Multiple sequence alignment - TraesCS7B01G423100

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G423100 chr7B 100.000 5198 0 0 1 5198 692600025 692605222 0.000000e+00 9600.0
1 TraesCS7B01G423100 chr7B 92.079 303 23 1 2 304 107755237 107755538 4.810000e-115 425.0
2 TraesCS7B01G423100 chr7B 92.079 303 22 1 2 304 594583071 594583371 4.810000e-115 425.0
3 TraesCS7B01G423100 chr7B 87.879 66 5 3 577 640 458790768 458790704 2.010000e-09 75.0
4 TraesCS7B01G423100 chr5B 98.784 3126 26 6 1153 4273 14676026 14672908 0.000000e+00 5552.0
5 TraesCS7B01G423100 chr5B 97.919 3124 26 8 1153 4273 624698055 624694968 0.000000e+00 5373.0
6 TraesCS7B01G423100 chr5B 98.704 2777 24 5 1499 4273 628283778 628281012 0.000000e+00 4918.0
7 TraesCS7B01G423100 chr5B 98.266 346 4 1 1153 1496 628284476 628284131 5.760000e-169 604.0
8 TraesCS7B01G423100 chr5B 92.157 306 23 1 2 307 691520517 691520213 1.030000e-116 431.0
9 TraesCS7B01G423100 chr5B 90.764 314 26 3 1 313 683512974 683512663 2.900000e-112 416.0
10 TraesCS7B01G423100 chr5A 98.751 3123 28 5 1153 4273 181402802 181399689 0.000000e+00 5541.0
11 TraesCS7B01G423100 chr5A 99.338 151 1 0 4827 4977 39844545 39844695 1.840000e-69 274.0
12 TraesCS7B01G423100 chr1B 98.718 3121 31 4 1154 4273 172892558 172895670 0.000000e+00 5533.0
13 TraesCS7B01G423100 chr1B 98.598 1641 23 0 1150 2790 72065304 72066944 0.000000e+00 2904.0
14 TraesCS7B01G423100 chr1B 98.048 1076 13 4 3198 4273 72075695 72076762 0.000000e+00 1864.0
15 TraesCS7B01G423100 chr1B 98.024 253 2 1 2953 3202 72066961 72067213 2.220000e-118 436.0
16 TraesCS7B01G423100 chr1B 91.830 306 21 3 1 306 108835537 108835236 1.730000e-114 424.0
17 TraesCS7B01G423100 chr1B 100.000 150 0 0 4828 4977 229961359 229961508 1.430000e-70 278.0
18 TraesCS7B01G423100 chr1B 88.983 236 4 6 990 1207 623486914 623486683 6.630000e-69 272.0
19 TraesCS7B01G423100 chr7A 98.679 2347 20 6 1931 4273 710788807 710791146 0.000000e+00 4152.0
20 TraesCS7B01G423100 chr7A 87.636 1383 78 42 951 2294 699290838 699292166 0.000000e+00 1520.0
21 TraesCS7B01G423100 chr7A 84.945 910 84 23 2423 3289 699292350 699293249 0.000000e+00 872.0
22 TraesCS7B01G423100 chr7A 83.607 244 14 13 738 955 699290574 699290817 6.820000e-49 206.0
23 TraesCS7B01G423100 chr7A 86.982 169 12 6 5014 5178 699295256 699295418 1.150000e-41 182.0
24 TraesCS7B01G423100 chr3A 99.151 1532 12 1 1153 2684 625560492 625558962 0.000000e+00 2756.0
25 TraesCS7B01G423100 chr3A 98.698 1383 11 5 2893 4273 625558965 625557588 0.000000e+00 2447.0
26 TraesCS7B01G423100 chr7D 87.179 2301 176 64 2367 4631 607046871 607044654 0.000000e+00 2505.0
27 TraesCS7B01G423100 chr7D 88.443 1644 75 47 738 2309 607048741 607047141 0.000000e+00 1877.0
28 TraesCS7B01G423100 chr7D 86.158 838 47 28 899 1689 561634623 561633808 0.000000e+00 841.0
29 TraesCS7B01G423100 chr7D 93.467 199 13 0 303 501 607049851 607049653 3.940000e-76 296.0
30 TraesCS7B01G423100 chr7D 81.675 191 16 9 5014 5198 607043957 607043780 1.950000e-29 141.0
31 TraesCS7B01G423100 chr3B 83.676 778 57 39 813 1544 826119746 826120499 0.000000e+00 669.0
32 TraesCS7B01G423100 chr3B 92.434 304 20 3 2 304 798097112 798097413 1.030000e-116 431.0
33 TraesCS7B01G423100 chr3B 91.503 306 25 1 2 307 803950286 803950590 2.240000e-113 420.0
34 TraesCS7B01G423100 chr3B 78.507 777 64 48 820 1544 185525191 185525916 1.040000e-111 414.0
35 TraesCS7B01G423100 chr3B 97.590 166 1 3 4812 4977 127316197 127316359 1.100000e-71 281.0
36 TraesCS7B01G423100 chr6B 87.413 572 29 17 994 1544 525983356 525982807 7.400000e-173 617.0
37 TraesCS7B01G423100 chr4B 92.484 306 22 1 2 307 568451688 568451384 2.220000e-118 436.0
38 TraesCS7B01G423100 chr2B 92.508 307 19 4 2 307 42970385 42970688 2.220000e-118 436.0
39 TraesCS7B01G423100 chr2B 100.000 150 0 0 4827 4976 28630304 28630155 1.430000e-70 278.0
40 TraesCS7B01G423100 chr2B 99.329 149 1 0 4828 4976 100085534 100085682 2.390000e-68 270.0
41 TraesCS7B01G423100 chr1A 99.338 151 1 0 4826 4976 28715621 28715471 1.840000e-69 274.0
42 TraesCS7B01G423100 chr2A 99.329 149 1 0 4828 4976 686246140 686245992 2.390000e-68 270.0
43 TraesCS7B01G423100 chr2A 98.658 149 2 0 4828 4976 477130010 477130158 1.110000e-66 265.0
44 TraesCS7B01G423100 chr4A 97.403 154 4 0 4823 4976 129096309 129096462 3.990000e-66 263.0
45 TraesCS7B01G423100 chr2D 93.478 46 2 1 585 630 642030913 642030957 3.360000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G423100 chr7B 692600025 692605222 5197 False 9600.00 9600 100.0000 1 5198 1 chr7B.!!$F3 5197
1 TraesCS7B01G423100 chr5B 14672908 14676026 3118 True 5552.00 5552 98.7840 1153 4273 1 chr5B.!!$R1 3120
2 TraesCS7B01G423100 chr5B 624694968 624698055 3087 True 5373.00 5373 97.9190 1153 4273 1 chr5B.!!$R2 3120
3 TraesCS7B01G423100 chr5B 628281012 628284476 3464 True 2761.00 4918 98.4850 1153 4273 2 chr5B.!!$R5 3120
4 TraesCS7B01G423100 chr5A 181399689 181402802 3113 True 5541.00 5541 98.7510 1153 4273 1 chr5A.!!$R1 3120
5 TraesCS7B01G423100 chr1B 172892558 172895670 3112 False 5533.00 5533 98.7180 1154 4273 1 chr1B.!!$F2 3119
6 TraesCS7B01G423100 chr1B 72075695 72076762 1067 False 1864.00 1864 98.0480 3198 4273 1 chr1B.!!$F1 1075
7 TraesCS7B01G423100 chr1B 72065304 72067213 1909 False 1670.00 2904 98.3110 1150 3202 2 chr1B.!!$F4 2052
8 TraesCS7B01G423100 chr7A 710788807 710791146 2339 False 4152.00 4152 98.6790 1931 4273 1 chr7A.!!$F1 2342
9 TraesCS7B01G423100 chr7A 699290574 699295418 4844 False 695.00 1520 85.7925 738 5178 4 chr7A.!!$F2 4440
10 TraesCS7B01G423100 chr3A 625557588 625560492 2904 True 2601.50 2756 98.9245 1153 4273 2 chr3A.!!$R1 3120
11 TraesCS7B01G423100 chr7D 607043780 607049851 6071 True 1204.75 2505 87.6910 303 5198 4 chr7D.!!$R2 4895
12 TraesCS7B01G423100 chr7D 561633808 561634623 815 True 841.00 841 86.1580 899 1689 1 chr7D.!!$R1 790
13 TraesCS7B01G423100 chr3B 826119746 826120499 753 False 669.00 669 83.6760 813 1544 1 chr3B.!!$F5 731
14 TraesCS7B01G423100 chr3B 185525191 185525916 725 False 414.00 414 78.5070 820 1544 1 chr3B.!!$F2 724
15 TraesCS7B01G423100 chr6B 525982807 525983356 549 True 617.00 617 87.4130 994 1544 1 chr6B.!!$R1 550

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
145 146 0.029834 CAGAACATGCATAAGCCGGC 59.970 55.0 21.89 21.89 41.13 6.13 F
905 1624 0.104304 CTACACCTACACCCATCCGC 59.896 60.0 0.00 0.00 0.00 5.54 F
2190 3393 7.393841 AGAGGTTGATAGTCACAGTAAGTAC 57.606 40.0 0.00 0.00 0.00 2.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2190 3393 1.598962 CGCCCCTCATGTAGCATGG 60.599 63.158 8.95 1.23 0.0 3.66 R
3248 4841 6.006275 TCCAGGCTTAATCTTGCTCTATTT 57.994 37.500 0.00 0.00 0.0 1.40 R
4512 6201 0.248825 GGCAACGCAACACACAATCA 60.249 50.000 0.00 0.00 0.0 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.927675 TTTTGGTTTTACTATTCTAGCCAAGA 57.072 30.769 0.00 0.00 36.33 3.02
26 27 9.528489 TTTTGGTTTTACTATTCTAGCCAAGAT 57.472 29.630 0.00 0.00 36.33 2.40
27 28 9.528489 TTTGGTTTTACTATTCTAGCCAAGATT 57.472 29.630 0.00 0.00 36.33 2.40
28 29 9.528489 TTGGTTTTACTATTCTAGCCAAGATTT 57.472 29.630 0.00 0.00 33.05 2.17
29 30 8.956426 TGGTTTTACTATTCTAGCCAAGATTTG 58.044 33.333 0.00 0.00 33.05 2.32
30 31 9.174166 GGTTTTACTATTCTAGCCAAGATTTGA 57.826 33.333 0.00 0.00 33.05 2.69
64 65 7.692908 TTGTATCTAAAGTTGTTGCAAAAGC 57.307 32.000 0.00 0.00 0.00 3.51
65 66 6.800543 TGTATCTAAAGTTGTTGCAAAAGCA 58.199 32.000 0.00 0.00 0.00 3.91
66 67 7.261325 TGTATCTAAAGTTGTTGCAAAAGCAA 58.739 30.769 0.00 0.00 0.00 3.91
67 68 7.761704 TGTATCTAAAGTTGTTGCAAAAGCAAA 59.238 29.630 0.00 0.00 0.00 3.68
68 69 7.790823 ATCTAAAGTTGTTGCAAAAGCAAAT 57.209 28.000 0.00 0.00 0.00 2.32
69 70 8.885494 ATCTAAAGTTGTTGCAAAAGCAAATA 57.115 26.923 0.00 0.00 0.00 1.40
70 71 8.709386 TCTAAAGTTGTTGCAAAAGCAAATAA 57.291 26.923 0.00 1.34 0.00 1.40
71 72 9.155975 TCTAAAGTTGTTGCAAAAGCAAATAAA 57.844 25.926 0.00 0.00 0.00 1.40
72 73 9.766277 CTAAAGTTGTTGCAAAAGCAAATAAAA 57.234 25.926 0.00 0.00 0.00 1.52
73 74 8.672214 AAAGTTGTTGCAAAAGCAAATAAAAG 57.328 26.923 0.00 0.00 0.00 2.27
74 75 6.257423 AGTTGTTGCAAAAGCAAATAAAAGC 58.743 32.000 0.00 0.00 0.00 3.51
75 76 5.808042 TGTTGCAAAAGCAAATAAAAGCA 57.192 30.435 0.00 0.00 0.00 3.91
76 77 6.374565 TGTTGCAAAAGCAAATAAAAGCAT 57.625 29.167 0.00 0.00 0.00 3.79
77 78 6.793349 TGTTGCAAAAGCAAATAAAAGCATT 58.207 28.000 0.00 0.00 0.00 3.56
78 79 7.923888 TGTTGCAAAAGCAAATAAAAGCATTA 58.076 26.923 0.00 0.00 0.00 1.90
79 80 8.566260 TGTTGCAAAAGCAAATAAAAGCATTAT 58.434 25.926 0.00 0.00 0.00 1.28
80 81 8.842777 GTTGCAAAAGCAAATAAAAGCATTATG 58.157 29.630 0.00 0.00 0.00 1.90
81 82 8.320396 TGCAAAAGCAAATAAAAGCATTATGA 57.680 26.923 0.00 0.00 0.00 2.15
82 83 8.948145 TGCAAAAGCAAATAAAAGCATTATGAT 58.052 25.926 0.00 0.00 0.00 2.45
104 105 9.712305 ATGATAGATCAATCTAAGTTTTACGGG 57.288 33.333 3.94 0.00 42.20 5.28
105 106 8.701895 TGATAGATCAATCTAAGTTTTACGGGT 58.298 33.333 3.94 0.00 42.20 5.28
106 107 9.194271 GATAGATCAATCTAAGTTTTACGGGTC 57.806 37.037 3.94 0.00 42.20 4.46
107 108 6.040878 AGATCAATCTAAGTTTTACGGGTCG 58.959 40.000 0.00 0.00 34.85 4.79
108 109 4.497300 TCAATCTAAGTTTTACGGGTCGG 58.503 43.478 0.00 0.00 0.00 4.79
109 110 3.531934 ATCTAAGTTTTACGGGTCGGG 57.468 47.619 0.00 0.00 0.00 5.14
110 111 2.524306 TCTAAGTTTTACGGGTCGGGA 58.476 47.619 0.00 0.00 0.00 5.14
111 112 2.231235 TCTAAGTTTTACGGGTCGGGAC 59.769 50.000 0.00 0.00 0.00 4.46
124 125 3.366629 GGGACGAGCTGTGTCAGA 58.633 61.111 15.47 0.00 38.10 3.27
125 126 1.893786 GGGACGAGCTGTGTCAGAT 59.106 57.895 15.47 0.00 38.10 2.90
126 127 0.179124 GGGACGAGCTGTGTCAGATC 60.179 60.000 15.47 5.14 42.60 2.75
127 128 0.528017 GGACGAGCTGTGTCAGATCA 59.472 55.000 15.47 0.00 45.80 2.92
128 129 1.468908 GGACGAGCTGTGTCAGATCAG 60.469 57.143 15.47 9.45 45.80 2.90
129 130 1.470494 GACGAGCTGTGTCAGATCAGA 59.530 52.381 13.87 0.00 45.80 3.27
130 131 1.889170 ACGAGCTGTGTCAGATCAGAA 59.111 47.619 13.87 0.00 45.80 3.02
131 132 2.257894 CGAGCTGTGTCAGATCAGAAC 58.742 52.381 13.87 0.00 45.80 3.01
132 133 2.352127 CGAGCTGTGTCAGATCAGAACA 60.352 50.000 13.87 0.00 45.80 3.18
133 134 3.675502 CGAGCTGTGTCAGATCAGAACAT 60.676 47.826 13.87 0.00 45.80 2.71
134 135 3.597255 AGCTGTGTCAGATCAGAACATG 58.403 45.455 9.03 0.00 32.44 3.21
135 136 2.095532 GCTGTGTCAGATCAGAACATGC 59.904 50.000 9.03 2.18 32.44 4.06
136 137 3.332034 CTGTGTCAGATCAGAACATGCA 58.668 45.455 0.00 0.00 32.44 3.96
137 138 3.939592 CTGTGTCAGATCAGAACATGCAT 59.060 43.478 0.00 0.00 32.44 3.96
138 139 5.088680 TGTGTCAGATCAGAACATGCATA 57.911 39.130 0.00 0.00 0.00 3.14
139 140 5.490159 TGTGTCAGATCAGAACATGCATAA 58.510 37.500 0.00 0.00 0.00 1.90
140 141 5.583457 TGTGTCAGATCAGAACATGCATAAG 59.417 40.000 0.00 0.00 0.00 1.73
141 142 4.573607 TGTCAGATCAGAACATGCATAAGC 59.426 41.667 0.00 0.00 42.57 3.09
142 143 4.024218 GTCAGATCAGAACATGCATAAGCC 60.024 45.833 0.00 0.00 41.13 4.35
143 144 3.059120 CAGATCAGAACATGCATAAGCCG 60.059 47.826 0.00 0.00 41.13 5.52
144 145 1.667236 TCAGAACATGCATAAGCCGG 58.333 50.000 0.00 0.00 41.13 6.13
145 146 0.029834 CAGAACATGCATAAGCCGGC 59.970 55.000 21.89 21.89 41.13 6.13
146 147 1.103398 AGAACATGCATAAGCCGGCC 61.103 55.000 26.15 7.94 41.13 6.13
147 148 2.075426 GAACATGCATAAGCCGGCCC 62.075 60.000 26.15 7.28 41.13 5.80
148 149 3.663176 CATGCATAAGCCGGCCCG 61.663 66.667 26.15 10.47 41.13 6.13
149 150 4.189580 ATGCATAAGCCGGCCCGT 62.190 61.111 26.15 11.92 41.13 5.28
150 151 2.813726 ATGCATAAGCCGGCCCGTA 61.814 57.895 26.15 14.01 41.13 4.02
151 152 2.203098 GCATAAGCCGGCCCGTAA 60.203 61.111 26.15 4.27 33.58 3.18
152 153 1.820481 GCATAAGCCGGCCCGTAAA 60.820 57.895 26.15 2.16 33.58 2.01
153 154 1.378124 GCATAAGCCGGCCCGTAAAA 61.378 55.000 26.15 0.50 33.58 1.52
154 155 1.096416 CATAAGCCGGCCCGTAAAAA 58.904 50.000 26.15 0.00 0.00 1.94
178 179 8.603242 AAAAGTATATTCCGCGAATATGTTCT 57.397 30.769 22.74 17.34 42.79 3.01
179 180 8.603242 AAAGTATATTCCGCGAATATGTTCTT 57.397 30.769 22.74 20.02 42.79 2.52
180 181 8.603242 AAGTATATTCCGCGAATATGTTCTTT 57.397 30.769 22.74 12.69 42.79 2.52
181 182 8.603242 AGTATATTCCGCGAATATGTTCTTTT 57.397 30.769 22.74 7.50 42.79 2.27
182 183 9.701098 AGTATATTCCGCGAATATGTTCTTTTA 57.299 29.630 22.74 7.51 42.79 1.52
185 186 5.666969 TCCGCGAATATGTTCTTTTATGG 57.333 39.130 8.23 0.00 32.00 2.74
186 187 4.513692 TCCGCGAATATGTTCTTTTATGGG 59.486 41.667 8.23 0.00 32.00 4.00
187 188 4.274950 CCGCGAATATGTTCTTTTATGGGT 59.725 41.667 8.23 0.00 32.00 4.51
188 189 5.440685 CGCGAATATGTTCTTTTATGGGTC 58.559 41.667 0.00 0.00 32.00 4.46
189 190 5.560183 CGCGAATATGTTCTTTTATGGGTCC 60.560 44.000 0.00 0.00 32.00 4.46
190 191 5.298276 GCGAATATGTTCTTTTATGGGTCCA 59.702 40.000 0.46 0.00 32.00 4.02
191 192 6.016276 GCGAATATGTTCTTTTATGGGTCCAT 60.016 38.462 7.70 7.70 35.11 3.41
192 193 7.470009 GCGAATATGTTCTTTTATGGGTCCATT 60.470 37.037 7.89 0.00 33.87 3.16
193 194 9.062524 CGAATATGTTCTTTTATGGGTCCATTA 57.937 33.333 7.89 0.00 33.87 1.90
196 197 6.463995 TGTTCTTTTATGGGTCCATTATGC 57.536 37.500 7.89 0.00 37.82 3.14
197 198 5.067153 TGTTCTTTTATGGGTCCATTATGCG 59.933 40.000 7.89 0.00 37.82 4.73
198 199 4.141287 TCTTTTATGGGTCCATTATGCGG 58.859 43.478 7.89 0.00 37.82 5.69
199 200 2.577606 TTATGGGTCCATTATGCGGG 57.422 50.000 7.89 0.00 37.82 6.13
200 201 0.695924 TATGGGTCCATTATGCGGGG 59.304 55.000 7.89 0.00 37.82 5.73
201 202 1.360393 ATGGGTCCATTATGCGGGGT 61.360 55.000 0.00 0.00 31.82 4.95
202 203 1.228154 GGGTCCATTATGCGGGGTC 60.228 63.158 0.00 0.00 0.00 4.46
203 204 1.705997 GGGTCCATTATGCGGGGTCT 61.706 60.000 0.00 0.00 0.00 3.85
204 205 0.535102 GGTCCATTATGCGGGGTCTG 60.535 60.000 0.00 0.00 0.00 3.51
205 206 1.148273 TCCATTATGCGGGGTCTGC 59.852 57.895 0.00 0.00 0.00 4.26
238 239 3.700970 CGCCGGCCCCCAAAAATT 61.701 61.111 23.46 0.00 0.00 1.82
239 240 2.046411 GCCGGCCCCCAAAAATTG 60.046 61.111 18.11 0.00 0.00 2.32
240 241 2.889606 GCCGGCCCCCAAAAATTGT 61.890 57.895 18.11 0.00 0.00 2.71
241 242 1.757949 CCGGCCCCCAAAAATTGTT 59.242 52.632 0.00 0.00 0.00 2.83
242 243 0.109532 CCGGCCCCCAAAAATTGTTT 59.890 50.000 0.00 0.00 0.00 2.83
243 244 1.477740 CCGGCCCCCAAAAATTGTTTT 60.478 47.619 0.00 0.00 37.43 2.43
252 253 3.922216 CAAAAATTGTTTTGCGCGAACT 58.078 36.364 21.89 5.50 45.20 3.01
253 254 3.567670 AAAATTGTTTTGCGCGAACTG 57.432 38.095 21.89 0.00 0.00 3.16
254 255 0.852136 AATTGTTTTGCGCGAACTGC 59.148 45.000 21.89 11.77 41.47 4.40
255 256 0.248825 ATTGTTTTGCGCGAACTGCA 60.249 45.000 21.89 13.81 46.97 4.41
261 262 3.674225 TGCGCGAACTGCAAATAAG 57.326 47.368 12.10 0.00 46.97 1.73
262 263 0.871722 TGCGCGAACTGCAAATAAGT 59.128 45.000 12.10 0.00 46.97 2.24
263 264 1.265635 TGCGCGAACTGCAAATAAGTT 59.734 42.857 12.10 0.00 46.97 2.66
264 265 2.480802 TGCGCGAACTGCAAATAAGTTA 59.519 40.909 12.10 0.00 46.97 2.24
265 266 3.126171 TGCGCGAACTGCAAATAAGTTAT 59.874 39.130 12.10 0.00 46.97 1.89
266 267 4.330347 TGCGCGAACTGCAAATAAGTTATA 59.670 37.500 12.10 0.00 46.97 0.98
267 268 4.664851 GCGCGAACTGCAAATAAGTTATAC 59.335 41.667 12.10 0.00 46.97 1.47
268 269 4.890654 CGCGAACTGCAAATAAGTTATACG 59.109 41.667 0.00 0.00 46.97 3.06
269 270 5.195379 GCGAACTGCAAATAAGTTATACGG 58.805 41.667 0.00 0.00 45.45 4.02
270 271 5.734311 CGAACTGCAAATAAGTTATACGGG 58.266 41.667 0.00 0.00 37.98 5.28
271 272 5.292589 CGAACTGCAAATAAGTTATACGGGT 59.707 40.000 0.00 0.00 37.98 5.28
272 273 6.509039 CGAACTGCAAATAAGTTATACGGGTC 60.509 42.308 0.00 2.27 37.98 4.46
273 274 4.807304 ACTGCAAATAAGTTATACGGGTCG 59.193 41.667 0.00 0.00 0.00 4.79
274 275 4.121317 TGCAAATAAGTTATACGGGTCGG 58.879 43.478 0.00 0.00 0.00 4.79
275 276 3.059393 GCAAATAAGTTATACGGGTCGGC 60.059 47.826 0.00 0.00 0.00 5.54
276 277 2.712057 ATAAGTTATACGGGTCGGCG 57.288 50.000 0.00 0.00 0.00 6.46
277 278 0.667993 TAAGTTATACGGGTCGGCGG 59.332 55.000 7.21 0.00 0.00 6.13
278 279 2.019897 AAGTTATACGGGTCGGCGGG 62.020 60.000 7.21 0.00 0.00 6.13
279 280 2.123939 TTATACGGGTCGGCGGGA 60.124 61.111 7.21 0.00 0.00 5.14
280 281 1.531365 TTATACGGGTCGGCGGGAT 60.531 57.895 7.21 0.00 0.00 3.85
281 282 1.808531 TTATACGGGTCGGCGGGATG 61.809 60.000 7.21 0.00 0.00 3.51
300 301 3.450028 CAGGGTCTGCTAGAGTTGC 57.550 57.895 0.00 0.00 0.00 4.17
301 302 0.901124 CAGGGTCTGCTAGAGTTGCT 59.099 55.000 0.00 0.00 0.00 3.91
313 314 2.260822 AGAGTTGCTCTTAGAGGCCAA 58.739 47.619 11.54 4.90 37.60 4.52
359 360 1.543607 TGCATCCGAATTGCAAAGGA 58.456 45.000 19.42 19.42 46.48 3.36
365 366 4.927978 TCCGAATTGCAAAGGAAAAAGA 57.072 36.364 16.21 0.00 0.00 2.52
404 405 4.625972 TTTTGGAACTTCTTCGGAACAC 57.374 40.909 0.00 0.00 0.00 3.32
430 431 0.173935 TCCAGTGTATTACCCGCGTG 59.826 55.000 4.92 0.00 0.00 5.34
472 473 2.259618 CTCTCGTGGTGTTATGAACGG 58.740 52.381 0.00 0.00 36.70 4.44
474 475 2.494471 TCTCGTGGTGTTATGAACGGAT 59.506 45.455 0.00 0.00 36.70 4.18
506 507 5.277857 ACCGACACTATATTAAGCTTGCT 57.722 39.130 9.86 0.00 0.00 3.91
507 508 6.401047 ACCGACACTATATTAAGCTTGCTA 57.599 37.500 9.86 0.44 0.00 3.49
509 510 7.442656 ACCGACACTATATTAAGCTTGCTATT 58.557 34.615 9.86 0.00 0.00 1.73
513 514 9.706691 GACACTATATTAAGCTTGCTATTGGTA 57.293 33.333 9.86 0.00 0.00 3.25
569 693 2.791383 TGTCTTTTCCGCCAACAATG 57.209 45.000 0.00 0.00 0.00 2.82
585 709 2.911928 TGGCACACTTGTCCCGAA 59.088 55.556 0.00 0.00 0.00 4.30
586 710 1.525077 TGGCACACTTGTCCCGAAC 60.525 57.895 0.00 0.00 0.00 3.95
587 711 1.227853 GGCACACTTGTCCCGAACT 60.228 57.895 0.00 0.00 0.00 3.01
588 712 0.818040 GGCACACTTGTCCCGAACTT 60.818 55.000 0.00 0.00 0.00 2.66
590 714 2.215196 GCACACTTGTCCCGAACTTTA 58.785 47.619 0.00 0.00 0.00 1.85
594 726 3.199677 CACTTGTCCCGAACTTTACACA 58.800 45.455 0.00 0.00 0.00 3.72
626 758 2.029290 ACTAGACAACGCTTGTTCCGAT 60.029 45.455 0.00 0.00 45.52 4.18
630 762 3.810941 AGACAACGCTTGTTCCGATAAAA 59.189 39.130 5.14 0.00 45.52 1.52
633 765 6.148150 AGACAACGCTTGTTCCGATAAAATTA 59.852 34.615 5.14 0.00 45.52 1.40
636 768 6.243811 ACGCTTGTTCCGATAAAATTACAA 57.756 33.333 0.00 0.00 0.00 2.41
640 772 9.279904 CGCTTGTTCCGATAAAATTACAATTTA 57.720 29.630 0.56 0.00 37.62 1.40
677 809 9.717892 GAAATAAATCTGGAGTAATTTTCGTCC 57.282 33.333 0.00 0.00 0.00 4.79
678 810 5.796350 AAATCTGGAGTAATTTTCGTCCG 57.204 39.130 0.00 0.00 31.05 4.79
679 811 3.947910 TCTGGAGTAATTTTCGTCCGT 57.052 42.857 0.00 0.00 31.05 4.69
680 812 5.587388 ATCTGGAGTAATTTTCGTCCGTA 57.413 39.130 0.00 0.00 31.05 4.02
681 813 5.587388 TCTGGAGTAATTTTCGTCCGTAT 57.413 39.130 0.00 0.00 31.05 3.06
682 814 5.969423 TCTGGAGTAATTTTCGTCCGTATT 58.031 37.500 0.00 0.00 31.05 1.89
683 815 6.400568 TCTGGAGTAATTTTCGTCCGTATTT 58.599 36.000 0.00 0.00 31.05 1.40
684 816 7.546358 TCTGGAGTAATTTTCGTCCGTATTTA 58.454 34.615 0.00 0.00 31.05 1.40
685 817 8.199449 TCTGGAGTAATTTTCGTCCGTATTTAT 58.801 33.333 0.00 0.00 31.05 1.40
686 818 8.721019 TGGAGTAATTTTCGTCCGTATTTATT 57.279 30.769 0.00 0.00 31.05 1.40
687 819 8.605746 TGGAGTAATTTTCGTCCGTATTTATTG 58.394 33.333 0.00 0.00 31.05 1.90
689 821 8.496707 AGTAATTTTCGTCCGTATTTATTGGT 57.503 30.769 0.00 0.00 0.00 3.67
690 822 8.392612 AGTAATTTTCGTCCGTATTTATTGGTG 58.607 33.333 0.00 0.00 0.00 4.17
693 825 7.664082 TTTTCGTCCGTATTTATTGGTGTTA 57.336 32.000 0.00 0.00 0.00 2.41
694 826 6.645700 TTCGTCCGTATTTATTGGTGTTAC 57.354 37.500 0.00 0.00 0.00 2.50
695 827 5.964758 TCGTCCGTATTTATTGGTGTTACT 58.035 37.500 0.00 0.00 0.00 2.24
696 828 6.035843 TCGTCCGTATTTATTGGTGTTACTC 58.964 40.000 0.00 0.00 0.00 2.59
697 829 5.232838 CGTCCGTATTTATTGGTGTTACTCC 59.767 44.000 0.00 0.00 0.00 3.85
699 831 6.257193 GTCCGTATTTATTGGTGTTACTCCAG 59.743 42.308 6.26 0.00 36.28 3.86
700 832 6.154877 TCCGTATTTATTGGTGTTACTCCAGA 59.845 38.462 6.26 0.00 36.28 3.86
701 833 6.990349 CCGTATTTATTGGTGTTACTCCAGAT 59.010 38.462 6.26 6.38 36.28 2.90
702 834 7.497909 CCGTATTTATTGGTGTTACTCCAGATT 59.502 37.037 6.26 0.00 36.28 2.40
703 835 8.889717 CGTATTTATTGGTGTTACTCCAGATTT 58.110 33.333 6.26 0.00 36.28 2.17
711 843 8.934023 TGGTGTTACTCCAGATTTATTTTTCT 57.066 30.769 1.62 0.00 0.00 2.52
742 1418 2.608268 GTCAGACGAGGTAAAAGCTCC 58.392 52.381 0.00 0.00 39.44 4.70
747 1423 2.494870 GACGAGGTAAAAGCTCCCTGTA 59.505 50.000 0.00 0.00 39.44 2.74
764 1440 1.127397 TGTAGCGACTGTCGTACGAAG 59.873 52.381 28.38 20.03 42.81 3.79
887 1606 1.684734 CCGCCCTACACCTACACCT 60.685 63.158 0.00 0.00 0.00 4.00
888 1607 0.396139 CCGCCCTACACCTACACCTA 60.396 60.000 0.00 0.00 0.00 3.08
889 1608 0.743097 CGCCCTACACCTACACCTAC 59.257 60.000 0.00 0.00 0.00 3.18
890 1609 1.856629 GCCCTACACCTACACCTACA 58.143 55.000 0.00 0.00 0.00 2.74
891 1610 1.479730 GCCCTACACCTACACCTACAC 59.520 57.143 0.00 0.00 0.00 2.90
892 1611 2.105766 CCCTACACCTACACCTACACC 58.894 57.143 0.00 0.00 0.00 4.16
893 1612 2.292061 CCCTACACCTACACCTACACCT 60.292 54.545 0.00 0.00 0.00 4.00
894 1613 3.053395 CCCTACACCTACACCTACACCTA 60.053 52.174 0.00 0.00 0.00 3.08
895 1614 3.950395 CCTACACCTACACCTACACCTAC 59.050 52.174 0.00 0.00 0.00 3.18
896 1615 3.530928 ACACCTACACCTACACCTACA 57.469 47.619 0.00 0.00 0.00 2.74
897 1616 3.160269 ACACCTACACCTACACCTACAC 58.840 50.000 0.00 0.00 0.00 2.90
898 1617 2.494870 CACCTACACCTACACCTACACC 59.505 54.545 0.00 0.00 0.00 4.16
905 1624 0.104304 CTACACCTACACCCATCCGC 59.896 60.000 0.00 0.00 0.00 5.54
2190 3393 7.393841 AGAGGTTGATAGTCACAGTAAGTAC 57.606 40.000 0.00 0.00 0.00 2.73
3351 4965 5.278266 GCCAAGGCAAGACGCAATATAAATA 60.278 40.000 6.14 0.00 45.17 1.40
4301 5972 6.974965 AGGCTTTGATACTGCTATTTATTGC 58.025 36.000 0.00 0.00 0.00 3.56
4325 5997 4.247612 GACGACGTCGGCCGCTAT 62.248 66.667 37.89 18.30 42.67 2.97
4326 5998 3.746409 GACGACGTCGGCCGCTATT 62.746 63.158 37.89 17.54 42.67 1.73
4328 6000 3.022914 GACGTCGGCCGCTATTCG 61.023 66.667 23.51 20.32 41.42 3.34
4353 6025 4.753662 CGTCTCCCCGAGGACCCA 62.754 72.222 0.00 0.00 37.19 4.51
4354 6026 2.284405 GTCTCCCCGAGGACCCAA 60.284 66.667 0.00 0.00 37.19 4.12
4355 6027 2.284405 TCTCCCCGAGGACCCAAC 60.284 66.667 0.00 0.00 37.19 3.77
4356 6028 3.400054 CTCCCCGAGGACCCAACC 61.400 72.222 0.00 0.00 37.19 3.77
4357 6029 4.257810 TCCCCGAGGACCCAACCA 62.258 66.667 0.00 0.00 37.19 3.67
4358 6030 3.015145 CCCCGAGGACCCAACCAT 61.015 66.667 0.00 0.00 33.47 3.55
4360 6032 1.995626 CCCGAGGACCCAACCATCT 60.996 63.158 0.00 0.00 0.00 2.90
4361 6033 1.221840 CCGAGGACCCAACCATCTG 59.778 63.158 0.00 0.00 0.00 2.90
4365 6037 1.073923 GAGGACCCAACCATCTGTGTT 59.926 52.381 0.00 0.00 0.00 3.32
4432 6106 4.503714 AATGGAATTACCCGAGATGTGT 57.496 40.909 0.00 0.00 32.46 3.72
4433 6107 5.623956 AATGGAATTACCCGAGATGTGTA 57.376 39.130 0.00 0.00 32.46 2.90
4434 6108 4.395959 TGGAATTACCCGAGATGTGTAC 57.604 45.455 0.00 0.00 38.00 2.90
4511 6200 0.107897 GTGGTGTGTGTGTCTGTGGA 60.108 55.000 0.00 0.00 0.00 4.02
4512 6201 0.836606 TGGTGTGTGTGTCTGTGGAT 59.163 50.000 0.00 0.00 0.00 3.41
4513 6202 1.229428 GGTGTGTGTGTCTGTGGATG 58.771 55.000 0.00 0.00 0.00 3.51
4514 6203 1.202639 GGTGTGTGTGTCTGTGGATGA 60.203 52.381 0.00 0.00 0.00 2.92
4544 6233 4.947147 TTGCCGTGGGACTGGTGC 62.947 66.667 0.00 0.00 0.00 5.01
4557 6253 0.809636 CTGGTGCAAGTGTCGTGTGA 60.810 55.000 0.00 0.00 0.00 3.58
4558 6254 0.179059 TGGTGCAAGTGTCGTGTGAT 60.179 50.000 0.00 0.00 0.00 3.06
4559 6255 0.235665 GGTGCAAGTGTCGTGTGATG 59.764 55.000 0.00 0.00 0.00 3.07
4560 6256 0.937304 GTGCAAGTGTCGTGTGATGT 59.063 50.000 0.00 0.00 0.00 3.06
4561 6257 0.936600 TGCAAGTGTCGTGTGATGTG 59.063 50.000 0.00 0.00 0.00 3.21
4562 6258 0.235665 GCAAGTGTCGTGTGATGTGG 59.764 55.000 0.00 0.00 0.00 4.17
4563 6259 1.581934 CAAGTGTCGTGTGATGTGGT 58.418 50.000 0.00 0.00 0.00 4.16
4564 6260 2.749776 CAAGTGTCGTGTGATGTGGTA 58.250 47.619 0.00 0.00 0.00 3.25
4565 6261 3.325870 CAAGTGTCGTGTGATGTGGTAT 58.674 45.455 0.00 0.00 0.00 2.73
4566 6262 2.959516 AGTGTCGTGTGATGTGGTATG 58.040 47.619 0.00 0.00 0.00 2.39
4567 6263 2.299013 AGTGTCGTGTGATGTGGTATGT 59.701 45.455 0.00 0.00 0.00 2.29
4568 6264 2.411748 GTGTCGTGTGATGTGGTATGTG 59.588 50.000 0.00 0.00 0.00 3.21
4569 6265 2.036604 TGTCGTGTGATGTGGTATGTGT 59.963 45.455 0.00 0.00 0.00 3.72
4570 6266 3.064207 GTCGTGTGATGTGGTATGTGTT 58.936 45.455 0.00 0.00 0.00 3.32
4571 6267 3.063485 TCGTGTGATGTGGTATGTGTTG 58.937 45.455 0.00 0.00 0.00 3.33
4604 6300 3.493503 GGTGCTGTATATTTGCGTACCTC 59.506 47.826 0.00 0.00 0.00 3.85
4619 6315 3.002042 CGTACCTCTATGTGTACTGACCG 59.998 52.174 0.00 0.00 36.13 4.79
4635 6331 0.306533 ACCGTGATGCGTTGTTTGTC 59.693 50.000 0.00 0.00 39.32 3.18
4640 6336 1.402259 TGATGCGTTGTTTGTCCGTTT 59.598 42.857 0.00 0.00 0.00 3.60
4646 6342 3.904234 GCGTTGTTTGTCCGTTTTATCTC 59.096 43.478 0.00 0.00 0.00 2.75
4650 6346 6.364165 CGTTGTTTGTCCGTTTTATCTCTCTA 59.636 38.462 0.00 0.00 0.00 2.43
4661 6357 9.504710 CCGTTTTATCTCTCTATATATTGTCCG 57.495 37.037 0.00 0.00 0.00 4.79
4669 6506 8.692710 TCTCTCTATATATTGTCCGTTGTTTGT 58.307 33.333 0.00 0.00 0.00 2.83
4670 6507 8.867112 TCTCTATATATTGTCCGTTGTTTGTC 57.133 34.615 0.00 0.00 0.00 3.18
4678 6515 1.368374 CGTTGTTTGTCCGTTCGGC 60.368 57.895 6.35 2.90 0.00 5.54
4679 6516 1.722677 GTTGTTTGTCCGTTCGGCA 59.277 52.632 6.35 5.44 0.00 5.69
4682 6519 1.231958 TGTTTGTCCGTTCGGCATCC 61.232 55.000 6.35 3.28 0.00 3.51
4695 6532 2.821366 CATCCCAGCTGGTGCGTC 60.821 66.667 30.63 0.00 45.42 5.19
4696 6533 4.101448 ATCCCAGCTGGTGCGTCC 62.101 66.667 30.63 0.00 45.42 4.79
4734 6648 1.801309 CGCGGAGAGGAGGAAGATCC 61.801 65.000 0.00 0.00 39.89 3.36
4749 6663 3.860605 TCCGCGATGGACATGGGG 61.861 66.667 8.23 4.73 43.74 4.96
4750 6664 3.860605 CCGCGATGGACATGGGGA 61.861 66.667 8.23 0.00 42.00 4.81
4764 6688 2.818274 GGGATGCACGAACCGGAC 60.818 66.667 9.46 0.00 0.00 4.79
4828 6752 1.441849 GATCCTCTCGCGCAGATCG 60.442 63.158 8.75 3.35 42.12 3.69
4829 6753 1.846849 GATCCTCTCGCGCAGATCGA 61.847 60.000 8.75 8.42 41.67 3.59
4830 6754 1.448119 ATCCTCTCGCGCAGATCGAA 61.448 55.000 8.75 0.00 41.67 3.71
4831 6755 1.226688 CCTCTCGCGCAGATCGAAA 60.227 57.895 8.75 0.00 41.67 3.46
4832 6756 0.802222 CCTCTCGCGCAGATCGAAAA 60.802 55.000 8.75 0.00 41.67 2.29
4833 6757 1.203928 CTCTCGCGCAGATCGAAAAT 58.796 50.000 8.75 0.00 41.67 1.82
4835 6759 2.117137 TCTCGCGCAGATCGAAAATAC 58.883 47.619 8.75 0.00 41.67 1.89
4837 6761 3.002965 TCTCGCGCAGATCGAAAATACTA 59.997 43.478 8.75 0.00 41.67 1.82
4842 6766 4.147306 GCGCAGATCGAAAATACTAGACAG 59.853 45.833 0.30 0.00 41.67 3.51
4844 6768 5.396947 CGCAGATCGAAAATACTAGACAGAC 59.603 44.000 0.00 0.00 41.67 3.51
4845 6769 5.396947 GCAGATCGAAAATACTAGACAGACG 59.603 44.000 0.00 0.00 0.00 4.18
4849 6773 5.625251 TCGAAAATACTAGACAGACGACAC 58.375 41.667 0.00 0.00 0.00 3.67
4850 6774 5.410746 TCGAAAATACTAGACAGACGACACT 59.589 40.000 0.00 0.00 0.00 3.55
4851 6775 5.733572 CGAAAATACTAGACAGACGACACTC 59.266 44.000 0.00 0.00 0.00 3.51
4852 6776 5.564048 AAATACTAGACAGACGACACTCC 57.436 43.478 0.00 0.00 0.00 3.85
4853 6777 2.563261 ACTAGACAGACGACACTCCA 57.437 50.000 0.00 0.00 0.00 3.86
4854 6778 3.074675 ACTAGACAGACGACACTCCAT 57.925 47.619 0.00 0.00 0.00 3.41
4855 6779 2.750166 ACTAGACAGACGACACTCCATG 59.250 50.000 0.00 0.00 0.00 3.66
4856 6780 0.244994 AGACAGACGACACTCCATGC 59.755 55.000 0.00 0.00 0.00 4.06
4857 6781 0.038251 GACAGACGACACTCCATGCA 60.038 55.000 0.00 0.00 0.00 3.96
4858 6782 0.319900 ACAGACGACACTCCATGCAC 60.320 55.000 0.00 0.00 0.00 4.57
4859 6783 1.080501 AGACGACACTCCATGCACG 60.081 57.895 0.00 0.00 37.41 5.34
4860 6784 1.080772 GACGACACTCCATGCACGA 60.081 57.895 0.00 0.00 35.99 4.35
4861 6785 0.458543 GACGACACTCCATGCACGAT 60.459 55.000 0.00 0.00 35.99 3.73
4862 6786 0.737367 ACGACACTCCATGCACGATG 60.737 55.000 0.00 0.00 35.99 3.84
4863 6787 1.717937 GACACTCCATGCACGATGC 59.282 57.895 0.00 0.00 45.29 3.91
4872 6796 2.711311 GCACGATGCATGCACGAT 59.289 55.556 33.63 18.47 44.26 3.73
4873 6797 1.063006 GCACGATGCATGCACGATT 59.937 52.632 33.63 18.14 44.26 3.34
4874 6798 0.523968 GCACGATGCATGCACGATTT 60.524 50.000 33.63 17.81 44.26 2.17
4875 6799 1.267982 GCACGATGCATGCACGATTTA 60.268 47.619 33.63 11.14 44.26 1.40
4876 6800 2.365948 CACGATGCATGCACGATTTAC 58.634 47.619 33.63 16.48 0.00 2.01
4877 6801 2.006169 ACGATGCATGCACGATTTACA 58.994 42.857 33.63 9.81 0.00 2.41
4878 6802 2.418280 ACGATGCATGCACGATTTACAA 59.582 40.909 33.63 9.15 0.00 2.41
4879 6803 3.065233 ACGATGCATGCACGATTTACAAT 59.935 39.130 33.63 14.54 0.00 2.71
4880 6804 3.660813 CGATGCATGCACGATTTACAATC 59.339 43.478 25.37 11.47 0.00 2.67
4881 6805 4.600032 GATGCATGCACGATTTACAATCA 58.400 39.130 25.37 0.00 0.00 2.57
4882 6806 4.018649 TGCATGCACGATTTACAATCAG 57.981 40.909 18.46 0.00 0.00 2.90
4883 6807 3.688673 TGCATGCACGATTTACAATCAGA 59.311 39.130 18.46 0.00 0.00 3.27
4884 6808 4.336153 TGCATGCACGATTTACAATCAGAT 59.664 37.500 18.46 0.00 0.00 2.90
4885 6809 4.673761 GCATGCACGATTTACAATCAGATG 59.326 41.667 14.21 0.00 0.00 2.90
4886 6810 4.880886 TGCACGATTTACAATCAGATGG 57.119 40.909 0.00 0.00 0.00 3.51
4887 6811 4.512484 TGCACGATTTACAATCAGATGGA 58.488 39.130 0.00 0.00 0.00 3.41
4888 6812 5.125356 TGCACGATTTACAATCAGATGGAT 58.875 37.500 0.00 0.00 38.05 3.41
4889 6813 5.007921 TGCACGATTTACAATCAGATGGATG 59.992 40.000 0.00 0.00 36.02 3.51
4890 6814 5.008019 GCACGATTTACAATCAGATGGATGT 59.992 40.000 0.00 0.00 36.02 3.06
4891 6815 6.424683 CACGATTTACAATCAGATGGATGTG 58.575 40.000 0.00 0.00 36.02 3.21
4892 6816 6.258507 CACGATTTACAATCAGATGGATGTGA 59.741 38.462 0.00 0.00 36.02 3.58
4893 6817 6.823182 ACGATTTACAATCAGATGGATGTGAA 59.177 34.615 0.00 0.00 36.02 3.18
4894 6818 7.011763 ACGATTTACAATCAGATGGATGTGAAG 59.988 37.037 0.00 0.00 36.02 3.02
4895 6819 6.441093 TTTACAATCAGATGGATGTGAAGC 57.559 37.500 0.00 0.00 36.02 3.86
4896 6820 3.959293 ACAATCAGATGGATGTGAAGCA 58.041 40.909 0.00 0.00 36.02 3.91
4897 6821 3.693085 ACAATCAGATGGATGTGAAGCAC 59.307 43.478 0.00 0.00 36.02 4.40
4898 6822 3.928005 ATCAGATGGATGTGAAGCACT 57.072 42.857 0.00 0.00 33.56 4.40
4899 6823 3.708403 TCAGATGGATGTGAAGCACTT 57.292 42.857 0.00 0.00 35.11 3.16
4900 6824 4.025040 TCAGATGGATGTGAAGCACTTT 57.975 40.909 0.00 0.00 35.11 2.66
4901 6825 5.164620 TCAGATGGATGTGAAGCACTTTA 57.835 39.130 0.00 0.00 35.11 1.85
4902 6826 5.748402 TCAGATGGATGTGAAGCACTTTAT 58.252 37.500 0.00 0.00 35.11 1.40
4903 6827 6.182627 TCAGATGGATGTGAAGCACTTTATT 58.817 36.000 0.00 0.00 35.11 1.40
4904 6828 6.317140 TCAGATGGATGTGAAGCACTTTATTC 59.683 38.462 0.00 0.00 35.11 1.75
4905 6829 5.591877 AGATGGATGTGAAGCACTTTATTCC 59.408 40.000 0.00 0.00 35.11 3.01
4906 6830 4.016444 TGGATGTGAAGCACTTTATTCCC 58.984 43.478 0.00 0.00 35.11 3.97
4907 6831 4.263905 TGGATGTGAAGCACTTTATTCCCT 60.264 41.667 0.00 0.00 35.11 4.20
4908 6832 4.096984 GGATGTGAAGCACTTTATTCCCTG 59.903 45.833 0.00 0.00 35.11 4.45
4909 6833 4.365514 TGTGAAGCACTTTATTCCCTGA 57.634 40.909 0.00 0.00 35.11 3.86
4910 6834 4.922206 TGTGAAGCACTTTATTCCCTGAT 58.078 39.130 0.00 0.00 35.11 2.90
4911 6835 5.324409 TGTGAAGCACTTTATTCCCTGATT 58.676 37.500 0.00 0.00 35.11 2.57
4912 6836 5.415701 TGTGAAGCACTTTATTCCCTGATTC 59.584 40.000 0.00 0.00 35.11 2.52
4913 6837 5.415701 GTGAAGCACTTTATTCCCTGATTCA 59.584 40.000 0.00 0.00 36.85 2.57
4914 6838 6.009589 TGAAGCACTTTATTCCCTGATTCAA 58.990 36.000 0.00 0.00 36.41 2.69
4915 6839 6.664816 TGAAGCACTTTATTCCCTGATTCAAT 59.335 34.615 0.00 0.00 36.41 2.57
4916 6840 6.461110 AGCACTTTATTCCCTGATTCAATG 57.539 37.500 0.00 0.00 0.00 2.82
4917 6841 5.361857 AGCACTTTATTCCCTGATTCAATGG 59.638 40.000 0.00 0.00 0.00 3.16
4918 6842 5.594926 CACTTTATTCCCTGATTCAATGGC 58.405 41.667 0.00 0.00 0.00 4.40
4919 6843 5.361857 CACTTTATTCCCTGATTCAATGGCT 59.638 40.000 0.00 0.00 0.00 4.75
4920 6844 5.361857 ACTTTATTCCCTGATTCAATGGCTG 59.638 40.000 0.00 0.00 0.00 4.85
4921 6845 2.148446 TTCCCTGATTCAATGGCTGG 57.852 50.000 0.00 0.00 0.00 4.85
4922 6846 1.297968 TCCCTGATTCAATGGCTGGA 58.702 50.000 0.00 0.00 0.00 3.86
4923 6847 1.854939 TCCCTGATTCAATGGCTGGAT 59.145 47.619 0.00 0.00 0.00 3.41
4924 6848 1.961394 CCCTGATTCAATGGCTGGATG 59.039 52.381 0.00 0.00 0.00 3.51
4925 6849 2.662866 CCTGATTCAATGGCTGGATGT 58.337 47.619 0.00 0.00 0.00 3.06
4926 6850 2.361119 CCTGATTCAATGGCTGGATGTG 59.639 50.000 0.00 0.00 0.00 3.21
4927 6851 2.361119 CTGATTCAATGGCTGGATGTGG 59.639 50.000 0.00 0.00 0.00 4.17
4928 6852 2.025131 TGATTCAATGGCTGGATGTGGA 60.025 45.455 0.00 0.00 0.00 4.02
4929 6853 2.133281 TTCAATGGCTGGATGTGGAG 57.867 50.000 0.00 0.00 0.00 3.86
4930 6854 0.394762 TCAATGGCTGGATGTGGAGC 60.395 55.000 0.00 0.00 34.23 4.70
4931 6855 1.452651 AATGGCTGGATGTGGAGCG 60.453 57.895 0.00 0.00 35.95 5.03
4932 6856 2.202236 AATGGCTGGATGTGGAGCGT 62.202 55.000 0.00 0.00 35.95 5.07
4933 6857 2.512515 GGCTGGATGTGGAGCGTC 60.513 66.667 0.00 0.00 35.95 5.19
4934 6858 2.887568 GCTGGATGTGGAGCGTCG 60.888 66.667 0.00 0.00 33.98 5.12
4935 6859 2.573869 CTGGATGTGGAGCGTCGT 59.426 61.111 0.00 0.00 33.98 4.34
4936 6860 1.079819 CTGGATGTGGAGCGTCGTT 60.080 57.895 0.00 0.00 33.98 3.85
4937 6861 1.078759 CTGGATGTGGAGCGTCGTTC 61.079 60.000 0.00 0.00 33.98 3.95
4938 6862 1.080093 GGATGTGGAGCGTCGTTCA 60.080 57.895 11.35 0.00 33.98 3.18
4939 6863 0.460284 GGATGTGGAGCGTCGTTCAT 60.460 55.000 11.35 0.00 33.98 2.57
4940 6864 0.647410 GATGTGGAGCGTCGTTCATG 59.353 55.000 11.35 0.00 0.00 3.07
4941 6865 1.361668 ATGTGGAGCGTCGTTCATGC 61.362 55.000 11.35 1.31 37.27 4.06
4942 6866 2.027073 GTGGAGCGTCGTTCATGCA 61.027 57.895 11.35 0.00 39.85 3.96
4943 6867 1.079197 TGGAGCGTCGTTCATGCAT 60.079 52.632 11.35 0.00 39.85 3.96
4944 6868 1.083806 TGGAGCGTCGTTCATGCATC 61.084 55.000 11.35 0.00 39.85 3.91
4945 6869 1.270968 GAGCGTCGTTCATGCATCG 59.729 57.895 4.01 0.00 39.85 3.84
4946 6870 1.413767 GAGCGTCGTTCATGCATCGT 61.414 55.000 4.01 0.00 39.85 3.73
4947 6871 1.013323 GCGTCGTTCATGCATCGTC 60.013 57.895 0.00 0.00 36.94 4.20
4948 6872 1.631072 CGTCGTTCATGCATCGTCC 59.369 57.895 0.00 0.00 0.00 4.79
4949 6873 1.075979 CGTCGTTCATGCATCGTCCA 61.076 55.000 0.00 0.00 0.00 4.02
4950 6874 1.075542 GTCGTTCATGCATCGTCCAA 58.924 50.000 0.00 0.00 0.00 3.53
4951 6875 1.463056 GTCGTTCATGCATCGTCCAAA 59.537 47.619 0.00 0.00 0.00 3.28
4952 6876 2.095969 GTCGTTCATGCATCGTCCAAAA 60.096 45.455 0.00 0.00 0.00 2.44
4953 6877 2.550180 TCGTTCATGCATCGTCCAAAAA 59.450 40.909 0.00 0.00 0.00 1.94
4954 6878 2.656422 CGTTCATGCATCGTCCAAAAAC 59.344 45.455 0.00 0.00 0.00 2.43
4955 6879 2.610219 TCATGCATCGTCCAAAAACG 57.390 45.000 0.00 0.00 43.92 3.60
4956 6880 1.876799 TCATGCATCGTCCAAAAACGT 59.123 42.857 0.00 0.00 43.08 3.99
4957 6881 2.095969 TCATGCATCGTCCAAAAACGTC 60.096 45.455 0.00 0.00 43.08 4.34
4958 6882 0.233590 TGCATCGTCCAAAAACGTCG 59.766 50.000 0.00 0.00 43.08 5.12
4959 6883 0.233848 GCATCGTCCAAAAACGTCGT 59.766 50.000 0.00 0.00 43.08 4.34
4960 6884 1.932160 CATCGTCCAAAAACGTCGTG 58.068 50.000 0.00 0.00 43.08 4.35
4961 6885 1.259507 CATCGTCCAAAAACGTCGTGT 59.740 47.619 0.00 0.00 43.08 4.49
4962 6886 0.646381 TCGTCCAAAAACGTCGTGTG 59.354 50.000 0.00 0.00 43.08 3.82
4963 6887 0.370958 CGTCCAAAAACGTCGTGTGT 59.629 50.000 0.00 0.00 37.86 3.72
4964 6888 1.587490 CGTCCAAAAACGTCGTGTGTA 59.413 47.619 0.00 0.00 37.86 2.90
4965 6889 2.219216 CGTCCAAAAACGTCGTGTGTAT 59.781 45.455 0.00 0.00 37.86 2.29
4966 6890 3.424861 CGTCCAAAAACGTCGTGTGTATA 59.575 43.478 0.00 0.00 37.86 1.47
4967 6891 4.431986 CGTCCAAAAACGTCGTGTGTATAG 60.432 45.833 0.00 0.00 37.86 1.31
4968 6892 3.429543 TCCAAAAACGTCGTGTGTATAGC 59.570 43.478 0.00 0.00 0.00 2.97
4969 6893 3.184783 CCAAAAACGTCGTGTGTATAGCA 59.815 43.478 0.00 0.00 0.00 3.49
4970 6894 4.382831 CAAAAACGTCGTGTGTATAGCAG 58.617 43.478 0.00 0.00 0.00 4.24
4971 6895 1.625616 AACGTCGTGTGTATAGCAGC 58.374 50.000 0.00 0.00 0.00 5.25
4972 6896 0.809385 ACGTCGTGTGTATAGCAGCT 59.191 50.000 0.00 0.00 0.00 4.24
4973 6897 1.202154 ACGTCGTGTGTATAGCAGCTC 60.202 52.381 0.00 0.00 0.00 4.09
4974 6898 1.064208 CGTCGTGTGTATAGCAGCTCT 59.936 52.381 0.00 0.00 0.00 4.09
4975 6899 2.722071 GTCGTGTGTATAGCAGCTCTC 58.278 52.381 0.00 0.00 0.00 3.20
4976 6900 1.676529 TCGTGTGTATAGCAGCTCTCC 59.323 52.381 0.00 0.00 0.00 3.71
4977 6901 1.598183 CGTGTGTATAGCAGCTCTCCG 60.598 57.143 0.00 0.00 0.00 4.63
4978 6902 0.385751 TGTGTATAGCAGCTCTCCGC 59.614 55.000 0.00 0.00 39.57 5.54
4979 6903 0.661780 GTGTATAGCAGCTCTCCGCG 60.662 60.000 0.00 0.00 45.59 6.46
4980 6904 1.731257 GTATAGCAGCTCTCCGCGC 60.731 63.158 0.00 0.00 45.59 6.86
4994 6918 4.162690 GCGCAGATCCCGGGAAGT 62.163 66.667 30.84 13.03 0.00 3.01
4995 6919 2.584608 CGCAGATCCCGGGAAGTT 59.415 61.111 30.84 12.07 0.00 2.66
4996 6920 1.820581 CGCAGATCCCGGGAAGTTA 59.179 57.895 30.84 3.59 0.00 2.24
4997 6921 0.177141 CGCAGATCCCGGGAAGTTAA 59.823 55.000 30.84 2.61 0.00 2.01
4998 6922 1.664873 GCAGATCCCGGGAAGTTAAC 58.335 55.000 30.84 14.37 0.00 2.01
4999 6923 1.065709 GCAGATCCCGGGAAGTTAACA 60.066 52.381 30.84 0.68 0.00 2.41
5000 6924 2.617021 GCAGATCCCGGGAAGTTAACAA 60.617 50.000 30.84 0.00 0.00 2.83
5002 6926 3.439129 CAGATCCCGGGAAGTTAACAAAC 59.561 47.826 30.84 8.63 0.00 2.93
5035 7365 2.278013 GCATCGTCCTCGTCGTCC 60.278 66.667 0.00 0.00 38.33 4.79
5115 7462 1.136147 GCAAAGTCAGCAGCATCCG 59.864 57.895 0.00 0.00 0.00 4.18
5144 7491 2.821366 GCATGGGTGAGCCACGAG 60.821 66.667 5.09 0.00 34.83 4.18
5166 7513 1.030488 CCAGGCCACAGAATCAGCAG 61.030 60.000 5.01 0.00 0.00 4.24
5178 7525 4.461781 CAGAATCAGCAGAAAACCAAGGAT 59.538 41.667 0.00 0.00 0.00 3.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.927675 TCTTGGCTAGAATAGTAAAACCAAAA 57.072 30.769 0.00 0.00 41.93 2.44
1 2 9.528489 AATCTTGGCTAGAATAGTAAAACCAAA 57.472 29.630 2.10 0.00 41.93 3.28
2 3 9.528489 AAATCTTGGCTAGAATAGTAAAACCAA 57.472 29.630 2.10 0.00 41.93 3.67
4 5 9.174166 TCAAATCTTGGCTAGAATAGTAAAACC 57.826 33.333 2.10 0.00 41.93 3.27
38 39 8.599774 GCTTTTGCAACAACTTTAGATACAAAA 58.400 29.630 0.00 0.00 46.58 2.44
39 40 8.125728 GCTTTTGCAACAACTTTAGATACAAA 57.874 30.769 0.00 0.00 46.58 2.83
40 41 7.692908 GCTTTTGCAACAACTTTAGATACAA 57.307 32.000 0.00 0.00 46.58 2.41
78 79 9.712305 CCCGTAAAACTTAGATTGATCTATCAT 57.288 33.333 17.62 7.01 39.02 2.45
79 80 8.701895 ACCCGTAAAACTTAGATTGATCTATCA 58.298 33.333 17.62 3.29 39.02 2.15
80 81 9.194271 GACCCGTAAAACTTAGATTGATCTATC 57.806 37.037 8.88 8.88 39.02 2.08
81 82 7.866393 CGACCCGTAAAACTTAGATTGATCTAT 59.134 37.037 1.79 0.00 39.02 1.98
82 83 7.198390 CGACCCGTAAAACTTAGATTGATCTA 58.802 38.462 0.00 0.00 38.32 1.98
83 84 6.040878 CGACCCGTAAAACTTAGATTGATCT 58.959 40.000 0.00 0.00 40.86 2.75
84 85 5.233689 CCGACCCGTAAAACTTAGATTGATC 59.766 44.000 0.00 0.00 0.00 2.92
85 86 5.114081 CCGACCCGTAAAACTTAGATTGAT 58.886 41.667 0.00 0.00 0.00 2.57
86 87 4.497300 CCGACCCGTAAAACTTAGATTGA 58.503 43.478 0.00 0.00 0.00 2.57
87 88 3.619929 CCCGACCCGTAAAACTTAGATTG 59.380 47.826 0.00 0.00 0.00 2.67
88 89 3.515104 TCCCGACCCGTAAAACTTAGATT 59.485 43.478 0.00 0.00 0.00 2.40
89 90 3.099141 TCCCGACCCGTAAAACTTAGAT 58.901 45.455 0.00 0.00 0.00 1.98
90 91 2.231235 GTCCCGACCCGTAAAACTTAGA 59.769 50.000 0.00 0.00 0.00 2.10
91 92 2.610433 GTCCCGACCCGTAAAACTTAG 58.390 52.381 0.00 0.00 0.00 2.18
92 93 1.067915 CGTCCCGACCCGTAAAACTTA 60.068 52.381 0.00 0.00 0.00 2.24
93 94 0.319813 CGTCCCGACCCGTAAAACTT 60.320 55.000 0.00 0.00 0.00 2.66
94 95 1.178534 TCGTCCCGACCCGTAAAACT 61.179 55.000 0.00 0.00 0.00 2.66
95 96 0.733909 CTCGTCCCGACCCGTAAAAC 60.734 60.000 0.00 0.00 0.00 2.43
96 97 1.586028 CTCGTCCCGACCCGTAAAA 59.414 57.895 0.00 0.00 0.00 1.52
97 98 2.993471 GCTCGTCCCGACCCGTAAA 61.993 63.158 0.00 0.00 0.00 2.01
98 99 3.443045 GCTCGTCCCGACCCGTAA 61.443 66.667 0.00 0.00 0.00 3.18
99 100 4.415150 AGCTCGTCCCGACCCGTA 62.415 66.667 0.00 0.00 0.00 4.02
102 103 4.436998 CACAGCTCGTCCCGACCC 62.437 72.222 0.00 0.00 0.00 4.46
103 104 3.628280 GACACAGCTCGTCCCGACC 62.628 68.421 1.92 0.00 0.00 4.79
104 105 2.126424 GACACAGCTCGTCCCGAC 60.126 66.667 1.92 0.00 0.00 4.79
105 106 2.596338 TGACACAGCTCGTCCCGA 60.596 61.111 9.73 0.00 32.15 5.14
106 107 1.938657 ATCTGACACAGCTCGTCCCG 61.939 60.000 9.73 2.71 32.15 5.14
107 108 0.179124 GATCTGACACAGCTCGTCCC 60.179 60.000 9.73 0.00 32.15 4.46
108 109 0.528017 TGATCTGACACAGCTCGTCC 59.472 55.000 9.73 0.00 30.28 4.79
109 110 1.470494 TCTGATCTGACACAGCTCGTC 59.530 52.381 5.95 5.95 30.28 4.20
110 111 1.539157 TCTGATCTGACACAGCTCGT 58.461 50.000 0.00 0.00 30.28 4.18
111 112 2.257894 GTTCTGATCTGACACAGCTCG 58.742 52.381 1.16 0.00 30.28 5.03
112 113 3.309961 TGTTCTGATCTGACACAGCTC 57.690 47.619 1.16 0.00 34.57 4.09
113 114 3.597255 CATGTTCTGATCTGACACAGCT 58.403 45.455 16.46 0.00 34.57 4.24
114 115 2.095532 GCATGTTCTGATCTGACACAGC 59.904 50.000 16.46 15.43 34.57 4.40
115 116 3.332034 TGCATGTTCTGATCTGACACAG 58.668 45.455 16.46 7.18 35.72 3.66
116 117 3.405823 TGCATGTTCTGATCTGACACA 57.594 42.857 14.87 14.87 0.00 3.72
117 118 5.503683 GCTTATGCATGTTCTGATCTGACAC 60.504 44.000 10.16 5.19 39.41 3.67
118 119 4.573607 GCTTATGCATGTTCTGATCTGACA 59.426 41.667 10.16 4.85 39.41 3.58
119 120 4.024218 GGCTTATGCATGTTCTGATCTGAC 60.024 45.833 10.16 0.00 41.91 3.51
120 121 4.132336 GGCTTATGCATGTTCTGATCTGA 58.868 43.478 10.16 0.00 41.91 3.27
121 122 3.059120 CGGCTTATGCATGTTCTGATCTG 60.059 47.826 10.16 0.00 41.91 2.90
122 123 3.136763 CGGCTTATGCATGTTCTGATCT 58.863 45.455 10.16 0.00 41.91 2.75
123 124 2.225019 CCGGCTTATGCATGTTCTGATC 59.775 50.000 10.16 0.00 41.91 2.92
124 125 2.224606 CCGGCTTATGCATGTTCTGAT 58.775 47.619 10.16 0.00 41.91 2.90
125 126 1.667236 CCGGCTTATGCATGTTCTGA 58.333 50.000 10.16 0.00 41.91 3.27
126 127 0.029834 GCCGGCTTATGCATGTTCTG 59.970 55.000 22.15 2.74 41.91 3.02
127 128 1.103398 GGCCGGCTTATGCATGTTCT 61.103 55.000 28.56 0.00 41.91 3.01
128 129 1.360192 GGCCGGCTTATGCATGTTC 59.640 57.895 28.56 0.00 41.91 3.18
129 130 2.127232 GGGCCGGCTTATGCATGTT 61.127 57.895 28.56 0.00 41.91 2.71
130 131 2.519302 GGGCCGGCTTATGCATGT 60.519 61.111 28.56 0.00 41.91 3.21
131 132 3.663176 CGGGCCGGCTTATGCATG 61.663 66.667 28.56 1.40 41.91 4.06
132 133 2.332312 TTACGGGCCGGCTTATGCAT 62.332 55.000 31.78 3.79 41.91 3.96
133 134 2.538512 TTTACGGGCCGGCTTATGCA 62.539 55.000 31.78 3.87 41.91 3.96
134 135 1.378124 TTTTACGGGCCGGCTTATGC 61.378 55.000 31.78 9.02 38.76 3.14
135 136 1.096416 TTTTTACGGGCCGGCTTATG 58.904 50.000 31.78 15.82 0.00 1.90
136 137 3.573626 TTTTTACGGGCCGGCTTAT 57.426 47.368 31.78 14.21 0.00 1.73
152 153 9.052759 AGAACATATTCGCGGAATATACTTTTT 57.947 29.630 17.48 9.83 41.52 1.94
153 154 8.603242 AGAACATATTCGCGGAATATACTTTT 57.397 30.769 17.48 11.40 41.52 2.27
154 155 8.603242 AAGAACATATTCGCGGAATATACTTT 57.397 30.769 17.48 12.98 41.52 2.66
155 156 8.603242 AAAGAACATATTCGCGGAATATACTT 57.397 30.769 17.48 17.69 41.52 2.24
156 157 8.603242 AAAAGAACATATTCGCGGAATATACT 57.397 30.769 17.48 14.74 41.52 2.12
159 160 8.450964 CCATAAAAGAACATATTCGCGGAATAT 58.549 33.333 6.13 11.60 43.42 1.28
160 161 7.094975 CCCATAAAAGAACATATTCGCGGAATA 60.095 37.037 6.13 9.72 40.04 1.75
161 162 6.293955 CCCATAAAAGAACATATTCGCGGAAT 60.294 38.462 6.13 7.64 40.04 3.01
162 163 5.008217 CCCATAAAAGAACATATTCGCGGAA 59.992 40.000 6.13 0.00 40.04 4.30
163 164 4.513692 CCCATAAAAGAACATATTCGCGGA 59.486 41.667 6.13 0.00 40.04 5.54
164 165 4.274950 ACCCATAAAAGAACATATTCGCGG 59.725 41.667 6.13 0.00 40.04 6.46
165 166 5.418310 ACCCATAAAAGAACATATTCGCG 57.582 39.130 0.00 0.00 40.04 5.87
166 167 5.298276 TGGACCCATAAAAGAACATATTCGC 59.702 40.000 0.00 0.00 40.04 4.70
167 168 6.935741 TGGACCCATAAAAGAACATATTCG 57.064 37.500 0.00 0.00 40.04 3.34
170 171 8.806146 GCATAATGGACCCATAAAAGAACATAT 58.194 33.333 1.41 0.00 35.31 1.78
171 172 7.040755 CGCATAATGGACCCATAAAAGAACATA 60.041 37.037 1.41 0.00 35.31 2.29
172 173 6.239008 CGCATAATGGACCCATAAAAGAACAT 60.239 38.462 1.41 0.00 35.31 2.71
173 174 5.067153 CGCATAATGGACCCATAAAAGAACA 59.933 40.000 1.41 0.00 35.31 3.18
174 175 5.507315 CCGCATAATGGACCCATAAAAGAAC 60.507 44.000 1.41 0.00 35.31 3.01
175 176 4.582656 CCGCATAATGGACCCATAAAAGAA 59.417 41.667 1.41 0.00 35.31 2.52
176 177 4.141287 CCGCATAATGGACCCATAAAAGA 58.859 43.478 1.41 0.00 35.31 2.52
177 178 3.255642 CCCGCATAATGGACCCATAAAAG 59.744 47.826 1.41 0.00 35.31 2.27
178 179 3.226777 CCCGCATAATGGACCCATAAAA 58.773 45.455 1.41 0.00 35.31 1.52
179 180 2.489985 CCCCGCATAATGGACCCATAAA 60.490 50.000 1.41 0.00 35.31 1.40
180 181 1.074727 CCCCGCATAATGGACCCATAA 59.925 52.381 1.41 0.00 35.31 1.90
181 182 0.695924 CCCCGCATAATGGACCCATA 59.304 55.000 1.41 0.00 35.31 2.74
182 183 1.360393 ACCCCGCATAATGGACCCAT 61.360 55.000 0.00 0.00 38.46 4.00
183 184 1.990160 GACCCCGCATAATGGACCCA 61.990 60.000 0.00 0.00 0.00 4.51
184 185 1.228154 GACCCCGCATAATGGACCC 60.228 63.158 0.00 0.00 0.00 4.46
185 186 0.535102 CAGACCCCGCATAATGGACC 60.535 60.000 0.00 0.00 0.00 4.46
186 187 1.166531 GCAGACCCCGCATAATGGAC 61.167 60.000 0.00 0.00 0.00 4.02
187 188 1.148273 GCAGACCCCGCATAATGGA 59.852 57.895 0.00 0.00 0.00 3.41
188 189 1.152984 TGCAGACCCCGCATAATGG 60.153 57.895 0.00 0.00 33.55 3.16
189 190 4.557554 TGCAGACCCCGCATAATG 57.442 55.556 0.00 0.00 33.55 1.90
221 222 3.700970 AATTTTTGGGGGCCGGCG 61.701 61.111 22.54 0.00 0.00 6.46
222 223 2.046411 CAATTTTTGGGGGCCGGC 60.046 61.111 21.18 21.18 0.00 6.13
223 224 0.109532 AAACAATTTTTGGGGGCCGG 59.890 50.000 0.00 0.00 34.12 6.13
224 225 1.606189 CAAAACAATTTTTGGGGGCCG 59.394 47.619 0.00 0.00 45.42 6.13
232 233 3.783873 GCAGTTCGCGCAAAACAATTTTT 60.784 39.130 20.74 0.92 35.15 1.94
233 234 2.285544 GCAGTTCGCGCAAAACAATTTT 60.286 40.909 20.74 1.54 0.00 1.82
234 235 1.257675 GCAGTTCGCGCAAAACAATTT 59.742 42.857 20.74 1.86 0.00 1.82
235 236 0.852136 GCAGTTCGCGCAAAACAATT 59.148 45.000 20.74 2.17 0.00 2.32
236 237 0.248825 TGCAGTTCGCGCAAAACAAT 60.249 45.000 20.74 2.79 46.97 2.71
237 238 0.456824 TTGCAGTTCGCGCAAAACAA 60.457 45.000 20.74 8.94 45.91 2.83
238 239 1.137614 TTGCAGTTCGCGCAAAACA 59.862 47.368 20.74 3.47 45.91 2.83
239 240 3.990141 TTGCAGTTCGCGCAAAAC 58.010 50.000 8.75 11.52 45.91 2.43
243 244 0.871722 ACTTATTTGCAGTTCGCGCA 59.128 45.000 8.75 0.00 46.97 6.09
244 245 1.963747 AACTTATTTGCAGTTCGCGC 58.036 45.000 0.00 0.00 46.97 6.86
245 246 4.890654 CGTATAACTTATTTGCAGTTCGCG 59.109 41.667 0.00 0.00 46.97 5.87
246 247 5.195379 CCGTATAACTTATTTGCAGTTCGC 58.805 41.667 0.00 0.00 42.89 4.70
247 248 5.292589 ACCCGTATAACTTATTTGCAGTTCG 59.707 40.000 0.00 0.00 35.95 3.95
248 249 6.509039 CGACCCGTATAACTTATTTGCAGTTC 60.509 42.308 0.00 0.00 35.95 3.01
249 250 5.292589 CGACCCGTATAACTTATTTGCAGTT 59.707 40.000 0.00 0.00 38.13 3.16
250 251 4.807304 CGACCCGTATAACTTATTTGCAGT 59.193 41.667 0.00 0.00 0.00 4.40
251 252 4.210537 CCGACCCGTATAACTTATTTGCAG 59.789 45.833 0.00 0.00 0.00 4.41
252 253 4.121317 CCGACCCGTATAACTTATTTGCA 58.879 43.478 0.00 0.00 0.00 4.08
253 254 3.059393 GCCGACCCGTATAACTTATTTGC 60.059 47.826 0.00 0.00 0.00 3.68
254 255 3.182972 CGCCGACCCGTATAACTTATTTG 59.817 47.826 0.00 0.00 0.00 2.32
255 256 3.383761 CGCCGACCCGTATAACTTATTT 58.616 45.455 0.00 0.00 0.00 1.40
256 257 2.288395 CCGCCGACCCGTATAACTTATT 60.288 50.000 0.00 0.00 0.00 1.40
257 258 1.270550 CCGCCGACCCGTATAACTTAT 59.729 52.381 0.00 0.00 0.00 1.73
258 259 0.667993 CCGCCGACCCGTATAACTTA 59.332 55.000 0.00 0.00 0.00 2.24
259 260 1.438814 CCGCCGACCCGTATAACTT 59.561 57.895 0.00 0.00 0.00 2.66
260 261 2.492773 CCCGCCGACCCGTATAACT 61.493 63.158 0.00 0.00 0.00 2.24
261 262 1.809567 ATCCCGCCGACCCGTATAAC 61.810 60.000 0.00 0.00 0.00 1.89
262 263 1.531365 ATCCCGCCGACCCGTATAA 60.531 57.895 0.00 0.00 0.00 0.98
263 264 2.115910 ATCCCGCCGACCCGTATA 59.884 61.111 0.00 0.00 0.00 1.47
264 265 3.612681 CATCCCGCCGACCCGTAT 61.613 66.667 0.00 0.00 0.00 3.06
273 274 4.864334 CAGACCCTGCATCCCGCC 62.864 72.222 0.00 0.00 41.33 6.13
282 283 0.901124 AGCAACTCTAGCAGACCCTG 59.099 55.000 0.00 0.00 34.12 4.45
283 284 1.190643 GAGCAACTCTAGCAGACCCT 58.809 55.000 0.00 0.00 0.00 4.34
284 285 1.190643 AGAGCAACTCTAGCAGACCC 58.809 55.000 0.00 0.00 39.28 4.46
285 286 3.697045 TCTAAGAGCAACTCTAGCAGACC 59.303 47.826 0.00 0.00 40.28 3.85
286 287 4.202010 CCTCTAAGAGCAACTCTAGCAGAC 60.202 50.000 0.00 0.00 40.28 3.51
287 288 3.951037 CCTCTAAGAGCAACTCTAGCAGA 59.049 47.826 0.00 1.40 40.28 4.26
288 289 3.490761 GCCTCTAAGAGCAACTCTAGCAG 60.491 52.174 0.00 0.00 40.28 4.24
289 290 2.428890 GCCTCTAAGAGCAACTCTAGCA 59.571 50.000 0.00 0.00 40.28 3.49
290 291 2.223947 GGCCTCTAAGAGCAACTCTAGC 60.224 54.545 0.00 0.00 40.28 3.42
291 292 3.027412 TGGCCTCTAAGAGCAACTCTAG 58.973 50.000 3.32 0.00 40.28 2.43
292 293 3.101643 TGGCCTCTAAGAGCAACTCTA 57.898 47.619 3.32 0.00 40.28 2.43
293 294 1.944177 TGGCCTCTAAGAGCAACTCT 58.056 50.000 3.32 0.00 43.37 3.24
294 295 2.770164 TTGGCCTCTAAGAGCAACTC 57.230 50.000 3.32 0.00 0.00 3.01
295 296 3.149981 GTTTTGGCCTCTAAGAGCAACT 58.850 45.455 3.32 0.00 0.00 3.16
296 297 2.884639 TGTTTTGGCCTCTAAGAGCAAC 59.115 45.455 3.32 0.00 0.00 4.17
297 298 2.884639 GTGTTTTGGCCTCTAAGAGCAA 59.115 45.455 3.32 0.00 0.00 3.91
298 299 2.158682 TGTGTTTTGGCCTCTAAGAGCA 60.159 45.455 3.32 0.00 0.00 4.26
299 300 2.226674 GTGTGTTTTGGCCTCTAAGAGC 59.773 50.000 3.32 0.00 0.00 4.09
300 301 3.476552 TGTGTGTTTTGGCCTCTAAGAG 58.523 45.455 3.32 0.00 0.00 2.85
301 302 3.569194 TGTGTGTTTTGGCCTCTAAGA 57.431 42.857 3.32 0.00 0.00 2.10
313 314 3.037549 ACCATTGTCCCATTGTGTGTTT 58.962 40.909 0.00 0.00 0.00 2.83
344 345 4.927978 TCTTTTTCCTTTGCAATTCGGA 57.072 36.364 0.00 4.16 0.00 4.55
388 389 1.214367 TGCGTGTTCCGAAGAAGTTC 58.786 50.000 0.00 0.00 39.56 3.01
404 405 2.612212 GGGTAATACACTGGACAATGCG 59.388 50.000 0.00 0.00 0.00 4.73
430 431 3.479590 GTCGTTTTGTTGCGGAACTTTAC 59.520 43.478 20.82 13.41 32.79 2.01
462 463 9.771915 TCGGTTTTATTTTTATCCGTTCATAAC 57.228 29.630 0.00 0.00 39.14 1.89
465 466 7.751793 GTGTCGGTTTTATTTTTATCCGTTCAT 59.248 33.333 0.00 0.00 39.14 2.57
503 504 7.976135 ATTTTGCAAATTGTTACCAATAGCA 57.024 28.000 13.65 8.37 44.05 3.49
509 510 8.738645 ACCTTTTATTTTGCAAATTGTTACCA 57.261 26.923 13.65 0.00 0.00 3.25
541 665 5.263968 TGGCGGAAAAGACAAAATTACAA 57.736 34.783 0.00 0.00 0.00 2.41
544 668 5.263968 TGTTGGCGGAAAAGACAAAATTA 57.736 34.783 0.00 0.00 41.36 1.40
545 669 4.130286 TGTTGGCGGAAAAGACAAAATT 57.870 36.364 0.00 0.00 41.36 1.82
550 674 1.339610 CCATTGTTGGCGGAAAAGACA 59.660 47.619 0.00 0.00 35.85 3.41
570 694 1.021968 AAAGTTCGGGACAAGTGTGC 58.978 50.000 0.00 0.00 35.50 4.57
575 699 4.062293 TCATGTGTAAAGTTCGGGACAAG 58.938 43.478 0.00 0.00 0.00 3.16
576 700 4.062293 CTCATGTGTAAAGTTCGGGACAA 58.938 43.478 0.00 0.00 0.00 3.18
577 701 3.070446 ACTCATGTGTAAAGTTCGGGACA 59.930 43.478 0.00 0.00 0.00 4.02
581 705 5.867174 TGTATCACTCATGTGTAAAGTTCGG 59.133 40.000 0.00 0.00 44.14 4.30
582 706 6.586463 AGTGTATCACTCATGTGTAAAGTTCG 59.414 38.462 0.00 0.00 41.21 3.95
583 707 7.891183 AGTGTATCACTCATGTGTAAAGTTC 57.109 36.000 0.00 0.00 41.21 3.01
584 708 8.803235 TCTAGTGTATCACTCATGTGTAAAGTT 58.197 33.333 5.66 0.00 41.21 2.66
585 709 8.244802 GTCTAGTGTATCACTCATGTGTAAAGT 58.755 37.037 5.66 0.00 41.21 2.66
586 710 8.244113 TGTCTAGTGTATCACTCATGTGTAAAG 58.756 37.037 5.66 0.00 41.21 1.85
587 711 8.117813 TGTCTAGTGTATCACTCATGTGTAAA 57.882 34.615 5.66 0.00 41.21 2.01
588 712 7.696992 TGTCTAGTGTATCACTCATGTGTAA 57.303 36.000 5.66 0.00 41.21 2.41
590 714 6.390721 GTTGTCTAGTGTATCACTCATGTGT 58.609 40.000 5.66 0.00 41.21 3.72
594 726 4.399618 AGCGTTGTCTAGTGTATCACTCAT 59.600 41.667 5.66 0.00 41.21 2.90
600 732 4.326548 GGAACAAGCGTTGTCTAGTGTATC 59.673 45.833 4.28 0.00 44.59 2.24
603 735 2.480845 GGAACAAGCGTTGTCTAGTGT 58.519 47.619 4.28 0.00 44.59 3.55
608 740 2.736144 TATCGGAACAAGCGTTGTCT 57.264 45.000 4.28 0.00 44.59 3.41
614 746 7.734538 AATTGTAATTTTATCGGAACAAGCG 57.265 32.000 0.00 0.00 31.09 4.68
640 772 9.981460 ACTCCAGATTTATTTCATTCCTTTAGT 57.019 29.630 0.00 0.00 0.00 2.24
651 783 9.717892 GGACGAAAATTACTCCAGATTTATTTC 57.282 33.333 0.00 0.00 0.00 2.17
652 784 8.395633 CGGACGAAAATTACTCCAGATTTATTT 58.604 33.333 0.00 0.00 0.00 1.40
656 788 5.243207 ACGGACGAAAATTACTCCAGATTT 58.757 37.500 0.00 0.00 0.00 2.17
657 789 4.828829 ACGGACGAAAATTACTCCAGATT 58.171 39.130 0.00 0.00 0.00 2.40
658 790 4.467198 ACGGACGAAAATTACTCCAGAT 57.533 40.909 0.00 0.00 0.00 2.90
660 792 6.657836 AAATACGGACGAAAATTACTCCAG 57.342 37.500 0.00 0.00 0.00 3.86
661 793 8.605746 CAATAAATACGGACGAAAATTACTCCA 58.394 33.333 0.00 0.00 0.00 3.86
662 794 8.066000 CCAATAAATACGGACGAAAATTACTCC 58.934 37.037 0.00 0.00 0.00 3.85
664 796 8.392612 CACCAATAAATACGGACGAAAATTACT 58.607 33.333 0.00 0.00 0.00 2.24
665 797 8.177013 ACACCAATAAATACGGACGAAAATTAC 58.823 33.333 0.00 0.00 0.00 1.89
670 802 6.873076 AGTAACACCAATAAATACGGACGAAA 59.127 34.615 0.00 0.00 0.00 3.46
671 803 6.397272 AGTAACACCAATAAATACGGACGAA 58.603 36.000 0.00 0.00 0.00 3.85
672 804 5.964758 AGTAACACCAATAAATACGGACGA 58.035 37.500 0.00 0.00 0.00 4.20
673 805 5.232838 GGAGTAACACCAATAAATACGGACG 59.767 44.000 0.00 0.00 0.00 4.79
674 806 6.108015 TGGAGTAACACCAATAAATACGGAC 58.892 40.000 0.00 0.00 34.25 4.79
675 807 6.154877 TCTGGAGTAACACCAATAAATACGGA 59.845 38.462 0.00 0.00 36.95 4.69
677 809 8.433421 AATCTGGAGTAACACCAATAAATACG 57.567 34.615 0.00 0.00 36.95 3.06
685 817 9.362151 AGAAAAATAAATCTGGAGTAACACCAA 57.638 29.630 0.00 0.00 36.95 3.67
686 818 8.934023 AGAAAAATAAATCTGGAGTAACACCA 57.066 30.769 0.00 0.00 35.96 4.17
726 1301 1.275573 ACAGGGAGCTTTTACCTCGTC 59.724 52.381 0.00 0.00 30.66 4.20
729 1304 2.738964 CGCTACAGGGAGCTTTTACCTC 60.739 54.545 1.46 0.00 40.51 3.85
736 1311 0.900647 ACAGTCGCTACAGGGAGCTT 60.901 55.000 1.46 0.00 40.51 3.74
742 1418 0.247576 CGTACGACAGTCGCTACAGG 60.248 60.000 23.09 7.66 45.12 4.00
747 1423 1.154263 GCTTCGTACGACAGTCGCT 60.154 57.895 23.09 12.37 45.12 4.93
852 1551 1.449246 GGCAGCAGTAGCAGTCAGG 60.449 63.158 0.00 0.00 45.49 3.86
853 1552 1.808799 CGGCAGCAGTAGCAGTCAG 60.809 63.158 0.00 0.00 45.49 3.51
854 1553 2.262603 CGGCAGCAGTAGCAGTCA 59.737 61.111 0.00 0.00 45.49 3.41
855 1554 3.191539 GCGGCAGCAGTAGCAGTC 61.192 66.667 3.18 0.00 45.49 3.51
887 1606 1.332144 GGCGGATGGGTGTAGGTGTA 61.332 60.000 0.00 0.00 0.00 2.90
888 1607 2.666098 GGCGGATGGGTGTAGGTGT 61.666 63.158 0.00 0.00 0.00 4.16
889 1608 2.189521 GGCGGATGGGTGTAGGTG 59.810 66.667 0.00 0.00 0.00 4.00
890 1609 3.087906 GGGCGGATGGGTGTAGGT 61.088 66.667 0.00 0.00 0.00 3.08
891 1610 4.235762 CGGGCGGATGGGTGTAGG 62.236 72.222 0.00 0.00 0.00 3.18
892 1611 3.441011 GACGGGCGGATGGGTGTAG 62.441 68.421 0.00 0.00 0.00 2.74
893 1612 3.463585 GACGGGCGGATGGGTGTA 61.464 66.667 0.00 0.00 0.00 2.90
905 1624 3.717294 CAAGTGGGGGAGGACGGG 61.717 72.222 0.00 0.00 0.00 5.28
2190 3393 1.598962 CGCCCCTCATGTAGCATGG 60.599 63.158 8.95 1.23 0.00 3.66
3248 4841 6.006275 TCCAGGCTTAATCTTGCTCTATTT 57.994 37.500 0.00 0.00 0.00 1.40
3351 4965 5.398353 CCAATCTCCAACTTATCCTGGTCAT 60.398 44.000 0.00 0.00 34.11 3.06
4283 5954 5.011635 TCCCGAGCAATAAATAGCAGTATCA 59.988 40.000 0.00 0.00 0.00 2.15
4336 6008 4.753662 TGGGTCCTCGGGGAGACG 62.754 72.222 2.77 0.00 43.12 4.18
4337 6009 2.284405 TTGGGTCCTCGGGGAGAC 60.284 66.667 2.77 0.00 43.12 3.36
4338 6010 2.284405 GTTGGGTCCTCGGGGAGA 60.284 66.667 2.77 0.00 43.12 3.71
4340 6012 3.572715 ATGGTTGGGTCCTCGGGGA 62.573 63.158 0.00 0.00 39.70 4.81
4341 6013 3.015145 ATGGTTGGGTCCTCGGGG 61.015 66.667 0.00 0.00 0.00 5.73
4342 6014 1.995626 AGATGGTTGGGTCCTCGGG 60.996 63.158 0.00 0.00 0.00 5.14
4345 6017 0.693049 ACACAGATGGTTGGGTCCTC 59.307 55.000 0.00 0.00 24.76 3.71
4347 6019 1.534729 GAACACAGATGGTTGGGTCC 58.465 55.000 0.00 0.00 32.38 4.46
4348 6020 1.534729 GGAACACAGATGGTTGGGTC 58.465 55.000 0.00 0.00 32.38 4.46
4352 6024 1.993956 TTGGGGAACACAGATGGTTG 58.006 50.000 0.00 0.00 0.00 3.77
4353 6025 2.765689 TTTGGGGAACACAGATGGTT 57.234 45.000 0.00 0.00 0.00 3.67
4354 6026 2.765689 TTTTGGGGAACACAGATGGT 57.234 45.000 0.00 0.00 0.00 3.55
4355 6027 3.230134 TCTTTTTGGGGAACACAGATGG 58.770 45.455 0.00 0.00 0.00 3.51
4356 6028 4.935352 TTCTTTTTGGGGAACACAGATG 57.065 40.909 0.00 0.00 0.00 2.90
4357 6029 5.948742 TTTTCTTTTTGGGGAACACAGAT 57.051 34.783 0.00 0.00 0.00 2.90
4358 6030 5.746990 TTTTTCTTTTTGGGGAACACAGA 57.253 34.783 0.00 0.00 0.00 3.41
4390 6064 9.976511 TCCATTACAGCATTACATTACTACTAC 57.023 33.333 0.00 0.00 0.00 2.73
4396 6070 9.893305 GGTAATTCCATTACAGCATTACATTAC 57.107 33.333 8.52 0.00 45.32 1.89
4397 6071 9.073475 GGGTAATTCCATTACAGCATTACATTA 57.927 33.333 8.52 0.00 45.32 1.90
4398 6072 7.255451 CGGGTAATTCCATTACAGCATTACATT 60.255 37.037 8.52 0.00 45.32 2.71
4399 6073 6.206634 CGGGTAATTCCATTACAGCATTACAT 59.793 38.462 8.52 0.00 45.32 2.29
4400 6074 5.529430 CGGGTAATTCCATTACAGCATTACA 59.471 40.000 8.52 0.00 45.32 2.41
4407 6081 5.466728 CACATCTCGGGTAATTCCATTACAG 59.533 44.000 8.52 3.12 45.32 2.74
4413 6087 4.028131 AGTACACATCTCGGGTAATTCCA 58.972 43.478 0.00 0.00 38.11 3.53
4417 6091 4.278669 CAGCTAGTACACATCTCGGGTAAT 59.721 45.833 0.00 0.00 0.00 1.89
4426 6100 4.378459 GCCACAAAACAGCTAGTACACATC 60.378 45.833 0.00 0.00 0.00 3.06
4429 6103 2.096417 CGCCACAAAACAGCTAGTACAC 60.096 50.000 0.00 0.00 0.00 2.90
4432 6106 1.153353 GCGCCACAAAACAGCTAGTA 58.847 50.000 0.00 0.00 0.00 1.82
4433 6107 1.841663 CGCGCCACAAAACAGCTAGT 61.842 55.000 0.00 0.00 0.00 2.57
4434 6108 1.154413 CGCGCCACAAAACAGCTAG 60.154 57.895 0.00 0.00 0.00 3.42
4511 6200 1.602668 GGCAACGCAACACACAATCAT 60.603 47.619 0.00 0.00 0.00 2.45
4512 6201 0.248825 GGCAACGCAACACACAATCA 60.249 50.000 0.00 0.00 0.00 2.57
4513 6202 2.505447 GGCAACGCAACACACAATC 58.495 52.632 0.00 0.00 0.00 2.67
4514 6203 4.728058 GGCAACGCAACACACAAT 57.272 50.000 0.00 0.00 0.00 2.71
4544 6233 1.581934 ACCACATCACACGACACTTG 58.418 50.000 0.00 0.00 0.00 3.16
4557 6253 2.884012 CCACACACAACACATACCACAT 59.116 45.455 0.00 0.00 0.00 3.21
4558 6254 2.293170 CCACACACAACACATACCACA 58.707 47.619 0.00 0.00 0.00 4.17
4559 6255 1.606668 CCCACACACAACACATACCAC 59.393 52.381 0.00 0.00 0.00 4.16
4560 6256 1.213182 ACCCACACACAACACATACCA 59.787 47.619 0.00 0.00 0.00 3.25
4561 6257 1.606668 CACCCACACACAACACATACC 59.393 52.381 0.00 0.00 0.00 2.73
4562 6258 1.606668 CCACCCACACACAACACATAC 59.393 52.381 0.00 0.00 0.00 2.39
4563 6259 1.477740 CCCACCCACACACAACACATA 60.478 52.381 0.00 0.00 0.00 2.29
4564 6260 0.754957 CCCACCCACACACAACACAT 60.755 55.000 0.00 0.00 0.00 3.21
4565 6261 1.379176 CCCACCCACACACAACACA 60.379 57.895 0.00 0.00 0.00 3.72
4566 6262 1.379309 ACCCACCCACACACAACAC 60.379 57.895 0.00 0.00 0.00 3.32
4567 6263 1.379176 CACCCACCCACACACAACA 60.379 57.895 0.00 0.00 0.00 3.33
4568 6264 2.781158 GCACCCACCCACACACAAC 61.781 63.158 0.00 0.00 0.00 3.32
4569 6265 2.441164 GCACCCACCCACACACAA 60.441 61.111 0.00 0.00 0.00 3.33
4570 6266 3.415983 AGCACCCACCCACACACA 61.416 61.111 0.00 0.00 0.00 3.72
4571 6267 2.332312 TACAGCACCCACCCACACAC 62.332 60.000 0.00 0.00 0.00 3.82
4604 6300 3.116300 GCATCACGGTCAGTACACATAG 58.884 50.000 0.00 0.00 0.00 2.23
4619 6315 0.306533 ACGGACAAACAACGCATCAC 59.693 50.000 0.00 0.00 0.00 3.06
4635 6331 9.504710 CGGACAATATATAGAGAGATAAAACGG 57.495 37.037 0.00 0.00 0.00 4.44
4646 6342 7.096189 CGGACAAACAACGGACAATATATAGAG 60.096 40.741 0.00 0.00 0.00 2.43
4650 6346 5.180271 ACGGACAAACAACGGACAATATAT 58.820 37.500 0.00 0.00 0.00 0.86
4653 6349 2.836262 ACGGACAAACAACGGACAATA 58.164 42.857 0.00 0.00 0.00 1.90
4654 6350 1.670791 ACGGACAAACAACGGACAAT 58.329 45.000 0.00 0.00 0.00 2.71
4655 6351 1.397692 GAACGGACAAACAACGGACAA 59.602 47.619 0.00 0.00 0.00 3.18
4658 6354 1.152989 CCGAACGGACAAACAACGGA 61.153 55.000 7.53 0.00 41.09 4.69
4659 6355 1.277440 CCGAACGGACAAACAACGG 59.723 57.895 7.53 0.00 37.50 4.44
4661 6357 0.309612 ATGCCGAACGGACAAACAAC 59.690 50.000 17.63 0.00 37.50 3.32
4662 6358 0.589223 GATGCCGAACGGACAAACAA 59.411 50.000 17.63 0.00 37.50 2.83
4664 6360 1.500396 GGATGCCGAACGGACAAAC 59.500 57.895 17.63 11.60 37.50 2.93
4665 6361 1.673009 GGGATGCCGAACGGACAAA 60.673 57.895 17.63 0.00 37.50 2.83
4666 6362 2.046700 GGGATGCCGAACGGACAA 60.047 61.111 17.63 1.99 37.50 3.18
4669 6506 4.467084 GCTGGGATGCCGAACGGA 62.467 66.667 17.63 2.87 37.50 4.69
4670 6507 4.473520 AGCTGGGATGCCGAACGG 62.474 66.667 9.00 9.00 38.57 4.44
4678 6515 2.821366 GACGCACCAGCTGGGATG 60.821 66.667 35.42 25.83 41.15 3.51
4679 6516 4.101448 GGACGCACCAGCTGGGAT 62.101 66.667 35.42 18.04 41.15 3.85
4695 6532 1.821332 GCCAAATCTCTCGGCTGGG 60.821 63.158 0.00 0.00 42.78 4.45
4696 6533 1.078214 TGCCAAATCTCTCGGCTGG 60.078 57.895 0.00 0.00 46.39 4.85
4697 6534 1.699656 CGTGCCAAATCTCTCGGCTG 61.700 60.000 0.00 0.00 46.39 4.85
4734 6648 1.962822 CATCCCCATGTCCATCGCG 60.963 63.158 0.00 0.00 0.00 5.87
4744 6658 2.124736 CGGTTCGTGCATCCCCAT 60.125 61.111 0.00 0.00 0.00 4.00
4747 6661 2.818274 GTCCGGTTCGTGCATCCC 60.818 66.667 0.00 0.00 0.00 3.85
4748 6662 1.635663 CTTGTCCGGTTCGTGCATCC 61.636 60.000 0.00 0.00 0.00 3.51
4749 6663 1.635663 CCTTGTCCGGTTCGTGCATC 61.636 60.000 0.00 0.00 0.00 3.91
4750 6664 1.671054 CCTTGTCCGGTTCGTGCAT 60.671 57.895 0.00 0.00 0.00 3.96
4764 6688 2.356194 GCCGCAAACCAAGCCTTG 60.356 61.111 0.00 0.00 0.00 3.61
4788 6712 0.167689 GCCGGAGATATCGTCGTACC 59.832 60.000 5.05 6.20 0.00 3.34
4828 6752 6.028987 GGAGTGTCGTCTGTCTAGTATTTTC 58.971 44.000 0.00 0.00 0.00 2.29
4829 6753 5.475909 TGGAGTGTCGTCTGTCTAGTATTTT 59.524 40.000 0.00 0.00 0.00 1.82
4830 6754 5.008331 TGGAGTGTCGTCTGTCTAGTATTT 58.992 41.667 0.00 0.00 0.00 1.40
4831 6755 4.586884 TGGAGTGTCGTCTGTCTAGTATT 58.413 43.478 0.00 0.00 0.00 1.89
4832 6756 4.217836 TGGAGTGTCGTCTGTCTAGTAT 57.782 45.455 0.00 0.00 0.00 2.12
4833 6757 3.690475 TGGAGTGTCGTCTGTCTAGTA 57.310 47.619 0.00 0.00 0.00 1.82
4835 6759 2.478709 GCATGGAGTGTCGTCTGTCTAG 60.479 54.545 0.00 0.00 0.00 2.43
4837 6761 0.244994 GCATGGAGTGTCGTCTGTCT 59.755 55.000 0.00 0.00 0.00 3.41
4842 6766 0.458543 ATCGTGCATGGAGTGTCGTC 60.459 55.000 5.98 0.00 0.00 4.20
4844 6768 2.001357 CATCGTGCATGGAGTGTCG 58.999 57.895 5.98 0.00 0.00 4.35
4845 6769 1.717937 GCATCGTGCATGGAGTGTC 59.282 57.895 5.98 0.00 44.26 3.67
4855 6779 0.523968 AAATCGTGCATGCATCGTGC 60.524 50.000 28.81 15.92 45.53 5.34
4856 6780 2.222999 TGTAAATCGTGCATGCATCGTG 60.223 45.455 28.81 18.82 0.00 4.35
4857 6781 2.006169 TGTAAATCGTGCATGCATCGT 58.994 42.857 28.81 18.83 0.00 3.73
4858 6782 2.735643 TGTAAATCGTGCATGCATCG 57.264 45.000 25.64 26.06 0.00 3.84
4859 6783 4.600032 TGATTGTAAATCGTGCATGCATC 58.400 39.130 25.64 16.09 0.00 3.91
4860 6784 4.336153 TCTGATTGTAAATCGTGCATGCAT 59.664 37.500 25.64 10.06 0.00 3.96
4861 6785 3.688673 TCTGATTGTAAATCGTGCATGCA 59.311 39.130 18.46 18.46 0.00 3.96
4862 6786 4.277257 TCTGATTGTAAATCGTGCATGC 57.723 40.909 11.82 11.82 0.00 4.06
4863 6787 5.007921 TCCATCTGATTGTAAATCGTGCATG 59.992 40.000 0.00 0.00 0.00 4.06
4864 6788 5.125356 TCCATCTGATTGTAAATCGTGCAT 58.875 37.500 0.00 0.00 0.00 3.96
4865 6789 4.512484 TCCATCTGATTGTAAATCGTGCA 58.488 39.130 0.00 0.00 0.00 4.57
4866 6790 5.008019 ACATCCATCTGATTGTAAATCGTGC 59.992 40.000 0.00 0.00 0.00 5.34
4867 6791 6.258507 TCACATCCATCTGATTGTAAATCGTG 59.741 38.462 0.00 0.00 0.00 4.35
4868 6792 6.348498 TCACATCCATCTGATTGTAAATCGT 58.652 36.000 0.00 0.00 0.00 3.73
4869 6793 6.849588 TCACATCCATCTGATTGTAAATCG 57.150 37.500 0.00 0.00 0.00 3.34
4870 6794 7.137426 GCTTCACATCCATCTGATTGTAAATC 58.863 38.462 0.00 0.00 0.00 2.17
4871 6795 6.604396 TGCTTCACATCCATCTGATTGTAAAT 59.396 34.615 0.00 0.00 0.00 1.40
4872 6796 5.945191 TGCTTCACATCCATCTGATTGTAAA 59.055 36.000 0.00 0.00 0.00 2.01
4873 6797 5.355071 GTGCTTCACATCCATCTGATTGTAA 59.645 40.000 0.00 0.00 34.08 2.41
4874 6798 4.877823 GTGCTTCACATCCATCTGATTGTA 59.122 41.667 0.00 0.00 34.08 2.41
4875 6799 3.693085 GTGCTTCACATCCATCTGATTGT 59.307 43.478 0.00 0.00 34.08 2.71
4876 6800 3.945921 AGTGCTTCACATCCATCTGATTG 59.054 43.478 0.00 0.00 36.74 2.67
4877 6801 4.232188 AGTGCTTCACATCCATCTGATT 57.768 40.909 0.00 0.00 36.74 2.57
4878 6802 3.928005 AGTGCTTCACATCCATCTGAT 57.072 42.857 0.00 0.00 36.74 2.90
4879 6803 3.708403 AAGTGCTTCACATCCATCTGA 57.292 42.857 0.00 0.00 36.74 3.27
4880 6804 6.446781 AATAAAGTGCTTCACATCCATCTG 57.553 37.500 0.00 0.00 36.74 2.90
4881 6805 5.591877 GGAATAAAGTGCTTCACATCCATCT 59.408 40.000 0.00 0.00 36.74 2.90
4882 6806 5.221126 GGGAATAAAGTGCTTCACATCCATC 60.221 44.000 0.00 0.00 36.74 3.51
4883 6807 4.646492 GGGAATAAAGTGCTTCACATCCAT 59.354 41.667 0.00 0.00 36.74 3.41
4884 6808 4.016444 GGGAATAAAGTGCTTCACATCCA 58.984 43.478 0.00 0.00 36.74 3.41
4885 6809 4.096984 CAGGGAATAAAGTGCTTCACATCC 59.903 45.833 0.00 0.00 36.74 3.51
4886 6810 4.943705 TCAGGGAATAAAGTGCTTCACATC 59.056 41.667 0.00 0.00 36.74 3.06
4887 6811 4.922206 TCAGGGAATAAAGTGCTTCACAT 58.078 39.130 0.00 0.00 36.74 3.21
4888 6812 4.365514 TCAGGGAATAAAGTGCTTCACA 57.634 40.909 0.00 0.00 36.74 3.58
4889 6813 5.415701 TGAATCAGGGAATAAAGTGCTTCAC 59.584 40.000 0.00 0.00 34.10 3.18
4890 6814 5.569355 TGAATCAGGGAATAAAGTGCTTCA 58.431 37.500 0.00 0.00 0.00 3.02
4891 6815 6.515272 TTGAATCAGGGAATAAAGTGCTTC 57.485 37.500 0.00 0.00 0.00 3.86
4892 6816 6.127253 CCATTGAATCAGGGAATAAAGTGCTT 60.127 38.462 0.00 0.00 0.00 3.91
4893 6817 5.361857 CCATTGAATCAGGGAATAAAGTGCT 59.638 40.000 0.00 0.00 0.00 4.40
4894 6818 5.594926 CCATTGAATCAGGGAATAAAGTGC 58.405 41.667 0.00 0.00 0.00 4.40
4895 6819 5.361857 AGCCATTGAATCAGGGAATAAAGTG 59.638 40.000 7.14 0.00 0.00 3.16
4896 6820 5.361857 CAGCCATTGAATCAGGGAATAAAGT 59.638 40.000 7.14 0.00 0.00 2.66
4897 6821 5.221382 CCAGCCATTGAATCAGGGAATAAAG 60.221 44.000 7.14 0.00 0.00 1.85
4898 6822 4.650588 CCAGCCATTGAATCAGGGAATAAA 59.349 41.667 7.14 0.00 0.00 1.40
4899 6823 4.079269 TCCAGCCATTGAATCAGGGAATAA 60.079 41.667 7.14 0.00 0.00 1.40
4900 6824 3.462954 TCCAGCCATTGAATCAGGGAATA 59.537 43.478 7.14 0.00 0.00 1.75
4901 6825 2.245546 TCCAGCCATTGAATCAGGGAAT 59.754 45.455 7.14 0.00 0.00 3.01
4902 6826 1.640149 TCCAGCCATTGAATCAGGGAA 59.360 47.619 7.14 0.00 0.00 3.97
4903 6827 1.297968 TCCAGCCATTGAATCAGGGA 58.702 50.000 7.14 0.00 0.00 4.20
4904 6828 1.961394 CATCCAGCCATTGAATCAGGG 59.039 52.381 0.00 0.00 0.00 4.45
4905 6829 2.361119 CACATCCAGCCATTGAATCAGG 59.639 50.000 0.00 0.00 0.00 3.86
4906 6830 2.361119 CCACATCCAGCCATTGAATCAG 59.639 50.000 0.00 0.00 0.00 2.90
4907 6831 2.025131 TCCACATCCAGCCATTGAATCA 60.025 45.455 0.00 0.00 0.00 2.57
4908 6832 2.621998 CTCCACATCCAGCCATTGAATC 59.378 50.000 0.00 0.00 0.00 2.52
4909 6833 2.662866 CTCCACATCCAGCCATTGAAT 58.337 47.619 0.00 0.00 0.00 2.57
4910 6834 1.956636 GCTCCACATCCAGCCATTGAA 60.957 52.381 0.00 0.00 0.00 2.69
4911 6835 0.394762 GCTCCACATCCAGCCATTGA 60.395 55.000 0.00 0.00 0.00 2.57
4912 6836 1.721664 CGCTCCACATCCAGCCATTG 61.722 60.000 0.00 0.00 31.37 2.82
4913 6837 1.452651 CGCTCCACATCCAGCCATT 60.453 57.895 0.00 0.00 31.37 3.16
4914 6838 2.191375 CGCTCCACATCCAGCCAT 59.809 61.111 0.00 0.00 31.37 4.40
4915 6839 3.315142 GACGCTCCACATCCAGCCA 62.315 63.158 0.00 0.00 31.37 4.75
4916 6840 2.512515 GACGCTCCACATCCAGCC 60.513 66.667 0.00 0.00 31.37 4.85
4917 6841 2.887568 CGACGCTCCACATCCAGC 60.888 66.667 0.00 0.00 0.00 4.85
4918 6842 1.078759 GAACGACGCTCCACATCCAG 61.079 60.000 0.00 0.00 0.00 3.86
4919 6843 1.080093 GAACGACGCTCCACATCCA 60.080 57.895 0.00 0.00 0.00 3.41
4920 6844 0.460284 ATGAACGACGCTCCACATCC 60.460 55.000 0.00 0.00 0.00 3.51
4921 6845 0.647410 CATGAACGACGCTCCACATC 59.353 55.000 0.00 0.00 0.00 3.06
4922 6846 1.361668 GCATGAACGACGCTCCACAT 61.362 55.000 0.00 0.00 0.00 3.21
4923 6847 2.027073 GCATGAACGACGCTCCACA 61.027 57.895 0.00 0.00 0.00 4.17
4924 6848 1.361668 ATGCATGAACGACGCTCCAC 61.362 55.000 0.00 0.00 0.00 4.02
4925 6849 1.079197 ATGCATGAACGACGCTCCA 60.079 52.632 0.00 0.00 0.00 3.86
4926 6850 1.638467 GATGCATGAACGACGCTCC 59.362 57.895 2.46 0.00 0.00 4.70
4927 6851 1.270968 CGATGCATGAACGACGCTC 59.729 57.895 2.46 0.00 0.00 5.03
4928 6852 1.413767 GACGATGCATGAACGACGCT 61.414 55.000 2.46 0.00 0.00 5.07
4929 6853 1.013323 GACGATGCATGAACGACGC 60.013 57.895 2.46 0.00 0.00 5.19
4930 6854 1.075979 TGGACGATGCATGAACGACG 61.076 55.000 2.46 2.20 0.00 5.12
4931 6855 1.075542 TTGGACGATGCATGAACGAC 58.924 50.000 2.46 1.66 0.00 4.34
4932 6856 1.802069 TTTGGACGATGCATGAACGA 58.198 45.000 2.46 0.00 0.00 3.85
4933 6857 2.610219 TTTTGGACGATGCATGAACG 57.390 45.000 2.46 3.95 0.00 3.95
4934 6858 2.656422 CGTTTTTGGACGATGCATGAAC 59.344 45.455 2.46 0.00 45.47 3.18
4935 6859 2.292016 ACGTTTTTGGACGATGCATGAA 59.708 40.909 2.46 0.00 45.47 2.57
4936 6860 1.876799 ACGTTTTTGGACGATGCATGA 59.123 42.857 2.46 0.00 45.47 3.07
4937 6861 2.241722 GACGTTTTTGGACGATGCATG 58.758 47.619 2.46 0.00 45.47 4.06
4938 6862 1.136085 CGACGTTTTTGGACGATGCAT 60.136 47.619 0.00 0.00 45.47 3.96
4939 6863 0.233590 CGACGTTTTTGGACGATGCA 59.766 50.000 4.29 0.00 45.47 3.96
4940 6864 0.233848 ACGACGTTTTTGGACGATGC 59.766 50.000 4.29 0.00 45.47 3.91
4941 6865 1.259507 ACACGACGTTTTTGGACGATG 59.740 47.619 0.00 2.74 45.47 3.84
4942 6866 1.259507 CACACGACGTTTTTGGACGAT 59.740 47.619 0.00 0.00 45.47 3.73
4943 6867 0.646381 CACACGACGTTTTTGGACGA 59.354 50.000 0.00 0.00 45.47 4.20
4945 6869 3.865224 ATACACACGACGTTTTTGGAC 57.135 42.857 0.00 0.00 0.00 4.02
4946 6870 3.429543 GCTATACACACGACGTTTTTGGA 59.570 43.478 0.00 0.00 0.00 3.53
4947 6871 3.184783 TGCTATACACACGACGTTTTTGG 59.815 43.478 0.00 0.00 0.00 3.28
4948 6872 4.377911 TGCTATACACACGACGTTTTTG 57.622 40.909 0.00 0.00 0.00 2.44
4949 6873 3.120786 GCTGCTATACACACGACGTTTTT 60.121 43.478 0.00 0.00 0.00 1.94
4950 6874 2.410730 GCTGCTATACACACGACGTTTT 59.589 45.455 0.00 0.00 0.00 2.43
4951 6875 1.990563 GCTGCTATACACACGACGTTT 59.009 47.619 0.00 0.00 0.00 3.60
4952 6876 1.201647 AGCTGCTATACACACGACGTT 59.798 47.619 0.00 0.00 0.00 3.99
4953 6877 0.809385 AGCTGCTATACACACGACGT 59.191 50.000 0.00 0.00 0.00 4.34
4954 6878 1.064208 AGAGCTGCTATACACACGACG 59.936 52.381 0.15 0.00 0.00 5.12
4955 6879 2.541999 GGAGAGCTGCTATACACACGAC 60.542 54.545 0.15 0.00 0.00 4.34
4956 6880 1.676529 GGAGAGCTGCTATACACACGA 59.323 52.381 0.15 0.00 0.00 4.35
4957 6881 1.598183 CGGAGAGCTGCTATACACACG 60.598 57.143 7.36 0.00 0.00 4.49
4958 6882 1.866063 GCGGAGAGCTGCTATACACAC 60.866 57.143 7.36 0.00 43.23 3.82
4959 6883 0.385751 GCGGAGAGCTGCTATACACA 59.614 55.000 7.36 0.00 43.23 3.72
4960 6884 0.661780 CGCGGAGAGCTGCTATACAC 60.662 60.000 7.36 0.00 44.41 2.90
4961 6885 1.654774 CGCGGAGAGCTGCTATACA 59.345 57.895 7.36 0.00 44.41 2.29
4962 6886 4.542890 CGCGGAGAGCTGCTATAC 57.457 61.111 0.15 0.00 44.41 1.47
4977 6901 2.306255 TAACTTCCCGGGATCTGCGC 62.306 60.000 27.48 0.00 0.00 6.09
4978 6902 0.177141 TTAACTTCCCGGGATCTGCG 59.823 55.000 27.48 12.98 0.00 5.18
4979 6903 1.065709 TGTTAACTTCCCGGGATCTGC 60.066 52.381 27.48 13.23 0.00 4.26
4980 6904 3.343941 TTGTTAACTTCCCGGGATCTG 57.656 47.619 27.48 19.68 0.00 2.90
4992 6916 4.200874 TGTGATGGTTCCGTTTGTTAACT 58.799 39.130 7.22 0.00 31.89 2.24
4994 6918 4.557695 GCATGTGATGGTTCCGTTTGTTAA 60.558 41.667 0.00 0.00 0.00 2.01
4995 6919 3.057876 GCATGTGATGGTTCCGTTTGTTA 60.058 43.478 0.00 0.00 0.00 2.41
4996 6920 2.288152 GCATGTGATGGTTCCGTTTGTT 60.288 45.455 0.00 0.00 0.00 2.83
4997 6921 1.269448 GCATGTGATGGTTCCGTTTGT 59.731 47.619 0.00 0.00 0.00 2.83
4998 6922 1.728825 CGCATGTGATGGTTCCGTTTG 60.729 52.381 0.00 0.00 0.00 2.93
4999 6923 0.521291 CGCATGTGATGGTTCCGTTT 59.479 50.000 0.00 0.00 0.00 3.60
5000 6924 1.922135 GCGCATGTGATGGTTCCGTT 61.922 55.000 11.26 0.00 0.00 4.44
5002 6926 1.717791 ATGCGCATGTGATGGTTCCG 61.718 55.000 24.69 0.00 0.00 4.30
5115 7462 1.970114 CCCATGCCGATGCCATCTC 60.970 63.158 2.75 0.00 36.33 2.75
5143 7490 0.842030 TGATTCTGTGGCCTGGGTCT 60.842 55.000 3.32 0.00 0.00 3.85
5144 7491 0.393537 CTGATTCTGTGGCCTGGGTC 60.394 60.000 3.32 0.00 0.00 4.46
5166 7513 2.484264 CTCGTGTCCATCCTTGGTTTTC 59.516 50.000 0.00 0.00 44.06 2.29
5178 7525 0.034337 GCCCTTGTTACTCGTGTCCA 59.966 55.000 0.00 0.00 0.00 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.