.994 311 21 16 2087 2396 48530174 48529898 5.460000e-57 231.0
87 TraesCS7B01G427400 chr6D 77.259 343 55 20 2055 2387 37466923 37466594 2.000000e-41 180.0
88 TraesCS7B01G427400 chr6D 83.851 161 19 5 2172 2331 352882489 352882643 2.030000e-31 147.0
89 TraesCS7B01G427400 chr6D 76.241 282 48 13 2056 2327 409833653 409833925 5.690000e-27 132.0
90 TraesCS7B01G427400 chr6D 76.818 220 41 9 2077 2291 53172992 53173206 5.730000e-22 115.0
91 TraesCS7B01G427400 chr6D 94.000 50 3 0 2347 2396 98196913 98196962 2.710000e-10 76.8
92 TraesCS7B01G427400 chr6D 90.566 53 3 1 2336 2386 262235950 262235898 4.530000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G427400 chr7B 696593675 696596210 2535 True 4684.000000 4684 100.000000 1 2536 1 chr7B.!!$R4 2535
1 TraesCS7B01G427400 chr7B 694797763 694799363 1600 True 612.200000 1155 87.412000 244 2013 2 chr7B.!!$R9 1769
2 TraesCS7B01G427400 chr7B 696382424 696383167 743 True 560.000000 560 80.983000 788 1532 1 chr7B.!!$R3 744
3 TraesCS7B01G427400 chr7B 693820346 693821918 1572 True 478.666667 1038 86.417667 515 2536 3 chr7B.!!$R8 2021
4 TraesCS7B01G427400 chr7B 698856778 698857572 794 True 377.000000 377 76.478000 1070 1876 1 chr7B.!!$R5 806
5 TraesCS7B01G427400 chr7B 693199349 693200660 1311 True 335.000000 457 84.135667 708 2481 3 chr7B.!!$R7 1773
6 TraesCS7B01G427400 chr7A 699765507 699766733 1226 True 1201.000000 1201 84.757000 780 1998 1 chr7A.!!$R1 1218
7 TraesCS7B01G427400 chrUn 77586463 77588929 2466 True 568.950000 1050 92.186000 244 1429 2 chrUn.!!$R4 1185
8 TraesCS7B01G427400 chrUn 83370757 83371271 514 True 477.000000 477 83.877000 904 1408 1 chrUn.!!$R3 504
9 TraesCS7B01G427400 chr7D 610235324 610236599 1275 False 929.000000 929 80.621000 707 2008 1 chr7D.!!$F2 1301
10 TraesCS7B01G427400 chr7D 607561256 607564274 3018 True 674.500000 881 82.847500 468 2013 2 chr7D.!!$R9 1545
11 TraesCS7B01G427400 chr7D 608449953 608450469 516 True 422.000000 422 81.769000 1060 1605 1 chr7D.!!$R7 545
12 TraesCS7B01G427400 chr7D 608487535 608488399 864 True 312.050000 551 80.135000 714 1652 2 chr7D.!!$R10 938
13 TraesCS7B01G427400 chr4A 661969311 661973522 4211 False 367.250000 641 79.573000 714 1771 2 chr4A.!!$F2 1057

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
215 216 0.027979 CGTCGGCATACATTTGGCTG 59.972 55.0 0.0 0.0 39.86 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1740 4923 0.114954 ATTCCTTGCACCCACACCAT 59.885 50.0 0.0 0.0 0.0 3.55 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.185867 GTTAGCCGGCCGTGATGA 59.814 61.111 26.15 8.39 0.00 2.92
18 19 2.171725 GTTAGCCGGCCGTGATGAC 61.172 63.158 26.15 16.79 0.00 3.06
19 20 3.379865 TTAGCCGGCCGTGATGACC 62.380 63.158 26.15 2.88 0.00 4.02
22 23 4.752879 CCGGCCGTGATGACCGTT 62.753 66.667 26.12 0.00 45.49 4.44
23 24 3.487202 CGGCCGTGATGACCGTTG 61.487 66.667 19.50 0.00 42.01 4.10
24 25 2.358247 GGCCGTGATGACCGTTGT 60.358 61.111 0.00 0.00 0.00 3.32
25 26 2.388232 GGCCGTGATGACCGTTGTC 61.388 63.158 0.00 0.00 42.12 3.18
69 70 1.022735 GCAGCTGTAGGCGTAGTCTA 58.977 55.000 16.64 0.00 46.45 2.59
78 79 2.516906 AGGCGTAGTCTAGGATAAGCC 58.483 52.381 17.91 17.91 46.45 4.35
79 80 1.199558 GGCGTAGTCTAGGATAAGCCG 59.800 57.143 13.30 0.00 43.43 5.52
80 81 2.149578 GCGTAGTCTAGGATAAGCCGA 58.850 52.381 3.72 0.00 43.43 5.54
81 82 2.095819 GCGTAGTCTAGGATAAGCCGAC 60.096 54.545 3.72 0.00 43.43 4.79
82 83 2.157279 CGTAGTCTAGGATAAGCCGACG 59.843 54.545 0.00 0.00 43.43 5.12
83 84 1.606903 AGTCTAGGATAAGCCGACGG 58.393 55.000 10.29 10.29 43.43 4.79
93 94 2.887568 GCCGACGGCTGAGATGTG 60.888 66.667 31.30 0.00 46.69 3.21
94 95 2.887568 CCGACGGCTGAGATGTGC 60.888 66.667 0.00 0.00 0.00 4.57
95 96 2.887568 CGACGGCTGAGATGTGCC 60.888 66.667 0.00 0.00 45.25 5.01
99 100 2.887568 GGCTGAGATGTGCCGACG 60.888 66.667 0.00 0.00 39.71 5.12
100 101 2.887568 GCTGAGATGTGCCGACGG 60.888 66.667 10.29 10.29 0.00 4.79
116 117 4.129737 GGCTGCTGTCGGCGTAGA 62.130 66.667 6.85 0.00 45.50 2.59
117 118 2.881352 GCTGCTGTCGGCGTAGAC 60.881 66.667 6.85 0.00 45.43 2.59
127 128 1.580437 GGCGTAGACGGAGATAGCC 59.420 63.158 3.97 0.00 40.23 3.93
128 129 1.580437 GCGTAGACGGAGATAGCCC 59.420 63.158 3.97 0.00 40.23 5.19
143 144 2.888534 CCCGACGGCCATTGTACG 60.889 66.667 8.86 0.00 0.00 3.67
144 145 3.560278 CCGACGGCCATTGTACGC 61.560 66.667 2.24 0.00 0.00 4.42
145 146 3.560278 CGACGGCCATTGTACGCC 61.560 66.667 2.24 0.00 42.05 5.68
150 151 3.560278 GCCATTGTACGCCGACGG 61.560 66.667 10.29 10.29 46.04 4.79
151 152 3.560278 CCATTGTACGCCGACGGC 61.560 66.667 29.10 29.10 46.75 5.68
161 162 3.528370 CCGACGGCCAGGACCTAG 61.528 72.222 2.24 0.00 0.00 3.02
162 163 4.208686 CGACGGCCAGGACCTAGC 62.209 72.222 2.24 2.88 0.00 3.42
163 164 2.760385 GACGGCCAGGACCTAGCT 60.760 66.667 11.89 0.00 0.00 3.32
164 165 3.077556 ACGGCCAGGACCTAGCTG 61.078 66.667 18.11 18.11 38.87 4.24
165 166 3.077556 CGGCCAGGACCTAGCTGT 61.078 66.667 12.24 0.00 0.00 4.40
166 167 2.904131 GGCCAGGACCTAGCTGTC 59.096 66.667 11.89 0.00 34.42 3.51
167 168 2.496817 GCCAGGACCTAGCTGTCG 59.503 66.667 4.45 0.00 36.07 4.35
168 169 3.082579 GCCAGGACCTAGCTGTCGG 62.083 68.421 4.45 0.00 36.07 4.79
169 170 2.496817 CAGGACCTAGCTGTCGGC 59.503 66.667 0.00 0.00 42.19 5.54
170 171 2.037367 AGGACCTAGCTGTCGGCA 59.963 61.111 6.39 0.00 44.79 5.69
171 172 1.381872 AGGACCTAGCTGTCGGCAT 60.382 57.895 6.39 0.00 44.79 4.40
172 173 0.106167 AGGACCTAGCTGTCGGCATA 60.106 55.000 6.39 0.00 44.79 3.14
173 174 0.315568 GGACCTAGCTGTCGGCATAG 59.684 60.000 6.39 5.00 44.79 2.23
174 175 0.319125 GACCTAGCTGTCGGCATAGC 60.319 60.000 6.39 0.00 44.79 2.97
176 177 0.038709 CCTAGCTGTCGGCATAGCTC 60.039 60.000 7.07 0.00 46.76 4.09
177 178 0.386605 CTAGCTGTCGGCATAGCTCG 60.387 60.000 7.07 0.00 46.76 5.03
178 179 1.796190 TAGCTGTCGGCATAGCTCGG 61.796 60.000 7.07 0.00 46.76 4.63
179 180 3.120105 CTGTCGGCATAGCTCGGA 58.880 61.111 0.00 0.00 0.00 4.55
180 181 1.662608 CTGTCGGCATAGCTCGGAT 59.337 57.895 0.00 0.00 0.00 4.18
181 182 0.032678 CTGTCGGCATAGCTCGGATT 59.967 55.000 0.00 0.00 0.00 3.01
182 183 1.269723 CTGTCGGCATAGCTCGGATTA 59.730 52.381 0.00 0.00 0.00 1.75
183 184 1.269723 TGTCGGCATAGCTCGGATTAG 59.730 52.381 0.00 0.00 0.00 1.73
184 185 0.888619 TCGGCATAGCTCGGATTAGG 59.111 55.000 0.00 0.00 0.00 2.69
185 186 0.737715 CGGCATAGCTCGGATTAGGC 60.738 60.000 0.00 0.00 0.00 3.93
186 187 0.391793 GGCATAGCTCGGATTAGGCC 60.392 60.000 0.00 0.00 39.23 5.19
194 195 3.937447 GGATTAGGCCGACGGGGG 61.937 72.222 17.22 0.00 35.78 5.40
213 214 1.355210 CCGTCGGCATACATTTGGC 59.645 57.895 0.00 0.00 38.71 4.52
214 215 1.095228 CCGTCGGCATACATTTGGCT 61.095 55.000 0.00 0.00 39.86 4.75
215 216 0.027979 CGTCGGCATACATTTGGCTG 59.972 55.000 0.00 0.00 39.86 4.85
216 217 1.094785 GTCGGCATACATTTGGCTGT 58.905 50.000 0.00 0.00 39.86 4.40
217 218 1.064060 GTCGGCATACATTTGGCTGTC 59.936 52.381 0.00 0.00 39.86 3.51
218 219 0.027979 CGGCATACATTTGGCTGTCG 59.972 55.000 0.00 0.00 39.86 4.35
219 220 0.381801 GGCATACATTTGGCTGTCGG 59.618 55.000 0.00 0.00 39.00 4.79
220 221 0.248621 GCATACATTTGGCTGTCGGC 60.249 55.000 0.00 0.00 40.90 5.54
221 222 1.382522 CATACATTTGGCTGTCGGCT 58.617 50.000 3.10 0.00 41.46 5.52
222 223 1.745087 CATACATTTGGCTGTCGGCTT 59.255 47.619 3.10 0.00 41.46 4.35
223 224 2.772077 TACATTTGGCTGTCGGCTTA 57.228 45.000 3.10 0.00 41.46 3.09
224 225 1.453155 ACATTTGGCTGTCGGCTTAG 58.547 50.000 3.10 0.00 41.46 2.18
225 226 1.003118 ACATTTGGCTGTCGGCTTAGA 59.997 47.619 3.10 0.00 41.46 2.10
226 227 1.667724 CATTTGGCTGTCGGCTTAGAG 59.332 52.381 3.10 0.00 41.46 2.43
227 228 0.673644 TTTGGCTGTCGGCTTAGAGC 60.674 55.000 3.10 0.33 41.46 4.09
236 237 4.522971 GCTTAGAGCCCTGTTCCG 57.477 61.111 0.00 0.00 34.48 4.30
237 238 1.153349 GCTTAGAGCCCTGTTCCGG 60.153 63.158 0.00 0.00 34.48 5.14
238 239 1.900545 GCTTAGAGCCCTGTTCCGGT 61.901 60.000 0.00 0.00 34.48 5.28
239 240 1.481871 CTTAGAGCCCTGTTCCGGTA 58.518 55.000 0.00 0.00 0.00 4.02
240 241 1.409427 CTTAGAGCCCTGTTCCGGTAG 59.591 57.143 0.00 0.00 0.00 3.18
241 242 0.333993 TAGAGCCCTGTTCCGGTAGT 59.666 55.000 0.00 0.00 0.00 2.73
242 243 1.218316 GAGCCCTGTTCCGGTAGTG 59.782 63.158 0.00 0.00 0.00 2.74
285 286 2.357517 ATCCATCGATTCGGCCGC 60.358 61.111 23.51 5.56 0.00 6.53
298 301 2.474712 GCCGCGTGTGCTTTCTAC 59.525 61.111 4.92 0.00 39.65 2.59
299 302 2.027625 GCCGCGTGTGCTTTCTACT 61.028 57.895 4.92 0.00 39.65 2.57
300 303 1.956620 GCCGCGTGTGCTTTCTACTC 61.957 60.000 4.92 0.00 39.65 2.59
301 304 1.352156 CCGCGTGTGCTTTCTACTCC 61.352 60.000 4.92 0.00 39.65 3.85
302 305 1.352156 CGCGTGTGCTTTCTACTCCC 61.352 60.000 0.00 0.00 39.65 4.30
303 306 1.019805 GCGTGTGCTTTCTACTCCCC 61.020 60.000 0.00 0.00 38.39 4.81
304 307 0.391263 CGTGTGCTTTCTACTCCCCC 60.391 60.000 0.00 0.00 0.00 5.40
305 308 0.391263 GTGTGCTTTCTACTCCCCCG 60.391 60.000 0.00 0.00 0.00 5.73
306 309 0.834687 TGTGCTTTCTACTCCCCCGT 60.835 55.000 0.00 0.00 0.00 5.28
307 310 0.323957 GTGCTTTCTACTCCCCCGTT 59.676 55.000 0.00 0.00 0.00 4.44
308 311 0.611714 TGCTTTCTACTCCCCCGTTC 59.388 55.000 0.00 0.00 0.00 3.95
309 312 0.107800 GCTTTCTACTCCCCCGTTCC 60.108 60.000 0.00 0.00 0.00 3.62
310 313 1.569653 CTTTCTACTCCCCCGTTCCT 58.430 55.000 0.00 0.00 0.00 3.36
311 314 2.743553 CTTTCTACTCCCCCGTTCCTA 58.256 52.381 0.00 0.00 0.00 2.94
312 315 2.925966 TTCTACTCCCCCGTTCCTAA 57.074 50.000 0.00 0.00 0.00 2.69
313 316 2.925966 TCTACTCCCCCGTTCCTAAA 57.074 50.000 0.00 0.00 0.00 1.85
314 317 3.409804 TCTACTCCCCCGTTCCTAAAT 57.590 47.619 0.00 0.00 0.00 1.40
315 318 4.541250 TCTACTCCCCCGTTCCTAAATA 57.459 45.455 0.00 0.00 0.00 1.40
316 319 5.083953 TCTACTCCCCCGTTCCTAAATAT 57.916 43.478 0.00 0.00 0.00 1.28
317 320 5.470501 TCTACTCCCCCGTTCCTAAATATT 58.529 41.667 0.00 0.00 0.00 1.28
318 321 5.907079 TCTACTCCCCCGTTCCTAAATATTT 59.093 40.000 5.89 5.89 0.00 1.40
319 322 4.788679 ACTCCCCCGTTCCTAAATATTTG 58.211 43.478 11.05 1.40 0.00 2.32
320 323 4.228895 ACTCCCCCGTTCCTAAATATTTGT 59.771 41.667 11.05 0.00 0.00 2.83
321 324 4.784177 TCCCCCGTTCCTAAATATTTGTC 58.216 43.478 11.05 0.00 0.00 3.18
322 325 4.475747 TCCCCCGTTCCTAAATATTTGTCT 59.524 41.667 11.05 0.00 0.00 3.41
323 326 5.044698 TCCCCCGTTCCTAAATATTTGTCTT 60.045 40.000 11.05 0.00 0.00 3.01
324 327 5.655090 CCCCCGTTCCTAAATATTTGTCTTT 59.345 40.000 11.05 0.00 0.00 2.52
325 328 6.183360 CCCCCGTTCCTAAATATTTGTCTTTC 60.183 42.308 11.05 0.00 0.00 2.62
326 329 6.602009 CCCCGTTCCTAAATATTTGTCTTTCT 59.398 38.462 11.05 0.00 0.00 2.52
327 330 7.771826 CCCCGTTCCTAAATATTTGTCTTTCTA 59.228 37.037 11.05 0.00 0.00 2.10
328 331 8.827677 CCCGTTCCTAAATATTTGTCTTTCTAG 58.172 37.037 11.05 0.00 0.00 2.43
329 332 9.595823 CCGTTCCTAAATATTTGTCTTTCTAGA 57.404 33.333 11.05 0.00 0.00 2.43
345 348 8.268850 TCTTTCTAGACATTTCAAATGGCTAC 57.731 34.615 20.19 6.25 38.54 3.58
346 349 7.336931 TCTTTCTAGACATTTCAAATGGCTACC 59.663 37.037 20.19 1.96 38.54 3.18
347 350 6.061022 TCTAGACATTTCAAATGGCTACCA 57.939 37.500 20.19 8.41 38.54 3.25
348 351 5.880332 TCTAGACATTTCAAATGGCTACCAC 59.120 40.000 20.19 0.99 38.54 4.16
349 352 4.406456 AGACATTTCAAATGGCTACCACA 58.594 39.130 17.52 0.00 35.20 4.17
350 353 5.018809 AGACATTTCAAATGGCTACCACAT 58.981 37.500 17.52 0.00 35.20 3.21
351 354 6.186957 AGACATTTCAAATGGCTACCACATA 58.813 36.000 17.52 0.00 35.20 2.29
352 355 6.095440 AGACATTTCAAATGGCTACCACATAC 59.905 38.462 17.52 0.00 35.20 2.39
353 356 4.955925 TTTCAAATGGCTACCACATACG 57.044 40.909 0.00 0.00 35.80 3.06
354 357 2.912771 TCAAATGGCTACCACATACGG 58.087 47.619 0.00 0.00 35.80 4.02
355 358 2.502130 TCAAATGGCTACCACATACGGA 59.498 45.455 0.00 0.00 35.80 4.69
356 359 3.135712 TCAAATGGCTACCACATACGGAT 59.864 43.478 0.00 0.00 35.80 4.18
357 360 2.839486 ATGGCTACCACATACGGATG 57.161 50.000 5.94 5.94 35.80 3.51
359 362 2.668625 TGGCTACCACATACGGATGTA 58.331 47.619 14.23 0.00 44.82 2.29
360 363 3.236047 TGGCTACCACATACGGATGTAT 58.764 45.455 14.23 7.46 44.82 2.29
400 403 9.771534 AGAGTATAGATTCACTTATTTTGCTCC 57.228 33.333 0.00 0.00 0.00 4.70
401 404 8.594881 AGTATAGATTCACTTATTTTGCTCCG 57.405 34.615 0.00 0.00 0.00 4.63
402 405 8.204836 AGTATAGATTCACTTATTTTGCTCCGT 58.795 33.333 0.00 0.00 0.00 4.69
403 406 9.472361 GTATAGATTCACTTATTTTGCTCCGTA 57.528 33.333 0.00 0.00 0.00 4.02
405 408 7.251704 AGATTCACTTATTTTGCTCCGTATG 57.748 36.000 0.00 0.00 0.00 2.39
406 409 6.823689 AGATTCACTTATTTTGCTCCGTATGT 59.176 34.615 0.00 0.00 0.00 2.29
407 410 7.985184 AGATTCACTTATTTTGCTCCGTATGTA 59.015 33.333 0.00 0.00 0.00 2.29
408 411 7.534085 TTCACTTATTTTGCTCCGTATGTAG 57.466 36.000 0.00 0.00 0.00 2.74
409 412 6.636705 TCACTTATTTTGCTCCGTATGTAGT 58.363 36.000 0.00 0.00 0.00 2.73
410 413 6.755141 TCACTTATTTTGCTCCGTATGTAGTC 59.245 38.462 0.00 0.00 0.00 2.59
411 414 6.533723 CACTTATTTTGCTCCGTATGTAGTCA 59.466 38.462 0.00 0.00 0.00 3.41
412 415 6.534079 ACTTATTTTGCTCCGTATGTAGTCAC 59.466 38.462 0.00 0.00 0.00 3.67
413 416 4.530710 TTTTGCTCCGTATGTAGTCACT 57.469 40.909 0.00 0.00 0.00 3.41
414 417 4.530710 TTTGCTCCGTATGTAGTCACTT 57.469 40.909 0.00 0.00 0.00 3.16
415 418 5.648178 TTTGCTCCGTATGTAGTCACTTA 57.352 39.130 0.00 0.00 0.00 2.24
416 419 4.627611 TGCTCCGTATGTAGTCACTTAC 57.372 45.455 0.00 0.00 33.85 2.34
417 420 4.267536 TGCTCCGTATGTAGTCACTTACT 58.732 43.478 0.00 0.00 42.62 2.24
418 421 4.095932 TGCTCCGTATGTAGTCACTTACTG 59.904 45.833 0.00 0.00 39.39 2.74
419 422 4.334759 GCTCCGTATGTAGTCACTTACTGA 59.665 45.833 0.00 0.00 39.39 3.41
420 423 5.163683 GCTCCGTATGTAGTCACTTACTGAA 60.164 44.000 0.00 0.00 39.39 3.02
421 424 6.624423 GCTCCGTATGTAGTCACTTACTGAAA 60.624 42.308 0.00 0.00 39.39 2.69
422 425 7.400599 TCCGTATGTAGTCACTTACTGAAAT 57.599 36.000 0.00 0.00 39.39 2.17
423 426 8.510243 TCCGTATGTAGTCACTTACTGAAATA 57.490 34.615 0.00 0.00 39.39 1.40
424 427 9.128404 TCCGTATGTAGTCACTTACTGAAATAT 57.872 33.333 0.00 0.00 39.39 1.28
425 428 9.395707 CCGTATGTAGTCACTTACTGAAATATC 57.604 37.037 0.00 0.00 39.39 1.63
454 457 9.971922 GAAAGACAAATATTTAGGAATGGATGG 57.028 33.333 0.00 0.00 0.00 3.51
455 458 9.713684 AAAGACAAATATTTAGGAATGGATGGA 57.286 29.630 0.00 0.00 0.00 3.41
456 459 8.930846 AGACAAATATTTAGGAATGGATGGAG 57.069 34.615 0.00 0.00 0.00 3.86
457 460 8.506083 AGACAAATATTTAGGAATGGATGGAGT 58.494 33.333 0.00 0.00 0.00 3.85
458 461 9.793259 GACAAATATTTAGGAATGGATGGAGTA 57.207 33.333 0.00 0.00 0.00 2.59
464 467 4.298103 AGGAATGGATGGAGTATCATGC 57.702 45.455 0.00 0.00 37.54 4.06
465 468 3.654321 AGGAATGGATGGAGTATCATGCA 59.346 43.478 1.86 1.86 46.52 3.96
486 489 4.155462 GCATTGCATGTTCTCTTCTCTTGA 59.845 41.667 3.15 0.00 0.00 3.02
494 497 6.166984 TGTTCTCTTCTCTTGAGTGTGATT 57.833 37.500 0.00 0.00 33.59 2.57
495 498 5.987953 TGTTCTCTTCTCTTGAGTGTGATTG 59.012 40.000 0.00 0.00 33.59 2.67
496 499 6.183360 TGTTCTCTTCTCTTGAGTGTGATTGA 60.183 38.462 0.00 0.00 33.59 2.57
497 500 6.602410 TCTCTTCTCTTGAGTGTGATTGAT 57.398 37.500 0.00 0.00 33.59 2.57
508 511 6.398095 TGAGTGTGATTGATGAGAACGTAAT 58.602 36.000 0.00 0.00 0.00 1.89
542 1994 6.598503 TGAGCATCAGTTATTGATCTCCAAT 58.401 36.000 11.40 0.00 44.76 3.16
600 2063 5.238868 ACGTGATACAGATAGTGCTAACGAT 59.761 40.000 0.00 0.00 32.30 3.73
601 2064 5.565638 CGTGATACAGATAGTGCTAACGATG 59.434 44.000 0.00 0.00 0.00 3.84
604 2067 3.953766 ACAGATAGTGCTAACGATGACG 58.046 45.455 0.00 0.00 45.75 4.35
605 2068 3.626217 ACAGATAGTGCTAACGATGACGA 59.374 43.478 0.00 0.00 42.66 4.20
674 2141 9.871238 GTGTACATAAAGAAGGTCTGAGATTAA 57.129 33.333 0.00 0.00 0.00 1.40
686 2153 3.388024 TCTGAGATTAACGGCCAGCTAAT 59.612 43.478 2.24 1.82 0.00 1.73
697 2164 2.092914 GGCCAGCTAATCTACCACTGTT 60.093 50.000 0.00 0.00 0.00 3.16
699 2166 2.939103 CCAGCTAATCTACCACTGTTGC 59.061 50.000 0.00 0.00 0.00 4.17
703 2170 4.466370 AGCTAATCTACCACTGTTGCTACA 59.534 41.667 0.03 0.03 0.00 2.74
778 2259 2.027625 CGTCCAAGCAACGTCTCCC 61.028 63.158 0.00 0.00 35.47 4.30
811 2310 2.863346 CGGAACCACCCTCACGTCA 61.863 63.158 0.00 0.00 34.64 4.35
960 2484 1.325355 TCTCCCTATTTAGTCCCGCG 58.675 55.000 0.00 0.00 0.00 6.46
961 2485 0.319641 CTCCCTATTTAGTCCCGCGC 60.320 60.000 0.00 0.00 0.00 6.86
962 2486 1.663702 CCCTATTTAGTCCCGCGCG 60.664 63.158 25.67 25.67 0.00 6.86
1025 2590 2.757868 CTCCACTTCCTCACTCGATCTT 59.242 50.000 0.00 0.00 0.00 2.40
1035 2600 4.099266 CCTCACTCGATCTTTTCTCTCCAT 59.901 45.833 0.00 0.00 0.00 3.41
1077 3321 2.325082 GCACACCAGTACCAAGGCG 61.325 63.158 0.00 0.00 0.00 5.52
1180 4223 0.379669 GCTGCTTTGGATCACCATCG 59.620 55.000 0.00 0.00 46.34 3.84
1508 4597 3.950395 TCTCTGAGCGAGATTGAATCAGA 59.050 43.478 8.03 1.09 43.72 3.27
1528 4649 8.798859 ATCAGAACATCTGTATAAAAGCAGTT 57.201 30.769 7.21 0.00 44.58 3.16
1529 4650 8.621532 TCAGAACATCTGTATAAAAGCAGTTT 57.378 30.769 7.21 0.00 44.58 2.66
1530 4651 9.719355 TCAGAACATCTGTATAAAAGCAGTTTA 57.281 29.630 7.21 0.00 44.58 2.01
1549 4670 1.134228 ATTATACGGCCGGGGAAACT 58.866 50.000 31.76 9.01 0.00 2.66
1565 4687 3.057245 GGAAACTTACGTACCGAGGAGTT 60.057 47.826 0.00 0.00 32.35 3.01
1572 4702 2.190981 CGTACCGAGGAGTTGCAATAC 58.809 52.381 0.59 0.00 0.00 1.89
1584 4714 6.317140 AGGAGTTGCAATACAATCATGTACTG 59.683 38.462 0.59 0.00 44.47 2.74
1701 4877 3.567397 TGGTCGGGAATTTCTTTTGGAA 58.433 40.909 0.00 0.00 0.00 3.53
1704 4880 4.462834 GGTCGGGAATTTCTTTTGGAAGAT 59.537 41.667 0.00 0.00 41.35 2.40
1706 4882 6.183360 GGTCGGGAATTTCTTTTGGAAGATAG 60.183 42.308 0.00 0.00 41.35 2.08
1707 4883 6.598064 GTCGGGAATTTCTTTTGGAAGATAGA 59.402 38.462 0.00 0.00 41.35 1.98
1708 4884 7.120726 GTCGGGAATTTCTTTTGGAAGATAGAA 59.879 37.037 0.00 0.00 41.35 2.10
1709 4885 7.120726 TCGGGAATTTCTTTTGGAAGATAGAAC 59.879 37.037 0.00 0.00 41.35 3.01
1710 4886 7.121315 CGGGAATTTCTTTTGGAAGATAGAACT 59.879 37.037 0.00 0.00 41.35 3.01
1711 4887 8.246871 GGGAATTTCTTTTGGAAGATAGAACTG 58.753 37.037 0.00 0.00 41.35 3.16
1712 4888 8.797438 GGAATTTCTTTTGGAAGATAGAACTGT 58.203 33.333 0.00 0.00 41.35 3.55
1713 4889 9.617975 GAATTTCTTTTGGAAGATAGAACTGTG 57.382 33.333 0.00 0.00 41.35 3.66
1714 4890 8.924511 ATTTCTTTTGGAAGATAGAACTGTGA 57.075 30.769 0.00 0.00 41.35 3.58
1715 4891 8.746052 TTTCTTTTGGAAGATAGAACTGTGAA 57.254 30.769 0.00 0.00 41.35 3.18
1721 4897 6.768483 TGGAAGATAGAACTGTGAATGAACA 58.232 36.000 0.00 0.00 0.00 3.18
1730 4910 8.050778 AGAACTGTGAATGAACAAAGTTTACA 57.949 30.769 0.00 0.00 44.98 2.41
1740 4923 6.634805 TGAACAAAGTTTACATTTGGCTTGA 58.365 32.000 3.74 0.00 41.05 3.02
1752 4937 2.639327 GGCTTGATGGTGTGGGTGC 61.639 63.158 0.00 0.00 0.00 5.01
1753 4938 1.902918 GCTTGATGGTGTGGGTGCA 60.903 57.895 0.00 0.00 0.00 4.57
1754 4939 1.462731 GCTTGATGGTGTGGGTGCAA 61.463 55.000 0.00 0.00 0.00 4.08
1784 4991 3.118454 CGTCACCATCCACCGTGC 61.118 66.667 0.00 0.00 0.00 5.34
1884 5107 5.533154 AGTCAAAATTATCGAACCAACCACA 59.467 36.000 0.00 0.00 0.00 4.17
1885 5108 6.208599 AGTCAAAATTATCGAACCAACCACAT 59.791 34.615 0.00 0.00 0.00 3.21
1973 5201 5.607119 TTTCGCGCTAAGAAAAATCTTCT 57.393 34.783 5.56 0.00 35.00 2.85
2001 5231 6.127083 TGCACTTCCCTTTCTTTCAGAAAAAT 60.127 34.615 0.00 0.00 42.95 1.82
2007 5238 5.337571 CCCTTTCTTTCAGAAAAATAGGGGC 60.338 44.000 14.31 0.00 42.95 5.80
2008 5239 5.337571 CCTTTCTTTCAGAAAAATAGGGGCC 60.338 44.000 0.00 0.00 42.95 5.80
2013 5244 4.329638 TCAGAAAAATAGGGGCCAATCA 57.670 40.909 4.39 0.00 0.00 2.57
2014 5245 4.280819 TCAGAAAAATAGGGGCCAATCAG 58.719 43.478 4.39 0.00 0.00 2.90
2015 5246 4.017591 TCAGAAAAATAGGGGCCAATCAGA 60.018 41.667 4.39 0.00 0.00 3.27
2016 5247 4.098501 CAGAAAAATAGGGGCCAATCAGAC 59.901 45.833 4.39 0.00 0.00 3.51
2017 5248 2.348411 AAATAGGGGCCAATCAGACG 57.652 50.000 4.39 0.00 0.00 4.18
2018 5249 0.179018 AATAGGGGCCAATCAGACGC 60.179 55.000 4.39 0.00 0.00 5.19
2019 5250 1.344953 ATAGGGGCCAATCAGACGCA 61.345 55.000 4.39 0.00 0.00 5.24
2020 5251 1.971505 TAGGGGCCAATCAGACGCAG 61.972 60.000 4.39 0.00 0.00 5.18
2021 5252 2.268920 GGGCCAATCAGACGCAGA 59.731 61.111 4.39 0.00 0.00 4.26
2022 5253 1.817099 GGGCCAATCAGACGCAGAG 60.817 63.158 4.39 0.00 0.00 3.35
2023 5254 1.078848 GGCCAATCAGACGCAGAGT 60.079 57.895 0.00 0.00 0.00 3.24
2024 5255 0.674895 GGCCAATCAGACGCAGAGTT 60.675 55.000 0.00 0.00 0.00 3.01
2025 5256 1.160137 GCCAATCAGACGCAGAGTTT 58.840 50.000 0.00 0.00 0.00 2.66
2026 5257 1.129437 GCCAATCAGACGCAGAGTTTC 59.871 52.381 0.00 0.00 0.00 2.78
2027 5258 2.693069 CCAATCAGACGCAGAGTTTCT 58.307 47.619 0.00 0.00 0.00 2.52
2028 5259 2.414481 CCAATCAGACGCAGAGTTTCTG 59.586 50.000 1.75 1.75 46.90 3.02
2035 5266 4.559835 CAGAGTTTCTGCTCGCGA 57.440 55.556 9.26 9.26 37.72 5.87
2036 5267 2.357792 CAGAGTTTCTGCTCGCGAG 58.642 57.895 31.37 31.37 37.72 5.03
2055 5286 3.840831 CTCATTTGAGCTCGGGTGA 57.159 52.632 9.64 11.31 35.13 4.02
2056 5287 2.099141 CTCATTTGAGCTCGGGTGAA 57.901 50.000 9.64 0.00 35.13 3.18
2057 5288 1.734465 CTCATTTGAGCTCGGGTGAAC 59.266 52.381 9.64 0.00 35.13 3.18
2058 5289 1.071542 TCATTTGAGCTCGGGTGAACA 59.928 47.619 9.64 0.00 0.00 3.18
2059 5290 1.879380 CATTTGAGCTCGGGTGAACAA 59.121 47.619 9.64 0.00 0.00 2.83
2060 5291 2.270352 TTTGAGCTCGGGTGAACAAT 57.730 45.000 9.64 0.00 0.00 2.71
2061 5292 3.410631 TTTGAGCTCGGGTGAACAATA 57.589 42.857 9.64 0.00 0.00 1.90
2062 5293 3.410631 TTGAGCTCGGGTGAACAATAA 57.589 42.857 9.64 0.00 0.00 1.40
2063 5294 3.410631 TGAGCTCGGGTGAACAATAAA 57.589 42.857 9.64 0.00 0.00 1.40
2064 5295 3.745799 TGAGCTCGGGTGAACAATAAAA 58.254 40.909 9.64 0.00 0.00 1.52
2065 5296 4.331968 TGAGCTCGGGTGAACAATAAAAT 58.668 39.130 9.64 0.00 0.00 1.82
2066 5297 4.394920 TGAGCTCGGGTGAACAATAAAATC 59.605 41.667 9.64 0.00 0.00 2.17
2067 5298 3.374058 AGCTCGGGTGAACAATAAAATCG 59.626 43.478 0.00 0.00 0.00 3.34
2068 5299 3.372822 GCTCGGGTGAACAATAAAATCGA 59.627 43.478 0.00 0.00 0.00 3.59
2069 5300 4.142773 GCTCGGGTGAACAATAAAATCGAA 60.143 41.667 0.00 0.00 0.00 3.71
2070 5301 5.618195 GCTCGGGTGAACAATAAAATCGAAA 60.618 40.000 0.00 0.00 0.00 3.46
2071 5302 6.315091 TCGGGTGAACAATAAAATCGAAAA 57.685 33.333 0.00 0.00 0.00 2.29
2072 5303 6.736123 TCGGGTGAACAATAAAATCGAAAAA 58.264 32.000 0.00 0.00 0.00 1.94
2102 5333 6.597832 TTTTTGGAGGAGAAACTTTGACAA 57.402 33.333 0.00 0.00 0.00 3.18
2103 5334 6.597832 TTTTGGAGGAGAAACTTTGACAAA 57.402 33.333 0.00 0.00 0.00 2.83
2104 5335 6.597832 TTTGGAGGAGAAACTTTGACAAAA 57.402 33.333 1.62 0.00 0.00 2.44
2105 5336 5.835113 TGGAGGAGAAACTTTGACAAAAG 57.165 39.130 1.62 0.00 46.93 2.27
2117 5348 6.710692 CTTTGACAAAAGTTTGAAGTGCTT 57.289 33.333 10.66 0.00 40.55 3.91
2118 5349 6.464895 TTTGACAAAAGTTTGAAGTGCTTG 57.535 33.333 10.66 0.00 40.55 4.01
2119 5350 3.925913 TGACAAAAGTTTGAAGTGCTTGC 59.074 39.130 10.66 0.00 40.55 4.01
2120 5351 3.924144 ACAAAAGTTTGAAGTGCTTGCA 58.076 36.364 10.66 0.00 40.55 4.08
2121 5352 4.314121 ACAAAAGTTTGAAGTGCTTGCAA 58.686 34.783 10.66 0.00 40.55 4.08
2122 5353 4.754114 ACAAAAGTTTGAAGTGCTTGCAAA 59.246 33.333 10.66 0.00 40.55 3.68
2123 5354 5.238214 ACAAAAGTTTGAAGTGCTTGCAAAA 59.762 32.000 10.66 0.00 40.55 2.44
2124 5355 5.938438 AAAGTTTGAAGTGCTTGCAAAAA 57.062 30.435 0.00 0.00 33.80 1.94
2125 5356 6.499234 AAAGTTTGAAGTGCTTGCAAAAAT 57.501 29.167 0.00 0.00 33.80 1.82
2126 5357 6.499234 AAGTTTGAAGTGCTTGCAAAAATT 57.501 29.167 0.00 0.00 33.80 1.82
2127 5358 7.608308 AAGTTTGAAGTGCTTGCAAAAATTA 57.392 28.000 0.00 0.00 33.80 1.40
2128 5359 7.237920 AGTTTGAAGTGCTTGCAAAAATTAG 57.762 32.000 0.00 0.00 33.80 1.73
2129 5360 6.818142 AGTTTGAAGTGCTTGCAAAAATTAGT 59.182 30.769 0.00 0.00 33.80 2.24
2130 5361 6.826893 TTGAAGTGCTTGCAAAAATTAGTC 57.173 33.333 0.00 0.00 0.00 2.59
2131 5362 6.147864 TGAAGTGCTTGCAAAAATTAGTCT 57.852 33.333 0.00 0.00 0.00 3.24
2132 5363 6.572519 TGAAGTGCTTGCAAAAATTAGTCTT 58.427 32.000 0.00 0.00 0.00 3.01
2133 5364 6.476380 TGAAGTGCTTGCAAAAATTAGTCTTG 59.524 34.615 0.00 0.00 0.00 3.02
2134 5365 6.147864 AGTGCTTGCAAAAATTAGTCTTGA 57.852 33.333 0.00 0.00 0.00 3.02
2135 5366 6.572519 AGTGCTTGCAAAAATTAGTCTTGAA 58.427 32.000 0.00 0.00 0.00 2.69
2136 5367 7.041107 AGTGCTTGCAAAAATTAGTCTTGAAA 58.959 30.769 0.00 0.00 0.00 2.69
2137 5368 7.712205 AGTGCTTGCAAAAATTAGTCTTGAAAT 59.288 29.630 0.00 0.00 0.00 2.17
2138 5369 8.006027 GTGCTTGCAAAAATTAGTCTTGAAATC 58.994 33.333 0.00 0.00 0.00 2.17
2139 5370 7.710044 TGCTTGCAAAAATTAGTCTTGAAATCA 59.290 29.630 0.00 0.00 0.00 2.57
2140 5371 8.715088 GCTTGCAAAAATTAGTCTTGAAATCAT 58.285 29.630 0.00 0.00 0.00 2.45
2153 5384 7.936301 AGTCTTGAAATCATATTCCTAGAAGGC 59.064 37.037 0.00 0.00 34.61 4.35
2154 5385 6.931281 TCTTGAAATCATATTCCTAGAAGGCG 59.069 38.462 0.00 0.00 34.61 5.52
2155 5386 6.174720 TGAAATCATATTCCTAGAAGGCGT 57.825 37.500 0.00 0.00 34.61 5.68
2156 5387 5.991606 TGAAATCATATTCCTAGAAGGCGTG 59.008 40.000 0.00 0.00 34.61 5.34
2157 5388 4.543590 ATCATATTCCTAGAAGGCGTGG 57.456 45.455 0.00 0.00 34.61 4.94
2158 5389 2.037251 TCATATTCCTAGAAGGCGTGGC 59.963 50.000 0.00 0.00 34.61 5.01
2159 5390 1.491668 TATTCCTAGAAGGCGTGGCA 58.508 50.000 0.00 0.00 34.61 4.92
2160 5391 0.618458 ATTCCTAGAAGGCGTGGCAA 59.382 50.000 0.00 0.00 34.61 4.52
2161 5392 0.398696 TTCCTAGAAGGCGTGGCAAA 59.601 50.000 0.00 0.00 34.61 3.68
2162 5393 0.398696 TCCTAGAAGGCGTGGCAAAA 59.601 50.000 0.00 0.00 34.61 2.44
2163 5394 1.202830 TCCTAGAAGGCGTGGCAAAAA 60.203 47.619 0.00 0.00 34.61 1.94
2184 5415 5.613358 AAAAGACCGCTACTCTGAAAATG 57.387 39.130 0.00 0.00 0.00 2.32
2185 5416 2.622436 AGACCGCTACTCTGAAAATGC 58.378 47.619 0.00 0.00 0.00 3.56
2186 5417 2.234908 AGACCGCTACTCTGAAAATGCT 59.765 45.455 0.00 0.00 0.00 3.79
2187 5418 3.447586 AGACCGCTACTCTGAAAATGCTA 59.552 43.478 0.00 0.00 0.00 3.49
2188 5419 3.522553 ACCGCTACTCTGAAAATGCTAC 58.477 45.455 0.00 0.00 0.00 3.58
2189 5420 3.195825 ACCGCTACTCTGAAAATGCTACT 59.804 43.478 0.00 0.00 0.00 2.57
2190 5421 4.184629 CCGCTACTCTGAAAATGCTACTT 58.815 43.478 0.00 0.00 0.00 2.24
2191 5422 4.631813 CCGCTACTCTGAAAATGCTACTTT 59.368 41.667 0.00 0.00 0.00 2.66
2192 5423 5.220491 CCGCTACTCTGAAAATGCTACTTTC 60.220 44.000 0.00 0.00 34.09 2.62
2193 5424 5.499334 CGCTACTCTGAAAATGCTACTTTCG 60.499 44.000 0.00 0.00 35.88 3.46
2194 5425 5.577164 GCTACTCTGAAAATGCTACTTTCGA 59.423 40.000 0.00 0.00 35.88 3.71
2195 5426 6.090898 GCTACTCTGAAAATGCTACTTTCGAA 59.909 38.462 0.00 0.00 35.88 3.71
2196 5427 6.861065 ACTCTGAAAATGCTACTTTCGAAA 57.139 33.333 10.71 10.71 35.88 3.46
2197 5428 6.892691 ACTCTGAAAATGCTACTTTCGAAAG 58.107 36.000 31.29 31.29 41.73 2.62
2198 5429 5.689819 TCTGAAAATGCTACTTTCGAAAGC 58.310 37.500 32.49 22.60 39.63 3.51
2205 5436 4.545610 TGCTACTTTCGAAAGCATTTTGG 58.454 39.130 32.49 18.18 39.27 3.28
2206 5437 4.277174 TGCTACTTTCGAAAGCATTTTGGA 59.723 37.500 32.49 15.55 39.27 3.53
2207 5438 4.853743 GCTACTTTCGAAAGCATTTTGGAG 59.146 41.667 32.49 16.38 39.27 3.86
2208 5439 3.642705 ACTTTCGAAAGCATTTTGGAGC 58.357 40.909 32.49 0.00 39.27 4.70
2209 5440 3.068024 ACTTTCGAAAGCATTTTGGAGCA 59.932 39.130 32.49 0.00 39.27 4.26
2210 5441 2.704725 TCGAAAGCATTTTGGAGCAC 57.295 45.000 0.00 0.00 39.27 4.40
2211 5442 2.229792 TCGAAAGCATTTTGGAGCACT 58.770 42.857 0.00 0.00 39.27 4.40
2212 5443 2.622942 TCGAAAGCATTTTGGAGCACTT 59.377 40.909 0.00 0.00 39.27 3.16
2213 5444 3.818210 TCGAAAGCATTTTGGAGCACTTA 59.182 39.130 0.00 0.00 39.27 2.24
2214 5445 4.277174 TCGAAAGCATTTTGGAGCACTTAA 59.723 37.500 0.00 0.00 39.27 1.85
2215 5446 5.048083 TCGAAAGCATTTTGGAGCACTTAAT 60.048 36.000 0.00 0.00 39.27 1.40
2216 5447 5.634859 CGAAAGCATTTTGGAGCACTTAATT 59.365 36.000 0.00 0.00 39.27 1.40
2217 5448 6.146021 CGAAAGCATTTTGGAGCACTTAATTT 59.854 34.615 0.00 0.00 39.27 1.82
2218 5449 6.790285 AAGCATTTTGGAGCACTTAATTTG 57.210 33.333 0.00 0.00 0.00 2.32
2219 5450 5.857268 AGCATTTTGGAGCACTTAATTTGT 58.143 33.333 0.00 0.00 0.00 2.83
2220 5451 6.290605 AGCATTTTGGAGCACTTAATTTGTT 58.709 32.000 0.00 0.00 0.00 2.83
2221 5452 6.767423 AGCATTTTGGAGCACTTAATTTGTTT 59.233 30.769 0.00 0.00 0.00 2.83
2222 5453 7.282901 AGCATTTTGGAGCACTTAATTTGTTTT 59.717 29.630 0.00 0.00 0.00 2.43
2223 5454 7.914871 GCATTTTGGAGCACTTAATTTGTTTTT 59.085 29.630 0.00 0.00 0.00 1.94
2243 5474 0.589223 TTTTTGCGACGCCTTACAGG 59.411 50.000 18.69 0.00 38.80 4.00
2244 5475 0.249953 TTTTGCGACGCCTTACAGGA 60.250 50.000 18.69 0.00 37.67 3.86
2245 5476 0.249953 TTTGCGACGCCTTACAGGAA 60.250 50.000 18.69 0.00 37.67 3.36
2246 5477 0.036765 TTGCGACGCCTTACAGGAAT 60.037 50.000 18.69 0.00 37.67 3.01
2247 5478 0.739462 TGCGACGCCTTACAGGAATG 60.739 55.000 18.69 0.00 37.67 2.67
2248 5479 0.739813 GCGACGCCTTACAGGAATGT 60.740 55.000 9.14 0.00 37.67 2.71
2249 5480 1.470285 GCGACGCCTTACAGGAATGTA 60.470 52.381 9.14 0.00 37.67 2.29
2250 5481 2.883574 CGACGCCTTACAGGAATGTAA 58.116 47.619 0.00 1.31 37.67 2.41
2251 5482 3.454375 CGACGCCTTACAGGAATGTAAT 58.546 45.455 1.62 0.00 37.67 1.89
2252 5483 3.869246 CGACGCCTTACAGGAATGTAATT 59.131 43.478 1.62 0.00 37.67 1.40
2284 5515 8.816640 CAAATTTTTGTAAGCACCTAGAACAT 57.183 30.769 0.00 0.00 33.59 2.71
2285 5516 9.260002 CAAATTTTTGTAAGCACCTAGAACATT 57.740 29.630 0.00 0.00 33.59 2.71
2286 5517 9.830975 AAATTTTTGTAAGCACCTAGAACATTT 57.169 25.926 0.00 0.00 0.00 2.32
2287 5518 8.816640 ATTTTTGTAAGCACCTAGAACATTTG 57.183 30.769 0.00 0.00 0.00 2.32
2288 5519 6.952773 TTTGTAAGCACCTAGAACATTTGT 57.047 33.333 0.00 0.00 0.00 2.83
2289 5520 6.554334 TTGTAAGCACCTAGAACATTTGTC 57.446 37.500 0.00 0.00 0.00 3.18
2290 5521 5.616270 TGTAAGCACCTAGAACATTTGTCA 58.384 37.500 0.00 0.00 0.00 3.58
2291 5522 6.058833 TGTAAGCACCTAGAACATTTGTCAA 58.941 36.000 0.00 0.00 0.00 3.18
2292 5523 6.714810 TGTAAGCACCTAGAACATTTGTCAAT 59.285 34.615 0.00 0.00 0.00 2.57
2293 5524 5.633830 AGCACCTAGAACATTTGTCAATG 57.366 39.130 0.00 0.00 44.90 2.82
2306 5537 7.551035 CATTTGTCAATGTTTCTCCCAAAAA 57.449 32.000 0.00 0.00 35.86 1.94
2353 5584 9.483062 TTTTTGCATTTTGTTTCGATTTTACTG 57.517 25.926 0.00 0.00 0.00 2.74
2354 5585 7.763172 TTGCATTTTGTTTCGATTTTACTGT 57.237 28.000 0.00 0.00 0.00 3.55
2355 5586 7.763172 TGCATTTTGTTTCGATTTTACTGTT 57.237 28.000 0.00 0.00 0.00 3.16
2356 5587 7.836512 TGCATTTTGTTTCGATTTTACTGTTC 58.163 30.769 0.00 0.00 0.00 3.18
2357 5588 7.489435 TGCATTTTGTTTCGATTTTACTGTTCA 59.511 29.630 0.00 0.00 0.00 3.18
2358 5589 7.787480 GCATTTTGTTTCGATTTTACTGTTCAC 59.213 33.333 0.00 0.00 0.00 3.18
2359 5590 7.743520 TTTTGTTTCGATTTTACTGTTCACC 57.256 32.000 0.00 0.00 0.00 4.02
2360 5591 5.085636 TGTTTCGATTTTACTGTTCACCG 57.914 39.130 0.00 0.00 0.00 4.94
2361 5592 4.809958 TGTTTCGATTTTACTGTTCACCGA 59.190 37.500 0.00 0.00 0.00 4.69
2362 5593 5.050634 TGTTTCGATTTTACTGTTCACCGAG 60.051 40.000 0.00 0.00 0.00 4.63
2363 5594 2.991190 TCGATTTTACTGTTCACCGAGC 59.009 45.455 0.00 0.00 0.00 5.03
2364 5595 2.993899 CGATTTTACTGTTCACCGAGCT 59.006 45.455 0.00 0.00 0.00 4.09
2365 5596 3.060895 CGATTTTACTGTTCACCGAGCTC 59.939 47.826 2.73 2.73 0.00 4.09
2366 5597 3.462483 TTTTACTGTTCACCGAGCTCA 57.538 42.857 15.40 0.00 0.00 4.26
2367 5598 3.678056 TTTACTGTTCACCGAGCTCAT 57.322 42.857 15.40 0.00 0.00 2.90
2368 5599 3.678056 TTACTGTTCACCGAGCTCATT 57.322 42.857 15.40 0.00 0.00 2.57
2369 5600 2.550830 ACTGTTCACCGAGCTCATTT 57.449 45.000 15.40 0.00 0.00 2.32
2370 5601 2.146342 ACTGTTCACCGAGCTCATTTG 58.854 47.619 15.40 7.19 0.00 2.32
2371 5602 2.224281 ACTGTTCACCGAGCTCATTTGA 60.224 45.455 15.40 9.55 0.00 2.69
2372 5603 2.414481 CTGTTCACCGAGCTCATTTGAG 59.586 50.000 15.40 3.13 44.75 3.02
2390 5621 2.665000 CTCGGGAGCAGAAAGGCA 59.335 61.111 0.00 0.00 35.83 4.75
2391 5622 1.743252 CTCGGGAGCAGAAAGGCAC 60.743 63.158 0.00 0.00 35.83 5.01
2405 5636 3.567473 GCACTTTCAGGGCGACTC 58.433 61.111 0.00 0.00 33.47 3.36
2406 5637 1.301716 GCACTTTCAGGGCGACTCA 60.302 57.895 0.00 0.00 33.47 3.41
2527 8033 1.534476 TGGGTCCAAGGTAGCACGA 60.534 57.895 0.00 0.00 0.00 4.35
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.171725 GTCATCACGGCCGGCTAAC 61.172 63.158 31.76 16.52 0.00 2.34
2 3 3.845259 GGTCATCACGGCCGGCTA 61.845 66.667 31.76 14.83 0.00 3.93
7 8 2.358247 ACAACGGTCATCACGGCC 60.358 61.111 0.00 0.00 35.23 6.13
8 9 3.165498 GACAACGGTCATCACGGC 58.835 61.111 0.00 0.00 43.73 5.68
46 47 2.938539 CTACGCCTACAGCTGCCGTC 62.939 65.000 20.45 6.17 40.39 4.79
47 48 3.064987 CTACGCCTACAGCTGCCGT 62.065 63.158 15.27 18.72 40.39 5.68
48 49 2.278857 CTACGCCTACAGCTGCCG 60.279 66.667 15.27 13.85 40.39 5.69
49 50 1.227002 GACTACGCCTACAGCTGCC 60.227 63.158 15.27 0.00 40.39 4.85
50 51 1.002251 CTAGACTACGCCTACAGCTGC 60.002 57.143 15.27 0.00 40.39 5.25
51 52 1.604755 CCTAGACTACGCCTACAGCTG 59.395 57.143 13.48 13.48 40.39 4.24
52 53 1.489649 TCCTAGACTACGCCTACAGCT 59.510 52.381 0.00 0.00 40.39 4.24
53 54 1.964552 TCCTAGACTACGCCTACAGC 58.035 55.000 0.00 0.00 38.52 4.40
54 55 4.154556 GCTTATCCTAGACTACGCCTACAG 59.845 50.000 0.00 0.00 0.00 2.74
55 56 4.070716 GCTTATCCTAGACTACGCCTACA 58.929 47.826 0.00 0.00 0.00 2.74
56 57 3.439825 GGCTTATCCTAGACTACGCCTAC 59.560 52.174 10.10 0.00 33.68 3.18
57 58 3.683802 GGCTTATCCTAGACTACGCCTA 58.316 50.000 10.10 0.00 33.68 3.93
58 59 2.516906 GGCTTATCCTAGACTACGCCT 58.483 52.381 10.10 0.00 33.68 5.52
59 60 1.199558 CGGCTTATCCTAGACTACGCC 59.800 57.143 8.23 8.23 0.00 5.68
60 61 2.095819 GTCGGCTTATCCTAGACTACGC 60.096 54.545 0.00 0.00 0.00 4.42
61 62 2.157279 CGTCGGCTTATCCTAGACTACG 59.843 54.545 0.00 0.00 36.26 3.51
62 63 2.483491 CCGTCGGCTTATCCTAGACTAC 59.517 54.545 0.00 0.00 0.00 2.73
63 64 2.775890 CCGTCGGCTTATCCTAGACTA 58.224 52.381 0.00 0.00 0.00 2.59
64 65 1.606903 CCGTCGGCTTATCCTAGACT 58.393 55.000 0.00 0.00 0.00 3.24
65 66 0.039346 GCCGTCGGCTTATCCTAGAC 60.039 60.000 28.98 0.00 46.69 2.59
66 67 2.338381 GCCGTCGGCTTATCCTAGA 58.662 57.895 28.98 0.00 46.69 2.43
67 68 4.968197 GCCGTCGGCTTATCCTAG 57.032 61.111 28.98 0.00 46.69 3.02
77 78 2.887568 GCACATCTCAGCCGTCGG 60.888 66.667 6.99 6.99 0.00 4.79
78 79 2.887568 GGCACATCTCAGCCGTCG 60.888 66.667 0.00 0.00 41.70 5.12
83 84 2.887568 CCGTCGGCACATCTCAGC 60.888 66.667 0.00 0.00 0.00 4.26
99 100 4.129737 TCTACGCCGACAGCAGCC 62.130 66.667 0.00 0.00 44.04 4.85
100 101 2.881352 GTCTACGCCGACAGCAGC 60.881 66.667 0.00 0.00 44.04 5.25
101 102 2.577112 CGTCTACGCCGACAGCAG 60.577 66.667 0.00 0.00 44.04 4.24
102 103 4.111016 CCGTCTACGCCGACAGCA 62.111 66.667 0.00 0.00 44.04 4.41
103 104 3.736482 CTCCGTCTACGCCGACAGC 62.736 68.421 0.00 0.00 38.18 4.40
104 105 1.437772 ATCTCCGTCTACGCCGACAG 61.438 60.000 0.00 0.00 38.18 3.51
105 106 0.179076 TATCTCCGTCTACGCCGACA 60.179 55.000 0.00 0.00 38.18 4.35
106 107 0.512085 CTATCTCCGTCTACGCCGAC 59.488 60.000 0.00 0.00 38.18 4.79
107 108 1.226686 GCTATCTCCGTCTACGCCGA 61.227 60.000 0.00 0.00 38.18 5.54
108 109 1.207085 GCTATCTCCGTCTACGCCG 59.793 63.158 0.00 0.00 38.18 6.46
109 110 1.580437 GGCTATCTCCGTCTACGCC 59.420 63.158 0.00 0.00 38.18 5.68
110 111 1.580437 GGGCTATCTCCGTCTACGC 59.420 63.158 0.00 0.00 38.18 4.42
111 112 0.602106 TCGGGCTATCTCCGTCTACG 60.602 60.000 2.42 0.00 46.82 3.51
112 113 0.873721 GTCGGGCTATCTCCGTCTAC 59.126 60.000 2.42 0.00 46.82 2.59
113 114 0.602106 CGTCGGGCTATCTCCGTCTA 60.602 60.000 2.42 0.00 46.82 2.59
114 115 1.892862 CGTCGGGCTATCTCCGTCT 60.893 63.158 2.42 0.00 46.82 4.18
115 116 2.638154 CGTCGGGCTATCTCCGTC 59.362 66.667 2.42 0.00 46.82 4.79
116 117 2.905880 CCGTCGGGCTATCTCCGT 60.906 66.667 2.34 0.00 46.82 4.69
126 127 2.888534 CGTACAATGGCCGTCGGG 60.889 66.667 14.38 0.00 0.00 5.14
127 128 3.560278 GCGTACAATGGCCGTCGG 61.560 66.667 6.99 6.99 0.00 4.79
128 129 3.560278 GGCGTACAATGGCCGTCG 61.560 66.667 0.00 0.00 39.93 5.12
132 133 3.560278 CGTCGGCGTACAATGGCC 61.560 66.667 6.85 0.00 45.95 5.36
133 134 3.560278 CCGTCGGCGTACAATGGC 61.560 66.667 9.28 0.00 36.15 4.40
134 135 3.560278 GCCGTCGGCGTACAATGG 61.560 66.667 22.50 3.16 39.62 3.16
144 145 3.528370 CTAGGTCCTGGCCGTCGG 61.528 72.222 6.99 6.99 0.00 4.79
145 146 4.208686 GCTAGGTCCTGGCCGTCG 62.209 72.222 16.23 0.00 31.69 5.12
146 147 2.760385 AGCTAGGTCCTGGCCGTC 60.760 66.667 22.70 0.00 38.77 4.79
147 148 3.077556 CAGCTAGGTCCTGGCCGT 61.078 66.667 22.70 3.28 38.77 5.68
148 149 3.077556 ACAGCTAGGTCCTGGCCG 61.078 66.667 22.70 15.84 38.77 6.13
149 150 2.904131 GACAGCTAGGTCCTGGCC 59.096 66.667 22.70 4.96 38.77 5.36
150 151 2.496817 CGACAGCTAGGTCCTGGC 59.503 66.667 19.20 19.20 38.26 4.85
151 152 3.082579 GCCGACAGCTAGGTCCTGG 62.083 68.421 0.00 0.00 38.99 4.45
152 153 1.680522 ATGCCGACAGCTAGGTCCTG 61.681 60.000 0.00 0.00 44.23 3.86
153 154 0.106167 TATGCCGACAGCTAGGTCCT 60.106 55.000 0.00 0.00 44.23 3.85
154 155 0.315568 CTATGCCGACAGCTAGGTCC 59.684 60.000 0.00 0.00 44.23 4.46
155 156 0.319125 GCTATGCCGACAGCTAGGTC 60.319 60.000 0.00 0.00 44.23 3.85
156 157 0.757188 AGCTATGCCGACAGCTAGGT 60.757 55.000 0.00 0.00 46.14 3.08
157 158 2.045280 AGCTATGCCGACAGCTAGG 58.955 57.895 0.00 0.00 46.14 3.02
161 162 2.427540 ATCCGAGCTATGCCGACAGC 62.428 60.000 0.00 0.00 44.14 4.40
162 163 0.032678 AATCCGAGCTATGCCGACAG 59.967 55.000 0.00 0.00 0.00 3.51
163 164 1.269723 CTAATCCGAGCTATGCCGACA 59.730 52.381 0.00 0.00 0.00 4.35
164 165 1.402984 CCTAATCCGAGCTATGCCGAC 60.403 57.143 0.00 0.00 0.00 4.79
165 166 0.888619 CCTAATCCGAGCTATGCCGA 59.111 55.000 0.00 0.00 0.00 5.54
166 167 0.737715 GCCTAATCCGAGCTATGCCG 60.738 60.000 0.00 0.00 0.00 5.69
167 168 0.391793 GGCCTAATCCGAGCTATGCC 60.392 60.000 0.00 0.00 0.00 4.40
168 169 3.145228 GGCCTAATCCGAGCTATGC 57.855 57.895 0.00 0.00 0.00 3.14
177 178 3.937447 CCCCCGTCGGCCTAATCC 61.937 72.222 5.50 0.00 0.00 3.01
178 179 4.620937 GCCCCCGTCGGCCTAATC 62.621 72.222 5.50 0.00 43.66 1.75
195 196 1.095228 AGCCAAATGTATGCCGACGG 61.095 55.000 10.29 10.29 0.00 4.79
196 197 0.027979 CAGCCAAATGTATGCCGACG 59.972 55.000 0.00 0.00 0.00 5.12
197 198 1.064060 GACAGCCAAATGTATGCCGAC 59.936 52.381 0.00 0.00 32.25 4.79
198 199 1.378531 GACAGCCAAATGTATGCCGA 58.621 50.000 0.00 0.00 32.25 5.54
199 200 0.027979 CGACAGCCAAATGTATGCCG 59.972 55.000 0.00 0.00 32.25 5.69
200 201 0.381801 CCGACAGCCAAATGTATGCC 59.618 55.000 0.00 0.00 32.25 4.40
201 202 0.248621 GCCGACAGCCAAATGTATGC 60.249 55.000 0.00 0.00 32.25 3.14
202 203 1.382522 AGCCGACAGCCAAATGTATG 58.617 50.000 0.00 0.00 45.47 2.39
203 204 2.128771 AAGCCGACAGCCAAATGTAT 57.871 45.000 0.00 0.00 45.47 2.29
204 205 2.235155 TCTAAGCCGACAGCCAAATGTA 59.765 45.455 0.00 0.00 45.47 2.29
205 206 1.003118 TCTAAGCCGACAGCCAAATGT 59.997 47.619 0.00 0.00 45.47 2.71
206 207 1.667724 CTCTAAGCCGACAGCCAAATG 59.332 52.381 0.00 0.00 45.47 2.32
207 208 2.014068 GCTCTAAGCCGACAGCCAAAT 61.014 52.381 0.00 0.00 45.47 2.32
208 209 0.673644 GCTCTAAGCCGACAGCCAAA 60.674 55.000 0.00 0.00 45.47 3.28
209 210 1.079127 GCTCTAAGCCGACAGCCAA 60.079 57.895 0.00 0.00 45.47 4.52
210 211 2.579201 GCTCTAAGCCGACAGCCA 59.421 61.111 0.00 0.00 45.47 4.75
219 220 1.153349 CCGGAACAGGGCTCTAAGC 60.153 63.158 0.00 0.00 41.46 3.09
220 221 1.409427 CTACCGGAACAGGGCTCTAAG 59.591 57.143 9.46 0.00 35.02 2.18
221 222 1.272872 ACTACCGGAACAGGGCTCTAA 60.273 52.381 9.46 0.00 35.02 2.10
222 223 0.333993 ACTACCGGAACAGGGCTCTA 59.666 55.000 9.46 0.00 35.02 2.43
223 224 1.078710 ACTACCGGAACAGGGCTCT 59.921 57.895 9.46 0.00 35.02 4.09
224 225 1.218316 CACTACCGGAACAGGGCTC 59.782 63.158 9.46 0.00 35.02 4.70
225 226 2.955881 GCACTACCGGAACAGGGCT 61.956 63.158 9.46 0.00 38.21 5.19
226 227 2.436115 GCACTACCGGAACAGGGC 60.436 66.667 9.46 11.52 33.29 5.19
227 228 0.035439 AATGCACTACCGGAACAGGG 60.035 55.000 9.46 4.14 35.02 4.45
228 229 1.369625 GAATGCACTACCGGAACAGG 58.630 55.000 9.46 0.00 37.30 4.00
229 230 0.999406 CGAATGCACTACCGGAACAG 59.001 55.000 9.46 4.49 0.00 3.16
230 231 0.319083 ACGAATGCACTACCGGAACA 59.681 50.000 9.46 0.00 0.00 3.18
231 232 0.719465 CACGAATGCACTACCGGAAC 59.281 55.000 9.46 0.00 0.00 3.62
232 233 0.604073 TCACGAATGCACTACCGGAA 59.396 50.000 9.46 0.00 0.00 4.30
233 234 0.821517 ATCACGAATGCACTACCGGA 59.178 50.000 9.46 0.00 0.00 5.14
234 235 1.202417 AGATCACGAATGCACTACCGG 60.202 52.381 0.00 0.00 0.00 5.28
235 236 1.854743 CAGATCACGAATGCACTACCG 59.145 52.381 0.00 0.00 0.00 4.02
236 237 2.205074 CCAGATCACGAATGCACTACC 58.795 52.381 0.00 0.00 0.00 3.18
237 238 1.594862 GCCAGATCACGAATGCACTAC 59.405 52.381 0.00 0.00 0.00 2.73
238 239 1.473257 GGCCAGATCACGAATGCACTA 60.473 52.381 0.00 0.00 0.00 2.74
239 240 0.745845 GGCCAGATCACGAATGCACT 60.746 55.000 0.00 0.00 0.00 4.40
240 241 1.723870 GGCCAGATCACGAATGCAC 59.276 57.895 0.00 0.00 0.00 4.57
241 242 1.815003 CGGCCAGATCACGAATGCA 60.815 57.895 2.24 0.00 0.00 3.96
242 243 2.537560 CCGGCCAGATCACGAATGC 61.538 63.158 2.24 0.00 0.00 3.56
285 286 0.391263 GGGGGAGTAGAAAGCACACG 60.391 60.000 0.00 0.00 0.00 4.49
298 301 4.788679 ACAAATATTTAGGAACGGGGGAG 58.211 43.478 0.00 0.00 0.00 4.30
299 302 4.475747 AGACAAATATTTAGGAACGGGGGA 59.524 41.667 0.00 0.00 0.00 4.81
300 303 4.788679 AGACAAATATTTAGGAACGGGGG 58.211 43.478 0.00 0.00 0.00 5.40
301 304 6.602009 AGAAAGACAAATATTTAGGAACGGGG 59.398 38.462 0.00 0.00 0.00 5.73
302 305 7.625828 AGAAAGACAAATATTTAGGAACGGG 57.374 36.000 0.00 0.00 0.00 5.28
303 306 9.595823 TCTAGAAAGACAAATATTTAGGAACGG 57.404 33.333 0.00 0.00 0.00 4.44
320 323 7.336931 GGTAGCCATTTGAAATGTCTAGAAAGA 59.663 37.037 15.93 0.00 0.00 2.52
321 324 7.121168 TGGTAGCCATTTGAAATGTCTAGAAAG 59.879 37.037 15.93 0.50 0.00 2.62
322 325 6.945435 TGGTAGCCATTTGAAATGTCTAGAAA 59.055 34.615 15.93 0.00 0.00 2.52
323 326 6.374333 GTGGTAGCCATTTGAAATGTCTAGAA 59.626 38.462 15.93 2.55 35.28 2.10
324 327 5.880332 GTGGTAGCCATTTGAAATGTCTAGA 59.120 40.000 15.93 1.26 35.28 2.43
325 328 5.647658 TGTGGTAGCCATTTGAAATGTCTAG 59.352 40.000 15.93 2.82 35.28 2.43
326 329 5.565509 TGTGGTAGCCATTTGAAATGTCTA 58.434 37.500 15.93 10.48 35.28 2.59
327 330 4.406456 TGTGGTAGCCATTTGAAATGTCT 58.594 39.130 15.93 11.47 35.28 3.41
328 331 4.782019 TGTGGTAGCCATTTGAAATGTC 57.218 40.909 15.93 3.96 35.28 3.06
329 332 5.163663 CGTATGTGGTAGCCATTTGAAATGT 60.164 40.000 15.93 2.12 35.28 2.71
330 333 5.273170 CGTATGTGGTAGCCATTTGAAATG 58.727 41.667 10.84 10.84 35.28 2.32
331 334 4.338118 CCGTATGTGGTAGCCATTTGAAAT 59.662 41.667 2.01 0.00 35.28 2.17
332 335 3.692101 CCGTATGTGGTAGCCATTTGAAA 59.308 43.478 2.01 0.00 35.28 2.69
333 336 3.055021 TCCGTATGTGGTAGCCATTTGAA 60.055 43.478 2.01 0.00 35.28 2.69
334 337 2.502130 TCCGTATGTGGTAGCCATTTGA 59.498 45.455 2.01 0.00 35.28 2.69
335 338 2.912771 TCCGTATGTGGTAGCCATTTG 58.087 47.619 2.01 0.00 35.28 2.32
336 339 3.118038 ACATCCGTATGTGGTAGCCATTT 60.118 43.478 0.00 0.00 44.79 2.32
337 340 2.438021 ACATCCGTATGTGGTAGCCATT 59.562 45.455 0.00 0.00 44.79 3.16
338 341 2.047061 ACATCCGTATGTGGTAGCCAT 58.953 47.619 0.00 0.00 44.79 4.40
339 342 1.491668 ACATCCGTATGTGGTAGCCA 58.508 50.000 0.00 0.00 44.79 4.75
340 343 3.585862 CATACATCCGTATGTGGTAGCC 58.414 50.000 3.56 0.00 46.70 3.93
374 377 9.771534 GGAGCAAAATAAGTGAATCTATACTCT 57.228 33.333 0.00 0.00 0.00 3.24
375 378 8.704234 CGGAGCAAAATAAGTGAATCTATACTC 58.296 37.037 0.00 0.00 0.00 2.59
376 379 8.204836 ACGGAGCAAAATAAGTGAATCTATACT 58.795 33.333 0.00 0.00 0.00 2.12
377 380 8.366671 ACGGAGCAAAATAAGTGAATCTATAC 57.633 34.615 0.00 0.00 0.00 1.47
379 382 8.993121 CATACGGAGCAAAATAAGTGAATCTAT 58.007 33.333 0.00 0.00 0.00 1.98
380 383 7.985184 ACATACGGAGCAAAATAAGTGAATCTA 59.015 33.333 0.00 0.00 0.00 1.98
381 384 6.823689 ACATACGGAGCAAAATAAGTGAATCT 59.176 34.615 0.00 0.00 0.00 2.40
382 385 7.016361 ACATACGGAGCAAAATAAGTGAATC 57.984 36.000 0.00 0.00 0.00 2.52
383 386 7.769044 ACTACATACGGAGCAAAATAAGTGAAT 59.231 33.333 0.00 0.00 0.00 2.57
384 387 7.101054 ACTACATACGGAGCAAAATAAGTGAA 58.899 34.615 0.00 0.00 0.00 3.18
385 388 6.636705 ACTACATACGGAGCAAAATAAGTGA 58.363 36.000 0.00 0.00 0.00 3.41
386 389 6.533723 TGACTACATACGGAGCAAAATAAGTG 59.466 38.462 0.00 0.00 0.00 3.16
387 390 6.534079 GTGACTACATACGGAGCAAAATAAGT 59.466 38.462 0.00 0.00 0.00 2.24
388 391 6.757010 AGTGACTACATACGGAGCAAAATAAG 59.243 38.462 0.00 0.00 0.00 1.73
389 392 6.636705 AGTGACTACATACGGAGCAAAATAA 58.363 36.000 0.00 0.00 0.00 1.40
390 393 6.216801 AGTGACTACATACGGAGCAAAATA 57.783 37.500 0.00 0.00 0.00 1.40
391 394 5.086104 AGTGACTACATACGGAGCAAAAT 57.914 39.130 0.00 0.00 0.00 1.82
392 395 4.530710 AGTGACTACATACGGAGCAAAA 57.469 40.909 0.00 0.00 0.00 2.44
393 396 4.530710 AAGTGACTACATACGGAGCAAA 57.469 40.909 0.00 0.00 0.00 3.68
394 397 4.703575 AGTAAGTGACTACATACGGAGCAA 59.296 41.667 0.00 0.00 36.41 3.91
395 398 4.095932 CAGTAAGTGACTACATACGGAGCA 59.904 45.833 0.00 0.00 36.41 4.26
396 399 4.334759 TCAGTAAGTGACTACATACGGAGC 59.665 45.833 0.00 0.00 36.41 4.70
397 400 6.432607 TTCAGTAAGTGACTACATACGGAG 57.567 41.667 0.00 0.00 36.84 4.63
398 401 6.822667 TTTCAGTAAGTGACTACATACGGA 57.177 37.500 0.00 0.00 36.41 4.69
399 402 9.395707 GATATTTCAGTAAGTGACTACATACGG 57.604 37.037 0.00 0.00 36.41 4.02
428 431 9.971922 CCATCCATTCCTAAATATTTGTCTTTC 57.028 33.333 11.05 0.00 0.00 2.62
429 432 9.713684 TCCATCCATTCCTAAATATTTGTCTTT 57.286 29.630 11.05 0.00 0.00 2.52
430 433 9.359653 CTCCATCCATTCCTAAATATTTGTCTT 57.640 33.333 11.05 0.00 0.00 3.01
431 434 8.506083 ACTCCATCCATTCCTAAATATTTGTCT 58.494 33.333 11.05 0.00 0.00 3.41
432 435 8.697507 ACTCCATCCATTCCTAAATATTTGTC 57.302 34.615 11.05 0.00 0.00 3.18
438 441 8.049117 GCATGATACTCCATCCATTCCTAAATA 58.951 37.037 0.00 0.00 32.09 1.40
439 442 6.888632 GCATGATACTCCATCCATTCCTAAAT 59.111 38.462 0.00 0.00 32.09 1.40
440 443 6.183361 TGCATGATACTCCATCCATTCCTAAA 60.183 38.462 0.00 0.00 32.09 1.85
441 444 5.310331 TGCATGATACTCCATCCATTCCTAA 59.690 40.000 0.00 0.00 32.09 2.69
442 445 4.845796 TGCATGATACTCCATCCATTCCTA 59.154 41.667 0.00 0.00 32.09 2.94
443 446 3.654321 TGCATGATACTCCATCCATTCCT 59.346 43.478 0.00 0.00 32.09 3.36
444 447 4.025040 TGCATGATACTCCATCCATTCC 57.975 45.455 0.00 0.00 32.09 3.01
445 448 5.621555 GCAATGCATGATACTCCATCCATTC 60.622 44.000 0.00 0.00 32.09 2.67
446 449 4.219944 GCAATGCATGATACTCCATCCATT 59.780 41.667 0.00 0.00 32.09 3.16
447 450 3.762288 GCAATGCATGATACTCCATCCAT 59.238 43.478 0.00 0.00 32.09 3.41
448 451 3.151554 GCAATGCATGATACTCCATCCA 58.848 45.455 0.00 0.00 32.09 3.41
449 452 3.151554 TGCAATGCATGATACTCCATCC 58.848 45.455 2.72 0.00 31.71 3.51
461 464 9.226493 CTCAAGAGAAGAGAACATGCAATGCAT 62.226 40.741 15.88 15.88 40.97 3.96
462 465 8.003046 CTCAAGAGAAGAGAACATGCAATGCA 62.003 42.308 11.44 11.44 40.97 3.96
463 466 5.674068 CTCAAGAGAAGAGAACATGCAATGC 60.674 44.000 0.00 0.00 40.97 3.56
464 467 5.411977 ACTCAAGAGAAGAGAACATGCAATG 59.588 40.000 3.73 0.00 42.41 2.82
465 468 5.411977 CACTCAAGAGAAGAGAACATGCAAT 59.588 40.000 3.73 0.00 36.91 3.56
466 469 4.753610 CACTCAAGAGAAGAGAACATGCAA 59.246 41.667 3.73 0.00 36.91 4.08
486 489 7.489435 CACTATTACGTTCTCATCAATCACACT 59.511 37.037 0.00 0.00 0.00 3.55
494 497 3.702330 CGCCACTATTACGTTCTCATCA 58.298 45.455 0.00 0.00 0.00 3.07
495 498 2.471743 GCGCCACTATTACGTTCTCATC 59.528 50.000 0.00 0.00 0.00 2.92
496 499 2.470821 GCGCCACTATTACGTTCTCAT 58.529 47.619 0.00 0.00 0.00 2.90
497 500 1.796253 CGCGCCACTATTACGTTCTCA 60.796 52.381 0.00 0.00 0.00 3.27
508 511 2.202743 GATGCTCACGCGCCACTA 60.203 61.111 5.73 0.00 39.65 2.74
573 2036 6.574093 CGTTAGCACTATCTGTATCACGTTAG 59.426 42.308 0.00 0.00 0.00 2.34
575 2038 5.065602 TCGTTAGCACTATCTGTATCACGTT 59.934 40.000 0.00 0.00 0.00 3.99
581 2044 5.469084 TCGTCATCGTTAGCACTATCTGTAT 59.531 40.000 0.00 0.00 38.33 2.29
582 2045 4.812626 TCGTCATCGTTAGCACTATCTGTA 59.187 41.667 0.00 0.00 38.33 2.74
583 2046 3.626217 TCGTCATCGTTAGCACTATCTGT 59.374 43.478 0.00 0.00 38.33 3.41
584 2047 3.969352 GTCGTCATCGTTAGCACTATCTG 59.031 47.826 0.00 0.00 38.33 2.90
600 2063 5.587289 TGTGATAAATCATGATCGTCGTCA 58.413 37.500 9.06 6.86 39.30 4.35
601 2064 6.510746 TTGTGATAAATCATGATCGTCGTC 57.489 37.500 9.06 4.42 39.30 4.20
604 2067 8.820933 TCTCTTTTGTGATAAATCATGATCGTC 58.179 33.333 9.06 8.14 39.30 4.20
605 2068 8.722480 TCTCTTTTGTGATAAATCATGATCGT 57.278 30.769 9.06 2.84 39.30 3.73
674 2141 0.464452 GTGGTAGATTAGCTGGCCGT 59.536 55.000 0.00 0.00 0.00 5.68
778 2259 2.845752 TTCCGGGATTTCGCAGGTCG 62.846 60.000 0.00 0.00 40.15 4.79
966 2490 1.074926 GGATGGAGGAGGCCTGAGA 60.075 63.158 12.00 0.00 31.76 3.27
967 2491 1.383664 TGGATGGAGGAGGCCTGAG 60.384 63.158 12.00 0.00 31.76 3.35
968 2492 1.383664 CTGGATGGAGGAGGCCTGA 60.384 63.158 12.00 0.00 31.76 3.86
969 2493 3.117452 GCTGGATGGAGGAGGCCTG 62.117 68.421 12.00 0.00 31.76 4.85
970 2494 2.771762 GCTGGATGGAGGAGGCCT 60.772 66.667 3.86 3.86 36.03 5.19
971 2495 3.883549 GGCTGGATGGAGGAGGCC 61.884 72.222 0.00 0.00 0.00 5.19
972 2496 2.004408 AATGGCTGGATGGAGGAGGC 62.004 60.000 0.00 0.00 0.00 4.70
976 2501 1.831286 GGCAATGGCTGGATGGAGG 60.831 63.158 0.00 0.00 40.87 4.30
1025 2590 4.078336 AGGAGGTGGAGATATGGAGAGAAA 60.078 45.833 0.00 0.00 0.00 2.52
1035 2600 1.860240 AGCTGGTAGGAGGTGGAGATA 59.140 52.381 0.00 0.00 0.00 1.98
1077 3321 4.864334 CGTCCATGGAGGCTGCCC 62.864 72.222 20.81 6.85 37.29 5.36
1314 4366 4.717629 CTGCTTCCGTGCCGTCGA 62.718 66.667 0.00 0.00 0.00 4.20
1528 4649 2.705127 AGTTTCCCCGGCCGTATAATAA 59.295 45.455 26.12 7.46 0.00 1.40
1529 4650 2.328319 AGTTTCCCCGGCCGTATAATA 58.672 47.619 26.12 1.27 0.00 0.98
1530 4651 1.134228 AGTTTCCCCGGCCGTATAAT 58.866 50.000 26.12 0.40 0.00 1.28
1549 4670 8.450558 TTGTATTGCAACTCCTCGGTACGTAA 62.451 42.308 0.00 0.00 42.39 3.18
1565 4687 8.907222 ATGTATCAGTACATGATTGTATTGCA 57.093 30.769 0.00 0.00 46.97 4.08
1584 4714 9.149225 GGACTGATTGATTCTCATACATGTATC 57.851 37.037 15.60 6.26 0.00 2.24
1620 4765 5.741964 GCATTGCAATGAGAATGGATGGAAT 60.742 40.000 37.36 0.00 38.70 3.01
1701 4877 8.682936 AACTTTGTTCATTCACAGTTCTATCT 57.317 30.769 0.00 0.00 34.56 1.98
1704 4880 9.168451 TGTAAACTTTGTTCATTCACAGTTCTA 57.832 29.630 0.00 0.00 37.35 2.10
1706 4882 8.856490 ATGTAAACTTTGTTCATTCACAGTTC 57.144 30.769 0.00 0.00 37.35 3.01
1707 4883 9.651913 AAATGTAAACTTTGTTCATTCACAGTT 57.348 25.926 0.00 0.00 39.15 3.16
1708 4884 9.086336 CAAATGTAAACTTTGTTCATTCACAGT 57.914 29.630 0.00 0.00 30.91 3.55
1709 4885 8.542132 CCAAATGTAAACTTTGTTCATTCACAG 58.458 33.333 0.00 0.00 32.83 3.66
1710 4886 7.010923 GCCAAATGTAAACTTTGTTCATTCACA 59.989 33.333 0.00 0.00 32.83 3.58
1711 4887 7.224557 AGCCAAATGTAAACTTTGTTCATTCAC 59.775 33.333 0.00 0.00 32.83 3.18
1712 4888 7.271511 AGCCAAATGTAAACTTTGTTCATTCA 58.728 30.769 0.00 0.00 32.83 2.57
1713 4889 7.713764 AGCCAAATGTAAACTTTGTTCATTC 57.286 32.000 0.00 0.00 32.83 2.67
1714 4890 7.768120 TCAAGCCAAATGTAAACTTTGTTCATT 59.232 29.630 0.00 0.00 32.83 2.57
1715 4891 7.271511 TCAAGCCAAATGTAAACTTTGTTCAT 58.728 30.769 0.00 0.00 32.83 2.57
1721 4897 5.990996 CACCATCAAGCCAAATGTAAACTTT 59.009 36.000 0.00 0.00 0.00 2.66
1730 4910 1.269012 CCCACACCATCAAGCCAAAT 58.731 50.000 0.00 0.00 0.00 2.32
1740 4923 0.114954 ATTCCTTGCACCCACACCAT 59.885 50.000 0.00 0.00 0.00 3.55
1752 4937 1.667724 GTGACGGCAGATGATTCCTTG 59.332 52.381 0.00 0.00 0.00 3.61
1753 4938 1.407437 GGTGACGGCAGATGATTCCTT 60.407 52.381 0.00 0.00 0.00 3.36
1754 4939 0.179000 GGTGACGGCAGATGATTCCT 59.821 55.000 0.00 0.00 0.00 3.36
1884 5107 2.415168 CAGATTCGTTTGGCGTGTGTAT 59.585 45.455 0.00 0.00 42.13 2.29
1885 5108 1.795872 CAGATTCGTTTGGCGTGTGTA 59.204 47.619 0.00 0.00 42.13 2.90
1973 5201 3.885297 CTGAAAGAAAGGGAAGTGCAGAA 59.115 43.478 0.00 0.00 34.07 3.02
2001 5231 1.971505 CTGCGTCTGATTGGCCCCTA 61.972 60.000 0.00 0.00 0.00 3.53
2007 5238 2.414481 CAGAAACTCTGCGTCTGATTGG 59.586 50.000 0.00 0.00 41.08 3.16
2008 5239 3.719083 CAGAAACTCTGCGTCTGATTG 57.281 47.619 0.00 0.00 41.08 2.67
2018 5249 2.357792 CTCGCGAGCAGAAACTCTG 58.642 57.895 25.07 0.00 46.90 3.35
2019 5250 4.878774 CTCGCGAGCAGAAACTCT 57.121 55.556 25.07 0.00 34.35 3.24
2037 5268 1.734465 GTTCACCCGAGCTCAAATGAG 59.266 52.381 15.40 6.05 44.75 2.90
2038 5269 1.071542 TGTTCACCCGAGCTCAAATGA 59.928 47.619 15.40 10.42 0.00 2.57
2039 5270 1.522668 TGTTCACCCGAGCTCAAATG 58.477 50.000 15.40 8.10 0.00 2.32
2040 5271 2.270352 TTGTTCACCCGAGCTCAAAT 57.730 45.000 15.40 0.00 0.00 2.32
2041 5272 2.270352 ATTGTTCACCCGAGCTCAAA 57.730 45.000 15.40 0.00 0.00 2.69
2042 5273 3.410631 TTATTGTTCACCCGAGCTCAA 57.589 42.857 15.40 0.00 0.00 3.02
2043 5274 3.410631 TTTATTGTTCACCCGAGCTCA 57.589 42.857 15.40 0.00 0.00 4.26
2044 5275 4.494199 CGATTTTATTGTTCACCCGAGCTC 60.494 45.833 2.73 2.73 0.00 4.09
2045 5276 3.374058 CGATTTTATTGTTCACCCGAGCT 59.626 43.478 0.00 0.00 0.00 4.09
2046 5277 3.372822 TCGATTTTATTGTTCACCCGAGC 59.627 43.478 0.00 0.00 0.00 5.03
2047 5278 5.539582 TTCGATTTTATTGTTCACCCGAG 57.460 39.130 0.00 0.00 0.00 4.63
2048 5279 5.943706 TTTCGATTTTATTGTTCACCCGA 57.056 34.783 0.00 0.00 0.00 5.14
2049 5280 6.994868 TTTTTCGATTTTATTGTTCACCCG 57.005 33.333 0.00 0.00 0.00 5.28
2079 5310 6.597832 TTGTCAAAGTTTCTCCTCCAAAAA 57.402 33.333 0.00 0.00 0.00 1.94
2080 5311 6.597832 TTTGTCAAAGTTTCTCCTCCAAAA 57.402 33.333 0.00 0.00 0.00 2.44
2081 5312 6.597832 TTTTGTCAAAGTTTCTCCTCCAAA 57.402 33.333 0.00 0.00 0.00 3.28
2082 5313 6.207691 CTTTTGTCAAAGTTTCTCCTCCAA 57.792 37.500 0.00 0.00 35.53 3.53
2083 5314 5.835113 CTTTTGTCAAAGTTTCTCCTCCA 57.165 39.130 0.00 0.00 35.53 3.86
2094 5325 6.527957 CAAGCACTTCAAACTTTTGTCAAAG 58.472 36.000 0.00 1.83 44.57 2.77
2095 5326 5.107143 GCAAGCACTTCAAACTTTTGTCAAA 60.107 36.000 0.00 0.00 39.18 2.69
2096 5327 4.388469 GCAAGCACTTCAAACTTTTGTCAA 59.612 37.500 1.75 0.00 39.18 3.18
2097 5328 3.925913 GCAAGCACTTCAAACTTTTGTCA 59.074 39.130 1.75 0.00 39.18 3.58
2098 5329 3.925913 TGCAAGCACTTCAAACTTTTGTC 59.074 39.130 1.75 0.00 39.18 3.18
2099 5330 3.924144 TGCAAGCACTTCAAACTTTTGT 58.076 36.364 1.75 0.00 39.18 2.83
2100 5331 4.925061 TTGCAAGCACTTCAAACTTTTG 57.075 36.364 0.00 0.00 39.48 2.44
2101 5332 5.938438 TTTTGCAAGCACTTCAAACTTTT 57.062 30.435 0.00 0.00 30.45 2.27
2102 5333 5.938438 TTTTTGCAAGCACTTCAAACTTT 57.062 30.435 0.00 0.00 30.45 2.66
2103 5334 6.499234 AATTTTTGCAAGCACTTCAAACTT 57.501 29.167 0.00 0.00 30.45 2.66
2104 5335 6.818142 ACTAATTTTTGCAAGCACTTCAAACT 59.182 30.769 0.00 0.00 30.45 2.66
2105 5336 7.003939 ACTAATTTTTGCAAGCACTTCAAAC 57.996 32.000 0.00 0.00 30.45 2.93
2106 5337 7.041107 AGACTAATTTTTGCAAGCACTTCAAA 58.959 30.769 0.00 0.00 0.00 2.69
2107 5338 6.572519 AGACTAATTTTTGCAAGCACTTCAA 58.427 32.000 0.00 0.00 0.00 2.69
2108 5339 6.147864 AGACTAATTTTTGCAAGCACTTCA 57.852 33.333 0.00 0.00 0.00 3.02
2109 5340 6.697019 TCAAGACTAATTTTTGCAAGCACTTC 59.303 34.615 0.00 0.00 0.00 3.01
2110 5341 6.572519 TCAAGACTAATTTTTGCAAGCACTT 58.427 32.000 0.00 0.00 0.00 3.16
2111 5342 6.147864 TCAAGACTAATTTTTGCAAGCACT 57.852 33.333 0.00 0.00 0.00 4.40
2112 5343 6.826893 TTCAAGACTAATTTTTGCAAGCAC 57.173 33.333 0.00 0.00 0.00 4.40
2113 5344 7.710044 TGATTTCAAGACTAATTTTTGCAAGCA 59.290 29.630 0.00 0.00 0.00 3.91
2114 5345 8.075593 TGATTTCAAGACTAATTTTTGCAAGC 57.924 30.769 0.00 0.00 0.00 4.01
2127 5358 7.936301 GCCTTCTAGGAATATGATTTCAAGACT 59.064 37.037 0.00 0.00 37.67 3.24
2128 5359 7.095439 CGCCTTCTAGGAATATGATTTCAAGAC 60.095 40.741 0.00 0.00 37.67 3.01
2129 5360 6.931281 CGCCTTCTAGGAATATGATTTCAAGA 59.069 38.462 0.00 0.00 37.67 3.02
2130 5361 6.708054 ACGCCTTCTAGGAATATGATTTCAAG 59.292 38.462 0.00 0.00 37.67 3.02
2131 5362 6.483307 CACGCCTTCTAGGAATATGATTTCAA 59.517 38.462 0.00 0.00 37.67 2.69
2132 5363 5.991606 CACGCCTTCTAGGAATATGATTTCA 59.008 40.000 0.00 0.00 37.67 2.69
2133 5364 5.409826 CCACGCCTTCTAGGAATATGATTTC 59.590 44.000 0.00 0.00 37.67 2.17
2134 5365 5.308825 CCACGCCTTCTAGGAATATGATTT 58.691 41.667 0.00 0.00 37.67 2.17
2135 5366 4.804261 GCCACGCCTTCTAGGAATATGATT 60.804 45.833 0.00 0.00 37.67 2.57
2136 5367 3.307059 GCCACGCCTTCTAGGAATATGAT 60.307 47.826 0.00 0.00 37.67 2.45
2137 5368 2.037251 GCCACGCCTTCTAGGAATATGA 59.963 50.000 0.00 0.00 37.67 2.15
2138 5369 2.224281 TGCCACGCCTTCTAGGAATATG 60.224 50.000 0.00 0.00 37.67 1.78
2139 5370 2.047061 TGCCACGCCTTCTAGGAATAT 58.953 47.619 0.00 0.00 37.67 1.28
2140 5371 1.491668 TGCCACGCCTTCTAGGAATA 58.508 50.000 0.00 0.00 37.67 1.75
2141 5372 0.618458 TTGCCACGCCTTCTAGGAAT 59.382 50.000 0.00 0.00 37.67 3.01
2142 5373 0.398696 TTTGCCACGCCTTCTAGGAA 59.601 50.000 0.00 0.00 37.67 3.36
2143 5374 0.398696 TTTTGCCACGCCTTCTAGGA 59.601 50.000 0.00 0.00 37.67 2.94
2144 5375 1.243902 TTTTTGCCACGCCTTCTAGG 58.756 50.000 0.00 0.00 38.80 3.02
2161 5392 5.562890 GCATTTTCAGAGTAGCGGTCTTTTT 60.563 40.000 0.00 0.00 0.00 1.94
2162 5393 4.083271 GCATTTTCAGAGTAGCGGTCTTTT 60.083 41.667 0.00 0.00 0.00 2.27
2163 5394 3.437049 GCATTTTCAGAGTAGCGGTCTTT 59.563 43.478 0.00 0.00 0.00 2.52
2164 5395 3.003480 GCATTTTCAGAGTAGCGGTCTT 58.997 45.455 0.00 0.00 0.00 3.01
2165 5396 2.234908 AGCATTTTCAGAGTAGCGGTCT 59.765 45.455 0.00 0.00 0.00 3.85
2166 5397 2.622436 AGCATTTTCAGAGTAGCGGTC 58.378 47.619 0.00 0.00 0.00 4.79
2167 5398 2.770164 AGCATTTTCAGAGTAGCGGT 57.230 45.000 0.00 0.00 0.00 5.68
2168 5399 3.786635 AGTAGCATTTTCAGAGTAGCGG 58.213 45.455 0.00 0.00 0.00 5.52
2169 5400 5.499334 CGAAAGTAGCATTTTCAGAGTAGCG 60.499 44.000 7.90 0.00 34.90 4.26
2170 5401 5.577164 TCGAAAGTAGCATTTTCAGAGTAGC 59.423 40.000 7.90 0.00 34.90 3.58
2171 5402 7.582435 TTCGAAAGTAGCATTTTCAGAGTAG 57.418 36.000 0.00 0.00 34.90 2.57
2172 5403 7.360101 GCTTTCGAAAGTAGCATTTTCAGAGTA 60.360 37.037 32.32 0.00 38.84 2.59
2173 5404 6.566753 GCTTTCGAAAGTAGCATTTTCAGAGT 60.567 38.462 32.32 0.00 38.84 3.24
2174 5405 5.792468 GCTTTCGAAAGTAGCATTTTCAGAG 59.208 40.000 32.32 8.58 38.84 3.35
2175 5406 5.238432 TGCTTTCGAAAGTAGCATTTTCAGA 59.762 36.000 32.32 4.54 41.95 3.27
2176 5407 5.451908 TGCTTTCGAAAGTAGCATTTTCAG 58.548 37.500 32.32 9.60 41.95 3.02
2177 5408 5.431420 TGCTTTCGAAAGTAGCATTTTCA 57.569 34.783 32.32 18.70 41.95 2.69
2184 5415 4.794169 TCCAAAATGCTTTCGAAAGTAGC 58.206 39.130 32.32 22.84 38.28 3.58
2185 5416 4.853743 GCTCCAAAATGCTTTCGAAAGTAG 59.146 41.667 32.32 19.05 38.28 2.57
2186 5417 4.277174 TGCTCCAAAATGCTTTCGAAAGTA 59.723 37.500 32.32 29.87 38.28 2.24
2187 5418 3.068024 TGCTCCAAAATGCTTTCGAAAGT 59.932 39.130 32.32 15.99 38.28 2.66
2188 5419 3.426525 GTGCTCCAAAATGCTTTCGAAAG 59.573 43.478 29.45 29.45 39.03 2.62
2189 5420 3.068024 AGTGCTCCAAAATGCTTTCGAAA 59.932 39.130 10.71 10.71 0.00 3.46
2190 5421 2.622942 AGTGCTCCAAAATGCTTTCGAA 59.377 40.909 0.00 0.00 0.00 3.71
2191 5422 2.229792 AGTGCTCCAAAATGCTTTCGA 58.770 42.857 0.00 0.00 0.00 3.71
2192 5423 2.712057 AGTGCTCCAAAATGCTTTCG 57.288 45.000 0.00 0.00 0.00 3.46
2193 5424 7.041848 ACAAATTAAGTGCTCCAAAATGCTTTC 60.042 33.333 0.00 0.00 0.00 2.62
2194 5425 6.767423 ACAAATTAAGTGCTCCAAAATGCTTT 59.233 30.769 0.00 0.00 0.00 3.51
2195 5426 6.290605 ACAAATTAAGTGCTCCAAAATGCTT 58.709 32.000 0.00 0.00 0.00 3.91
2196 5427 5.857268 ACAAATTAAGTGCTCCAAAATGCT 58.143 33.333 0.00 0.00 0.00 3.79
2197 5428 6.544038 AACAAATTAAGTGCTCCAAAATGC 57.456 33.333 0.00 0.00 0.00 3.56
2259 5490 8.816640 ATGTTCTAGGTGCTTACAAAAATTTG 57.183 30.769 4.40 4.40 43.62 2.32
2260 5491 9.830975 AAATGTTCTAGGTGCTTACAAAAATTT 57.169 25.926 0.00 0.00 0.00 1.82
2261 5492 9.260002 CAAATGTTCTAGGTGCTTACAAAAATT 57.740 29.630 0.00 0.00 0.00 1.82
2262 5493 8.421002 ACAAATGTTCTAGGTGCTTACAAAAAT 58.579 29.630 0.00 0.00 0.00 1.82
2263 5494 7.777095 ACAAATGTTCTAGGTGCTTACAAAAA 58.223 30.769 0.00 0.00 0.00 1.94
2264 5495 7.067615 TGACAAATGTTCTAGGTGCTTACAAAA 59.932 33.333 0.00 0.00 0.00 2.44
2265 5496 6.544197 TGACAAATGTTCTAGGTGCTTACAAA 59.456 34.615 0.00 0.00 0.00 2.83
2266 5497 6.058833 TGACAAATGTTCTAGGTGCTTACAA 58.941 36.000 0.00 0.00 0.00 2.41
2267 5498 5.616270 TGACAAATGTTCTAGGTGCTTACA 58.384 37.500 0.00 0.00 0.00 2.41
2268 5499 6.554334 TTGACAAATGTTCTAGGTGCTTAC 57.446 37.500 0.00 0.00 0.00 2.34
2269 5500 7.144722 CATTGACAAATGTTCTAGGTGCTTA 57.855 36.000 0.00 0.00 38.72 3.09
2270 5501 6.017400 CATTGACAAATGTTCTAGGTGCTT 57.983 37.500 0.00 0.00 38.72 3.91
2271 5502 5.633830 CATTGACAAATGTTCTAGGTGCT 57.366 39.130 0.00 0.00 38.72 4.40
2327 5558 9.483062 CAGTAAAATCGAAACAAAATGCAAAAA 57.517 25.926 0.00 0.00 0.00 1.94
2328 5559 8.660373 ACAGTAAAATCGAAACAAAATGCAAAA 58.340 25.926 0.00 0.00 0.00 2.44
2329 5560 8.190888 ACAGTAAAATCGAAACAAAATGCAAA 57.809 26.923 0.00 0.00 0.00 3.68
2330 5561 7.763172 ACAGTAAAATCGAAACAAAATGCAA 57.237 28.000 0.00 0.00 0.00 4.08
2331 5562 7.489435 TGAACAGTAAAATCGAAACAAAATGCA 59.511 29.630 0.00 0.00 0.00 3.96
2332 5563 7.787480 GTGAACAGTAAAATCGAAACAAAATGC 59.213 33.333 0.00 0.00 0.00 3.56
2333 5564 8.265998 GGTGAACAGTAAAATCGAAACAAAATG 58.734 33.333 0.00 0.00 0.00 2.32
2334 5565 7.166804 CGGTGAACAGTAAAATCGAAACAAAAT 59.833 33.333 0.00 0.00 0.00 1.82
2335 5566 6.469595 CGGTGAACAGTAAAATCGAAACAAAA 59.530 34.615 0.00 0.00 0.00 2.44
2336 5567 5.966503 CGGTGAACAGTAAAATCGAAACAAA 59.033 36.000 0.00 0.00 0.00 2.83
2337 5568 5.293814 TCGGTGAACAGTAAAATCGAAACAA 59.706 36.000 0.00 0.00 0.00 2.83
2338 5569 4.809958 TCGGTGAACAGTAAAATCGAAACA 59.190 37.500 0.00 0.00 0.00 2.83
2339 5570 5.333046 TCGGTGAACAGTAAAATCGAAAC 57.667 39.130 0.00 0.00 0.00 2.78
2340 5571 4.084223 GCTCGGTGAACAGTAAAATCGAAA 60.084 41.667 0.00 0.00 0.00 3.46
2341 5572 3.430895 GCTCGGTGAACAGTAAAATCGAA 59.569 43.478 0.00 0.00 0.00 3.71
2342 5573 2.991190 GCTCGGTGAACAGTAAAATCGA 59.009 45.455 0.00 0.00 0.00 3.59
2343 5574 2.993899 AGCTCGGTGAACAGTAAAATCG 59.006 45.455 0.00 0.00 0.00 3.34
2344 5575 3.994392 TGAGCTCGGTGAACAGTAAAATC 59.006 43.478 9.64 0.00 0.00 2.17
2345 5576 4.002906 TGAGCTCGGTGAACAGTAAAAT 57.997 40.909 9.64 0.00 0.00 1.82
2346 5577 3.462483 TGAGCTCGGTGAACAGTAAAA 57.538 42.857 9.64 0.00 0.00 1.52
2347 5578 3.678056 ATGAGCTCGGTGAACAGTAAA 57.322 42.857 9.64 0.00 0.00 2.01
2348 5579 3.678056 AATGAGCTCGGTGAACAGTAA 57.322 42.857 9.64 0.00 0.00 2.24
2349 5580 3.006430 TCAAATGAGCTCGGTGAACAGTA 59.994 43.478 9.64 0.00 0.00 2.74
2350 5581 2.146342 CAAATGAGCTCGGTGAACAGT 58.854 47.619 9.64 0.00 0.00 3.55
2351 5582 2.414481 CTCAAATGAGCTCGGTGAACAG 59.586 50.000 9.64 0.00 35.13 3.16
2352 5583 2.416747 CTCAAATGAGCTCGGTGAACA 58.583 47.619 9.64 0.00 35.13 3.18
2373 5604 1.743252 GTGCCTTTCTGCTCCCGAG 60.743 63.158 0.00 0.00 0.00 4.63
2374 5605 1.768684 AAGTGCCTTTCTGCTCCCGA 61.769 55.000 0.00 0.00 0.00 5.14
2375 5606 0.890996 AAAGTGCCTTTCTGCTCCCG 60.891 55.000 0.00 0.00 0.00 5.14
2376 5607 0.884514 GAAAGTGCCTTTCTGCTCCC 59.115 55.000 16.08 0.00 44.33 4.30
2377 5608 1.538950 CTGAAAGTGCCTTTCTGCTCC 59.461 52.381 20.96 3.43 46.84 4.70
2378 5609 1.538950 CCTGAAAGTGCCTTTCTGCTC 59.461 52.381 20.96 3.99 46.84 4.26
2379 5610 1.613836 CCTGAAAGTGCCTTTCTGCT 58.386 50.000 20.96 0.00 46.84 4.24
2380 5611 0.600057 CCCTGAAAGTGCCTTTCTGC 59.400 55.000 20.96 0.00 46.84 4.26
2381 5612 0.600057 GCCCTGAAAGTGCCTTTCTG 59.400 55.000 20.96 19.87 46.84 3.02
2382 5613 0.890996 CGCCCTGAAAGTGCCTTTCT 60.891 55.000 20.96 0.00 46.84 2.52
2383 5614 0.889186 TCGCCCTGAAAGTGCCTTTC 60.889 55.000 16.35 16.35 46.88 2.62
2384 5615 1.150536 TCGCCCTGAAAGTGCCTTT 59.849 52.632 0.46 0.46 36.29 3.11
2385 5616 1.600916 GTCGCCCTGAAAGTGCCTT 60.601 57.895 0.00 0.00 0.00 4.35
2386 5617 2.032681 GTCGCCCTGAAAGTGCCT 59.967 61.111 0.00 0.00 0.00 4.75
2387 5618 2.032681 AGTCGCCCTGAAAGTGCC 59.967 61.111 0.00 0.00 0.00 5.01
2388 5619 1.301716 TGAGTCGCCCTGAAAGTGC 60.302 57.895 0.00 0.00 0.00 4.40
2389 5620 1.284982 CGTGAGTCGCCCTGAAAGTG 61.285 60.000 0.00 0.00 0.00 3.16
2390 5621 1.006102 CGTGAGTCGCCCTGAAAGT 60.006 57.895 0.00 0.00 0.00 2.66
2391 5622 1.738099 CCGTGAGTCGCCCTGAAAG 60.738 63.158 0.00 0.00 38.35 2.62
2392 5623 1.180456 TACCGTGAGTCGCCCTGAAA 61.180 55.000 0.00 0.00 38.35 2.69
2393 5624 1.592400 CTACCGTGAGTCGCCCTGAA 61.592 60.000 0.00 0.00 38.35 3.02
2394 5625 2.034532 TACCGTGAGTCGCCCTGA 59.965 61.111 0.00 0.00 38.35 3.86
2395 5626 2.490217 CTACCGTGAGTCGCCCTG 59.510 66.667 0.00 0.00 38.35 4.45
2396 5627 3.450115 GCTACCGTGAGTCGCCCT 61.450 66.667 0.00 0.00 38.35 5.19
2397 5628 2.573609 AATGCTACCGTGAGTCGCCC 62.574 60.000 0.00 0.00 36.35 6.13
2398 5629 1.146358 GAATGCTACCGTGAGTCGCC 61.146 60.000 0.00 0.00 36.35 5.54
2399 5630 0.457853 TGAATGCTACCGTGAGTCGC 60.458 55.000 0.00 0.00 37.67 5.19
2400 5631 1.990799 TTGAATGCTACCGTGAGTCG 58.009 50.000 0.00 0.00 39.52 4.18
2401 5632 2.092211 CGTTTGAATGCTACCGTGAGTC 59.908 50.000 0.00 0.00 0.00 3.36
2402 5633 2.066262 CGTTTGAATGCTACCGTGAGT 58.934 47.619 0.00 0.00 0.00 3.41
2403 5634 2.333926 TCGTTTGAATGCTACCGTGAG 58.666 47.619 0.00 0.00 0.00 3.51
2404 5635 2.029739 TCTCGTTTGAATGCTACCGTGA 60.030 45.455 0.00 0.00 0.00 4.35
2405 5636 2.092211 GTCTCGTTTGAATGCTACCGTG 59.908 50.000 0.00 0.00 0.00 4.94
2406 5637 2.029290 AGTCTCGTTTGAATGCTACCGT 60.029 45.455 0.00 0.00 0.00 4.83
2444 5675 5.647658 GGTGAATATGAAACATGAGTGGACA 59.352 40.000 0.00 0.00 0.00 4.02
2481 5718 2.053618 CATCCCATCGAGGAGGTCC 58.946 63.158 0.00 0.00 39.95 4.46
2488 5725 0.316522 ATCTGTCGCATCCCATCGAG 59.683 55.000 0.00 0.00 35.21 4.04


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.