Multiple sequence alignment - TraesCS7B01G425100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G425100 chr7B 100.000 2467 0 0 1 2467 693822547 693820081 0.000000e+00 4556.0
1 TraesCS7B01G425100 chr7B 82.010 1801 154 94 469 2170 694799394 694797665 0.000000e+00 1375.0
2 TraesCS7B01G425100 chr7B 83.717 1173 116 44 938 2061 696595353 696594207 0.000000e+00 1038.0
3 TraesCS7B01G425100 chr7B 90.363 633 41 3 1836 2467 694793405 694792792 0.000000e+00 813.0
4 TraesCS7B01G425100 chr7B 83.518 631 55 27 1544 2152 693199947 693199344 6.000000e-151 544.0
5 TraesCS7B01G425100 chr7B 87.364 459 51 7 1134 1591 696382871 696382419 1.010000e-143 520.0
6 TraesCS7B01G425100 chr7B 81.786 280 21 16 630 901 696595696 696595439 8.940000e-50 207.0
7 TraesCS7B01G425100 chr7B 92.958 142 8 2 2075 2216 696593800 696593661 3.220000e-49 206.0
8 TraesCS7B01G425100 chr7B 79.681 251 30 9 2212 2459 694795980 694795748 7.060000e-36 161.0
9 TraesCS7B01G425100 chr7B 90.164 61 4 2 1754 1813 696362441 696362382 7.310000e-11 78.7
10 TraesCS7B01G425100 chr7B 75.130 193 17 17 469 656 693793536 693793370 7.370000e-06 62.1
11 TraesCS7B01G425100 chr7B 100.000 32 0 0 625 656 694767202 694767171 2.650000e-05 60.2
12 TraesCS7B01G425100 chr7B 100.000 32 0 0 625 656 698858135 698858104 2.650000e-05 60.2
13 TraesCS7B01G425100 chr7A 84.891 1145 102 30 1107 2211 699766455 699765342 0.000000e+00 1090.0
14 TraesCS7B01G425100 chr7A 86.301 73 3 5 469 541 699741440 699741375 3.400000e-09 73.1
15 TraesCS7B01G425100 chr7D 82.890 1052 122 36 1126 2152 607562194 607561176 0.000000e+00 893.0
16 TraesCS7B01G425100 chr7D 82.369 1106 92 55 1080 2147 610235639 610236679 0.000000e+00 867.0
17 TraesCS7B01G425100 chr7D 83.306 605 66 20 1107 1705 608488110 608487535 2.170000e-145 525.0
18 TraesCS7B01G425100 chr7D 83.684 570 57 16 1087 1655 608450488 608449954 2.830000e-139 505.0
19 TraesCS7B01G425100 chr7D 88.398 362 32 8 1860 2216 608446140 608445784 6.300000e-116 427.0
20 TraesCS7B01G425100 chr7D 86.545 275 14 15 631 901 607564233 607563978 5.190000e-72 281.0
21 TraesCS7B01G425100 chr7D 85.315 143 2 6 1729 1865 608449927 608449798 1.990000e-26 130.0
22 TraesCS7B01G425100 chr7D 78.107 169 14 10 843 1002 608474835 608474681 4.370000e-13 86.1
23 TraesCS7B01G425100 chr7D 75.132 189 21 15 469 656 610239955 610240118 5.690000e-07 65.8
24 TraesCS7B01G425100 chr7D 100.000 32 0 0 625 656 607547128 607547097 2.650000e-05 60.2
25 TraesCS7B01G425100 chr4A 81.894 961 100 47 941 1841 661969311 661970257 0.000000e+00 743.0
26 TraesCS7B01G425100 chr4A 76.552 145 21 12 625 761 661968550 661968689 1.580000e-07 67.6
27 TraesCS7B01G425100 chrUn 85.145 552 41 23 938 1451 77587034 77586486 6.040000e-146 527.0
28 TraesCS7B01G425100 chrUn 88.127 379 36 5 1080 1458 83371125 83370756 2.250000e-120 442.0
29 TraesCS7B01G425100 chrUn 88.542 192 11 7 715 901 77587314 77587129 3.190000e-54 222.0
30 TraesCS7B01G425100 chrUn 87.805 164 12 4 1548 1705 83370736 83370575 4.190000e-43 185.0
31 TraesCS7B01G425100 chrUn 78.623 276 31 10 1708 1970 83367071 83366811 9.130000e-35 158.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G425100 chr7B 693820081 693822547 2466 True 4556.000000 4556 100.000000 1 2467 1 chr7B.!!$R3 2466
1 TraesCS7B01G425100 chr7B 694792792 694799394 6602 True 783.000000 1375 84.018000 469 2467 3 chr7B.!!$R8 1998
2 TraesCS7B01G425100 chr7B 693199344 693199947 603 True 544.000000 544 83.518000 1544 2152 1 chr7B.!!$R1 608
3 TraesCS7B01G425100 chr7B 696593661 696595696 2035 True 483.666667 1038 86.153667 630 2216 3 chr7B.!!$R9 1586
4 TraesCS7B01G425100 chr7A 699765342 699766455 1113 True 1090.000000 1090 84.891000 1107 2211 1 chr7A.!!$R2 1104
5 TraesCS7B01G425100 chr7D 607561176 607564233 3057 True 587.000000 893 84.717500 631 2152 2 chr7D.!!$R4 1521
6 TraesCS7B01G425100 chr7D 608487535 608488110 575 True 525.000000 525 83.306000 1107 1705 1 chr7D.!!$R3 598
7 TraesCS7B01G425100 chr7D 610235639 610240118 4479 False 466.400000 867 78.750500 469 2147 2 chr7D.!!$F1 1678
8 TraesCS7B01G425100 chr7D 608445784 608450488 4704 True 354.000000 505 85.799000 1087 2216 3 chr7D.!!$R5 1129
9 TraesCS7B01G425100 chr4A 661968550 661970257 1707 False 405.300000 743 79.223000 625 1841 2 chr4A.!!$F1 1216
10 TraesCS7B01G425100 chrUn 77586486 77587314 828 True 374.500000 527 86.843500 715 1451 2 chrUn.!!$R1 736
11 TraesCS7B01G425100 chrUn 83366811 83371125 4314 True 261.666667 442 84.851667 1080 1970 3 chrUn.!!$R2 890

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
450 451 0.025001 CGGCGCTGACAATACGAAAG 59.975 55.0 11.9 0.0 0.0 2.62 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1924 11330 0.454196 GTGTGTGTGGTTGGTTGGAC 59.546 55.0 0.0 0.0 0.0 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.992636 GCTGAGCTTGAGACATTGC 57.007 52.632 0.00 0.00 0.00 3.56
19 20 1.451067 GCTGAGCTTGAGACATTGCT 58.549 50.000 0.00 0.00 38.59 3.91
22 23 2.105006 GAGCTTGAGACATTGCTCCA 57.895 50.000 12.55 0.00 44.16 3.86
23 24 1.736681 GAGCTTGAGACATTGCTCCAC 59.263 52.381 12.55 0.00 44.16 4.02
24 25 0.807496 GCTTGAGACATTGCTCCACC 59.193 55.000 0.00 0.00 33.95 4.61
25 26 1.612726 GCTTGAGACATTGCTCCACCT 60.613 52.381 0.00 0.00 33.95 4.00
26 27 2.787994 CTTGAGACATTGCTCCACCTT 58.212 47.619 0.00 0.00 33.95 3.50
27 28 2.957402 TGAGACATTGCTCCACCTTT 57.043 45.000 0.00 0.00 33.95 3.11
28 29 2.507484 TGAGACATTGCTCCACCTTTG 58.493 47.619 0.00 0.00 33.95 2.77
29 30 1.200948 GAGACATTGCTCCACCTTTGC 59.799 52.381 0.00 0.00 0.00 3.68
30 31 0.244721 GACATTGCTCCACCTTTGCC 59.755 55.000 0.00 0.00 0.00 4.52
31 32 1.213537 CATTGCTCCACCTTTGCCG 59.786 57.895 0.00 0.00 0.00 5.69
32 33 2.639327 ATTGCTCCACCTTTGCCGC 61.639 57.895 0.00 0.00 0.00 6.53
33 34 4.577677 TGCTCCACCTTTGCCGCA 62.578 61.111 0.00 0.00 0.00 5.69
34 35 4.043200 GCTCCACCTTTGCCGCAC 62.043 66.667 0.00 0.00 0.00 5.34
35 36 2.281761 CTCCACCTTTGCCGCACT 60.282 61.111 0.00 0.00 0.00 4.40
36 37 1.898574 CTCCACCTTTGCCGCACTT 60.899 57.895 0.00 0.00 0.00 3.16
37 38 0.605319 CTCCACCTTTGCCGCACTTA 60.605 55.000 0.00 0.00 0.00 2.24
38 39 0.037590 TCCACCTTTGCCGCACTTAT 59.962 50.000 0.00 0.00 0.00 1.73
39 40 0.451783 CCACCTTTGCCGCACTTATC 59.548 55.000 0.00 0.00 0.00 1.75
40 41 1.164411 CACCTTTGCCGCACTTATCA 58.836 50.000 0.00 0.00 0.00 2.15
41 42 1.131126 CACCTTTGCCGCACTTATCAG 59.869 52.381 0.00 0.00 0.00 2.90
42 43 1.003118 ACCTTTGCCGCACTTATCAGA 59.997 47.619 0.00 0.00 0.00 3.27
43 44 2.292267 CCTTTGCCGCACTTATCAGAT 58.708 47.619 0.00 0.00 0.00 2.90
44 45 2.289002 CCTTTGCCGCACTTATCAGATC 59.711 50.000 0.00 0.00 0.00 2.75
45 46 2.689553 TTGCCGCACTTATCAGATCA 57.310 45.000 0.00 0.00 0.00 2.92
46 47 2.229675 TGCCGCACTTATCAGATCAG 57.770 50.000 0.00 0.00 0.00 2.90
47 48 1.756538 TGCCGCACTTATCAGATCAGA 59.243 47.619 0.00 0.00 0.00 3.27
48 49 2.366590 TGCCGCACTTATCAGATCAGAT 59.633 45.455 5.86 5.86 0.00 2.90
49 50 2.992543 GCCGCACTTATCAGATCAGATC 59.007 50.000 3.56 1.64 0.00 2.75
50 51 3.240884 CCGCACTTATCAGATCAGATCG 58.759 50.000 3.56 1.95 0.00 3.69
51 52 3.057946 CCGCACTTATCAGATCAGATCGA 60.058 47.826 3.56 6.15 0.00 3.59
52 53 4.540824 CGCACTTATCAGATCAGATCGAA 58.459 43.478 3.56 0.00 0.00 3.71
53 54 5.159925 CGCACTTATCAGATCAGATCGAAT 58.840 41.667 3.56 5.47 0.00 3.34
54 55 5.060693 CGCACTTATCAGATCAGATCGAATG 59.939 44.000 3.56 0.00 0.00 2.67
55 56 5.348179 GCACTTATCAGATCAGATCGAATGG 59.652 44.000 3.56 3.97 0.00 3.16
56 57 5.868258 CACTTATCAGATCAGATCGAATGGG 59.132 44.000 3.56 3.69 0.00 4.00
57 58 2.827800 TCAGATCAGATCGAATGGGC 57.172 50.000 4.67 0.00 0.00 5.36
58 59 2.041701 TCAGATCAGATCGAATGGGCA 58.958 47.619 4.67 0.00 0.00 5.36
59 60 2.141517 CAGATCAGATCGAATGGGCAC 58.858 52.381 4.67 0.00 0.00 5.01
60 61 1.764723 AGATCAGATCGAATGGGCACA 59.235 47.619 4.67 0.00 0.00 4.57
61 62 2.141517 GATCAGATCGAATGGGCACAG 58.858 52.381 0.00 0.00 0.00 3.66
62 63 0.462581 TCAGATCGAATGGGCACAGC 60.463 55.000 0.00 0.00 0.00 4.40
63 64 0.745486 CAGATCGAATGGGCACAGCA 60.745 55.000 0.00 0.00 0.00 4.41
64 65 0.745845 AGATCGAATGGGCACAGCAC 60.746 55.000 0.00 0.00 0.00 4.40
65 66 0.745845 GATCGAATGGGCACAGCACT 60.746 55.000 0.00 0.00 30.56 4.40
66 67 0.541392 ATCGAATGGGCACAGCACTA 59.459 50.000 0.00 0.00 30.56 2.74
67 68 0.541392 TCGAATGGGCACAGCACTAT 59.459 50.000 0.00 0.00 30.56 2.12
68 69 0.940126 CGAATGGGCACAGCACTATC 59.060 55.000 0.00 0.00 30.56 2.08
69 70 0.940126 GAATGGGCACAGCACTATCG 59.060 55.000 0.00 0.00 30.56 2.92
70 71 1.097547 AATGGGCACAGCACTATCGC 61.098 55.000 0.00 0.00 30.56 4.58
71 72 2.897350 GGGCACAGCACTATCGCC 60.897 66.667 0.00 0.00 42.21 5.54
72 73 3.264897 GGCACAGCACTATCGCCG 61.265 66.667 0.00 0.00 32.14 6.46
73 74 3.929948 GCACAGCACTATCGCCGC 61.930 66.667 0.00 0.00 0.00 6.53
74 75 3.620428 CACAGCACTATCGCCGCG 61.620 66.667 6.39 6.39 0.00 6.46
77 78 4.514577 AGCACTATCGCCGCGCTT 62.515 61.111 8.21 0.19 0.00 4.68
78 79 2.657296 GCACTATCGCCGCGCTTA 60.657 61.111 8.21 1.50 0.00 3.09
79 80 2.022129 GCACTATCGCCGCGCTTAT 61.022 57.895 8.21 0.00 0.00 1.73
80 81 1.945776 GCACTATCGCCGCGCTTATC 61.946 60.000 8.21 0.00 0.00 1.75
81 82 0.663269 CACTATCGCCGCGCTTATCA 60.663 55.000 8.21 0.00 0.00 2.15
82 83 0.387367 ACTATCGCCGCGCTTATCAG 60.387 55.000 8.21 0.00 0.00 2.90
83 84 0.109735 CTATCGCCGCGCTTATCAGA 60.110 55.000 8.21 0.00 0.00 3.27
84 85 0.526211 TATCGCCGCGCTTATCAGAT 59.474 50.000 8.21 4.49 0.00 2.90
85 86 0.734253 ATCGCCGCGCTTATCAGATC 60.734 55.000 8.21 0.00 0.00 2.75
86 87 1.661509 CGCCGCGCTTATCAGATCA 60.662 57.895 5.56 0.00 0.00 2.92
87 88 1.010935 CGCCGCGCTTATCAGATCAT 61.011 55.000 5.56 0.00 0.00 2.45
88 89 1.732405 CGCCGCGCTTATCAGATCATA 60.732 52.381 5.56 0.00 0.00 2.15
89 90 2.544685 GCCGCGCTTATCAGATCATAT 58.455 47.619 5.56 0.00 0.00 1.78
90 91 2.537625 GCCGCGCTTATCAGATCATATC 59.462 50.000 5.56 0.00 0.00 1.63
91 92 2.786027 CCGCGCTTATCAGATCATATCG 59.214 50.000 5.56 0.00 0.00 2.92
92 93 3.487544 CCGCGCTTATCAGATCATATCGA 60.488 47.826 5.56 0.00 0.00 3.59
93 94 4.098416 CGCGCTTATCAGATCATATCGAA 58.902 43.478 5.56 0.00 0.00 3.71
94 95 4.558860 CGCGCTTATCAGATCATATCGAAA 59.441 41.667 5.56 0.00 0.00 3.46
95 96 5.230936 CGCGCTTATCAGATCATATCGAAAT 59.769 40.000 5.56 0.00 0.00 2.17
96 97 6.409232 GCGCTTATCAGATCATATCGAAATG 58.591 40.000 0.00 0.00 0.00 2.32
97 98 6.254373 GCGCTTATCAGATCATATCGAAATGA 59.746 38.462 0.00 0.00 40.07 2.57
98 99 7.201470 GCGCTTATCAGATCATATCGAAATGAA 60.201 37.037 0.00 0.00 39.25 2.57
99 100 8.815189 CGCTTATCAGATCATATCGAAATGAAT 58.185 33.333 0.00 0.00 39.25 2.57
100 101 9.917872 GCTTATCAGATCATATCGAAATGAATG 57.082 33.333 0.00 0.00 39.25 2.67
104 105 8.488651 TCAGATCATATCGAAATGAATGGATG 57.511 34.615 0.00 0.00 39.25 3.51
105 106 7.551617 TCAGATCATATCGAAATGAATGGATGG 59.448 37.037 0.00 0.00 39.25 3.51
106 107 5.885230 TCATATCGAAATGAATGGATGGC 57.115 39.130 0.00 0.00 32.97 4.40
107 108 4.392754 TCATATCGAAATGAATGGATGGCG 59.607 41.667 0.00 0.00 32.97 5.69
108 109 0.662619 TCGAAATGAATGGATGGCGC 59.337 50.000 0.00 0.00 0.00 6.53
109 110 0.318107 CGAAATGAATGGATGGCGCC 60.318 55.000 22.73 22.73 0.00 6.53
110 111 0.746063 GAAATGAATGGATGGCGCCA 59.254 50.000 34.80 34.80 43.23 5.69
111 112 0.461135 AAATGAATGGATGGCGCCAC 59.539 50.000 35.50 24.69 41.56 5.01
112 113 1.394266 AATGAATGGATGGCGCCACC 61.394 55.000 35.50 32.00 41.56 4.61
113 114 2.124151 GAATGGATGGCGCCACCT 60.124 61.111 35.50 18.87 41.56 4.00
114 115 2.124151 AATGGATGGCGCCACCTC 60.124 61.111 35.50 26.51 41.56 3.85
115 116 4.552365 ATGGATGGCGCCACCTCG 62.552 66.667 35.50 0.00 41.56 4.63
117 118 3.845259 GGATGGCGCCACCTCGTA 61.845 66.667 35.50 7.17 40.22 3.43
118 119 2.585247 GATGGCGCCACCTCGTAC 60.585 66.667 35.50 13.17 40.22 3.67
119 120 4.508128 ATGGCGCCACCTCGTACG 62.508 66.667 35.50 9.53 40.22 3.67
121 122 3.814268 GGCGCCACCTCGTACGTA 61.814 66.667 24.80 0.00 34.51 3.57
122 123 2.577911 GCGCCACCTCGTACGTAC 60.578 66.667 15.90 15.90 0.00 3.67
131 132 2.348988 CGTACGTACGTCCGCGAG 60.349 66.667 33.95 9.02 44.13 5.03
132 133 2.645936 GTACGTACGTCCGCGAGC 60.646 66.667 26.53 4.02 42.00 5.03
133 134 2.815211 TACGTACGTCCGCGAGCT 60.815 61.111 26.53 0.00 42.00 4.09
134 135 3.087273 TACGTACGTCCGCGAGCTG 62.087 63.158 26.53 0.00 42.00 4.24
136 137 3.807538 GTACGTCCGCGAGCTGGA 61.808 66.667 8.23 0.00 42.00 3.86
137 138 3.057548 TACGTCCGCGAGCTGGAA 61.058 61.111 8.23 0.00 42.00 3.53
138 139 3.332493 TACGTCCGCGAGCTGGAAC 62.332 63.158 8.23 0.00 42.00 3.62
140 141 4.070552 GTCCGCGAGCTGGAACCT 62.071 66.667 8.23 0.00 37.23 3.50
141 142 2.361992 TCCGCGAGCTGGAACCTA 60.362 61.111 8.23 0.00 30.98 3.08
142 143 2.105128 CCGCGAGCTGGAACCTAG 59.895 66.667 8.23 0.00 0.00 3.02
143 144 2.583593 CGCGAGCTGGAACCTAGC 60.584 66.667 0.00 0.00 41.43 3.42
144 145 2.583593 GCGAGCTGGAACCTAGCG 60.584 66.667 0.00 0.00 45.61 4.26
145 146 2.105128 CGAGCTGGAACCTAGCGG 59.895 66.667 0.00 0.00 45.61 5.52
147 148 1.381928 CGAGCTGGAACCTAGCGGTA 61.382 60.000 0.00 0.00 44.73 4.02
148 149 0.102663 GAGCTGGAACCTAGCGGTAC 59.897 60.000 0.00 0.00 44.73 3.34
149 150 1.143401 GCTGGAACCTAGCGGTACC 59.857 63.158 0.16 0.16 44.73 3.34
150 151 1.821258 CTGGAACCTAGCGGTACCC 59.179 63.158 6.25 0.00 44.73 3.69
151 152 0.686769 CTGGAACCTAGCGGTACCCT 60.687 60.000 6.25 7.22 44.73 4.34
152 153 0.630673 TGGAACCTAGCGGTACCCTA 59.369 55.000 6.25 8.03 44.73 3.53
153 154 1.035923 GGAACCTAGCGGTACCCTAC 58.964 60.000 6.25 0.00 44.73 3.18
154 155 1.410790 GGAACCTAGCGGTACCCTACT 60.411 57.143 6.25 4.10 44.73 2.57
155 156 1.680207 GAACCTAGCGGTACCCTACTG 59.320 57.143 6.25 4.02 44.73 2.74
156 157 0.921896 ACCTAGCGGTACCCTACTGA 59.078 55.000 6.25 0.00 43.29 3.41
157 158 1.498145 ACCTAGCGGTACCCTACTGAT 59.502 52.381 6.25 0.00 43.29 2.90
158 159 1.887198 CCTAGCGGTACCCTACTGATG 59.113 57.143 6.25 0.00 37.22 3.07
159 160 2.488528 CCTAGCGGTACCCTACTGATGA 60.489 54.545 6.25 0.00 37.22 2.92
160 161 2.154567 AGCGGTACCCTACTGATGAA 57.845 50.000 6.25 0.00 37.22 2.57
161 162 2.032620 AGCGGTACCCTACTGATGAAG 58.967 52.381 6.25 0.00 37.22 3.02
162 163 1.755380 GCGGTACCCTACTGATGAAGT 59.245 52.381 6.25 0.00 43.40 3.01
163 164 2.167900 GCGGTACCCTACTGATGAAGTT 59.832 50.000 6.25 0.00 40.56 2.66
164 165 3.782046 CGGTACCCTACTGATGAAGTTG 58.218 50.000 6.25 0.00 40.56 3.16
165 166 3.194968 CGGTACCCTACTGATGAAGTTGT 59.805 47.826 6.25 0.00 40.56 3.32
166 167 4.504858 GGTACCCTACTGATGAAGTTGTG 58.495 47.826 0.00 0.00 40.56 3.33
167 168 4.020485 GGTACCCTACTGATGAAGTTGTGT 60.020 45.833 0.00 0.00 40.56 3.72
168 169 5.186409 GGTACCCTACTGATGAAGTTGTGTA 59.814 44.000 0.00 0.00 40.56 2.90
169 170 5.148651 ACCCTACTGATGAAGTTGTGTAC 57.851 43.478 0.00 0.00 40.56 2.90
170 171 4.838986 ACCCTACTGATGAAGTTGTGTACT 59.161 41.667 0.00 0.00 40.56 2.73
171 172 5.171476 CCCTACTGATGAAGTTGTGTACTG 58.829 45.833 0.00 0.00 40.56 2.74
172 173 5.047306 CCCTACTGATGAAGTTGTGTACTGA 60.047 44.000 0.00 0.00 40.56 3.41
173 174 6.455647 CCTACTGATGAAGTTGTGTACTGAA 58.544 40.000 0.00 0.00 40.56 3.02
174 175 6.366332 CCTACTGATGAAGTTGTGTACTGAAC 59.634 42.308 0.00 0.00 40.56 3.18
175 176 4.745125 ACTGATGAAGTTGTGTACTGAACG 59.255 41.667 0.00 0.00 34.57 3.95
176 177 4.939271 TGATGAAGTTGTGTACTGAACGA 58.061 39.130 0.00 0.00 37.12 3.85
177 178 4.982295 TGATGAAGTTGTGTACTGAACGAG 59.018 41.667 0.00 0.00 37.12 4.18
178 179 4.642445 TGAAGTTGTGTACTGAACGAGA 57.358 40.909 0.00 0.00 37.12 4.04
179 180 5.196341 TGAAGTTGTGTACTGAACGAGAT 57.804 39.130 0.00 0.00 37.12 2.75
180 181 4.982295 TGAAGTTGTGTACTGAACGAGATG 59.018 41.667 0.00 0.00 37.12 2.90
181 182 4.585955 AGTTGTGTACTGAACGAGATGT 57.414 40.909 0.00 0.00 35.19 3.06
182 183 4.299155 AGTTGTGTACTGAACGAGATGTG 58.701 43.478 0.00 0.00 35.19 3.21
183 184 2.672714 TGTGTACTGAACGAGATGTGC 58.327 47.619 0.00 0.00 0.00 4.57
184 185 2.035321 TGTGTACTGAACGAGATGTGCA 59.965 45.455 0.00 0.00 33.97 4.57
185 186 3.254060 GTGTACTGAACGAGATGTGCAT 58.746 45.455 0.00 0.00 34.87 3.96
186 187 3.679980 GTGTACTGAACGAGATGTGCATT 59.320 43.478 0.00 0.00 34.87 3.56
187 188 4.862574 GTGTACTGAACGAGATGTGCATTA 59.137 41.667 0.00 0.00 34.87 1.90
188 189 5.520288 GTGTACTGAACGAGATGTGCATTAT 59.480 40.000 0.00 0.00 34.87 1.28
189 190 6.036083 GTGTACTGAACGAGATGTGCATTATT 59.964 38.462 0.00 0.00 34.87 1.40
190 191 5.475273 ACTGAACGAGATGTGCATTATTG 57.525 39.130 0.00 0.00 34.87 1.90
191 192 4.937620 ACTGAACGAGATGTGCATTATTGT 59.062 37.500 0.00 0.00 34.87 2.71
192 193 5.163824 ACTGAACGAGATGTGCATTATTGTG 60.164 40.000 0.00 0.00 34.87 3.33
193 194 3.680642 ACGAGATGTGCATTATTGTGC 57.319 42.857 0.00 0.00 45.25 4.57
199 200 3.981303 GCATTATTGTGCGCGTGG 58.019 55.556 8.43 0.00 35.10 4.94
200 201 1.427419 GCATTATTGTGCGCGTGGA 59.573 52.632 8.43 0.00 35.10 4.02
201 202 0.179176 GCATTATTGTGCGCGTGGAA 60.179 50.000 8.43 0.00 35.10 3.53
202 203 1.813896 CATTATTGTGCGCGTGGAAG 58.186 50.000 8.43 0.00 0.00 3.46
203 204 1.396648 CATTATTGTGCGCGTGGAAGA 59.603 47.619 8.43 0.00 0.00 2.87
204 205 0.793861 TTATTGTGCGCGTGGAAGAC 59.206 50.000 8.43 0.00 0.00 3.01
225 226 2.673074 ACGTCTCGTGTTGGTGTTG 58.327 52.632 0.00 0.00 39.18 3.33
226 227 0.808453 ACGTCTCGTGTTGGTGTTGG 60.808 55.000 0.00 0.00 39.18 3.77
227 228 0.808453 CGTCTCGTGTTGGTGTTGGT 60.808 55.000 0.00 0.00 0.00 3.67
228 229 0.935196 GTCTCGTGTTGGTGTTGGTC 59.065 55.000 0.00 0.00 0.00 4.02
229 230 0.179067 TCTCGTGTTGGTGTTGGTCC 60.179 55.000 0.00 0.00 0.00 4.46
230 231 0.179056 CTCGTGTTGGTGTTGGTCCT 60.179 55.000 0.00 0.00 0.00 3.85
231 232 0.462937 TCGTGTTGGTGTTGGTCCTG 60.463 55.000 0.00 0.00 0.00 3.86
232 233 1.733526 GTGTTGGTGTTGGTCCTGC 59.266 57.895 0.00 0.00 0.00 4.85
233 234 1.821759 TGTTGGTGTTGGTCCTGCG 60.822 57.895 0.00 0.00 0.00 5.18
234 235 1.822186 GTTGGTGTTGGTCCTGCGT 60.822 57.895 0.00 0.00 0.00 5.24
235 236 1.821759 TTGGTGTTGGTCCTGCGTG 60.822 57.895 0.00 0.00 0.00 5.34
236 237 3.660111 GGTGTTGGTCCTGCGTGC 61.660 66.667 0.00 0.00 0.00 5.34
237 238 2.899838 GTGTTGGTCCTGCGTGCA 60.900 61.111 0.00 0.00 0.00 4.57
238 239 2.591429 TGTTGGTCCTGCGTGCAG 60.591 61.111 14.82 14.82 43.26 4.41
269 270 2.286121 CAGGGCAGGGGAAGGGTA 60.286 66.667 0.00 0.00 0.00 3.69
270 271 1.928567 CAGGGCAGGGGAAGGGTAA 60.929 63.158 0.00 0.00 0.00 2.85
271 272 1.929088 AGGGCAGGGGAAGGGTAAC 60.929 63.158 0.00 0.00 0.00 2.50
287 288 3.501950 GGTAACCAAACCTACGTAGACG 58.498 50.000 24.15 10.55 39.83 4.18
288 289 2.730550 AACCAAACCTACGTAGACGG 57.269 50.000 24.15 18.24 44.95 4.79
289 290 1.909700 ACCAAACCTACGTAGACGGA 58.090 50.000 24.15 0.00 44.95 4.69
295 296 2.023318 CTACGTAGACGGAGGCAGG 58.977 63.158 17.95 0.00 46.14 4.85
296 297 0.463295 CTACGTAGACGGAGGCAGGA 60.463 60.000 17.95 0.00 46.14 3.86
297 298 0.182061 TACGTAGACGGAGGCAGGAT 59.818 55.000 7.04 0.00 44.95 3.24
298 299 1.360551 CGTAGACGGAGGCAGGATG 59.639 63.158 0.00 0.00 35.56 3.51
299 300 1.742768 GTAGACGGAGGCAGGATGG 59.257 63.158 0.00 0.00 35.86 3.51
300 301 1.043673 GTAGACGGAGGCAGGATGGT 61.044 60.000 0.00 0.00 35.86 3.55
301 302 0.325296 TAGACGGAGGCAGGATGGTT 60.325 55.000 0.00 0.00 35.86 3.67
302 303 1.201429 AGACGGAGGCAGGATGGTTT 61.201 55.000 0.00 0.00 35.86 3.27
303 304 0.322546 GACGGAGGCAGGATGGTTTT 60.323 55.000 0.00 0.00 35.86 2.43
304 305 0.112412 ACGGAGGCAGGATGGTTTTT 59.888 50.000 0.00 0.00 35.86 1.94
318 319 4.155950 TTTTTGCTGCTCAGGCGA 57.844 50.000 0.00 0.00 42.25 5.54
319 320 1.951510 TTTTTGCTGCTCAGGCGAG 59.048 52.632 0.00 2.61 42.25 5.03
336 337 3.345808 GCTGCGTGCTTTGACCGA 61.346 61.111 0.00 0.00 38.95 4.69
337 338 2.856032 CTGCGTGCTTTGACCGAG 59.144 61.111 0.00 0.00 0.00 4.63
338 339 3.300667 CTGCGTGCTTTGACCGAGC 62.301 63.158 0.00 0.00 40.53 5.03
342 343 4.681421 TGCTTTGACCGAGCAGAG 57.319 55.556 0.00 0.00 44.63 3.35
343 344 1.669115 TGCTTTGACCGAGCAGAGC 60.669 57.895 11.34 11.34 44.63 4.09
344 345 2.734673 GCTTTGACCGAGCAGAGCG 61.735 63.158 4.72 0.00 36.47 5.03
345 346 1.373497 CTTTGACCGAGCAGAGCGT 60.373 57.895 0.00 0.00 0.00 5.07
346 347 0.946221 CTTTGACCGAGCAGAGCGTT 60.946 55.000 0.00 0.00 0.00 4.84
347 348 0.944311 TTTGACCGAGCAGAGCGTTC 60.944 55.000 0.00 0.00 0.00 3.95
348 349 2.082629 TTGACCGAGCAGAGCGTTCA 62.083 55.000 1.01 0.00 0.00 3.18
349 350 2.049063 ACCGAGCAGAGCGTTCAC 60.049 61.111 1.01 0.00 0.00 3.18
350 351 2.259818 CCGAGCAGAGCGTTCACT 59.740 61.111 1.01 0.00 0.00 3.41
351 352 1.803519 CCGAGCAGAGCGTTCACTC 60.804 63.158 10.88 10.88 36.91 3.51
352 353 2.148982 CGAGCAGAGCGTTCACTCG 61.149 63.158 22.89 22.89 42.12 4.18
353 354 1.210413 GAGCAGAGCGTTCACTCGA 59.790 57.895 1.01 0.00 41.77 4.04
354 355 0.796491 GAGCAGAGCGTTCACTCGAG 60.796 60.000 11.84 11.84 41.77 4.04
355 356 2.440569 GCAGAGCGTTCACTCGAGC 61.441 63.158 13.61 0.00 41.77 5.03
356 357 1.081175 CAGAGCGTTCACTCGAGCA 60.081 57.895 13.61 0.00 41.77 4.26
357 358 0.664466 CAGAGCGTTCACTCGAGCAA 60.664 55.000 13.61 2.40 41.77 3.91
358 359 0.032130 AGAGCGTTCACTCGAGCAAA 59.968 50.000 13.61 3.96 41.77 3.68
359 360 0.436531 GAGCGTTCACTCGAGCAAAG 59.563 55.000 13.61 9.17 0.00 2.77
360 361 0.249489 AGCGTTCACTCGAGCAAAGT 60.249 50.000 13.61 0.00 0.00 2.66
361 362 0.161870 GCGTTCACTCGAGCAAAGTC 59.838 55.000 13.61 1.62 0.00 3.01
362 363 1.487482 CGTTCACTCGAGCAAAGTCA 58.513 50.000 13.61 0.00 0.00 3.41
363 364 1.190323 CGTTCACTCGAGCAAAGTCAC 59.810 52.381 13.61 0.00 0.00 3.67
364 365 1.527311 GTTCACTCGAGCAAAGTCACC 59.473 52.381 13.61 0.00 0.00 4.02
365 366 1.040646 TCACTCGAGCAAAGTCACCT 58.959 50.000 13.61 0.00 0.00 4.00
366 367 1.000163 TCACTCGAGCAAAGTCACCTC 60.000 52.381 13.61 0.00 0.00 3.85
368 369 1.347817 CTCGAGCAAAGTCACCTCGC 61.348 60.000 0.00 0.00 45.78 5.03
369 370 2.383527 CGAGCAAAGTCACCTCGCC 61.384 63.158 0.00 0.00 41.41 5.54
370 371 2.357517 AGCAAAGTCACCTCGCCG 60.358 61.111 0.00 0.00 0.00 6.46
371 372 2.665185 GCAAAGTCACCTCGCCGT 60.665 61.111 0.00 0.00 0.00 5.68
372 373 2.668280 GCAAAGTCACCTCGCCGTC 61.668 63.158 0.00 0.00 0.00 4.79
373 374 2.049433 AAAGTCACCTCGCCGTCG 60.049 61.111 0.00 0.00 0.00 5.12
374 375 2.558286 AAAGTCACCTCGCCGTCGA 61.558 57.895 0.00 0.00 43.28 4.20
386 387 4.164252 CGTCGAGGGAACGGAAAG 57.836 61.111 0.00 0.00 0.00 2.62
387 388 1.288127 CGTCGAGGGAACGGAAAGT 59.712 57.895 0.00 0.00 0.00 2.66
388 389 0.523072 CGTCGAGGGAACGGAAAGTA 59.477 55.000 0.00 0.00 0.00 2.24
389 390 1.467035 CGTCGAGGGAACGGAAAGTAG 60.467 57.143 0.00 0.00 0.00 2.57
390 391 1.815003 GTCGAGGGAACGGAAAGTAGA 59.185 52.381 0.00 0.00 0.00 2.59
391 392 1.815003 TCGAGGGAACGGAAAGTAGAC 59.185 52.381 0.00 0.00 0.00 2.59
392 393 1.542915 CGAGGGAACGGAAAGTAGACA 59.457 52.381 0.00 0.00 0.00 3.41
393 394 2.029649 CGAGGGAACGGAAAGTAGACAA 60.030 50.000 0.00 0.00 0.00 3.18
394 395 3.553508 CGAGGGAACGGAAAGTAGACAAA 60.554 47.826 0.00 0.00 0.00 2.83
395 396 3.736720 AGGGAACGGAAAGTAGACAAAC 58.263 45.455 0.00 0.00 0.00 2.93
396 397 2.477754 GGGAACGGAAAGTAGACAAACG 59.522 50.000 0.00 0.00 0.00 3.60
397 398 3.126073 GGAACGGAAAGTAGACAAACGT 58.874 45.455 0.00 0.00 34.25 3.99
398 399 3.060070 GGAACGGAAAGTAGACAAACGTG 60.060 47.826 0.00 0.00 33.03 4.49
399 400 2.476821 ACGGAAAGTAGACAAACGTGG 58.523 47.619 0.00 0.00 0.00 4.94
400 401 2.101249 ACGGAAAGTAGACAAACGTGGA 59.899 45.455 0.00 0.00 0.00 4.02
401 402 3.243975 ACGGAAAGTAGACAAACGTGGAT 60.244 43.478 0.00 0.00 0.00 3.41
402 403 3.367025 CGGAAAGTAGACAAACGTGGATC 59.633 47.826 0.00 0.00 0.00 3.36
403 404 3.683340 GGAAAGTAGACAAACGTGGATCC 59.317 47.826 4.20 4.20 0.00 3.36
404 405 4.562963 GGAAAGTAGACAAACGTGGATCCT 60.563 45.833 14.23 0.00 0.00 3.24
405 406 3.870633 AGTAGACAAACGTGGATCCTC 57.129 47.619 14.23 8.71 0.00 3.71
406 407 2.163815 AGTAGACAAACGTGGATCCTCG 59.836 50.000 29.49 29.49 38.64 4.63
407 408 0.389948 AGACAAACGTGGATCCTCGC 60.390 55.000 30.66 16.88 36.55 5.03
408 409 0.669318 GACAAACGTGGATCCTCGCA 60.669 55.000 30.66 0.25 36.55 5.10
409 410 0.036388 ACAAACGTGGATCCTCGCAT 60.036 50.000 30.66 19.60 36.55 4.73
410 411 0.652592 CAAACGTGGATCCTCGCATC 59.347 55.000 30.66 6.80 36.55 3.91
411 412 0.806102 AAACGTGGATCCTCGCATCG 60.806 55.000 30.66 18.07 36.55 3.84
412 413 1.663379 AACGTGGATCCTCGCATCGA 61.663 55.000 30.66 0.00 36.55 3.59
413 414 1.287191 CGTGGATCCTCGCATCGAT 59.713 57.895 22.01 0.00 34.61 3.59
414 415 0.730834 CGTGGATCCTCGCATCGATC 60.731 60.000 22.01 0.00 34.61 3.69
415 416 0.315251 GTGGATCCTCGCATCGATCA 59.685 55.000 14.23 0.00 37.26 2.92
416 417 1.067283 GTGGATCCTCGCATCGATCAT 60.067 52.381 14.23 0.00 37.26 2.45
417 418 1.067354 TGGATCCTCGCATCGATCATG 60.067 52.381 14.23 0.00 37.26 3.07
418 419 1.067283 GGATCCTCGCATCGATCATGT 60.067 52.381 3.84 0.00 37.26 3.21
419 420 2.257894 GATCCTCGCATCGATCATGTC 58.742 52.381 0.00 0.00 35.88 3.06
420 421 0.315251 TCCTCGCATCGATCATGTCC 59.685 55.000 0.00 0.00 34.61 4.02
421 422 1.005804 CCTCGCATCGATCATGTCCG 61.006 60.000 0.00 0.00 34.61 4.79
422 423 0.318191 CTCGCATCGATCATGTCCGT 60.318 55.000 0.00 0.00 34.61 4.69
423 424 0.317854 TCGCATCGATCATGTCCGTC 60.318 55.000 0.00 0.00 34.56 4.79
424 425 1.278172 CGCATCGATCATGTCCGTCC 61.278 60.000 0.00 0.71 34.56 4.79
425 426 1.278172 GCATCGATCATGTCCGTCCG 61.278 60.000 0.00 0.00 34.56 4.79
426 427 0.030773 CATCGATCATGTCCGTCCGT 59.969 55.000 0.00 0.00 0.00 4.69
427 428 0.744874 ATCGATCATGTCCGTCCGTT 59.255 50.000 0.00 0.00 0.00 4.44
428 429 0.099968 TCGATCATGTCCGTCCGTTC 59.900 55.000 8.74 0.00 0.00 3.95
429 430 1.200474 CGATCATGTCCGTCCGTTCG 61.200 60.000 0.00 0.00 0.00 3.95
430 431 1.480219 GATCATGTCCGTCCGTTCGC 61.480 60.000 0.00 0.00 0.00 4.70
431 432 2.901051 ATCATGTCCGTCCGTTCGCC 62.901 60.000 0.00 0.00 0.00 5.54
432 433 4.789075 ATGTCCGTCCGTTCGCCG 62.789 66.667 0.00 0.00 0.00 6.46
444 445 3.650907 TTCGCCGGCGCTGACAATA 62.651 57.895 42.78 21.64 39.59 1.90
445 446 3.925238 CGCCGGCGCTGACAATAC 61.925 66.667 38.48 0.00 0.00 1.89
446 447 3.925238 GCCGGCGCTGACAATACG 61.925 66.667 20.25 4.38 0.00 3.06
447 448 2.202690 CCGGCGCTGACAATACGA 60.203 61.111 20.25 0.00 0.00 3.43
448 449 1.807981 CCGGCGCTGACAATACGAA 60.808 57.895 20.25 0.00 0.00 3.85
449 450 1.355796 CCGGCGCTGACAATACGAAA 61.356 55.000 20.25 0.00 0.00 3.46
450 451 0.025001 CGGCGCTGACAATACGAAAG 59.975 55.000 11.90 0.00 0.00 2.62
451 452 1.355971 GGCGCTGACAATACGAAAGA 58.644 50.000 7.64 0.00 0.00 2.52
452 453 1.730064 GGCGCTGACAATACGAAAGAA 59.270 47.619 7.64 0.00 0.00 2.52
453 454 2.158841 GGCGCTGACAATACGAAAGAAA 59.841 45.455 7.64 0.00 0.00 2.52
454 455 3.408150 GCGCTGACAATACGAAAGAAAG 58.592 45.455 0.00 0.00 0.00 2.62
455 456 3.122948 GCGCTGACAATACGAAAGAAAGA 59.877 43.478 0.00 0.00 0.00 2.52
456 457 4.377022 GCGCTGACAATACGAAAGAAAGAA 60.377 41.667 0.00 0.00 0.00 2.52
457 458 5.675970 CGCTGACAATACGAAAGAAAGAAA 58.324 37.500 0.00 0.00 0.00 2.52
458 459 5.560378 CGCTGACAATACGAAAGAAAGAAAC 59.440 40.000 0.00 0.00 0.00 2.78
459 460 5.851703 GCTGACAATACGAAAGAAAGAAACC 59.148 40.000 0.00 0.00 0.00 3.27
460 461 6.293462 GCTGACAATACGAAAGAAAGAAACCT 60.293 38.462 0.00 0.00 0.00 3.50
461 462 7.562454 TGACAATACGAAAGAAAGAAACCTT 57.438 32.000 0.00 0.00 0.00 3.50
462 463 7.992008 TGACAATACGAAAGAAAGAAACCTTT 58.008 30.769 0.00 0.00 36.64 3.11
463 464 8.126700 TGACAATACGAAAGAAAGAAACCTTTC 58.873 33.333 9.25 9.25 46.07 2.62
480 481 3.353836 CACAGTTTCACCCGGCCG 61.354 66.667 21.04 21.04 0.00 6.13
540 543 4.143333 CCCTCGATTCGGCCGTGT 62.143 66.667 27.15 15.28 0.00 4.49
541 544 2.885644 CCTCGATTCGGCCGTGTG 60.886 66.667 27.15 13.78 0.00 3.82
542 545 3.554692 CTCGATTCGGCCGTGTGC 61.555 66.667 27.15 12.22 40.16 4.57
543 546 3.989698 CTCGATTCGGCCGTGTGCT 62.990 63.158 27.15 6.20 40.92 4.40
544 547 3.118454 CGATTCGGCCGTGTGCTT 61.118 61.111 27.15 4.44 40.92 3.91
545 548 2.677003 CGATTCGGCCGTGTGCTTT 61.677 57.895 27.15 2.90 40.92 3.51
546 549 1.134694 GATTCGGCCGTGTGCTTTC 59.865 57.895 27.15 8.77 40.92 2.62
547 550 1.298859 GATTCGGCCGTGTGCTTTCT 61.299 55.000 27.15 0.00 40.92 2.52
548 551 0.036765 ATTCGGCCGTGTGCTTTCTA 60.037 50.000 27.15 0.00 40.92 2.10
549 552 0.036765 TTCGGCCGTGTGCTTTCTAT 60.037 50.000 27.15 0.00 40.92 1.98
550 553 0.459585 TCGGCCGTGTGCTTTCTATC 60.460 55.000 27.15 0.00 40.92 2.08
551 554 0.739462 CGGCCGTGTGCTTTCTATCA 60.739 55.000 19.50 0.00 40.92 2.15
559 562 4.595116 GTGTGCTTTCTATCATGCATGTC 58.405 43.478 25.43 7.15 37.76 3.06
567 570 5.465532 TCTATCATGCATGTCCTCTTCTC 57.534 43.478 25.43 0.00 0.00 2.87
570 573 4.564782 TCATGCATGTCCTCTTCTCTTT 57.435 40.909 25.43 0.00 0.00 2.52
579 582 4.162320 TGTCCTCTTCTCTTTTGTGTGACT 59.838 41.667 0.00 0.00 0.00 3.41
581 584 4.405680 TCCTCTTCTCTTTTGTGTGACTGA 59.594 41.667 0.00 0.00 0.00 3.41
582 585 5.070981 TCCTCTTCTCTTTTGTGTGACTGAT 59.929 40.000 0.00 0.00 0.00 2.90
583 586 5.178996 CCTCTTCTCTTTTGTGTGACTGATG 59.821 44.000 0.00 0.00 0.00 3.07
584 587 5.917462 TCTTCTCTTTTGTGTGACTGATGA 58.083 37.500 0.00 0.00 0.00 2.92
600 603 4.989168 ACTGATGAGAACGTAAAAGTGGAC 59.011 41.667 0.00 0.00 0.00 4.02
603 606 3.724374 TGAGAACGTAAAAGTGGACCTG 58.276 45.455 0.00 0.00 0.00 4.00
606 609 0.105408 ACGTAAAAGTGGACCTGCGT 59.895 50.000 0.00 0.00 0.00 5.24
607 610 1.340889 ACGTAAAAGTGGACCTGCGTA 59.659 47.619 0.00 0.00 0.00 4.42
608 611 2.224018 ACGTAAAAGTGGACCTGCGTAA 60.224 45.455 0.00 0.00 0.00 3.18
609 612 2.801679 CGTAAAAGTGGACCTGCGTAAA 59.198 45.455 0.00 0.00 0.00 2.01
610 613 3.120786 CGTAAAAGTGGACCTGCGTAAAG 60.121 47.826 0.00 0.00 0.00 1.85
611 614 2.922740 AAAGTGGACCTGCGTAAAGA 57.077 45.000 0.00 0.00 0.00 2.52
612 615 2.922740 AAGTGGACCTGCGTAAAGAA 57.077 45.000 0.00 0.00 0.00 2.52
613 616 2.922740 AGTGGACCTGCGTAAAGAAA 57.077 45.000 0.00 0.00 0.00 2.52
614 617 2.767505 AGTGGACCTGCGTAAAGAAAG 58.232 47.619 0.00 0.00 0.00 2.62
615 618 2.104281 AGTGGACCTGCGTAAAGAAAGT 59.896 45.455 0.00 0.00 0.00 2.66
616 619 3.322828 AGTGGACCTGCGTAAAGAAAGTA 59.677 43.478 0.00 0.00 0.00 2.24
617 620 4.060205 GTGGACCTGCGTAAAGAAAGTAA 58.940 43.478 0.00 0.00 0.00 2.24
618 621 4.512571 GTGGACCTGCGTAAAGAAAGTAAA 59.487 41.667 0.00 0.00 0.00 2.01
619 622 5.007921 GTGGACCTGCGTAAAGAAAGTAAAA 59.992 40.000 0.00 0.00 0.00 1.52
620 623 5.237779 TGGACCTGCGTAAAGAAAGTAAAAG 59.762 40.000 0.00 0.00 0.00 2.27
621 624 5.237996 GGACCTGCGTAAAGAAAGTAAAAGT 59.762 40.000 0.00 0.00 0.00 2.66
622 625 6.056428 ACCTGCGTAAAGAAAGTAAAAGTG 57.944 37.500 0.00 0.00 0.00 3.16
623 626 5.008316 ACCTGCGTAAAGAAAGTAAAAGTGG 59.992 40.000 0.00 0.00 0.00 4.00
656 659 4.059511 GAGCATCAGATGTTGATCTCCAG 58.940 47.826 12.18 0.00 44.76 3.86
676 679 5.104776 TCCAGAGAGAGAGAGAGAGAGAAAG 60.105 48.000 0.00 0.00 0.00 2.62
678 681 4.785376 AGAGAGAGAGAGAGAGAGAAAGGT 59.215 45.833 0.00 0.00 0.00 3.50
679 682 5.964477 AGAGAGAGAGAGAGAGAGAAAGGTA 59.036 44.000 0.00 0.00 0.00 3.08
680 683 5.990668 AGAGAGAGAGAGAGAGAAAGGTAC 58.009 45.833 0.00 0.00 0.00 3.34
703 708 2.396590 ATCGGATTAACGCTTGGTGT 57.603 45.000 0.00 0.00 0.00 4.16
923 1476 2.082231 CCCTCTCGTTTCGTCTGTCTA 58.918 52.381 0.00 0.00 0.00 2.59
1033 1624 4.052199 CCTTCCCCCTTCTCCCTATTTAA 58.948 47.826 0.00 0.00 0.00 1.52
1038 1629 3.333980 CCCCTTCTCCCTATTTAATCCCC 59.666 52.174 0.00 0.00 0.00 4.81
1098 1738 1.207791 CCACCTCCTACCAGCTCAAT 58.792 55.000 0.00 0.00 0.00 2.57
1101 1742 1.834263 ACCTCCTACCAGCTCAATCAC 59.166 52.381 0.00 0.00 0.00 3.06
1102 1743 1.833630 CCTCCTACCAGCTCAATCACA 59.166 52.381 0.00 0.00 0.00 3.58
1103 1744 2.419297 CCTCCTACCAGCTCAATCACAC 60.419 54.545 0.00 0.00 0.00 3.82
1104 1745 2.499289 CTCCTACCAGCTCAATCACACT 59.501 50.000 0.00 0.00 0.00 3.55
1105 1746 2.906389 TCCTACCAGCTCAATCACACTT 59.094 45.455 0.00 0.00 0.00 3.16
1221 3333 2.124819 CCAGCTGCTTCGGCTCAT 60.125 61.111 8.66 0.00 43.23 2.90
1234 3346 2.413351 CTCATCATCGTCGCCGGT 59.587 61.111 1.90 0.00 33.95 5.28
1479 3591 5.563842 CAATCGCCTGAACTGAATTCTAAC 58.436 41.667 7.05 0.00 38.25 2.34
1504 3616 2.143925 AGTAGCAGCAAACGTCCTTTC 58.856 47.619 0.00 0.00 0.00 2.62
1512 3624 5.205565 CAGCAAACGTCCTTTCTAACTTTC 58.794 41.667 0.00 0.00 0.00 2.62
1593 3761 0.730840 AAAGCAGTTTATACGGCCGC 59.269 50.000 28.58 7.73 45.16 6.53
1667 3849 9.512435 CACATAAGAATCAAAATCAGTCCATTC 57.488 33.333 0.00 0.00 0.00 2.67
1715 7398 3.372660 TGCAACAGATACGTGTACACA 57.627 42.857 24.98 7.66 0.00 3.72
1719 7402 4.166523 CAACAGATACGTGTACACAGAGG 58.833 47.826 24.98 11.47 0.00 3.69
1753 7464 2.243810 TGGTCGGGAATTTCTTTTGGG 58.756 47.619 0.00 0.00 0.00 4.12
1813 7545 0.106894 GGTGGAATCATCTCCCGTCC 59.893 60.000 0.00 0.00 34.22 4.79
1814 7546 0.106894 GTGGAATCATCTCCCGTCCC 59.893 60.000 0.00 0.00 34.22 4.46
1815 7547 1.367840 GGAATCATCTCCCGTCCCG 59.632 63.158 0.00 0.00 0.00 5.14
1816 7548 1.400530 GGAATCATCTCCCGTCCCGT 61.401 60.000 0.00 0.00 0.00 5.28
1817 7549 0.032267 GAATCATCTCCCGTCCCGTC 59.968 60.000 0.00 0.00 0.00 4.79
1857 7589 2.270850 GGCTGCCCGTATCCAACA 59.729 61.111 7.66 0.00 0.00 3.33
1858 7590 1.377987 GGCTGCCCGTATCCAACAA 60.378 57.895 7.66 0.00 0.00 2.83
1873 11271 8.283992 CGTATCCAACAAATGTACAAACAGTAA 58.716 33.333 0.00 0.00 39.49 2.24
1914 11320 4.268884 GCAAAGGATTAGCGAGTAGTGAAG 59.731 45.833 0.00 0.00 0.00 3.02
1924 11330 4.926238 AGCGAGTAGTGAAGAGTCAAAATG 59.074 41.667 0.00 0.00 34.87 2.32
1951 11363 1.270826 CAACCACACACACACACCAAA 59.729 47.619 0.00 0.00 0.00 3.28
1952 11364 0.885196 ACCACACACACACACCAAAC 59.115 50.000 0.00 0.00 0.00 2.93
1953 11365 0.179176 CCACACACACACACCAAACG 60.179 55.000 0.00 0.00 0.00 3.60
1983 11395 0.249911 AGAAGAACCAGGTCGTGCAC 60.250 55.000 6.82 6.82 0.00 4.57
2019 11431 1.420312 GTGGAGCTTTCGCGCTAAC 59.580 57.895 5.56 0.00 41.08 2.34
2033 11445 3.727970 CGCGCTAACAAAAATCTTCCTCC 60.728 47.826 5.56 0.00 0.00 4.30
2043 11455 0.909610 ATCTTCCTCCGCACTTCCCA 60.910 55.000 0.00 0.00 0.00 4.37
2061 11490 5.200368 TCCCATTCTTTCAGAAAAACAGC 57.800 39.130 0.00 0.00 37.82 4.40
2062 11491 4.039124 TCCCATTCTTTCAGAAAAACAGCC 59.961 41.667 0.00 0.00 37.82 4.85
2064 11493 4.499696 CCATTCTTTCAGAAAAACAGCCGT 60.500 41.667 0.00 0.00 37.82 5.68
2073 16076 1.225376 AAAACAGCCGTGAATCGCGA 61.225 50.000 18.43 13.09 39.94 5.87
2242 17041 4.643334 TCATAGACTTACAAAGCCTCGCTA 59.357 41.667 0.00 0.00 38.25 4.26
2275 17074 2.601240 TTTGGATCTGGCAATGGTGA 57.399 45.000 0.00 0.00 0.00 4.02
2283 17082 1.304381 GGCAATGGTGAAGGCCTGA 60.304 57.895 5.69 0.00 43.09 3.86
2295 17094 0.252881 AGGCCTGACATCCCTTCTCA 60.253 55.000 3.11 0.00 0.00 3.27
2297 17096 0.460987 GCCTGACATCCCTTCTCACG 60.461 60.000 0.00 0.00 0.00 4.35
2326 18357 3.423154 GGCGCCGAACTTGGACAG 61.423 66.667 12.58 0.00 0.00 3.51
2351 18382 3.958147 ATGGGTTCGGCGAGTGCAG 62.958 63.158 10.46 0.00 45.35 4.41
2363 18394 1.526917 AGTGCAGCAACCCACTCAC 60.527 57.895 0.00 0.00 37.77 3.51
2377 18408 2.288702 CCACTCACTTCACTCACCTCTG 60.289 54.545 0.00 0.00 0.00 3.35
2397 18428 1.826096 GTAGCTCCGTCCCTTCTTCTT 59.174 52.381 0.00 0.00 0.00 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.451067 AGCAATGTCTCAAGCTCAGC 58.549 50.000 0.00 0.00 30.05 4.26
5 6 0.807496 GGTGGAGCAATGTCTCAAGC 59.193 55.000 6.92 2.40 34.84 4.01
6 7 2.486472 AGGTGGAGCAATGTCTCAAG 57.514 50.000 6.92 0.00 34.84 3.02
7 8 2.886523 CAAAGGTGGAGCAATGTCTCAA 59.113 45.455 6.92 0.00 34.84 3.02
8 9 2.507484 CAAAGGTGGAGCAATGTCTCA 58.493 47.619 6.92 0.00 34.84 3.27
9 10 1.200948 GCAAAGGTGGAGCAATGTCTC 59.799 52.381 0.00 0.00 0.00 3.36
10 11 1.251251 GCAAAGGTGGAGCAATGTCT 58.749 50.000 0.00 0.00 0.00 3.41
11 12 0.244721 GGCAAAGGTGGAGCAATGTC 59.755 55.000 0.00 0.00 0.00 3.06
12 13 1.526575 CGGCAAAGGTGGAGCAATGT 61.527 55.000 0.00 0.00 0.00 2.71
13 14 1.213537 CGGCAAAGGTGGAGCAATG 59.786 57.895 0.00 0.00 0.00 2.82
14 15 2.639327 GCGGCAAAGGTGGAGCAAT 61.639 57.895 0.00 0.00 0.00 3.56
15 16 3.294493 GCGGCAAAGGTGGAGCAA 61.294 61.111 0.00 0.00 0.00 3.91
16 17 4.577677 TGCGGCAAAGGTGGAGCA 62.578 61.111 0.00 0.00 0.00 4.26
17 18 4.043200 GTGCGGCAAAGGTGGAGC 62.043 66.667 3.23 0.00 0.00 4.70
18 19 0.605319 TAAGTGCGGCAAAGGTGGAG 60.605 55.000 3.23 0.00 0.00 3.86
19 20 0.037590 ATAAGTGCGGCAAAGGTGGA 59.962 50.000 3.23 0.00 0.00 4.02
20 21 0.451783 GATAAGTGCGGCAAAGGTGG 59.548 55.000 3.23 0.00 0.00 4.61
21 22 1.131126 CTGATAAGTGCGGCAAAGGTG 59.869 52.381 3.23 0.00 0.00 4.00
22 23 1.003118 TCTGATAAGTGCGGCAAAGGT 59.997 47.619 3.23 0.00 0.00 3.50
23 24 1.737838 TCTGATAAGTGCGGCAAAGG 58.262 50.000 3.23 0.00 0.00 3.11
24 25 2.938451 TGATCTGATAAGTGCGGCAAAG 59.062 45.455 3.23 0.00 0.00 2.77
25 26 2.938451 CTGATCTGATAAGTGCGGCAAA 59.062 45.455 3.23 0.00 0.00 3.68
26 27 2.168313 TCTGATCTGATAAGTGCGGCAA 59.832 45.455 3.23 0.00 0.00 4.52
27 28 1.756538 TCTGATCTGATAAGTGCGGCA 59.243 47.619 0.00 0.00 0.00 5.69
28 29 2.515926 TCTGATCTGATAAGTGCGGC 57.484 50.000 1.96 0.00 0.00 6.53
29 30 3.057946 TCGATCTGATCTGATAAGTGCGG 60.058 47.826 14.40 0.00 0.00 5.69
30 31 4.152607 TCGATCTGATCTGATAAGTGCG 57.847 45.455 14.40 12.92 0.00 5.34
31 32 5.348179 CCATTCGATCTGATCTGATAAGTGC 59.652 44.000 14.40 2.33 0.00 4.40
32 33 5.868258 CCCATTCGATCTGATCTGATAAGTG 59.132 44.000 14.40 11.97 0.00 3.16
33 34 5.568423 GCCCATTCGATCTGATCTGATAAGT 60.568 44.000 14.40 1.83 0.00 2.24
34 35 4.869297 GCCCATTCGATCTGATCTGATAAG 59.131 45.833 14.40 11.72 0.00 1.73
35 36 4.284234 TGCCCATTCGATCTGATCTGATAA 59.716 41.667 14.40 7.50 0.00 1.75
36 37 3.834231 TGCCCATTCGATCTGATCTGATA 59.166 43.478 14.40 1.02 0.00 2.15
37 38 2.636403 TGCCCATTCGATCTGATCTGAT 59.364 45.455 14.33 14.33 0.00 2.90
38 39 2.041701 TGCCCATTCGATCTGATCTGA 58.958 47.619 15.16 4.63 0.00 3.27
39 40 2.141517 GTGCCCATTCGATCTGATCTG 58.858 52.381 15.16 7.16 0.00 2.90
40 41 1.764723 TGTGCCCATTCGATCTGATCT 59.235 47.619 15.16 0.00 0.00 2.75
41 42 2.141517 CTGTGCCCATTCGATCTGATC 58.858 52.381 7.60 7.60 0.00 2.92
42 43 1.813092 GCTGTGCCCATTCGATCTGAT 60.813 52.381 0.00 0.00 0.00 2.90
43 44 0.462581 GCTGTGCCCATTCGATCTGA 60.463 55.000 0.00 0.00 0.00 3.27
44 45 0.745486 TGCTGTGCCCATTCGATCTG 60.745 55.000 0.00 0.00 0.00 2.90
45 46 0.745845 GTGCTGTGCCCATTCGATCT 60.746 55.000 0.00 0.00 0.00 2.75
46 47 0.745845 AGTGCTGTGCCCATTCGATC 60.746 55.000 0.00 0.00 0.00 3.69
47 48 0.541392 TAGTGCTGTGCCCATTCGAT 59.459 50.000 0.00 0.00 0.00 3.59
48 49 0.541392 ATAGTGCTGTGCCCATTCGA 59.459 50.000 0.00 0.00 0.00 3.71
49 50 0.940126 GATAGTGCTGTGCCCATTCG 59.060 55.000 0.00 0.00 0.00 3.34
50 51 0.940126 CGATAGTGCTGTGCCCATTC 59.060 55.000 0.00 0.00 0.00 2.67
51 52 1.097547 GCGATAGTGCTGTGCCCATT 61.098 55.000 0.00 0.00 39.35 3.16
52 53 1.524621 GCGATAGTGCTGTGCCCAT 60.525 57.895 0.00 0.00 39.35 4.00
53 54 2.125147 GCGATAGTGCTGTGCCCA 60.125 61.111 0.00 0.00 39.35 5.36
54 55 2.897350 GGCGATAGTGCTGTGCCC 60.897 66.667 0.00 0.00 39.83 5.36
55 56 3.264897 CGGCGATAGTGCTGTGCC 61.265 66.667 0.00 0.00 42.29 5.01
56 57 3.929948 GCGGCGATAGTGCTGTGC 61.930 66.667 12.98 0.00 43.32 4.57
57 58 3.620428 CGCGGCGATAGTGCTGTG 61.620 66.667 19.16 0.00 44.41 3.66
61 62 1.945776 GATAAGCGCGGCGATAGTGC 61.946 60.000 28.54 6.90 44.65 4.40
62 63 0.663269 TGATAAGCGCGGCGATAGTG 60.663 55.000 28.54 0.00 39.35 2.74
63 64 0.387367 CTGATAAGCGCGGCGATAGT 60.387 55.000 28.54 12.28 39.35 2.12
64 65 0.109735 TCTGATAAGCGCGGCGATAG 60.110 55.000 28.54 14.36 0.00 2.08
65 66 0.526211 ATCTGATAAGCGCGGCGATA 59.474 50.000 28.54 17.99 0.00 2.92
66 67 0.734253 GATCTGATAAGCGCGGCGAT 60.734 55.000 28.54 19.18 0.00 4.58
67 68 1.371758 GATCTGATAAGCGCGGCGA 60.372 57.895 28.54 5.47 0.00 5.54
68 69 1.010935 ATGATCTGATAAGCGCGGCG 61.011 55.000 19.62 19.62 0.00 6.46
69 70 1.996292 TATGATCTGATAAGCGCGGC 58.004 50.000 8.83 0.00 0.00 6.53
70 71 2.786027 CGATATGATCTGATAAGCGCGG 59.214 50.000 8.83 0.00 0.00 6.46
71 72 3.685058 TCGATATGATCTGATAAGCGCG 58.315 45.455 0.00 0.00 0.00 6.86
72 73 6.254373 TCATTTCGATATGATCTGATAAGCGC 59.746 38.462 13.67 0.00 29.82 5.92
73 74 7.746526 TCATTTCGATATGATCTGATAAGCG 57.253 36.000 13.67 0.00 29.82 4.68
74 75 9.917872 CATTCATTTCGATATGATCTGATAAGC 57.082 33.333 17.56 0.00 34.67 3.09
78 79 9.110502 CATCCATTCATTTCGATATGATCTGAT 57.889 33.333 17.56 15.19 34.67 2.90
79 80 7.551617 CCATCCATTCATTTCGATATGATCTGA 59.448 37.037 17.56 13.92 34.67 3.27
80 81 7.678927 GCCATCCATTCATTTCGATATGATCTG 60.679 40.741 17.56 16.48 34.67 2.90
81 82 6.318144 GCCATCCATTCATTTCGATATGATCT 59.682 38.462 17.56 7.33 34.67 2.75
82 83 6.493116 GCCATCCATTCATTTCGATATGATC 58.507 40.000 17.56 0.00 34.67 2.92
83 84 5.065602 CGCCATCCATTCATTTCGATATGAT 59.934 40.000 17.56 7.05 34.67 2.45
84 85 4.392754 CGCCATCCATTCATTTCGATATGA 59.607 41.667 13.67 13.67 32.87 2.15
85 86 4.655027 CGCCATCCATTCATTTCGATATG 58.345 43.478 9.33 9.33 0.00 1.78
86 87 3.127548 GCGCCATCCATTCATTTCGATAT 59.872 43.478 0.00 0.00 0.00 1.63
87 88 2.483877 GCGCCATCCATTCATTTCGATA 59.516 45.455 0.00 0.00 0.00 2.92
88 89 1.267806 GCGCCATCCATTCATTTCGAT 59.732 47.619 0.00 0.00 0.00 3.59
89 90 0.662619 GCGCCATCCATTCATTTCGA 59.337 50.000 0.00 0.00 0.00 3.71
90 91 0.318107 GGCGCCATCCATTCATTTCG 60.318 55.000 24.80 0.00 0.00 3.46
91 92 0.746063 TGGCGCCATCCATTCATTTC 59.254 50.000 29.03 0.00 0.00 2.17
92 93 0.461135 GTGGCGCCATCCATTCATTT 59.539 50.000 35.23 0.00 38.57 2.32
93 94 1.394266 GGTGGCGCCATCCATTCATT 61.394 55.000 35.23 0.00 38.57 2.57
94 95 1.829533 GGTGGCGCCATCCATTCAT 60.830 57.895 35.23 0.00 38.57 2.57
95 96 2.440065 GGTGGCGCCATCCATTCA 60.440 61.111 35.23 2.76 38.57 2.57
96 97 2.124151 AGGTGGCGCCATCCATTC 60.124 61.111 35.63 19.80 38.57 2.67
97 98 2.124151 GAGGTGGCGCCATCCATT 60.124 61.111 35.63 18.64 38.57 3.16
98 99 4.552365 CGAGGTGGCGCCATCCAT 62.552 66.667 35.63 20.54 38.57 3.41
100 101 3.845259 TACGAGGTGGCGCCATCC 61.845 66.667 35.63 32.15 40.61 3.51
101 102 2.585247 GTACGAGGTGGCGCCATC 60.585 66.667 35.23 34.00 40.61 3.51
102 103 4.508128 CGTACGAGGTGGCGCCAT 62.508 66.667 35.23 19.19 40.61 4.40
104 105 3.814268 TACGTACGAGGTGGCGCC 61.814 66.667 24.41 22.73 37.58 6.53
105 106 2.577911 GTACGTACGAGGTGGCGC 60.578 66.667 24.41 0.00 33.86 6.53
115 116 2.645936 GCTCGCGGACGTACGTAC 60.646 66.667 22.87 21.87 41.18 3.67
116 117 2.815211 AGCTCGCGGACGTACGTA 60.815 61.111 22.87 9.66 41.18 3.57
117 118 4.456253 CAGCTCGCGGACGTACGT 62.456 66.667 23.04 23.04 41.18 3.57
119 120 3.332493 TTCCAGCTCGCGGACGTAC 62.332 63.158 6.13 0.00 41.18 3.67
120 121 3.057548 TTCCAGCTCGCGGACGTA 61.058 61.111 6.13 0.00 41.18 3.57
121 122 4.719369 GTTCCAGCTCGCGGACGT 62.719 66.667 6.13 0.00 41.18 4.34
123 124 2.615262 CTAGGTTCCAGCTCGCGGAC 62.615 65.000 6.13 0.00 30.29 4.79
124 125 2.361992 TAGGTTCCAGCTCGCGGA 60.362 61.111 6.13 0.00 0.00 5.54
125 126 2.105128 CTAGGTTCCAGCTCGCGG 59.895 66.667 6.13 0.00 0.00 6.46
126 127 2.583593 GCTAGGTTCCAGCTCGCG 60.584 66.667 0.00 0.00 36.07 5.87
127 128 2.583593 CGCTAGGTTCCAGCTCGC 60.584 66.667 0.00 0.00 36.86 5.03
128 129 2.105128 CCGCTAGGTTCCAGCTCG 59.895 66.667 0.00 0.00 36.86 5.03
139 140 6.670093 AACTTCATCAGTAGGGTACCGCTAG 61.670 48.000 5.65 1.16 46.61 3.42
140 141 4.873187 AACTTCATCAGTAGGGTACCGCTA 60.873 45.833 5.65 5.94 46.61 4.26
141 142 4.134361 AACTTCATCAGTAGGGTACCGCT 61.134 47.826 5.65 6.97 46.61 5.52
142 143 2.167900 AACTTCATCAGTAGGGTACCGC 59.832 50.000 5.65 0.00 46.61 5.68
143 144 3.194968 ACAACTTCATCAGTAGGGTACCG 59.805 47.826 5.65 0.00 46.61 4.02
144 145 4.020485 ACACAACTTCATCAGTAGGGTACC 60.020 45.833 2.17 2.17 42.93 3.34
145 146 5.148651 ACACAACTTCATCAGTAGGGTAC 57.851 43.478 0.00 0.00 32.94 3.34
146 147 6.014647 AGTACACAACTTCATCAGTAGGGTA 58.985 40.000 0.00 0.00 33.35 3.69
147 148 4.838986 AGTACACAACTTCATCAGTAGGGT 59.161 41.667 0.00 0.00 33.35 4.34
148 149 5.047306 TCAGTACACAACTTCATCAGTAGGG 60.047 44.000 0.00 0.00 35.76 3.53
149 150 6.025749 TCAGTACACAACTTCATCAGTAGG 57.974 41.667 0.00 0.00 35.76 3.18
150 151 6.088217 CGTTCAGTACACAACTTCATCAGTAG 59.912 42.308 0.00 0.00 35.76 2.57
151 152 5.918576 CGTTCAGTACACAACTTCATCAGTA 59.081 40.000 0.00 0.00 35.76 2.74
152 153 4.745125 CGTTCAGTACACAACTTCATCAGT 59.255 41.667 0.00 0.00 35.76 3.41
153 154 4.982295 TCGTTCAGTACACAACTTCATCAG 59.018 41.667 0.00 0.00 35.76 2.90
154 155 4.939271 TCGTTCAGTACACAACTTCATCA 58.061 39.130 0.00 0.00 35.76 3.07
155 156 5.220381 TCTCGTTCAGTACACAACTTCATC 58.780 41.667 0.00 0.00 35.76 2.92
156 157 5.196341 TCTCGTTCAGTACACAACTTCAT 57.804 39.130 0.00 0.00 35.76 2.57
157 158 4.642445 TCTCGTTCAGTACACAACTTCA 57.358 40.909 0.00 0.00 35.76 3.02
158 159 4.982916 ACATCTCGTTCAGTACACAACTTC 59.017 41.667 0.00 0.00 35.76 3.01
159 160 4.745125 CACATCTCGTTCAGTACACAACTT 59.255 41.667 0.00 0.00 35.76 2.66
160 161 4.299155 CACATCTCGTTCAGTACACAACT 58.701 43.478 0.00 0.00 39.81 3.16
161 162 3.120991 GCACATCTCGTTCAGTACACAAC 60.121 47.826 0.00 0.00 0.00 3.32
162 163 3.057019 GCACATCTCGTTCAGTACACAA 58.943 45.455 0.00 0.00 0.00 3.33
163 164 2.035321 TGCACATCTCGTTCAGTACACA 59.965 45.455 0.00 0.00 0.00 3.72
164 165 2.672714 TGCACATCTCGTTCAGTACAC 58.327 47.619 0.00 0.00 0.00 2.90
165 166 3.592898 ATGCACATCTCGTTCAGTACA 57.407 42.857 0.00 0.00 0.00 2.90
166 167 6.036083 ACAATAATGCACATCTCGTTCAGTAC 59.964 38.462 0.00 0.00 24.40 2.73
167 168 6.035975 CACAATAATGCACATCTCGTTCAGTA 59.964 38.462 0.00 0.00 0.00 2.74
168 169 4.937620 ACAATAATGCACATCTCGTTCAGT 59.062 37.500 0.00 0.00 0.00 3.41
169 170 5.260900 CACAATAATGCACATCTCGTTCAG 58.739 41.667 0.00 0.00 0.00 3.02
170 171 4.437255 GCACAATAATGCACATCTCGTTCA 60.437 41.667 0.00 0.00 45.39 3.18
171 172 4.031028 GCACAATAATGCACATCTCGTTC 58.969 43.478 0.00 0.00 45.39 3.95
172 173 3.485711 CGCACAATAATGCACATCTCGTT 60.486 43.478 0.00 0.00 46.47 3.85
173 174 2.030823 CGCACAATAATGCACATCTCGT 59.969 45.455 0.00 0.00 46.47 4.18
174 175 2.632228 CGCACAATAATGCACATCTCG 58.368 47.619 0.00 0.00 46.47 4.04
175 176 2.378806 GCGCACAATAATGCACATCTC 58.621 47.619 0.30 0.00 46.47 2.75
176 177 1.268184 CGCGCACAATAATGCACATCT 60.268 47.619 8.75 0.00 46.47 2.90
177 178 1.114842 CGCGCACAATAATGCACATC 58.885 50.000 8.75 0.00 46.47 3.06
178 179 0.451383 ACGCGCACAATAATGCACAT 59.549 45.000 5.73 0.00 46.47 3.21
179 180 0.454117 CACGCGCACAATAATGCACA 60.454 50.000 5.73 0.00 46.47 4.57
180 181 1.133363 CCACGCGCACAATAATGCAC 61.133 55.000 5.73 0.00 46.47 4.57
181 182 1.136356 CCACGCGCACAATAATGCA 59.864 52.632 5.73 0.00 46.47 3.96
182 183 0.179176 TTCCACGCGCACAATAATGC 60.179 50.000 5.73 0.00 42.48 3.56
183 184 1.396648 TCTTCCACGCGCACAATAATG 59.603 47.619 5.73 0.00 0.00 1.90
184 185 1.396996 GTCTTCCACGCGCACAATAAT 59.603 47.619 5.73 0.00 0.00 1.28
185 186 0.793861 GTCTTCCACGCGCACAATAA 59.206 50.000 5.73 0.00 0.00 1.40
186 187 1.348538 CGTCTTCCACGCGCACAATA 61.349 55.000 5.73 0.00 42.87 1.90
187 188 2.667318 CGTCTTCCACGCGCACAAT 61.667 57.895 5.73 0.00 42.87 2.71
188 189 3.334751 CGTCTTCCACGCGCACAA 61.335 61.111 5.73 0.00 42.87 3.33
207 208 0.808453 CCAACACCAACACGAGACGT 60.808 55.000 0.00 0.00 42.36 4.34
208 209 0.808453 ACCAACACCAACACGAGACG 60.808 55.000 0.00 0.00 0.00 4.18
209 210 0.935196 GACCAACACCAACACGAGAC 59.065 55.000 0.00 0.00 0.00 3.36
210 211 0.179067 GGACCAACACCAACACGAGA 60.179 55.000 0.00 0.00 0.00 4.04
211 212 0.179056 AGGACCAACACCAACACGAG 60.179 55.000 0.00 0.00 0.00 4.18
212 213 0.462937 CAGGACCAACACCAACACGA 60.463 55.000 0.00 0.00 0.00 4.35
213 214 2.021722 CAGGACCAACACCAACACG 58.978 57.895 0.00 0.00 0.00 4.49
214 215 1.733526 GCAGGACCAACACCAACAC 59.266 57.895 0.00 0.00 0.00 3.32
215 216 1.821759 CGCAGGACCAACACCAACA 60.822 57.895 0.00 0.00 0.00 3.33
216 217 1.822186 ACGCAGGACCAACACCAAC 60.822 57.895 0.00 0.00 0.00 3.77
217 218 1.821759 CACGCAGGACCAACACCAA 60.822 57.895 0.00 0.00 0.00 3.67
218 219 2.203139 CACGCAGGACCAACACCA 60.203 61.111 0.00 0.00 0.00 4.17
219 220 3.660111 GCACGCAGGACCAACACC 61.660 66.667 0.00 0.00 0.00 4.16
220 221 2.896801 CTGCACGCAGGACCAACAC 61.897 63.158 11.29 0.00 40.17 3.32
221 222 2.591429 CTGCACGCAGGACCAACA 60.591 61.111 11.29 0.00 40.17 3.33
252 253 1.928567 TTACCCTTCCCCTGCCCTG 60.929 63.158 0.00 0.00 0.00 4.45
253 254 1.929088 GTTACCCTTCCCCTGCCCT 60.929 63.158 0.00 0.00 0.00 5.19
254 255 2.681591 GTTACCCTTCCCCTGCCC 59.318 66.667 0.00 0.00 0.00 5.36
255 256 1.795951 TTGGTTACCCTTCCCCTGCC 61.796 60.000 0.00 0.00 0.00 4.85
256 257 0.113580 TTTGGTTACCCTTCCCCTGC 59.886 55.000 0.00 0.00 0.00 4.85
257 258 1.549265 GGTTTGGTTACCCTTCCCCTG 60.549 57.143 0.00 0.00 31.71 4.45
258 259 0.781920 GGTTTGGTTACCCTTCCCCT 59.218 55.000 0.00 0.00 31.71 4.79
259 260 0.781920 AGGTTTGGTTACCCTTCCCC 59.218 55.000 0.00 0.00 39.08 4.81
260 261 2.616256 CGTAGGTTTGGTTACCCTTCCC 60.616 54.545 0.00 0.00 39.08 3.97
261 262 2.038952 ACGTAGGTTTGGTTACCCTTCC 59.961 50.000 0.00 0.00 39.08 3.46
262 263 3.407424 ACGTAGGTTTGGTTACCCTTC 57.593 47.619 0.00 0.00 39.08 3.46
263 264 4.021104 GTCTACGTAGGTTTGGTTACCCTT 60.021 45.833 22.01 0.00 39.08 3.95
264 265 3.511540 GTCTACGTAGGTTTGGTTACCCT 59.488 47.826 22.01 0.00 39.08 4.34
265 266 3.673323 CGTCTACGTAGGTTTGGTTACCC 60.673 52.174 22.01 0.00 35.18 3.69
266 267 3.501950 CGTCTACGTAGGTTTGGTTACC 58.498 50.000 22.01 0.00 34.99 2.85
267 268 3.190535 TCCGTCTACGTAGGTTTGGTTAC 59.809 47.826 22.01 9.38 37.74 2.50
268 269 3.417101 TCCGTCTACGTAGGTTTGGTTA 58.583 45.455 22.01 0.00 37.74 2.85
269 270 2.229784 CTCCGTCTACGTAGGTTTGGTT 59.770 50.000 22.01 0.00 37.74 3.67
270 271 1.815003 CTCCGTCTACGTAGGTTTGGT 59.185 52.381 22.01 0.00 37.74 3.67
271 272 1.133790 CCTCCGTCTACGTAGGTTTGG 59.866 57.143 22.01 17.10 40.11 3.28
272 273 1.468736 GCCTCCGTCTACGTAGGTTTG 60.469 57.143 22.01 9.50 45.71 2.93
273 274 0.813821 GCCTCCGTCTACGTAGGTTT 59.186 55.000 22.01 0.00 45.71 3.27
274 275 0.322816 TGCCTCCGTCTACGTAGGTT 60.323 55.000 22.01 0.00 45.71 3.50
275 276 0.747283 CTGCCTCCGTCTACGTAGGT 60.747 60.000 22.01 0.00 45.71 3.08
276 277 1.445716 CCTGCCTCCGTCTACGTAGG 61.446 65.000 22.01 9.54 46.56 3.18
277 278 0.463295 TCCTGCCTCCGTCTACGTAG 60.463 60.000 16.73 16.73 37.74 3.51
278 279 0.182061 ATCCTGCCTCCGTCTACGTA 59.818 55.000 1.41 0.00 37.74 3.57
279 280 1.076923 ATCCTGCCTCCGTCTACGT 60.077 57.895 1.41 0.00 37.74 3.57
280 281 1.360551 CATCCTGCCTCCGTCTACG 59.639 63.158 0.00 0.00 39.44 3.51
281 282 1.043673 ACCATCCTGCCTCCGTCTAC 61.044 60.000 0.00 0.00 0.00 2.59
282 283 0.325296 AACCATCCTGCCTCCGTCTA 60.325 55.000 0.00 0.00 0.00 2.59
283 284 1.201429 AAACCATCCTGCCTCCGTCT 61.201 55.000 0.00 0.00 0.00 4.18
284 285 0.322546 AAAACCATCCTGCCTCCGTC 60.323 55.000 0.00 0.00 0.00 4.79
285 286 0.112412 AAAAACCATCCTGCCTCCGT 59.888 50.000 0.00 0.00 0.00 4.69
286 287 2.961424 AAAAACCATCCTGCCTCCG 58.039 52.632 0.00 0.00 0.00 4.63
301 302 1.951510 CTCGCCTGAGCAGCAAAAA 59.048 52.632 0.00 0.00 39.83 1.94
302 303 3.659334 CTCGCCTGAGCAGCAAAA 58.341 55.556 0.00 0.00 39.83 2.44
319 320 3.300667 CTCGGTCAAAGCACGCAGC 62.301 63.158 0.00 0.00 46.19 5.25
320 321 2.856032 CTCGGTCAAAGCACGCAG 59.144 61.111 0.00 0.00 0.00 5.18
321 322 3.345808 GCTCGGTCAAAGCACGCA 61.346 61.111 0.00 0.00 39.61 5.24
322 323 3.300667 CTGCTCGGTCAAAGCACGC 62.301 63.158 0.00 0.00 44.51 5.34
323 324 1.621301 CTCTGCTCGGTCAAAGCACG 61.621 60.000 0.00 0.00 44.51 5.34
324 325 1.905922 GCTCTGCTCGGTCAAAGCAC 61.906 60.000 0.00 0.00 44.51 4.40
326 327 2.734673 CGCTCTGCTCGGTCAAAGC 61.735 63.158 0.00 0.00 40.26 3.51
327 328 0.946221 AACGCTCTGCTCGGTCAAAG 60.946 55.000 0.00 0.00 0.00 2.77
328 329 0.944311 GAACGCTCTGCTCGGTCAAA 60.944 55.000 0.00 0.00 42.68 2.69
329 330 1.372997 GAACGCTCTGCTCGGTCAA 60.373 57.895 0.00 0.00 42.68 3.18
330 331 2.258591 GAACGCTCTGCTCGGTCA 59.741 61.111 0.00 0.00 42.68 4.02
331 332 2.089349 GTGAACGCTCTGCTCGGTC 61.089 63.158 0.00 0.00 43.38 4.79
332 333 2.049063 GTGAACGCTCTGCTCGGT 60.049 61.111 0.00 0.00 0.00 4.69
333 334 1.803519 GAGTGAACGCTCTGCTCGG 60.804 63.158 7.95 0.00 32.99 4.63
334 335 2.148982 CGAGTGAACGCTCTGCTCG 61.149 63.158 14.96 14.96 39.47 5.03
335 336 0.796491 CTCGAGTGAACGCTCTGCTC 60.796 60.000 3.62 0.00 33.55 4.26
336 337 1.211449 CTCGAGTGAACGCTCTGCT 59.789 57.895 3.62 0.00 33.55 4.24
337 338 2.440569 GCTCGAGTGAACGCTCTGC 61.441 63.158 15.13 12.02 33.55 4.26
338 339 0.664466 TTGCTCGAGTGAACGCTCTG 60.664 55.000 15.13 7.16 33.55 3.35
339 340 0.032130 TTTGCTCGAGTGAACGCTCT 59.968 50.000 15.13 0.00 33.55 4.09
340 341 0.436531 CTTTGCTCGAGTGAACGCTC 59.563 55.000 15.13 5.43 0.00 5.03
341 342 0.249489 ACTTTGCTCGAGTGAACGCT 60.249 50.000 15.13 0.00 0.00 5.07
342 343 0.161870 GACTTTGCTCGAGTGAACGC 59.838 55.000 15.13 0.00 0.00 4.84
343 344 1.190323 GTGACTTTGCTCGAGTGAACG 59.810 52.381 15.13 7.66 0.00 3.95
344 345 1.527311 GGTGACTTTGCTCGAGTGAAC 59.473 52.381 15.13 0.00 0.00 3.18
345 346 1.412710 AGGTGACTTTGCTCGAGTGAA 59.587 47.619 15.13 8.25 37.44 3.18
346 347 1.000163 GAGGTGACTTTGCTCGAGTGA 60.000 52.381 15.13 0.00 44.43 3.41
347 348 1.423395 GAGGTGACTTTGCTCGAGTG 58.577 55.000 15.13 4.93 44.43 3.51
348 349 0.039074 CGAGGTGACTTTGCTCGAGT 60.039 55.000 15.13 0.00 44.43 4.18
349 350 1.347817 GCGAGGTGACTTTGCTCGAG 61.348 60.000 8.45 8.45 44.43 4.04
350 351 1.372997 GCGAGGTGACTTTGCTCGA 60.373 57.895 12.06 0.00 44.43 4.04
351 352 2.383527 GGCGAGGTGACTTTGCTCG 61.384 63.158 6.89 5.82 44.43 5.03
352 353 2.383527 CGGCGAGGTGACTTTGCTC 61.384 63.158 0.00 0.00 44.43 4.26
353 354 2.357517 CGGCGAGGTGACTTTGCT 60.358 61.111 0.00 0.00 44.43 3.91
354 355 2.665185 ACGGCGAGGTGACTTTGC 60.665 61.111 16.62 0.00 44.43 3.68
355 356 2.372690 CGACGGCGAGGTGACTTTG 61.373 63.158 16.62 0.00 44.43 2.77
356 357 2.049433 CGACGGCGAGGTGACTTT 60.049 61.111 16.62 0.00 44.43 2.66
357 358 2.981909 TCGACGGCGAGGTGACTT 60.982 61.111 10.67 0.00 44.43 3.01
369 370 0.523072 TACTTTCCGTTCCCTCGACG 59.477 55.000 0.00 0.00 40.05 5.12
370 371 1.815003 TCTACTTTCCGTTCCCTCGAC 59.185 52.381 0.00 0.00 0.00 4.20
371 372 1.815003 GTCTACTTTCCGTTCCCTCGA 59.185 52.381 0.00 0.00 0.00 4.04
372 373 1.542915 TGTCTACTTTCCGTTCCCTCG 59.457 52.381 0.00 0.00 0.00 4.63
373 374 3.672767 TTGTCTACTTTCCGTTCCCTC 57.327 47.619 0.00 0.00 0.00 4.30
374 375 3.736720 GTTTGTCTACTTTCCGTTCCCT 58.263 45.455 0.00 0.00 0.00 4.20
375 376 2.477754 CGTTTGTCTACTTTCCGTTCCC 59.522 50.000 0.00 0.00 0.00 3.97
376 377 3.060070 CACGTTTGTCTACTTTCCGTTCC 60.060 47.826 0.00 0.00 0.00 3.62
377 378 3.060070 CCACGTTTGTCTACTTTCCGTTC 60.060 47.826 0.00 0.00 0.00 3.95
378 379 2.867975 CCACGTTTGTCTACTTTCCGTT 59.132 45.455 0.00 0.00 0.00 4.44
379 380 2.101249 TCCACGTTTGTCTACTTTCCGT 59.899 45.455 0.00 0.00 0.00 4.69
380 381 2.746269 TCCACGTTTGTCTACTTTCCG 58.254 47.619 0.00 0.00 0.00 4.30
381 382 3.683340 GGATCCACGTTTGTCTACTTTCC 59.317 47.826 6.95 0.00 0.00 3.13
382 383 4.566987 AGGATCCACGTTTGTCTACTTTC 58.433 43.478 15.82 0.00 0.00 2.62
383 384 4.566987 GAGGATCCACGTTTGTCTACTTT 58.433 43.478 15.82 0.00 0.00 2.66
384 385 3.367087 CGAGGATCCACGTTTGTCTACTT 60.367 47.826 21.81 0.00 0.00 2.24
385 386 2.163815 CGAGGATCCACGTTTGTCTACT 59.836 50.000 21.81 0.00 0.00 2.57
386 387 2.527100 CGAGGATCCACGTTTGTCTAC 58.473 52.381 21.81 0.00 0.00 2.59
387 388 1.135199 GCGAGGATCCACGTTTGTCTA 60.135 52.381 28.52 0.00 32.86 2.59
388 389 0.389948 GCGAGGATCCACGTTTGTCT 60.390 55.000 28.52 0.00 32.86 3.41
389 390 0.669318 TGCGAGGATCCACGTTTGTC 60.669 55.000 28.52 14.60 32.86 3.18
390 391 0.036388 ATGCGAGGATCCACGTTTGT 60.036 50.000 28.52 12.39 32.86 2.83
391 392 0.652592 GATGCGAGGATCCACGTTTG 59.347 55.000 28.52 7.45 32.86 2.93
392 393 0.806102 CGATGCGAGGATCCACGTTT 60.806 55.000 28.52 18.08 32.86 3.60
393 394 1.226974 CGATGCGAGGATCCACGTT 60.227 57.895 28.52 18.41 32.86 3.99
394 395 1.456196 ATCGATGCGAGGATCCACGT 61.456 55.000 28.52 13.26 39.91 4.49
395 396 0.730834 GATCGATGCGAGGATCCACG 60.731 60.000 25.12 25.12 39.91 4.94
396 397 0.315251 TGATCGATGCGAGGATCCAC 59.685 55.000 15.82 6.85 39.91 4.02
397 398 1.067354 CATGATCGATGCGAGGATCCA 60.067 52.381 15.82 0.00 39.91 3.41
398 399 1.067283 ACATGATCGATGCGAGGATCC 60.067 52.381 0.54 2.48 39.91 3.36
399 400 2.257894 GACATGATCGATGCGAGGATC 58.742 52.381 0.54 4.31 39.91 3.36
400 401 1.067283 GGACATGATCGATGCGAGGAT 60.067 52.381 0.54 0.00 39.91 3.24
401 402 0.315251 GGACATGATCGATGCGAGGA 59.685 55.000 0.54 0.00 39.91 3.71
402 403 1.005804 CGGACATGATCGATGCGAGG 61.006 60.000 0.54 0.00 39.91 4.63
403 404 0.318191 ACGGACATGATCGATGCGAG 60.318 55.000 0.54 0.00 39.91 5.03
404 405 0.317854 GACGGACATGATCGATGCGA 60.318 55.000 0.54 0.00 41.13 5.10
405 406 1.278172 GGACGGACATGATCGATGCG 61.278 60.000 0.54 0.00 35.15 4.73
406 407 1.278172 CGGACGGACATGATCGATGC 61.278 60.000 0.54 0.00 35.15 3.91
407 408 0.030773 ACGGACGGACATGATCGATG 59.969 55.000 0.54 0.00 38.15 3.84
408 409 0.744874 AACGGACGGACATGATCGAT 59.255 50.000 16.43 0.00 0.00 3.59
409 410 0.099968 GAACGGACGGACATGATCGA 59.900 55.000 16.43 0.00 0.00 3.59
410 411 1.200474 CGAACGGACGGACATGATCG 61.200 60.000 0.00 5.25 0.00 3.69
411 412 1.480219 GCGAACGGACGGACATGATC 61.480 60.000 0.00 0.00 0.00 2.92
412 413 1.518572 GCGAACGGACGGACATGAT 60.519 57.895 0.00 0.00 0.00 2.45
413 414 2.126228 GCGAACGGACGGACATGA 60.126 61.111 0.00 0.00 0.00 3.07
414 415 3.186047 GGCGAACGGACGGACATG 61.186 66.667 5.76 0.00 0.00 3.21
415 416 4.789075 CGGCGAACGGACGGACAT 62.789 66.667 0.00 0.00 45.90 3.06
428 429 3.925238 GTATTGTCAGCGCCGGCG 61.925 66.667 43.13 43.13 46.35 6.46
429 430 3.925238 CGTATTGTCAGCGCCGGC 61.925 66.667 19.07 19.07 40.37 6.13
430 431 1.355796 TTTCGTATTGTCAGCGCCGG 61.356 55.000 2.29 0.00 0.00 6.13
431 432 0.025001 CTTTCGTATTGTCAGCGCCG 59.975 55.000 2.29 0.00 0.00 6.46
432 433 1.355971 TCTTTCGTATTGTCAGCGCC 58.644 50.000 2.29 0.00 0.00 6.53
433 434 3.122948 TCTTTCTTTCGTATTGTCAGCGC 59.877 43.478 0.00 0.00 0.00 5.92
434 435 4.903638 TCTTTCTTTCGTATTGTCAGCG 57.096 40.909 0.00 0.00 0.00 5.18
435 436 5.851703 GGTTTCTTTCTTTCGTATTGTCAGC 59.148 40.000 0.00 0.00 0.00 4.26
436 437 7.190920 AGGTTTCTTTCTTTCGTATTGTCAG 57.809 36.000 0.00 0.00 0.00 3.51
437 438 7.562454 AAGGTTTCTTTCTTTCGTATTGTCA 57.438 32.000 0.00 0.00 0.00 3.58
448 449 7.791000 GGTGAAACTGTGAAAGGTTTCTTTCTT 60.791 37.037 16.55 5.58 46.47 2.52
449 450 6.350194 GGTGAAACTGTGAAAGGTTTCTTTCT 60.350 38.462 16.55 0.00 46.47 2.52
450 451 5.805486 GGTGAAACTGTGAAAGGTTTCTTTC 59.195 40.000 16.02 10.82 46.49 2.62
451 452 5.337250 GGGTGAAACTGTGAAAGGTTTCTTT 60.337 40.000 16.02 0.00 46.43 2.52
452 453 4.159693 GGGTGAAACTGTGAAAGGTTTCTT 59.840 41.667 16.02 0.00 46.43 2.52
453 454 3.699538 GGGTGAAACTGTGAAAGGTTTCT 59.300 43.478 16.02 0.00 46.43 2.52
454 455 3.488553 CGGGTGAAACTGTGAAAGGTTTC 60.489 47.826 10.43 10.43 46.46 2.78
455 456 2.425668 CGGGTGAAACTGTGAAAGGTTT 59.574 45.455 0.00 0.00 35.31 3.27
456 457 2.021457 CGGGTGAAACTGTGAAAGGTT 58.979 47.619 0.00 0.00 39.06 3.50
457 458 1.675552 CGGGTGAAACTGTGAAAGGT 58.324 50.000 0.00 0.00 36.74 3.50
458 459 0.951558 CCGGGTGAAACTGTGAAAGG 59.048 55.000 0.00 0.00 36.74 3.11
459 460 0.310854 GCCGGGTGAAACTGTGAAAG 59.689 55.000 2.18 0.00 36.74 2.62
460 461 1.104577 GGCCGGGTGAAACTGTGAAA 61.105 55.000 2.18 0.00 36.74 2.69
461 462 1.527380 GGCCGGGTGAAACTGTGAA 60.527 57.895 2.18 0.00 36.74 3.18
462 463 2.112297 GGCCGGGTGAAACTGTGA 59.888 61.111 2.18 0.00 36.74 3.58
463 464 3.353836 CGGCCGGGTGAAACTGTG 61.354 66.667 20.10 0.00 36.74 3.66
464 465 4.636435 CCGGCCGGGTGAAACTGT 62.636 66.667 37.42 0.00 36.74 3.55
482 483 1.103398 CGAATGGGATGCCAACCCTC 61.103 60.000 11.10 4.05 46.82 4.30
486 487 1.392589 ATCACGAATGGGATGCCAAC 58.607 50.000 11.10 6.89 0.00 3.77
525 528 3.554692 GCACACGGCCGAATCGAG 61.555 66.667 35.90 16.03 36.11 4.04
540 543 4.132336 GAGGACATGCATGATAGAAAGCA 58.868 43.478 32.75 0.00 41.73 3.91
541 544 4.387598 AGAGGACATGCATGATAGAAAGC 58.612 43.478 32.75 12.55 0.00 3.51
542 545 6.289834 AGAAGAGGACATGCATGATAGAAAG 58.710 40.000 32.75 4.14 0.00 2.62
543 546 6.099413 AGAGAAGAGGACATGCATGATAGAAA 59.901 38.462 32.75 0.00 0.00 2.52
544 547 5.601729 AGAGAAGAGGACATGCATGATAGAA 59.398 40.000 32.75 0.00 0.00 2.10
545 548 5.146298 AGAGAAGAGGACATGCATGATAGA 58.854 41.667 32.75 0.00 0.00 1.98
546 549 5.471556 AGAGAAGAGGACATGCATGATAG 57.528 43.478 32.75 6.97 0.00 2.08
547 550 5.883685 AAGAGAAGAGGACATGCATGATA 57.116 39.130 32.75 0.00 0.00 2.15
548 551 4.774660 AAGAGAAGAGGACATGCATGAT 57.225 40.909 32.75 17.47 0.00 2.45
549 552 4.564782 AAAGAGAAGAGGACATGCATGA 57.435 40.909 32.75 0.00 0.00 3.07
550 553 4.458295 ACAAAAGAGAAGAGGACATGCATG 59.542 41.667 25.09 25.09 0.00 4.06
551 554 4.458295 CACAAAAGAGAAGAGGACATGCAT 59.542 41.667 0.00 0.00 0.00 3.96
559 562 4.697514 TCAGTCACACAAAAGAGAAGAGG 58.302 43.478 0.00 0.00 0.00 3.69
567 570 4.271049 ACGTTCTCATCAGTCACACAAAAG 59.729 41.667 0.00 0.00 0.00 2.27
570 573 3.452755 ACGTTCTCATCAGTCACACAA 57.547 42.857 0.00 0.00 0.00 3.33
579 582 4.039973 AGGTCCACTTTTACGTTCTCATCA 59.960 41.667 0.00 0.00 0.00 3.07
581 584 4.315803 CAGGTCCACTTTTACGTTCTCAT 58.684 43.478 0.00 0.00 0.00 2.90
582 585 3.724374 CAGGTCCACTTTTACGTTCTCA 58.276 45.455 0.00 0.00 0.00 3.27
583 586 2.479275 GCAGGTCCACTTTTACGTTCTC 59.521 50.000 0.00 0.00 0.00 2.87
584 587 2.490991 GCAGGTCCACTTTTACGTTCT 58.509 47.619 0.00 0.00 0.00 3.01
600 603 5.237779 TCCACTTTTACTTTCTTTACGCAGG 59.762 40.000 0.00 0.00 0.00 4.85
603 606 5.135330 CGTCCACTTTTACTTTCTTTACGC 58.865 41.667 0.00 0.00 0.00 4.42
606 609 5.463061 CGGACGTCCACTTTTACTTTCTTTA 59.537 40.000 32.80 0.00 35.14 1.85
607 610 4.271776 CGGACGTCCACTTTTACTTTCTTT 59.728 41.667 32.80 0.00 35.14 2.52
608 611 3.805971 CGGACGTCCACTTTTACTTTCTT 59.194 43.478 32.80 0.00 35.14 2.52
609 612 3.387397 CGGACGTCCACTTTTACTTTCT 58.613 45.455 32.80 0.00 35.14 2.52
610 613 2.096565 GCGGACGTCCACTTTTACTTTC 60.097 50.000 32.80 2.50 35.14 2.62
611 614 1.869132 GCGGACGTCCACTTTTACTTT 59.131 47.619 32.80 0.00 35.14 2.66
612 615 1.505425 GCGGACGTCCACTTTTACTT 58.495 50.000 32.80 0.00 35.14 2.24
613 616 0.665369 CGCGGACGTCCACTTTTACT 60.665 55.000 32.80 0.00 35.14 2.24
614 617 1.777199 CGCGGACGTCCACTTTTAC 59.223 57.895 32.80 12.14 35.14 2.01
615 618 4.248402 CGCGGACGTCCACTTTTA 57.752 55.556 32.80 0.00 35.14 1.52
656 659 5.104259 ACCTTTCTCTCTCTCTCTCTCTC 57.896 47.826 0.00 0.00 0.00 3.20
662 665 6.202188 CGATACAGTACCTTTCTCTCTCTCTC 59.798 46.154 0.00 0.00 0.00 3.20
666 669 5.124645 TCCGATACAGTACCTTTCTCTCTC 58.875 45.833 0.00 0.00 0.00 3.20
668 671 6.394025 AATCCGATACAGTACCTTTCTCTC 57.606 41.667 0.00 0.00 0.00 3.20
670 673 6.636044 CGTTAATCCGATACAGTACCTTTCTC 59.364 42.308 0.00 0.00 0.00 2.87
676 679 4.234530 AGCGTTAATCCGATACAGTACC 57.765 45.455 0.00 0.00 0.00 3.34
678 681 4.098349 ACCAAGCGTTAATCCGATACAGTA 59.902 41.667 0.00 0.00 0.00 2.74
679 682 3.118884 ACCAAGCGTTAATCCGATACAGT 60.119 43.478 0.00 0.00 0.00 3.55
680 683 3.245284 CACCAAGCGTTAATCCGATACAG 59.755 47.826 0.00 0.00 0.00 2.74
681 684 3.191669 CACCAAGCGTTAATCCGATACA 58.808 45.455 0.00 0.00 0.00 2.29
703 708 3.250744 GCTGTTGTCGTTAGCACTATCA 58.749 45.455 0.00 0.00 37.40 2.15
1098 1738 2.112190 TGGTACTGGTGTGAAGTGTGA 58.888 47.619 0.00 0.00 0.00 3.58
1101 1742 1.873591 GCTTGGTACTGGTGTGAAGTG 59.126 52.381 0.00 0.00 0.00 3.16
1102 1743 1.488812 TGCTTGGTACTGGTGTGAAGT 59.511 47.619 0.00 0.00 0.00 3.01
1103 1744 2.254546 TGCTTGGTACTGGTGTGAAG 57.745 50.000 0.00 0.00 0.00 3.02
1104 1745 2.571212 CTTGCTTGGTACTGGTGTGAA 58.429 47.619 0.00 0.00 0.00 3.18
1105 1746 1.202758 CCTTGCTTGGTACTGGTGTGA 60.203 52.381 0.00 0.00 0.00 3.58
1204 3316 2.124819 ATGAGCCGAAGCAGCTGG 60.125 61.111 17.12 0.00 41.75 4.85
1297 3409 3.588817 TACCTGAACTCCCCCGCGA 62.589 63.158 8.23 0.00 0.00 5.87
1479 3591 1.912110 GACGTTTGCTGCTACTACGAG 59.088 52.381 13.54 0.00 36.21 4.18
1504 3616 6.919721 AGAGACAGAAGCTACAGAAAGTTAG 58.080 40.000 0.00 0.00 0.00 2.34
1512 3624 5.581126 AATCAGAGAGACAGAAGCTACAG 57.419 43.478 0.00 0.00 0.00 2.74
1667 3849 6.909357 GCAATGAGAATCGATGGAACTTTAAG 59.091 38.462 0.00 0.00 38.61 1.85
1672 3854 3.877559 TGCAATGAGAATCGATGGAACT 58.122 40.909 0.00 0.00 38.61 3.01
1715 7398 2.447047 ACCAAACCAATTCCTCACCTCT 59.553 45.455 0.00 0.00 0.00 3.69
1719 7402 1.539827 CCGACCAAACCAATTCCTCAC 59.460 52.381 0.00 0.00 0.00 3.51
1753 7464 5.296780 TGAAACTTCCTTCACAGTTCATCAC 59.703 40.000 0.00 0.00 31.79 3.06
1857 7589 8.522542 TTTACCCACTTACTGTTTGTACATTT 57.477 30.769 0.00 0.00 32.86 2.32
1858 7590 8.522542 TTTTACCCACTTACTGTTTGTACATT 57.477 30.769 0.00 0.00 32.86 2.71
1873 11271 0.539669 GCAGCACCCTTTTACCCACT 60.540 55.000 0.00 0.00 0.00 4.00
1914 11320 3.383185 TGGTTGGTTGGACATTTTGACTC 59.617 43.478 0.00 0.00 0.00 3.36
1924 11330 0.454196 GTGTGTGTGGTTGGTTGGAC 59.546 55.000 0.00 0.00 0.00 4.02
1951 11363 5.068234 TGGTTCTTCTTCATATTCGTCGT 57.932 39.130 0.00 0.00 0.00 4.34
1952 11364 4.504461 CCTGGTTCTTCTTCATATTCGTCG 59.496 45.833 0.00 0.00 0.00 5.12
1953 11365 5.420409 ACCTGGTTCTTCTTCATATTCGTC 58.580 41.667 0.00 0.00 0.00 4.20
1983 11395 2.317609 CCCGTGAGCCGTGACAAAG 61.318 63.158 0.00 0.00 33.66 2.77
2019 11431 3.366374 GGAAGTGCGGAGGAAGATTTTTG 60.366 47.826 0.00 0.00 0.00 2.44
2033 11445 2.426522 TCTGAAAGAATGGGAAGTGCG 58.573 47.619 0.00 0.00 42.31 5.34
2061 11490 1.125021 GAATGCTATCGCGATTCACGG 59.875 52.381 28.81 13.10 42.83 4.94
2062 11491 1.786579 TGAATGCTATCGCGATTCACG 59.213 47.619 28.81 14.11 38.03 4.35
2064 11493 3.302415 CGTTTGAATGCTATCGCGATTCA 60.302 43.478 28.81 23.94 39.54 2.57
2073 16076 6.856938 GTCGTATAGTCTCGTTTGAATGCTAT 59.143 38.462 0.00 0.00 0.00 2.97
2220 16227 3.786635 AGCGAGGCTTTGTAAGTCTATG 58.213 45.455 0.00 0.00 45.06 2.23
2273 17072 0.620556 GAAGGGATGTCAGGCCTTCA 59.379 55.000 0.00 6.13 37.43 3.02
2275 17074 0.915364 GAGAAGGGATGTCAGGCCTT 59.085 55.000 0.00 0.00 0.00 4.35
2283 17082 1.079819 CGCACGTGAGAAGGGATGT 60.080 57.895 22.23 0.00 0.00 3.06
2314 18345 2.357517 AGCCGCTGTCCAAGTTCG 60.358 61.111 0.00 0.00 0.00 3.95
2351 18382 1.230324 GAGTGAAGTGAGTGGGTTGC 58.770 55.000 0.00 0.00 0.00 4.17
2363 18394 2.165437 GGAGCTACAGAGGTGAGTGAAG 59.835 54.545 0.00 0.00 32.11 3.02
2377 18408 1.476477 AGAAGAAGGGACGGAGCTAC 58.524 55.000 0.00 0.00 0.00 3.58
2397 18428 4.568072 TTCGATCCAAATCAAAGAGGGA 57.432 40.909 0.00 0.00 31.76 4.20
2433 18464 2.125552 TGGAGCGCAACATCCTCG 60.126 61.111 11.47 0.00 36.50 4.63
2436 19578 2.334946 TTGCTGGAGCGCAACATCC 61.335 57.895 11.47 8.55 44.30 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.