Multiple sequence alignment - TraesCS7B01G425700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G425700 chr7B 100.000 2795 0 0 1 2795 694527531 694524737 0.000000e+00 5162.0
1 TraesCS7B01G425700 chr7B 90.882 1009 84 7 1026 2032 747107425 747108427 0.000000e+00 1347.0
2 TraesCS7B01G425700 chr7B 87.026 501 49 10 2303 2795 630891390 630890898 4.070000e-153 551.0
3 TraesCS7B01G425700 chr7B 87.972 424 39 8 1622 2035 682661266 682661687 9.000000e-135 490.0
4 TraesCS7B01G425700 chr7B 86.824 425 42 2 1606 2030 641950857 641951267 1.960000e-126 462.0
5 TraesCS7B01G425700 chr7B 92.251 271 17 2 2035 2302 641951308 641951577 5.650000e-102 381.0
6 TraesCS7B01G425700 chr7B 94.286 105 3 2 2303 2407 700888792 700888893 1.040000e-34 158.0
7 TraesCS7B01G425700 chr5A 94.335 1518 79 6 520 2035 288889998 288891510 0.000000e+00 2320.0
8 TraesCS7B01G425700 chr5D 89.754 1669 119 23 668 2302 399707064 399705414 0.000000e+00 2087.0
9 TraesCS7B01G425700 chr5D 90.999 1011 84 6 1026 2035 13172421 13171417 0.000000e+00 1356.0
10 TraesCS7B01G425700 chr2A 91.733 1391 101 5 646 2035 188605530 188606907 0.000000e+00 1919.0
11 TraesCS7B01G425700 chr1A 91.236 1392 114 6 646 2035 145814925 145813540 0.000000e+00 1888.0
12 TraesCS7B01G425700 chr3A 89.727 1392 118 11 646 2035 493559490 493560858 0.000000e+00 1755.0
13 TraesCS7B01G425700 chr4D 93.459 1009 60 5 1026 2033 46138594 46137591 0.000000e+00 1493.0
14 TraesCS7B01G425700 chr4D 89.474 437 37 5 2366 2795 489878571 489879005 6.810000e-151 544.0
15 TraesCS7B01G425700 chr2D 93.168 1010 61 6 1026 2033 582871609 582872612 0.000000e+00 1476.0
16 TraesCS7B01G425700 chr2D 87.859 453 41 10 2356 2795 37873227 37872776 1.150000e-143 520.0
17 TraesCS7B01G425700 chr2D 87.946 448 41 8 2356 2795 557440927 557440485 1.480000e-142 516.0
18 TraesCS7B01G425700 chr6B 90.974 986 83 5 1042 2026 148307042 148306062 0.000000e+00 1323.0
19 TraesCS7B01G425700 chr6B 95.603 614 26 1 580 1192 270898174 270898787 0.000000e+00 983.0
20 TraesCS7B01G425700 chr6B 94.074 270 12 2 2036 2302 285562537 285562805 9.320000e-110 407.0
21 TraesCS7B01G425700 chr6B 90.253 277 22 3 2036 2308 268044715 268044440 9.520000e-95 357.0
22 TraesCS7B01G425700 chr2B 89.614 1011 71 10 1026 2035 50247545 50248522 0.000000e+00 1254.0
23 TraesCS7B01G425700 chr2B 87.184 515 42 11 2303 2795 787512108 787511596 5.230000e-157 564.0
24 TraesCS7B01G425700 chr2B 90.775 271 21 3 2035 2302 792560816 792560547 2.650000e-95 359.0
25 TraesCS7B01G425700 chr4B 88.600 500 47 6 2303 2795 85744245 85743749 1.430000e-167 599.0
26 TraesCS7B01G425700 chr1B 87.649 502 50 9 2303 2795 40634779 40634281 8.680000e-160 573.0
27 TraesCS7B01G425700 chr1B 90.374 374 32 1 64 437 186541418 186541049 3.240000e-134 488.0
28 TraesCS7B01G425700 chr1B 92.647 272 16 2 2035 2302 64751829 64752100 3.380000e-104 388.0
29 TraesCS7B01G425700 chr5B 87.649 502 47 10 2303 2795 30870756 30870261 1.120000e-158 569.0
30 TraesCS7B01G425700 chr3B 87.251 502 47 12 2303 2795 803677517 803677024 8.750000e-155 556.0
31 TraesCS7B01G425700 chr4A 89.202 426 44 1 1608 2033 294672348 294671925 5.300000e-147 531.0
32 TraesCS7B01G425700 chr4A 85.487 503 56 12 2303 2795 663762789 663763284 2.480000e-140 508.0
33 TraesCS7B01G425700 chr7A 92.350 366 24 4 665 1029 56660484 56660846 4.130000e-143 518.0
34 TraesCS7B01G425700 chr7A 91.530 366 30 1 665 1029 56714048 56714413 1.160000e-138 503.0
35 TraesCS7B01G425700 chr7A 90.698 258 20 1 78 335 619359346 619359599 9.590000e-90 340.0
36 TraesCS7B01G425700 chrUn 90.263 380 36 1 648 1026 381946864 381947243 1.930000e-136 496.0
37 TraesCS7B01G425700 chrUn 91.743 109 9 0 498 606 105289829 105289721 4.820000e-33 152.0
38 TraesCS7B01G425700 chrUn 82.979 94 9 4 506 598 26508406 26508319 8.300000e-11 78.7
39 TraesCS7B01G425700 chrUn 100.000 29 0 0 561 589 26521732 26521704 1.000000e-03 54.7
40 TraesCS7B01G425700 chrUn 100.000 28 0 0 565 592 26772557 26772584 5.000000e-03 52.8
41 TraesCS7B01G425700 chr6A 88.515 357 36 2 61 416 608321926 608322278 7.150000e-116 427.0
42 TraesCS7B01G425700 chr6A 95.000 60 3 0 1 60 608321822 608321881 8.240000e-16 95.3
43 TraesCS7B01G425700 chr6A 94.000 50 3 0 554 603 42180084 42180133 2.990000e-10 76.8
44 TraesCS7B01G425700 chr6A 81.111 90 11 3 510 598 47703591 47703675 1.800000e-07 67.6
45 TraesCS7B01G425700 chr7D 94.074 270 12 2 2036 2302 504421643 504421375 9.320000e-110 407.0
46 TraesCS7B01G425700 chr3D 93.633 267 13 2 2039 2302 453234588 453234323 2.020000e-106 396.0
47 TraesCS7B01G425700 chr3D 91.912 272 17 2 2036 2304 210012976 210013245 2.630000e-100 375.0
48 TraesCS7B01G425700 chr1D 96.581 117 3 1 489 605 120316207 120316322 2.840000e-45 193.0
49 TraesCS7B01G425700 chr1D 90.805 87 8 0 165 251 46223084 46222998 1.760000e-22 117.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G425700 chr7B 694524737 694527531 2794 True 5162.0 5162 100.0000 1 2795 1 chr7B.!!$R2 2794
1 TraesCS7B01G425700 chr7B 747107425 747108427 1002 False 1347.0 1347 90.8820 1026 2032 1 chr7B.!!$F3 1006
2 TraesCS7B01G425700 chr7B 641950857 641951577 720 False 421.5 462 89.5375 1606 2302 2 chr7B.!!$F4 696
3 TraesCS7B01G425700 chr5A 288889998 288891510 1512 False 2320.0 2320 94.3350 520 2035 1 chr5A.!!$F1 1515
4 TraesCS7B01G425700 chr5D 399705414 399707064 1650 True 2087.0 2087 89.7540 668 2302 1 chr5D.!!$R2 1634
5 TraesCS7B01G425700 chr5D 13171417 13172421 1004 True 1356.0 1356 90.9990 1026 2035 1 chr5D.!!$R1 1009
6 TraesCS7B01G425700 chr2A 188605530 188606907 1377 False 1919.0 1919 91.7330 646 2035 1 chr2A.!!$F1 1389
7 TraesCS7B01G425700 chr1A 145813540 145814925 1385 True 1888.0 1888 91.2360 646 2035 1 chr1A.!!$R1 1389
8 TraesCS7B01G425700 chr3A 493559490 493560858 1368 False 1755.0 1755 89.7270 646 2035 1 chr3A.!!$F1 1389
9 TraesCS7B01G425700 chr4D 46137591 46138594 1003 True 1493.0 1493 93.4590 1026 2033 1 chr4D.!!$R1 1007
10 TraesCS7B01G425700 chr2D 582871609 582872612 1003 False 1476.0 1476 93.1680 1026 2033 1 chr2D.!!$F1 1007
11 TraesCS7B01G425700 chr6B 148306062 148307042 980 True 1323.0 1323 90.9740 1042 2026 1 chr6B.!!$R1 984
12 TraesCS7B01G425700 chr6B 270898174 270898787 613 False 983.0 983 95.6030 580 1192 1 chr6B.!!$F1 612
13 TraesCS7B01G425700 chr2B 50247545 50248522 977 False 1254.0 1254 89.6140 1026 2035 1 chr2B.!!$F1 1009
14 TraesCS7B01G425700 chr2B 787511596 787512108 512 True 564.0 564 87.1840 2303 2795 1 chr2B.!!$R1 492

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
283 284 0.027455 TTTCTGTTTGACAGCGTGCG 59.973 50.0 3.26 0.0 45.54 5.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2036 2050 0.041312 CGAGCAGTTTTTGTCCCACG 60.041 55.0 0.0 0.0 0.0 4.94 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 1.886886 TCCTTCACGCCCAAAGTAAC 58.113 50.000 0.00 0.00 0.00 2.50
20 21 1.141254 TCCTTCACGCCCAAAGTAACA 59.859 47.619 0.00 0.00 0.00 2.41
21 22 1.950909 CCTTCACGCCCAAAGTAACAA 59.049 47.619 0.00 0.00 0.00 2.83
22 23 2.031157 CCTTCACGCCCAAAGTAACAAG 60.031 50.000 0.00 0.00 0.00 3.16
23 24 2.623878 TCACGCCCAAAGTAACAAGA 57.376 45.000 0.00 0.00 0.00 3.02
24 25 2.920524 TCACGCCCAAAGTAACAAGAA 58.079 42.857 0.00 0.00 0.00 2.52
25 26 3.482436 TCACGCCCAAAGTAACAAGAAT 58.518 40.909 0.00 0.00 0.00 2.40
26 27 4.643463 TCACGCCCAAAGTAACAAGAATA 58.357 39.130 0.00 0.00 0.00 1.75
27 28 5.064558 TCACGCCCAAAGTAACAAGAATAA 58.935 37.500 0.00 0.00 0.00 1.40
28 29 5.049267 TCACGCCCAAAGTAACAAGAATAAC 60.049 40.000 0.00 0.00 0.00 1.89
29 30 4.822896 ACGCCCAAAGTAACAAGAATAACA 59.177 37.500 0.00 0.00 0.00 2.41
30 31 5.299782 ACGCCCAAAGTAACAAGAATAACAA 59.700 36.000 0.00 0.00 0.00 2.83
31 32 6.015772 ACGCCCAAAGTAACAAGAATAACAAT 60.016 34.615 0.00 0.00 0.00 2.71
32 33 6.866248 CGCCCAAAGTAACAAGAATAACAATT 59.134 34.615 0.00 0.00 0.00 2.32
33 34 7.148820 CGCCCAAAGTAACAAGAATAACAATTG 60.149 37.037 3.24 3.24 0.00 2.32
34 35 7.870445 GCCCAAAGTAACAAGAATAACAATTGA 59.130 33.333 13.59 0.00 0.00 2.57
35 36 9.927668 CCCAAAGTAACAAGAATAACAATTGAT 57.072 29.630 13.59 2.25 0.00 2.57
40 41 9.533831 AGTAACAAGAATAACAATTGATTCCCT 57.466 29.630 13.59 0.72 33.34 4.20
43 44 8.525290 ACAAGAATAACAATTGATTCCCTAGG 57.475 34.615 13.59 0.06 33.34 3.02
44 45 7.561356 ACAAGAATAACAATTGATTCCCTAGGG 59.439 37.037 23.22 23.22 33.34 3.53
45 46 7.465900 AGAATAACAATTGATTCCCTAGGGA 57.534 36.000 27.73 27.73 43.52 4.20
46 47 7.290813 AGAATAACAATTGATTCCCTAGGGAC 58.709 38.462 31.18 20.12 45.11 4.46
47 48 6.848562 ATAACAATTGATTCCCTAGGGACT 57.151 37.500 31.18 25.57 45.11 3.85
48 49 4.779993 ACAATTGATTCCCTAGGGACTC 57.220 45.455 31.99 31.99 45.11 3.36
49 50 3.134804 ACAATTGATTCCCTAGGGACTCG 59.865 47.826 32.15 23.54 44.06 4.18
50 51 2.544844 TTGATTCCCTAGGGACTCGT 57.455 50.000 32.15 19.64 44.06 4.18
51 52 3.675348 TTGATTCCCTAGGGACTCGTA 57.325 47.619 32.15 23.61 44.06 3.43
52 53 3.225177 TGATTCCCTAGGGACTCGTAG 57.775 52.381 32.15 7.28 44.06 3.51
53 54 2.512896 TGATTCCCTAGGGACTCGTAGT 59.487 50.000 32.15 14.57 44.06 2.73
54 55 2.725221 TTCCCTAGGGACTCGTAGTC 57.275 55.000 31.18 6.50 45.11 2.59
55 56 0.467384 TCCCTAGGGACTCGTAGTCG 59.533 60.000 27.73 0.00 45.96 4.18
56 57 0.467384 CCCTAGGGACTCGTAGTCGA 59.533 60.000 24.99 0.00 45.96 4.20
57 58 1.580815 CCTAGGGACTCGTAGTCGAC 58.419 60.000 7.70 7.70 45.96 4.20
70 71 3.879427 GTAGTCGACGGAGATGATTCTG 58.121 50.000 10.46 0.00 30.30 3.02
71 72 1.066303 AGTCGACGGAGATGATTCTGC 59.934 52.381 10.46 0.00 36.99 4.26
72 73 0.385751 TCGACGGAGATGATTCTGCC 59.614 55.000 0.00 0.00 37.03 4.85
73 74 0.936764 CGACGGAGATGATTCTGCCG 60.937 60.000 0.00 0.00 42.93 5.69
74 75 0.598680 GACGGAGATGATTCTGCCGG 60.599 60.000 0.00 0.00 42.24 6.13
75 76 1.043116 ACGGAGATGATTCTGCCGGA 61.043 55.000 5.05 0.00 42.24 5.14
76 77 0.104855 CGGAGATGATTCTGCCGGAA 59.895 55.000 5.05 0.00 37.03 4.30
77 78 1.473257 CGGAGATGATTCTGCCGGAAA 60.473 52.381 5.05 0.00 37.03 3.13
78 79 2.808202 CGGAGATGATTCTGCCGGAAAT 60.808 50.000 5.05 0.27 37.03 2.17
79 80 2.810852 GGAGATGATTCTGCCGGAAATC 59.189 50.000 5.05 11.55 37.49 2.17
80 81 2.478134 GAGATGATTCTGCCGGAAATCG 59.522 50.000 5.05 0.00 37.49 3.34
81 82 4.653981 GAGATGATTCTGCCGGAAATCGG 61.654 52.174 5.05 0.00 46.75 4.18
89 90 2.483288 CGGAAATCGGCGGTTTGG 59.517 61.111 24.45 10.79 34.75 3.28
90 91 2.036006 CGGAAATCGGCGGTTTGGA 61.036 57.895 24.45 0.00 34.75 3.53
91 92 1.373590 CGGAAATCGGCGGTTTGGAT 61.374 55.000 24.45 0.00 34.75 3.41
92 93 1.670791 GGAAATCGGCGGTTTGGATA 58.329 50.000 24.45 0.00 0.00 2.59
93 94 1.332686 GGAAATCGGCGGTTTGGATAC 59.667 52.381 24.45 7.81 0.00 2.24
94 95 1.004292 GAAATCGGCGGTTTGGATACG 60.004 52.381 24.45 0.00 42.51 3.06
95 96 0.812412 AATCGGCGGTTTGGATACGG 60.812 55.000 7.21 0.00 42.51 4.02
96 97 2.653953 ATCGGCGGTTTGGATACGGG 62.654 60.000 7.21 0.00 42.51 5.28
97 98 2.585698 GGCGGTTTGGATACGGGA 59.414 61.111 0.00 0.00 42.51 5.14
98 99 1.816679 GGCGGTTTGGATACGGGAC 60.817 63.158 0.00 0.00 42.51 4.46
99 100 1.219935 GCGGTTTGGATACGGGACT 59.780 57.895 0.00 0.00 42.51 3.85
100 101 0.808847 GCGGTTTGGATACGGGACTC 60.809 60.000 0.00 0.00 42.51 3.36
101 102 0.179092 CGGTTTGGATACGGGACTCC 60.179 60.000 0.00 0.00 42.51 3.85
120 121 1.501741 GGTGACGGCGAGTTACGTA 59.498 57.895 16.62 0.00 44.24 3.57
121 122 0.794605 GGTGACGGCGAGTTACGTAC 60.795 60.000 16.62 0.09 44.24 3.67
122 123 0.166814 GTGACGGCGAGTTACGTACT 59.833 55.000 16.62 0.00 44.24 2.73
123 124 1.393539 GTGACGGCGAGTTACGTACTA 59.606 52.381 16.62 0.00 44.24 1.82
124 125 2.073056 TGACGGCGAGTTACGTACTAA 58.927 47.619 16.62 0.00 44.24 2.24
125 126 2.482336 TGACGGCGAGTTACGTACTAAA 59.518 45.455 16.62 0.00 44.24 1.85
126 127 3.058570 TGACGGCGAGTTACGTACTAAAA 60.059 43.478 16.62 0.00 44.24 1.52
127 128 3.234386 ACGGCGAGTTACGTACTAAAAC 58.766 45.455 16.62 0.00 42.15 2.43
128 129 3.233578 CGGCGAGTTACGTACTAAAACA 58.766 45.455 0.00 0.00 44.60 2.83
129 130 3.668191 CGGCGAGTTACGTACTAAAACAA 59.332 43.478 0.00 0.00 44.60 2.83
130 131 4.148000 CGGCGAGTTACGTACTAAAACAAA 59.852 41.667 0.00 0.00 44.60 2.83
131 132 5.602516 GGCGAGTTACGTACTAAAACAAAG 58.397 41.667 0.00 0.00 44.60 2.77
132 133 5.388786 GGCGAGTTACGTACTAAAACAAAGG 60.389 44.000 0.00 0.00 44.60 3.11
133 134 5.175673 GCGAGTTACGTACTAAAACAAAGGT 59.824 40.000 0.00 0.00 44.60 3.50
134 135 6.575132 CGAGTTACGTACTAAAACAAAGGTG 58.425 40.000 0.00 0.00 37.17 4.00
135 136 6.346040 CGAGTTACGTACTAAAACAAAGGTGG 60.346 42.308 0.00 0.00 37.17 4.61
136 137 5.759763 AGTTACGTACTAAAACAAAGGTGGG 59.240 40.000 0.00 0.00 34.56 4.61
137 138 3.479489 ACGTACTAAAACAAAGGTGGGG 58.521 45.455 0.00 0.00 0.00 4.96
138 139 2.227149 CGTACTAAAACAAAGGTGGGGC 59.773 50.000 0.00 0.00 0.00 5.80
139 140 1.324383 ACTAAAACAAAGGTGGGGCG 58.676 50.000 0.00 0.00 0.00 6.13
140 141 1.133730 ACTAAAACAAAGGTGGGGCGA 60.134 47.619 0.00 0.00 0.00 5.54
141 142 1.539827 CTAAAACAAAGGTGGGGCGAG 59.460 52.381 0.00 0.00 0.00 5.03
142 143 1.112916 AAAACAAAGGTGGGGCGAGG 61.113 55.000 0.00 0.00 0.00 4.63
143 144 4.660938 ACAAAGGTGGGGCGAGGC 62.661 66.667 0.00 0.00 0.00 4.70
154 155 4.944249 GCGAGGCCAAACAACTTC 57.056 55.556 5.01 0.00 0.00 3.01
155 156 2.029743 GCGAGGCCAAACAACTTCA 58.970 52.632 5.01 0.00 0.00 3.02
156 157 0.317854 GCGAGGCCAAACAACTTCAC 60.318 55.000 5.01 0.00 0.00 3.18
157 158 1.021202 CGAGGCCAAACAACTTCACA 58.979 50.000 5.01 0.00 0.00 3.58
158 159 1.002468 CGAGGCCAAACAACTTCACAG 60.002 52.381 5.01 0.00 0.00 3.66
159 160 2.297701 GAGGCCAAACAACTTCACAGA 58.702 47.619 5.01 0.00 0.00 3.41
160 161 2.024414 AGGCCAAACAACTTCACAGAC 58.976 47.619 5.01 0.00 0.00 3.51
161 162 1.268539 GGCCAAACAACTTCACAGACG 60.269 52.381 0.00 0.00 0.00 4.18
162 163 1.400494 GCCAAACAACTTCACAGACGT 59.600 47.619 0.00 0.00 0.00 4.34
163 164 2.538939 GCCAAACAACTTCACAGACGTC 60.539 50.000 7.70 7.70 0.00 4.34
164 165 2.031683 CCAAACAACTTCACAGACGTCC 59.968 50.000 13.01 0.00 0.00 4.79
165 166 1.567504 AACAACTTCACAGACGTCCG 58.432 50.000 13.01 4.15 0.00 4.79
166 167 0.249322 ACAACTTCACAGACGTCCGG 60.249 55.000 13.01 7.67 0.00 5.14
167 168 1.300697 AACTTCACAGACGTCCGGC 60.301 57.895 13.01 0.00 0.00 6.13
169 170 4.351938 TTCACAGACGTCCGGCGG 62.352 66.667 22.51 22.51 46.52 6.13
185 186 3.573558 GGCTCGAAACCGATTGCA 58.426 55.556 0.00 0.00 35.31 4.08
186 187 1.425428 GGCTCGAAACCGATTGCAG 59.575 57.895 0.00 0.00 35.31 4.41
187 188 1.425428 GCTCGAAACCGATTGCAGG 59.575 57.895 0.00 0.00 35.31 4.85
188 189 1.982073 GCTCGAAACCGATTGCAGGG 61.982 60.000 0.00 0.00 35.31 4.45
189 190 0.673644 CTCGAAACCGATTGCAGGGT 60.674 55.000 0.74 0.74 38.44 4.34
190 191 0.672401 TCGAAACCGATTGCAGGGTC 60.672 55.000 6.63 0.00 34.85 4.46
191 192 1.794222 GAAACCGATTGCAGGGTCG 59.206 57.895 6.63 8.54 34.85 4.79
195 196 2.892640 CGATTGCAGGGTCGGAGA 59.107 61.111 9.52 0.00 34.39 3.71
208 209 2.799371 GGAGACGGGCGACTACAG 59.201 66.667 0.00 0.00 0.00 2.74
209 210 2.102553 GAGACGGGCGACTACAGC 59.897 66.667 0.00 0.00 0.00 4.40
210 211 2.361357 AGACGGGCGACTACAGCT 60.361 61.111 0.00 0.00 34.52 4.24
211 212 2.102553 GACGGGCGACTACAGCTC 59.897 66.667 0.00 0.00 34.52 4.09
214 215 2.882876 GGGCGACTACAGCTCGAA 59.117 61.111 0.00 0.00 32.65 3.71
215 216 1.214589 GGGCGACTACAGCTCGAAA 59.785 57.895 0.00 0.00 32.65 3.46
216 217 1.077089 GGGCGACTACAGCTCGAAAC 61.077 60.000 0.00 0.00 32.65 2.78
217 218 1.077089 GGCGACTACAGCTCGAAACC 61.077 60.000 0.00 0.00 32.65 3.27
218 219 1.403972 GCGACTACAGCTCGAAACCG 61.404 60.000 0.00 0.00 32.65 4.44
219 220 0.109873 CGACTACAGCTCGAAACCGT 60.110 55.000 0.00 0.00 32.65 4.83
220 221 1.337821 GACTACAGCTCGAAACCGTG 58.662 55.000 0.00 0.00 0.00 4.94
221 222 0.672342 ACTACAGCTCGAAACCGTGT 59.328 50.000 0.00 0.00 0.00 4.49
222 223 1.068127 ACTACAGCTCGAAACCGTGTT 59.932 47.619 0.00 0.00 0.00 3.32
223 224 1.719780 CTACAGCTCGAAACCGTGTTC 59.280 52.381 0.00 0.00 0.00 3.18
224 225 0.878961 ACAGCTCGAAACCGTGTTCC 60.879 55.000 0.00 0.00 0.00 3.62
225 226 0.600255 CAGCTCGAAACCGTGTTCCT 60.600 55.000 0.00 0.00 0.00 3.36
226 227 0.600255 AGCTCGAAACCGTGTTCCTG 60.600 55.000 0.00 0.00 0.00 3.86
227 228 0.878961 GCTCGAAACCGTGTTCCTGT 60.879 55.000 0.00 0.00 0.00 4.00
228 229 1.137513 CTCGAAACCGTGTTCCTGTC 58.862 55.000 0.00 0.00 0.00 3.51
229 230 0.249573 TCGAAACCGTGTTCCTGTCC 60.250 55.000 0.00 0.00 0.00 4.02
230 231 0.531090 CGAAACCGTGTTCCTGTCCA 60.531 55.000 0.00 0.00 0.00 4.02
231 232 1.670791 GAAACCGTGTTCCTGTCCAA 58.329 50.000 0.00 0.00 0.00 3.53
232 233 2.018515 GAAACCGTGTTCCTGTCCAAA 58.981 47.619 0.00 0.00 0.00 3.28
233 234 1.385528 AACCGTGTTCCTGTCCAAAC 58.614 50.000 0.00 0.00 0.00 2.93
234 235 0.544697 ACCGTGTTCCTGTCCAAACT 59.455 50.000 0.00 0.00 0.00 2.66
235 236 1.226746 CCGTGTTCCTGTCCAAACTC 58.773 55.000 0.00 0.00 0.00 3.01
236 237 0.859232 CGTGTTCCTGTCCAAACTCG 59.141 55.000 0.00 0.00 36.47 4.18
237 238 0.586802 GTGTTCCTGTCCAAACTCGC 59.413 55.000 0.00 0.00 0.00 5.03
238 239 0.468226 TGTTCCTGTCCAAACTCGCT 59.532 50.000 0.00 0.00 0.00 4.93
239 240 1.134220 TGTTCCTGTCCAAACTCGCTT 60.134 47.619 0.00 0.00 0.00 4.68
240 241 1.531578 GTTCCTGTCCAAACTCGCTTC 59.468 52.381 0.00 0.00 0.00 3.86
241 242 0.034896 TCCTGTCCAAACTCGCTTCC 59.965 55.000 0.00 0.00 0.00 3.46
242 243 1.291877 CCTGTCCAAACTCGCTTCCG 61.292 60.000 0.00 0.00 0.00 4.30
243 244 1.291877 CTGTCCAAACTCGCTTCCGG 61.292 60.000 0.00 0.00 34.56 5.14
244 245 2.033194 GTCCAAACTCGCTTCCGGG 61.033 63.158 0.00 0.00 41.84 5.73
250 251 4.796231 CTCGCTTCCGGGTCGTGG 62.796 72.222 0.00 0.00 34.56 4.94
253 254 4.324991 GCTTCCGGGTCGTGGGTT 62.325 66.667 0.00 0.00 0.00 4.11
254 255 2.358247 CTTCCGGGTCGTGGGTTG 60.358 66.667 0.00 0.00 0.00 3.77
255 256 2.843411 TTCCGGGTCGTGGGTTGA 60.843 61.111 0.00 0.00 0.00 3.18
256 257 3.167822 TTCCGGGTCGTGGGTTGAC 62.168 63.158 0.00 0.00 35.60 3.18
257 258 3.622826 CCGGGTCGTGGGTTGACT 61.623 66.667 0.00 0.00 36.58 3.41
258 259 2.424302 CGGGTCGTGGGTTGACTT 59.576 61.111 0.00 0.00 36.58 3.01
259 260 1.666872 CGGGTCGTGGGTTGACTTC 60.667 63.158 0.00 0.00 36.58 3.01
260 261 1.752833 GGGTCGTGGGTTGACTTCT 59.247 57.895 0.00 0.00 36.58 2.85
261 262 0.602905 GGGTCGTGGGTTGACTTCTG 60.603 60.000 0.00 0.00 36.58 3.02
262 263 0.391597 GGTCGTGGGTTGACTTCTGA 59.608 55.000 0.00 0.00 36.58 3.27
263 264 1.002087 GGTCGTGGGTTGACTTCTGAT 59.998 52.381 0.00 0.00 36.58 2.90
264 265 2.550208 GGTCGTGGGTTGACTTCTGATT 60.550 50.000 0.00 0.00 36.58 2.57
265 266 3.139077 GTCGTGGGTTGACTTCTGATTT 58.861 45.455 0.00 0.00 33.54 2.17
266 267 3.564225 GTCGTGGGTTGACTTCTGATTTT 59.436 43.478 0.00 0.00 33.54 1.82
267 268 3.813166 TCGTGGGTTGACTTCTGATTTTC 59.187 43.478 0.00 0.00 0.00 2.29
268 269 3.815401 CGTGGGTTGACTTCTGATTTTCT 59.185 43.478 0.00 0.00 0.00 2.52
269 270 4.319766 CGTGGGTTGACTTCTGATTTTCTG 60.320 45.833 0.00 0.00 0.00 3.02
270 271 4.580580 GTGGGTTGACTTCTGATTTTCTGT 59.419 41.667 0.00 0.00 0.00 3.41
271 272 5.067805 GTGGGTTGACTTCTGATTTTCTGTT 59.932 40.000 0.00 0.00 0.00 3.16
272 273 5.656416 TGGGTTGACTTCTGATTTTCTGTTT 59.344 36.000 0.00 0.00 0.00 2.83
273 274 5.979517 GGGTTGACTTCTGATTTTCTGTTTG 59.020 40.000 0.00 0.00 0.00 2.93
274 275 6.183360 GGGTTGACTTCTGATTTTCTGTTTGA 60.183 38.462 0.00 0.00 0.00 2.69
275 276 6.693113 GGTTGACTTCTGATTTTCTGTTTGAC 59.307 38.462 0.00 0.00 0.00 3.18
276 277 7.250569 GTTGACTTCTGATTTTCTGTTTGACA 58.749 34.615 0.00 0.00 0.00 3.58
278 279 5.825507 ACTTCTGATTTTCTGTTTGACAGC 58.174 37.500 3.26 0.00 45.54 4.40
279 280 4.472691 TCTGATTTTCTGTTTGACAGCG 57.527 40.909 3.26 0.00 45.54 5.18
280 281 3.876914 TCTGATTTTCTGTTTGACAGCGT 59.123 39.130 3.26 0.00 45.54 5.07
281 282 3.951306 TGATTTTCTGTTTGACAGCGTG 58.049 40.909 3.26 0.00 45.54 5.34
282 283 2.187351 TTTTCTGTTTGACAGCGTGC 57.813 45.000 3.26 0.00 45.54 5.34
283 284 0.027455 TTTCTGTTTGACAGCGTGCG 59.973 50.000 3.26 0.00 45.54 5.34
284 285 1.087202 TTCTGTTTGACAGCGTGCGT 61.087 50.000 3.26 0.00 45.54 5.24
285 286 1.368019 CTGTTTGACAGCGTGCGTG 60.368 57.895 0.00 0.00 39.62 5.34
286 287 2.035617 CTGTTTGACAGCGTGCGTGT 62.036 55.000 0.00 0.00 39.62 4.49
287 288 0.806492 TGTTTGACAGCGTGCGTGTA 60.806 50.000 0.00 0.00 0.00 2.90
288 289 0.382636 GTTTGACAGCGTGCGTGTAC 60.383 55.000 0.00 0.00 0.00 2.90
289 290 0.806492 TTTGACAGCGTGCGTGTACA 60.806 50.000 0.00 0.00 0.00 2.90
290 291 0.598942 TTGACAGCGTGCGTGTACAT 60.599 50.000 0.00 0.00 0.00 2.29
291 292 1.006825 TGACAGCGTGCGTGTACATC 61.007 55.000 0.00 0.00 0.00 3.06
292 293 0.732880 GACAGCGTGCGTGTACATCT 60.733 55.000 0.00 0.00 0.00 2.90
293 294 1.008875 ACAGCGTGCGTGTACATCTG 61.009 55.000 0.00 3.16 32.58 2.90
294 295 0.732538 CAGCGTGCGTGTACATCTGA 60.733 55.000 0.00 0.00 0.00 3.27
295 296 0.173481 AGCGTGCGTGTACATCTGAT 59.827 50.000 0.00 0.00 0.00 2.90
296 297 0.999406 GCGTGCGTGTACATCTGATT 59.001 50.000 0.00 0.00 0.00 2.57
297 298 1.267038 GCGTGCGTGTACATCTGATTG 60.267 52.381 0.00 0.00 0.00 2.67
298 299 1.324435 CGTGCGTGTACATCTGATTGG 59.676 52.381 0.00 0.00 0.00 3.16
299 300 1.062587 GTGCGTGTACATCTGATTGGC 59.937 52.381 0.00 0.00 0.00 4.52
300 301 1.338579 TGCGTGTACATCTGATTGGCA 60.339 47.619 0.00 0.00 0.00 4.92
301 302 1.328680 GCGTGTACATCTGATTGGCAG 59.671 52.381 0.00 0.00 46.31 4.85
302 303 2.621338 CGTGTACATCTGATTGGCAGT 58.379 47.619 0.00 0.00 45.14 4.40
303 304 2.349580 CGTGTACATCTGATTGGCAGTG 59.650 50.000 0.00 0.00 45.14 3.66
304 305 3.338249 GTGTACATCTGATTGGCAGTGT 58.662 45.455 0.00 0.00 45.14 3.55
305 306 3.372206 GTGTACATCTGATTGGCAGTGTC 59.628 47.826 0.00 0.00 45.14 3.67
306 307 1.730501 ACATCTGATTGGCAGTGTCG 58.269 50.000 0.00 0.00 45.14 4.35
307 308 0.376152 CATCTGATTGGCAGTGTCGC 59.624 55.000 0.00 0.00 45.14 5.19
308 309 0.251354 ATCTGATTGGCAGTGTCGCT 59.749 50.000 0.00 0.00 45.14 4.93
309 310 0.390340 TCTGATTGGCAGTGTCGCTC 60.390 55.000 0.00 0.00 45.14 5.03
310 311 1.364626 CTGATTGGCAGTGTCGCTCC 61.365 60.000 0.00 0.00 39.85 4.70
311 312 2.045926 ATTGGCAGTGTCGCTCCC 60.046 61.111 0.00 0.00 0.00 4.30
312 313 2.527951 GATTGGCAGTGTCGCTCCCT 62.528 60.000 0.00 0.00 0.00 4.20
313 314 2.809861 ATTGGCAGTGTCGCTCCCTG 62.810 60.000 0.00 0.00 0.00 4.45
314 315 3.695606 GGCAGTGTCGCTCCCTGA 61.696 66.667 0.00 0.00 0.00 3.86
315 316 2.433318 GCAGTGTCGCTCCCTGAC 60.433 66.667 0.00 0.00 36.88 3.51
316 317 3.051210 CAGTGTCGCTCCCTGACA 58.949 61.111 0.00 0.00 43.68 3.58
317 318 1.367471 CAGTGTCGCTCCCTGACAA 59.633 57.895 0.00 0.00 46.99 3.18
318 319 0.249868 CAGTGTCGCTCCCTGACAAA 60.250 55.000 0.00 0.00 46.99 2.83
319 320 0.687354 AGTGTCGCTCCCTGACAAAT 59.313 50.000 0.00 0.00 46.99 2.32
320 321 1.899814 AGTGTCGCTCCCTGACAAATA 59.100 47.619 0.00 0.00 46.99 1.40
321 322 2.093973 AGTGTCGCTCCCTGACAAATAG 60.094 50.000 0.00 0.00 46.99 1.73
322 323 1.899814 TGTCGCTCCCTGACAAATAGT 59.100 47.619 0.00 0.00 42.99 2.12
323 324 3.093814 TGTCGCTCCCTGACAAATAGTA 58.906 45.455 0.00 0.00 42.99 1.82
324 325 3.130516 TGTCGCTCCCTGACAAATAGTAG 59.869 47.826 0.00 0.00 42.99 2.57
325 326 3.130693 GTCGCTCCCTGACAAATAGTAGT 59.869 47.826 0.00 0.00 36.37 2.73
326 327 4.337555 GTCGCTCCCTGACAAATAGTAGTA 59.662 45.833 0.00 0.00 36.37 1.82
327 328 4.337555 TCGCTCCCTGACAAATAGTAGTAC 59.662 45.833 0.00 0.00 0.00 2.73
328 329 4.097437 CGCTCCCTGACAAATAGTAGTACA 59.903 45.833 2.52 0.00 0.00 2.90
329 330 5.349809 GCTCCCTGACAAATAGTAGTACAC 58.650 45.833 2.52 0.00 0.00 2.90
330 331 5.105473 GCTCCCTGACAAATAGTAGTACACA 60.105 44.000 2.52 0.00 0.00 3.72
331 332 6.573680 GCTCCCTGACAAATAGTAGTACACAA 60.574 42.308 2.52 0.00 0.00 3.33
332 333 6.931838 TCCCTGACAAATAGTAGTACACAAG 58.068 40.000 2.52 0.00 0.00 3.16
333 334 6.495872 TCCCTGACAAATAGTAGTACACAAGT 59.504 38.462 2.52 0.00 0.00 3.16
334 335 7.670979 TCCCTGACAAATAGTAGTACACAAGTA 59.329 37.037 2.52 0.00 0.00 2.24
335 336 7.974501 CCCTGACAAATAGTAGTACACAAGTAG 59.025 40.741 2.52 0.00 0.00 2.57
336 337 8.521176 CCTGACAAATAGTAGTACACAAGTAGT 58.479 37.037 2.52 0.00 37.61 2.73
356 357 8.164058 AGTAGTACTACTTGATTAATCCCGAC 57.836 38.462 26.61 1.34 43.35 4.79
357 358 6.069684 AGTACTACTTGATTAATCCCGACG 57.930 41.667 12.90 1.98 0.00 5.12
358 359 4.317671 ACTACTTGATTAATCCCGACGG 57.682 45.455 12.90 6.99 0.00 4.79
359 360 2.614829 ACTTGATTAATCCCGACGGG 57.385 50.000 27.86 27.86 46.11 5.28
372 373 3.388841 ACGGGAGTAGTTGGCCTG 58.611 61.111 3.32 0.00 44.60 4.85
373 374 1.535687 ACGGGAGTAGTTGGCCTGT 60.536 57.895 3.32 0.00 44.60 4.00
374 375 1.125711 ACGGGAGTAGTTGGCCTGTT 61.126 55.000 3.32 0.00 44.60 3.16
375 376 0.036306 CGGGAGTAGTTGGCCTGTTT 59.964 55.000 3.32 0.00 0.00 2.83
376 377 1.544759 CGGGAGTAGTTGGCCTGTTTT 60.545 52.381 3.32 0.00 0.00 2.43
377 378 2.594131 GGGAGTAGTTGGCCTGTTTTT 58.406 47.619 3.32 0.00 0.00 1.94
378 379 3.758425 GGGAGTAGTTGGCCTGTTTTTA 58.242 45.455 3.32 0.00 0.00 1.52
379 380 4.146564 GGGAGTAGTTGGCCTGTTTTTAA 58.853 43.478 3.32 0.00 0.00 1.52
380 381 4.770531 GGGAGTAGTTGGCCTGTTTTTAAT 59.229 41.667 3.32 0.00 0.00 1.40
381 382 5.105877 GGGAGTAGTTGGCCTGTTTTTAATC 60.106 44.000 3.32 0.00 0.00 1.75
382 383 5.710567 GGAGTAGTTGGCCTGTTTTTAATCT 59.289 40.000 3.32 0.00 0.00 2.40
383 384 6.208797 GGAGTAGTTGGCCTGTTTTTAATCTT 59.791 38.462 3.32 0.00 0.00 2.40
384 385 7.215719 AGTAGTTGGCCTGTTTTTAATCTTC 57.784 36.000 3.32 0.00 0.00 2.87
385 386 6.775629 AGTAGTTGGCCTGTTTTTAATCTTCA 59.224 34.615 3.32 0.00 0.00 3.02
386 387 5.842907 AGTTGGCCTGTTTTTAATCTTCAC 58.157 37.500 3.32 0.00 0.00 3.18
387 388 4.864704 TGGCCTGTTTTTAATCTTCACC 57.135 40.909 3.32 0.00 0.00 4.02
388 389 4.479158 TGGCCTGTTTTTAATCTTCACCT 58.521 39.130 3.32 0.00 0.00 4.00
389 390 4.280677 TGGCCTGTTTTTAATCTTCACCTG 59.719 41.667 3.32 0.00 0.00 4.00
390 391 4.321974 GGCCTGTTTTTAATCTTCACCTGG 60.322 45.833 0.00 0.00 0.00 4.45
391 392 4.321974 GCCTGTTTTTAATCTTCACCTGGG 60.322 45.833 0.00 0.00 0.00 4.45
392 393 5.076873 CCTGTTTTTAATCTTCACCTGGGA 58.923 41.667 0.00 0.00 0.00 4.37
393 394 5.538433 CCTGTTTTTAATCTTCACCTGGGAA 59.462 40.000 0.00 0.00 0.00 3.97
394 395 6.399639 TGTTTTTAATCTTCACCTGGGAAC 57.600 37.500 0.00 0.00 0.00 3.62
395 396 6.133356 TGTTTTTAATCTTCACCTGGGAACT 58.867 36.000 0.00 0.00 0.00 3.01
396 397 6.040391 TGTTTTTAATCTTCACCTGGGAACTG 59.960 38.462 0.00 0.00 0.00 3.16
397 398 5.576563 TTTAATCTTCACCTGGGAACTGA 57.423 39.130 0.00 0.00 0.00 3.41
398 399 5.779241 TTAATCTTCACCTGGGAACTGAT 57.221 39.130 0.00 0.00 0.00 2.90
399 400 3.641434 ATCTTCACCTGGGAACTGATG 57.359 47.619 0.00 0.00 0.00 3.07
400 401 2.619931 TCTTCACCTGGGAACTGATGA 58.380 47.619 0.00 0.00 0.00 2.92
401 402 2.978978 TCTTCACCTGGGAACTGATGAA 59.021 45.455 0.00 0.00 0.00 2.57
402 403 3.588842 TCTTCACCTGGGAACTGATGAAT 59.411 43.478 0.00 0.00 0.00 2.57
403 404 3.634397 TCACCTGGGAACTGATGAATC 57.366 47.619 0.00 0.00 0.00 2.52
404 405 2.093500 TCACCTGGGAACTGATGAATCG 60.093 50.000 0.00 0.00 0.00 3.34
405 406 1.303309 CCTGGGAACTGATGAATCGC 58.697 55.000 0.00 0.00 0.00 4.58
406 407 1.134280 CCTGGGAACTGATGAATCGCT 60.134 52.381 0.00 0.00 0.00 4.93
407 408 2.208431 CTGGGAACTGATGAATCGCTC 58.792 52.381 0.00 0.00 0.00 5.03
408 409 1.554617 TGGGAACTGATGAATCGCTCA 59.445 47.619 0.00 0.00 38.81 4.26
409 410 2.027285 TGGGAACTGATGAATCGCTCAA 60.027 45.455 0.00 0.00 37.67 3.02
410 411 3.209410 GGGAACTGATGAATCGCTCAAT 58.791 45.455 0.00 0.00 37.67 2.57
411 412 3.003068 GGGAACTGATGAATCGCTCAATG 59.997 47.826 0.00 0.00 37.67 2.82
412 413 3.547613 GGAACTGATGAATCGCTCAATGC 60.548 47.826 0.00 0.00 37.67 3.56
413 414 2.915349 ACTGATGAATCGCTCAATGCT 58.085 42.857 0.00 0.00 37.67 3.79
414 415 4.063998 ACTGATGAATCGCTCAATGCTA 57.936 40.909 0.00 0.00 37.67 3.49
415 416 4.445453 ACTGATGAATCGCTCAATGCTAA 58.555 39.130 0.00 0.00 37.67 3.09
416 417 4.272018 ACTGATGAATCGCTCAATGCTAAC 59.728 41.667 0.00 0.00 37.67 2.34
417 418 4.190772 TGATGAATCGCTCAATGCTAACA 58.809 39.130 0.00 0.00 37.67 2.41
418 419 4.034394 TGATGAATCGCTCAATGCTAACAC 59.966 41.667 0.00 0.00 37.67 3.32
419 420 3.599343 TGAATCGCTCAATGCTAACACT 58.401 40.909 0.00 0.00 40.11 3.55
420 421 4.754322 TGAATCGCTCAATGCTAACACTA 58.246 39.130 0.00 0.00 40.11 2.74
421 422 4.566759 TGAATCGCTCAATGCTAACACTAC 59.433 41.667 0.00 0.00 40.11 2.73
422 423 3.586100 TCGCTCAATGCTAACACTACA 57.414 42.857 0.00 0.00 40.11 2.74
423 424 3.920446 TCGCTCAATGCTAACACTACAA 58.080 40.909 0.00 0.00 40.11 2.41
424 425 4.311606 TCGCTCAATGCTAACACTACAAA 58.688 39.130 0.00 0.00 40.11 2.83
425 426 4.752604 TCGCTCAATGCTAACACTACAAAA 59.247 37.500 0.00 0.00 40.11 2.44
426 427 5.237561 TCGCTCAATGCTAACACTACAAAAA 59.762 36.000 0.00 0.00 40.11 1.94
446 447 5.931441 AAAAGAAATTGTCTCAGTCTCGG 57.069 39.130 0.00 0.00 34.56 4.63
447 448 4.873746 AAGAAATTGTCTCAGTCTCGGA 57.126 40.909 0.00 0.00 34.56 4.55
448 449 4.181309 AGAAATTGTCTCAGTCTCGGAC 57.819 45.455 0.00 0.00 0.00 4.79
449 450 3.829601 AGAAATTGTCTCAGTCTCGGACT 59.170 43.478 1.23 1.23 44.44 3.85
450 451 3.859411 AATTGTCTCAGTCTCGGACTC 57.141 47.619 3.87 0.00 41.37 3.36
451 452 1.157585 TTGTCTCAGTCTCGGACTCG 58.842 55.000 3.87 1.91 41.37 4.18
452 453 0.673956 TGTCTCAGTCTCGGACTCGG 60.674 60.000 3.87 1.58 41.37 4.63
453 454 1.745864 TCTCAGTCTCGGACTCGGC 60.746 63.158 3.87 0.00 41.37 5.54
454 455 3.102107 CTCAGTCTCGGACTCGGCG 62.102 68.421 0.00 0.00 41.37 6.46
455 456 4.180946 CAGTCTCGGACTCGGCGG 62.181 72.222 7.21 0.00 41.37 6.13
456 457 4.405671 AGTCTCGGACTCGGCGGA 62.406 66.667 7.21 0.00 38.71 5.54
457 458 4.176851 GTCTCGGACTCGGCGGAC 62.177 72.222 7.21 0.04 36.95 4.79
458 459 4.405671 TCTCGGACTCGGCGGACT 62.406 66.667 7.21 0.00 36.95 3.85
459 460 4.180946 CTCGGACTCGGCGGACTG 62.181 72.222 7.21 3.71 36.95 3.51
461 462 4.052229 CGGACTCGGCGGACTGTT 62.052 66.667 7.21 0.00 0.00 3.16
462 463 2.432628 GGACTCGGCGGACTGTTG 60.433 66.667 7.21 0.00 0.00 3.33
463 464 2.649034 GACTCGGCGGACTGTTGA 59.351 61.111 7.21 0.00 0.00 3.18
464 465 1.444553 GACTCGGCGGACTGTTGAG 60.445 63.158 7.21 0.00 0.00 3.02
465 466 2.143594 GACTCGGCGGACTGTTGAGT 62.144 60.000 7.21 9.46 42.25 3.41
466 467 0.892358 ACTCGGCGGACTGTTGAGTA 60.892 55.000 7.21 0.00 38.09 2.59
467 468 0.456312 CTCGGCGGACTGTTGAGTAC 60.456 60.000 7.21 0.00 30.16 2.73
468 469 0.892358 TCGGCGGACTGTTGAGTACT 60.892 55.000 7.21 0.00 29.53 2.73
469 470 0.456312 CGGCGGACTGTTGAGTACTC 60.456 60.000 16.32 16.32 29.53 2.59
470 471 0.601558 GGCGGACTGTTGAGTACTCA 59.398 55.000 21.74 21.74 37.91 3.41
471 472 1.000506 GGCGGACTGTTGAGTACTCAA 59.999 52.381 30.07 30.07 46.27 3.02
483 484 5.984695 TGAGTACTCAACAGTGCTAATCT 57.015 39.130 23.24 0.00 44.93 2.40
484 485 6.346477 TGAGTACTCAACAGTGCTAATCTT 57.654 37.500 23.24 0.00 44.93 2.40
485 486 6.390721 TGAGTACTCAACAGTGCTAATCTTC 58.609 40.000 23.24 0.00 44.93 2.87
486 487 6.015434 TGAGTACTCAACAGTGCTAATCTTCA 60.015 38.462 23.24 0.00 44.93 3.02
487 488 6.159988 AGTACTCAACAGTGCTAATCTTCAC 58.840 40.000 0.00 0.00 43.27 3.18
488 489 4.319177 ACTCAACAGTGCTAATCTTCACC 58.681 43.478 0.00 0.00 33.90 4.02
489 490 4.040952 ACTCAACAGTGCTAATCTTCACCT 59.959 41.667 0.00 0.00 33.90 4.00
490 491 4.318332 TCAACAGTGCTAATCTTCACCTG 58.682 43.478 0.00 0.00 33.90 4.00
491 492 3.340814 ACAGTGCTAATCTTCACCTGG 57.659 47.619 0.00 0.00 33.90 4.45
492 493 2.026822 ACAGTGCTAATCTTCACCTGGG 60.027 50.000 0.00 0.00 33.90 4.45
493 494 2.237143 CAGTGCTAATCTTCACCTGGGA 59.763 50.000 0.00 0.00 33.90 4.37
494 495 2.237392 AGTGCTAATCTTCACCTGGGAC 59.763 50.000 0.00 0.00 33.90 4.46
495 496 2.237392 GTGCTAATCTTCACCTGGGACT 59.763 50.000 0.00 0.00 0.00 3.85
496 497 2.912956 TGCTAATCTTCACCTGGGACTT 59.087 45.455 0.00 0.00 0.00 3.01
497 498 3.274288 GCTAATCTTCACCTGGGACTTG 58.726 50.000 0.00 0.00 0.00 3.16
498 499 3.055094 GCTAATCTTCACCTGGGACTTGA 60.055 47.826 0.00 0.00 0.00 3.02
499 500 4.565652 GCTAATCTTCACCTGGGACTTGAA 60.566 45.833 0.00 0.00 0.00 2.69
500 501 2.930826 TCTTCACCTGGGACTTGAAC 57.069 50.000 0.00 0.00 0.00 3.18
501 502 1.420138 TCTTCACCTGGGACTTGAACC 59.580 52.381 0.00 0.00 0.00 3.62
502 503 0.476771 TTCACCTGGGACTTGAACCC 59.523 55.000 0.00 0.00 46.87 4.11
507 508 2.439245 GGGACTTGAACCCACCCC 59.561 66.667 0.00 0.00 46.05 4.95
508 509 2.466186 GGGACTTGAACCCACCCCA 61.466 63.158 0.00 0.00 46.05 4.96
509 510 1.228459 GGACTTGAACCCACCCCAC 60.228 63.158 0.00 0.00 0.00 4.61
510 511 1.228459 GACTTGAACCCACCCCACC 60.228 63.158 0.00 0.00 0.00 4.61
511 512 2.002018 GACTTGAACCCACCCCACCA 62.002 60.000 0.00 0.00 0.00 4.17
512 513 1.368268 ACTTGAACCCACCCCACCAT 61.368 55.000 0.00 0.00 0.00 3.55
513 514 0.701731 CTTGAACCCACCCCACCATA 59.298 55.000 0.00 0.00 0.00 2.74
514 515 0.406361 TTGAACCCACCCCACCATAC 59.594 55.000 0.00 0.00 0.00 2.39
515 516 0.476808 TGAACCCACCCCACCATACT 60.477 55.000 0.00 0.00 0.00 2.12
516 517 0.702316 GAACCCACCCCACCATACTT 59.298 55.000 0.00 0.00 0.00 2.24
517 518 1.076513 GAACCCACCCCACCATACTTT 59.923 52.381 0.00 0.00 0.00 2.66
518 519 1.163408 ACCCACCCCACCATACTTTT 58.837 50.000 0.00 0.00 0.00 2.27
523 524 3.006430 CCACCCCACCATACTTTTGTTTC 59.994 47.826 0.00 0.00 0.00 2.78
538 539 4.829064 TTGTTTCTCCAAATTGAGACGG 57.171 40.909 0.00 0.00 40.98 4.79
693 694 3.187700 GCAATTGTCAGGTCTACCTACG 58.812 50.000 7.40 0.00 46.65 3.51
780 781 7.434013 GCTCTACAAGTACTTATCTCTTTCTGC 59.566 40.741 8.04 0.00 0.00 4.26
798 799 3.379372 TCTGCATCATCCTTTTAAGCAGC 59.621 43.478 0.00 0.00 45.45 5.25
800 801 3.379372 TGCATCATCCTTTTAAGCAGCTC 59.621 43.478 0.00 0.00 0.00 4.09
802 803 3.719268 TCATCCTTTTAAGCAGCTCCA 57.281 42.857 0.00 0.00 0.00 3.86
831 832 8.664798 CATTGTCTCATCAATTTTACCGAACTA 58.335 33.333 0.00 0.00 36.10 2.24
832 833 8.786826 TTGTCTCATCAATTTTACCGAACTAT 57.213 30.769 0.00 0.00 0.00 2.12
1169 1173 3.025262 TCAATGCAAATGCTGAGCCATA 58.975 40.909 0.23 0.00 42.66 2.74
1296 1300 6.633500 TTTTTCCGTGTCATTCTTCTGAAT 57.367 33.333 0.00 0.00 43.10 2.57
1560 1573 7.453393 TCTGAATCTGACTCTTAATGGTGTTT 58.547 34.615 0.00 0.00 0.00 2.83
1720 1733 1.302511 GCCATCGGTCAAGTGTGGT 60.303 57.895 0.00 0.00 32.56 4.16
1732 1745 0.889306 AGTGTGGTTAGTCGAGGCTC 59.111 55.000 3.87 3.87 0.00 4.70
1771 1784 0.459585 GTTACAGGCCGCGAGATCAA 60.460 55.000 8.23 0.00 0.00 2.57
1777 1790 4.207281 CCGCGAGATCAAGCCGGA 62.207 66.667 8.23 0.00 31.91 5.14
1851 1864 2.095969 GTGTCTCAGTCTCTGACGTCTG 60.096 54.545 17.92 16.72 35.39 3.51
1894 1907 0.403655 TTGCATGGCAAGGACCACTA 59.596 50.000 0.00 0.00 43.99 2.74
1937 1950 6.554334 ACAACATTGTGTTTACGCTCTTAT 57.446 33.333 0.00 0.00 38.77 1.73
1938 1951 7.661127 ACAACATTGTGTTTACGCTCTTATA 57.339 32.000 0.00 0.00 38.77 0.98
2026 2040 4.276678 CGGCAATTGTGTGATAGAATGGAT 59.723 41.667 7.40 0.00 0.00 3.41
2035 2049 8.217131 TGTGTGATAGAATGGATTTGATTGAG 57.783 34.615 0.00 0.00 0.00 3.02
2036 2050 7.137426 GTGTGATAGAATGGATTTGATTGAGC 58.863 38.462 0.00 0.00 0.00 4.26
2037 2051 6.017687 TGTGATAGAATGGATTTGATTGAGCG 60.018 38.462 0.00 0.00 0.00 5.03
2039 2053 4.627611 AGAATGGATTTGATTGAGCGTG 57.372 40.909 0.00 0.00 0.00 5.34
2040 2054 3.379372 AGAATGGATTTGATTGAGCGTGG 59.621 43.478 0.00 0.00 0.00 4.94
2041 2055 1.462616 TGGATTTGATTGAGCGTGGG 58.537 50.000 0.00 0.00 0.00 4.61
2042 2056 1.004161 TGGATTTGATTGAGCGTGGGA 59.996 47.619 0.00 0.00 0.00 4.37
2043 2057 1.401905 GGATTTGATTGAGCGTGGGAC 59.598 52.381 0.00 0.00 0.00 4.46
2060 2109 1.197036 GGACAAAAACTGCTCGCTACC 59.803 52.381 0.00 0.00 0.00 3.18
2093 2142 6.840075 GGATACTAGTAGCGTTGGTAGTATG 58.160 44.000 11.81 0.00 38.32 2.39
2098 2147 3.765511 AGTAGCGTTGGTAGTATGGACAA 59.234 43.478 0.00 0.00 0.00 3.18
2171 2220 2.536761 TGGCACACGCTACTACTTTT 57.463 45.000 0.00 0.00 38.60 2.27
2172 2221 2.409975 TGGCACACGCTACTACTTTTC 58.590 47.619 0.00 0.00 38.60 2.29
2223 2275 7.930865 ACGCTACTACTAACTATTAGCTGTAGT 59.069 37.037 18.91 18.91 40.50 2.73
2225 2277 9.270640 GCTACTACTAACTATTAGCTGTAGTGA 57.729 37.037 21.39 8.18 40.50 3.41
2272 2324 3.433740 GCTGCTAGTAGCCATTTTACCCT 60.434 47.826 21.02 0.00 41.51 4.34
2302 2354 5.087391 AGTAGCCTTTTTCCTAGTAGTGC 57.913 43.478 0.00 0.00 0.00 4.40
2303 2355 3.351794 AGCCTTTTTCCTAGTAGTGCC 57.648 47.619 0.00 0.00 0.00 5.01
2304 2356 2.026169 AGCCTTTTTCCTAGTAGTGCCC 60.026 50.000 0.00 0.00 0.00 5.36
2305 2357 2.290705 GCCTTTTTCCTAGTAGTGCCCA 60.291 50.000 0.00 0.00 0.00 5.36
2306 2358 3.610911 CCTTTTTCCTAGTAGTGCCCAG 58.389 50.000 0.00 0.00 0.00 4.45
2324 2376 1.857837 CAGGCGCGTCAAATTGTTTTT 59.142 42.857 15.58 0.00 0.00 1.94
2347 2399 3.430333 AAAATGAAACGTTTGGCGAGT 57.570 38.095 20.10 0.00 44.77 4.18
2350 2402 2.181426 TGAAACGTTTGGCGAGTTTG 57.819 45.000 20.10 0.00 44.77 2.93
2351 2403 1.469308 TGAAACGTTTGGCGAGTTTGT 59.531 42.857 20.10 0.00 44.77 2.83
2352 2404 2.095161 TGAAACGTTTGGCGAGTTTGTT 60.095 40.909 20.10 0.00 44.77 2.83
2354 2406 3.761311 AACGTTTGGCGAGTTTGTTTA 57.239 38.095 0.00 0.00 44.77 2.01
2361 2413 3.427243 TGGCGAGTTTGTTTAAAACACG 58.573 40.909 13.83 13.83 41.97 4.49
2372 2424 8.544597 GTTTGTTTAAAACACGGCTAAATTCAT 58.455 29.630 0.00 0.00 41.97 2.57
2393 2445 1.135972 CCAAACTTCGGCGAGTTCATG 60.136 52.381 19.64 15.86 38.86 3.07
2446 2498 2.908940 GCTACTAGGCCCGCCGTA 60.909 66.667 0.00 0.00 41.95 4.02
2491 2544 1.630369 TGCCCTTGAAGCTCTACATGT 59.370 47.619 2.69 2.69 0.00 3.21
2493 2546 2.544685 CCCTTGAAGCTCTACATGTCG 58.455 52.381 0.00 0.00 0.00 4.35
2495 2548 3.182967 CCTTGAAGCTCTACATGTCGAC 58.817 50.000 9.11 9.11 0.00 4.20
2497 2550 1.810755 TGAAGCTCTACATGTCGACGT 59.189 47.619 11.62 7.97 0.00 4.34
2499 2552 0.452184 AGCTCTACATGTCGACGTGG 59.548 55.000 34.44 21.29 37.19 4.94
2508 2561 0.039798 TGTCGACGTGGCTGTAGAAC 60.040 55.000 11.62 0.00 0.00 3.01
2617 2688 3.117171 CGTCCTCGTCCTCGTCGT 61.117 66.667 0.00 0.00 38.33 4.34
2623 2694 2.501222 CGTCCTCGTCGTTGTCGG 60.501 66.667 0.00 0.00 37.69 4.79
2686 2757 1.191489 GGCTATCTCCTCCAGGGCTC 61.191 65.000 0.00 0.00 35.41 4.70
2688 2759 0.111446 CTATCTCCTCCAGGGCTCGA 59.889 60.000 0.00 0.00 35.41 4.04
2689 2760 0.178987 TATCTCCTCCAGGGCTCGAC 60.179 60.000 0.00 0.00 35.41 4.20
2709 2780 2.678580 TGCCGGACCATCTCGTCA 60.679 61.111 5.05 0.00 34.24 4.35
2710 2781 2.202756 GCCGGACCATCTCGTCAC 60.203 66.667 5.05 0.00 34.24 3.67
2712 2783 2.404186 CCGGACCATCTCGTCACGA 61.404 63.158 0.00 0.00 34.24 4.35
2747 2818 3.829577 CCCATTTTAGGGCCTCCTC 57.170 57.895 10.74 0.00 43.66 3.71
2760 2831 2.355502 TCCTCGTCGGAGAAGCCT 59.644 61.111 0.00 0.00 43.27 4.58
2763 2834 3.743091 CTCGTCGGAGAAGCCTCGC 62.743 68.421 0.00 0.00 43.27 5.03
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.141254 TGTTACTTTGGGCGTGAAGGA 59.859 47.619 0.00 0.00 0.00 3.36
3 4 2.920524 TCTTGTTACTTTGGGCGTGAA 58.079 42.857 0.00 0.00 0.00 3.18
4 5 2.623878 TCTTGTTACTTTGGGCGTGA 57.376 45.000 0.00 0.00 0.00 4.35
5 6 3.915437 ATTCTTGTTACTTTGGGCGTG 57.085 42.857 0.00 0.00 0.00 5.34
6 7 4.822896 TGTTATTCTTGTTACTTTGGGCGT 59.177 37.500 0.00 0.00 0.00 5.68
7 8 5.365403 TGTTATTCTTGTTACTTTGGGCG 57.635 39.130 0.00 0.00 0.00 6.13
8 9 7.870445 TCAATTGTTATTCTTGTTACTTTGGGC 59.130 33.333 5.13 0.00 0.00 5.36
9 10 9.927668 ATCAATTGTTATTCTTGTTACTTTGGG 57.072 29.630 5.13 0.00 0.00 4.12
14 15 9.533831 AGGGAATCAATTGTTATTCTTGTTACT 57.466 29.630 15.60 6.16 33.50 2.24
17 18 8.971073 CCTAGGGAATCAATTGTTATTCTTGTT 58.029 33.333 15.60 5.92 33.50 2.83
18 19 7.561356 CCCTAGGGAATCAATTGTTATTCTTGT 59.439 37.037 24.99 6.93 37.50 3.16
19 20 7.779798 TCCCTAGGGAATCAATTGTTATTCTTG 59.220 37.037 29.24 0.00 42.05 3.02
20 21 7.882755 TCCCTAGGGAATCAATTGTTATTCTT 58.117 34.615 29.24 9.54 42.05 2.52
21 22 7.465900 TCCCTAGGGAATCAATTGTTATTCT 57.534 36.000 29.24 8.42 42.05 2.40
34 35 2.486907 CGACTACGAGTCCCTAGGGAAT 60.487 54.545 32.73 31.64 46.04 3.01
35 36 1.134280 CGACTACGAGTCCCTAGGGAA 60.134 57.143 32.73 15.52 42.12 3.97
36 37 0.467384 CGACTACGAGTCCCTAGGGA 59.533 60.000 27.73 27.73 42.12 4.20
37 38 0.467384 TCGACTACGAGTCCCTAGGG 59.533 60.000 23.22 23.22 42.12 3.53
46 47 7.514968 CAGAATCATCTCCGTCGACTACGAG 62.515 52.000 14.70 14.63 43.90 4.18
47 48 5.789162 CAGAATCATCTCCGTCGACTACGA 61.789 50.000 14.70 6.98 43.90 3.43
48 49 3.605002 CAGAATCATCTCCGTCGACTACG 60.605 52.174 14.70 0.38 42.05 3.51
49 50 3.850374 GCAGAATCATCTCCGTCGACTAC 60.850 52.174 14.70 0.00 32.03 2.73
50 51 2.290916 GCAGAATCATCTCCGTCGACTA 59.709 50.000 14.70 0.31 32.03 2.59
51 52 1.066303 GCAGAATCATCTCCGTCGACT 59.934 52.381 14.70 0.00 32.03 4.18
52 53 1.482278 GCAGAATCATCTCCGTCGAC 58.518 55.000 5.18 5.18 32.03 4.20
53 54 0.385751 GGCAGAATCATCTCCGTCGA 59.614 55.000 0.00 0.00 32.03 4.20
54 55 0.936764 CGGCAGAATCATCTCCGTCG 60.937 60.000 7.90 0.00 39.47 5.12
55 56 0.598680 CCGGCAGAATCATCTCCGTC 60.599 60.000 0.00 0.00 41.12 4.79
56 57 1.043116 TCCGGCAGAATCATCTCCGT 61.043 55.000 0.00 0.00 41.12 4.69
57 58 0.104855 TTCCGGCAGAATCATCTCCG 59.895 55.000 0.00 8.69 41.75 4.63
58 59 2.332063 TTTCCGGCAGAATCATCTCC 57.668 50.000 0.00 0.00 33.44 3.71
59 60 2.478134 CGATTTCCGGCAGAATCATCTC 59.522 50.000 18.67 1.39 33.44 2.75
60 61 2.487934 CGATTTCCGGCAGAATCATCT 58.512 47.619 18.67 0.00 33.44 2.90
61 62 2.957576 CGATTTCCGGCAGAATCATC 57.042 50.000 18.67 0.65 33.44 2.92
72 73 1.373590 ATCCAAACCGCCGATTTCCG 61.374 55.000 0.00 0.00 38.18 4.30
73 74 1.332686 GTATCCAAACCGCCGATTTCC 59.667 52.381 0.00 0.00 0.00 3.13
74 75 1.004292 CGTATCCAAACCGCCGATTTC 60.004 52.381 0.00 0.00 0.00 2.17
75 76 1.011333 CGTATCCAAACCGCCGATTT 58.989 50.000 0.00 0.00 0.00 2.17
76 77 0.812412 CCGTATCCAAACCGCCGATT 60.812 55.000 0.00 0.00 0.00 3.34
77 78 1.227438 CCGTATCCAAACCGCCGAT 60.227 57.895 0.00 0.00 0.00 4.18
78 79 2.184836 CCGTATCCAAACCGCCGA 59.815 61.111 0.00 0.00 0.00 5.54
79 80 2.893404 CCCGTATCCAAACCGCCG 60.893 66.667 0.00 0.00 0.00 6.46
80 81 1.816679 GTCCCGTATCCAAACCGCC 60.817 63.158 0.00 0.00 0.00 6.13
81 82 0.808847 GAGTCCCGTATCCAAACCGC 60.809 60.000 0.00 0.00 0.00 5.68
82 83 0.179092 GGAGTCCCGTATCCAAACCG 60.179 60.000 0.00 0.00 35.54 4.44
83 84 3.774616 GGAGTCCCGTATCCAAACC 57.225 57.895 0.00 0.00 35.54 3.27
101 102 2.239341 TACGTAACTCGCCGTCACCG 62.239 60.000 0.00 0.00 44.19 4.94
102 103 0.794605 GTACGTAACTCGCCGTCACC 60.795 60.000 0.00 0.00 44.19 4.02
103 104 0.166814 AGTACGTAACTCGCCGTCAC 59.833 55.000 0.00 0.00 44.19 3.67
104 105 1.720805 TAGTACGTAACTCGCCGTCA 58.279 50.000 0.00 0.00 44.19 4.35
105 106 2.806288 TTAGTACGTAACTCGCCGTC 57.194 50.000 0.00 0.00 44.19 4.79
106 107 3.234386 GTTTTAGTACGTAACTCGCCGT 58.766 45.455 0.00 0.00 44.19 5.68
107 108 3.233578 TGTTTTAGTACGTAACTCGCCG 58.766 45.455 0.00 0.00 44.19 6.46
108 109 5.388786 CCTTTGTTTTAGTACGTAACTCGCC 60.389 44.000 0.00 0.00 44.19 5.54
109 110 5.175673 ACCTTTGTTTTAGTACGTAACTCGC 59.824 40.000 0.00 0.00 44.19 5.03
110 111 6.346040 CCACCTTTGTTTTAGTACGTAACTCG 60.346 42.308 0.00 0.00 46.00 4.18
111 112 6.073602 CCCACCTTTGTTTTAGTACGTAACTC 60.074 42.308 0.00 0.00 39.80 3.01
112 113 5.759763 CCCACCTTTGTTTTAGTACGTAACT 59.240 40.000 0.00 0.00 42.62 2.24
113 114 5.049474 CCCCACCTTTGTTTTAGTACGTAAC 60.049 44.000 0.00 0.00 0.00 2.50
114 115 5.062528 CCCCACCTTTGTTTTAGTACGTAA 58.937 41.667 0.00 0.00 0.00 3.18
115 116 4.640364 CCCCACCTTTGTTTTAGTACGTA 58.360 43.478 0.00 0.00 0.00 3.57
116 117 3.479489 CCCCACCTTTGTTTTAGTACGT 58.521 45.455 0.00 0.00 0.00 3.57
117 118 2.227149 GCCCCACCTTTGTTTTAGTACG 59.773 50.000 0.00 0.00 0.00 3.67
118 119 2.227149 CGCCCCACCTTTGTTTTAGTAC 59.773 50.000 0.00 0.00 0.00 2.73
119 120 2.106166 TCGCCCCACCTTTGTTTTAGTA 59.894 45.455 0.00 0.00 0.00 1.82
120 121 1.133730 TCGCCCCACCTTTGTTTTAGT 60.134 47.619 0.00 0.00 0.00 2.24
121 122 1.539827 CTCGCCCCACCTTTGTTTTAG 59.460 52.381 0.00 0.00 0.00 1.85
122 123 1.611519 CTCGCCCCACCTTTGTTTTA 58.388 50.000 0.00 0.00 0.00 1.52
123 124 1.112916 CCTCGCCCCACCTTTGTTTT 61.113 55.000 0.00 0.00 0.00 2.43
124 125 1.530655 CCTCGCCCCACCTTTGTTT 60.531 57.895 0.00 0.00 0.00 2.83
125 126 2.115266 CCTCGCCCCACCTTTGTT 59.885 61.111 0.00 0.00 0.00 2.83
126 127 4.660938 GCCTCGCCCCACCTTTGT 62.661 66.667 0.00 0.00 0.00 2.83
137 138 0.317854 GTGAAGTTGTTTGGCCTCGC 60.318 55.000 3.32 0.00 0.00 5.03
138 139 1.002468 CTGTGAAGTTGTTTGGCCTCG 60.002 52.381 3.32 0.00 0.00 4.63
139 140 2.033424 GTCTGTGAAGTTGTTTGGCCTC 59.967 50.000 3.32 0.00 0.00 4.70
140 141 2.024414 GTCTGTGAAGTTGTTTGGCCT 58.976 47.619 3.32 0.00 0.00 5.19
141 142 1.268539 CGTCTGTGAAGTTGTTTGGCC 60.269 52.381 0.00 0.00 0.00 5.36
142 143 1.400494 ACGTCTGTGAAGTTGTTTGGC 59.600 47.619 0.00 0.00 0.00 4.52
143 144 2.031683 GGACGTCTGTGAAGTTGTTTGG 59.968 50.000 16.46 0.00 0.00 3.28
144 145 2.285602 CGGACGTCTGTGAAGTTGTTTG 60.286 50.000 16.54 0.00 0.00 2.93
145 146 1.931172 CGGACGTCTGTGAAGTTGTTT 59.069 47.619 16.54 0.00 0.00 2.83
146 147 1.567504 CGGACGTCTGTGAAGTTGTT 58.432 50.000 16.54 0.00 0.00 2.83
147 148 0.249322 CCGGACGTCTGTGAAGTTGT 60.249 55.000 22.45 0.00 0.00 3.32
148 149 1.557443 GCCGGACGTCTGTGAAGTTG 61.557 60.000 22.45 6.89 0.00 3.16
149 150 1.300697 GCCGGACGTCTGTGAAGTT 60.301 57.895 22.45 0.00 0.00 2.66
150 151 2.338984 GCCGGACGTCTGTGAAGT 59.661 61.111 22.45 0.00 0.00 3.01
151 152 2.805353 CGCCGGACGTCTGTGAAG 60.805 66.667 22.45 8.67 36.87 3.02
152 153 4.351938 CCGCCGGACGTCTGTGAA 62.352 66.667 22.45 0.00 41.42 3.18
172 173 1.794222 GACCCTGCAATCGGTTTCG 59.206 57.895 1.60 0.00 37.82 3.46
173 174 1.794222 CGACCCTGCAATCGGTTTC 59.206 57.895 6.76 0.00 34.67 2.78
174 175 3.981308 CGACCCTGCAATCGGTTT 58.019 55.556 6.76 0.00 34.67 3.27
178 179 1.519455 GTCTCCGACCCTGCAATCG 60.519 63.158 7.52 7.52 38.08 3.34
179 180 1.519455 CGTCTCCGACCCTGCAATC 60.519 63.158 0.00 0.00 35.63 2.67
180 181 2.579201 CGTCTCCGACCCTGCAAT 59.421 61.111 0.00 0.00 35.63 3.56
181 182 3.691342 CCGTCTCCGACCCTGCAA 61.691 66.667 0.00 0.00 35.63 4.08
189 190 2.821366 GTAGTCGCCCGTCTCCGA 60.821 66.667 0.00 0.00 35.63 4.55
190 191 3.109612 CTGTAGTCGCCCGTCTCCG 62.110 68.421 0.00 0.00 0.00 4.63
191 192 2.799371 CTGTAGTCGCCCGTCTCC 59.201 66.667 0.00 0.00 0.00 3.71
192 193 2.102553 GCTGTAGTCGCCCGTCTC 59.897 66.667 0.00 0.00 0.00 3.36
193 194 2.361357 AGCTGTAGTCGCCCGTCT 60.361 61.111 0.00 0.00 0.00 4.18
194 195 2.102553 GAGCTGTAGTCGCCCGTC 59.897 66.667 0.00 0.00 0.00 4.79
195 196 3.812019 CGAGCTGTAGTCGCCCGT 61.812 66.667 0.00 0.00 0.00 5.28
196 197 2.537792 TTTCGAGCTGTAGTCGCCCG 62.538 60.000 0.00 0.00 37.35 6.13
197 198 1.077089 GTTTCGAGCTGTAGTCGCCC 61.077 60.000 0.00 0.00 37.35 6.13
198 199 1.077089 GGTTTCGAGCTGTAGTCGCC 61.077 60.000 0.00 0.00 37.35 5.54
199 200 1.403972 CGGTTTCGAGCTGTAGTCGC 61.404 60.000 0.00 0.00 37.35 5.19
200 201 0.109873 ACGGTTTCGAGCTGTAGTCG 60.110 55.000 0.00 0.00 40.11 4.18
201 202 1.335689 ACACGGTTTCGAGCTGTAGTC 60.336 52.381 0.00 0.00 40.11 2.59
202 203 0.672342 ACACGGTTTCGAGCTGTAGT 59.328 50.000 0.00 3.11 40.11 2.73
203 204 1.719780 GAACACGGTTTCGAGCTGTAG 59.280 52.381 0.00 2.63 40.11 2.74
204 205 1.603678 GGAACACGGTTTCGAGCTGTA 60.604 52.381 0.00 0.00 40.11 2.74
205 206 0.878961 GGAACACGGTTTCGAGCTGT 60.879 55.000 0.00 0.00 40.11 4.40
206 207 0.600255 AGGAACACGGTTTCGAGCTG 60.600 55.000 0.00 0.00 40.11 4.24
207 208 0.600255 CAGGAACACGGTTTCGAGCT 60.600 55.000 0.00 0.00 40.11 4.09
208 209 0.878961 ACAGGAACACGGTTTCGAGC 60.879 55.000 0.00 0.00 40.11 5.03
209 210 1.137513 GACAGGAACACGGTTTCGAG 58.862 55.000 0.00 0.00 40.11 4.04
210 211 0.249573 GGACAGGAACACGGTTTCGA 60.250 55.000 0.00 0.00 40.11 3.71
211 212 0.531090 TGGACAGGAACACGGTTTCG 60.531 55.000 0.00 0.00 43.02 3.46
212 213 1.670791 TTGGACAGGAACACGGTTTC 58.329 50.000 0.00 0.00 0.00 2.78
213 214 1.746787 GTTTGGACAGGAACACGGTTT 59.253 47.619 0.00 0.00 0.00 3.27
214 215 1.064979 AGTTTGGACAGGAACACGGTT 60.065 47.619 0.00 0.00 0.00 4.44
215 216 0.544697 AGTTTGGACAGGAACACGGT 59.455 50.000 0.00 0.00 0.00 4.83
216 217 1.226746 GAGTTTGGACAGGAACACGG 58.773 55.000 0.00 0.00 0.00 4.94
217 218 0.859232 CGAGTTTGGACAGGAACACG 59.141 55.000 0.00 0.00 34.59 4.49
218 219 0.586802 GCGAGTTTGGACAGGAACAC 59.413 55.000 0.00 0.00 0.00 3.32
219 220 0.468226 AGCGAGTTTGGACAGGAACA 59.532 50.000 0.00 0.00 0.00 3.18
220 221 1.531578 GAAGCGAGTTTGGACAGGAAC 59.468 52.381 0.00 0.00 0.00 3.62
221 222 1.542547 GGAAGCGAGTTTGGACAGGAA 60.543 52.381 0.00 0.00 0.00 3.36
222 223 0.034896 GGAAGCGAGTTTGGACAGGA 59.965 55.000 0.00 0.00 0.00 3.86
223 224 1.291877 CGGAAGCGAGTTTGGACAGG 61.292 60.000 0.00 0.00 0.00 4.00
224 225 1.291877 CCGGAAGCGAGTTTGGACAG 61.292 60.000 0.00 0.00 0.00 3.51
225 226 1.301401 CCGGAAGCGAGTTTGGACA 60.301 57.895 0.00 0.00 0.00 4.02
226 227 2.033194 CCCGGAAGCGAGTTTGGAC 61.033 63.158 0.73 0.00 0.00 4.02
227 228 2.345991 CCCGGAAGCGAGTTTGGA 59.654 61.111 0.73 0.00 0.00 3.53
228 229 2.032071 ACCCGGAAGCGAGTTTGG 59.968 61.111 0.73 0.00 0.00 3.28
229 230 2.380410 CGACCCGGAAGCGAGTTTG 61.380 63.158 0.73 0.00 0.00 2.93
230 231 2.048503 CGACCCGGAAGCGAGTTT 60.049 61.111 0.73 0.00 0.00 2.66
231 232 3.300765 ACGACCCGGAAGCGAGTT 61.301 61.111 0.73 0.00 0.00 3.01
232 233 4.052229 CACGACCCGGAAGCGAGT 62.052 66.667 0.73 0.00 0.00 4.18
233 234 4.796231 CCACGACCCGGAAGCGAG 62.796 72.222 0.73 1.73 0.00 5.03
236 237 4.324991 AACCCACGACCCGGAAGC 62.325 66.667 0.73 0.00 0.00 3.86
237 238 2.358247 CAACCCACGACCCGGAAG 60.358 66.667 0.73 0.00 0.00 3.46
238 239 2.843411 TCAACCCACGACCCGGAA 60.843 61.111 0.73 0.00 0.00 4.30
239 240 3.618750 GTCAACCCACGACCCGGA 61.619 66.667 0.73 0.00 0.00 5.14
240 241 3.173167 AAGTCAACCCACGACCCGG 62.173 63.158 0.00 0.00 33.70 5.73
241 242 1.666872 GAAGTCAACCCACGACCCG 60.667 63.158 0.00 0.00 33.70 5.28
242 243 0.602905 CAGAAGTCAACCCACGACCC 60.603 60.000 0.00 0.00 33.70 4.46
243 244 0.391597 TCAGAAGTCAACCCACGACC 59.608 55.000 0.00 0.00 33.70 4.79
244 245 2.457366 ATCAGAAGTCAACCCACGAC 57.543 50.000 0.00 0.00 0.00 4.34
245 246 3.485463 AAATCAGAAGTCAACCCACGA 57.515 42.857 0.00 0.00 0.00 4.35
246 247 3.815401 AGAAAATCAGAAGTCAACCCACG 59.185 43.478 0.00 0.00 0.00 4.94
247 248 4.580580 ACAGAAAATCAGAAGTCAACCCAC 59.419 41.667 0.00 0.00 0.00 4.61
248 249 4.792068 ACAGAAAATCAGAAGTCAACCCA 58.208 39.130 0.00 0.00 0.00 4.51
249 250 5.774498 AACAGAAAATCAGAAGTCAACCC 57.226 39.130 0.00 0.00 0.00 4.11
250 251 6.693113 GTCAAACAGAAAATCAGAAGTCAACC 59.307 38.462 0.00 0.00 0.00 3.77
251 252 7.250569 TGTCAAACAGAAAATCAGAAGTCAAC 58.749 34.615 0.00 0.00 0.00 3.18
252 253 7.389803 TGTCAAACAGAAAATCAGAAGTCAA 57.610 32.000 0.00 0.00 0.00 3.18
268 269 0.806492 TACACGCACGCTGTCAAACA 60.806 50.000 2.41 0.00 0.00 2.83
269 270 0.382636 GTACACGCACGCTGTCAAAC 60.383 55.000 2.41 0.00 0.00 2.93
270 271 0.806492 TGTACACGCACGCTGTCAAA 60.806 50.000 0.00 0.00 0.00 2.69
271 272 0.598942 ATGTACACGCACGCTGTCAA 60.599 50.000 0.00 0.00 0.00 3.18
272 273 1.006688 ATGTACACGCACGCTGTCA 60.007 52.632 0.00 2.76 0.00 3.58
273 274 0.732880 AGATGTACACGCACGCTGTC 60.733 55.000 0.00 0.00 0.00 3.51
274 275 1.008875 CAGATGTACACGCACGCTGT 61.009 55.000 0.00 0.00 0.00 4.40
275 276 0.732538 TCAGATGTACACGCACGCTG 60.733 55.000 0.00 0.00 0.00 5.18
276 277 0.173481 ATCAGATGTACACGCACGCT 59.827 50.000 0.00 0.00 0.00 5.07
277 278 0.999406 AATCAGATGTACACGCACGC 59.001 50.000 0.00 0.00 0.00 5.34
278 279 1.324435 CCAATCAGATGTACACGCACG 59.676 52.381 0.00 0.00 0.00 5.34
279 280 1.062587 GCCAATCAGATGTACACGCAC 59.937 52.381 0.00 0.00 0.00 5.34
280 281 1.338579 TGCCAATCAGATGTACACGCA 60.339 47.619 0.00 0.00 0.00 5.24
281 282 1.328680 CTGCCAATCAGATGTACACGC 59.671 52.381 0.00 0.00 45.72 5.34
282 283 2.349580 CACTGCCAATCAGATGTACACG 59.650 50.000 0.00 0.00 45.72 4.49
283 284 3.338249 ACACTGCCAATCAGATGTACAC 58.662 45.455 0.00 0.00 45.72 2.90
284 285 3.599343 GACACTGCCAATCAGATGTACA 58.401 45.455 0.00 0.00 45.72 2.90
285 286 2.604914 CGACACTGCCAATCAGATGTAC 59.395 50.000 0.00 0.00 45.72 2.90
286 287 2.892374 CGACACTGCCAATCAGATGTA 58.108 47.619 0.00 0.00 45.72 2.29
287 288 1.730501 CGACACTGCCAATCAGATGT 58.269 50.000 0.00 0.37 45.72 3.06
288 289 0.376152 GCGACACTGCCAATCAGATG 59.624 55.000 0.00 0.00 45.72 2.90
289 290 0.251354 AGCGACACTGCCAATCAGAT 59.749 50.000 0.00 0.00 45.72 2.90
290 291 0.390340 GAGCGACACTGCCAATCAGA 60.390 55.000 0.00 0.00 45.72 3.27
292 293 1.375908 GGAGCGACACTGCCAATCA 60.376 57.895 0.00 0.00 34.65 2.57
293 294 3.490890 GGAGCGACACTGCCAATC 58.509 61.111 0.00 0.00 34.65 2.67
300 301 0.687354 ATTTGTCAGGGAGCGACACT 59.313 50.000 0.00 0.00 42.88 3.55
301 302 2.271800 CTATTTGTCAGGGAGCGACAC 58.728 52.381 0.00 0.00 42.88 3.67
302 303 1.899814 ACTATTTGTCAGGGAGCGACA 59.100 47.619 0.00 0.00 41.53 4.35
303 304 2.674796 ACTATTTGTCAGGGAGCGAC 57.325 50.000 0.00 0.00 0.00 5.19
304 305 3.362706 ACTACTATTTGTCAGGGAGCGA 58.637 45.455 0.00 0.00 0.00 4.93
305 306 3.802948 ACTACTATTTGTCAGGGAGCG 57.197 47.619 0.00 0.00 0.00 5.03
306 307 5.105473 TGTGTACTACTATTTGTCAGGGAGC 60.105 44.000 0.00 0.00 0.00 4.70
307 308 6.525578 TGTGTACTACTATTTGTCAGGGAG 57.474 41.667 0.00 0.00 0.00 4.30
308 309 6.495872 ACTTGTGTACTACTATTTGTCAGGGA 59.504 38.462 0.00 0.00 0.00 4.20
309 310 6.698380 ACTTGTGTACTACTATTTGTCAGGG 58.302 40.000 0.00 0.00 0.00 4.45
310 311 8.521176 ACTACTTGTGTACTACTATTTGTCAGG 58.479 37.037 0.00 0.00 0.00 3.86
332 333 7.074502 CGTCGGGATTAATCAAGTAGTACTAC 58.925 42.308 23.03 23.03 36.35 2.73
333 334 6.205464 CCGTCGGGATTAATCAAGTAGTACTA 59.795 42.308 17.07 0.00 34.06 1.82
334 335 5.009410 CCGTCGGGATTAATCAAGTAGTACT 59.991 44.000 17.07 0.00 34.06 2.73
335 336 5.218139 CCGTCGGGATTAATCAAGTAGTAC 58.782 45.833 17.07 0.00 34.06 2.73
336 337 5.443185 CCGTCGGGATTAATCAAGTAGTA 57.557 43.478 17.07 0.00 34.06 1.82
337 338 4.317671 CCGTCGGGATTAATCAAGTAGT 57.682 45.455 17.07 0.00 34.06 2.73
351 352 2.890371 CCAACTACTCCCGTCGGG 59.110 66.667 25.31 25.31 46.11 5.14
352 353 2.183555 GCCAACTACTCCCGTCGG 59.816 66.667 3.60 3.60 0.00 4.79
353 354 2.183555 GGCCAACTACTCCCGTCG 59.816 66.667 0.00 0.00 0.00 5.12
354 355 1.218316 CAGGCCAACTACTCCCGTC 59.782 63.158 5.01 0.00 0.00 4.79
355 356 1.125711 AACAGGCCAACTACTCCCGT 61.126 55.000 5.01 0.00 0.00 5.28
356 357 0.036306 AAACAGGCCAACTACTCCCG 59.964 55.000 5.01 0.00 0.00 5.14
357 358 2.287977 AAAACAGGCCAACTACTCCC 57.712 50.000 5.01 0.00 0.00 4.30
358 359 5.710567 AGATTAAAAACAGGCCAACTACTCC 59.289 40.000 5.01 0.00 0.00 3.85
359 360 6.819397 AGATTAAAAACAGGCCAACTACTC 57.181 37.500 5.01 0.00 0.00 2.59
360 361 6.775629 TGAAGATTAAAAACAGGCCAACTACT 59.224 34.615 5.01 0.00 0.00 2.57
361 362 6.861572 GTGAAGATTAAAAACAGGCCAACTAC 59.138 38.462 5.01 0.00 0.00 2.73
362 363 6.015772 GGTGAAGATTAAAAACAGGCCAACTA 60.016 38.462 5.01 0.00 0.00 2.24
363 364 5.221441 GGTGAAGATTAAAAACAGGCCAACT 60.221 40.000 5.01 0.00 0.00 3.16
364 365 4.988540 GGTGAAGATTAAAAACAGGCCAAC 59.011 41.667 5.01 0.00 0.00 3.77
365 366 4.898861 AGGTGAAGATTAAAAACAGGCCAA 59.101 37.500 5.01 0.00 0.00 4.52
366 367 4.280677 CAGGTGAAGATTAAAAACAGGCCA 59.719 41.667 5.01 0.00 0.00 5.36
367 368 4.321974 CCAGGTGAAGATTAAAAACAGGCC 60.322 45.833 0.00 0.00 0.00 5.19
368 369 4.321974 CCCAGGTGAAGATTAAAAACAGGC 60.322 45.833 0.00 0.00 0.00 4.85
369 370 5.076873 TCCCAGGTGAAGATTAAAAACAGG 58.923 41.667 0.00 0.00 0.00 4.00
370 371 6.265422 AGTTCCCAGGTGAAGATTAAAAACAG 59.735 38.462 0.00 0.00 0.00 3.16
371 372 6.040391 CAGTTCCCAGGTGAAGATTAAAAACA 59.960 38.462 0.00 0.00 0.00 2.83
372 373 6.264518 TCAGTTCCCAGGTGAAGATTAAAAAC 59.735 38.462 0.00 0.00 0.00 2.43
373 374 6.369629 TCAGTTCCCAGGTGAAGATTAAAAA 58.630 36.000 0.00 0.00 0.00 1.94
374 375 5.947663 TCAGTTCCCAGGTGAAGATTAAAA 58.052 37.500 0.00 0.00 0.00 1.52
375 376 5.576563 TCAGTTCCCAGGTGAAGATTAAA 57.423 39.130 0.00 0.00 0.00 1.52
376 377 5.250543 TCATCAGTTCCCAGGTGAAGATTAA 59.749 40.000 0.00 0.00 0.00 1.40
377 378 4.782691 TCATCAGTTCCCAGGTGAAGATTA 59.217 41.667 0.00 0.00 0.00 1.75
378 379 3.588842 TCATCAGTTCCCAGGTGAAGATT 59.411 43.478 0.00 0.00 0.00 2.40
379 380 3.184628 TCATCAGTTCCCAGGTGAAGAT 58.815 45.455 0.00 0.00 0.00 2.40
380 381 2.619931 TCATCAGTTCCCAGGTGAAGA 58.380 47.619 0.00 0.00 0.00 2.87
381 382 3.423539 TTCATCAGTTCCCAGGTGAAG 57.576 47.619 0.00 0.00 0.00 3.02
382 383 3.619733 CGATTCATCAGTTCCCAGGTGAA 60.620 47.826 0.00 0.00 0.00 3.18
383 384 2.093500 CGATTCATCAGTTCCCAGGTGA 60.093 50.000 0.00 0.00 0.00 4.02
384 385 2.283298 CGATTCATCAGTTCCCAGGTG 58.717 52.381 0.00 0.00 0.00 4.00
385 386 1.407437 GCGATTCATCAGTTCCCAGGT 60.407 52.381 0.00 0.00 0.00 4.00
386 387 1.134280 AGCGATTCATCAGTTCCCAGG 60.134 52.381 0.00 0.00 0.00 4.45
387 388 2.208431 GAGCGATTCATCAGTTCCCAG 58.792 52.381 0.00 0.00 0.00 4.45
388 389 1.554617 TGAGCGATTCATCAGTTCCCA 59.445 47.619 0.00 0.00 0.00 4.37
389 390 2.315925 TGAGCGATTCATCAGTTCCC 57.684 50.000 0.00 0.00 0.00 3.97
390 391 3.547613 GCATTGAGCGATTCATCAGTTCC 60.548 47.826 0.00 0.00 35.27 3.62
391 392 3.615614 GCATTGAGCGATTCATCAGTTC 58.384 45.455 0.00 0.00 35.27 3.01
392 393 3.687572 GCATTGAGCGATTCATCAGTT 57.312 42.857 0.00 0.00 35.27 3.16
423 424 6.017852 GTCCGAGACTGAGACAATTTCTTTTT 60.018 38.462 0.00 0.00 33.22 1.94
424 425 5.467063 GTCCGAGACTGAGACAATTTCTTTT 59.533 40.000 0.00 0.00 33.22 2.27
425 426 4.991687 GTCCGAGACTGAGACAATTTCTTT 59.008 41.667 0.00 0.00 33.22 2.52
426 427 4.282195 AGTCCGAGACTGAGACAATTTCTT 59.718 41.667 5.85 0.00 41.76 2.52
427 428 3.829601 AGTCCGAGACTGAGACAATTTCT 59.170 43.478 5.85 0.00 41.76 2.52
428 429 4.170256 GAGTCCGAGACTGAGACAATTTC 58.830 47.826 10.72 0.00 43.53 2.17
429 430 3.366476 CGAGTCCGAGACTGAGACAATTT 60.366 47.826 10.72 0.00 43.53 1.82
430 431 2.162608 CGAGTCCGAGACTGAGACAATT 59.837 50.000 10.72 0.00 43.53 2.32
431 432 1.740585 CGAGTCCGAGACTGAGACAAT 59.259 52.381 10.72 0.00 43.53 2.71
432 433 1.157585 CGAGTCCGAGACTGAGACAA 58.842 55.000 10.72 0.00 43.53 3.18
433 434 0.673956 CCGAGTCCGAGACTGAGACA 60.674 60.000 10.72 0.00 43.53 3.41
434 435 1.984321 GCCGAGTCCGAGACTGAGAC 61.984 65.000 10.72 0.00 43.53 3.36
435 436 1.745864 GCCGAGTCCGAGACTGAGA 60.746 63.158 10.72 0.00 43.53 3.27
436 437 2.795297 GCCGAGTCCGAGACTGAG 59.205 66.667 10.72 5.55 43.53 3.35
437 438 3.125573 CGCCGAGTCCGAGACTGA 61.126 66.667 10.72 0.00 43.53 3.41
438 439 4.180946 CCGCCGAGTCCGAGACTG 62.181 72.222 10.72 4.60 43.53 3.51
439 440 4.405671 TCCGCCGAGTCCGAGACT 62.406 66.667 6.29 6.29 46.42 3.24
440 441 4.176851 GTCCGCCGAGTCCGAGAC 62.177 72.222 0.00 0.00 38.22 3.36
441 442 4.405671 AGTCCGCCGAGTCCGAGA 62.406 66.667 0.00 0.00 38.22 4.04
442 443 4.180946 CAGTCCGCCGAGTCCGAG 62.181 72.222 0.00 0.00 38.22 4.63
444 445 4.052229 AACAGTCCGCCGAGTCCG 62.052 66.667 0.00 0.00 0.00 4.79
445 446 2.432628 CAACAGTCCGCCGAGTCC 60.433 66.667 0.00 0.00 0.00 3.85
446 447 1.444553 CTCAACAGTCCGCCGAGTC 60.445 63.158 0.00 0.00 0.00 3.36
447 448 0.892358 TACTCAACAGTCCGCCGAGT 60.892 55.000 0.00 0.00 40.03 4.18
448 449 0.456312 GTACTCAACAGTCCGCCGAG 60.456 60.000 0.00 0.00 33.62 4.63
449 450 0.892358 AGTACTCAACAGTCCGCCGA 60.892 55.000 0.00 0.00 33.62 5.54
450 451 0.456312 GAGTACTCAACAGTCCGCCG 60.456 60.000 18.20 0.00 33.62 6.46
451 452 0.601558 TGAGTACTCAACAGTCCGCC 59.398 55.000 23.24 0.00 36.53 6.13
452 453 2.433868 TTGAGTACTCAACAGTCCGC 57.566 50.000 30.07 0.00 43.90 5.54
460 461 6.346477 AGATTAGCACTGTTGAGTACTCAA 57.654 37.500 30.07 30.07 46.27 3.02
461 462 5.984695 AGATTAGCACTGTTGAGTACTCA 57.015 39.130 21.74 21.74 37.91 3.41
462 463 6.309251 GTGAAGATTAGCACTGTTGAGTACTC 59.691 42.308 16.32 16.32 28.15 2.59
463 464 6.159988 GTGAAGATTAGCACTGTTGAGTACT 58.840 40.000 0.00 0.00 30.40 2.73
464 465 5.348997 GGTGAAGATTAGCACTGTTGAGTAC 59.651 44.000 0.00 0.00 35.43 2.73
465 466 5.246203 AGGTGAAGATTAGCACTGTTGAGTA 59.754 40.000 0.00 0.00 35.43 2.59
466 467 4.040952 AGGTGAAGATTAGCACTGTTGAGT 59.959 41.667 0.00 0.00 35.43 3.41
467 468 4.391216 CAGGTGAAGATTAGCACTGTTGAG 59.609 45.833 0.00 0.00 35.43 3.02
468 469 4.318332 CAGGTGAAGATTAGCACTGTTGA 58.682 43.478 0.00 0.00 35.43 3.18
469 470 3.438087 CCAGGTGAAGATTAGCACTGTTG 59.562 47.826 0.00 0.00 35.43 3.33
470 471 3.560025 CCCAGGTGAAGATTAGCACTGTT 60.560 47.826 0.00 0.00 35.43 3.16
471 472 2.026822 CCCAGGTGAAGATTAGCACTGT 60.027 50.000 0.00 0.00 35.43 3.55
472 473 2.237143 TCCCAGGTGAAGATTAGCACTG 59.763 50.000 0.00 0.00 35.43 3.66
473 474 2.237392 GTCCCAGGTGAAGATTAGCACT 59.763 50.000 0.00 0.00 35.43 4.40
474 475 2.237392 AGTCCCAGGTGAAGATTAGCAC 59.763 50.000 0.00 0.00 0.00 4.40
475 476 2.551270 AGTCCCAGGTGAAGATTAGCA 58.449 47.619 0.00 0.00 0.00 3.49
476 477 3.055094 TCAAGTCCCAGGTGAAGATTAGC 60.055 47.826 0.00 0.00 0.00 3.09
477 478 4.826274 TCAAGTCCCAGGTGAAGATTAG 57.174 45.455 0.00 0.00 0.00 1.73
478 479 4.263331 GGTTCAAGTCCCAGGTGAAGATTA 60.263 45.833 0.00 0.00 32.15 1.75
479 480 3.498661 GGTTCAAGTCCCAGGTGAAGATT 60.499 47.826 0.00 0.00 32.15 2.40
480 481 2.040412 GGTTCAAGTCCCAGGTGAAGAT 59.960 50.000 0.00 0.00 32.15 2.40
481 482 1.420138 GGTTCAAGTCCCAGGTGAAGA 59.580 52.381 0.00 0.00 32.15 2.87
482 483 1.545651 GGGTTCAAGTCCCAGGTGAAG 60.546 57.143 0.00 0.00 44.05 3.02
483 484 0.476771 GGGTTCAAGTCCCAGGTGAA 59.523 55.000 0.00 0.00 44.05 3.18
484 485 2.151369 GGGTTCAAGTCCCAGGTGA 58.849 57.895 0.00 0.00 44.05 4.02
485 486 4.821935 GGGTTCAAGTCCCAGGTG 57.178 61.111 0.00 0.00 44.05 4.00
490 491 2.439245 GGGGTGGGTTCAAGTCCC 59.561 66.667 0.00 0.00 44.81 4.46
491 492 1.228459 GTGGGGTGGGTTCAAGTCC 60.228 63.158 0.00 0.00 0.00 3.85
492 493 1.228459 GGTGGGGTGGGTTCAAGTC 60.228 63.158 0.00 0.00 0.00 3.01
493 494 1.368268 ATGGTGGGGTGGGTTCAAGT 61.368 55.000 0.00 0.00 0.00 3.16
494 495 0.701731 TATGGTGGGGTGGGTTCAAG 59.298 55.000 0.00 0.00 0.00 3.02
495 496 0.406361 GTATGGTGGGGTGGGTTCAA 59.594 55.000 0.00 0.00 0.00 2.69
496 497 0.476808 AGTATGGTGGGGTGGGTTCA 60.477 55.000 0.00 0.00 0.00 3.18
497 498 0.702316 AAGTATGGTGGGGTGGGTTC 59.298 55.000 0.00 0.00 0.00 3.62
498 499 1.163408 AAAGTATGGTGGGGTGGGTT 58.837 50.000 0.00 0.00 0.00 4.11
499 500 1.163408 AAAAGTATGGTGGGGTGGGT 58.837 50.000 0.00 0.00 0.00 4.51
500 501 1.203125 ACAAAAGTATGGTGGGGTGGG 60.203 52.381 0.00 0.00 0.00 4.61
501 502 2.302587 ACAAAAGTATGGTGGGGTGG 57.697 50.000 0.00 0.00 0.00 4.61
502 503 3.895041 AGAAACAAAAGTATGGTGGGGTG 59.105 43.478 0.00 0.00 0.00 4.61
503 504 4.149598 GAGAAACAAAAGTATGGTGGGGT 58.850 43.478 0.00 0.00 0.00 4.95
504 505 3.509967 GGAGAAACAAAAGTATGGTGGGG 59.490 47.826 0.00 0.00 0.00 4.96
505 506 4.148838 TGGAGAAACAAAAGTATGGTGGG 58.851 43.478 0.00 0.00 0.00 4.61
506 507 5.782893 TTGGAGAAACAAAAGTATGGTGG 57.217 39.130 0.00 0.00 0.00 4.61
507 508 7.925483 TCAATTTGGAGAAACAAAAGTATGGTG 59.075 33.333 0.00 0.00 42.91 4.17
508 509 8.017418 TCAATTTGGAGAAACAAAAGTATGGT 57.983 30.769 0.00 0.00 42.91 3.55
509 510 8.359642 TCTCAATTTGGAGAAACAAAAGTATGG 58.640 33.333 0.00 0.00 42.91 2.74
510 511 9.185192 GTCTCAATTTGGAGAAACAAAAGTATG 57.815 33.333 0.00 0.00 44.98 2.39
511 512 8.076178 CGTCTCAATTTGGAGAAACAAAAGTAT 58.924 33.333 0.00 0.00 44.98 2.12
512 513 7.414436 CGTCTCAATTTGGAGAAACAAAAGTA 58.586 34.615 0.00 0.00 44.98 2.24
513 514 6.265577 CGTCTCAATTTGGAGAAACAAAAGT 58.734 36.000 0.00 0.00 44.98 2.66
514 515 5.687285 CCGTCTCAATTTGGAGAAACAAAAG 59.313 40.000 0.00 0.00 44.98 2.27
515 516 5.587289 CCGTCTCAATTTGGAGAAACAAAA 58.413 37.500 0.00 0.00 44.98 2.44
516 517 4.499019 GCCGTCTCAATTTGGAGAAACAAA 60.499 41.667 0.00 0.00 44.98 2.83
517 518 3.004315 GCCGTCTCAATTTGGAGAAACAA 59.996 43.478 0.00 0.00 44.98 2.83
518 519 2.552315 GCCGTCTCAATTTGGAGAAACA 59.448 45.455 0.00 0.00 44.98 2.83
523 524 1.659098 GTACGCCGTCTCAATTTGGAG 59.341 52.381 0.00 0.00 36.21 3.86
588 589 1.490490 AGGATGGGCGAGCTCAAAATA 59.510 47.619 15.40 0.00 0.00 1.40
693 694 8.817100 CAAAAAGTAAACAGAAAACTGAATCCC 58.183 33.333 0.00 0.00 0.00 3.85
780 781 3.949754 TGGAGCTGCTTAAAAGGATGATG 59.050 43.478 6.82 0.00 0.00 3.07
798 799 2.704464 TGATGAGACAATGCCTGGAG 57.296 50.000 0.00 0.00 0.00 3.86
800 801 4.730949 AAATTGATGAGACAATGCCTGG 57.269 40.909 0.00 0.00 39.88 4.45
802 803 5.163622 CGGTAAAATTGATGAGACAATGCCT 60.164 40.000 0.00 0.00 39.88 4.75
831 832 4.142403 CCGCACAAATCTATGGTGTTCAAT 60.142 41.667 0.00 0.00 35.05 2.57
832 833 3.190327 CCGCACAAATCTATGGTGTTCAA 59.810 43.478 0.00 0.00 35.05 2.69
933 934 3.119137 GGTGTTTATGCAAGGGGTCAATC 60.119 47.826 0.00 0.00 0.00 2.67
980 983 1.639298 GAACCGATGCGCTCTGCTTT 61.639 55.000 9.73 0.00 46.63 3.51
1296 1300 3.536956 AGGTTCAGAAACTTCGTGTCA 57.463 42.857 0.00 0.00 35.61 3.58
1297 1301 4.877323 AAAGGTTCAGAAACTTCGTGTC 57.123 40.909 14.07 0.00 35.61 3.67
1298 1302 6.238648 CCAATAAAGGTTCAGAAACTTCGTGT 60.239 38.462 14.07 1.13 35.61 4.49
1299 1303 6.142817 CCAATAAAGGTTCAGAAACTTCGTG 58.857 40.000 14.07 11.52 35.61 4.35
1300 1304 5.826208 ACCAATAAAGGTTCAGAAACTTCGT 59.174 36.000 14.07 2.22 39.34 3.85
1301 1305 6.313744 ACCAATAAAGGTTCAGAAACTTCG 57.686 37.500 14.07 3.73 39.34 3.79
1328 1341 1.832167 GCCACCAGAACCCTGCAAA 60.832 57.895 0.00 0.00 39.07 3.68
1367 1380 2.430244 CCGTCCAGTCCACGAACG 60.430 66.667 0.00 0.00 39.75 3.95
1395 1408 0.968901 TCGCCTCTCCGTACATTGGT 60.969 55.000 0.00 0.00 0.00 3.67
1477 1490 0.961019 ATCATCTCTCAGGCTCTCGC 59.039 55.000 0.00 0.00 0.00 5.03
1479 1492 3.384146 TGTTGATCATCTCTCAGGCTCTC 59.616 47.826 0.00 0.00 0.00 3.20
1480 1493 3.372897 TGTTGATCATCTCTCAGGCTCT 58.627 45.455 0.00 0.00 0.00 4.09
1560 1573 2.745884 CCCGCACGCTGAAATCCA 60.746 61.111 0.00 0.00 0.00 3.41
1660 1673 4.530857 CGTCACATCCCTCGCCCC 62.531 72.222 0.00 0.00 0.00 5.80
1720 1733 1.304713 AACGGGGAGCCTCGACTAA 60.305 57.895 16.85 0.00 0.00 2.24
1732 1745 2.932905 CGACGAAACACAACGGGG 59.067 61.111 0.00 0.00 0.00 5.73
1777 1790 1.659794 GTCAATGTGTGGCGCCTTT 59.340 52.632 29.70 10.47 0.00 3.11
1851 1864 9.244799 CAAATTCAAAACTTTACCACTACTTCC 57.755 33.333 0.00 0.00 0.00 3.46
1894 1907 1.958579 TGTGTGTCAGCTACCTACGTT 59.041 47.619 0.00 0.00 0.00 3.99
2026 2040 1.974265 TTGTCCCACGCTCAATCAAA 58.026 45.000 0.00 0.00 0.00 2.69
2035 2049 0.317854 GAGCAGTTTTTGTCCCACGC 60.318 55.000 0.00 0.00 0.00 5.34
2036 2050 0.041312 CGAGCAGTTTTTGTCCCACG 60.041 55.000 0.00 0.00 0.00 4.94
2037 2051 0.317854 GCGAGCAGTTTTTGTCCCAC 60.318 55.000 0.00 0.00 0.00 4.61
2039 2053 1.197036 GTAGCGAGCAGTTTTTGTCCC 59.803 52.381 0.00 0.00 0.00 4.46
2040 2054 1.197036 GGTAGCGAGCAGTTTTTGTCC 59.803 52.381 0.00 0.00 0.00 4.02
2041 2055 1.871039 TGGTAGCGAGCAGTTTTTGTC 59.129 47.619 0.00 0.00 0.00 3.18
2042 2056 1.873591 CTGGTAGCGAGCAGTTTTTGT 59.126 47.619 16.77 0.00 44.61 2.83
2043 2057 2.601481 CTGGTAGCGAGCAGTTTTTG 57.399 50.000 16.77 0.00 44.61 2.44
2060 2109 8.021973 CCAACGCTACTAGTATCCTAAATACTG 58.978 40.741 2.33 2.09 36.38 2.74
2089 2138 7.424001 ACGAAATAGTAGTAGCTTGTCCATAC 58.576 38.462 0.00 0.00 0.00 2.39
2093 2142 7.479150 ACTAACGAAATAGTAGTAGCTTGTCC 58.521 38.462 0.00 0.00 34.40 4.02
2169 2218 2.094675 ACCCGCGCTACTACTAAGAAA 58.905 47.619 5.56 0.00 0.00 2.52
2170 2219 1.755179 ACCCGCGCTACTACTAAGAA 58.245 50.000 5.56 0.00 0.00 2.52
2171 2220 1.755179 AACCCGCGCTACTACTAAGA 58.245 50.000 5.56 0.00 0.00 2.10
2172 2221 2.573941 AAACCCGCGCTACTACTAAG 57.426 50.000 5.56 0.00 0.00 2.18
2223 2275 1.202734 ACCCGCGCTACTAGTATCTCA 60.203 52.381 5.56 0.00 0.00 3.27
2225 2277 2.421619 GTACCCGCGCTACTAGTATCT 58.578 52.381 5.56 0.00 0.00 1.98
2272 2324 2.618053 GAAAAAGGCTACTAGCAGCGA 58.382 47.619 8.87 0.00 44.75 4.93
2302 2354 2.141122 AACAATTTGACGCGCCTGGG 62.141 55.000 5.73 0.00 0.00 4.45
2303 2355 0.318614 AAACAATTTGACGCGCCTGG 60.319 50.000 5.73 0.00 0.00 4.45
2304 2356 1.486439 AAAACAATTTGACGCGCCTG 58.514 45.000 5.73 0.00 0.00 4.85
2305 2357 2.217429 AAAAACAATTTGACGCGCCT 57.783 40.000 5.73 0.00 0.00 5.52
2324 2376 5.341617 ACTCGCCAAACGTTTCATTTTTAA 58.658 33.333 11.37 0.00 44.19 1.52
2325 2377 4.922719 ACTCGCCAAACGTTTCATTTTTA 58.077 34.783 11.37 0.00 44.19 1.52
2332 2384 2.182904 ACAAACTCGCCAAACGTTTC 57.817 45.000 11.37 0.00 44.19 2.78
2337 2389 5.543716 GTGTTTTAAACAAACTCGCCAAAC 58.456 37.500 12.37 0.00 44.16 2.93
2340 2392 3.427243 CGTGTTTTAAACAAACTCGCCA 58.573 40.909 12.37 0.00 44.16 5.69
2347 2399 8.649973 ATGAATTTAGCCGTGTTTTAAACAAA 57.350 26.923 12.37 2.68 44.16 2.83
2350 2402 6.864165 TGGATGAATTTAGCCGTGTTTTAAAC 59.136 34.615 0.20 0.20 0.00 2.01
2351 2403 6.982852 TGGATGAATTTAGCCGTGTTTTAAA 58.017 32.000 0.00 0.00 0.00 1.52
2352 2404 6.576662 TGGATGAATTTAGCCGTGTTTTAA 57.423 33.333 0.00 0.00 0.00 1.52
2354 2406 5.461032 TTGGATGAATTTAGCCGTGTTTT 57.539 34.783 0.00 0.00 0.00 2.43
2361 2413 4.672409 CCGAAGTTTGGATGAATTTAGCC 58.328 43.478 2.54 0.00 0.00 3.93
2372 2424 0.105224 TGAACTCGCCGAAGTTTGGA 59.895 50.000 13.84 0.00 39.55 3.53
2428 2480 3.426309 TACGGCGGGCCTAGTAGCT 62.426 63.158 13.24 0.00 0.00 3.32
2471 2524 1.630369 ACATGTAGAGCTTCAAGGGCA 59.370 47.619 0.00 0.00 0.00 5.36
2491 2544 0.240145 CAGTTCTACAGCCACGTCGA 59.760 55.000 0.00 0.00 0.00 4.20
2493 2546 1.344942 CGCAGTTCTACAGCCACGTC 61.345 60.000 0.00 0.00 0.00 4.34
2495 2548 1.372997 ACGCAGTTCTACAGCCACG 60.373 57.895 0.00 0.00 37.78 4.94
2497 2550 0.963225 TACACGCAGTTCTACAGCCA 59.037 50.000 0.00 0.00 41.61 4.75
2499 2552 2.251893 GACTACACGCAGTTCTACAGC 58.748 52.381 0.00 0.00 41.61 4.40
2550 2612 2.368011 GGAGGGGTGCAGTAGGGAC 61.368 68.421 0.00 0.00 37.06 4.46
2617 2688 2.660206 CGTGGTGATCCCCGACAA 59.340 61.111 0.00 0.00 0.00 3.18
2688 2759 4.148825 GAGATGGTCCGGCAGCGT 62.149 66.667 0.00 0.00 0.00 5.07
2693 2764 2.202756 GTGACGAGATGGTCCGGC 60.203 66.667 0.00 0.00 36.07 6.13
2733 2804 1.610554 CCGACGAGGAGGCCCTAAAA 61.611 60.000 0.00 0.00 44.53 1.52
2747 2818 4.856607 GGCGAGGCTTCTCCGACG 62.857 72.222 0.00 0.00 40.77 5.12


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.