Multiple sequence alignment - TraesCS7B01G421800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G421800 chr7B 100.000 4912 0 0 1 4912 690872374 690867463 0.000000e+00 9071.0
1 TraesCS7B01G421800 chr7D 89.699 4689 252 84 348 4912 606648403 606643822 0.000000e+00 5770.0
2 TraesCS7B01G421800 chr7D 100.000 28 0 0 4147 4174 32873555 32873528 9.000000e-03 52.8
3 TraesCS7B01G421800 chr7A 89.117 4521 284 74 481 4912 698691113 698686712 0.000000e+00 5432.0
4 TraesCS7B01G421800 chr2B 85.030 167 20 4 1 165 654550821 654550984 1.090000e-36 165.0
5 TraesCS7B01G421800 chr6B 76.803 319 57 14 2844 3151 188668024 188668336 3.930000e-36 163.0
6 TraesCS7B01G421800 chr6B 92.308 39 1 2 288 326 553053399 553053363 2.000000e-03 54.7
7 TraesCS7B01G421800 chr6D 75.466 322 57 14 2844 3151 103002972 103003285 2.380000e-28 137.0
8 TraesCS7B01G421800 chr6A 83.333 108 18 0 3044 3151 124267701 124267808 3.130000e-17 100.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G421800 chr7B 690867463 690872374 4911 True 9071 9071 100.000 1 4912 1 chr7B.!!$R1 4911
1 TraesCS7B01G421800 chr7D 606643822 606648403 4581 True 5770 5770 89.699 348 4912 1 chr7D.!!$R2 4564
2 TraesCS7B01G421800 chr7A 698686712 698691113 4401 True 5432 5432 89.117 481 4912 1 chr7A.!!$R1 4431

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
178 179 0.029300 GCGCTGCAAGAACACAAGAA 59.971 50.0 0.00 0.00 34.07 2.52 F
1683 1793 0.035056 CAGGTTCAGGTAAGGGCCAG 60.035 60.0 6.18 0.00 0.00 4.85 F
1685 1795 0.322546 GGTTCAGGTAAGGGCCAGTG 60.323 60.0 6.18 0.00 0.00 3.66 F
3305 3446 0.031178 ACGTCTACGCGTTTGGAGTT 59.969 50.0 20.78 0.78 43.04 3.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1787 1897 0.035056 AGAGGAGTTGGAATTGGGCG 60.035 55.0 0.00 0.00 0.00 6.13 R
3275 3416 0.314418 CGTAGACGTCGCTCTTCTCG 60.314 60.0 10.46 3.99 34.11 4.04 R
3400 3541 0.324943 TGCCCTGGTAAGTTGAGAGC 59.675 55.0 0.00 0.00 0.00 4.09 R
4661 4819 0.041090 TGGGAAATGAAAGAGGGGGC 59.959 55.0 0.00 0.00 0.00 5.80 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.915437 AGCCCAAACAAAACATACGAG 57.085 42.857 0.00 0.00 0.00 4.18
22 23 3.482436 AGCCCAAACAAAACATACGAGA 58.518 40.909 0.00 0.00 0.00 4.04
23 24 3.886505 AGCCCAAACAAAACATACGAGAA 59.113 39.130 0.00 0.00 0.00 2.87
24 25 4.339814 AGCCCAAACAAAACATACGAGAAA 59.660 37.500 0.00 0.00 0.00 2.52
25 26 4.679654 GCCCAAACAAAACATACGAGAAAG 59.320 41.667 0.00 0.00 0.00 2.62
26 27 5.219633 CCCAAACAAAACATACGAGAAAGG 58.780 41.667 0.00 0.00 0.00 3.11
27 28 4.679654 CCAAACAAAACATACGAGAAAGGC 59.320 41.667 0.00 0.00 0.00 4.35
28 29 5.277825 CAAACAAAACATACGAGAAAGGCA 58.722 37.500 0.00 0.00 0.00 4.75
29 30 5.705609 AACAAAACATACGAGAAAGGCAT 57.294 34.783 0.00 0.00 0.00 4.40
30 31 5.705609 ACAAAACATACGAGAAAGGCATT 57.294 34.783 0.00 0.00 0.00 3.56
31 32 6.811253 ACAAAACATACGAGAAAGGCATTA 57.189 33.333 0.00 0.00 0.00 1.90
32 33 7.209471 ACAAAACATACGAGAAAGGCATTAA 57.791 32.000 0.00 0.00 0.00 1.40
33 34 7.653647 ACAAAACATACGAGAAAGGCATTAAA 58.346 30.769 0.00 0.00 0.00 1.52
34 35 8.138712 ACAAAACATACGAGAAAGGCATTAAAA 58.861 29.630 0.00 0.00 0.00 1.52
35 36 8.973378 CAAAACATACGAGAAAGGCATTAAAAA 58.027 29.630 0.00 0.00 0.00 1.94
53 54 2.435372 AAAAGACCACCAAGTGCTCA 57.565 45.000 0.00 0.00 31.34 4.26
54 55 1.680338 AAAGACCACCAAGTGCTCAC 58.320 50.000 0.00 0.00 31.34 3.51
55 56 0.179018 AAGACCACCAAGTGCTCACC 60.179 55.000 0.00 0.00 31.34 4.02
56 57 1.148273 GACCACCAAGTGCTCACCA 59.852 57.895 0.00 0.00 31.34 4.17
57 58 1.152963 ACCACCAAGTGCTCACCAC 60.153 57.895 0.00 0.00 45.01 4.16
65 66 2.559785 GTGCTCACCACATCAAGGG 58.440 57.895 0.00 0.00 44.06 3.95
81 82 4.593864 GGGCGCCGGAGAAGCTAG 62.594 72.222 22.54 0.00 0.00 3.42
82 83 3.839432 GGCGCCGGAGAAGCTAGT 61.839 66.667 12.58 0.00 0.00 2.57
83 84 2.278923 GCGCCGGAGAAGCTAGTC 60.279 66.667 10.31 0.00 0.00 2.59
84 85 3.064987 GCGCCGGAGAAGCTAGTCA 62.065 63.158 10.31 0.00 0.00 3.41
85 86 1.511305 CGCCGGAGAAGCTAGTCAA 59.489 57.895 5.05 0.00 0.00 3.18
86 87 0.802607 CGCCGGAGAAGCTAGTCAAC 60.803 60.000 5.05 0.00 0.00 3.18
87 88 0.802607 GCCGGAGAAGCTAGTCAACG 60.803 60.000 5.05 0.00 0.00 4.10
88 89 0.179134 CCGGAGAAGCTAGTCAACGG 60.179 60.000 0.00 6.45 34.32 4.44
89 90 0.179134 CGGAGAAGCTAGTCAACGGG 60.179 60.000 0.00 0.00 0.00 5.28
90 91 0.460459 GGAGAAGCTAGTCAACGGGC 60.460 60.000 0.00 0.00 0.00 6.13
91 92 0.460459 GAGAAGCTAGTCAACGGGCC 60.460 60.000 0.00 0.00 0.00 5.80
92 93 1.810030 GAAGCTAGTCAACGGGCCG 60.810 63.158 27.06 27.06 0.00 6.13
93 94 2.221906 GAAGCTAGTCAACGGGCCGA 62.222 60.000 35.78 7.50 0.00 5.54
94 95 2.202756 GCTAGTCAACGGGCCGAG 60.203 66.667 35.78 23.99 0.00 4.63
95 96 2.494918 CTAGTCAACGGGCCGAGG 59.505 66.667 35.78 23.30 0.00 4.63
96 97 3.718210 CTAGTCAACGGGCCGAGGC 62.718 68.421 35.78 25.21 41.06 4.70
111 112 2.045536 GGCCTGAAGTGCCTCCAG 60.046 66.667 0.00 0.00 45.70 3.86
112 113 2.749441 GCCTGAAGTGCCTCCAGC 60.749 66.667 0.00 0.00 44.14 4.85
123 124 4.559063 CTCCAGCATCCGCCCCAG 62.559 72.222 0.00 0.00 39.83 4.45
142 143 2.825836 CGCACCTGGCCCATTCTC 60.826 66.667 0.00 0.00 40.31 2.87
143 144 2.679716 GCACCTGGCCCATTCTCT 59.320 61.111 0.00 0.00 36.11 3.10
144 145 1.915228 GCACCTGGCCCATTCTCTA 59.085 57.895 0.00 0.00 36.11 2.43
145 146 0.179034 GCACCTGGCCCATTCTCTAG 60.179 60.000 0.00 0.00 36.11 2.43
146 147 0.179034 CACCTGGCCCATTCTCTAGC 60.179 60.000 0.00 0.00 0.00 3.42
147 148 1.348775 ACCTGGCCCATTCTCTAGCC 61.349 60.000 0.00 0.00 45.96 3.93
150 151 3.641017 GGCCCATTCTCTAGCCATC 57.359 57.895 0.00 0.00 45.07 3.51
151 152 0.321122 GGCCCATTCTCTAGCCATCG 60.321 60.000 0.00 0.00 45.07 3.84
152 153 0.321122 GCCCATTCTCTAGCCATCGG 60.321 60.000 0.00 0.00 0.00 4.18
153 154 0.322975 CCCATTCTCTAGCCATCGGG 59.677 60.000 0.00 0.00 37.18 5.14
154 155 1.051812 CCATTCTCTAGCCATCGGGT 58.948 55.000 0.00 0.00 37.19 5.28
155 156 1.270518 CCATTCTCTAGCCATCGGGTG 60.271 57.143 0.00 0.00 34.28 4.61
156 157 0.394565 ATTCTCTAGCCATCGGGTGC 59.605 55.000 0.00 0.00 34.28 5.01
157 158 1.686325 TTCTCTAGCCATCGGGTGCC 61.686 60.000 0.00 0.00 34.28 5.01
158 159 2.364973 TCTAGCCATCGGGTGCCA 60.365 61.111 0.00 0.00 34.28 4.92
159 160 2.109799 CTAGCCATCGGGTGCCAG 59.890 66.667 0.00 0.00 34.28 4.85
160 161 4.175337 TAGCCATCGGGTGCCAGC 62.175 66.667 0.00 0.00 34.28 4.85
170 171 3.663176 GTGCCAGCGCTGCAAGAA 61.663 61.111 31.96 10.57 41.06 2.52
171 172 3.663176 TGCCAGCGCTGCAAGAAC 61.663 61.111 31.96 15.42 35.40 3.01
172 173 3.663176 GCCAGCGCTGCAAGAACA 61.663 61.111 31.96 0.00 34.07 3.18
173 174 2.253452 CCAGCGCTGCAAGAACAC 59.747 61.111 31.96 0.00 34.07 3.32
174 175 2.545596 CCAGCGCTGCAAGAACACA 61.546 57.895 31.96 0.00 34.07 3.72
175 176 1.356270 CAGCGCTGCAAGAACACAA 59.644 52.632 26.68 0.00 34.07 3.33
176 177 0.659417 CAGCGCTGCAAGAACACAAG 60.659 55.000 26.68 0.00 34.07 3.16
177 178 0.815213 AGCGCTGCAAGAACACAAGA 60.815 50.000 10.39 0.00 34.07 3.02
178 179 0.029300 GCGCTGCAAGAACACAAGAA 59.971 50.000 0.00 0.00 34.07 2.52
179 180 1.533756 GCGCTGCAAGAACACAAGAAA 60.534 47.619 0.00 0.00 34.07 2.52
180 181 2.859806 GCGCTGCAAGAACACAAGAAAT 60.860 45.455 0.00 0.00 34.07 2.17
181 182 3.374745 CGCTGCAAGAACACAAGAAATT 58.625 40.909 0.00 0.00 34.07 1.82
182 183 3.180980 CGCTGCAAGAACACAAGAAATTG 59.819 43.478 0.00 0.00 34.07 2.32
183 184 4.362279 GCTGCAAGAACACAAGAAATTGA 58.638 39.130 0.00 0.00 34.07 2.57
184 185 4.805192 GCTGCAAGAACACAAGAAATTGAA 59.195 37.500 0.00 0.00 34.07 2.69
185 186 5.051240 GCTGCAAGAACACAAGAAATTGAAG 60.051 40.000 0.00 0.00 34.07 3.02
186 187 6.206395 TGCAAGAACACAAGAAATTGAAGA 57.794 33.333 0.00 0.00 0.00 2.87
187 188 6.629128 TGCAAGAACACAAGAAATTGAAGAA 58.371 32.000 0.00 0.00 0.00 2.52
188 189 7.095910 TGCAAGAACACAAGAAATTGAAGAAA 58.904 30.769 0.00 0.00 0.00 2.52
189 190 7.765360 TGCAAGAACACAAGAAATTGAAGAAAT 59.235 29.630 0.00 0.00 0.00 2.17
190 191 9.248291 GCAAGAACACAAGAAATTGAAGAAATA 57.752 29.630 0.00 0.00 0.00 1.40
194 195 9.950680 GAACACAAGAAATTGAAGAAATAGTCA 57.049 29.630 0.00 0.00 0.00 3.41
195 196 9.956720 AACACAAGAAATTGAAGAAATAGTCAG 57.043 29.630 0.00 0.00 0.00 3.51
196 197 9.342308 ACACAAGAAATTGAAGAAATAGTCAGA 57.658 29.630 0.00 0.00 0.00 3.27
197 198 9.823098 CACAAGAAATTGAAGAAATAGTCAGAG 57.177 33.333 0.00 0.00 0.00 3.35
198 199 9.784531 ACAAGAAATTGAAGAAATAGTCAGAGA 57.215 29.630 0.00 0.00 0.00 3.10
200 201 8.785329 AGAAATTGAAGAAATAGTCAGAGACC 57.215 34.615 0.00 0.00 32.18 3.85
201 202 7.826744 AGAAATTGAAGAAATAGTCAGAGACCC 59.173 37.037 0.00 0.00 32.18 4.46
202 203 4.720649 TGAAGAAATAGTCAGAGACCCG 57.279 45.455 0.00 0.00 32.18 5.28
203 204 4.087182 TGAAGAAATAGTCAGAGACCCGT 58.913 43.478 0.00 0.00 32.18 5.28
204 205 4.082190 TGAAGAAATAGTCAGAGACCCGTG 60.082 45.833 0.00 0.00 32.18 4.94
205 206 3.698289 AGAAATAGTCAGAGACCCGTGA 58.302 45.455 0.00 0.00 32.18 4.35
206 207 4.282496 AGAAATAGTCAGAGACCCGTGAT 58.718 43.478 0.00 0.00 32.18 3.06
207 208 4.339814 AGAAATAGTCAGAGACCCGTGATC 59.660 45.833 0.00 0.00 32.18 2.92
208 209 2.801077 TAGTCAGAGACCCGTGATCA 57.199 50.000 0.00 0.00 32.18 2.92
209 210 1.178276 AGTCAGAGACCCGTGATCAC 58.822 55.000 16.21 16.21 32.18 3.06
210 211 0.173708 GTCAGAGACCCGTGATCACC 59.826 60.000 20.03 6.01 0.00 4.02
211 212 0.251608 TCAGAGACCCGTGATCACCA 60.252 55.000 20.03 0.00 0.00 4.17
212 213 0.826715 CAGAGACCCGTGATCACCAT 59.173 55.000 20.03 5.58 0.00 3.55
213 214 1.115467 AGAGACCCGTGATCACCATC 58.885 55.000 20.03 14.10 0.00 3.51
214 215 1.115467 GAGACCCGTGATCACCATCT 58.885 55.000 20.03 18.23 0.00 2.90
215 216 1.482593 GAGACCCGTGATCACCATCTT 59.517 52.381 20.03 3.52 0.00 2.40
216 217 2.693591 GAGACCCGTGATCACCATCTTA 59.306 50.000 20.03 0.00 0.00 2.10
217 218 2.431057 AGACCCGTGATCACCATCTTAC 59.569 50.000 20.03 5.74 0.00 2.34
218 219 1.485066 ACCCGTGATCACCATCTTACC 59.515 52.381 20.03 0.00 0.00 2.85
219 220 1.762957 CCCGTGATCACCATCTTACCT 59.237 52.381 20.03 0.00 0.00 3.08
220 221 2.483714 CCCGTGATCACCATCTTACCTG 60.484 54.545 20.03 1.91 0.00 4.00
221 222 2.483714 CCGTGATCACCATCTTACCTGG 60.484 54.545 20.03 7.41 39.80 4.45
222 223 2.430694 CGTGATCACCATCTTACCTGGA 59.569 50.000 20.03 0.00 37.22 3.86
223 224 3.491619 CGTGATCACCATCTTACCTGGAG 60.492 52.174 20.03 0.00 37.22 3.86
224 225 3.041211 TGATCACCATCTTACCTGGAGG 58.959 50.000 0.00 0.00 37.22 4.30
225 226 1.204146 TCACCATCTTACCTGGAGGC 58.796 55.000 0.00 0.00 39.32 4.70
226 227 0.181350 CACCATCTTACCTGGAGGCC 59.819 60.000 0.00 0.00 39.32 5.19
227 228 1.338136 ACCATCTTACCTGGAGGCCG 61.338 60.000 0.00 0.00 39.32 6.13
228 229 1.447643 CATCTTACCTGGAGGCCGG 59.552 63.158 0.00 0.00 39.32 6.13
242 243 3.439540 CCGGGCCGACATTTGGTG 61.440 66.667 30.79 2.47 0.00 4.17
243 244 4.114997 CGGGCCGACATTTGGTGC 62.115 66.667 24.41 0.00 0.00 5.01
244 245 2.988684 GGGCCGACATTTGGTGCA 60.989 61.111 0.00 0.00 0.00 4.57
245 246 2.350458 GGGCCGACATTTGGTGCAT 61.350 57.895 0.00 0.00 0.00 3.96
246 247 1.153784 GGCCGACATTTGGTGCATG 60.154 57.895 0.00 0.00 0.00 4.06
247 248 1.806758 GCCGACATTTGGTGCATGC 60.807 57.895 11.82 11.82 0.00 4.06
248 249 1.514657 CCGACATTTGGTGCATGCG 60.515 57.895 14.09 0.00 0.00 4.73
249 250 1.514657 CGACATTTGGTGCATGCGG 60.515 57.895 14.09 0.00 0.00 5.69
250 251 1.586028 GACATTTGGTGCATGCGGT 59.414 52.632 14.09 2.13 0.00 5.68
251 252 0.038343 GACATTTGGTGCATGCGGTT 60.038 50.000 14.09 0.00 0.00 4.44
252 253 1.201181 GACATTTGGTGCATGCGGTTA 59.799 47.619 14.09 0.00 0.00 2.85
253 254 1.202114 ACATTTGGTGCATGCGGTTAG 59.798 47.619 14.09 2.09 0.00 2.34
254 255 1.472082 CATTTGGTGCATGCGGTTAGA 59.528 47.619 14.09 0.00 0.00 2.10
255 256 0.878416 TTTGGTGCATGCGGTTAGAC 59.122 50.000 14.09 3.98 0.00 2.59
256 257 1.295357 TTGGTGCATGCGGTTAGACG 61.295 55.000 14.09 0.00 0.00 4.18
257 258 2.461110 GGTGCATGCGGTTAGACGG 61.461 63.158 14.09 0.00 0.00 4.79
258 259 2.817834 TGCATGCGGTTAGACGGC 60.818 61.111 14.09 3.97 43.63 5.68
259 260 3.573491 GCATGCGGTTAGACGGCC 61.573 66.667 0.00 0.00 42.83 6.13
264 265 4.867599 CGGTTAGACGGCCGGCTC 62.868 72.222 42.14 25.55 43.85 4.70
265 266 3.459063 GGTTAGACGGCCGGCTCT 61.459 66.667 42.14 29.48 34.01 4.09
266 267 2.104530 GTTAGACGGCCGGCTCTC 59.895 66.667 42.14 27.65 34.01 3.20
267 268 3.515286 TTAGACGGCCGGCTCTCG 61.515 66.667 42.14 23.74 34.01 4.04
268 269 4.790962 TAGACGGCCGGCTCTCGT 62.791 66.667 42.14 27.04 39.99 4.18
275 276 4.778415 CCGGCTCTCGTGTCCGTG 62.778 72.222 15.49 7.25 41.46 4.94
277 278 4.357947 GGCTCTCGTGTCCGTGCA 62.358 66.667 0.00 0.00 35.01 4.57
278 279 2.125912 GCTCTCGTGTCCGTGCAT 60.126 61.111 0.00 0.00 35.01 3.96
279 280 2.447887 GCTCTCGTGTCCGTGCATG 61.448 63.158 0.00 0.00 35.01 4.06
280 281 1.080501 CTCTCGTGTCCGTGCATGT 60.081 57.895 4.96 0.00 35.01 3.21
281 282 1.347097 CTCTCGTGTCCGTGCATGTG 61.347 60.000 4.96 0.00 35.01 3.21
282 283 2.356913 TCGTGTCCGTGCATGTGG 60.357 61.111 4.96 0.40 35.01 4.17
283 284 2.356913 CGTGTCCGTGCATGTGGA 60.357 61.111 4.96 3.08 0.00 4.02
284 285 1.741401 CGTGTCCGTGCATGTGGAT 60.741 57.895 4.96 0.00 36.48 3.41
285 286 1.796151 GTGTCCGTGCATGTGGATG 59.204 57.895 4.96 0.00 36.48 3.51
304 305 3.455685 GTCCGCGGACGTTTAGTG 58.544 61.111 39.77 3.67 37.70 2.74
305 306 1.372128 GTCCGCGGACGTTTAGTGT 60.372 57.895 39.77 0.00 37.70 3.55
306 307 1.372004 TCCGCGGACGTTTAGTGTG 60.372 57.895 27.28 0.00 37.70 3.82
307 308 1.662446 CCGCGGACGTTTAGTGTGT 60.662 57.895 24.07 0.00 37.70 3.72
308 309 1.611592 CCGCGGACGTTTAGTGTGTC 61.612 60.000 24.07 0.00 37.70 3.67
309 310 1.611592 CGCGGACGTTTAGTGTGTCC 61.612 60.000 0.00 0.55 46.91 4.02
311 312 3.871775 GGACGTTTAGTGTGTCCGA 57.128 52.632 0.00 0.00 42.42 4.55
312 313 2.358939 GGACGTTTAGTGTGTCCGAT 57.641 50.000 0.00 0.00 42.42 4.18
313 314 2.680577 GGACGTTTAGTGTGTCCGATT 58.319 47.619 0.00 0.00 42.42 3.34
314 315 3.062042 GGACGTTTAGTGTGTCCGATTT 58.938 45.455 0.00 0.00 42.42 2.17
315 316 4.236935 GGACGTTTAGTGTGTCCGATTTA 58.763 43.478 0.00 0.00 42.42 1.40
316 317 4.325472 GGACGTTTAGTGTGTCCGATTTAG 59.675 45.833 0.00 0.00 42.42 1.85
317 318 4.240096 ACGTTTAGTGTGTCCGATTTAGG 58.760 43.478 0.00 0.00 0.00 2.69
318 319 4.022068 ACGTTTAGTGTGTCCGATTTAGGA 60.022 41.667 0.00 0.00 38.11 2.94
319 320 5.107133 CGTTTAGTGTGTCCGATTTAGGAT 58.893 41.667 0.00 0.00 43.04 3.24
320 321 5.005394 CGTTTAGTGTGTCCGATTTAGGATG 59.995 44.000 0.00 0.00 43.04 3.51
321 322 2.906354 AGTGTGTCCGATTTAGGATGC 58.094 47.619 0.00 0.00 43.04 3.91
322 323 1.593006 GTGTGTCCGATTTAGGATGCG 59.407 52.381 0.00 0.00 43.04 4.73
323 324 1.206132 TGTGTCCGATTTAGGATGCGT 59.794 47.619 0.00 0.00 43.04 5.24
324 325 1.859080 GTGTCCGATTTAGGATGCGTC 59.141 52.381 0.00 0.00 43.04 5.19
325 326 1.129326 GTCCGATTTAGGATGCGTCG 58.871 55.000 0.00 0.00 43.04 5.12
326 327 2.517598 CCGATTTAGGATGCGTCGG 58.482 57.895 0.00 8.41 44.72 4.79
327 328 3.562639 CGATTTAGGATGCGTCGGA 57.437 52.632 0.00 0.00 0.00 4.55
328 329 1.409412 CGATTTAGGATGCGTCGGAG 58.591 55.000 0.00 0.00 0.00 4.63
329 330 1.001706 CGATTTAGGATGCGTCGGAGA 60.002 52.381 0.00 0.00 0.00 3.71
330 331 2.351835 CGATTTAGGATGCGTCGGAGAT 60.352 50.000 0.00 0.00 40.67 2.75
332 333 1.399714 TTAGGATGCGTCGGAGATGT 58.600 50.000 0.00 0.00 46.97 3.06
333 334 0.952280 TAGGATGCGTCGGAGATGTC 59.048 55.000 0.00 0.00 46.97 3.06
334 335 1.300233 GGATGCGTCGGAGATGTCC 60.300 63.158 0.00 0.00 46.97 4.02
335 336 1.736586 GATGCGTCGGAGATGTCCT 59.263 57.895 7.39 0.00 46.97 3.85
336 337 0.318275 GATGCGTCGGAGATGTCCTC 60.318 60.000 7.39 0.00 46.97 3.71
337 338 1.037579 ATGCGTCGGAGATGTCCTCA 61.038 55.000 7.39 0.39 46.97 3.86
338 339 1.226717 GCGTCGGAGATGTCCTCAC 60.227 63.158 7.39 2.76 46.97 3.51
339 340 1.433879 CGTCGGAGATGTCCTCACC 59.566 63.158 7.39 0.00 43.76 4.02
343 344 1.433879 GGAGATGTCCTCACCGACG 59.566 63.158 0.54 0.00 43.76 5.12
344 345 1.433879 GAGATGTCCTCACCGACGG 59.566 63.158 13.61 13.61 41.58 4.79
345 346 2.202756 GATGTCCTCACCGACGGC 60.203 66.667 15.39 0.00 35.40 5.68
346 347 2.680352 ATGTCCTCACCGACGGCT 60.680 61.111 15.39 0.00 35.40 5.52
356 357 0.037160 ACCGACGGCTTGGGTAAAAT 59.963 50.000 15.39 0.00 30.76 1.82
358 359 1.131693 CCGACGGCTTGGGTAAAATTC 59.868 52.381 0.00 0.00 0.00 2.17
360 361 1.808343 GACGGCTTGGGTAAAATTCGT 59.192 47.619 0.00 0.00 0.00 3.85
363 364 3.239254 CGGCTTGGGTAAAATTCGTTTC 58.761 45.455 0.00 0.00 0.00 2.78
364 365 3.239254 GGCTTGGGTAAAATTCGTTTCG 58.761 45.455 0.00 0.00 0.00 3.46
365 366 3.304861 GGCTTGGGTAAAATTCGTTTCGT 60.305 43.478 0.00 0.00 0.00 3.85
378 379 6.570690 ATTCGTTTCGTGAGTATAAAGAGC 57.429 37.500 0.00 0.00 0.00 4.09
379 380 5.306532 TCGTTTCGTGAGTATAAAGAGCT 57.693 39.130 0.00 0.00 0.00 4.09
381 382 4.202558 CGTTTCGTGAGTATAAAGAGCTCG 59.797 45.833 8.37 0.00 32.32 5.03
382 383 4.959596 TTCGTGAGTATAAAGAGCTCGT 57.040 40.909 8.37 1.01 32.32 4.18
406 408 4.262036 GGGGGAAATTATTCGAAATGAGCC 60.262 45.833 0.00 0.00 36.36 4.70
410 412 6.209361 GGAAATTATTCGAAATGAGCCTTCC 58.791 40.000 0.00 5.10 36.36 3.46
419 425 1.388065 ATGAGCCTTCCGAGGAGACG 61.388 60.000 0.00 0.00 46.74 4.18
420 426 1.749638 GAGCCTTCCGAGGAGACGA 60.750 63.158 0.00 0.00 46.74 4.20
423 429 1.104577 GCCTTCCGAGGAGACGAGAT 61.105 60.000 0.00 0.00 46.74 2.75
434 440 3.630769 AGGAGACGAGATATTTGTACGCA 59.369 43.478 0.00 0.00 0.00 5.24
447 453 2.642254 TACGCACCTCAGGAACGGG 61.642 63.158 13.50 5.33 0.00 5.28
455 461 1.608283 CCTCAGGAACGGGTCTTGTTC 60.608 57.143 5.00 0.00 43.87 3.18
462 468 1.292992 ACGGGTCTTGTTCGTTTCAC 58.707 50.000 0.00 0.00 32.95 3.18
645 689 7.350382 TCCTCTGTCATCTCTAAGTACTCAAT 58.650 38.462 0.00 0.00 0.00 2.57
674 723 6.961359 TTGATAAAATCCTCACGTGTACTG 57.039 37.500 16.51 4.68 0.00 2.74
825 874 2.894387 GGCGAGGATGAGTGCTGC 60.894 66.667 0.00 0.00 0.00 5.25
960 1060 1.683943 CAGAGAGAGGGAGAGCAGAG 58.316 60.000 0.00 0.00 0.00 3.35
994 1094 2.070650 GTCAGGGGATAGGCGGGTT 61.071 63.158 0.00 0.00 0.00 4.11
995 1095 2.070039 TCAGGGGATAGGCGGGTTG 61.070 63.158 0.00 0.00 0.00 3.77
996 1096 2.772622 AGGGGATAGGCGGGTTGG 60.773 66.667 0.00 0.00 0.00 3.77
997 1097 4.581093 GGGGATAGGCGGGTTGGC 62.581 72.222 0.00 0.00 45.27 4.52
1039 1139 1.731433 GCATCCATTGCCGCTCATGT 61.731 55.000 0.00 0.00 46.15 3.21
1060 1169 1.502640 CTCTTCTTGCTGCTGCTGC 59.497 57.895 22.51 22.51 40.48 5.25
1061 1170 0.956410 CTCTTCTTGCTGCTGCTGCT 60.956 55.000 27.67 0.00 40.48 4.24
1062 1171 1.210413 CTTCTTGCTGCTGCTGCTG 59.790 57.895 27.67 20.66 40.48 4.41
1261 1370 7.754475 GCATTTCTCCTTTCTTCTTCTGAATTC 59.246 37.037 0.00 0.00 0.00 2.17
1265 1374 6.500049 TCTCCTTTCTTCTTCTGAATTCCTCT 59.500 38.462 2.27 0.00 0.00 3.69
1266 1375 6.471146 TCCTTTCTTCTTCTGAATTCCTCTG 58.529 40.000 2.27 0.00 0.00 3.35
1267 1376 5.123661 CCTTTCTTCTTCTGAATTCCTCTGC 59.876 44.000 2.27 0.00 0.00 4.26
1268 1377 3.854666 TCTTCTTCTGAATTCCTCTGCG 58.145 45.455 2.27 0.00 0.00 5.18
1269 1378 3.259374 TCTTCTTCTGAATTCCTCTGCGT 59.741 43.478 2.27 0.00 0.00 5.24
1270 1379 2.964740 TCTTCTGAATTCCTCTGCGTG 58.035 47.619 2.27 0.00 0.00 5.34
1271 1380 2.300152 TCTTCTGAATTCCTCTGCGTGT 59.700 45.455 2.27 0.00 0.00 4.49
1272 1381 2.084610 TCTGAATTCCTCTGCGTGTG 57.915 50.000 2.27 0.00 0.00 3.82
1273 1382 1.344438 TCTGAATTCCTCTGCGTGTGT 59.656 47.619 2.27 0.00 0.00 3.72
1274 1383 1.462283 CTGAATTCCTCTGCGTGTGTG 59.538 52.381 2.27 0.00 0.00 3.82
1275 1384 1.202639 TGAATTCCTCTGCGTGTGTGT 60.203 47.619 2.27 0.00 0.00 3.72
1276 1385 1.195448 GAATTCCTCTGCGTGTGTGTG 59.805 52.381 0.00 0.00 0.00 3.82
1279 1388 1.521457 CCTCTGCGTGTGTGTGTGT 60.521 57.895 0.00 0.00 0.00 3.72
1302 1411 3.608073 GTGTGTGTGTGTTCTTGCTTTTC 59.392 43.478 0.00 0.00 0.00 2.29
1367 1476 6.377327 TCCTCTGCGAATTTATTTTGGATC 57.623 37.500 0.00 0.00 0.00 3.36
1371 1480 5.007626 TCTGCGAATTTATTTTGGATCGGAG 59.992 40.000 7.96 7.96 45.90 4.63
1398 1507 4.625028 TCTGCATATCTCGGATCTTTGTG 58.375 43.478 0.00 0.00 0.00 3.33
1417 1526 7.964559 TCTTTGTGATTTCATTCTCGCAAATAG 59.035 33.333 10.57 2.71 45.53 1.73
1451 1560 5.464389 ACGATGCGTTTGTTAGTTTTCTACT 59.536 36.000 0.00 0.00 36.35 2.57
1452 1561 6.642131 ACGATGCGTTTGTTAGTTTTCTACTA 59.358 34.615 0.00 0.00 36.35 1.82
1453 1562 7.148853 ACGATGCGTTTGTTAGTTTTCTACTAG 60.149 37.037 0.00 0.00 37.45 2.57
1455 1564 9.132521 GATGCGTTTGTTAGTTTTCTACTAGTA 57.867 33.333 1.89 1.89 40.35 1.82
1457 1566 8.352201 TGCGTTTGTTAGTTTTCTACTAGTAGA 58.648 33.333 25.58 25.58 40.35 2.59
1458 1567 9.351570 GCGTTTGTTAGTTTTCTACTAGTAGAT 57.648 33.333 28.79 18.25 41.37 1.98
1462 1571 8.302515 TGTTAGTTTTCTACTAGTAGATGGGG 57.697 38.462 28.79 5.90 41.37 4.96
1463 1572 8.117956 TGTTAGTTTTCTACTAGTAGATGGGGA 58.882 37.037 28.79 14.02 41.37 4.81
1464 1573 8.975295 GTTAGTTTTCTACTAGTAGATGGGGAA 58.025 37.037 28.79 18.48 41.37 3.97
1465 1574 9.725206 TTAGTTTTCTACTAGTAGATGGGGAAT 57.275 33.333 28.79 15.98 41.37 3.01
1466 1575 8.625467 AGTTTTCTACTAGTAGATGGGGAATT 57.375 34.615 28.79 14.44 41.37 2.17
1498 1607 3.623510 CCCTCCTTTTATTCGACTTCTGC 59.376 47.826 0.00 0.00 0.00 4.26
1542 1651 6.030228 GGATCTCACATTCCGTTCAAATTTC 58.970 40.000 0.00 0.00 0.00 2.17
1544 1653 4.824537 TCTCACATTCCGTTCAAATTTCCA 59.175 37.500 0.00 0.00 0.00 3.53
1641 1751 3.179443 TCCGTTAGAATCCACTGCATC 57.821 47.619 0.00 0.00 0.00 3.91
1674 1784 4.594920 TCAAATCTCTCTTCAGGTTCAGGT 59.405 41.667 0.00 0.00 0.00 4.00
1682 1792 0.474854 TCAGGTTCAGGTAAGGGCCA 60.475 55.000 6.18 0.00 0.00 5.36
1683 1793 0.035056 CAGGTTCAGGTAAGGGCCAG 60.035 60.000 6.18 0.00 0.00 4.85
1684 1794 0.475828 AGGTTCAGGTAAGGGCCAGT 60.476 55.000 6.18 0.00 0.00 4.00
1685 1795 0.322546 GGTTCAGGTAAGGGCCAGTG 60.323 60.000 6.18 0.00 0.00 3.66
1712 1822 5.841237 TCCAAAGATTTTTGATGTAACCCCA 59.159 36.000 10.16 0.00 45.21 4.96
1726 1836 3.934457 AACCCCACAATAAAAAGCTCG 57.066 42.857 0.00 0.00 0.00 5.03
1786 1896 3.615834 GCTTCTTGAAAGAATTGCCCAGG 60.616 47.826 5.97 0.00 43.52 4.45
1787 1897 1.895131 TCTTGAAAGAATTGCCCAGGC 59.105 47.619 0.38 0.38 35.22 4.85
1788 1898 0.602562 TTGAAAGAATTGCCCAGGCG 59.397 50.000 3.83 0.00 45.51 5.52
1790 1900 2.563050 GAAAGAATTGCCCAGGCGCC 62.563 60.000 21.89 21.89 45.51 6.53
1807 1919 1.209504 CGCCCAATTCCAACTCCTCTA 59.790 52.381 0.00 0.00 0.00 2.43
1825 1937 3.253230 TCTATGTGTTGCAGTGATCACG 58.747 45.455 19.85 15.27 36.20 4.35
1955 2067 2.764128 GGTCTCGCCAGATCCCCA 60.764 66.667 0.00 0.00 37.17 4.96
1991 2103 0.980231 GAGACCAGGTCCTGCCTCAT 60.980 60.000 23.78 7.14 46.96 2.90
1992 2104 0.980231 AGACCAGGTCCTGCCTCATC 60.980 60.000 16.72 5.45 46.96 2.92
1993 2105 0.980231 GACCAGGTCCTGCCTCATCT 60.980 60.000 13.99 0.00 46.96 2.90
1994 2106 1.270414 ACCAGGTCCTGCCTCATCTG 61.270 60.000 13.99 0.00 46.96 2.90
1995 2107 1.153208 CAGGTCCTGCCTCATCTGC 60.153 63.158 5.79 0.00 46.96 4.26
1996 2108 2.191641 GGTCCTGCCTCATCTGCC 59.808 66.667 0.00 0.00 0.00 4.85
1997 2109 2.373707 GGTCCTGCCTCATCTGCCT 61.374 63.158 0.00 0.00 0.00 4.75
1998 2110 1.145819 GTCCTGCCTCATCTGCCTC 59.854 63.158 0.00 0.00 0.00 4.70
1999 2111 1.306397 TCCTGCCTCATCTGCCTCA 60.306 57.895 0.00 0.00 0.00 3.86
2010 2122 0.329261 TCTGCCTCACCCTCAATTGG 59.671 55.000 5.42 0.00 0.00 3.16
2013 2125 1.133199 TGCCTCACCCTCAATTGGTTT 60.133 47.619 5.42 0.00 32.46 3.27
2039 2151 4.100707 GCTCATAATTGTGCTTGCTTGA 57.899 40.909 0.00 0.00 38.89 3.02
2044 2159 6.327154 TCATAATTGTGCTTGCTTGAGATTG 58.673 36.000 0.00 0.00 0.00 2.67
2057 2172 2.475155 TGAGATTGAGCCAGACCATCT 58.525 47.619 0.00 0.00 0.00 2.90
2061 2176 2.254152 TTGAGCCAGACCATCTACCT 57.746 50.000 0.00 0.00 0.00 3.08
2082 2205 2.997980 ACACATTGTTCAGACACCACA 58.002 42.857 0.00 0.00 34.98 4.17
2085 2208 3.128415 CACATTGTTCAGACACCACAACA 59.872 43.478 0.00 0.00 34.98 3.33
2088 2211 4.433186 TTGTTCAGACACCACAACAAAG 57.567 40.909 0.00 0.00 36.14 2.77
2253 2376 4.752879 TGCGTCTACAAGGCGGCC 62.753 66.667 12.11 12.11 44.68 6.13
2386 2511 1.136828 AAGTGCTAGTGGTGGGTTCA 58.863 50.000 0.00 0.00 0.00 3.18
2582 2708 2.030274 GTGTGTGTGTATGGCCTTTTCC 60.030 50.000 3.32 0.00 0.00 3.13
2736 2862 1.653151 GACACGGCCAGGTTCTTATC 58.347 55.000 2.24 0.00 0.00 1.75
2741 2867 2.505819 ACGGCCAGGTTCTTATCATCTT 59.494 45.455 2.24 0.00 0.00 2.40
2748 2874 8.103305 GGCCAGGTTCTTATCATCTTATAATCA 58.897 37.037 0.00 0.00 0.00 2.57
2973 3111 7.106439 TGCTTCAACTTTTCATTAAGGTCAA 57.894 32.000 0.00 0.00 0.00 3.18
3090 3229 4.023707 GTGACAAGTGGGAATCTTGACAAG 60.024 45.833 9.03 9.03 44.03 3.16
3153 3292 4.227538 CCGAGTACTTATTAGATGGTGCG 58.772 47.826 0.00 0.00 0.00 5.34
3155 3294 3.988517 GAGTACTTATTAGATGGTGCGGC 59.011 47.826 0.00 0.00 0.00 6.53
3156 3295 3.386726 AGTACTTATTAGATGGTGCGGCA 59.613 43.478 0.00 0.00 0.00 5.69
3157 3296 3.492102 ACTTATTAGATGGTGCGGCAT 57.508 42.857 5.72 0.00 0.00 4.40
3167 3306 0.667184 GGTGCGGCATTCCTTTTGTG 60.667 55.000 5.72 0.00 0.00 3.33
3176 3315 5.179182 CGGCATTCCTTTTGTGCTAAAATTT 59.821 36.000 0.00 0.00 38.83 1.82
3213 3354 6.795593 GTGTTACGAAATTTAAGCTCTGAACC 59.204 38.462 0.00 0.00 0.00 3.62
3231 3372 3.643159 ACCGCAAAATTCTCCTTTCAC 57.357 42.857 0.00 0.00 0.00 3.18
3244 3385 9.533831 AATTCTCCTTTCACCATGTAACTATTT 57.466 29.630 0.00 0.00 0.00 1.40
3249 3390 6.238374 CCTTTCACCATGTAACTATTTAGCGG 60.238 42.308 0.00 0.00 0.00 5.52
3252 3393 2.478894 CCATGTAACTATTTAGCGGCCG 59.521 50.000 24.05 24.05 0.00 6.13
3302 3443 1.440850 CGACGTCTACGCGTTTGGA 60.441 57.895 20.78 11.25 45.79 3.53
3305 3446 0.031178 ACGTCTACGCGTTTGGAGTT 59.969 50.000 20.78 0.78 43.04 3.01
3308 3449 1.862827 GTCTACGCGTTTGGAGTTGTT 59.137 47.619 20.78 0.00 0.00 2.83
3321 3462 4.411927 TGGAGTTGTTCTTCTAGAGCTCT 58.588 43.478 22.17 22.17 0.00 4.09
3329 3470 3.303938 TCTTCTAGAGCTCTTGATGGGG 58.696 50.000 28.13 18.83 0.00 4.96
3400 3541 5.125900 TGTCATGGGTAATCTGCATTTCTTG 59.874 40.000 0.00 0.00 0.00 3.02
3415 3561 5.936054 CATTTCTTGCTCTCAACTTACCAG 58.064 41.667 0.00 0.00 0.00 4.00
3429 3575 3.069729 ACTTACCAGGGCATCGAGTAATC 59.930 47.826 0.00 0.00 0.00 1.75
3430 3576 1.794714 ACCAGGGCATCGAGTAATCT 58.205 50.000 0.00 0.00 0.00 2.40
3432 3578 2.894126 ACCAGGGCATCGAGTAATCTAG 59.106 50.000 0.00 0.00 0.00 2.43
3458 3604 9.862585 GTTGGATTTCACAATTTGATTAACAAC 57.137 29.630 2.79 6.05 38.29 3.32
3461 3607 8.925700 GGATTTCACAATTTGATTAACAACCTC 58.074 33.333 2.79 0.00 38.29 3.85
3462 3608 8.831715 ATTTCACAATTTGATTAACAACCTCC 57.168 30.769 2.79 0.00 38.29 4.30
3475 3621 2.233186 ACAACCTCCGGAAGTAACTAGC 59.767 50.000 6.03 0.00 0.00 3.42
3497 3643 7.992754 AGCTCTCTTTCAGTGTTCATATTTT 57.007 32.000 0.00 0.00 0.00 1.82
3501 3647 9.604626 CTCTCTTTCAGTGTTCATATTTTTGTC 57.395 33.333 0.00 0.00 0.00 3.18
3506 3652 6.676950 TCAGTGTTCATATTTTTGTCGCAAT 58.323 32.000 0.00 0.00 0.00 3.56
3508 3654 7.962373 TCAGTGTTCATATTTTTGTCGCAATAG 59.038 33.333 0.00 0.00 0.00 1.73
3812 3958 2.656560 ACAGACCGCTGATAACAGAC 57.343 50.000 3.85 0.00 46.03 3.51
3824 3970 3.192844 TGATAACAGACGTTCTCCACTCC 59.807 47.826 0.00 0.00 36.52 3.85
3839 3985 2.257207 CACTCCCTTGTTCCTCTGGTA 58.743 52.381 0.00 0.00 0.00 3.25
3948 4095 2.858158 CGTCGAAACGGGGAAAGC 59.142 61.111 0.00 0.00 45.21 3.51
4027 4174 2.550423 CCTGCTGCTTATCTGAGGATGG 60.550 54.545 0.00 0.00 33.71 3.51
4049 4196 2.749441 GAGCTCCAACCTGCTGCC 60.749 66.667 0.87 0.00 39.91 4.85
4050 4197 3.255397 AGCTCCAACCTGCTGCCT 61.255 61.111 0.00 0.00 38.21 4.75
4051 4198 3.060615 GCTCCAACCTGCTGCCTG 61.061 66.667 0.00 0.00 0.00 4.85
4052 4199 3.060615 CTCCAACCTGCTGCCTGC 61.061 66.667 0.00 0.00 43.25 4.85
4134 4281 4.768145 TCATGTACAAAGAAACGAAAGCG 58.232 39.130 0.00 0.00 44.79 4.68
4188 4335 3.005684 TGCTGTGCAGATCCGAAATTTTT 59.994 39.130 3.02 0.00 33.32 1.94
4203 4350 5.004345 CGAAATTTTTCACACACTGTTGTCC 59.996 40.000 4.12 0.00 37.01 4.02
4205 4352 2.498644 TTTCACACACTGTTGTCCCA 57.501 45.000 0.00 0.00 31.66 4.37
4270 4427 6.128445 CCTCAACAGTTCTGTTTACTGCATAG 60.128 42.308 14.43 2.46 45.38 2.23
4359 4516 2.428171 GGCAGGTGCACATGTTCATATT 59.572 45.455 29.89 0.00 44.36 1.28
4367 4524 3.254166 GCACATGTTCATATTAGGCAGGG 59.746 47.826 0.00 0.00 0.00 4.45
4368 4525 3.822735 CACATGTTCATATTAGGCAGGGG 59.177 47.826 0.00 0.00 0.00 4.79
4377 4534 9.700831 GTTCATATTAGGCAGGGGAAATAATAT 57.299 33.333 0.00 0.00 32.08 1.28
4494 4651 4.158209 TGTCCATACATGTTTTGAGCATGG 59.842 41.667 13.26 13.26 45.68 3.66
4522 4679 0.035881 AGTGGCAGTGACATGGACTG 59.964 55.000 18.32 18.32 43.22 3.51
4535 4692 6.371548 GTGACATGGACTGAGTGCTTTATTAA 59.628 38.462 5.53 0.00 0.00 1.40
4548 4705 5.886474 GTGCTTTATTAACCTAGGCCTTCTT 59.114 40.000 12.58 2.11 0.00 2.52
4549 4706 5.885912 TGCTTTATTAACCTAGGCCTTCTTG 59.114 40.000 12.58 0.00 0.00 3.02
4550 4707 5.886474 GCTTTATTAACCTAGGCCTTCTTGT 59.114 40.000 12.58 0.00 0.00 3.16
4551 4708 7.052248 GCTTTATTAACCTAGGCCTTCTTGTA 58.948 38.462 12.58 0.00 0.00 2.41
4552 4709 7.226918 GCTTTATTAACCTAGGCCTTCTTGTAG 59.773 40.741 12.58 0.00 0.00 2.74
4553 4710 7.983166 TTATTAACCTAGGCCTTCTTGTAGA 57.017 36.000 12.58 0.00 0.00 2.59
4562 4719 3.873952 GGCCTTCTTGTAGATTGTAGCTG 59.126 47.826 0.00 0.00 0.00 4.24
4661 4819 3.703001 AGGTGGTCAGTAACATCAAGG 57.297 47.619 0.00 0.00 0.00 3.61
4672 4832 0.332972 ACATCAAGGCCCCCTCTTTC 59.667 55.000 0.00 0.00 30.89 2.62
4673 4833 0.332632 CATCAAGGCCCCCTCTTTCA 59.667 55.000 0.00 0.00 30.89 2.69
4686 4846 2.528564 CTCTTTCATTTCCCAGGGCAA 58.471 47.619 0.00 0.00 0.00 4.52
4703 4863 5.025453 AGGGCAATCAAGTAATTTCCATGT 58.975 37.500 0.00 0.00 0.00 3.21
4705 4865 6.096846 AGGGCAATCAAGTAATTTCCATGTAC 59.903 38.462 0.00 0.00 0.00 2.90
4720 4883 8.729805 TTTCCATGTACAAAATTTGCTTTTCT 57.270 26.923 5.52 0.00 34.80 2.52
4814 4977 4.321718 TGAGCAGAATCCAGAGACAAAAG 58.678 43.478 0.00 0.00 0.00 2.27
4825 4988 2.360165 AGAGACAAAAGCTTGCACAAGG 59.640 45.455 12.09 0.00 38.80 3.61
4835 4998 3.060615 GCACAAGGCAGCCTCTGG 61.061 66.667 16.53 10.34 43.97 3.86
4836 4999 2.752358 CACAAGGCAGCCTCTGGA 59.248 61.111 16.53 0.00 30.89 3.86
4837 5000 1.376942 CACAAGGCAGCCTCTGGAG 60.377 63.158 16.53 8.79 30.89 3.86
4888 5051 2.288702 CCAGGTCGGCAGAGAAGATATG 60.289 54.545 0.00 0.00 0.00 1.78
4893 5056 3.804873 GTCGGCAGAGAAGATATGGTTTC 59.195 47.826 0.00 0.00 0.00 2.78
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.886505 TCTCGTATGTTTTGTTTGGGCTT 59.113 39.130 0.00 0.00 0.00 4.35
1 2 3.482436 TCTCGTATGTTTTGTTTGGGCT 58.518 40.909 0.00 0.00 0.00 5.19
2 3 3.907894 TCTCGTATGTTTTGTTTGGGC 57.092 42.857 0.00 0.00 0.00 5.36
3 4 5.219633 CCTTTCTCGTATGTTTTGTTTGGG 58.780 41.667 0.00 0.00 0.00 4.12
4 5 4.679654 GCCTTTCTCGTATGTTTTGTTTGG 59.320 41.667 0.00 0.00 0.00 3.28
5 6 5.277825 TGCCTTTCTCGTATGTTTTGTTTG 58.722 37.500 0.00 0.00 0.00 2.93
6 7 5.508200 TGCCTTTCTCGTATGTTTTGTTT 57.492 34.783 0.00 0.00 0.00 2.83
7 8 5.705609 ATGCCTTTCTCGTATGTTTTGTT 57.294 34.783 0.00 0.00 0.00 2.83
8 9 5.705609 AATGCCTTTCTCGTATGTTTTGT 57.294 34.783 0.00 0.00 0.00 2.83
9 10 8.514136 TTTTAATGCCTTTCTCGTATGTTTTG 57.486 30.769 0.00 0.00 0.00 2.44
40 41 0.538057 ATGTGGTGAGCACTTGGTGG 60.538 55.000 16.26 0.00 33.64 4.61
41 42 0.877071 GATGTGGTGAGCACTTGGTG 59.123 55.000 16.26 0.00 36.51 4.17
42 43 0.473755 TGATGTGGTGAGCACTTGGT 59.526 50.000 16.26 0.00 0.00 3.67
43 44 1.538512 CTTGATGTGGTGAGCACTTGG 59.461 52.381 16.26 0.00 0.00 3.61
44 45 1.538512 CCTTGATGTGGTGAGCACTTG 59.461 52.381 16.26 0.00 0.00 3.16
45 46 1.546323 CCCTTGATGTGGTGAGCACTT 60.546 52.381 16.26 9.67 0.00 3.16
46 47 0.037303 CCCTTGATGTGGTGAGCACT 59.963 55.000 16.26 1.44 0.00 4.40
47 48 0.962356 CCCCTTGATGTGGTGAGCAC 60.962 60.000 8.00 8.00 0.00 4.40
48 49 1.379916 CCCCTTGATGTGGTGAGCA 59.620 57.895 0.00 0.00 0.00 4.26
49 50 2.048603 GCCCCTTGATGTGGTGAGC 61.049 63.158 0.00 0.00 0.00 4.26
50 51 1.746615 CGCCCCTTGATGTGGTGAG 60.747 63.158 0.00 0.00 0.00 3.51
51 52 2.350895 CGCCCCTTGATGTGGTGA 59.649 61.111 0.00 0.00 0.00 4.02
52 53 3.443045 GCGCCCCTTGATGTGGTG 61.443 66.667 0.00 0.00 0.00 4.17
53 54 4.740822 GGCGCCCCTTGATGTGGT 62.741 66.667 18.11 0.00 0.00 4.16
64 65 4.593864 CTAGCTTCTCCGGCGCCC 62.594 72.222 23.46 4.36 34.52 6.13
65 66 3.776659 GACTAGCTTCTCCGGCGCC 62.777 68.421 19.07 19.07 34.52 6.53
66 67 2.278923 GACTAGCTTCTCCGGCGC 60.279 66.667 0.00 0.00 34.52 6.53
67 68 0.802607 GTTGACTAGCTTCTCCGGCG 60.803 60.000 0.00 0.00 34.52 6.46
68 69 0.802607 CGTTGACTAGCTTCTCCGGC 60.803 60.000 0.00 0.00 0.00 6.13
69 70 0.179134 CCGTTGACTAGCTTCTCCGG 60.179 60.000 0.00 0.00 0.00 5.14
70 71 0.179134 CCCGTTGACTAGCTTCTCCG 60.179 60.000 0.00 0.00 0.00 4.63
71 72 0.460459 GCCCGTTGACTAGCTTCTCC 60.460 60.000 0.00 0.00 0.00 3.71
72 73 0.460459 GGCCCGTTGACTAGCTTCTC 60.460 60.000 0.00 0.00 0.00 2.87
73 74 1.597461 GGCCCGTTGACTAGCTTCT 59.403 57.895 0.00 0.00 0.00 2.85
74 75 1.810030 CGGCCCGTTGACTAGCTTC 60.810 63.158 0.00 0.00 0.00 3.86
75 76 2.227089 CTCGGCCCGTTGACTAGCTT 62.227 60.000 1.63 0.00 0.00 3.74
76 77 2.678934 TCGGCCCGTTGACTAGCT 60.679 61.111 1.63 0.00 0.00 3.32
77 78 2.202756 CTCGGCCCGTTGACTAGC 60.203 66.667 1.63 0.00 0.00 3.42
78 79 2.494918 CCTCGGCCCGTTGACTAG 59.505 66.667 1.63 0.00 0.00 2.57
79 80 3.766691 GCCTCGGCCCGTTGACTA 61.767 66.667 1.63 0.00 34.56 2.59
106 107 4.559063 CTGGGGCGGATGCTGGAG 62.559 72.222 0.00 0.00 42.25 3.86
125 126 1.971505 TAGAGAATGGGCCAGGTGCG 61.972 60.000 13.78 0.00 42.61 5.34
126 127 0.179034 CTAGAGAATGGGCCAGGTGC 60.179 60.000 13.78 1.37 40.16 5.01
127 128 0.179034 GCTAGAGAATGGGCCAGGTG 60.179 60.000 13.78 0.00 0.00 4.00
128 129 1.348775 GGCTAGAGAATGGGCCAGGT 61.349 60.000 13.78 1.32 43.59 4.00
129 130 1.453669 GGCTAGAGAATGGGCCAGG 59.546 63.158 13.78 0.00 43.59 4.45
132 133 0.321122 CGATGGCTAGAGAATGGGCC 60.321 60.000 0.00 0.00 44.31 5.80
133 134 0.321122 CCGATGGCTAGAGAATGGGC 60.321 60.000 0.00 0.00 35.26 5.36
134 135 0.322975 CCCGATGGCTAGAGAATGGG 59.677 60.000 0.00 0.00 0.00 4.00
135 136 1.051812 ACCCGATGGCTAGAGAATGG 58.948 55.000 0.00 0.00 33.59 3.16
136 137 1.875576 GCACCCGATGGCTAGAGAATG 60.876 57.143 0.00 0.00 33.59 2.67
137 138 0.394565 GCACCCGATGGCTAGAGAAT 59.605 55.000 0.00 0.00 33.59 2.40
138 139 1.823295 GCACCCGATGGCTAGAGAA 59.177 57.895 0.00 0.00 33.59 2.87
139 140 3.538614 GCACCCGATGGCTAGAGA 58.461 61.111 0.00 0.00 33.59 3.10
153 154 3.663176 TTCTTGCAGCGCTGGCAC 61.663 61.111 36.47 21.56 41.75 5.01
154 155 3.663176 GTTCTTGCAGCGCTGGCA 61.663 61.111 36.47 29.74 43.41 4.92
155 156 3.663176 TGTTCTTGCAGCGCTGGC 61.663 61.111 36.47 27.68 40.37 4.85
156 157 2.062361 TTGTGTTCTTGCAGCGCTGG 62.062 55.000 36.47 21.38 0.00 4.85
157 158 0.659417 CTTGTGTTCTTGCAGCGCTG 60.659 55.000 32.83 32.83 0.00 5.18
158 159 0.815213 TCTTGTGTTCTTGCAGCGCT 60.815 50.000 2.64 2.64 0.00 5.92
159 160 0.029300 TTCTTGTGTTCTTGCAGCGC 59.971 50.000 0.00 0.00 0.00 5.92
160 161 2.473530 TTTCTTGTGTTCTTGCAGCG 57.526 45.000 0.00 0.00 0.00 5.18
161 162 4.362279 TCAATTTCTTGTGTTCTTGCAGC 58.638 39.130 0.00 0.00 33.87 5.25
162 163 6.267817 TCTTCAATTTCTTGTGTTCTTGCAG 58.732 36.000 0.00 0.00 33.87 4.41
163 164 6.206395 TCTTCAATTTCTTGTGTTCTTGCA 57.794 33.333 0.00 0.00 33.87 4.08
164 165 7.524294 TTTCTTCAATTTCTTGTGTTCTTGC 57.476 32.000 0.00 0.00 33.87 4.01
168 169 9.950680 TGACTATTTCTTCAATTTCTTGTGTTC 57.049 29.630 0.00 0.00 33.87 3.18
169 170 9.956720 CTGACTATTTCTTCAATTTCTTGTGTT 57.043 29.630 0.00 0.00 33.87 3.32
170 171 9.342308 TCTGACTATTTCTTCAATTTCTTGTGT 57.658 29.630 0.00 0.00 33.87 3.72
171 172 9.823098 CTCTGACTATTTCTTCAATTTCTTGTG 57.177 33.333 0.00 0.00 33.87 3.33
172 173 9.784531 TCTCTGACTATTTCTTCAATTTCTTGT 57.215 29.630 0.00 0.00 33.87 3.16
174 175 9.225436 GGTCTCTGACTATTTCTTCAATTTCTT 57.775 33.333 0.00 0.00 32.47 2.52
175 176 7.826744 GGGTCTCTGACTATTTCTTCAATTTCT 59.173 37.037 0.00 0.00 32.47 2.52
176 177 7.201565 CGGGTCTCTGACTATTTCTTCAATTTC 60.202 40.741 0.00 0.00 32.47 2.17
177 178 6.595716 CGGGTCTCTGACTATTTCTTCAATTT 59.404 38.462 0.00 0.00 32.47 1.82
178 179 6.109359 CGGGTCTCTGACTATTTCTTCAATT 58.891 40.000 0.00 0.00 32.47 2.32
179 180 5.187967 ACGGGTCTCTGACTATTTCTTCAAT 59.812 40.000 0.00 0.00 32.47 2.57
180 181 4.527038 ACGGGTCTCTGACTATTTCTTCAA 59.473 41.667 0.00 0.00 32.47 2.69
181 182 4.082190 CACGGGTCTCTGACTATTTCTTCA 60.082 45.833 0.00 0.00 32.47 3.02
182 183 4.158025 TCACGGGTCTCTGACTATTTCTTC 59.842 45.833 0.00 0.00 32.47 2.87
183 184 4.087182 TCACGGGTCTCTGACTATTTCTT 58.913 43.478 0.00 0.00 32.47 2.52
184 185 3.698289 TCACGGGTCTCTGACTATTTCT 58.302 45.455 0.00 0.00 32.47 2.52
185 186 4.098044 TGATCACGGGTCTCTGACTATTTC 59.902 45.833 0.00 0.00 32.47 2.17
186 187 4.023980 TGATCACGGGTCTCTGACTATTT 58.976 43.478 0.00 0.00 32.47 1.40
187 188 3.381908 GTGATCACGGGTCTCTGACTATT 59.618 47.826 10.69 0.00 32.47 1.73
188 189 2.952978 GTGATCACGGGTCTCTGACTAT 59.047 50.000 10.69 0.00 32.47 2.12
189 190 2.366533 GTGATCACGGGTCTCTGACTA 58.633 52.381 10.69 0.00 32.47 2.59
190 191 1.178276 GTGATCACGGGTCTCTGACT 58.822 55.000 10.69 0.00 32.47 3.41
191 192 0.173708 GGTGATCACGGGTCTCTGAC 59.826 60.000 19.33 0.00 0.00 3.51
192 193 0.251608 TGGTGATCACGGGTCTCTGA 60.252 55.000 19.33 0.00 0.00 3.27
193 194 0.826715 ATGGTGATCACGGGTCTCTG 59.173 55.000 19.33 0.00 0.00 3.35
194 195 1.115467 GATGGTGATCACGGGTCTCT 58.885 55.000 19.33 0.00 0.00 3.10
195 196 1.115467 AGATGGTGATCACGGGTCTC 58.885 55.000 19.33 10.76 0.00 3.36
196 197 1.573108 AAGATGGTGATCACGGGTCT 58.427 50.000 19.33 17.45 0.00 3.85
197 198 2.483188 GGTAAGATGGTGATCACGGGTC 60.483 54.545 19.33 15.67 0.00 4.46
198 199 1.485066 GGTAAGATGGTGATCACGGGT 59.515 52.381 19.33 7.79 0.00 5.28
199 200 1.762957 AGGTAAGATGGTGATCACGGG 59.237 52.381 19.33 0.00 0.00 5.28
200 201 2.483714 CCAGGTAAGATGGTGATCACGG 60.484 54.545 19.33 7.18 32.85 4.94
201 202 2.430694 TCCAGGTAAGATGGTGATCACG 59.569 50.000 19.33 1.71 39.01 4.35
202 203 3.181461 CCTCCAGGTAAGATGGTGATCAC 60.181 52.174 17.91 17.91 39.01 3.06
203 204 3.041211 CCTCCAGGTAAGATGGTGATCA 58.959 50.000 0.00 0.00 39.01 2.92
204 205 2.224402 GCCTCCAGGTAAGATGGTGATC 60.224 54.545 0.00 0.00 39.01 2.92
205 206 1.771255 GCCTCCAGGTAAGATGGTGAT 59.229 52.381 0.00 0.00 39.01 3.06
206 207 1.204146 GCCTCCAGGTAAGATGGTGA 58.796 55.000 0.00 0.00 39.01 4.02
207 208 0.181350 GGCCTCCAGGTAAGATGGTG 59.819 60.000 0.00 0.00 39.01 4.17
208 209 1.338136 CGGCCTCCAGGTAAGATGGT 61.338 60.000 0.00 0.00 39.01 3.55
209 210 1.447643 CGGCCTCCAGGTAAGATGG 59.552 63.158 0.00 0.00 39.33 3.51
210 211 1.447643 CCGGCCTCCAGGTAAGATG 59.552 63.158 0.00 0.00 37.57 2.90
211 212 1.766461 CCCGGCCTCCAGGTAAGAT 60.766 63.158 0.00 0.00 37.57 2.40
212 213 2.365105 CCCGGCCTCCAGGTAAGA 60.365 66.667 0.00 0.00 37.57 2.10
213 214 4.176752 GCCCGGCCTCCAGGTAAG 62.177 72.222 0.00 0.00 37.57 2.34
225 226 3.439540 CACCAAATGTCGGCCCGG 61.440 66.667 1.90 0.00 0.00 5.73
226 227 4.114997 GCACCAAATGTCGGCCCG 62.115 66.667 0.00 0.00 0.00 6.13
227 228 2.350458 ATGCACCAAATGTCGGCCC 61.350 57.895 0.00 0.00 0.00 5.80
228 229 1.153784 CATGCACCAAATGTCGGCC 60.154 57.895 0.00 0.00 0.00 6.13
229 230 1.806758 GCATGCACCAAATGTCGGC 60.807 57.895 14.21 0.00 0.00 5.54
230 231 1.514657 CGCATGCACCAAATGTCGG 60.515 57.895 19.57 0.00 0.00 4.79
231 232 1.514657 CCGCATGCACCAAATGTCG 60.515 57.895 19.57 0.00 0.00 4.35
232 233 0.038343 AACCGCATGCACCAAATGTC 60.038 50.000 19.57 0.00 0.00 3.06
233 234 1.202114 CTAACCGCATGCACCAAATGT 59.798 47.619 19.57 0.00 0.00 2.71
234 235 1.472082 TCTAACCGCATGCACCAAATG 59.528 47.619 19.57 0.00 0.00 2.32
235 236 1.472480 GTCTAACCGCATGCACCAAAT 59.528 47.619 19.57 0.00 0.00 2.32
236 237 0.878416 GTCTAACCGCATGCACCAAA 59.122 50.000 19.57 0.00 0.00 3.28
237 238 1.295357 CGTCTAACCGCATGCACCAA 61.295 55.000 19.57 0.00 0.00 3.67
238 239 1.739929 CGTCTAACCGCATGCACCA 60.740 57.895 19.57 0.00 0.00 4.17
239 240 2.461110 CCGTCTAACCGCATGCACC 61.461 63.158 19.57 0.00 0.00 5.01
240 241 3.089784 CCGTCTAACCGCATGCAC 58.910 61.111 19.57 5.99 0.00 4.57
241 242 2.817834 GCCGTCTAACCGCATGCA 60.818 61.111 19.57 0.00 0.00 3.96
242 243 3.573491 GGCCGTCTAACCGCATGC 61.573 66.667 7.91 7.91 0.00 4.06
243 244 3.261951 CGGCCGTCTAACCGCATG 61.262 66.667 19.50 0.00 43.44 4.06
248 249 3.427598 GAGAGCCGGCCGTCTAACC 62.428 68.421 26.15 4.58 0.00 2.85
249 250 2.104530 GAGAGCCGGCCGTCTAAC 59.895 66.667 26.15 10.43 0.00 2.34
250 251 3.515286 CGAGAGCCGGCCGTCTAA 61.515 66.667 26.15 0.00 33.91 2.10
251 252 4.790962 ACGAGAGCCGGCCGTCTA 62.791 66.667 26.15 0.00 43.93 2.59
260 261 3.649277 ATGCACGGACACGAGAGCC 62.649 63.158 0.00 0.00 44.60 4.70
261 262 2.125912 ATGCACGGACACGAGAGC 60.126 61.111 0.00 0.00 44.60 4.09
262 263 1.080501 ACATGCACGGACACGAGAG 60.081 57.895 0.00 0.00 44.60 3.20
263 264 1.372872 CACATGCACGGACACGAGA 60.373 57.895 0.00 0.00 44.60 4.04
264 265 2.382746 CCACATGCACGGACACGAG 61.383 63.158 0.00 0.00 44.60 4.18
265 266 2.166130 ATCCACATGCACGGACACGA 62.166 55.000 3.57 0.00 44.60 4.35
267 268 1.796151 CATCCACATGCACGGACAC 59.204 57.895 3.57 0.00 33.05 3.67
268 269 4.299756 CATCCACATGCACGGACA 57.700 55.556 3.57 0.00 33.05 4.02
276 277 3.928769 CGCGGACGCATCCACATG 61.929 66.667 17.35 0.00 46.67 3.21
287 288 1.372128 ACACTAAACGTCCGCGGAC 60.372 57.895 41.75 41.75 43.45 4.79
288 289 1.372004 CACACTAAACGTCCGCGGA 60.372 57.895 27.28 27.28 43.45 5.54
289 290 1.611592 GACACACTAAACGTCCGCGG 61.612 60.000 22.12 22.12 43.45 6.46
290 291 1.611592 GGACACACTAAACGTCCGCG 61.612 60.000 0.00 0.00 39.86 6.46
291 292 2.147820 GGACACACTAAACGTCCGC 58.852 57.895 0.00 0.00 39.86 5.54
293 294 2.358939 ATCGGACACACTAAACGTCC 57.641 50.000 0.00 0.00 44.79 4.79
294 295 4.325472 CCTAAATCGGACACACTAAACGTC 59.675 45.833 0.00 0.00 0.00 4.34
295 296 4.022068 TCCTAAATCGGACACACTAAACGT 60.022 41.667 0.00 0.00 0.00 3.99
296 297 4.487948 TCCTAAATCGGACACACTAAACG 58.512 43.478 0.00 0.00 0.00 3.60
297 298 5.220605 GCATCCTAAATCGGACACACTAAAC 60.221 44.000 0.00 0.00 35.52 2.01
298 299 4.873827 GCATCCTAAATCGGACACACTAAA 59.126 41.667 0.00 0.00 35.52 1.85
299 300 4.439057 GCATCCTAAATCGGACACACTAA 58.561 43.478 0.00 0.00 35.52 2.24
300 301 3.490249 CGCATCCTAAATCGGACACACTA 60.490 47.826 0.00 0.00 35.52 2.74
301 302 2.738643 CGCATCCTAAATCGGACACACT 60.739 50.000 0.00 0.00 35.52 3.55
302 303 1.593006 CGCATCCTAAATCGGACACAC 59.407 52.381 0.00 0.00 35.52 3.82
303 304 1.206132 ACGCATCCTAAATCGGACACA 59.794 47.619 0.00 0.00 35.52 3.72
304 305 1.859080 GACGCATCCTAAATCGGACAC 59.141 52.381 0.00 0.00 35.52 3.67
305 306 1.535226 CGACGCATCCTAAATCGGACA 60.535 52.381 0.00 0.00 35.52 4.02
306 307 1.129326 CGACGCATCCTAAATCGGAC 58.871 55.000 0.00 0.00 35.52 4.79
307 308 3.562639 CGACGCATCCTAAATCGGA 57.437 52.632 0.00 0.00 37.50 4.55
308 309 2.517598 CCGACGCATCCTAAATCGG 58.482 57.895 0.00 0.00 45.61 4.18
309 310 1.001706 TCTCCGACGCATCCTAAATCG 60.002 52.381 0.00 0.00 0.00 3.34
310 311 2.795175 TCTCCGACGCATCCTAAATC 57.205 50.000 0.00 0.00 0.00 2.17
311 312 2.365617 ACATCTCCGACGCATCCTAAAT 59.634 45.455 0.00 0.00 0.00 1.40
312 313 1.754803 ACATCTCCGACGCATCCTAAA 59.245 47.619 0.00 0.00 0.00 1.85
313 314 1.337071 GACATCTCCGACGCATCCTAA 59.663 52.381 0.00 0.00 0.00 2.69
314 315 0.952280 GACATCTCCGACGCATCCTA 59.048 55.000 0.00 0.00 0.00 2.94
315 316 1.736586 GACATCTCCGACGCATCCT 59.263 57.895 0.00 0.00 0.00 3.24
316 317 1.300233 GGACATCTCCGACGCATCC 60.300 63.158 0.00 0.00 0.00 3.51
317 318 0.318275 GAGGACATCTCCGACGCATC 60.318 60.000 0.00 0.00 42.22 3.91
318 319 1.037579 TGAGGACATCTCCGACGCAT 61.038 55.000 0.00 0.00 42.22 4.73
319 320 1.677633 TGAGGACATCTCCGACGCA 60.678 57.895 0.00 0.00 42.22 5.24
320 321 1.226717 GTGAGGACATCTCCGACGC 60.227 63.158 0.00 0.00 42.22 5.19
321 322 1.433879 GGTGAGGACATCTCCGACG 59.566 63.158 0.00 0.00 42.22 5.12
325 326 1.433879 CGTCGGTGAGGACATCTCC 59.566 63.158 0.00 0.00 41.76 3.71
326 327 1.433879 CCGTCGGTGAGGACATCTC 59.566 63.158 2.08 0.00 42.74 2.75
327 328 2.711922 GCCGTCGGTGAGGACATCT 61.712 63.158 13.94 0.00 36.73 2.90
328 329 2.202756 GCCGTCGGTGAGGACATC 60.203 66.667 13.94 0.00 36.73 3.06
329 330 2.283529 AAGCCGTCGGTGAGGACAT 61.284 57.895 13.94 0.00 36.73 3.06
330 331 2.915659 AAGCCGTCGGTGAGGACA 60.916 61.111 13.94 0.00 36.73 4.02
331 332 2.432628 CAAGCCGTCGGTGAGGAC 60.433 66.667 13.94 0.00 0.00 3.85
332 333 3.691342 CCAAGCCGTCGGTGAGGA 61.691 66.667 13.94 0.00 0.00 3.71
333 334 4.760047 CCCAAGCCGTCGGTGAGG 62.760 72.222 13.94 11.62 0.00 3.86
334 335 2.162338 TTACCCAAGCCGTCGGTGAG 62.162 60.000 13.94 2.60 0.00 3.51
335 336 1.756408 TTTACCCAAGCCGTCGGTGA 61.756 55.000 13.94 0.00 0.00 4.02
336 337 0.885596 TTTTACCCAAGCCGTCGGTG 60.886 55.000 13.94 3.86 0.00 4.94
337 338 0.037160 ATTTTACCCAAGCCGTCGGT 59.963 50.000 13.94 0.00 0.00 4.69
338 339 1.131693 GAATTTTACCCAAGCCGTCGG 59.868 52.381 6.99 6.99 0.00 4.79
339 340 1.201987 CGAATTTTACCCAAGCCGTCG 60.202 52.381 0.00 0.00 0.00 5.12
340 341 1.808343 ACGAATTTTACCCAAGCCGTC 59.192 47.619 0.00 0.00 0.00 4.79
341 342 1.900245 ACGAATTTTACCCAAGCCGT 58.100 45.000 0.00 0.00 0.00 5.68
342 343 3.239254 GAAACGAATTTTACCCAAGCCG 58.761 45.455 0.00 0.00 0.00 5.52
343 344 3.239254 CGAAACGAATTTTACCCAAGCC 58.761 45.455 0.00 0.00 0.00 4.35
344 345 3.666797 CACGAAACGAATTTTACCCAAGC 59.333 43.478 0.00 0.00 0.00 4.01
345 346 5.098218 TCACGAAACGAATTTTACCCAAG 57.902 39.130 0.00 0.00 0.00 3.61
346 347 4.575645 ACTCACGAAACGAATTTTACCCAA 59.424 37.500 0.00 0.00 0.00 4.12
356 357 5.706916 AGCTCTTTATACTCACGAAACGAA 58.293 37.500 0.00 0.00 0.00 3.85
358 359 4.202558 CGAGCTCTTTATACTCACGAAACG 59.797 45.833 12.85 0.00 0.00 3.60
360 361 5.093457 CACGAGCTCTTTATACTCACGAAA 58.907 41.667 12.85 0.00 0.00 3.46
363 364 3.364062 CCACGAGCTCTTTATACTCACG 58.636 50.000 12.85 0.00 0.00 4.35
364 365 3.491104 CCCCACGAGCTCTTTATACTCAC 60.491 52.174 12.85 0.00 0.00 3.51
365 366 2.693591 CCCCACGAGCTCTTTATACTCA 59.306 50.000 12.85 0.00 0.00 3.41
378 379 3.188159 TCGAATAATTTCCCCCACGAG 57.812 47.619 0.00 0.00 0.00 4.18
379 380 3.630892 TTCGAATAATTTCCCCCACGA 57.369 42.857 0.00 0.00 0.00 4.35
381 382 5.736207 GCTCATTTCGAATAATTTCCCCCAC 60.736 44.000 0.00 0.00 0.00 4.61
382 383 4.340950 GCTCATTTCGAATAATTTCCCCCA 59.659 41.667 0.00 0.00 0.00 4.96
406 408 4.036971 ACAAATATCTCGTCTCCTCGGAAG 59.963 45.833 0.00 0.00 0.00 3.46
410 412 4.456019 CGTACAAATATCTCGTCTCCTCG 58.544 47.826 0.00 0.00 0.00 4.63
419 425 4.051922 CCTGAGGTGCGTACAAATATCTC 58.948 47.826 5.86 2.31 0.00 2.75
420 426 3.704566 TCCTGAGGTGCGTACAAATATCT 59.295 43.478 5.86 0.00 0.00 1.98
423 429 3.592059 GTTCCTGAGGTGCGTACAAATA 58.408 45.455 5.86 0.00 0.00 1.40
434 440 0.763223 ACAAGACCCGTTCCTGAGGT 60.763 55.000 0.00 0.00 36.31 3.85
447 453 2.861935 TCGAAGGTGAAACGAACAAGAC 59.138 45.455 0.00 0.00 38.12 3.01
455 461 1.419922 CGGCATCGAAGGTGAAACG 59.580 57.895 0.00 0.00 36.51 3.60
576 585 2.262774 CTCCCTTGGCCGCTTCTGAT 62.263 60.000 0.00 0.00 0.00 2.90
578 587 2.437359 CTCCCTTGGCCGCTTCTG 60.437 66.667 0.00 0.00 0.00 3.02
645 689 3.559655 CGTGAGGATTTTATCAATGGCGA 59.440 43.478 0.00 0.00 0.00 5.54
674 723 0.107312 AGGTGATCATGTGAGGCTGC 60.107 55.000 0.00 0.00 0.00 5.25
761 810 1.472662 AAGAGGACACTGGTGGACCG 61.473 60.000 5.70 0.00 39.43 4.79
762 811 0.765510 AAAGAGGACACTGGTGGACC 59.234 55.000 5.70 8.07 34.19 4.46
763 812 1.694696 AGAAAGAGGACACTGGTGGAC 59.305 52.381 5.70 0.00 34.19 4.02
764 813 1.971357 GAGAAAGAGGACACTGGTGGA 59.029 52.381 5.70 0.00 34.19 4.02
765 814 1.002544 GGAGAAAGAGGACACTGGTGG 59.997 57.143 5.70 0.00 34.19 4.61
766 815 1.974236 AGGAGAAAGAGGACACTGGTG 59.026 52.381 0.00 0.00 0.00 4.17
767 816 2.158234 AGAGGAGAAAGAGGACACTGGT 60.158 50.000 0.00 0.00 0.00 4.00
768 817 2.233431 CAGAGGAGAAAGAGGACACTGG 59.767 54.545 0.00 0.00 0.00 4.00
769 818 2.353605 GCAGAGGAGAAAGAGGACACTG 60.354 54.545 0.00 0.00 0.00 3.66
770 819 1.899142 GCAGAGGAGAAAGAGGACACT 59.101 52.381 0.00 0.00 0.00 3.55
771 820 1.066502 GGCAGAGGAGAAAGAGGACAC 60.067 57.143 0.00 0.00 0.00 3.67
772 821 1.270907 GGCAGAGGAGAAAGAGGACA 58.729 55.000 0.00 0.00 0.00 4.02
773 822 0.539518 GGGCAGAGGAGAAAGAGGAC 59.460 60.000 0.00 0.00 0.00 3.85
774 823 0.618968 GGGGCAGAGGAGAAAGAGGA 60.619 60.000 0.00 0.00 0.00 3.71
800 849 4.530857 CATCCTCGCCGGGGTGAC 62.531 72.222 20.87 0.00 39.72 3.67
801 850 4.770362 TCATCCTCGCCGGGGTGA 62.770 66.667 20.87 17.08 43.45 4.02
802 851 4.227134 CTCATCCTCGCCGGGGTG 62.227 72.222 19.13 16.01 38.75 4.61
803 852 4.779733 ACTCATCCTCGCCGGGGT 62.780 66.667 19.13 0.00 0.00 4.95
816 865 5.344743 AAGCTATAAACTAGCAGCACTCA 57.655 39.130 6.98 0.00 42.68 3.41
825 874 6.697892 CGGAGGAGTCAAAAGCTATAAACTAG 59.302 42.308 0.00 0.00 0.00 2.57
930 999 3.533907 TCCCTCTCTCTGGAAATCCTAGT 59.466 47.826 0.44 0.00 36.82 2.57
960 1060 3.343617 CCTGACCTCTCGATCTCTATCC 58.656 54.545 0.00 0.00 0.00 2.59
994 1094 4.240103 CGGCATCTCCATCCGCCA 62.240 66.667 0.00 0.00 45.14 5.69
995 1095 4.996434 CCGGCATCTCCATCCGCC 62.996 72.222 0.00 0.00 41.68 6.13
998 1098 4.996434 CCGCCGGCATCTCCATCC 62.996 72.222 28.98 0.00 34.01 3.51
1022 1122 1.731433 GCACATGAGCGGCAATGGAT 61.731 55.000 16.77 0.00 0.00 3.41
1036 1136 0.037877 AGCAGCAAGAAGAGGCACAT 59.962 50.000 0.00 0.00 0.00 3.21
1039 1139 1.970114 GCAGCAGCAAGAAGAGGCA 60.970 57.895 0.00 0.00 41.58 4.75
1135 1244 3.219198 GGATGCGGTCCCATTGGC 61.219 66.667 0.00 0.00 41.50 4.52
1222 1331 1.006281 AGAAATGCAGGCCCTGAATCA 59.994 47.619 16.85 3.05 26.32 2.57
1261 1370 1.521457 ACACACACACACGCAGAGG 60.521 57.895 0.00 0.00 0.00 3.69
1265 1374 1.669437 ACACACACACACACACGCA 60.669 52.632 0.00 0.00 0.00 5.24
1266 1375 1.225991 CACACACACACACACACGC 60.226 57.895 0.00 0.00 0.00 5.34
1267 1376 0.179227 CACACACACACACACACACG 60.179 55.000 0.00 0.00 0.00 4.49
1268 1377 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
1269 1378 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
1270 1379 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
1271 1380 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
1272 1381 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
1273 1382 1.533299 GAACACACACACACACACACA 59.467 47.619 0.00 0.00 0.00 3.72
1274 1383 1.804151 AGAACACACACACACACACAC 59.196 47.619 0.00 0.00 0.00 3.82
1275 1384 2.177394 AGAACACACACACACACACA 57.823 45.000 0.00 0.00 0.00 3.72
1276 1385 2.850321 CAAGAACACACACACACACAC 58.150 47.619 0.00 0.00 0.00 3.82
1279 1388 1.819928 AGCAAGAACACACACACACA 58.180 45.000 0.00 0.00 0.00 3.72
1359 1468 2.426522 CAGAACAGCTCCGATCCAAAA 58.573 47.619 0.00 0.00 0.00 2.44
1367 1476 2.402305 GAGATATGCAGAACAGCTCCG 58.598 52.381 0.00 0.00 34.99 4.63
1371 1480 2.515926 TCCGAGATATGCAGAACAGC 57.484 50.000 0.00 0.00 0.00 4.40
1398 1507 5.170270 CGTTGCTATTTGCGAGAATGAAATC 59.830 40.000 0.00 0.00 46.63 2.17
1437 1546 8.117956 TCCCCATCTACTAGTAGAAAACTAACA 58.882 37.037 31.11 10.11 44.44 2.41
1476 1585 3.623510 GCAGAAGTCGAATAAAAGGAGGG 59.376 47.826 0.00 0.00 0.00 4.30
1480 1589 2.223044 GCCGCAGAAGTCGAATAAAAGG 60.223 50.000 0.00 0.00 0.00 3.11
1542 1651 2.673523 CAGGTTCTGCTCCCCTGG 59.326 66.667 0.00 0.00 41.69 4.45
1641 1751 5.481473 TGAAGAGAGATTTGAATTTTGGGGG 59.519 40.000 0.00 0.00 0.00 5.40
1674 1784 0.854218 TTTGGAACCACTGGCCCTTA 59.146 50.000 0.00 0.00 0.00 2.69
1682 1792 6.484364 ACATCAAAAATCTTTGGAACCACT 57.516 33.333 0.00 0.00 41.98 4.00
1683 1793 7.170828 GGTTACATCAAAAATCTTTGGAACCAC 59.829 37.037 9.86 0.00 41.98 4.16
1684 1794 7.213678 GGTTACATCAAAAATCTTTGGAACCA 58.786 34.615 9.86 0.00 41.98 3.67
1685 1795 6.649141 GGGTTACATCAAAAATCTTTGGAACC 59.351 38.462 6.78 6.78 41.98 3.62
1712 1822 6.204688 TGATGAACAGTCGAGCTTTTTATTGT 59.795 34.615 0.00 0.00 0.00 2.71
1726 1836 4.992688 ACTCGAGAAGATGATGAACAGTC 58.007 43.478 21.68 0.00 0.00 3.51
1786 1896 1.657751 GAGGAGTTGGAATTGGGCGC 61.658 60.000 0.00 0.00 0.00 6.53
1787 1897 0.035056 AGAGGAGTTGGAATTGGGCG 60.035 55.000 0.00 0.00 0.00 6.13
1788 1898 3.217626 CATAGAGGAGTTGGAATTGGGC 58.782 50.000 0.00 0.00 0.00 5.36
1790 1900 4.848357 ACACATAGAGGAGTTGGAATTGG 58.152 43.478 0.00 0.00 0.00 3.16
1807 1919 1.159285 CCGTGATCACTGCAACACAT 58.841 50.000 22.95 0.00 33.56 3.21
1947 2059 2.677228 CCTTGCCGTTGGGGATCT 59.323 61.111 0.00 0.00 38.47 2.75
1991 2103 0.329261 CCAATTGAGGGTGAGGCAGA 59.671 55.000 7.12 0.00 0.00 4.26
1992 2104 0.038744 ACCAATTGAGGGTGAGGCAG 59.961 55.000 7.12 0.00 37.23 4.85
1993 2105 0.482446 AACCAATTGAGGGTGAGGCA 59.518 50.000 7.12 0.00 39.01 4.75
1994 2106 1.632589 AAACCAATTGAGGGTGAGGC 58.367 50.000 7.12 0.00 39.01 4.70
1995 2107 3.640967 TGAAAAACCAATTGAGGGTGAGG 59.359 43.478 7.12 0.00 39.01 3.86
1996 2108 4.797275 GCTGAAAAACCAATTGAGGGTGAG 60.797 45.833 7.12 0.00 39.01 3.51
1997 2109 3.069443 GCTGAAAAACCAATTGAGGGTGA 59.931 43.478 7.12 0.00 39.01 4.02
1998 2110 3.070015 AGCTGAAAAACCAATTGAGGGTG 59.930 43.478 7.12 0.00 39.01 4.61
1999 2111 3.308401 AGCTGAAAAACCAATTGAGGGT 58.692 40.909 7.12 0.00 41.41 4.34
2039 2151 2.703007 GGTAGATGGTCTGGCTCAATCT 59.297 50.000 0.00 0.00 0.00 2.40
2044 2159 2.362717 GTGTAGGTAGATGGTCTGGCTC 59.637 54.545 0.00 0.00 0.00 4.70
2057 2172 4.345547 TGGTGTCTGAACAATGTGTAGGTA 59.654 41.667 0.00 0.00 37.08 3.08
2061 2176 4.143986 TGTGGTGTCTGAACAATGTGTA 57.856 40.909 0.00 0.00 37.08 2.90
2082 2205 0.609131 CCAGCGTGATCCCCTTTGTT 60.609 55.000 0.00 0.00 0.00 2.83
2085 2208 1.002134 CACCAGCGTGATCCCCTTT 60.002 57.895 0.00 0.00 43.14 3.11
2106 2229 2.096069 CGTGTTGAACTTGCTCAGGATG 60.096 50.000 0.00 0.00 37.54 3.51
2386 2511 5.693104 CACAAGCATTTTAGTTTCACAGCAT 59.307 36.000 0.00 0.00 0.00 3.79
2396 2521 2.958355 ACCACAGCACAAGCATTTTAGT 59.042 40.909 0.00 0.00 45.49 2.24
2397 2522 3.648339 ACCACAGCACAAGCATTTTAG 57.352 42.857 0.00 0.00 45.49 1.85
2741 2867 7.223971 GGTGCGAAGTAAAGTGATGTGATTATA 59.776 37.037 0.00 0.00 0.00 0.98
2748 2874 2.066262 CGGTGCGAAGTAAAGTGATGT 58.934 47.619 0.00 0.00 0.00 3.06
2750 2876 2.607187 CTCGGTGCGAAGTAAAGTGAT 58.393 47.619 0.00 0.00 34.74 3.06
2751 2877 1.933500 GCTCGGTGCGAAGTAAAGTGA 60.934 52.381 0.00 0.00 34.74 3.41
2788 2914 2.679336 CAGTCATCGGCACATGAATTGA 59.321 45.455 0.00 0.00 34.50 2.57
2987 3125 2.948979 CAAGGTTACCTGCAGTGAACAA 59.051 45.455 22.45 4.93 32.13 2.83
2992 3130 1.608590 CCAACAAGGTTACCTGCAGTG 59.391 52.381 13.81 1.46 32.13 3.66
3090 3229 1.488393 CCAGAGATCTTCAGGTTCCCC 59.512 57.143 0.00 0.00 0.00 4.81
3132 3271 4.227538 CCGCACCATCTAATAAGTACTCG 58.772 47.826 0.00 0.00 0.00 4.18
3153 3292 6.558771 AAATTTTAGCACAAAAGGAATGCC 57.441 33.333 3.16 0.00 40.33 4.40
3186 3325 7.485418 TCAGAGCTTAAATTTCGTAACACAA 57.515 32.000 0.00 0.00 0.00 3.33
3188 3327 6.795593 GGTTCAGAGCTTAAATTTCGTAACAC 59.204 38.462 0.00 0.00 0.00 3.32
3190 3329 6.013689 CGGTTCAGAGCTTAAATTTCGTAAC 58.986 40.000 0.00 0.00 0.00 2.50
3191 3330 5.390145 GCGGTTCAGAGCTTAAATTTCGTAA 60.390 40.000 0.00 0.00 0.00 3.18
3193 3332 3.120304 GCGGTTCAGAGCTTAAATTTCGT 60.120 43.478 0.00 0.00 0.00 3.85
3194 3333 3.120338 TGCGGTTCAGAGCTTAAATTTCG 60.120 43.478 0.00 0.00 0.00 3.46
3195 3334 4.419522 TGCGGTTCAGAGCTTAAATTTC 57.580 40.909 0.00 0.00 0.00 2.17
3199 3338 4.846779 ATTTTGCGGTTCAGAGCTTAAA 57.153 36.364 0.00 0.00 0.00 1.52
3200 3339 4.518970 AGAATTTTGCGGTTCAGAGCTTAA 59.481 37.500 0.00 0.00 0.00 1.85
3201 3340 4.072131 AGAATTTTGCGGTTCAGAGCTTA 58.928 39.130 0.00 0.00 0.00 3.09
3203 3342 2.485814 GAGAATTTTGCGGTTCAGAGCT 59.514 45.455 0.00 0.00 0.00 4.09
3204 3343 2.414691 GGAGAATTTTGCGGTTCAGAGC 60.415 50.000 0.00 0.00 0.00 4.09
3207 3348 3.923017 AAGGAGAATTTTGCGGTTCAG 57.077 42.857 0.00 0.00 0.00 3.02
3213 3354 3.641437 TGGTGAAAGGAGAATTTTGCG 57.359 42.857 0.00 0.00 0.00 4.85
3231 3372 2.478894 CGGCCGCTAAATAGTTACATGG 59.521 50.000 14.67 0.00 0.00 3.66
3244 3385 0.320858 TGAAATTGACACGGCCGCTA 60.321 50.000 28.58 6.43 0.00 4.26
3249 3390 1.200020 CTTCCCTGAAATTGACACGGC 59.800 52.381 0.00 0.00 0.00 5.68
3252 3393 4.860072 GTCAACTTCCCTGAAATTGACAC 58.140 43.478 20.09 1.69 45.43 3.67
3275 3416 0.314418 CGTAGACGTCGCTCTTCTCG 60.314 60.000 10.46 3.99 34.11 4.04
3302 3443 6.397272 CATCAAGAGCTCTAGAAGAACAACT 58.603 40.000 18.59 0.00 0.00 3.16
3305 3446 4.161189 CCCATCAAGAGCTCTAGAAGAACA 59.839 45.833 18.59 0.00 0.00 3.18
3308 3449 3.052566 TCCCCATCAAGAGCTCTAGAAGA 60.053 47.826 18.59 13.07 0.00 2.87
3321 3462 0.846427 ACAGGCTTCCTCCCCATCAA 60.846 55.000 0.00 0.00 0.00 2.57
3329 3470 3.269178 CATCTTCTCAACAGGCTTCCTC 58.731 50.000 0.00 0.00 0.00 3.71
3400 3541 0.324943 TGCCCTGGTAAGTTGAGAGC 59.675 55.000 0.00 0.00 0.00 4.09
3405 3551 1.066143 ACTCGATGCCCTGGTAAGTTG 60.066 52.381 0.00 0.00 0.00 3.16
3406 3552 1.276622 ACTCGATGCCCTGGTAAGTT 58.723 50.000 0.00 0.00 0.00 2.66
3407 3553 2.154567 TACTCGATGCCCTGGTAAGT 57.845 50.000 0.00 0.00 0.00 2.24
3408 3554 3.322254 AGATTACTCGATGCCCTGGTAAG 59.678 47.826 0.00 0.00 0.00 2.34
3409 3555 3.305720 AGATTACTCGATGCCCTGGTAA 58.694 45.455 0.00 0.00 0.00 2.85
3415 3561 3.321111 TCCAACTAGATTACTCGATGCCC 59.679 47.826 0.00 0.00 0.00 5.36
3432 3578 9.862585 GTTGTTAATCAAATTGTGAAATCCAAC 57.137 29.630 0.00 0.00 40.50 3.77
3461 3607 4.158025 TGAAAGAGAGCTAGTTACTTCCGG 59.842 45.833 0.00 0.00 0.00 5.14
3462 3608 5.106078 ACTGAAAGAGAGCTAGTTACTTCCG 60.106 44.000 0.00 0.00 37.43 4.30
3475 3621 9.604626 GACAAAAATATGAACACTGAAAGAGAG 57.395 33.333 0.00 0.00 37.43 3.20
3497 3643 3.306973 CGAAGAATGCTCTATTGCGACAA 59.693 43.478 0.00 0.00 35.36 3.18
3501 3647 4.722203 ATTCGAAGAATGCTCTATTGCG 57.278 40.909 3.35 0.00 45.90 4.85
3506 3652 9.464714 GTACAGATAAATTCGAAGAATGCTCTA 57.535 33.333 3.35 0.00 45.90 2.43
3508 3654 8.131455 TGTACAGATAAATTCGAAGAATGCTC 57.869 34.615 3.35 0.00 45.90 4.26
3725 3871 3.866066 GCACAGGCATAGAGAACAACAGA 60.866 47.826 0.00 0.00 40.72 3.41
3812 3958 1.608283 GGAACAAGGGAGTGGAGAACG 60.608 57.143 0.00 0.00 0.00 3.95
3948 4095 2.129823 ACGCTGGACCGTATAATTCG 57.870 50.000 0.00 0.00 40.08 3.34
4027 4174 1.376553 GCAGGTTGGAGCTCTCACC 60.377 63.158 21.13 21.13 0.00 4.02
4049 4196 1.301165 GCCCAACCAGCAAAAGCAG 60.301 57.895 0.00 0.00 0.00 4.24
4050 4197 2.030490 CTGCCCAACCAGCAAAAGCA 62.030 55.000 0.00 0.00 40.35 3.91
4051 4198 1.301165 CTGCCCAACCAGCAAAAGC 60.301 57.895 0.00 0.00 40.35 3.51
4052 4199 0.316204 CTCTGCCCAACCAGCAAAAG 59.684 55.000 0.00 0.00 40.35 2.27
4134 4281 5.248870 TCCACAGAGCAGAAAAGAAAAAC 57.751 39.130 0.00 0.00 0.00 2.43
4180 4327 5.290885 GGGACAACAGTGTGTGAAAAATTTC 59.709 40.000 0.00 0.00 38.41 2.17
4203 4350 1.808945 AGCTCTCTCAAACGCAATTGG 59.191 47.619 7.72 0.00 0.00 3.16
4205 4352 2.225019 CACAGCTCTCTCAAACGCAATT 59.775 45.455 0.00 0.00 0.00 2.32
4270 4427 7.042051 TGTCGGAAAATCGATAATCAGATTTCC 60.042 37.037 19.05 19.05 43.72 3.13
4338 4495 1.462616 TATGAACATGTGCACCTGCC 58.537 50.000 20.42 13.45 41.18 4.85
4391 4548 9.754382 AATTTAAGATAATGCAACCATGTGATC 57.246 29.630 0.00 0.00 0.00 2.92
4418 4575 3.708403 TCCATCTGCTCATGTTCAGTT 57.292 42.857 13.69 6.02 0.00 3.16
4430 4587 0.750546 TGGCTGCTTGATCCATCTGC 60.751 55.000 0.00 0.00 0.00 4.26
4522 4679 5.037383 AGGCCTAGGTTAATAAAGCACTC 57.963 43.478 1.29 0.00 35.49 3.51
4535 4692 4.104831 ACAATCTACAAGAAGGCCTAGGT 58.895 43.478 5.16 4.58 0.00 3.08
4548 4705 2.677902 GCCAGCACAGCTACAATCTACA 60.678 50.000 0.00 0.00 36.40 2.74
4549 4706 1.936547 GCCAGCACAGCTACAATCTAC 59.063 52.381 0.00 0.00 36.40 2.59
4550 4707 1.554617 TGCCAGCACAGCTACAATCTA 59.445 47.619 0.00 0.00 36.40 1.98
4551 4708 0.325933 TGCCAGCACAGCTACAATCT 59.674 50.000 0.00 0.00 36.40 2.40
4552 4709 1.131883 CTTGCCAGCACAGCTACAATC 59.868 52.381 0.00 0.00 36.40 2.67
4553 4710 1.171308 CTTGCCAGCACAGCTACAAT 58.829 50.000 0.00 0.00 36.40 2.71
4562 4719 0.533755 AGACTGTCACTTGCCAGCAC 60.534 55.000 10.88 0.00 31.76 4.40
4661 4819 0.041090 TGGGAAATGAAAGAGGGGGC 59.959 55.000 0.00 0.00 0.00 5.80
4672 4832 2.181975 ACTTGATTGCCCTGGGAAATG 58.818 47.619 24.17 11.84 0.00 2.32
4673 4833 2.629017 ACTTGATTGCCCTGGGAAAT 57.371 45.000 19.40 19.40 0.00 2.17
4703 4863 6.991531 AGATGGCAAGAAAAGCAAATTTTGTA 59.008 30.769 10.65 0.00 41.24 2.41
4705 4865 6.308371 AGATGGCAAGAAAAGCAAATTTTG 57.692 33.333 4.72 4.72 41.24 2.44
4718 4881 1.210478 GGCAGGTTCTAGATGGCAAGA 59.790 52.381 12.21 0.00 39.18 3.02
4720 4883 1.289160 AGGCAGGTTCTAGATGGCAA 58.711 50.000 17.65 0.00 41.62 4.52
4795 4958 3.080319 AGCTTTTGTCTCTGGATTCTGC 58.920 45.455 0.00 0.00 0.00 4.26
4802 4965 1.677576 TGTGCAAGCTTTTGTCTCTGG 59.322 47.619 0.00 0.00 0.00 3.86
4828 4991 1.145819 GCATCCAGACTCCAGAGGC 59.854 63.158 0.00 0.00 36.46 4.70
4831 4994 2.037901 GAGATGCATCCAGACTCCAGA 58.962 52.381 23.06 0.00 0.00 3.86
4832 4995 1.761198 TGAGATGCATCCAGACTCCAG 59.239 52.381 23.06 0.00 31.66 3.86
4833 4996 1.483827 GTGAGATGCATCCAGACTCCA 59.516 52.381 23.06 7.23 31.66 3.86
4834 4997 1.761784 AGTGAGATGCATCCAGACTCC 59.238 52.381 23.06 8.43 31.66 3.85
4835 4998 2.429971 TCAGTGAGATGCATCCAGACTC 59.570 50.000 23.06 13.78 0.00 3.36
4836 4999 2.464782 TCAGTGAGATGCATCCAGACT 58.535 47.619 23.06 17.95 0.00 3.24
4837 5000 2.975732 TCAGTGAGATGCATCCAGAC 57.024 50.000 23.06 16.08 0.00 3.51
4893 5056 2.001803 TCTCCCCATCAAGCAAGGG 58.998 57.895 0.00 0.00 42.44 3.95


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.