Multiple sequence alignment - TraesCS7B01G427200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G427200 chr7B 100.000 2580 0 0 1 2580 696364102 696361523 0.000000e+00 4765.0
1 TraesCS7B01G427200 chr7B 85.918 632 34 17 1954 2544 71523168 71522551 7.840000e-175 623.0
2 TraesCS7B01G427200 chr7B 85.886 333 44 3 1064 1393 696595124 696594792 4.080000e-93 351.0
3 TraesCS7B01G427200 chr7B 79.883 512 66 20 806 1282 696283701 696283192 8.840000e-90 340.0
4 TraesCS7B01G427200 chr7B 92.593 162 11 1 1793 1953 60688399 60688238 5.550000e-57 231.0
5 TraesCS7B01G427200 chr7B 79.939 329 37 14 388 695 696286845 696286525 5.590000e-52 215.0
6 TraesCS7B01G427200 chr7B 91.781 146 10 1 1368 1511 696283151 696283006 4.350000e-48 202.0
7 TraesCS7B01G427200 chr7B 84.699 183 27 1 1954 2136 328805256 328805437 5.670000e-42 182.0
8 TraesCS7B01G427200 chr7B 79.468 263 30 11 388 647 693198706 693198465 5.710000e-37 165.0
9 TraesCS7B01G427200 chr7B 82.857 140 14 7 498 631 698858210 698858075 1.620000e-22 117.0
10 TraesCS7B01G427200 chr7B 80.519 154 18 8 498 647 693793474 693793329 9.760000e-20 108.0
11 TraesCS7B01G427200 chr7B 85.321 109 10 3 498 600 694767278 694767170 9.760000e-20 108.0
12 TraesCS7B01G427200 chr7B 93.103 58 4 0 388 445 694767335 694767278 4.570000e-13 86.1
13 TraesCS7B01G427200 chr7B 90.164 61 4 2 1662 1721 693820794 693820735 7.650000e-11 78.7
14 TraesCS7B01G427200 chr7B 92.453 53 3 1 1710 1762 698856896 698856845 9.900000e-10 75.0
15 TraesCS7B01G427200 chr7B 91.667 48 1 3 899 944 698857737 698857691 2.140000e-06 63.9
16 TraesCS7B01G427200 chr2B 86.392 632 35 16 1954 2544 6468832 6468211 0.000000e+00 643.0
17 TraesCS7B01G427200 chr6B 89.189 518 40 5 2042 2544 1262799 1262283 1.300000e-177 632.0
18 TraesCS7B01G427200 chr6B 93.617 47 3 0 206 252 708206315 708206361 1.280000e-08 71.3
19 TraesCS7B01G427200 chr5A 85.962 634 34 17 1952 2544 683555201 683554582 6.060000e-176 627.0
20 TraesCS7B01G427200 chr3B 85.918 632 34 17 1954 2544 78702805 78703422 7.840000e-175 623.0
21 TraesCS7B01G427200 chr1B 85.782 633 35 17 1953 2544 37208976 37208358 1.010000e-173 619.0
22 TraesCS7B01G427200 chr1B 93.210 162 10 1 1793 1953 137621082 137620921 1.190000e-58 237.0
23 TraesCS7B01G427200 chr1B 91.925 161 13 0 1954 2114 2750536 2750696 2.580000e-55 226.0
24 TraesCS7B01G427200 chr7D 81.871 684 72 25 740 1397 608443604 608442947 1.760000e-146 529.0
25 TraesCS7B01G427200 chr7D 82.566 608 76 15 798 1377 514994069 514993464 2.290000e-140 508.0
26 TraesCS7B01G427200 chr7D 77.885 728 97 38 917 1605 608488237 608487535 6.690000e-106 394.0
27 TraesCS7B01G427200 chr7D 86.012 336 41 2 1064 1393 610240562 610240897 3.160000e-94 355.0
28 TraesCS7B01G427200 chr7D 87.220 313 34 4 1087 1393 607562158 607561846 4.080000e-93 351.0
29 TraesCS7B01G427200 chr7D 94.231 156 8 1 1793 1947 194479595 194479750 1.190000e-58 237.0
30 TraesCS7B01G427200 chr7D 86.301 219 19 6 498 712 514994281 514994070 7.180000e-56 228.0
31 TraesCS7B01G427200 chr7D 90.411 146 12 2 498 642 610240017 610240161 9.420000e-45 191.0
32 TraesCS7B01G427200 chr7D 87.838 148 15 2 498 642 607547201 607547054 1.230000e-38 171.0
33 TraesCS7B01G427200 chr7D 91.358 81 7 0 404 484 610239951 610240031 7.550000e-21 111.0
34 TraesCS7B01G427200 chr7D 92.208 77 6 0 399 475 607547272 607547196 2.710000e-20 110.0
35 TraesCS7B01G427200 chr7D 96.364 55 2 0 1558 1612 608442949 608442895 9.830000e-15 91.6
36 TraesCS7B01G427200 chr7D 92.593 54 4 0 388 441 607564356 607564303 7.650000e-11 78.7
37 TraesCS7B01G427200 chr7D 91.837 49 3 1 1717 1765 608487374 608487327 1.660000e-07 67.6
38 TraesCS7B01G427200 chr7D 100.000 29 0 0 1729 1757 608454720 608454692 1.000000e-03 54.7
39 TraesCS7B01G427200 chr7A 81.961 510 61 21 910 1393 699766598 699766094 1.110000e-108 403.0
40 TraesCS7B01G427200 chr7A 84.615 338 41 8 1060 1389 700451312 700450978 2.480000e-85 326.0
41 TraesCS7B01G427200 chr7A 79.435 248 22 12 388 631 700452074 700451852 5.750000e-32 148.0
42 TraesCS7B01G427200 chr7A 90.722 97 9 0 388 484 699741460 699741364 2.080000e-26 130.0
43 TraesCS7B01G427200 chr7A 86.792 106 8 5 498 600 699741378 699741276 2.100000e-21 113.0
44 TraesCS7B01G427200 chr7A 85.417 96 12 2 312 407 699741679 699741586 5.880000e-17 99.0
45 TraesCS7B01G427200 chr7A 86.022 93 6 5 388 473 699744454 699744362 2.730000e-15 93.5
46 TraesCS7B01G427200 chr4A 86.880 343 38 5 1057 1393 661973714 661974055 6.740000e-101 377.0
47 TraesCS7B01G427200 chr4A 93.103 58 3 1 1705 1762 661974397 661974453 1.650000e-12 84.2
48 TraesCS7B01G427200 chr4A 92.453 53 2 2 396 447 661972998 661973049 9.900000e-10 75.0
49 TraesCS7B01G427200 chr6A 86.111 252 26 5 1 252 466695058 466695300 1.970000e-66 263.0
50 TraesCS7B01G427200 chr6A 93.878 98 6 0 146 243 599805074 599805171 5.750000e-32 148.0
51 TraesCS7B01G427200 chr5D 92.593 162 11 1 1793 1953 350811058 350810897 5.550000e-57 231.0
52 TraesCS7B01G427200 chr5B 92.593 162 11 1 1793 1953 528534140 528533979 5.550000e-57 231.0
53 TraesCS7B01G427200 chr4D 93.082 159 10 1 1796 1953 289338373 289338215 5.550000e-57 231.0
54 TraesCS7B01G427200 chr4B 92.593 162 10 2 1794 1953 241343411 241343572 5.550000e-57 231.0
55 TraesCS7B01G427200 chr4B 92.593 162 11 1 1793 1953 241345866 241346027 5.550000e-57 231.0
56 TraesCS7B01G427200 chr3A 93.590 156 9 1 1793 1947 117838243 117838398 5.550000e-57 231.0
57 TraesCS7B01G427200 chr1D 82.540 252 34 8 3 252 397060741 397060498 2.010000e-51 213.0
58 TraesCS7B01G427200 chrUn 77.632 228 31 16 2362 2575 88756086 88756307 1.250000e-23 121.0
59 TraesCS7B01G427200 chrUn 87.500 80 4 1 574 647 77545541 77545462 1.270000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G427200 chr7B 696361523 696364102 2579 True 4765.000000 4765 100.000000 1 2580 1 chr7B.!!$R6 2579
1 TraesCS7B01G427200 chr7B 71522551 71523168 617 True 623.000000 623 85.918000 1954 2544 1 chr7B.!!$R2 590
2 TraesCS7B01G427200 chr7B 696283006 696286845 3839 True 252.333333 340 83.867667 388 1511 3 chr7B.!!$R9 1123
3 TraesCS7B01G427200 chr2B 6468211 6468832 621 True 643.000000 643 86.392000 1954 2544 1 chr2B.!!$R1 590
4 TraesCS7B01G427200 chr6B 1262283 1262799 516 True 632.000000 632 89.189000 2042 2544 1 chr6B.!!$R1 502
5 TraesCS7B01G427200 chr5A 683554582 683555201 619 True 627.000000 627 85.962000 1952 2544 1 chr5A.!!$R1 592
6 TraesCS7B01G427200 chr3B 78702805 78703422 617 False 623.000000 623 85.918000 1954 2544 1 chr3B.!!$F1 590
7 TraesCS7B01G427200 chr1B 37208358 37208976 618 True 619.000000 619 85.782000 1953 2544 1 chr1B.!!$R1 591
8 TraesCS7B01G427200 chr7D 514993464 514994281 817 True 368.000000 508 84.433500 498 1377 2 chr7D.!!$R2 879
9 TraesCS7B01G427200 chr7D 608442895 608443604 709 True 310.300000 529 89.117500 740 1612 2 chr7D.!!$R5 872
10 TraesCS7B01G427200 chr7D 608487327 608488237 910 True 230.800000 394 84.861000 917 1765 2 chr7D.!!$R6 848
11 TraesCS7B01G427200 chr7D 610239951 610240897 946 False 219.000000 355 89.260333 404 1393 3 chr7D.!!$F2 989
12 TraesCS7B01G427200 chr7D 607561846 607564356 2510 True 214.850000 351 89.906500 388 1393 2 chr7D.!!$R4 1005
13 TraesCS7B01G427200 chr7A 699766094 699766598 504 True 403.000000 403 81.961000 910 1393 1 chr7A.!!$R1 483
14 TraesCS7B01G427200 chr7A 700450978 700452074 1096 True 237.000000 326 82.025000 388 1389 2 chr7A.!!$R3 1001
15 TraesCS7B01G427200 chr4B 241343411 241346027 2616 False 231.000000 231 92.593000 1793 1953 2 chr4B.!!$F1 160

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
46 47 0.032952 TGTCCACAACGCTGACCTAC 59.967 55.0 0.0 0.0 0.0 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1618 6195 0.034059 ATTCCCGACCGCAGATGATC 59.966 55.0 0.0 0.0 0.0 2.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 38 6.548441 TTTTATAGAACCTTGTCCACAACG 57.452 37.500 0.00 0.00 0.00 4.10
38 39 1.873698 TAGAACCTTGTCCACAACGC 58.126 50.000 0.00 0.00 0.00 4.84
39 40 0.180406 AGAACCTTGTCCACAACGCT 59.820 50.000 0.00 0.00 0.00 5.07
40 41 0.307760 GAACCTTGTCCACAACGCTG 59.692 55.000 0.00 0.00 0.00 5.18
41 42 0.107410 AACCTTGTCCACAACGCTGA 60.107 50.000 0.00 0.00 0.00 4.26
42 43 0.814010 ACCTTGTCCACAACGCTGAC 60.814 55.000 0.00 0.00 0.00 3.51
43 44 1.507141 CCTTGTCCACAACGCTGACC 61.507 60.000 0.00 0.00 0.00 4.02
44 45 0.532862 CTTGTCCACAACGCTGACCT 60.533 55.000 0.00 0.00 0.00 3.85
45 46 0.753867 TTGTCCACAACGCTGACCTA 59.246 50.000 0.00 0.00 0.00 3.08
46 47 0.032952 TGTCCACAACGCTGACCTAC 59.967 55.000 0.00 0.00 0.00 3.18
47 48 0.032952 GTCCACAACGCTGACCTACA 59.967 55.000 0.00 0.00 0.00 2.74
48 49 0.973632 TCCACAACGCTGACCTACAT 59.026 50.000 0.00 0.00 0.00 2.29
49 50 1.078709 CCACAACGCTGACCTACATG 58.921 55.000 0.00 0.00 0.00 3.21
50 51 0.443869 CACAACGCTGACCTACATGC 59.556 55.000 0.00 0.00 0.00 4.06
51 52 0.034756 ACAACGCTGACCTACATGCA 59.965 50.000 0.00 0.00 0.00 3.96
52 53 0.723414 CAACGCTGACCTACATGCAG 59.277 55.000 0.00 0.00 0.00 4.41
53 54 0.608130 AACGCTGACCTACATGCAGA 59.392 50.000 0.00 0.00 0.00 4.26
54 55 0.174389 ACGCTGACCTACATGCAGAG 59.826 55.000 0.00 0.00 35.88 3.35
55 56 1.150567 CGCTGACCTACATGCAGAGC 61.151 60.000 0.00 0.00 0.00 4.09
56 57 0.107993 GCTGACCTACATGCAGAGCA 60.108 55.000 0.00 0.00 44.86 4.26
57 58 1.937278 CTGACCTACATGCAGAGCAG 58.063 55.000 0.00 0.00 43.65 4.24
58 59 0.538584 TGACCTACATGCAGAGCAGG 59.461 55.000 1.77 1.77 46.22 4.85
59 60 0.826715 GACCTACATGCAGAGCAGGA 59.173 55.000 10.80 0.00 43.36 3.86
60 61 1.415659 GACCTACATGCAGAGCAGGAT 59.584 52.381 10.80 0.00 43.36 3.24
61 62 1.842562 ACCTACATGCAGAGCAGGATT 59.157 47.619 10.80 0.00 43.36 3.01
62 63 2.219458 CCTACATGCAGAGCAGGATTG 58.781 52.381 10.80 0.00 43.36 2.67
73 74 2.951269 CAGGATTGCAACAGCCTCA 58.049 52.632 12.90 0.00 0.00 3.86
74 75 0.524862 CAGGATTGCAACAGCCTCAC 59.475 55.000 12.90 0.00 0.00 3.51
75 76 0.403271 AGGATTGCAACAGCCTCACT 59.597 50.000 0.00 0.00 0.00 3.41
85 86 1.220206 AGCCTCACTGAAGCATCCG 59.780 57.895 2.48 0.00 0.00 4.18
86 87 1.078848 GCCTCACTGAAGCATCCGT 60.079 57.895 0.00 0.00 0.00 4.69
87 88 1.086634 GCCTCACTGAAGCATCCGTC 61.087 60.000 0.00 0.00 0.00 4.79
88 89 0.460987 CCTCACTGAAGCATCCGTCC 60.461 60.000 0.00 0.00 0.00 4.79
89 90 0.803768 CTCACTGAAGCATCCGTCCG 60.804 60.000 0.00 0.00 0.00 4.79
90 91 1.215382 CACTGAAGCATCCGTCCGA 59.785 57.895 0.00 0.00 0.00 4.55
91 92 0.179100 CACTGAAGCATCCGTCCGAT 60.179 55.000 0.00 0.00 0.00 4.18
92 93 0.103208 ACTGAAGCATCCGTCCGATC 59.897 55.000 0.00 0.00 0.00 3.69
93 94 0.936764 CTGAAGCATCCGTCCGATCG 60.937 60.000 8.51 8.51 0.00 3.69
94 95 1.065928 GAAGCATCCGTCCGATCGT 59.934 57.895 15.09 0.00 0.00 3.73
95 96 0.527817 GAAGCATCCGTCCGATCGTT 60.528 55.000 15.09 0.00 0.00 3.85
96 97 0.527817 AAGCATCCGTCCGATCGTTC 60.528 55.000 15.09 5.57 0.00 3.95
97 98 2.293627 GCATCCGTCCGATCGTTCG 61.294 63.158 15.09 16.75 45.08 3.95
98 99 1.063649 CATCCGTCCGATCGTTCGT 59.936 57.895 15.09 0.89 43.97 3.85
99 100 0.524816 CATCCGTCCGATCGTTCGTT 60.525 55.000 15.09 5.42 43.97 3.85
100 101 0.248377 ATCCGTCCGATCGTTCGTTC 60.248 55.000 15.09 6.37 43.97 3.95
101 102 2.212983 CCGTCCGATCGTTCGTTCG 61.213 63.158 15.09 15.84 43.97 3.95
102 103 1.510623 CGTCCGATCGTTCGTTCGT 60.511 57.895 15.09 0.00 43.97 3.85
103 104 1.451307 CGTCCGATCGTTCGTTCGTC 61.451 60.000 15.09 12.87 43.97 4.20
104 105 1.225827 TCCGATCGTTCGTTCGTCG 60.226 57.895 15.09 12.13 43.97 5.12
114 115 2.838386 TCGTTCGTCGATAAAGGGAG 57.162 50.000 0.00 0.00 44.01 4.30
115 116 1.402968 TCGTTCGTCGATAAAGGGAGG 59.597 52.381 0.00 0.00 44.01 4.30
116 117 1.568606 GTTCGTCGATAAAGGGAGGC 58.431 55.000 0.00 0.00 0.00 4.70
117 118 1.134907 GTTCGTCGATAAAGGGAGGCA 60.135 52.381 0.00 0.00 0.00 4.75
118 119 0.458669 TCGTCGATAAAGGGAGGCAC 59.541 55.000 0.00 0.00 0.00 5.01
131 132 1.676384 AGGCACTCACAGAAGGAGC 59.324 57.895 0.00 0.00 35.79 4.70
132 133 0.835543 AGGCACTCACAGAAGGAGCT 60.836 55.000 0.00 0.00 35.79 4.09
133 134 0.390998 GGCACTCACAGAAGGAGCTC 60.391 60.000 4.71 4.71 35.79 4.09
134 135 0.319728 GCACTCACAGAAGGAGCTCA 59.680 55.000 17.19 0.00 35.79 4.26
135 136 1.672441 GCACTCACAGAAGGAGCTCAG 60.672 57.143 17.19 3.88 35.79 3.35
136 137 1.067000 CACTCACAGAAGGAGCTCAGG 60.067 57.143 17.19 1.96 35.79 3.86
137 138 0.536260 CTCACAGAAGGAGCTCAGGG 59.464 60.000 17.19 2.34 0.00 4.45
138 139 0.178921 TCACAGAAGGAGCTCAGGGT 60.179 55.000 17.19 3.00 0.00 4.34
139 140 0.248843 CACAGAAGGAGCTCAGGGTC 59.751 60.000 17.19 6.57 39.05 4.46
145 146 4.154347 GAGCTCAGGGTCCGGCAG 62.154 72.222 9.40 0.00 34.23 4.85
188 189 3.712881 GCGCTCACCACCGTTGTC 61.713 66.667 0.00 0.00 0.00 3.18
189 190 3.403057 CGCTCACCACCGTTGTCG 61.403 66.667 0.00 0.00 0.00 4.35
190 191 2.028484 GCTCACCACCGTTGTCGA 59.972 61.111 0.00 0.00 39.71 4.20
191 192 1.593209 GCTCACCACCGTTGTCGAA 60.593 57.895 0.00 0.00 39.71 3.71
192 193 0.949105 GCTCACCACCGTTGTCGAAT 60.949 55.000 0.00 0.00 39.71 3.34
193 194 0.790207 CTCACCACCGTTGTCGAATG 59.210 55.000 0.00 0.00 39.71 2.67
194 195 0.105224 TCACCACCGTTGTCGAATGT 59.895 50.000 0.00 0.00 39.71 2.71
195 196 0.511221 CACCACCGTTGTCGAATGTC 59.489 55.000 0.00 0.00 39.71 3.06
196 197 0.105224 ACCACCGTTGTCGAATGTCA 59.895 50.000 0.00 0.00 39.71 3.58
197 198 1.270625 ACCACCGTTGTCGAATGTCAT 60.271 47.619 0.00 0.00 39.71 3.06
198 199 1.128507 CCACCGTTGTCGAATGTCATG 59.871 52.381 0.00 0.00 39.71 3.07
199 200 1.128507 CACCGTTGTCGAATGTCATGG 59.871 52.381 0.00 0.00 39.71 3.66
200 201 0.096976 CCGTTGTCGAATGTCATGGC 59.903 55.000 0.00 0.00 39.71 4.40
201 202 1.078709 CGTTGTCGAATGTCATGGCT 58.921 50.000 0.00 0.00 39.71 4.75
202 203 1.464608 CGTTGTCGAATGTCATGGCTT 59.535 47.619 0.00 0.00 39.71 4.35
203 204 2.670905 CGTTGTCGAATGTCATGGCTTA 59.329 45.455 0.00 0.00 39.71 3.09
204 205 3.309682 CGTTGTCGAATGTCATGGCTTAT 59.690 43.478 0.00 0.00 39.71 1.73
205 206 4.201812 CGTTGTCGAATGTCATGGCTTATT 60.202 41.667 0.00 0.00 39.71 1.40
206 207 5.640732 GTTGTCGAATGTCATGGCTTATTT 58.359 37.500 0.00 0.00 0.00 1.40
207 208 5.895636 TGTCGAATGTCATGGCTTATTTT 57.104 34.783 0.00 0.00 0.00 1.82
208 209 5.639757 TGTCGAATGTCATGGCTTATTTTG 58.360 37.500 0.00 0.00 0.00 2.44
209 210 5.182950 TGTCGAATGTCATGGCTTATTTTGT 59.817 36.000 0.00 0.00 0.00 2.83
210 211 5.512788 GTCGAATGTCATGGCTTATTTTGTG 59.487 40.000 0.00 0.00 0.00 3.33
211 212 4.266029 CGAATGTCATGGCTTATTTTGTGC 59.734 41.667 0.00 0.00 0.00 4.57
212 213 5.410355 AATGTCATGGCTTATTTTGTGCT 57.590 34.783 0.00 0.00 0.00 4.40
213 214 4.439305 TGTCATGGCTTATTTTGTGCTC 57.561 40.909 0.00 0.00 0.00 4.26
214 215 4.081406 TGTCATGGCTTATTTTGTGCTCT 58.919 39.130 0.00 0.00 0.00 4.09
215 216 4.156556 TGTCATGGCTTATTTTGTGCTCTC 59.843 41.667 0.00 0.00 0.00 3.20
216 217 4.397417 GTCATGGCTTATTTTGTGCTCTCT 59.603 41.667 0.00 0.00 0.00 3.10
217 218 4.397103 TCATGGCTTATTTTGTGCTCTCTG 59.603 41.667 0.00 0.00 0.00 3.35
218 219 3.084039 TGGCTTATTTTGTGCTCTCTGG 58.916 45.455 0.00 0.00 0.00 3.86
219 220 2.159324 GGCTTATTTTGTGCTCTCTGGC 60.159 50.000 0.00 0.00 0.00 4.85
220 221 2.159324 GCTTATTTTGTGCTCTCTGGCC 60.159 50.000 0.00 0.00 0.00 5.36
221 222 2.877097 TATTTTGTGCTCTCTGGCCA 57.123 45.000 4.71 4.71 0.00 5.36
222 223 1.542492 ATTTTGTGCTCTCTGGCCAG 58.458 50.000 27.87 27.87 0.00 4.85
223 224 1.174712 TTTTGTGCTCTCTGGCCAGC 61.175 55.000 28.91 17.97 36.08 4.85
224 225 3.557903 TTGTGCTCTCTGGCCAGCC 62.558 63.158 28.91 15.59 34.47 4.85
225 226 4.792804 GTGCTCTCTGGCCAGCCC 62.793 72.222 28.91 15.24 34.47 5.19
227 228 4.039092 GCTCTCTGGCCAGCCCAA 62.039 66.667 28.91 9.99 44.81 4.12
228 229 2.045536 CTCTCTGGCCAGCCCAAC 60.046 66.667 28.91 0.00 44.81 3.77
229 230 2.530151 TCTCTGGCCAGCCCAACT 60.530 61.111 28.91 0.00 44.81 3.16
230 231 2.134630 CTCTCTGGCCAGCCCAACTT 62.135 60.000 28.91 0.00 44.81 2.66
231 232 1.228675 CTCTGGCCAGCCCAACTTT 60.229 57.895 28.91 0.00 44.81 2.66
232 233 0.829182 CTCTGGCCAGCCCAACTTTT 60.829 55.000 28.91 0.00 44.81 2.27
233 234 0.827507 TCTGGCCAGCCCAACTTTTC 60.828 55.000 28.91 0.00 44.81 2.29
234 235 0.829182 CTGGCCAGCCCAACTTTTCT 60.829 55.000 22.33 0.00 44.81 2.52
235 236 0.398381 TGGCCAGCCCAACTTTTCTT 60.398 50.000 0.00 0.00 41.82 2.52
236 237 0.758734 GGCCAGCCCAACTTTTCTTT 59.241 50.000 0.00 0.00 0.00 2.52
237 238 1.140852 GGCCAGCCCAACTTTTCTTTT 59.859 47.619 0.00 0.00 0.00 2.27
238 239 2.212652 GCCAGCCCAACTTTTCTTTTG 58.787 47.619 0.00 0.00 0.00 2.44
239 240 2.419990 GCCAGCCCAACTTTTCTTTTGT 60.420 45.455 0.00 0.00 0.00 2.83
240 241 3.181470 GCCAGCCCAACTTTTCTTTTGTA 60.181 43.478 0.00 0.00 0.00 2.41
241 242 4.620982 CCAGCCCAACTTTTCTTTTGTAG 58.379 43.478 0.00 0.00 0.00 2.74
242 243 4.051237 CAGCCCAACTTTTCTTTTGTAGC 58.949 43.478 0.00 0.00 0.00 3.58
243 244 3.960755 AGCCCAACTTTTCTTTTGTAGCT 59.039 39.130 0.00 0.00 0.00 3.32
244 245 4.405680 AGCCCAACTTTTCTTTTGTAGCTT 59.594 37.500 0.00 0.00 30.36 3.74
245 246 4.745125 GCCCAACTTTTCTTTTGTAGCTTC 59.255 41.667 0.00 0.00 0.00 3.86
246 247 4.976116 CCCAACTTTTCTTTTGTAGCTTCG 59.024 41.667 0.00 0.00 0.00 3.79
247 248 4.441087 CCAACTTTTCTTTTGTAGCTTCGC 59.559 41.667 0.00 0.00 0.00 4.70
248 249 4.224715 ACTTTTCTTTTGTAGCTTCGCC 57.775 40.909 0.00 0.00 0.00 5.54
249 250 3.630312 ACTTTTCTTTTGTAGCTTCGCCA 59.370 39.130 0.00 0.00 0.00 5.69
250 251 3.619233 TTTCTTTTGTAGCTTCGCCAC 57.381 42.857 0.00 0.00 0.00 5.01
251 252 2.543777 TCTTTTGTAGCTTCGCCACT 57.456 45.000 0.00 0.00 0.00 4.00
252 253 3.671008 TCTTTTGTAGCTTCGCCACTA 57.329 42.857 0.00 0.00 0.00 2.74
253 254 3.585862 TCTTTTGTAGCTTCGCCACTAG 58.414 45.455 0.00 0.00 0.00 2.57
254 255 2.380084 TTTGTAGCTTCGCCACTAGG 57.620 50.000 0.00 0.00 38.23 3.02
264 265 4.823276 CCACTAGGCTGAAGCTCG 57.177 61.111 0.00 0.00 41.70 5.03
265 266 1.520342 CCACTAGGCTGAAGCTCGC 60.520 63.158 0.00 0.00 41.70 5.03
266 267 1.520342 CACTAGGCTGAAGCTCGCC 60.520 63.158 12.34 12.34 46.65 5.54
270 271 2.825264 GGCTGAAGCTCGCCCTAT 59.175 61.111 9.79 0.00 40.43 2.57
271 272 1.301322 GGCTGAAGCTCGCCCTATC 60.301 63.158 9.79 0.00 40.43 2.08
272 273 1.301322 GCTGAAGCTCGCCCTATCC 60.301 63.158 0.00 0.00 38.21 2.59
273 274 1.753368 GCTGAAGCTCGCCCTATCCT 61.753 60.000 0.00 0.00 38.21 3.24
274 275 1.621992 CTGAAGCTCGCCCTATCCTA 58.378 55.000 0.00 0.00 0.00 2.94
275 276 1.271102 CTGAAGCTCGCCCTATCCTAC 59.729 57.143 0.00 0.00 0.00 3.18
276 277 1.133450 TGAAGCTCGCCCTATCCTACT 60.133 52.381 0.00 0.00 0.00 2.57
277 278 1.542472 GAAGCTCGCCCTATCCTACTC 59.458 57.143 0.00 0.00 0.00 2.59
278 279 0.774908 AGCTCGCCCTATCCTACTCT 59.225 55.000 0.00 0.00 0.00 3.24
279 280 1.986631 AGCTCGCCCTATCCTACTCTA 59.013 52.381 0.00 0.00 0.00 2.43
280 281 2.026636 AGCTCGCCCTATCCTACTCTAG 60.027 54.545 0.00 0.00 0.00 2.43
281 282 2.361789 CTCGCCCTATCCTACTCTAGC 58.638 57.143 0.00 0.00 0.00 3.42
282 283 1.703513 TCGCCCTATCCTACTCTAGCA 59.296 52.381 0.00 0.00 0.00 3.49
283 284 2.309162 TCGCCCTATCCTACTCTAGCAT 59.691 50.000 0.00 0.00 0.00 3.79
284 285 3.093057 CGCCCTATCCTACTCTAGCATT 58.907 50.000 0.00 0.00 0.00 3.56
285 286 3.119316 CGCCCTATCCTACTCTAGCATTG 60.119 52.174 0.00 0.00 0.00 2.82
286 287 3.835395 GCCCTATCCTACTCTAGCATTGT 59.165 47.826 0.00 0.00 0.00 2.71
287 288 5.017490 GCCCTATCCTACTCTAGCATTGTA 58.983 45.833 0.00 0.00 0.00 2.41
288 289 5.105675 GCCCTATCCTACTCTAGCATTGTAC 60.106 48.000 0.00 0.00 0.00 2.90
289 290 6.249951 CCCTATCCTACTCTAGCATTGTACT 58.750 44.000 0.00 0.00 0.00 2.73
290 291 6.376018 CCCTATCCTACTCTAGCATTGTACTC 59.624 46.154 0.00 0.00 0.00 2.59
291 292 6.376018 CCTATCCTACTCTAGCATTGTACTCC 59.624 46.154 0.00 0.00 0.00 3.85
292 293 5.390087 TCCTACTCTAGCATTGTACTCCT 57.610 43.478 0.00 0.00 0.00 3.69
293 294 6.511017 TCCTACTCTAGCATTGTACTCCTA 57.489 41.667 0.00 0.00 0.00 2.94
294 295 6.297582 TCCTACTCTAGCATTGTACTCCTAC 58.702 44.000 0.00 0.00 0.00 3.18
295 296 6.101442 TCCTACTCTAGCATTGTACTCCTACT 59.899 42.308 0.00 0.00 0.00 2.57
296 297 6.205853 CCTACTCTAGCATTGTACTCCTACTG 59.794 46.154 0.00 0.00 0.00 2.74
297 298 4.339814 ACTCTAGCATTGTACTCCTACTGC 59.660 45.833 0.00 0.00 0.00 4.40
298 299 4.537751 TCTAGCATTGTACTCCTACTGCT 58.462 43.478 0.00 0.00 37.82 4.24
299 300 3.533606 AGCATTGTACTCCTACTGCTG 57.466 47.619 0.00 0.00 34.61 4.41
300 301 2.834549 AGCATTGTACTCCTACTGCTGT 59.165 45.455 0.66 0.66 34.61 4.40
301 302 4.023980 AGCATTGTACTCCTACTGCTGTA 58.976 43.478 3.25 3.25 34.61 2.74
302 303 4.113354 GCATTGTACTCCTACTGCTGTAC 58.887 47.826 0.00 0.00 36.69 2.90
303 304 4.352039 CATTGTACTCCTACTGCTGTACG 58.648 47.826 0.00 0.00 38.35 3.67
304 305 3.339253 TGTACTCCTACTGCTGTACGA 57.661 47.619 0.00 1.27 38.35 3.43
305 306 3.882444 TGTACTCCTACTGCTGTACGAT 58.118 45.455 0.00 0.00 38.35 3.73
306 307 5.027293 TGTACTCCTACTGCTGTACGATA 57.973 43.478 0.00 0.00 38.35 2.92
307 308 5.618236 TGTACTCCTACTGCTGTACGATAT 58.382 41.667 0.00 0.00 38.35 1.63
308 309 6.762333 TGTACTCCTACTGCTGTACGATATA 58.238 40.000 0.00 0.00 38.35 0.86
309 310 6.648310 TGTACTCCTACTGCTGTACGATATAC 59.352 42.308 0.00 7.86 38.35 1.47
310 311 5.867330 ACTCCTACTGCTGTACGATATACT 58.133 41.667 0.00 0.00 0.00 2.12
311 312 7.002250 ACTCCTACTGCTGTACGATATACTA 57.998 40.000 0.00 0.00 0.00 1.82
312 313 7.622713 ACTCCTACTGCTGTACGATATACTAT 58.377 38.462 0.00 0.00 0.00 2.12
313 314 7.549842 ACTCCTACTGCTGTACGATATACTATG 59.450 40.741 0.00 0.00 0.00 2.23
314 315 7.392418 TCCTACTGCTGTACGATATACTATGT 58.608 38.462 0.00 0.00 0.00 2.29
315 316 7.333672 TCCTACTGCTGTACGATATACTATGTG 59.666 40.741 0.00 0.00 0.00 3.21
316 317 5.700846 ACTGCTGTACGATATACTATGTGC 58.299 41.667 0.00 0.00 0.00 4.57
317 318 5.240844 ACTGCTGTACGATATACTATGTGCA 59.759 40.000 0.00 0.00 0.00 4.57
318 319 6.071896 ACTGCTGTACGATATACTATGTGCAT 60.072 38.462 0.00 0.00 0.00 3.96
319 320 6.687604 TGCTGTACGATATACTATGTGCATT 58.312 36.000 0.00 0.00 0.00 3.56
320 321 6.586082 TGCTGTACGATATACTATGTGCATTG 59.414 38.462 0.00 0.00 0.00 2.82
321 322 6.035005 GCTGTACGATATACTATGTGCATTGG 59.965 42.308 0.00 0.00 0.00 3.16
322 323 6.394809 TGTACGATATACTATGTGCATTGGG 58.605 40.000 0.00 0.00 0.00 4.12
323 324 4.253685 ACGATATACTATGTGCATTGGGC 58.746 43.478 0.00 0.00 45.13 5.36
332 333 2.202783 GCATTGGGCGCATGGAAC 60.203 61.111 10.83 0.00 0.00 3.62
344 345 2.358125 TGGAACACGCACGGGATG 60.358 61.111 0.00 0.00 0.00 3.51
345 346 2.358247 GGAACACGCACGGGATGT 60.358 61.111 0.00 0.00 0.00 3.06
346 347 2.388232 GGAACACGCACGGGATGTC 61.388 63.158 0.00 0.00 0.00 3.06
347 348 1.374252 GAACACGCACGGGATGTCT 60.374 57.895 0.00 0.00 0.00 3.41
348 349 0.949105 GAACACGCACGGGATGTCTT 60.949 55.000 0.00 0.00 0.00 3.01
349 350 1.227999 AACACGCACGGGATGTCTTG 61.228 55.000 0.00 0.00 0.00 3.02
350 351 1.667830 CACGCACGGGATGTCTTGT 60.668 57.895 0.00 0.00 0.00 3.16
351 352 1.667830 ACGCACGGGATGTCTTGTG 60.668 57.895 0.00 0.00 35.48 3.33
353 354 3.027170 GCACGGGATGTCTTGTGCG 62.027 63.158 11.99 0.00 46.80 5.34
354 355 1.667830 CACGGGATGTCTTGTGCGT 60.668 57.895 0.00 0.00 0.00 5.24
355 356 1.667830 ACGGGATGTCTTGTGCGTG 60.668 57.895 0.00 0.00 0.00 5.34
356 357 1.667830 CGGGATGTCTTGTGCGTGT 60.668 57.895 0.00 0.00 0.00 4.49
357 358 1.227999 CGGGATGTCTTGTGCGTGTT 61.228 55.000 0.00 0.00 0.00 3.32
358 359 0.238289 GGGATGTCTTGTGCGTGTTG 59.762 55.000 0.00 0.00 0.00 3.33
359 360 0.944386 GGATGTCTTGTGCGTGTTGT 59.056 50.000 0.00 0.00 0.00 3.32
360 361 1.334059 GGATGTCTTGTGCGTGTTGTG 60.334 52.381 0.00 0.00 0.00 3.33
361 362 1.330521 GATGTCTTGTGCGTGTTGTGT 59.669 47.619 0.00 0.00 0.00 3.72
362 363 1.160989 TGTCTTGTGCGTGTTGTGTT 58.839 45.000 0.00 0.00 0.00 3.32
363 364 1.135831 TGTCTTGTGCGTGTTGTGTTG 60.136 47.619 0.00 0.00 0.00 3.33
364 365 0.449786 TCTTGTGCGTGTTGTGTTGG 59.550 50.000 0.00 0.00 0.00 3.77
365 366 0.170116 CTTGTGCGTGTTGTGTTGGT 59.830 50.000 0.00 0.00 0.00 3.67
366 367 0.598562 TTGTGCGTGTTGTGTTGGTT 59.401 45.000 0.00 0.00 0.00 3.67
367 368 0.109551 TGTGCGTGTTGTGTTGGTTG 60.110 50.000 0.00 0.00 0.00 3.77
368 369 1.153939 TGCGTGTTGTGTTGGTTGC 60.154 52.632 0.00 0.00 0.00 4.17
369 370 1.138671 GCGTGTTGTGTTGGTTGCT 59.861 52.632 0.00 0.00 0.00 3.91
370 371 0.457681 GCGTGTTGTGTTGGTTGCTT 60.458 50.000 0.00 0.00 0.00 3.91
371 372 1.544686 CGTGTTGTGTTGGTTGCTTC 58.455 50.000 0.00 0.00 0.00 3.86
372 373 1.797348 CGTGTTGTGTTGGTTGCTTCC 60.797 52.381 0.00 0.00 0.00 3.46
373 374 0.453793 TGTTGTGTTGGTTGCTTCCG 59.546 50.000 0.00 0.00 0.00 4.30
374 375 0.869880 GTTGTGTTGGTTGCTTCCGC 60.870 55.000 0.00 0.00 0.00 5.54
375 376 1.315981 TTGTGTTGGTTGCTTCCGCA 61.316 50.000 0.00 0.00 46.24 5.69
401 402 3.740397 CGAGGGCCGTACGACACA 61.740 66.667 18.76 0.00 0.00 3.72
452 455 0.458889 CCTATTCGGTCGGCGTTCAA 60.459 55.000 6.85 0.00 0.00 2.69
460 463 1.083489 GTCGGCGTTCAAATCCATCA 58.917 50.000 6.85 0.00 0.00 3.07
475 478 0.096976 CATCAATTCGGCCGTGTCAC 59.903 55.000 27.15 0.00 0.00 3.67
518 541 6.488006 AGAAGTGTCAGTGCTTTTTATCATGT 59.512 34.615 0.00 0.00 0.00 3.21
528 559 7.383300 AGTGCTTTTTATCATGTTCTTTTCTGC 59.617 33.333 0.00 0.00 0.00 4.26
533 564 8.746922 TTTTATCATGTTCTTTTCTGCATGAC 57.253 30.769 8.02 0.00 46.70 3.06
569 606 3.275617 AAAATGGAGGCATAGCGTACA 57.724 42.857 0.00 0.00 41.57 2.90
670 755 5.459505 TCATGGTAAACAAAGGAAAAGGGA 58.540 37.500 0.00 0.00 0.00 4.20
673 758 6.228616 TGGTAAACAAAGGAAAAGGGAAAG 57.771 37.500 0.00 0.00 0.00 2.62
676 761 6.984474 GGTAAACAAAGGAAAAGGGAAAGAAG 59.016 38.462 0.00 0.00 0.00 2.85
689 777 2.554462 GGAAAGAAGACCAAAGCCTGTC 59.446 50.000 0.00 0.00 0.00 3.51
706 809 4.060372 CAGTGCACTGAAGCAGCT 57.940 55.556 38.12 1.76 46.69 4.24
707 810 3.222053 CAGTGCACTGAAGCAGCTA 57.778 52.632 38.12 0.00 46.69 3.32
708 811 1.516161 CAGTGCACTGAAGCAGCTAA 58.484 50.000 38.12 0.00 46.69 3.09
709 812 1.463831 CAGTGCACTGAAGCAGCTAAG 59.536 52.381 38.12 9.48 46.69 2.18
710 813 0.167689 GTGCACTGAAGCAGCTAAGC 59.832 55.000 10.32 0.00 46.69 3.09
711 814 2.211952 GTGCACTGAAGCAGCTAAGCT 61.212 52.381 10.32 0.00 46.69 3.74
723 826 3.356529 AGCTAAGCTGCCATTGTTACT 57.643 42.857 0.00 0.00 37.57 2.24
724 827 3.012518 AGCTAAGCTGCCATTGTTACTG 58.987 45.455 0.00 0.00 37.57 2.74
725 828 2.749621 GCTAAGCTGCCATTGTTACTGT 59.250 45.455 0.00 0.00 0.00 3.55
726 829 3.191371 GCTAAGCTGCCATTGTTACTGTT 59.809 43.478 0.00 0.00 0.00 3.16
727 830 4.394920 GCTAAGCTGCCATTGTTACTGTTA 59.605 41.667 0.00 0.00 0.00 2.41
728 831 4.766404 AAGCTGCCATTGTTACTGTTAC 57.234 40.909 0.00 0.00 0.00 2.50
729 832 4.021102 AGCTGCCATTGTTACTGTTACT 57.979 40.909 0.00 0.00 0.00 2.24
730 833 5.160607 AGCTGCCATTGTTACTGTTACTA 57.839 39.130 0.00 0.00 0.00 1.82
731 834 5.745227 AGCTGCCATTGTTACTGTTACTAT 58.255 37.500 0.00 0.00 0.00 2.12
732 835 5.817816 AGCTGCCATTGTTACTGTTACTATC 59.182 40.000 0.00 0.00 0.00 2.08
733 836 5.584649 GCTGCCATTGTTACTGTTACTATCA 59.415 40.000 0.00 0.00 0.00 2.15
734 837 6.456988 GCTGCCATTGTTACTGTTACTATCAC 60.457 42.308 0.00 0.00 0.00 3.06
735 838 5.579119 TGCCATTGTTACTGTTACTATCACG 59.421 40.000 0.00 0.00 0.00 4.35
736 839 5.006358 GCCATTGTTACTGTTACTATCACGG 59.994 44.000 0.00 0.00 0.00 4.94
737 840 6.103997 CCATTGTTACTGTTACTATCACGGT 58.896 40.000 0.00 0.00 37.51 4.83
738 841 6.255020 CCATTGTTACTGTTACTATCACGGTC 59.745 42.308 0.00 0.00 35.32 4.79
772 3595 5.970023 GCTACCACTGTTACTGTTACTATCG 59.030 44.000 0.00 0.00 0.00 2.92
787 3610 0.658368 TATCGCGAGTCAGCTGTCTC 59.342 55.000 25.42 25.42 34.40 3.36
795 3618 2.433838 CAGCTGTCTCTGGGCACG 60.434 66.667 5.25 0.00 0.00 5.34
797 3620 3.695606 GCTGTCTCTGGGCACGGA 61.696 66.667 0.00 0.00 0.00 4.69
886 3854 4.719369 GCGTCCGCGTCTCTTGGT 62.719 66.667 4.92 0.00 40.81 3.67
887 3855 2.805353 CGTCCGCGTCTCTTGGTG 60.805 66.667 4.92 0.00 0.00 4.17
896 3864 1.154197 GTCTCTTGGTGTTTACGCCC 58.846 55.000 9.81 0.00 45.66 6.13
897 3865 0.759959 TCTCTTGGTGTTTACGCCCA 59.240 50.000 9.81 0.00 45.66 5.36
902 3884 1.228337 GGTGTTTACGCCCACCCTT 60.228 57.895 0.89 0.00 44.37 3.95
906 3888 1.162698 GTTTACGCCCACCCTTTCTC 58.837 55.000 0.00 0.00 0.00 2.87
954 3946 3.075005 TCCCGCCTTCCTTCTCCG 61.075 66.667 0.00 0.00 0.00 4.63
1006 4009 4.331968 CTCACTTCCTCACTACTCTCACT 58.668 47.826 0.00 0.00 0.00 3.41
1072 5575 1.001520 CAACCACACTACCATGGACGA 59.998 52.381 21.47 1.83 39.46 4.20
1082 5588 1.139734 CATGGACGAGGTGGAGTCG 59.860 63.158 0.00 0.00 43.25 4.18
1122 5634 2.891936 CGCTGCGCCATAAGCTGA 60.892 61.111 9.88 0.00 40.39 4.26
1409 5939 3.187700 CTGAATAGCGGTCCTTGTGTAC 58.812 50.000 0.00 0.00 0.00 2.90
1411 5941 1.563924 ATAGCGGTCCTTGTGTACCA 58.436 50.000 0.00 0.00 35.35 3.25
1423 5953 5.071788 TCCTTGTGTACCATTTGTCTCTCTT 59.928 40.000 0.00 0.00 0.00 2.85
1484 6027 1.975660 AAAAGCAGTTTACAGCCGGA 58.024 45.000 5.05 0.00 0.00 5.14
1498 6041 1.480219 GCCGGAGAAATCGTGTAGCG 61.480 60.000 5.05 0.00 43.01 4.26
1512 6055 0.100861 GTAGCGAGGTAGTGGCAGAC 59.899 60.000 0.00 0.00 30.77 3.51
1514 6057 1.153745 GCGAGGTAGTGGCAGACTG 60.154 63.158 0.00 0.00 35.96 3.51
1531 6074 3.645212 AGACTGGCAGTAGCATCATGTAT 59.355 43.478 22.11 0.00 44.61 2.29
1532 6075 3.993081 GACTGGCAGTAGCATCATGTATC 59.007 47.826 22.11 0.00 44.61 2.24
1538 6081 7.323420 TGGCAGTAGCATCATGTATCTATTAC 58.677 38.462 0.00 0.00 44.61 1.89
1539 6082 7.039082 TGGCAGTAGCATCATGTATCTATTACA 60.039 37.037 0.00 0.00 43.19 2.41
1540 6083 7.984050 GGCAGTAGCATCATGTATCTATTACAT 59.016 37.037 0.00 0.00 46.36 2.29
1575 6118 9.977762 GGAAATCAAGCAATCAATTTTAATGTC 57.022 29.630 0.00 0.00 0.00 3.06
1583 6126 4.647424 TCAATTTTAATGTCCCATCGGC 57.353 40.909 0.00 0.00 0.00 5.54
1612 6189 1.867233 CAAGGCAGCCGATACATGTAC 59.133 52.381 7.96 1.72 0.00 2.90
1613 6190 0.393077 AGGCAGCCGATACATGTACC 59.607 55.000 7.96 0.00 0.00 3.34
1614 6191 0.944311 GGCAGCCGATACATGTACCG 60.944 60.000 12.97 12.97 0.00 4.02
1615 6192 0.249322 GCAGCCGATACATGTACCGT 60.249 55.000 18.17 0.00 0.00 4.83
1616 6193 1.487482 CAGCCGATACATGTACCGTG 58.513 55.000 18.17 10.69 0.00 4.94
1617 6194 1.108776 AGCCGATACATGTACCGTGT 58.891 50.000 18.17 2.09 37.38 4.49
1618 6195 1.202371 AGCCGATACATGTACCGTGTG 60.202 52.381 18.17 4.56 35.12 3.82
1619 6196 1.202325 GCCGATACATGTACCGTGTGA 60.202 52.381 18.17 0.00 35.12 3.58
1620 6197 2.545113 GCCGATACATGTACCGTGTGAT 60.545 50.000 18.17 0.00 35.12 3.06
1621 6198 3.305964 CCGATACATGTACCGTGTGATC 58.694 50.000 18.17 5.04 35.12 2.92
1622 6199 3.243267 CCGATACATGTACCGTGTGATCA 60.243 47.826 18.17 0.00 35.12 2.92
1623 6200 4.546570 CGATACATGTACCGTGTGATCAT 58.453 43.478 11.70 0.00 35.12 2.45
1624 6201 4.617223 CGATACATGTACCGTGTGATCATC 59.383 45.833 11.70 0.00 35.12 2.92
1625 6202 5.562890 CGATACATGTACCGTGTGATCATCT 60.563 44.000 11.70 0.00 35.12 2.90
1626 6203 3.785486 ACATGTACCGTGTGATCATCTG 58.215 45.455 0.00 0.00 31.87 2.90
1638 6225 0.034059 ATCATCTGCGGTCGGGAATC 59.966 55.000 0.00 0.00 0.00 2.52
1639 6226 1.143838 CATCTGCGGTCGGGAATCA 59.856 57.895 0.00 0.00 0.00 2.57
1640 6227 0.250038 CATCTGCGGTCGGGAATCAT 60.250 55.000 0.00 0.00 0.00 2.45
1641 6228 0.034059 ATCTGCGGTCGGGAATCATC 59.966 55.000 0.00 0.00 0.00 2.92
1642 6229 1.043116 TCTGCGGTCGGGAATCATCT 61.043 55.000 0.00 0.00 0.00 2.90
1643 6230 0.877649 CTGCGGTCGGGAATCATCTG 60.878 60.000 0.00 0.00 0.00 2.90
1644 6231 2.247437 GCGGTCGGGAATCATCTGC 61.247 63.158 0.00 0.00 0.00 4.26
1647 6234 1.144057 GTCGGGAATCATCTGCGGT 59.856 57.895 0.00 0.00 0.00 5.68
1648 6235 0.876342 GTCGGGAATCATCTGCGGTC 60.876 60.000 0.00 0.00 0.00 4.79
1649 6236 1.951130 CGGGAATCATCTGCGGTCG 60.951 63.158 0.00 0.00 0.00 4.79
1650 6237 1.441729 GGGAATCATCTGCGGTCGA 59.558 57.895 0.00 0.00 0.00 4.20
1651 6238 0.876342 GGGAATCATCTGCGGTCGAC 60.876 60.000 7.13 7.13 0.00 4.20
1652 6239 0.179111 GGAATCATCTGCGGTCGACA 60.179 55.000 18.91 0.00 0.00 4.35
1653 6240 1.539065 GGAATCATCTGCGGTCGACAT 60.539 52.381 18.91 0.00 0.00 3.06
1654 6241 1.789464 GAATCATCTGCGGTCGACATC 59.211 52.381 18.91 8.60 0.00 3.06
1655 6242 0.032678 ATCATCTGCGGTCGACATCC 59.967 55.000 18.91 5.15 0.00 3.51
1656 6243 1.141665 CATCTGCGGTCGACATCCA 59.858 57.895 18.91 9.65 0.00 3.41
1657 6244 1.141881 ATCTGCGGTCGACATCCAC 59.858 57.895 18.91 1.77 0.00 4.02
1658 6245 2.298158 ATCTGCGGTCGACATCCACC 62.298 60.000 18.91 0.00 0.00 4.61
1666 6253 0.172578 TCGACATCCACCGTGTGATC 59.827 55.000 5.71 0.00 35.23 2.92
1677 6264 1.531149 CCGTGTGATCAACTGTGAACC 59.469 52.381 0.00 0.00 37.30 3.62
1686 6273 5.883115 TGATCAACTGTGAACCAAGTTTACA 59.117 36.000 0.00 5.18 39.16 2.41
1687 6274 5.554822 TCAACTGTGAACCAAGTTTACAC 57.445 39.130 1.40 0.00 37.17 2.90
1688 6275 5.250200 TCAACTGTGAACCAAGTTTACACT 58.750 37.500 1.40 0.00 37.17 3.55
1699 6286 2.661718 AGTTTACACTTGGGTTGGTGG 58.338 47.619 0.00 0.00 37.72 4.61
1700 6287 2.024751 AGTTTACACTTGGGTTGGTGGT 60.025 45.455 0.00 0.00 37.72 4.16
1701 6288 2.060050 TTACACTTGGGTTGGTGGTG 57.940 50.000 0.00 0.00 37.72 4.17
1702 6289 0.183971 TACACTTGGGTTGGTGGTGG 59.816 55.000 0.00 0.00 37.72 4.61
1715 6314 1.843851 GGTGGTGGGTGGAATCATCTA 59.156 52.381 0.00 0.00 0.00 1.98
1722 6321 1.679680 GGTGGAATCATCTACCGTCGA 59.320 52.381 0.00 0.00 45.79 4.20
1728 6334 2.343484 TCATCTACCGTCGACATCCT 57.657 50.000 17.16 0.00 0.00 3.24
1767 6373 2.900122 CCAACGATGGTACTGCAAAG 57.100 50.000 3.02 0.00 42.18 2.77
1768 6374 1.468520 CCAACGATGGTACTGCAAAGG 59.531 52.381 3.02 0.00 42.18 3.11
1769 6375 2.422597 CAACGATGGTACTGCAAAGGA 58.577 47.619 0.00 0.00 0.00 3.36
1770 6376 3.009723 CAACGATGGTACTGCAAAGGAT 58.990 45.455 0.00 0.00 0.00 3.24
1771 6377 3.350219 ACGATGGTACTGCAAAGGATT 57.650 42.857 0.00 0.00 0.00 3.01
1772 6378 4.481368 ACGATGGTACTGCAAAGGATTA 57.519 40.909 0.00 0.00 0.00 1.75
1773 6379 4.442706 ACGATGGTACTGCAAAGGATTAG 58.557 43.478 0.00 0.00 0.00 1.73
1774 6380 3.248602 CGATGGTACTGCAAAGGATTAGC 59.751 47.826 0.00 0.00 0.00 3.09
1775 6381 2.627945 TGGTACTGCAAAGGATTAGCG 58.372 47.619 0.00 0.00 0.00 4.26
1776 6382 2.235155 TGGTACTGCAAAGGATTAGCGA 59.765 45.455 0.00 0.00 0.00 4.93
1777 6383 2.866762 GGTACTGCAAAGGATTAGCGAG 59.133 50.000 0.00 0.00 0.00 5.03
1778 6384 2.770164 ACTGCAAAGGATTAGCGAGT 57.230 45.000 0.00 0.00 0.00 4.18
1779 6385 2.350522 ACTGCAAAGGATTAGCGAGTG 58.649 47.619 0.00 0.00 0.00 3.51
1780 6386 1.667724 CTGCAAAGGATTAGCGAGTGG 59.332 52.381 0.00 0.00 0.00 4.00
1781 6387 0.378610 GCAAAGGATTAGCGAGTGGC 59.621 55.000 0.00 0.00 44.05 5.01
1798 6404 4.992511 CGTTCGGTGGCGGGGAAA 62.993 66.667 0.00 0.00 0.00 3.13
1799 6405 3.359523 GTTCGGTGGCGGGGAAAC 61.360 66.667 0.00 0.00 0.00 2.78
1800 6406 3.562232 TTCGGTGGCGGGGAAACT 61.562 61.111 0.00 0.00 0.00 2.66
1801 6407 3.540367 TTCGGTGGCGGGGAAACTC 62.540 63.158 0.00 0.00 0.00 3.01
1802 6408 4.016706 CGGTGGCGGGGAAACTCT 62.017 66.667 0.00 0.00 0.00 3.24
1803 6409 2.359975 GGTGGCGGGGAAACTCTG 60.360 66.667 0.00 0.00 0.00 3.35
1804 6410 2.747686 GTGGCGGGGAAACTCTGA 59.252 61.111 0.00 0.00 0.00 3.27
1885 6491 2.543031 GCAGCTCACGGTTCGTCATATA 60.543 50.000 0.00 0.00 38.32 0.86
1921 6527 2.893404 GTGGCGTGTTCACGGTGT 60.893 61.111 23.27 0.00 0.00 4.16
1924 6530 1.300388 GGCGTGTTCACGGTGTAGT 60.300 57.895 23.27 0.00 0.00 2.73
1928 6535 0.677842 GTGTTCACGGTGTAGTCCCT 59.322 55.000 8.17 0.00 0.00 4.20
1947 6554 4.074970 CCCTGATTGCTCTTGTAGTGTTT 58.925 43.478 0.00 0.00 0.00 2.83
1968 6575 1.675219 GGTTAGGGCTGGACACGAA 59.325 57.895 0.00 0.00 0.00 3.85
1970 6577 0.320697 GTTAGGGCTGGACACGAACT 59.679 55.000 0.00 0.00 0.00 3.01
1999 6606 1.587043 CGAGTTCAGTCCGAGCCTGA 61.587 60.000 0.00 0.00 37.18 3.86
2017 6624 2.749621 CTGACTTTGGCTCGCCTAAAAT 59.250 45.455 9.65 0.00 36.94 1.82
2056 6663 2.169789 CGCTGGATGAACGAGCCTG 61.170 63.158 0.00 0.00 45.33 4.85
2057 6664 1.078848 GCTGGATGAACGAGCCTGT 60.079 57.895 0.00 0.00 43.00 4.00
2060 6667 2.935238 GCTGGATGAACGAGCCTGTTTA 60.935 50.000 0.00 0.00 43.00 2.01
2074 6681 2.356535 CCTGTTTATGGAGGCTCAGCTT 60.357 50.000 17.69 0.00 0.00 3.74
2168 6775 1.393539 GTGTAGTATGTGTGCTTGCGG 59.606 52.381 0.00 0.00 0.00 5.69
2223 8160 1.269309 CCTACTAGCAGCCGATGTGTC 60.269 57.143 0.00 0.00 0.00 3.67
2286 8651 3.603365 GCATGTAGTTGGGTGCCC 58.397 61.111 0.00 0.00 0.00 5.36
2296 8661 3.134127 GGGTGCCCGAGTCATTGC 61.134 66.667 0.00 0.00 0.00 3.56
2470 9009 0.250124 AAAGGGCATGTTCGTCGTCA 60.250 50.000 0.00 0.00 0.00 4.35
2540 9203 0.733223 GACAACGAGAAGGACGGCTC 60.733 60.000 0.00 0.00 34.93 4.70
2544 9207 2.185608 GAGAAGGACGGCTCCAGC 59.814 66.667 0.00 0.00 39.39 4.85
2563 9226 2.349755 GCCACGGCAGAAACCCTA 59.650 61.111 2.36 0.00 41.49 3.53
2564 9227 1.745489 GCCACGGCAGAAACCCTAG 60.745 63.158 2.36 0.00 41.49 3.02
2565 9228 1.745489 CCACGGCAGAAACCCTAGC 60.745 63.158 0.00 0.00 0.00 3.42
2566 9229 2.100631 CACGGCAGAAACCCTAGCG 61.101 63.158 0.00 0.00 0.00 4.26
2567 9230 2.511600 CGGCAGAAACCCTAGCGG 60.512 66.667 0.00 0.00 37.81 5.52
2568 9231 2.824489 GGCAGAAACCCTAGCGGC 60.824 66.667 0.00 0.00 33.26 6.53
2569 9232 2.046314 GCAGAAACCCTAGCGGCA 60.046 61.111 1.45 0.00 33.26 5.69
2570 9233 1.452108 GCAGAAACCCTAGCGGCAT 60.452 57.895 1.45 0.00 33.26 4.40
2571 9234 1.718757 GCAGAAACCCTAGCGGCATG 61.719 60.000 1.45 0.00 33.26 4.06
2572 9235 1.097547 CAGAAACCCTAGCGGCATGG 61.098 60.000 1.45 3.34 33.26 3.66
2573 9236 1.823899 GAAACCCTAGCGGCATGGG 60.824 63.158 22.98 22.98 46.07 4.00
2574 9237 2.265467 GAAACCCTAGCGGCATGGGA 62.265 60.000 28.76 0.00 43.47 4.37
2575 9238 2.552231 AAACCCTAGCGGCATGGGAC 62.552 60.000 28.76 0.00 43.47 4.46
2576 9239 4.256180 CCCTAGCGGCATGGGACC 62.256 72.222 20.99 0.00 43.47 4.46
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 6.513720 GCGTTGTGGACAAGGTTCTATAAAAA 60.514 38.462 12.42 0.00 42.02 1.94
14 15 5.049267 GCGTTGTGGACAAGGTTCTATAAAA 60.049 40.000 12.42 0.00 42.02 1.52
15 16 4.453136 GCGTTGTGGACAAGGTTCTATAAA 59.547 41.667 12.42 0.00 42.02 1.40
16 17 3.998341 GCGTTGTGGACAAGGTTCTATAA 59.002 43.478 12.42 0.00 42.02 0.98
17 18 3.259876 AGCGTTGTGGACAAGGTTCTATA 59.740 43.478 12.42 0.00 42.02 1.31
18 19 2.038557 AGCGTTGTGGACAAGGTTCTAT 59.961 45.455 12.42 0.00 42.02 1.98
19 20 1.414919 AGCGTTGTGGACAAGGTTCTA 59.585 47.619 12.42 0.00 42.02 2.10
20 21 0.180406 AGCGTTGTGGACAAGGTTCT 59.820 50.000 12.42 1.66 42.02 3.01
21 22 0.307760 CAGCGTTGTGGACAAGGTTC 59.692 55.000 12.42 0.00 42.02 3.62
22 23 0.107410 TCAGCGTTGTGGACAAGGTT 60.107 50.000 12.42 5.18 42.02 3.50
23 24 0.814010 GTCAGCGTTGTGGACAAGGT 60.814 55.000 12.42 2.23 42.02 3.50
24 25 1.507141 GGTCAGCGTTGTGGACAAGG 61.507 60.000 7.66 7.66 42.65 3.61
25 26 0.532862 AGGTCAGCGTTGTGGACAAG 60.533 55.000 0.00 0.00 36.39 3.16
26 27 0.753867 TAGGTCAGCGTTGTGGACAA 59.246 50.000 0.00 0.00 33.26 3.18
27 28 0.032952 GTAGGTCAGCGTTGTGGACA 59.967 55.000 0.00 0.00 33.26 4.02
28 29 0.032952 TGTAGGTCAGCGTTGTGGAC 59.967 55.000 0.00 0.00 0.00 4.02
29 30 0.973632 ATGTAGGTCAGCGTTGTGGA 59.026 50.000 0.00 0.00 0.00 4.02
30 31 1.078709 CATGTAGGTCAGCGTTGTGG 58.921 55.000 0.00 0.00 0.00 4.17
31 32 0.443869 GCATGTAGGTCAGCGTTGTG 59.556 55.000 0.00 0.00 0.00 3.33
32 33 0.034756 TGCATGTAGGTCAGCGTTGT 59.965 50.000 0.00 0.00 0.00 3.32
33 34 0.723414 CTGCATGTAGGTCAGCGTTG 59.277 55.000 2.35 0.00 0.00 4.10
34 35 0.608130 TCTGCATGTAGGTCAGCGTT 59.392 50.000 11.15 0.00 0.00 4.84
35 36 0.174389 CTCTGCATGTAGGTCAGCGT 59.826 55.000 11.15 0.00 0.00 5.07
36 37 1.150567 GCTCTGCATGTAGGTCAGCG 61.151 60.000 11.15 0.00 0.00 5.18
37 38 0.107993 TGCTCTGCATGTAGGTCAGC 60.108 55.000 11.15 12.66 31.71 4.26
38 39 1.472904 CCTGCTCTGCATGTAGGTCAG 60.473 57.143 18.78 18.78 38.13 3.51
39 40 0.538584 CCTGCTCTGCATGTAGGTCA 59.461 55.000 11.15 8.10 38.13 4.02
40 41 0.826715 TCCTGCTCTGCATGTAGGTC 59.173 55.000 18.40 3.89 38.13 3.85
41 42 1.504912 ATCCTGCTCTGCATGTAGGT 58.495 50.000 18.40 7.93 38.13 3.08
42 43 2.219458 CAATCCTGCTCTGCATGTAGG 58.781 52.381 11.15 14.76 38.13 3.18
43 44 1.602851 GCAATCCTGCTCTGCATGTAG 59.397 52.381 4.14 4.14 45.74 2.74
44 45 1.671979 GCAATCCTGCTCTGCATGTA 58.328 50.000 0.00 0.00 45.74 2.29
45 46 2.490165 GCAATCCTGCTCTGCATGT 58.510 52.632 0.00 0.00 45.74 3.21
55 56 0.524862 GTGAGGCTGTTGCAATCCTG 59.475 55.000 18.60 6.18 41.91 3.86
56 57 0.403271 AGTGAGGCTGTTGCAATCCT 59.597 50.000 15.02 15.02 41.91 3.24
57 58 0.524862 CAGTGAGGCTGTTGCAATCC 59.475 55.000 0.59 4.78 41.91 3.01
58 59 1.527034 TCAGTGAGGCTGTTGCAATC 58.473 50.000 0.59 0.00 45.23 2.67
59 60 1.884579 CTTCAGTGAGGCTGTTGCAAT 59.115 47.619 0.59 0.00 45.23 3.56
60 61 1.311859 CTTCAGTGAGGCTGTTGCAA 58.688 50.000 0.00 0.00 45.23 4.08
61 62 1.168407 GCTTCAGTGAGGCTGTTGCA 61.168 55.000 19.26 0.00 45.23 4.08
62 63 1.168407 TGCTTCAGTGAGGCTGTTGC 61.168 55.000 25.49 8.61 45.23 4.17
63 64 1.467734 GATGCTTCAGTGAGGCTGTTG 59.532 52.381 25.49 0.00 45.23 3.33
64 65 1.612726 GGATGCTTCAGTGAGGCTGTT 60.613 52.381 25.49 12.15 45.23 3.16
65 66 0.035630 GGATGCTTCAGTGAGGCTGT 60.036 55.000 25.49 15.41 45.23 4.40
66 67 1.088340 CGGATGCTTCAGTGAGGCTG 61.088 60.000 25.49 10.88 46.34 4.85
67 68 1.220206 CGGATGCTTCAGTGAGGCT 59.780 57.895 25.49 12.76 35.64 4.58
68 69 1.078848 ACGGATGCTTCAGTGAGGC 60.079 57.895 19.67 19.67 35.17 4.70
69 70 0.460987 GGACGGATGCTTCAGTGAGG 60.461 60.000 10.02 0.00 29.89 3.86
70 71 0.803768 CGGACGGATGCTTCAGTGAG 60.804 60.000 10.02 0.88 29.89 3.51
71 72 1.215382 CGGACGGATGCTTCAGTGA 59.785 57.895 10.02 0.00 29.89 3.41
72 73 0.179100 ATCGGACGGATGCTTCAGTG 60.179 55.000 10.02 0.00 32.92 3.66
73 74 0.103208 GATCGGACGGATGCTTCAGT 59.897 55.000 5.09 5.09 34.82 3.41
74 75 0.936764 CGATCGGACGGATGCTTCAG 60.937 60.000 7.38 0.00 34.82 3.02
75 76 1.065764 CGATCGGACGGATGCTTCA 59.934 57.895 7.38 0.00 34.82 3.02
76 77 0.527817 AACGATCGGACGGATGCTTC 60.528 55.000 20.98 0.00 34.82 3.86
77 78 0.527817 GAACGATCGGACGGATGCTT 60.528 55.000 20.98 0.29 34.82 3.91
78 79 1.065928 GAACGATCGGACGGATGCT 59.934 57.895 20.98 0.00 34.82 3.79
79 80 2.293627 CGAACGATCGGACGGATGC 61.294 63.158 20.98 0.00 45.32 3.91
80 81 3.903646 CGAACGATCGGACGGATG 58.096 61.111 20.98 0.00 45.32 3.51
96 97 1.836383 CCTCCCTTTATCGACGAACG 58.164 55.000 0.00 0.00 44.09 3.95
97 98 1.134907 TGCCTCCCTTTATCGACGAAC 60.135 52.381 0.00 0.00 0.00 3.95
98 99 1.134907 GTGCCTCCCTTTATCGACGAA 60.135 52.381 0.00 0.00 0.00 3.85
99 100 0.458669 GTGCCTCCCTTTATCGACGA 59.541 55.000 0.00 0.00 0.00 4.20
100 101 0.460311 AGTGCCTCCCTTTATCGACG 59.540 55.000 0.00 0.00 0.00 5.12
101 102 1.480954 TGAGTGCCTCCCTTTATCGAC 59.519 52.381 0.00 0.00 0.00 4.20
102 103 1.480954 GTGAGTGCCTCCCTTTATCGA 59.519 52.381 0.00 0.00 0.00 3.59
103 104 1.207089 TGTGAGTGCCTCCCTTTATCG 59.793 52.381 0.50 0.00 0.00 2.92
104 105 2.501723 TCTGTGAGTGCCTCCCTTTATC 59.498 50.000 0.50 0.00 0.00 1.75
105 106 2.551270 TCTGTGAGTGCCTCCCTTTAT 58.449 47.619 0.50 0.00 0.00 1.40
106 107 2.024176 TCTGTGAGTGCCTCCCTTTA 57.976 50.000 0.50 0.00 0.00 1.85
107 108 1.072965 CTTCTGTGAGTGCCTCCCTTT 59.927 52.381 0.50 0.00 0.00 3.11
108 109 0.689623 CTTCTGTGAGTGCCTCCCTT 59.310 55.000 0.50 0.00 0.00 3.95
109 110 1.197430 CCTTCTGTGAGTGCCTCCCT 61.197 60.000 0.50 0.00 0.00 4.20
110 111 1.194781 TCCTTCTGTGAGTGCCTCCC 61.195 60.000 0.50 0.00 0.00 4.30
111 112 0.248843 CTCCTTCTGTGAGTGCCTCC 59.751 60.000 0.50 0.00 0.00 4.30
112 113 0.390998 GCTCCTTCTGTGAGTGCCTC 60.391 60.000 0.00 0.00 32.31 4.70
113 114 0.835543 AGCTCCTTCTGTGAGTGCCT 60.836 55.000 0.00 0.00 32.31 4.75
114 115 0.390998 GAGCTCCTTCTGTGAGTGCC 60.391 60.000 0.87 0.00 32.31 5.01
115 116 0.319728 TGAGCTCCTTCTGTGAGTGC 59.680 55.000 12.15 0.00 32.31 4.40
116 117 1.067000 CCTGAGCTCCTTCTGTGAGTG 60.067 57.143 12.15 0.00 32.31 3.51
117 118 1.265236 CCTGAGCTCCTTCTGTGAGT 58.735 55.000 12.15 0.00 32.31 3.41
118 119 0.536260 CCCTGAGCTCCTTCTGTGAG 59.464 60.000 12.15 0.00 0.00 3.51
119 120 0.178921 ACCCTGAGCTCCTTCTGTGA 60.179 55.000 12.15 0.00 0.00 3.58
120 121 0.248843 GACCCTGAGCTCCTTCTGTG 59.751 60.000 12.15 0.00 0.00 3.66
121 122 0.907230 GGACCCTGAGCTCCTTCTGT 60.907 60.000 12.15 1.05 0.00 3.41
122 123 1.904032 GGACCCTGAGCTCCTTCTG 59.096 63.158 12.15 0.00 0.00 3.02
123 124 1.684049 CGGACCCTGAGCTCCTTCT 60.684 63.158 12.15 0.00 0.00 2.85
124 125 2.726351 CCGGACCCTGAGCTCCTTC 61.726 68.421 12.15 1.87 0.00 3.46
125 126 2.685380 CCGGACCCTGAGCTCCTT 60.685 66.667 12.15 0.00 0.00 3.36
128 129 4.154347 CTGCCGGACCCTGAGCTC 62.154 72.222 5.05 6.82 0.00 4.09
173 174 0.949105 ATTCGACAACGGTGGTGAGC 60.949 55.000 4.97 0.00 40.21 4.26
174 175 0.790207 CATTCGACAACGGTGGTGAG 59.210 55.000 4.97 0.00 40.21 3.51
175 176 0.105224 ACATTCGACAACGGTGGTGA 59.895 50.000 4.97 0.00 40.21 4.02
176 177 0.511221 GACATTCGACAACGGTGGTG 59.489 55.000 4.97 0.00 40.21 4.17
177 178 0.105224 TGACATTCGACAACGGTGGT 59.895 50.000 4.97 0.00 40.21 4.16
178 179 1.128507 CATGACATTCGACAACGGTGG 59.871 52.381 4.97 0.00 40.21 4.61
179 180 1.128507 CCATGACATTCGACAACGGTG 59.871 52.381 0.00 0.00 40.21 4.94
180 181 1.438651 CCATGACATTCGACAACGGT 58.561 50.000 0.00 0.00 40.21 4.83
181 182 0.096976 GCCATGACATTCGACAACGG 59.903 55.000 0.00 0.00 40.21 4.44
182 183 1.078709 AGCCATGACATTCGACAACG 58.921 50.000 0.00 0.00 41.26 4.10
183 184 4.882671 ATAAGCCATGACATTCGACAAC 57.117 40.909 0.00 0.00 0.00 3.32
184 185 5.895636 AAATAAGCCATGACATTCGACAA 57.104 34.783 0.00 0.00 0.00 3.18
185 186 5.182950 ACAAAATAAGCCATGACATTCGACA 59.817 36.000 0.00 0.00 0.00 4.35
186 187 5.512788 CACAAAATAAGCCATGACATTCGAC 59.487 40.000 0.00 0.00 0.00 4.20
187 188 5.639757 CACAAAATAAGCCATGACATTCGA 58.360 37.500 0.00 0.00 0.00 3.71
188 189 4.266029 GCACAAAATAAGCCATGACATTCG 59.734 41.667 0.00 0.00 0.00 3.34
189 190 5.413499 AGCACAAAATAAGCCATGACATTC 58.587 37.500 0.00 0.00 0.00 2.67
190 191 5.186409 AGAGCACAAAATAAGCCATGACATT 59.814 36.000 0.00 0.00 0.00 2.71
191 192 4.708421 AGAGCACAAAATAAGCCATGACAT 59.292 37.500 0.00 0.00 0.00 3.06
192 193 4.081406 AGAGCACAAAATAAGCCATGACA 58.919 39.130 0.00 0.00 0.00 3.58
193 194 4.397417 AGAGAGCACAAAATAAGCCATGAC 59.603 41.667 0.00 0.00 0.00 3.06
194 195 4.397103 CAGAGAGCACAAAATAAGCCATGA 59.603 41.667 0.00 0.00 0.00 3.07
195 196 4.439700 CCAGAGAGCACAAAATAAGCCATG 60.440 45.833 0.00 0.00 0.00 3.66
196 197 3.698040 CCAGAGAGCACAAAATAAGCCAT 59.302 43.478 0.00 0.00 0.00 4.40
197 198 3.084039 CCAGAGAGCACAAAATAAGCCA 58.916 45.455 0.00 0.00 0.00 4.75
198 199 2.159324 GCCAGAGAGCACAAAATAAGCC 60.159 50.000 0.00 0.00 0.00 4.35
199 200 2.159324 GGCCAGAGAGCACAAAATAAGC 60.159 50.000 0.00 0.00 0.00 3.09
200 201 3.084039 TGGCCAGAGAGCACAAAATAAG 58.916 45.455 0.00 0.00 0.00 1.73
201 202 3.084039 CTGGCCAGAGAGCACAAAATAA 58.916 45.455 29.88 0.00 0.00 1.40
202 203 2.715046 CTGGCCAGAGAGCACAAAATA 58.285 47.619 29.88 0.00 0.00 1.40
203 204 1.542492 CTGGCCAGAGAGCACAAAAT 58.458 50.000 29.88 0.00 0.00 1.82
204 205 1.174712 GCTGGCCAGAGAGCACAAAA 61.175 55.000 37.21 0.00 35.15 2.44
205 206 1.601759 GCTGGCCAGAGAGCACAAA 60.602 57.895 37.21 0.00 35.15 2.83
206 207 2.033141 GCTGGCCAGAGAGCACAA 59.967 61.111 37.21 0.00 35.15 3.33
207 208 4.025858 GGCTGGCCAGAGAGCACA 62.026 66.667 37.21 0.00 36.90 4.57
208 209 4.792804 GGGCTGGCCAGAGAGCAC 62.793 72.222 37.21 19.78 36.90 4.40
210 211 4.039092 TTGGGCTGGCCAGAGAGC 62.039 66.667 37.21 21.65 37.98 4.09
211 212 2.045536 GTTGGGCTGGCCAGAGAG 60.046 66.667 37.21 11.65 37.98 3.20
212 213 1.719063 AAAGTTGGGCTGGCCAGAGA 61.719 55.000 37.21 15.76 37.98 3.10
213 214 0.829182 AAAAGTTGGGCTGGCCAGAG 60.829 55.000 37.21 12.94 37.98 3.35
214 215 0.827507 GAAAAGTTGGGCTGGCCAGA 60.828 55.000 37.21 13.40 37.98 3.86
215 216 0.829182 AGAAAAGTTGGGCTGGCCAG 60.829 55.000 29.34 29.34 37.98 4.85
216 217 0.398381 AAGAAAAGTTGGGCTGGCCA 60.398 50.000 20.19 20.19 37.98 5.36
217 218 0.758734 AAAGAAAAGTTGGGCTGGCC 59.241 50.000 14.23 14.23 0.00 5.36
218 219 2.212652 CAAAAGAAAAGTTGGGCTGGC 58.787 47.619 0.00 0.00 0.00 4.85
219 220 3.541996 ACAAAAGAAAAGTTGGGCTGG 57.458 42.857 0.00 0.00 0.00 4.85
220 221 4.051237 GCTACAAAAGAAAAGTTGGGCTG 58.949 43.478 0.00 0.00 0.00 4.85
221 222 3.960755 AGCTACAAAAGAAAAGTTGGGCT 59.039 39.130 0.00 0.00 35.02 5.19
222 223 4.322080 AGCTACAAAAGAAAAGTTGGGC 57.678 40.909 0.00 0.00 0.00 5.36
223 224 4.976116 CGAAGCTACAAAAGAAAAGTTGGG 59.024 41.667 0.00 0.00 0.00 4.12
247 248 1.520342 GCGAGCTTCAGCCTAGTGG 60.520 63.158 0.00 0.00 43.38 4.00
248 249 4.100981 GCGAGCTTCAGCCTAGTG 57.899 61.111 0.00 0.00 43.38 2.74
254 255 1.301322 GGATAGGGCGAGCTTCAGC 60.301 63.158 0.00 0.00 42.49 4.26
255 256 1.271102 GTAGGATAGGGCGAGCTTCAG 59.729 57.143 0.00 0.00 0.00 3.02
256 257 1.133450 AGTAGGATAGGGCGAGCTTCA 60.133 52.381 0.00 0.00 0.00 3.02
257 258 1.542472 GAGTAGGATAGGGCGAGCTTC 59.458 57.143 0.00 0.00 0.00 3.86
258 259 1.146152 AGAGTAGGATAGGGCGAGCTT 59.854 52.381 0.00 0.00 0.00 3.74
259 260 0.774908 AGAGTAGGATAGGGCGAGCT 59.225 55.000 0.00 0.00 0.00 4.09
260 261 2.361789 CTAGAGTAGGATAGGGCGAGC 58.638 57.143 0.00 0.00 0.00 5.03
261 262 2.290387 TGCTAGAGTAGGATAGGGCGAG 60.290 54.545 0.00 0.00 0.00 5.03
262 263 1.703513 TGCTAGAGTAGGATAGGGCGA 59.296 52.381 0.00 0.00 0.00 5.54
263 264 2.201921 TGCTAGAGTAGGATAGGGCG 57.798 55.000 0.00 0.00 0.00 6.13
264 265 3.835395 ACAATGCTAGAGTAGGATAGGGC 59.165 47.826 0.00 0.00 35.68 5.19
265 266 6.249951 AGTACAATGCTAGAGTAGGATAGGG 58.750 44.000 0.00 0.00 35.68 3.53
266 267 6.376018 GGAGTACAATGCTAGAGTAGGATAGG 59.624 46.154 0.00 0.00 35.68 2.57
267 268 7.172342 AGGAGTACAATGCTAGAGTAGGATAG 58.828 42.308 0.00 0.00 35.68 2.08
268 269 7.092748 AGGAGTACAATGCTAGAGTAGGATA 57.907 40.000 0.00 0.00 35.68 2.59
269 270 5.959512 AGGAGTACAATGCTAGAGTAGGAT 58.040 41.667 0.00 0.00 38.59 3.24
270 271 5.390087 AGGAGTACAATGCTAGAGTAGGA 57.610 43.478 0.00 0.00 0.00 2.94
271 272 6.205853 CAGTAGGAGTACAATGCTAGAGTAGG 59.794 46.154 0.00 0.00 0.00 3.18
272 273 6.293735 GCAGTAGGAGTACAATGCTAGAGTAG 60.294 46.154 0.00 0.00 30.95 2.57
273 274 5.531659 GCAGTAGGAGTACAATGCTAGAGTA 59.468 44.000 0.00 0.00 30.95 2.59
274 275 4.339814 GCAGTAGGAGTACAATGCTAGAGT 59.660 45.833 0.00 0.00 30.95 3.24
275 276 4.582656 AGCAGTAGGAGTACAATGCTAGAG 59.417 45.833 4.29 0.00 38.34 2.43
276 277 4.339530 CAGCAGTAGGAGTACAATGCTAGA 59.660 45.833 5.67 0.00 38.16 2.43
277 278 4.098654 ACAGCAGTAGGAGTACAATGCTAG 59.901 45.833 5.67 4.25 38.16 3.42
278 279 4.023980 ACAGCAGTAGGAGTACAATGCTA 58.976 43.478 5.67 0.00 38.16 3.49
279 280 2.834549 ACAGCAGTAGGAGTACAATGCT 59.165 45.455 0.54 0.54 39.87 3.79
280 281 3.252974 ACAGCAGTAGGAGTACAATGC 57.747 47.619 0.00 0.00 32.82 3.56
281 282 4.095932 TCGTACAGCAGTAGGAGTACAATG 59.904 45.833 7.49 0.00 39.46 2.82
282 283 4.267536 TCGTACAGCAGTAGGAGTACAAT 58.732 43.478 7.49 0.00 39.46 2.71
283 284 3.678289 TCGTACAGCAGTAGGAGTACAA 58.322 45.455 7.49 0.00 39.46 2.41
284 285 3.339253 TCGTACAGCAGTAGGAGTACA 57.661 47.619 7.49 0.00 39.46 2.90
285 286 6.873076 AGTATATCGTACAGCAGTAGGAGTAC 59.127 42.308 15.44 17.45 45.19 2.73
286 287 7.002250 AGTATATCGTACAGCAGTAGGAGTA 57.998 40.000 15.44 9.26 45.19 2.59
287 288 5.867330 AGTATATCGTACAGCAGTAGGAGT 58.133 41.667 15.44 10.04 45.19 3.85
288 289 7.549842 ACATAGTATATCGTACAGCAGTAGGAG 59.450 40.741 15.44 4.18 45.19 3.69
289 290 7.333672 CACATAGTATATCGTACAGCAGTAGGA 59.666 40.741 13.10 13.10 45.80 2.94
290 291 7.465173 CACATAGTATATCGTACAGCAGTAGG 58.535 42.308 2.82 2.82 37.43 3.18
291 292 6.962116 GCACATAGTATATCGTACAGCAGTAG 59.038 42.308 0.00 0.00 0.00 2.57
292 293 6.428771 TGCACATAGTATATCGTACAGCAGTA 59.571 38.462 0.00 0.00 0.00 2.74
293 294 5.240844 TGCACATAGTATATCGTACAGCAGT 59.759 40.000 0.00 0.00 0.00 4.40
294 295 5.699839 TGCACATAGTATATCGTACAGCAG 58.300 41.667 0.00 0.00 0.00 4.24
295 296 5.699097 TGCACATAGTATATCGTACAGCA 57.301 39.130 0.00 0.00 0.00 4.41
296 297 6.035005 CCAATGCACATAGTATATCGTACAGC 59.965 42.308 0.00 0.00 0.00 4.40
297 298 6.531594 CCCAATGCACATAGTATATCGTACAG 59.468 42.308 0.00 0.00 0.00 2.74
298 299 6.394809 CCCAATGCACATAGTATATCGTACA 58.605 40.000 0.00 0.00 0.00 2.90
299 300 5.291128 GCCCAATGCACATAGTATATCGTAC 59.709 44.000 0.00 0.00 40.77 3.67
300 301 5.416083 GCCCAATGCACATAGTATATCGTA 58.584 41.667 0.00 0.00 40.77 3.43
301 302 4.253685 GCCCAATGCACATAGTATATCGT 58.746 43.478 0.00 0.00 40.77 3.73
302 303 3.306973 CGCCCAATGCACATAGTATATCG 59.693 47.826 0.00 0.00 41.33 2.92
303 304 3.063997 GCGCCCAATGCACATAGTATATC 59.936 47.826 0.00 0.00 41.33 1.63
304 305 3.009723 GCGCCCAATGCACATAGTATAT 58.990 45.455 0.00 0.00 41.33 0.86
305 306 2.224402 TGCGCCCAATGCACATAGTATA 60.224 45.455 4.18 0.00 41.33 1.47
306 307 1.238439 GCGCCCAATGCACATAGTAT 58.762 50.000 0.00 0.00 41.33 2.12
307 308 0.107459 TGCGCCCAATGCACATAGTA 60.107 50.000 4.18 0.00 41.33 1.82
308 309 0.752743 ATGCGCCCAATGCACATAGT 60.753 50.000 4.18 0.00 46.57 2.12
309 310 0.318360 CATGCGCCCAATGCACATAG 60.318 55.000 4.18 0.00 46.57 2.23
310 311 1.734748 CATGCGCCCAATGCACATA 59.265 52.632 4.18 0.00 46.57 2.29
311 312 2.497293 CATGCGCCCAATGCACAT 59.503 55.556 4.18 0.00 46.57 3.21
312 313 3.761140 CCATGCGCCCAATGCACA 61.761 61.111 4.18 0.00 46.57 4.57
313 314 3.004326 TTCCATGCGCCCAATGCAC 62.004 57.895 4.18 0.00 46.57 4.57
315 316 2.202783 GTTCCATGCGCCCAATGC 60.203 61.111 4.18 0.00 0.00 3.56
316 317 1.153784 GTGTTCCATGCGCCCAATG 60.154 57.895 4.18 1.32 0.00 2.82
317 318 2.699768 CGTGTTCCATGCGCCCAAT 61.700 57.895 4.18 0.00 0.00 3.16
318 319 3.361158 CGTGTTCCATGCGCCCAA 61.361 61.111 4.18 0.00 0.00 4.12
324 325 4.101790 CCCGTGCGTGTTCCATGC 62.102 66.667 1.52 1.52 45.53 4.06
325 326 1.745115 ATCCCGTGCGTGTTCCATG 60.745 57.895 0.00 0.00 0.00 3.66
326 327 1.745115 CATCCCGTGCGTGTTCCAT 60.745 57.895 0.00 0.00 0.00 3.41
327 328 2.358125 CATCCCGTGCGTGTTCCA 60.358 61.111 0.00 0.00 0.00 3.53
328 329 2.358247 ACATCCCGTGCGTGTTCC 60.358 61.111 0.00 0.00 0.00 3.62
329 330 0.949105 AAGACATCCCGTGCGTGTTC 60.949 55.000 0.00 0.00 0.00 3.18
330 331 1.070786 AAGACATCCCGTGCGTGTT 59.929 52.632 0.00 0.00 0.00 3.32
331 332 1.667830 CAAGACATCCCGTGCGTGT 60.668 57.895 0.00 0.00 0.00 4.49
332 333 1.667830 ACAAGACATCCCGTGCGTG 60.668 57.895 0.00 0.00 0.00 5.34
333 334 1.667830 CACAAGACATCCCGTGCGT 60.668 57.895 0.00 0.00 0.00 5.24
334 335 3.027170 GCACAAGACATCCCGTGCG 62.027 63.158 7.32 0.00 44.54 5.34
335 336 2.870372 GCACAAGACATCCCGTGC 59.130 61.111 7.32 7.32 46.85 5.34
336 337 1.667830 ACGCACAAGACATCCCGTG 60.668 57.895 0.00 0.00 0.00 4.94
337 338 1.667830 CACGCACAAGACATCCCGT 60.668 57.895 0.00 0.00 0.00 5.28
338 339 1.227999 AACACGCACAAGACATCCCG 61.228 55.000 0.00 0.00 0.00 5.14
339 340 0.238289 CAACACGCACAAGACATCCC 59.762 55.000 0.00 0.00 0.00 3.85
340 341 0.944386 ACAACACGCACAAGACATCC 59.056 50.000 0.00 0.00 0.00 3.51
341 342 1.330521 ACACAACACGCACAAGACATC 59.669 47.619 0.00 0.00 0.00 3.06
342 343 1.378531 ACACAACACGCACAAGACAT 58.621 45.000 0.00 0.00 0.00 3.06
343 344 1.135831 CAACACAACACGCACAAGACA 60.136 47.619 0.00 0.00 0.00 3.41
344 345 1.534028 CAACACAACACGCACAAGAC 58.466 50.000 0.00 0.00 0.00 3.01
345 346 0.449786 CCAACACAACACGCACAAGA 59.550 50.000 0.00 0.00 0.00 3.02
346 347 0.170116 ACCAACACAACACGCACAAG 59.830 50.000 0.00 0.00 0.00 3.16
347 348 0.598562 AACCAACACAACACGCACAA 59.401 45.000 0.00 0.00 0.00 3.33
348 349 0.109551 CAACCAACACAACACGCACA 60.110 50.000 0.00 0.00 0.00 4.57
349 350 1.409982 GCAACCAACACAACACGCAC 61.410 55.000 0.00 0.00 0.00 5.34
350 351 1.153939 GCAACCAACACAACACGCA 60.154 52.632 0.00 0.00 0.00 5.24
351 352 0.457681 AAGCAACCAACACAACACGC 60.458 50.000 0.00 0.00 0.00 5.34
352 353 1.544686 GAAGCAACCAACACAACACG 58.455 50.000 0.00 0.00 0.00 4.49
353 354 1.797348 CGGAAGCAACCAACACAACAC 60.797 52.381 0.00 0.00 0.00 3.32
354 355 0.453793 CGGAAGCAACCAACACAACA 59.546 50.000 0.00 0.00 0.00 3.33
355 356 3.250220 CGGAAGCAACCAACACAAC 57.750 52.632 0.00 0.00 0.00 3.32
368 369 2.579787 CGACGTAGCCTGCGGAAG 60.580 66.667 7.22 0.00 0.00 3.46
369 370 3.047718 CTCGACGTAGCCTGCGGAA 62.048 63.158 7.22 0.00 0.00 4.30
370 371 3.506096 CTCGACGTAGCCTGCGGA 61.506 66.667 7.22 0.00 0.00 5.54
371 372 4.554363 CCTCGACGTAGCCTGCGG 62.554 72.222 7.22 0.00 0.00 5.69
372 373 4.554363 CCCTCGACGTAGCCTGCG 62.554 72.222 0.00 0.00 0.00 5.18
373 374 4.874977 GCCCTCGACGTAGCCTGC 62.875 72.222 0.00 0.00 0.00 4.85
374 375 4.208686 GGCCCTCGACGTAGCCTG 62.209 72.222 15.16 0.00 42.34 4.85
377 378 3.204827 TACGGCCCTCGACGTAGC 61.205 66.667 0.00 0.00 43.79 3.58
378 379 2.711924 GTACGGCCCTCGACGTAG 59.288 66.667 6.29 0.00 44.98 3.51
379 380 3.195002 CGTACGGCCCTCGACGTA 61.195 66.667 7.57 2.28 43.79 3.57
381 382 4.527157 GTCGTACGGCCCTCGACG 62.527 72.222 16.52 14.23 42.84 5.12
383 384 3.434319 GTGTCGTACGGCCCTCGA 61.434 66.667 18.57 1.83 42.43 4.04
384 385 2.752322 TTTGTGTCGTACGGCCCTCG 62.752 60.000 18.57 0.00 45.88 4.63
385 386 0.600782 TTTTGTGTCGTACGGCCCTC 60.601 55.000 18.57 8.53 0.00 4.30
386 387 0.881600 GTTTTGTGTCGTACGGCCCT 60.882 55.000 18.57 0.00 0.00 5.19
398 399 0.249280 GCCGGGTGAAAGGTTTTGTG 60.249 55.000 2.18 0.00 0.00 3.33
401 402 2.197605 CGGCCGGGTGAAAGGTTTT 61.198 57.895 20.10 0.00 0.00 2.43
452 455 1.024271 CACGGCCGAATTGATGGATT 58.976 50.000 35.90 0.00 0.00 3.01
460 463 2.325082 GCAGTGACACGGCCGAATT 61.325 57.895 35.90 15.56 33.12 2.17
486 490 4.622701 AGCACTGACACTTCTTCAAAAC 57.377 40.909 0.00 0.00 0.00 2.43
488 492 5.643379 AAAAGCACTGACACTTCTTCAAA 57.357 34.783 0.00 0.00 0.00 2.69
491 495 6.959361 TGATAAAAAGCACTGACACTTCTTC 58.041 36.000 0.00 0.00 0.00 2.87
492 496 6.942532 TGATAAAAAGCACTGACACTTCTT 57.057 33.333 0.00 0.00 0.00 2.52
493 497 6.488006 ACATGATAAAAAGCACTGACACTTCT 59.512 34.615 0.00 0.00 0.00 2.85
494 498 6.672147 ACATGATAAAAAGCACTGACACTTC 58.328 36.000 0.00 0.00 0.00 3.01
495 499 6.639632 ACATGATAAAAAGCACTGACACTT 57.360 33.333 0.00 0.00 0.00 3.16
496 500 6.488006 AGAACATGATAAAAAGCACTGACACT 59.512 34.615 0.00 0.00 0.00 3.55
518 541 0.516877 CCGCGTCATGCAGAAAAGAA 59.483 50.000 4.92 0.00 46.97 2.52
533 564 3.180980 CCATTTTACATACTACGTCCGCG 59.819 47.826 0.00 0.00 44.93 6.46
537 571 5.353938 TGCCTCCATTTTACATACTACGTC 58.646 41.667 0.00 0.00 0.00 4.34
546 580 3.275617 ACGCTATGCCTCCATTTTACA 57.724 42.857 0.00 0.00 32.85 2.41
550 584 3.403038 GATGTACGCTATGCCTCCATTT 58.597 45.455 0.00 0.00 32.85 2.32
569 606 0.599466 CATCTGATGCTCACGCGGAT 60.599 55.000 12.47 0.00 39.65 4.18
670 755 3.217626 CTGACAGGCTTTGGTCTTCTTT 58.782 45.455 5.24 0.00 35.11 2.52
673 758 1.876156 CACTGACAGGCTTTGGTCTTC 59.124 52.381 7.51 0.00 35.11 2.87
676 761 0.819259 TGCACTGACAGGCTTTGGTC 60.819 55.000 7.51 0.00 34.63 4.02
689 777 1.463831 CTTAGCTGCTTCAGTGCACTG 59.536 52.381 36.07 36.07 45.08 3.66
703 806 3.012518 CAGTAACAATGGCAGCTTAGCT 58.987 45.455 0.00 0.00 40.77 3.32
704 807 2.749621 ACAGTAACAATGGCAGCTTAGC 59.250 45.455 0.00 0.00 0.00 3.09
705 808 5.643777 AGTAACAGTAACAATGGCAGCTTAG 59.356 40.000 0.00 0.00 0.00 2.18
706 809 5.556915 AGTAACAGTAACAATGGCAGCTTA 58.443 37.500 0.00 0.00 0.00 3.09
707 810 4.398319 AGTAACAGTAACAATGGCAGCTT 58.602 39.130 0.00 0.00 0.00 3.74
708 811 4.021102 AGTAACAGTAACAATGGCAGCT 57.979 40.909 0.00 0.00 0.00 4.24
709 812 5.584649 TGATAGTAACAGTAACAATGGCAGC 59.415 40.000 0.00 0.00 0.00 5.25
710 813 6.237835 CGTGATAGTAACAGTAACAATGGCAG 60.238 42.308 0.00 0.00 0.00 4.85
711 814 5.579119 CGTGATAGTAACAGTAACAATGGCA 59.421 40.000 0.00 0.00 0.00 4.92
712 815 5.006358 CCGTGATAGTAACAGTAACAATGGC 59.994 44.000 0.00 0.00 0.00 4.40
713 816 6.103997 ACCGTGATAGTAACAGTAACAATGG 58.896 40.000 0.00 0.00 0.00 3.16
714 817 6.809689 TGACCGTGATAGTAACAGTAACAATG 59.190 38.462 0.00 0.00 0.00 2.82
715 818 6.927416 TGACCGTGATAGTAACAGTAACAAT 58.073 36.000 0.00 0.00 0.00 2.71
716 819 6.330004 TGACCGTGATAGTAACAGTAACAA 57.670 37.500 0.00 0.00 0.00 2.83
717 820 5.620654 GCTGACCGTGATAGTAACAGTAACA 60.621 44.000 0.00 0.00 0.00 2.41
718 821 4.797349 GCTGACCGTGATAGTAACAGTAAC 59.203 45.833 0.00 0.00 0.00 2.50
719 822 4.460034 TGCTGACCGTGATAGTAACAGTAA 59.540 41.667 0.00 0.00 0.00 2.24
720 823 4.011698 TGCTGACCGTGATAGTAACAGTA 58.988 43.478 0.00 0.00 0.00 2.74
721 824 2.823747 TGCTGACCGTGATAGTAACAGT 59.176 45.455 0.00 0.00 0.00 3.55
722 825 3.439293 CTGCTGACCGTGATAGTAACAG 58.561 50.000 0.00 0.00 0.00 3.16
723 826 2.416836 GCTGCTGACCGTGATAGTAACA 60.417 50.000 0.00 0.00 0.00 2.41
724 827 2.159226 AGCTGCTGACCGTGATAGTAAC 60.159 50.000 0.00 0.00 0.00 2.50
725 828 2.100197 AGCTGCTGACCGTGATAGTAA 58.900 47.619 0.00 0.00 0.00 2.24
726 829 1.763968 AGCTGCTGACCGTGATAGTA 58.236 50.000 0.00 0.00 0.00 1.82
727 830 1.763968 TAGCTGCTGACCGTGATAGT 58.236 50.000 13.43 0.00 0.00 2.12
728 831 2.736978 CTTAGCTGCTGACCGTGATAG 58.263 52.381 13.43 0.00 0.00 2.08
729 832 1.202417 GCTTAGCTGCTGACCGTGATA 60.202 52.381 13.43 0.00 0.00 2.15
730 833 0.460987 GCTTAGCTGCTGACCGTGAT 60.461 55.000 13.43 0.00 0.00 3.06
731 834 1.079819 GCTTAGCTGCTGACCGTGA 60.080 57.895 13.43 0.00 0.00 4.35
732 835 0.173481 TAGCTTAGCTGCTGACCGTG 59.827 55.000 17.97 0.00 43.87 4.94
733 836 0.173708 GTAGCTTAGCTGCTGACCGT 59.826 55.000 17.97 0.00 43.87 4.83
734 837 0.528684 GGTAGCTTAGCTGCTGACCG 60.529 60.000 20.64 0.00 43.87 4.79
735 838 0.537188 TGGTAGCTTAGCTGCTGACC 59.463 55.000 20.64 17.67 43.87 4.02
736 839 1.205893 AGTGGTAGCTTAGCTGCTGAC 59.794 52.381 20.64 16.69 43.87 3.51
737 840 1.205655 CAGTGGTAGCTTAGCTGCTGA 59.794 52.381 20.64 2.53 43.87 4.26
738 841 1.066573 ACAGTGGTAGCTTAGCTGCTG 60.067 52.381 20.64 20.07 43.87 4.41
772 3595 1.153862 CCAGAGACAGCTGACTCGC 60.154 63.158 31.08 17.60 40.75 5.03
787 3610 1.071471 AAGTTGTCTCCGTGCCCAG 59.929 57.895 0.00 0.00 0.00 4.45
795 3618 0.232303 CGTTCGTGCAAGTTGTCTCC 59.768 55.000 4.48 0.00 0.00 3.71
797 3620 0.928229 GTCGTTCGTGCAAGTTGTCT 59.072 50.000 4.48 0.00 0.00 3.41
802 3625 2.660552 CCGGTCGTTCGTGCAAGT 60.661 61.111 0.00 0.00 0.00 3.16
885 3853 0.594602 GAAAGGGTGGGCGTAAACAC 59.405 55.000 0.00 0.00 36.89 3.32
886 3854 0.475044 AGAAAGGGTGGGCGTAAACA 59.525 50.000 0.00 0.00 0.00 2.83
887 3855 1.162698 GAGAAAGGGTGGGCGTAAAC 58.837 55.000 0.00 0.00 0.00 2.01
896 3864 4.473477 AAAGACGGATAGAGAAAGGGTG 57.527 45.455 0.00 0.00 0.00 4.61
897 3865 5.489249 GAAAAAGACGGATAGAGAAAGGGT 58.511 41.667 0.00 0.00 0.00 4.34
902 3884 5.480772 AGAGTGGAAAAAGACGGATAGAGAA 59.519 40.000 0.00 0.00 0.00 2.87
906 3888 4.870991 GGAAGAGTGGAAAAAGACGGATAG 59.129 45.833 0.00 0.00 0.00 2.08
967 3960 1.623686 AGGAGGTGGGGATTGGCAT 60.624 57.895 0.00 0.00 0.00 4.40
1006 4009 4.039245 ACGTGGAAAGAAGAGATGTCTTGA 59.961 41.667 10.29 0.00 43.50 3.02
1072 5575 3.735029 GCGACGACGACTCCACCT 61.735 66.667 12.29 0.00 42.66 4.00
1115 5627 0.830444 ACACGGTGGTCCTCAGCTTA 60.830 55.000 13.48 0.00 41.41 3.09
1179 5691 4.069232 GCCCCCGCTTTTTGGCTC 62.069 66.667 0.00 0.00 40.77 4.70
1180 5692 4.932105 TGCCCCCGCTTTTTGGCT 62.932 61.111 0.00 0.00 44.32 4.75
1241 5756 1.783031 CGTAGCTGAGCGGGTCGTAT 61.783 60.000 0.00 0.00 0.00 3.06
1442 5976 3.381908 ACAGAGGTAATTCGATCTCGCTT 59.618 43.478 0.00 0.00 39.60 4.68
1498 6041 1.219393 GCCAGTCTGCCACTACCTC 59.781 63.158 0.00 0.00 32.21 3.85
1512 6055 4.268797 AGATACATGATGCTACTGCCAG 57.731 45.455 0.00 0.00 38.71 4.85
1514 6057 7.323420 TGTAATAGATACATGATGCTACTGCC 58.677 38.462 0.00 0.00 39.60 4.85
1539 6082 8.523915 TGATTGCTTGATTTCCTACATGTAAT 57.476 30.769 7.06 0.00 32.67 1.89
1540 6083 7.936496 TGATTGCTTGATTTCCTACATGTAA 57.064 32.000 7.06 0.00 0.00 2.41
1549 6092 9.977762 GACATTAAAATTGATTGCTTGATTTCC 57.022 29.630 0.00 0.00 0.00 3.13
1553 6096 7.622713 TGGGACATTAAAATTGATTGCTTGAT 58.377 30.769 0.00 0.00 0.00 2.57
1554 6097 7.002250 TGGGACATTAAAATTGATTGCTTGA 57.998 32.000 0.00 0.00 0.00 3.02
1575 6118 0.749091 TTGCATTGAGAGCCGATGGG 60.749 55.000 0.00 0.00 37.18 4.00
1583 6126 1.807886 GGCTGCCTTGCATTGAGAG 59.192 57.895 12.43 0.00 38.13 3.20
1612 6189 1.148157 GACCGCAGATGATCACACGG 61.148 60.000 19.99 19.99 45.86 4.94
1613 6190 1.474648 CGACCGCAGATGATCACACG 61.475 60.000 0.00 0.00 0.00 4.49
1614 6191 1.148157 CCGACCGCAGATGATCACAC 61.148 60.000 0.00 0.00 0.00 3.82
1615 6192 1.141665 CCGACCGCAGATGATCACA 59.858 57.895 0.00 0.00 0.00 3.58
1616 6193 1.592669 CCCGACCGCAGATGATCAC 60.593 63.158 0.00 0.00 0.00 3.06
1617 6194 1.326951 TTCCCGACCGCAGATGATCA 61.327 55.000 0.00 0.00 0.00 2.92
1618 6195 0.034059 ATTCCCGACCGCAGATGATC 59.966 55.000 0.00 0.00 0.00 2.92
1619 6196 0.034059 GATTCCCGACCGCAGATGAT 59.966 55.000 0.00 0.00 0.00 2.45
1620 6197 1.326951 TGATTCCCGACCGCAGATGA 61.327 55.000 0.00 0.00 0.00 2.92
1621 6198 0.250038 ATGATTCCCGACCGCAGATG 60.250 55.000 0.00 0.00 0.00 2.90
1622 6199 0.034059 GATGATTCCCGACCGCAGAT 59.966 55.000 0.00 0.00 0.00 2.90
1623 6200 1.043116 AGATGATTCCCGACCGCAGA 61.043 55.000 0.00 0.00 0.00 4.26
1624 6201 0.877649 CAGATGATTCCCGACCGCAG 60.878 60.000 0.00 0.00 0.00 5.18
1625 6202 1.143838 CAGATGATTCCCGACCGCA 59.856 57.895 0.00 0.00 0.00 5.69
1626 6203 2.247437 GCAGATGATTCCCGACCGC 61.247 63.158 0.00 0.00 0.00 5.68
1638 6225 1.141665 TGGATGTCGACCGCAGATG 59.858 57.895 14.12 0.00 0.00 2.90
1639 6226 1.141881 GTGGATGTCGACCGCAGAT 59.858 57.895 14.12 0.00 37.78 2.90
1640 6227 2.571757 GTGGATGTCGACCGCAGA 59.428 61.111 14.12 0.00 37.78 4.26
1641 6228 2.509336 GGTGGATGTCGACCGCAG 60.509 66.667 14.12 0.00 39.38 5.18
1647 6234 0.172578 GATCACACGGTGGATGTCGA 59.827 55.000 13.48 0.00 33.87 4.20
1648 6235 0.108851 TGATCACACGGTGGATGTCG 60.109 55.000 13.48 0.00 33.87 4.35
1649 6236 1.732259 GTTGATCACACGGTGGATGTC 59.268 52.381 13.48 5.73 33.87 3.06
1650 6237 1.347707 AGTTGATCACACGGTGGATGT 59.652 47.619 13.48 0.00 33.87 3.06
1651 6238 1.733912 CAGTTGATCACACGGTGGATG 59.266 52.381 13.48 2.67 33.87 3.51
1652 6239 1.347707 ACAGTTGATCACACGGTGGAT 59.652 47.619 13.48 11.78 33.87 3.41
1653 6240 0.756294 ACAGTTGATCACACGGTGGA 59.244 50.000 13.48 7.38 33.87 4.02
1654 6241 0.867746 CACAGTTGATCACACGGTGG 59.132 55.000 21.65 1.73 33.87 4.61
1655 6242 1.864565 TCACAGTTGATCACACGGTG 58.135 50.000 22.55 22.55 34.45 4.94
1656 6243 2.210116 GTTCACAGTTGATCACACGGT 58.790 47.619 0.00 1.56 0.00 4.83
1657 6244 1.531149 GGTTCACAGTTGATCACACGG 59.469 52.381 0.00 0.92 0.00 4.94
1658 6245 2.209273 TGGTTCACAGTTGATCACACG 58.791 47.619 0.00 0.00 0.00 4.49
1659 6246 3.627577 ACTTGGTTCACAGTTGATCACAC 59.372 43.478 0.00 0.00 0.00 3.82
1660 6247 3.884895 ACTTGGTTCACAGTTGATCACA 58.115 40.909 0.00 0.00 0.00 3.58
1661 6248 4.900635 AACTTGGTTCACAGTTGATCAC 57.099 40.909 0.00 0.00 0.00 3.06
1666 6253 5.560966 AGTGTAAACTTGGTTCACAGTTG 57.439 39.130 0.00 0.00 0.00 3.16
1677 6264 3.181480 CCACCAACCCAAGTGTAAACTTG 60.181 47.826 17.60 17.60 44.80 3.16
1686 6273 2.321357 ACCCACCACCAACCCAAGT 61.321 57.895 0.00 0.00 0.00 3.16
1687 6274 1.832167 CACCCACCACCAACCCAAG 60.832 63.158 0.00 0.00 0.00 3.61
1688 6275 2.280416 CACCCACCACCAACCCAA 59.720 61.111 0.00 0.00 0.00 4.12
1691 6278 0.898326 GATTCCACCCACCACCAACC 60.898 60.000 0.00 0.00 0.00 3.77
1693 6280 0.783206 ATGATTCCACCCACCACCAA 59.217 50.000 0.00 0.00 0.00 3.67
1696 6283 2.421529 GGTAGATGATTCCACCCACCAC 60.422 54.545 0.00 0.00 0.00 4.16
1699 6286 1.485066 ACGGTAGATGATTCCACCCAC 59.515 52.381 0.00 0.00 0.00 4.61
1700 6287 1.760613 GACGGTAGATGATTCCACCCA 59.239 52.381 0.00 0.00 0.00 4.51
1701 6288 1.269621 CGACGGTAGATGATTCCACCC 60.270 57.143 0.00 0.00 0.00 4.61
1702 6289 1.679680 TCGACGGTAGATGATTCCACC 59.320 52.381 0.00 0.00 0.00 4.61
1715 6314 2.360852 ACGGAGGATGTCGACGGT 60.361 61.111 11.62 1.47 0.00 4.83
1722 6321 2.607750 AGCCCACACGGAGGATGT 60.608 61.111 0.00 0.00 0.00 3.06
1757 6363 3.307242 CACTCGCTAATCCTTTGCAGTAC 59.693 47.826 0.00 0.00 0.00 2.73
1758 6364 3.521560 CACTCGCTAATCCTTTGCAGTA 58.478 45.455 0.00 0.00 0.00 2.74
1759 6365 2.350522 CACTCGCTAATCCTTTGCAGT 58.649 47.619 0.00 0.00 0.00 4.40
1760 6366 1.667724 CCACTCGCTAATCCTTTGCAG 59.332 52.381 0.00 0.00 0.00 4.41
1761 6367 1.737838 CCACTCGCTAATCCTTTGCA 58.262 50.000 0.00 0.00 0.00 4.08
1762 6368 0.378610 GCCACTCGCTAATCCTTTGC 59.621 55.000 0.00 0.00 0.00 3.68
1763 6369 0.652592 CGCCACTCGCTAATCCTTTG 59.347 55.000 0.00 0.00 34.21 2.77
1764 6370 0.249398 ACGCCACTCGCTAATCCTTT 59.751 50.000 0.00 0.00 43.23 3.11
1765 6371 0.249398 AACGCCACTCGCTAATCCTT 59.751 50.000 0.00 0.00 43.23 3.36
1766 6372 0.179108 GAACGCCACTCGCTAATCCT 60.179 55.000 0.00 0.00 43.23 3.24
1767 6373 1.480219 CGAACGCCACTCGCTAATCC 61.480 60.000 0.00 0.00 43.23 3.01
1768 6374 1.480219 CCGAACGCCACTCGCTAATC 61.480 60.000 0.00 0.00 43.23 1.75
1769 6375 1.518572 CCGAACGCCACTCGCTAAT 60.519 57.895 0.00 0.00 43.23 1.73
1770 6376 2.126228 CCGAACGCCACTCGCTAA 60.126 61.111 0.00 0.00 43.23 3.09
1771 6377 3.367743 ACCGAACGCCACTCGCTA 61.368 61.111 0.00 0.00 43.23 4.26
1781 6387 4.992511 TTTCCCCGCCACCGAACG 62.993 66.667 0.00 0.00 36.29 3.95
1782 6388 3.359523 GTTTCCCCGCCACCGAAC 61.360 66.667 0.00 0.00 36.29 3.95
1783 6389 3.540367 GAGTTTCCCCGCCACCGAA 62.540 63.158 0.00 0.00 36.29 4.30
1784 6390 4.011517 GAGTTTCCCCGCCACCGA 62.012 66.667 0.00 0.00 36.29 4.69
1785 6391 4.016706 AGAGTTTCCCCGCCACCG 62.017 66.667 0.00 0.00 0.00 4.94
1786 6392 2.359975 CAGAGTTTCCCCGCCACC 60.360 66.667 0.00 0.00 0.00 4.61
1787 6393 1.671379 GTCAGAGTTTCCCCGCCAC 60.671 63.158 0.00 0.00 0.00 5.01
1788 6394 2.747686 GTCAGAGTTTCCCCGCCA 59.252 61.111 0.00 0.00 0.00 5.69
1789 6395 2.046217 GGTCAGAGTTTCCCCGCC 60.046 66.667 0.00 0.00 0.00 6.13
1790 6396 2.046217 GGGTCAGAGTTTCCCCGC 60.046 66.667 0.00 0.00 35.52 6.13
1793 6399 2.669240 CGGGGGTCAGAGTTTCCC 59.331 66.667 0.00 0.00 40.41 3.97
1794 6400 2.669240 CCGGGGGTCAGAGTTTCC 59.331 66.667 0.00 0.00 0.00 3.13
1795 6401 2.669240 CCCGGGGGTCAGAGTTTC 59.331 66.667 14.71 0.00 0.00 2.78
1865 6471 2.209838 ATATGACGAACCGTGAGCTG 57.790 50.000 0.00 0.00 41.37 4.24
1866 6472 3.351020 GTATATGACGAACCGTGAGCT 57.649 47.619 0.00 0.00 41.37 4.09
1885 6491 3.367087 CCACCGTAAAGAGATGAAGTCGT 60.367 47.826 0.00 0.00 0.00 4.34
1921 6527 4.160439 CACTACAAGAGCAATCAGGGACTA 59.840 45.833 0.00 0.00 36.02 2.59
1924 6530 2.906389 ACACTACAAGAGCAATCAGGGA 59.094 45.455 0.00 0.00 0.00 4.20
1928 6535 3.820467 CCCAAACACTACAAGAGCAATCA 59.180 43.478 0.00 0.00 0.00 2.57
1947 6554 2.208640 TGTCCAGCCCTAACCCCA 59.791 61.111 0.00 0.00 0.00 4.96
1968 6575 2.992114 AACTCGGCTCGGCTCAGT 60.992 61.111 0.00 0.00 0.00 3.41
1970 6577 2.989253 TGAACTCGGCTCGGCTCA 60.989 61.111 0.00 0.00 0.00 4.26
1999 6606 2.749621 CTCATTTTAGGCGAGCCAAAGT 59.250 45.455 17.18 8.63 38.92 2.66
2056 6663 2.716217 ACAAGCTGAGCCTCCATAAAC 58.284 47.619 0.00 0.00 0.00 2.01
2057 6664 3.439857 AACAAGCTGAGCCTCCATAAA 57.560 42.857 0.00 0.00 0.00 1.40
2060 6667 1.891150 CAAAACAAGCTGAGCCTCCAT 59.109 47.619 0.00 0.00 0.00 3.41
2070 6677 3.763671 CCGGAGGCAAAACAAGCT 58.236 55.556 0.00 0.00 46.14 3.74
2168 6775 1.877165 GCTGCTACTTACGGACGCC 60.877 63.158 0.00 0.00 0.00 5.68
2223 8160 3.991051 ACGCACTCACCCTCACGG 61.991 66.667 0.00 0.00 37.81 4.94
2230 8167 2.029666 AGACTGCACGCACTCACC 59.970 61.111 2.26 0.00 0.00 4.02
2262 8202 2.038269 CCAACTACATGCCGGCGTT 61.038 57.895 21.21 14.97 0.00 4.84
2286 8651 1.649664 CCTCTTCTGGCAATGACTCG 58.350 55.000 0.00 0.00 0.00 4.18
2315 8719 1.379977 CTACCTGGCTCACTCCCGA 60.380 63.158 0.00 0.00 0.00 5.14
2345 8749 2.031516 CGCTCACTTGGAGGCACAG 61.032 63.158 0.00 0.00 44.22 3.66
2545 9208 3.599285 TAGGGTTTCTGCCGTGGCG 62.599 63.158 6.37 1.46 45.51 5.69
2546 9209 1.745489 CTAGGGTTTCTGCCGTGGC 60.745 63.158 3.30 3.30 42.35 5.01
2547 9210 1.745489 GCTAGGGTTTCTGCCGTGG 60.745 63.158 0.00 0.00 0.00 4.94
2548 9211 2.100631 CGCTAGGGTTTCTGCCGTG 61.101 63.158 0.00 0.00 0.00 4.94
2549 9212 2.264794 CGCTAGGGTTTCTGCCGT 59.735 61.111 0.00 0.00 0.00 5.68
2550 9213 2.511600 CCGCTAGGGTTTCTGCCG 60.512 66.667 6.02 0.00 0.00 5.69
2551 9214 2.824489 GCCGCTAGGGTTTCTGCC 60.824 66.667 6.02 0.00 38.44 4.85
2552 9215 1.452108 ATGCCGCTAGGGTTTCTGC 60.452 57.895 6.02 2.24 38.44 4.26
2553 9216 1.097547 CCATGCCGCTAGGGTTTCTG 61.098 60.000 6.02 0.00 38.44 3.02
2554 9217 1.224592 CCATGCCGCTAGGGTTTCT 59.775 57.895 6.02 0.00 38.44 2.52
2555 9218 1.823899 CCCATGCCGCTAGGGTTTC 60.824 63.158 11.35 0.00 37.81 2.78
2556 9219 2.275418 CCCATGCCGCTAGGGTTT 59.725 61.111 11.35 0.00 37.81 3.27
2557 9220 2.690881 TCCCATGCCGCTAGGGTT 60.691 61.111 17.02 0.00 43.31 4.11
2558 9221 3.480133 GTCCCATGCCGCTAGGGT 61.480 66.667 17.02 0.00 43.31 4.34
2559 9222 4.256180 GGTCCCATGCCGCTAGGG 62.256 72.222 12.91 12.91 44.22 3.53
2560 9223 4.609018 CGGTCCCATGCCGCTAGG 62.609 72.222 0.00 0.00 42.82 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.