Multiple sequence alignment - TraesCS7B01G421300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G421300 chr7B 100.000 2334 0 0 1 2334 690257457 690259790 0.000000e+00 4311.0
1 TraesCS7B01G421300 chr7B 83.025 1296 190 24 1 1281 690251736 690253016 0.000000e+00 1147.0
2 TraesCS7B01G421300 chr7B 84.470 792 114 7 378 1162 690302133 690302922 0.000000e+00 773.0
3 TraesCS7B01G421300 chr7B 83.598 756 106 14 1 747 690418385 690419131 0.000000e+00 693.0
4 TraesCS7B01G421300 chr7B 88.471 425 48 1 837 1260 690419129 690419553 1.600000e-141 512.0
5 TraesCS7B01G421300 chr7B 86.047 86 9 2 1372 1457 690419644 690419726 3.190000e-14 89.8
6 TraesCS7B01G421300 chr7D 85.724 1527 177 18 1 1498 606341410 606342924 0.000000e+00 1574.0
7 TraesCS7B01G421300 chr7D 83.644 1718 224 31 1 1685 606320052 606321745 0.000000e+00 1563.0
8 TraesCS7B01G421300 chr7D 81.174 1721 230 55 1 1682 606536850 606538515 0.000000e+00 1297.0
9 TraesCS7B01G421300 chr7D 95.798 119 5 0 1567 1685 606342951 606343069 2.370000e-45 193.0
10 TraesCS7B01G421300 chr7A 81.127 1722 231 52 1 1682 698590746 698592413 0.000000e+00 1293.0
11 TraesCS7B01G421300 chrUn 80.222 1709 263 46 1 1682 83317284 83318944 0.000000e+00 1214.0
12 TraesCS7B01G421300 chrUn 83.491 636 94 6 1 632 83338684 83339312 1.200000e-162 582.0
13 TraesCS7B01G421300 chrUn 80.052 767 91 33 937 1683 83339302 83340026 1.600000e-141 512.0
14 TraesCS7B01G421300 chrUn 87.991 433 46 4 1686 2115 304894322 304893893 7.440000e-140 507.0
15 TraesCS7B01G421300 chr3B 88.863 431 46 2 1686 2115 132398069 132397640 1.590000e-146 529.0
16 TraesCS7B01G421300 chr3B 88.532 436 44 4 1682 2114 55688680 55688248 7.390000e-145 523.0
17 TraesCS7B01G421300 chr3B 88.558 437 43 5 1682 2114 55697312 55696879 7.390000e-145 523.0
18 TraesCS7B01G421300 chr2B 88.341 446 42 9 1676 2114 689161349 689161791 5.710000e-146 527.0
19 TraesCS7B01G421300 chr5D 88.479 434 42 5 1686 2114 507869989 507869559 3.440000e-143 518.0
20 TraesCS7B01G421300 chr5D 88.399 431 47 3 1686 2114 412064846 412064417 1.240000e-142 516.0
21 TraesCS7B01G421300 chr6B 87.844 436 49 4 1685 2118 46689379 46688946 2.070000e-140 508.0
22 TraesCS7B01G421300 chr1B 87.727 440 47 5 1684 2120 33078062 33077627 7.440000e-140 507.0
23 TraesCS7B01G421300 chr3A 100.000 29 0 0 604 632 8026476 8026504 1.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G421300 chr7B 690257457 690259790 2333 False 4311.0 4311 100.000000 1 2334 1 chr7B.!!$F2 2333
1 TraesCS7B01G421300 chr7B 690251736 690253016 1280 False 1147.0 1147 83.025000 1 1281 1 chr7B.!!$F1 1280
2 TraesCS7B01G421300 chr7B 690302133 690302922 789 False 773.0 773 84.470000 378 1162 1 chr7B.!!$F3 784
3 TraesCS7B01G421300 chr7B 690418385 690419726 1341 False 431.6 693 86.038667 1 1457 3 chr7B.!!$F4 1456
4 TraesCS7B01G421300 chr7D 606320052 606321745 1693 False 1563.0 1563 83.644000 1 1685 1 chr7D.!!$F1 1684
5 TraesCS7B01G421300 chr7D 606536850 606538515 1665 False 1297.0 1297 81.174000 1 1682 1 chr7D.!!$F2 1681
6 TraesCS7B01G421300 chr7D 606341410 606343069 1659 False 883.5 1574 90.761000 1 1685 2 chr7D.!!$F3 1684
7 TraesCS7B01G421300 chr7A 698590746 698592413 1667 False 1293.0 1293 81.127000 1 1682 1 chr7A.!!$F1 1681
8 TraesCS7B01G421300 chrUn 83317284 83318944 1660 False 1214.0 1214 80.222000 1 1682 1 chrUn.!!$F1 1681
9 TraesCS7B01G421300 chrUn 83338684 83340026 1342 False 547.0 582 81.771500 1 1683 2 chrUn.!!$F2 1682

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
707 718 0.261991 TCAGATCTCCTAACGGCCCT 59.738 55.0 0.0 0.0 0.0 5.19 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2206 2315 0.029834 CACACAACCAGCAGCAAGTC 59.97 55.0 0.0 0.0 0.0 3.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
50 51 1.208052 GCTAGGATGTGAGCACCTTCA 59.792 52.381 0.00 0.00 38.62 3.02
75 79 6.699366 TGCAATAATTTGGAGCAATGAAGAA 58.301 32.000 0.00 0.00 33.22 2.52
76 80 6.591062 TGCAATAATTTGGAGCAATGAAGAAC 59.409 34.615 0.00 0.00 33.22 3.01
78 82 3.855689 ATTTGGAGCAATGAAGAACGG 57.144 42.857 0.00 0.00 0.00 4.44
84 88 3.067106 GAGCAATGAAGAACGGTTCAGA 58.933 45.455 21.86 6.34 39.78 3.27
99 103 5.710099 ACGGTTCAGATTGGATTTGTTATGT 59.290 36.000 0.00 0.00 0.00 2.29
119 123 0.747255 ATAGACACGCGAGCTGGAAT 59.253 50.000 15.93 0.00 0.00 3.01
132 136 2.633488 GCTGGAATTAGCTTTCCTCGT 58.367 47.619 16.38 0.00 44.63 4.18
145 149 0.612744 TCCTCGTCCATGCATTGACA 59.387 50.000 25.52 14.32 0.00 3.58
178 182 1.886313 CAGCTAGAGGTGCATGCCG 60.886 63.158 16.68 0.00 36.70 5.69
216 220 2.350772 GCTTGTTCGGTCATTGTGGAAG 60.351 50.000 0.00 0.00 0.00 3.46
226 230 5.241506 CGGTCATTGTGGAAGCCATTATATT 59.758 40.000 0.00 0.00 35.28 1.28
302 309 2.158534 TGTGTAGTGGGCCAACTCAATT 60.159 45.455 18.66 0.00 0.00 2.32
313 320 3.319122 GCCAACTCAATTTGAAGTGACCT 59.681 43.478 0.01 0.00 0.00 3.85
314 321 4.518970 GCCAACTCAATTTGAAGTGACCTA 59.481 41.667 0.01 0.00 0.00 3.08
315 322 5.562890 GCCAACTCAATTTGAAGTGACCTAC 60.563 44.000 0.01 0.00 0.00 3.18
318 325 5.230942 ACTCAATTTGAAGTGACCTACGAG 58.769 41.667 0.01 0.00 0.00 4.18
322 329 5.723672 ATTTGAAGTGACCTACGAGAAGA 57.276 39.130 0.00 0.00 0.00 2.87
324 331 5.723672 TTGAAGTGACCTACGAGAAGAAT 57.276 39.130 0.00 0.00 0.00 2.40
345 352 7.293073 AGAATAAGAAGATTGGCATGTATGGT 58.707 34.615 0.00 0.00 0.00 3.55
355 362 2.545526 GGCATGTATGGTGATCAAGTCG 59.454 50.000 0.00 0.00 0.00 4.18
356 363 3.457234 GCATGTATGGTGATCAAGTCGA 58.543 45.455 0.00 0.00 0.00 4.20
359 366 2.167693 TGTATGGTGATCAAGTCGACCC 59.832 50.000 13.01 4.80 31.15 4.46
389 396 1.346395 TGTTCAAGCAGACCGGTACAT 59.654 47.619 7.34 0.00 0.00 2.29
419 426 1.983481 GCATGGTTGGTGATGCCCA 60.983 57.895 0.00 0.00 39.29 5.36
462 469 2.559668 TCCGACTAACAACTTGGATCGT 59.440 45.455 0.00 0.00 0.00 3.73
469 476 6.873997 ACTAACAACTTGGATCGTCATATCA 58.126 36.000 0.00 0.00 0.00 2.15
486 494 5.367644 TCATATCAAGATTGCTGAAGGGAGA 59.632 40.000 0.00 0.00 0.00 3.71
504 512 3.070018 GAGACATGTCTTTGACAGTGGG 58.930 50.000 28.46 0.00 46.04 4.61
505 513 2.154462 GACATGTCTTTGACAGTGGGG 58.846 52.381 18.83 0.00 46.04 4.96
532 540 3.194116 AGATGTGATGACAATGTTTGCCC 59.806 43.478 0.00 0.00 35.11 5.36
538 546 2.607499 TGACAATGTTTGCCCAATCCT 58.393 42.857 0.00 0.00 0.00 3.24
564 572 2.094700 TGTCCACGATGTCTCAACTAGC 60.095 50.000 0.00 0.00 0.00 3.42
585 596 1.202428 GCTAGTTTGCCTACGGGAGAG 60.202 57.143 0.00 0.00 33.58 3.20
632 643 2.069165 GAGAGGTGCCCCAAGTTGGT 62.069 60.000 20.54 0.24 35.17 3.67
636 647 0.831711 GGTGCCCCAAGTTGGTTGAT 60.832 55.000 20.54 0.00 38.60 2.57
643 654 3.221771 CCCAAGTTGGTTGATGTCTTCA 58.778 45.455 20.54 0.00 38.60 3.02
657 668 2.076863 GTCTTCACCTCGGAAACATGG 58.923 52.381 0.00 0.00 0.00 3.66
666 677 4.261801 CCTCGGAAACATGGACATTTAGT 58.738 43.478 0.00 0.00 0.00 2.24
673 684 4.292186 ACATGGACATTTAGTGAGCTGT 57.708 40.909 0.00 0.00 0.00 4.40
707 718 0.261991 TCAGATCTCCTAACGGCCCT 59.738 55.000 0.00 0.00 0.00 5.19
718 729 2.056906 AACGGCCCTCTGGATATGCC 62.057 60.000 0.00 0.00 38.74 4.40
738 758 2.350498 CCGTAAAGGTTACCGCAGAATG 59.650 50.000 0.00 0.00 35.07 2.67
792 812 3.673484 TTGCGCTCTTGCCCAAGC 61.673 61.111 9.73 0.00 38.28 4.01
796 816 2.034687 GCTCTTGCCCAAGCCTCA 59.965 61.111 3.18 0.00 38.28 3.86
858 878 3.834489 GAGACACTCCACATCATCCAT 57.166 47.619 0.00 0.00 0.00 3.41
920 943 6.286779 ATGGCACCCAGAGGAAATATCCAG 62.287 50.000 0.00 0.00 42.26 3.86
1035 1058 3.118334 AGCTCAAGACCATCAAGATCAGG 60.118 47.826 0.00 0.00 0.00 3.86
1050 1073 4.122670 AGGGGATGCTGGGGCCTA 62.123 66.667 0.84 0.00 37.74 3.93
1100 1123 1.202463 CGGAGACATGAAGAAGCCGAT 60.202 52.381 0.00 0.00 39.62 4.18
1147 1170 2.888863 CTCTGGAGTGGGACGAGC 59.111 66.667 0.00 0.00 0.00 5.03
1209 1232 4.570930 GCTACTACAAGAAGAAACTGCCT 58.429 43.478 0.00 0.00 0.00 4.75
1248 1279 5.127845 CAGGTACTCACTCCTCATGTAACAT 59.872 44.000 0.00 0.00 34.60 2.71
1355 1424 0.792640 CTTACGCTGCACTTCACTGG 59.207 55.000 0.00 0.00 0.00 4.00
1500 1588 2.670401 GCTAGTTGCGTAATCATGGC 57.330 50.000 0.00 0.00 0.00 4.40
1501 1589 2.213499 GCTAGTTGCGTAATCATGGCT 58.787 47.619 0.00 0.00 0.00 4.75
1502 1590 3.390135 GCTAGTTGCGTAATCATGGCTA 58.610 45.455 0.00 0.00 0.00 3.93
1543 1648 1.864711 GCTTCTCACTGCAAACGTGTA 59.135 47.619 4.68 0.00 34.14 2.90
1545 1650 3.678072 GCTTCTCACTGCAAACGTGTATA 59.322 43.478 4.68 0.00 34.14 1.47
1570 1675 1.595382 GTCAGGTGCGAGCTTGTGT 60.595 57.895 2.14 0.00 0.00 3.72
1579 1684 4.368391 AGCTTGTGTTGGCTCTCG 57.632 55.556 0.00 0.00 32.98 4.04
1614 1719 3.056607 GGCTTTCAAATAAGAAGCAGGCA 60.057 43.478 9.21 0.00 33.54 4.75
1615 1720 4.171754 GCTTTCAAATAAGAAGCAGGCAG 58.828 43.478 2.72 0.00 0.00 4.85
1687 1796 1.908483 GAGGGTGCCTCTTAGTGGG 59.092 63.158 2.36 0.00 46.41 4.61
1688 1797 1.616628 AGGGTGCCTCTTAGTGGGG 60.617 63.158 2.36 0.00 0.00 4.96
1689 1798 1.615424 GGGTGCCTCTTAGTGGGGA 60.615 63.158 2.36 0.00 0.00 4.81
1690 1799 0.988678 GGGTGCCTCTTAGTGGGGAT 60.989 60.000 2.36 0.00 0.00 3.85
1691 1800 0.181350 GGTGCCTCTTAGTGGGGATG 59.819 60.000 2.36 0.00 0.00 3.51
1692 1801 0.912486 GTGCCTCTTAGTGGGGATGT 59.088 55.000 2.36 0.00 0.00 3.06
1693 1802 2.116238 GTGCCTCTTAGTGGGGATGTA 58.884 52.381 2.36 0.00 0.00 2.29
1694 1803 2.706190 GTGCCTCTTAGTGGGGATGTAT 59.294 50.000 2.36 0.00 0.00 2.29
1695 1804 2.972713 TGCCTCTTAGTGGGGATGTATC 59.027 50.000 2.36 0.00 0.00 2.24
1696 1805 3.243724 GCCTCTTAGTGGGGATGTATCT 58.756 50.000 2.36 0.00 0.00 1.98
1697 1806 4.140782 TGCCTCTTAGTGGGGATGTATCTA 60.141 45.833 2.36 0.00 0.00 1.98
1698 1807 4.464597 GCCTCTTAGTGGGGATGTATCTAG 59.535 50.000 2.36 0.00 0.00 2.43
1699 1808 5.646215 CCTCTTAGTGGGGATGTATCTAGT 58.354 45.833 0.00 0.00 0.00 2.57
1700 1809 5.478679 CCTCTTAGTGGGGATGTATCTAGTG 59.521 48.000 0.00 0.00 0.00 2.74
1701 1810 4.833380 TCTTAGTGGGGATGTATCTAGTGC 59.167 45.833 0.00 0.00 0.00 4.40
1702 1811 3.046283 AGTGGGGATGTATCTAGTGCA 57.954 47.619 0.00 0.00 0.00 4.57
1703 1812 2.700897 AGTGGGGATGTATCTAGTGCAC 59.299 50.000 9.40 9.40 0.00 4.57
1704 1813 2.047061 TGGGGATGTATCTAGTGCACC 58.953 52.381 14.63 0.00 0.00 5.01
1705 1814 1.348036 GGGGATGTATCTAGTGCACCC 59.652 57.143 14.63 2.83 34.98 4.61
1706 1815 1.000955 GGGATGTATCTAGTGCACCCG 59.999 57.143 14.63 4.79 29.46 5.28
1707 1816 1.687123 GGATGTATCTAGTGCACCCGT 59.313 52.381 14.63 0.00 0.00 5.28
1708 1817 2.545952 GGATGTATCTAGTGCACCCGTG 60.546 54.545 14.63 1.25 0.00 4.94
1727 1836 1.506262 CAATTGGTGCTACCGGTGC 59.494 57.895 19.93 19.04 42.58 5.01
1728 1837 1.074072 AATTGGTGCTACCGGTGCA 59.926 52.632 19.93 21.51 42.58 4.57
1729 1838 0.323360 AATTGGTGCTACCGGTGCAT 60.323 50.000 26.82 13.56 42.58 3.96
1730 1839 0.748005 ATTGGTGCTACCGGTGCATC 60.748 55.000 26.82 26.35 42.58 3.91
1731 1840 2.890474 GGTGCTACCGGTGCATCG 60.890 66.667 26.82 13.72 42.69 3.84
1743 1852 2.202783 GCATCGGTTGCCCATTGC 60.203 61.111 0.00 0.00 46.15 3.56
1754 1863 2.252976 GCCCATTGCAGGTTCAAAAA 57.747 45.000 0.00 0.00 40.77 1.94
1755 1864 2.781923 GCCCATTGCAGGTTCAAAAAT 58.218 42.857 0.00 0.00 40.77 1.82
1756 1865 3.936564 GCCCATTGCAGGTTCAAAAATA 58.063 40.909 0.00 0.00 40.77 1.40
1757 1866 4.516323 GCCCATTGCAGGTTCAAAAATAT 58.484 39.130 0.00 0.00 40.77 1.28
1758 1867 4.943093 GCCCATTGCAGGTTCAAAAATATT 59.057 37.500 0.00 0.00 40.77 1.28
1759 1868 5.065090 GCCCATTGCAGGTTCAAAAATATTC 59.935 40.000 0.00 0.00 40.77 1.75
1760 1869 6.171921 CCCATTGCAGGTTCAAAAATATTCA 58.828 36.000 0.00 0.00 0.00 2.57
1761 1870 6.654161 CCCATTGCAGGTTCAAAAATATTCAA 59.346 34.615 0.00 0.00 0.00 2.69
1762 1871 7.174599 CCCATTGCAGGTTCAAAAATATTCAAA 59.825 33.333 0.00 0.00 0.00 2.69
1763 1872 8.566260 CCATTGCAGGTTCAAAAATATTCAAAA 58.434 29.630 0.00 0.00 0.00 2.44
1764 1873 9.947669 CATTGCAGGTTCAAAAATATTCAAAAA 57.052 25.926 0.00 0.00 0.00 1.94
1799 1908 7.642071 AAAAATAGTGCATTGACACAACATC 57.358 32.000 11.85 0.00 43.23 3.06
1800 1909 5.963176 AATAGTGCATTGACACAACATCA 57.037 34.783 11.85 0.00 43.23 3.07
1801 1910 5.963176 ATAGTGCATTGACACAACATCAA 57.037 34.783 11.85 0.00 43.23 2.57
1802 1911 4.859304 AGTGCATTGACACAACATCAAT 57.141 36.364 11.85 0.00 45.57 2.57
1808 1917 5.940192 ATTGACACAACATCAATGTACGT 57.060 34.783 0.00 0.00 43.54 3.57
1809 1918 5.743026 TTGACACAACATCAATGTACGTT 57.257 34.783 0.00 0.00 40.80 3.99
1810 1919 5.089396 TGACACAACATCAATGTACGTTG 57.911 39.130 19.82 19.82 40.80 4.10
1812 1921 5.090652 ACACAACATCAATGTACGTTGTC 57.909 39.130 23.68 0.00 46.70 3.18
1813 1922 4.572795 ACACAACATCAATGTACGTTGTCA 59.427 37.500 23.68 9.28 46.70 3.58
1814 1923 4.903585 CACAACATCAATGTACGTTGTCAC 59.096 41.667 23.68 0.00 46.70 3.67
1815 1924 4.572795 ACAACATCAATGTACGTTGTCACA 59.427 37.500 23.68 8.29 46.70 3.58
1816 1925 5.065346 ACAACATCAATGTACGTTGTCACAA 59.935 36.000 23.68 7.95 46.70 3.33
1817 1926 5.743026 ACATCAATGTACGTTGTCACAAA 57.257 34.783 23.68 7.29 39.68 2.83
1818 1927 6.125327 ACATCAATGTACGTTGTCACAAAA 57.875 33.333 23.68 6.64 39.68 2.44
1819 1928 6.556212 ACATCAATGTACGTTGTCACAAAAA 58.444 32.000 23.68 5.97 39.68 1.94
1820 1929 7.199766 ACATCAATGTACGTTGTCACAAAAAT 58.800 30.769 23.68 7.85 39.68 1.82
1821 1930 7.704472 ACATCAATGTACGTTGTCACAAAAATT 59.296 29.630 23.68 0.00 39.68 1.82
1822 1931 8.538856 CATCAATGTACGTTGTCACAAAAATTT 58.461 29.630 23.68 0.00 0.00 1.82
1823 1932 8.109843 TCAATGTACGTTGTCACAAAAATTTC 57.890 30.769 23.68 0.00 0.00 2.17
1824 1933 7.755373 TCAATGTACGTTGTCACAAAAATTTCA 59.245 29.630 23.68 0.68 0.00 2.69
1825 1934 8.376203 CAATGTACGTTGTCACAAAAATTTCAA 58.624 29.630 18.01 0.00 0.00 2.69
1826 1935 8.641499 ATGTACGTTGTCACAAAAATTTCAAT 57.359 26.923 0.00 0.00 0.00 2.57
1827 1936 8.109843 TGTACGTTGTCACAAAAATTTCAATC 57.890 30.769 0.00 0.00 0.00 2.67
1828 1937 7.755373 TGTACGTTGTCACAAAAATTTCAATCA 59.245 29.630 0.00 0.00 0.00 2.57
1829 1938 7.588143 ACGTTGTCACAAAAATTTCAATCAA 57.412 28.000 0.00 0.00 0.00 2.57
1830 1939 8.023050 ACGTTGTCACAAAAATTTCAATCAAA 57.977 26.923 0.00 0.00 0.00 2.69
1831 1940 8.499162 ACGTTGTCACAAAAATTTCAATCAAAA 58.501 25.926 0.00 0.00 0.00 2.44
1832 1941 9.488124 CGTTGTCACAAAAATTTCAATCAAAAT 57.512 25.926 0.00 0.00 0.00 1.82
1835 1944 9.699985 TGTCACAAAAATTTCAATCAAAATTCG 57.300 25.926 0.00 0.00 37.75 3.34
1836 1945 9.913451 GTCACAAAAATTTCAATCAAAATTCGA 57.087 25.926 0.00 0.00 37.75 3.71
1847 1956 9.526713 TTCAATCAAAATTCGAAACATTTCTCA 57.473 25.926 0.00 0.00 35.07 3.27
1848 1957 9.526713 TCAATCAAAATTCGAAACATTTCTCAA 57.473 25.926 0.00 0.00 35.07 3.02
1849 1958 9.787626 CAATCAAAATTCGAAACATTTCTCAAG 57.212 29.630 0.00 0.00 35.07 3.02
1850 1959 9.748708 AATCAAAATTCGAAACATTTCTCAAGA 57.251 25.926 0.00 0.00 35.07 3.02
1851 1960 9.918630 ATCAAAATTCGAAACATTTCTCAAGAT 57.081 25.926 0.00 1.18 35.07 2.40
1891 2000 9.719355 ATTTGACACTGAATAGTACATAACACA 57.281 29.630 0.00 0.00 34.74 3.72
1892 2001 9.549078 TTTGACACTGAATAGTACATAACACAA 57.451 29.630 0.00 0.00 34.74 3.33
1893 2002 8.757164 TGACACTGAATAGTACATAACACAAG 57.243 34.615 0.00 0.00 34.74 3.16
1894 2003 8.364894 TGACACTGAATAGTACATAACACAAGT 58.635 33.333 0.00 0.00 34.74 3.16
1895 2004 9.204570 GACACTGAATAGTACATAACACAAGTT 57.795 33.333 0.00 0.00 37.27 2.66
1896 2005 8.988934 ACACTGAATAGTACATAACACAAGTTG 58.011 33.333 0.00 0.00 35.32 3.16
1897 2006 8.443160 CACTGAATAGTACATAACACAAGTTGG 58.557 37.037 7.96 0.00 35.32 3.77
1898 2007 7.606456 ACTGAATAGTACATAACACAAGTTGGG 59.394 37.037 2.79 2.79 35.32 4.12
1899 2008 6.373216 TGAATAGTACATAACACAAGTTGGGC 59.627 38.462 4.63 0.00 38.69 5.36
1900 2009 4.367039 AGTACATAACACAAGTTGGGCT 57.633 40.909 4.63 0.00 38.69 5.19
1901 2010 4.725490 AGTACATAACACAAGTTGGGCTT 58.275 39.130 4.63 1.74 38.69 4.35
1902 2011 4.760204 AGTACATAACACAAGTTGGGCTTC 59.240 41.667 4.63 0.00 38.69 3.86
1903 2012 3.561143 ACATAACACAAGTTGGGCTTCA 58.439 40.909 4.63 0.00 38.69 3.02
1904 2013 3.569701 ACATAACACAAGTTGGGCTTCAG 59.430 43.478 4.63 0.00 38.69 3.02
1905 2014 2.143876 AACACAAGTTGGGCTTCAGT 57.856 45.000 4.63 0.00 36.39 3.41
1906 2015 2.143876 ACACAAGTTGGGCTTCAGTT 57.856 45.000 4.63 0.00 34.69 3.16
1907 2016 2.456577 ACACAAGTTGGGCTTCAGTTT 58.543 42.857 4.63 0.00 34.69 2.66
1908 2017 2.831526 ACACAAGTTGGGCTTCAGTTTT 59.168 40.909 4.63 0.00 34.69 2.43
1909 2018 3.189285 CACAAGTTGGGCTTCAGTTTTG 58.811 45.455 7.96 0.00 34.69 2.44
1910 2019 2.168313 ACAAGTTGGGCTTCAGTTTTGG 59.832 45.455 7.96 0.00 34.69 3.28
1911 2020 0.752658 AGTTGGGCTTCAGTTTTGGC 59.247 50.000 0.00 0.00 0.00 4.52
1912 2021 0.249868 GTTGGGCTTCAGTTTTGGCC 60.250 55.000 0.00 0.00 45.24 5.36
1914 2023 3.869481 GGCTTCAGTTTTGGCCCA 58.131 55.556 0.00 0.00 38.77 5.36
1915 2024 2.365410 GGCTTCAGTTTTGGCCCAT 58.635 52.632 0.00 0.00 38.77 4.00
1916 2025 0.686789 GGCTTCAGTTTTGGCCCATT 59.313 50.000 0.00 0.00 38.77 3.16
1917 2026 1.899142 GGCTTCAGTTTTGGCCCATTA 59.101 47.619 0.00 0.00 38.77 1.90
1918 2027 2.094026 GGCTTCAGTTTTGGCCCATTAG 60.094 50.000 0.00 0.00 38.77 1.73
1919 2028 2.825532 GCTTCAGTTTTGGCCCATTAGA 59.174 45.455 0.00 0.00 0.00 2.10
1920 2029 3.258123 GCTTCAGTTTTGGCCCATTAGAA 59.742 43.478 0.00 0.00 0.00 2.10
1921 2030 4.081476 GCTTCAGTTTTGGCCCATTAGAAT 60.081 41.667 0.00 0.00 0.00 2.40
1922 2031 5.127031 GCTTCAGTTTTGGCCCATTAGAATA 59.873 40.000 0.00 0.00 0.00 1.75
1923 2032 6.183360 GCTTCAGTTTTGGCCCATTAGAATAT 60.183 38.462 0.00 0.00 0.00 1.28
1924 2033 7.633553 GCTTCAGTTTTGGCCCATTAGAATATT 60.634 37.037 0.00 0.00 0.00 1.28
1925 2034 7.111247 TCAGTTTTGGCCCATTAGAATATTG 57.889 36.000 0.00 0.00 0.00 1.90
1926 2035 6.894654 TCAGTTTTGGCCCATTAGAATATTGA 59.105 34.615 0.00 0.00 0.00 2.57
1927 2036 6.980397 CAGTTTTGGCCCATTAGAATATTGAC 59.020 38.462 0.00 0.00 0.00 3.18
1928 2037 5.766150 TTTGGCCCATTAGAATATTGACG 57.234 39.130 0.00 0.00 0.00 4.35
1929 2038 4.431416 TGGCCCATTAGAATATTGACGT 57.569 40.909 0.00 0.00 0.00 4.34
1930 2039 4.385825 TGGCCCATTAGAATATTGACGTC 58.614 43.478 9.11 9.11 0.00 4.34
1931 2040 4.141597 TGGCCCATTAGAATATTGACGTCA 60.142 41.667 15.76 15.76 0.00 4.35
1932 2041 4.819630 GGCCCATTAGAATATTGACGTCAA 59.180 41.667 31.41 31.41 40.51 3.18
1933 2042 5.298276 GGCCCATTAGAATATTGACGTCAAA 59.702 40.000 32.69 21.74 39.55 2.69
1934 2043 6.016276 GGCCCATTAGAATATTGACGTCAAAT 60.016 38.462 32.69 22.82 39.55 2.32
1935 2044 7.425606 GCCCATTAGAATATTGACGTCAAATT 58.574 34.615 32.69 28.15 39.55 1.82
1936 2045 8.564574 GCCCATTAGAATATTGACGTCAAATTA 58.435 33.333 32.69 22.04 39.55 1.40
1950 2059 9.820229 TGACGTCAAATTAGTCATTTTTGTATC 57.180 29.630 17.62 0.00 39.63 2.24
1960 2069 9.844790 TTAGTCATTTTTGTATCTTGAGCATTG 57.155 29.630 0.00 0.00 0.00 2.82
1961 2070 7.889469 AGTCATTTTTGTATCTTGAGCATTGT 58.111 30.769 0.00 0.00 0.00 2.71
1962 2071 8.362639 AGTCATTTTTGTATCTTGAGCATTGTT 58.637 29.630 0.00 0.00 0.00 2.83
1963 2072 8.981647 GTCATTTTTGTATCTTGAGCATTGTTT 58.018 29.630 0.00 0.00 0.00 2.83
1964 2073 9.545105 TCATTTTTGTATCTTGAGCATTGTTTT 57.455 25.926 0.00 0.00 0.00 2.43
1965 2074 9.588774 CATTTTTGTATCTTGAGCATTGTTTTG 57.411 29.630 0.00 0.00 0.00 2.44
1966 2075 8.939201 TTTTTGTATCTTGAGCATTGTTTTGA 57.061 26.923 0.00 0.00 0.00 2.69
1967 2076 8.939201 TTTTGTATCTTGAGCATTGTTTTGAA 57.061 26.923 0.00 0.00 0.00 2.69
1968 2077 9.545105 TTTTGTATCTTGAGCATTGTTTTGAAT 57.455 25.926 0.00 0.00 0.00 2.57
1969 2078 9.545105 TTTGTATCTTGAGCATTGTTTTGAATT 57.455 25.926 0.00 0.00 0.00 2.17
1970 2079 9.545105 TTGTATCTTGAGCATTGTTTTGAATTT 57.455 25.926 0.00 0.00 0.00 1.82
1971 2080 9.545105 TGTATCTTGAGCATTGTTTTGAATTTT 57.455 25.926 0.00 0.00 0.00 1.82
1972 2081 9.801714 GTATCTTGAGCATTGTTTTGAATTTTG 57.198 29.630 0.00 0.00 0.00 2.44
1973 2082 8.665643 ATCTTGAGCATTGTTTTGAATTTTGA 57.334 26.923 0.00 0.00 0.00 2.69
1974 2083 8.665643 TCTTGAGCATTGTTTTGAATTTTGAT 57.334 26.923 0.00 0.00 0.00 2.57
1975 2084 9.111613 TCTTGAGCATTGTTTTGAATTTTGATT 57.888 25.926 0.00 0.00 0.00 2.57
1976 2085 9.724839 CTTGAGCATTGTTTTGAATTTTGATTT 57.275 25.926 0.00 0.00 0.00 2.17
1977 2086 9.504710 TTGAGCATTGTTTTGAATTTTGATTTG 57.495 25.926 0.00 0.00 0.00 2.32
1978 2087 8.890718 TGAGCATTGTTTTGAATTTTGATTTGA 58.109 25.926 0.00 0.00 0.00 2.69
1979 2088 9.719279 GAGCATTGTTTTGAATTTTGATTTGAA 57.281 25.926 0.00 0.00 0.00 2.69
1997 2106 9.591792 TGATTTGAATTTTTGTGACAACATACA 57.408 25.926 0.00 0.00 35.83 2.29
2001 2110 9.591792 TTGAATTTTTGTGACAACATACATTGA 57.408 25.926 0.00 0.00 35.83 2.57
2002 2111 9.761504 TGAATTTTTGTGACAACATACATTGAT 57.238 25.926 0.00 0.00 35.83 2.57
2004 2113 9.545105 AATTTTTGTGACAACATACATTGATGT 57.455 25.926 0.00 1.84 43.33 3.06
2013 2122 6.741992 AACATACATTGATGTTGTGTCGAT 57.258 33.333 1.46 0.00 46.00 3.59
2014 2123 6.110543 ACATACATTGATGTTGTGTCGATG 57.889 37.500 1.46 1.38 41.97 3.84
2015 2124 3.476295 ACATTGATGTTGTGTCGATGC 57.524 42.857 0.00 0.00 39.89 3.91
2016 2125 2.813172 ACATTGATGTTGTGTCGATGCA 59.187 40.909 0.00 0.00 39.89 3.96
2017 2126 3.441222 ACATTGATGTTGTGTCGATGCAT 59.559 39.130 0.00 0.00 39.89 3.96
2018 2127 4.082625 ACATTGATGTTGTGTCGATGCATT 60.083 37.500 0.00 0.00 39.89 3.56
2019 2128 5.123661 ACATTGATGTTGTGTCGATGCATTA 59.876 36.000 0.00 0.00 39.89 1.90
2020 2129 5.619625 TTGATGTTGTGTCGATGCATTAA 57.380 34.783 0.00 0.00 0.00 1.40
2021 2130 5.816449 TGATGTTGTGTCGATGCATTAAT 57.184 34.783 0.00 0.00 0.00 1.40
2022 2131 6.917217 TGATGTTGTGTCGATGCATTAATA 57.083 33.333 0.00 0.00 0.00 0.98
2023 2132 7.495135 TGATGTTGTGTCGATGCATTAATAT 57.505 32.000 0.00 0.00 0.00 1.28
2024 2133 7.929159 TGATGTTGTGTCGATGCATTAATATT 58.071 30.769 0.00 0.00 0.00 1.28
2025 2134 8.404765 TGATGTTGTGTCGATGCATTAATATTT 58.595 29.630 0.00 0.00 0.00 1.40
2026 2135 9.236691 GATGTTGTGTCGATGCATTAATATTTT 57.763 29.630 0.00 0.00 0.00 1.82
2027 2136 8.978564 TGTTGTGTCGATGCATTAATATTTTT 57.021 26.923 0.00 0.00 0.00 1.94
2056 2165 9.699985 TGAATTTTTCGAACATTTTTGAATGTG 57.300 25.926 0.00 0.00 42.13 3.21
2057 2166 8.545749 AATTTTTCGAACATTTTTGAATGTGC 57.454 26.923 0.00 3.25 42.13 4.57
2058 2167 6.653273 TTTTCGAACATTTTTGAATGTGCA 57.347 29.167 0.00 0.00 42.13 4.57
2059 2168 6.653273 TTTCGAACATTTTTGAATGTGCAA 57.347 29.167 0.00 2.60 42.13 4.08
2060 2169 6.841443 TTCGAACATTTTTGAATGTGCAAT 57.159 29.167 10.07 0.00 42.13 3.56
2061 2170 6.212934 TCGAACATTTTTGAATGTGCAATG 57.787 33.333 10.07 0.00 42.13 2.82
2062 2171 5.177142 TCGAACATTTTTGAATGTGCAATGG 59.823 36.000 10.07 0.00 42.13 3.16
2063 2172 5.615106 CGAACATTTTTGAATGTGCAATGGG 60.615 40.000 10.07 0.00 42.13 4.00
2064 2173 4.073549 ACATTTTTGAATGTGCAATGGGG 58.926 39.130 4.14 0.00 41.46 4.96
2065 2174 3.853355 TTTTTGAATGTGCAATGGGGT 57.147 38.095 0.00 0.00 0.00 4.95
2066 2175 3.399440 TTTTGAATGTGCAATGGGGTC 57.601 42.857 0.00 0.00 0.00 4.46
2067 2176 1.265236 TTGAATGTGCAATGGGGTCC 58.735 50.000 0.00 0.00 0.00 4.46
2068 2177 0.964860 TGAATGTGCAATGGGGTCCG 60.965 55.000 0.00 0.00 0.00 4.79
2069 2178 1.666209 GAATGTGCAATGGGGTCCGG 61.666 60.000 0.00 0.00 0.00 5.14
2087 2196 2.435938 CGCACCGGTAGCACCAAT 60.436 61.111 22.90 0.00 38.47 3.16
2088 2197 2.038269 CGCACCGGTAGCACCAATT 61.038 57.895 22.90 0.00 38.47 2.32
2089 2198 0.741574 CGCACCGGTAGCACCAATTA 60.742 55.000 22.90 0.00 38.47 1.40
2090 2199 1.455248 GCACCGGTAGCACCAATTAA 58.545 50.000 19.85 0.00 38.47 1.40
2091 2200 1.400494 GCACCGGTAGCACCAATTAAG 59.600 52.381 19.85 0.31 38.47 1.85
2092 2201 1.400494 CACCGGTAGCACCAATTAAGC 59.600 52.381 6.87 0.00 38.47 3.09
2093 2202 1.021968 CCGGTAGCACCAATTAAGCC 58.978 55.000 0.00 0.00 38.47 4.35
2094 2203 0.655733 CGGTAGCACCAATTAAGCCG 59.344 55.000 6.21 0.00 38.47 5.52
2095 2204 1.021968 GGTAGCACCAATTAAGCCGG 58.978 55.000 0.00 0.00 38.42 6.13
2096 2205 1.680860 GGTAGCACCAATTAAGCCGGT 60.681 52.381 1.90 0.00 38.42 5.28
2099 2208 2.262183 CACCAATTAAGCCGGTGCA 58.738 52.632 1.90 0.00 43.43 4.57
2100 2209 0.109319 CACCAATTAAGCCGGTGCAC 60.109 55.000 8.80 8.80 43.43 4.57
2101 2210 1.248101 ACCAATTAAGCCGGTGCACC 61.248 55.000 26.78 26.78 41.13 5.01
2102 2211 1.247419 CCAATTAAGCCGGTGCACCA 61.247 55.000 34.16 15.28 41.13 4.17
2103 2212 0.171007 CAATTAAGCCGGTGCACCAG 59.829 55.000 34.16 25.33 41.13 4.00
2104 2213 0.037590 AATTAAGCCGGTGCACCAGA 59.962 50.000 34.16 13.61 41.13 3.86
2105 2214 0.255890 ATTAAGCCGGTGCACCAGAT 59.744 50.000 34.16 21.11 41.13 2.90
2106 2215 0.906066 TTAAGCCGGTGCACCAGATA 59.094 50.000 34.16 18.24 41.13 1.98
2107 2216 0.177141 TAAGCCGGTGCACCAGATAC 59.823 55.000 34.16 17.93 41.13 2.24
2108 2217 2.852495 AAGCCGGTGCACCAGATACG 62.852 60.000 34.16 19.00 41.13 3.06
2109 2218 2.577059 CCGGTGCACCAGATACGT 59.423 61.111 34.16 0.00 35.14 3.57
2110 2219 1.809619 CCGGTGCACCAGATACGTG 60.810 63.158 34.16 15.69 35.14 4.49
2115 2224 2.890474 CACCAGATACGTGCCCGC 60.890 66.667 0.00 0.00 37.70 6.13
2116 2225 4.157120 ACCAGATACGTGCCCGCC 62.157 66.667 0.00 0.00 37.70 6.13
2117 2226 3.849951 CCAGATACGTGCCCGCCT 61.850 66.667 0.00 0.00 37.70 5.52
2118 2227 2.279517 CAGATACGTGCCCGCCTC 60.280 66.667 0.00 0.00 37.70 4.70
2119 2228 2.442272 AGATACGTGCCCGCCTCT 60.442 61.111 0.00 0.00 37.70 3.69
2120 2229 2.058595 AGATACGTGCCCGCCTCTT 61.059 57.895 0.00 0.00 37.70 2.85
2121 2230 0.754217 AGATACGTGCCCGCCTCTTA 60.754 55.000 0.00 0.00 37.70 2.10
2122 2231 0.318784 GATACGTGCCCGCCTCTTAG 60.319 60.000 0.00 0.00 37.70 2.18
2123 2232 1.041447 ATACGTGCCCGCCTCTTAGT 61.041 55.000 0.00 0.00 37.70 2.24
2124 2233 1.252904 TACGTGCCCGCCTCTTAGTT 61.253 55.000 0.00 0.00 37.70 2.24
2125 2234 2.100631 CGTGCCCGCCTCTTAGTTG 61.101 63.158 0.00 0.00 0.00 3.16
2126 2235 1.003718 GTGCCCGCCTCTTAGTTGT 60.004 57.895 0.00 0.00 0.00 3.32
2127 2236 1.003839 TGCCCGCCTCTTAGTTGTG 60.004 57.895 0.00 0.00 0.00 3.33
2128 2237 1.003718 GCCCGCCTCTTAGTTGTGT 60.004 57.895 0.00 0.00 0.00 3.72
2129 2238 1.298859 GCCCGCCTCTTAGTTGTGTG 61.299 60.000 0.00 0.00 0.00 3.82
2130 2239 0.034896 CCCGCCTCTTAGTTGTGTGT 59.965 55.000 0.00 0.00 0.00 3.72
2131 2240 1.148310 CCGCCTCTTAGTTGTGTGTG 58.852 55.000 0.00 0.00 0.00 3.82
2132 2241 0.512952 CGCCTCTTAGTTGTGTGTGC 59.487 55.000 0.00 0.00 0.00 4.57
2133 2242 1.873903 CGCCTCTTAGTTGTGTGTGCT 60.874 52.381 0.00 0.00 0.00 4.40
2134 2243 2.222027 GCCTCTTAGTTGTGTGTGCTT 58.778 47.619 0.00 0.00 0.00 3.91
2135 2244 2.031682 GCCTCTTAGTTGTGTGTGCTTG 60.032 50.000 0.00 0.00 0.00 4.01
2136 2245 3.206150 CCTCTTAGTTGTGTGTGCTTGT 58.794 45.455 0.00 0.00 0.00 3.16
2137 2246 3.002656 CCTCTTAGTTGTGTGTGCTTGTG 59.997 47.826 0.00 0.00 0.00 3.33
2138 2247 3.605634 TCTTAGTTGTGTGTGCTTGTGT 58.394 40.909 0.00 0.00 0.00 3.72
2139 2248 3.373748 TCTTAGTTGTGTGTGCTTGTGTG 59.626 43.478 0.00 0.00 0.00 3.82
2140 2249 0.171007 AGTTGTGTGTGCTTGTGTGC 59.829 50.000 0.00 0.00 0.00 4.57
2141 2250 0.109365 GTTGTGTGTGCTTGTGTGCA 60.109 50.000 0.00 0.00 41.05 4.57
2142 2251 0.816373 TTGTGTGTGCTTGTGTGCAT 59.184 45.000 0.00 0.00 45.23 3.96
2143 2252 0.381445 TGTGTGTGCTTGTGTGCATC 59.619 50.000 0.00 0.00 45.23 3.91
2144 2253 0.664761 GTGTGTGCTTGTGTGCATCT 59.335 50.000 0.00 0.00 45.23 2.90
2145 2254 1.872952 GTGTGTGCTTGTGTGCATCTA 59.127 47.619 0.00 0.00 45.23 1.98
2146 2255 1.872952 TGTGTGCTTGTGTGCATCTAC 59.127 47.619 0.00 0.00 45.23 2.59
2147 2256 1.872952 GTGTGCTTGTGTGCATCTACA 59.127 47.619 0.00 0.00 45.23 2.74
2148 2257 2.485426 GTGTGCTTGTGTGCATCTACAT 59.515 45.455 0.00 0.00 45.23 2.29
2149 2258 2.485038 TGTGCTTGTGTGCATCTACATG 59.515 45.455 0.00 0.01 45.23 3.21
2150 2259 2.743664 GTGCTTGTGTGCATCTACATGA 59.256 45.455 0.00 0.00 45.23 3.07
2151 2260 2.743664 TGCTTGTGTGCATCTACATGAC 59.256 45.455 0.00 8.87 38.12 3.06
2152 2261 3.005554 GCTTGTGTGCATCTACATGACT 58.994 45.455 0.00 0.00 32.43 3.41
2153 2262 3.181513 GCTTGTGTGCATCTACATGACTG 60.182 47.826 0.00 0.00 32.43 3.51
2154 2263 2.349590 TGTGTGCATCTACATGACTGC 58.650 47.619 0.00 3.19 32.43 4.40
2155 2264 1.325640 GTGTGCATCTACATGACTGCG 59.674 52.381 0.00 0.00 34.34 5.18
2156 2265 1.066929 TGTGCATCTACATGACTGCGT 60.067 47.619 0.00 0.00 34.34 5.24
2157 2266 1.325640 GTGCATCTACATGACTGCGTG 59.674 52.381 0.00 0.00 34.34 5.34
2158 2267 0.933097 GCATCTACATGACTGCGTGG 59.067 55.000 0.00 0.00 35.29 4.94
2159 2268 1.740380 GCATCTACATGACTGCGTGGT 60.740 52.381 0.00 0.00 35.29 4.16
2160 2269 1.929169 CATCTACATGACTGCGTGGTG 59.071 52.381 0.00 0.00 35.29 4.17
2161 2270 0.966179 TCTACATGACTGCGTGGTGT 59.034 50.000 0.00 0.00 35.29 4.16
2162 2271 1.070821 CTACATGACTGCGTGGTGTG 58.929 55.000 0.00 0.00 35.29 3.82
2163 2272 0.320334 TACATGACTGCGTGGTGTGG 60.320 55.000 0.00 0.00 35.29 4.17
2164 2273 2.669569 ATGACTGCGTGGTGTGGC 60.670 61.111 0.00 0.00 0.00 5.01
2165 2274 3.182590 ATGACTGCGTGGTGTGGCT 62.183 57.895 0.00 0.00 0.00 4.75
2166 2275 2.591715 GACTGCGTGGTGTGGCTT 60.592 61.111 0.00 0.00 0.00 4.35
2167 2276 2.896801 GACTGCGTGGTGTGGCTTG 61.897 63.158 0.00 0.00 0.00 4.01
2168 2277 2.591429 CTGCGTGGTGTGGCTTGA 60.591 61.111 0.00 0.00 0.00 3.02
2169 2278 2.591429 TGCGTGGTGTGGCTTGAG 60.591 61.111 0.00 0.00 0.00 3.02
2170 2279 2.280797 GCGTGGTGTGGCTTGAGA 60.281 61.111 0.00 0.00 0.00 3.27
2171 2280 2.320587 GCGTGGTGTGGCTTGAGAG 61.321 63.158 0.00 0.00 0.00 3.20
2172 2281 1.069765 CGTGGTGTGGCTTGAGAGT 59.930 57.895 0.00 0.00 0.00 3.24
2173 2282 1.224069 CGTGGTGTGGCTTGAGAGTG 61.224 60.000 0.00 0.00 0.00 3.51
2174 2283 0.179045 GTGGTGTGGCTTGAGAGTGT 60.179 55.000 0.00 0.00 0.00 3.55
2175 2284 0.179048 TGGTGTGGCTTGAGAGTGTG 60.179 55.000 0.00 0.00 0.00 3.82
2176 2285 1.510480 GGTGTGGCTTGAGAGTGTGC 61.510 60.000 0.00 0.00 0.00 4.57
2177 2286 1.227943 TGTGGCTTGAGAGTGTGCC 60.228 57.895 0.00 0.00 45.10 5.01
2178 2287 1.072159 GTGGCTTGAGAGTGTGCCT 59.928 57.895 0.00 0.00 45.11 4.75
2179 2288 1.071987 TGGCTTGAGAGTGTGCCTG 59.928 57.895 0.00 0.00 45.11 4.85
2180 2289 2.331132 GGCTTGAGAGTGTGCCTGC 61.331 63.158 0.00 0.00 41.92 4.85
2181 2290 2.331132 GCTTGAGAGTGTGCCTGCC 61.331 63.158 0.00 0.00 0.00 4.85
2182 2291 1.374190 CTTGAGAGTGTGCCTGCCT 59.626 57.895 0.00 0.00 0.00 4.75
2183 2292 0.954449 CTTGAGAGTGTGCCTGCCTG 60.954 60.000 0.00 0.00 0.00 4.85
2184 2293 2.745492 GAGAGTGTGCCTGCCTGC 60.745 66.667 0.00 0.00 0.00 4.85
2185 2294 3.247648 AGAGTGTGCCTGCCTGCT 61.248 61.111 0.00 0.00 0.00 4.24
2186 2295 2.282040 GAGTGTGCCTGCCTGCTT 60.282 61.111 0.00 0.00 0.00 3.91
2187 2296 2.596631 AGTGTGCCTGCCTGCTTG 60.597 61.111 0.00 0.00 0.00 4.01
2188 2297 3.677648 GTGTGCCTGCCTGCTTGG 61.678 66.667 0.00 0.00 39.35 3.61
2189 2298 4.208403 TGTGCCTGCCTGCTTGGT 62.208 61.111 0.00 0.00 38.35 3.67
2190 2299 3.677648 GTGCCTGCCTGCTTGGTG 61.678 66.667 0.00 0.00 38.35 4.17
2191 2300 4.208403 TGCCTGCCTGCTTGGTGT 62.208 61.111 0.00 0.00 38.35 4.16
2192 2301 3.677648 GCCTGCCTGCTTGGTGTG 61.678 66.667 0.00 0.00 38.35 3.82
2193 2302 3.677648 CCTGCCTGCTTGGTGTGC 61.678 66.667 0.00 0.00 38.35 4.57
2194 2303 2.908428 CTGCCTGCTTGGTGTGCA 60.908 61.111 0.00 0.00 38.35 4.57
2195 2304 2.203523 TGCCTGCTTGGTGTGCAT 60.204 55.556 0.00 0.00 39.86 3.96
2196 2305 2.209064 CTGCCTGCTTGGTGTGCATC 62.209 60.000 0.00 0.00 39.86 3.91
2197 2306 2.270257 GCCTGCTTGGTGTGCATCA 61.270 57.895 0.00 0.00 39.86 3.07
2198 2307 1.880894 CCTGCTTGGTGTGCATCAG 59.119 57.895 0.00 0.00 39.86 2.90
2199 2308 1.211969 CTGCTTGGTGTGCATCAGC 59.788 57.895 10.34 10.34 43.90 4.26
2200 2309 1.228337 TGCTTGGTGTGCATCAGCT 60.228 52.632 15.88 0.00 43.97 4.24
2201 2310 1.211969 GCTTGGTGTGCATCAGCTG 59.788 57.895 7.63 7.63 43.97 4.24
2202 2311 1.521450 GCTTGGTGTGCATCAGCTGT 61.521 55.000 14.67 0.00 43.97 4.40
2203 2312 0.240145 CTTGGTGTGCATCAGCTGTG 59.760 55.000 14.67 12.33 43.97 3.66
2204 2313 0.466007 TTGGTGTGCATCAGCTGTGT 60.466 50.000 14.67 0.58 43.97 3.72
2205 2314 1.167781 TGGTGTGCATCAGCTGTGTG 61.168 55.000 14.67 14.70 43.97 3.82
2206 2315 1.577922 GTGTGCATCAGCTGTGTGG 59.422 57.895 14.67 3.06 42.74 4.17
2207 2316 0.886043 GTGTGCATCAGCTGTGTGGA 60.886 55.000 14.67 12.38 42.74 4.02
2208 2317 0.886043 TGTGCATCAGCTGTGTGGAC 60.886 55.000 26.64 26.64 42.74 4.02
2209 2318 0.604780 GTGCATCAGCTGTGTGGACT 60.605 55.000 26.34 2.16 42.74 3.85
2210 2319 0.109153 TGCATCAGCTGTGTGGACTT 59.891 50.000 14.67 0.00 42.74 3.01
2211 2320 0.520404 GCATCAGCTGTGTGGACTTG 59.480 55.000 14.67 1.65 37.91 3.16
2212 2321 0.520404 CATCAGCTGTGTGGACTTGC 59.480 55.000 14.67 0.00 0.00 4.01
2213 2322 0.399454 ATCAGCTGTGTGGACTTGCT 59.601 50.000 14.67 0.00 34.47 3.91
2214 2323 0.533531 TCAGCTGTGTGGACTTGCTG 60.534 55.000 14.67 6.91 44.41 4.41
2215 2324 1.895707 AGCTGTGTGGACTTGCTGC 60.896 57.895 0.00 0.00 33.46 5.25
2216 2325 1.895707 GCTGTGTGGACTTGCTGCT 60.896 57.895 0.00 0.00 0.00 4.24
2217 2326 1.947013 CTGTGTGGACTTGCTGCTG 59.053 57.895 0.00 0.00 0.00 4.41
2218 2327 1.512996 CTGTGTGGACTTGCTGCTGG 61.513 60.000 0.00 0.00 0.00 4.85
2219 2328 1.526917 GTGTGGACTTGCTGCTGGT 60.527 57.895 0.00 0.00 0.00 4.00
2220 2329 1.103398 GTGTGGACTTGCTGCTGGTT 61.103 55.000 0.00 0.00 0.00 3.67
2221 2330 1.102809 TGTGGACTTGCTGCTGGTTG 61.103 55.000 0.00 0.00 0.00 3.77
2222 2331 1.103398 GTGGACTTGCTGCTGGTTGT 61.103 55.000 0.00 0.00 0.00 3.32
2223 2332 1.102809 TGGACTTGCTGCTGGTTGTG 61.103 55.000 0.00 0.00 0.00 3.33
2224 2333 1.103398 GGACTTGCTGCTGGTTGTGT 61.103 55.000 0.00 0.00 0.00 3.72
2225 2334 0.029834 GACTTGCTGCTGGTTGTGTG 59.970 55.000 0.00 0.00 0.00 3.82
2226 2335 0.394216 ACTTGCTGCTGGTTGTGTGA 60.394 50.000 0.00 0.00 0.00 3.58
2227 2336 0.309922 CTTGCTGCTGGTTGTGTGAG 59.690 55.000 0.00 0.00 0.00 3.51
2228 2337 0.394216 TTGCTGCTGGTTGTGTGAGT 60.394 50.000 0.00 0.00 0.00 3.41
2229 2338 1.096967 TGCTGCTGGTTGTGTGAGTG 61.097 55.000 0.00 0.00 0.00 3.51
2230 2339 1.097547 GCTGCTGGTTGTGTGAGTGT 61.098 55.000 0.00 0.00 0.00 3.55
2231 2340 0.659427 CTGCTGGTTGTGTGAGTGTG 59.341 55.000 0.00 0.00 0.00 3.82
2232 2341 0.035534 TGCTGGTTGTGTGAGTGTGT 60.036 50.000 0.00 0.00 0.00 3.72
2233 2342 0.657840 GCTGGTTGTGTGAGTGTGTC 59.342 55.000 0.00 0.00 0.00 3.67
2234 2343 1.743772 GCTGGTTGTGTGAGTGTGTCT 60.744 52.381 0.00 0.00 0.00 3.41
2235 2344 1.935873 CTGGTTGTGTGAGTGTGTCTG 59.064 52.381 0.00 0.00 0.00 3.51
2236 2345 1.277842 TGGTTGTGTGAGTGTGTCTGT 59.722 47.619 0.00 0.00 0.00 3.41
2237 2346 2.290008 TGGTTGTGTGAGTGTGTCTGTT 60.290 45.455 0.00 0.00 0.00 3.16
2238 2347 3.055747 TGGTTGTGTGAGTGTGTCTGTTA 60.056 43.478 0.00 0.00 0.00 2.41
2239 2348 4.127171 GGTTGTGTGAGTGTGTCTGTTAT 58.873 43.478 0.00 0.00 0.00 1.89
2240 2349 4.024893 GGTTGTGTGAGTGTGTCTGTTATG 60.025 45.833 0.00 0.00 0.00 1.90
2241 2350 3.727726 TGTGTGAGTGTGTCTGTTATGG 58.272 45.455 0.00 0.00 0.00 2.74
2242 2351 3.133901 TGTGTGAGTGTGTCTGTTATGGT 59.866 43.478 0.00 0.00 0.00 3.55
2243 2352 4.127171 GTGTGAGTGTGTCTGTTATGGTT 58.873 43.478 0.00 0.00 0.00 3.67
2244 2353 5.163395 TGTGTGAGTGTGTCTGTTATGGTTA 60.163 40.000 0.00 0.00 0.00 2.85
2245 2354 5.756347 GTGTGAGTGTGTCTGTTATGGTTAA 59.244 40.000 0.00 0.00 0.00 2.01
2246 2355 6.259167 GTGTGAGTGTGTCTGTTATGGTTAAA 59.741 38.462 0.00 0.00 0.00 1.52
2247 2356 6.824196 TGTGAGTGTGTCTGTTATGGTTAAAA 59.176 34.615 0.00 0.00 0.00 1.52
2248 2357 7.337184 TGTGAGTGTGTCTGTTATGGTTAAAAA 59.663 33.333 0.00 0.00 0.00 1.94
2275 2384 9.691362 AACAGCTTGTAATAATACCAAACAAAG 57.309 29.630 0.00 0.00 30.30 2.77
2276 2385 8.303876 ACAGCTTGTAATAATACCAAACAAAGG 58.696 33.333 0.00 0.00 30.30 3.11
2277 2386 7.759433 CAGCTTGTAATAATACCAAACAAAGGG 59.241 37.037 0.00 0.00 30.30 3.95
2278 2387 6.533723 GCTTGTAATAATACCAAACAAAGGGC 59.466 38.462 0.00 0.00 30.30 5.19
2279 2388 7.578763 GCTTGTAATAATACCAAACAAAGGGCT 60.579 37.037 0.00 0.00 30.30 5.19
2280 2389 7.784470 TGTAATAATACCAAACAAAGGGCTT 57.216 32.000 0.00 0.00 0.00 4.35
2281 2390 8.196378 TGTAATAATACCAAACAAAGGGCTTT 57.804 30.769 0.00 0.00 0.00 3.51
2282 2391 8.308207 TGTAATAATACCAAACAAAGGGCTTTC 58.692 33.333 0.00 0.00 0.00 2.62
2283 2392 6.926630 ATAATACCAAACAAAGGGCTTTCA 57.073 33.333 0.00 0.00 0.00 2.69
2284 2393 5.622346 AATACCAAACAAAGGGCTTTCAA 57.378 34.783 0.00 0.00 0.00 2.69
2285 2394 5.823861 ATACCAAACAAAGGGCTTTCAAT 57.176 34.783 0.00 0.00 0.00 2.57
2286 2395 4.071961 ACCAAACAAAGGGCTTTCAATC 57.928 40.909 0.00 0.00 0.00 2.67
2287 2396 3.711190 ACCAAACAAAGGGCTTTCAATCT 59.289 39.130 0.00 0.00 0.00 2.40
2288 2397 4.164030 ACCAAACAAAGGGCTTTCAATCTT 59.836 37.500 0.00 0.00 0.00 2.40
2289 2398 5.125356 CCAAACAAAGGGCTTTCAATCTTT 58.875 37.500 0.00 0.00 0.00 2.52
2290 2399 5.589855 CCAAACAAAGGGCTTTCAATCTTTT 59.410 36.000 0.00 0.00 0.00 2.27
2291 2400 6.095300 CCAAACAAAGGGCTTTCAATCTTTTT 59.905 34.615 0.00 0.00 0.00 1.94
2292 2401 6.682423 AACAAAGGGCTTTCAATCTTTTTG 57.318 33.333 0.00 0.00 0.00 2.44
2293 2402 5.988287 ACAAAGGGCTTTCAATCTTTTTGA 58.012 33.333 0.00 0.00 0.00 2.69
2294 2403 6.413892 ACAAAGGGCTTTCAATCTTTTTGAA 58.586 32.000 0.00 0.00 36.71 2.69
2295 2404 6.539826 ACAAAGGGCTTTCAATCTTTTTGAAG 59.460 34.615 1.56 0.00 39.30 3.02
2296 2405 5.876651 AGGGCTTTCAATCTTTTTGAAGT 57.123 34.783 1.56 0.00 39.30 3.01
2297 2406 5.604565 AGGGCTTTCAATCTTTTTGAAGTG 58.395 37.500 1.56 1.50 39.30 3.16
2298 2407 4.212004 GGGCTTTCAATCTTTTTGAAGTGC 59.788 41.667 14.23 14.23 39.30 4.40
2299 2408 4.810491 GGCTTTCAATCTTTTTGAAGTGCA 59.190 37.500 19.55 0.00 39.30 4.57
2300 2409 5.467735 GGCTTTCAATCTTTTTGAAGTGCAT 59.532 36.000 19.55 0.00 39.30 3.96
2301 2410 6.017687 GGCTTTCAATCTTTTTGAAGTGCATT 60.018 34.615 19.55 0.00 39.30 3.56
2302 2411 6.849305 GCTTTCAATCTTTTTGAAGTGCATTG 59.151 34.615 16.12 0.00 39.30 2.82
2303 2412 7.254522 GCTTTCAATCTTTTTGAAGTGCATTGA 60.255 33.333 16.12 0.00 39.30 2.57
2304 2413 8.665643 TTTCAATCTTTTTGAAGTGCATTGAT 57.334 26.923 0.00 0.00 39.30 2.57
2305 2414 7.646446 TCAATCTTTTTGAAGTGCATTGATG 57.354 32.000 0.00 0.00 0.00 3.07
2306 2415 7.435305 TCAATCTTTTTGAAGTGCATTGATGA 58.565 30.769 0.00 0.00 0.00 2.92
2307 2416 7.927092 TCAATCTTTTTGAAGTGCATTGATGAA 59.073 29.630 0.00 0.00 0.00 2.57
2308 2417 8.717821 CAATCTTTTTGAAGTGCATTGATGAAT 58.282 29.630 0.00 0.00 0.00 2.57
2309 2418 8.842358 ATCTTTTTGAAGTGCATTGATGAATT 57.158 26.923 0.00 0.00 0.00 2.17
2310 2419 8.078959 TCTTTTTGAAGTGCATTGATGAATTG 57.921 30.769 0.00 0.00 0.00 2.32
2311 2420 5.849357 TTTGAAGTGCATTGATGAATTGC 57.151 34.783 0.00 0.00 0.00 3.56
2312 2421 3.503891 TGAAGTGCATTGATGAATTGCG 58.496 40.909 0.00 0.00 0.00 4.85
2313 2422 3.190953 TGAAGTGCATTGATGAATTGCGA 59.809 39.130 0.00 0.00 0.00 5.10
2314 2423 4.142337 TGAAGTGCATTGATGAATTGCGAT 60.142 37.500 0.00 0.00 0.00 4.58
2315 2424 5.066246 TGAAGTGCATTGATGAATTGCGATA 59.934 36.000 0.00 0.00 0.00 2.92
2316 2425 5.700722 AGTGCATTGATGAATTGCGATAT 57.299 34.783 0.00 0.00 0.00 1.63
2317 2426 6.080648 AGTGCATTGATGAATTGCGATATT 57.919 33.333 0.00 0.00 0.00 1.28
2318 2427 6.147581 AGTGCATTGATGAATTGCGATATTC 58.852 36.000 0.00 0.00 35.54 1.75
2319 2428 6.016527 AGTGCATTGATGAATTGCGATATTCT 60.017 34.615 10.15 0.00 35.89 2.40
2320 2429 6.304922 GTGCATTGATGAATTGCGATATTCTC 59.695 38.462 10.15 6.84 35.89 2.87
2321 2430 6.016943 TGCATTGATGAATTGCGATATTCTCA 60.017 34.615 10.15 8.60 35.89 3.27
2322 2431 6.523546 GCATTGATGAATTGCGATATTCTCAG 59.476 38.462 10.15 4.38 35.89 3.35
2323 2432 7.582352 CATTGATGAATTGCGATATTCTCAGT 58.418 34.615 10.15 6.56 35.89 3.41
2324 2433 6.535274 TGATGAATTGCGATATTCTCAGTG 57.465 37.500 10.15 0.00 35.89 3.66
2325 2434 6.051074 TGATGAATTGCGATATTCTCAGTGT 58.949 36.000 10.15 0.00 35.89 3.55
2326 2435 6.539826 TGATGAATTGCGATATTCTCAGTGTT 59.460 34.615 10.15 0.00 35.89 3.32
2327 2436 6.741992 TGAATTGCGATATTCTCAGTGTTT 57.258 33.333 10.15 0.00 35.89 2.83
2328 2437 6.775088 TGAATTGCGATATTCTCAGTGTTTC 58.225 36.000 10.15 0.00 35.89 2.78
2329 2438 6.595326 TGAATTGCGATATTCTCAGTGTTTCT 59.405 34.615 10.15 0.00 35.89 2.52
2330 2439 7.763985 TGAATTGCGATATTCTCAGTGTTTCTA 59.236 33.333 10.15 0.00 35.89 2.10
2331 2440 7.706281 ATTGCGATATTCTCAGTGTTTCTAG 57.294 36.000 0.00 0.00 0.00 2.43
2332 2441 6.208988 TGCGATATTCTCAGTGTTTCTAGT 57.791 37.500 0.00 0.00 0.00 2.57
2333 2442 6.631016 TGCGATATTCTCAGTGTTTCTAGTT 58.369 36.000 0.00 0.00 0.00 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
50 51 6.880484 TCTTCATTGCTCCAAATTATTGCAT 58.120 32.000 0.00 0.00 35.10 3.96
75 79 5.710099 ACATAACAAATCCAATCTGAACCGT 59.290 36.000 0.00 0.00 0.00 4.83
76 80 6.194796 ACATAACAAATCCAATCTGAACCG 57.805 37.500 0.00 0.00 0.00 4.44
84 88 7.307160 CGCGTGTCTATACATAACAAATCCAAT 60.307 37.037 0.00 0.00 38.08 3.16
99 103 1.385528 TTCCAGCTCGCGTGTCTATA 58.614 50.000 5.77 0.00 0.00 1.31
119 123 1.277842 TGCATGGACGAGGAAAGCTAA 59.722 47.619 0.00 0.00 0.00 3.09
132 136 2.583024 TGTTCCTGTCAATGCATGGA 57.417 45.000 0.00 0.00 0.00 3.41
165 169 1.228245 AACAACGGCATGCACCTCT 60.228 52.632 21.36 0.00 0.00 3.69
178 182 0.675633 AGCCTTGCATCCACAACAAC 59.324 50.000 0.00 0.00 0.00 3.32
226 230 8.902540 ACATCCTTAGTTGCGAAATAATGATA 57.097 30.769 0.00 0.00 29.49 2.15
235 239 8.780846 TTAAGATAAACATCCTTAGTTGCGAA 57.219 30.769 0.00 0.00 0.00 4.70
236 240 8.958119 ATTAAGATAAACATCCTTAGTTGCGA 57.042 30.769 0.00 0.00 0.00 5.10
302 309 5.723672 ATTCTTCTCGTAGGTCACTTCAA 57.276 39.130 0.00 0.00 0.00 2.69
313 320 6.873997 TGCCAATCTTCTTATTCTTCTCGTA 58.126 36.000 0.00 0.00 0.00 3.43
314 321 5.734720 TGCCAATCTTCTTATTCTTCTCGT 58.265 37.500 0.00 0.00 0.00 4.18
315 322 6.259608 ACATGCCAATCTTCTTATTCTTCTCG 59.740 38.462 0.00 0.00 0.00 4.04
318 325 8.295288 CCATACATGCCAATCTTCTTATTCTTC 58.705 37.037 0.00 0.00 0.00 2.87
322 329 7.062322 TCACCATACATGCCAATCTTCTTATT 58.938 34.615 0.00 0.00 0.00 1.40
324 331 6.000246 TCACCATACATGCCAATCTTCTTA 58.000 37.500 0.00 0.00 0.00 2.10
345 352 1.003003 TGCAATGGGTCGACTTGATCA 59.997 47.619 16.46 6.99 0.00 2.92
355 362 0.961019 TGAACAAGCTGCAATGGGTC 59.039 50.000 1.02 3.83 0.00 4.46
356 363 1.342174 CTTGAACAAGCTGCAATGGGT 59.658 47.619 1.02 0.00 0.00 4.51
419 426 2.305009 GCTTAGGAAAGGCATGCATCT 58.695 47.619 21.36 8.70 32.98 2.90
462 469 5.367644 TCTCCCTTCAGCAATCTTGATATGA 59.632 40.000 0.00 0.00 0.00 2.15
469 476 3.009916 ACATGTCTCCCTTCAGCAATCTT 59.990 43.478 0.00 0.00 0.00 2.40
486 494 1.494721 ACCCCACTGTCAAAGACATGT 59.505 47.619 0.00 0.00 41.94 3.21
504 512 2.787473 TTGTCATCACATCTCCCACC 57.213 50.000 0.00 0.00 30.55 4.61
505 513 3.614092 ACATTGTCATCACATCTCCCAC 58.386 45.455 0.00 0.00 30.55 4.61
538 546 1.001860 TGAGACATCGTGGACATGCAA 59.998 47.619 0.00 0.00 0.00 4.08
585 596 0.394565 ACTGTCTGAGCAACCTCCAC 59.605 55.000 0.00 0.00 37.29 4.02
632 643 3.181459 TGTTTCCGAGGTGAAGACATCAA 60.181 43.478 0.00 0.00 40.50 2.57
636 647 2.549992 CCATGTTTCCGAGGTGAAGACA 60.550 50.000 0.00 0.00 0.00 3.41
643 654 2.879103 AATGTCCATGTTTCCGAGGT 57.121 45.000 0.00 0.00 0.00 3.85
657 668 5.331876 AGGTCTACAGCTCACTAAATGTC 57.668 43.478 0.00 0.00 0.00 3.06
666 677 1.561643 CCCAGAAGGTCTACAGCTCA 58.438 55.000 0.00 0.00 0.00 4.26
673 684 2.579878 CTGACGCCCAGAAGGTCTA 58.420 57.895 0.00 0.00 45.78 2.59
707 718 4.202284 GGTAACCTTTACGGCATATCCAGA 60.202 45.833 0.00 0.00 35.61 3.86
718 729 3.255725 TCATTCTGCGGTAACCTTTACG 58.744 45.455 0.00 0.00 0.00 3.18
792 812 1.089920 CAGGGAGCACGAATTTGAGG 58.910 55.000 0.00 0.00 0.00 3.86
796 816 1.238439 CACACAGGGAGCACGAATTT 58.762 50.000 0.00 0.00 0.00 1.82
843 863 1.671979 CGCAATGGATGATGTGGAGT 58.328 50.000 0.00 0.00 0.00 3.85
858 878 2.894257 ATGCCTCAGGTGTCCGCAA 61.894 57.895 0.00 0.00 32.35 4.85
865 885 1.935873 CACGAATACATGCCTCAGGTG 59.064 52.381 0.00 0.00 29.18 4.00
1035 1058 4.256180 CGTAGGCCCCAGCATCCC 62.256 72.222 0.00 0.00 42.56 3.85
1055 1078 4.579384 CACCCACCACCGGCAGTT 62.579 66.667 0.00 0.00 0.00 3.16
1076 1099 1.674221 GCTTCTTCATGTCTCCGCTGT 60.674 52.381 0.00 0.00 0.00 4.40
1100 1123 2.344025 TGTCTTTCTCGATCTCGACGA 58.656 47.619 0.00 0.00 44.22 4.20
1209 1232 1.383963 ACCTGAGGACAGAGACCCTA 58.616 55.000 4.99 0.00 46.03 3.53
1423 1497 0.390124 AACCAAACACATGCAGCAGG 59.610 50.000 5.26 5.26 0.00 4.85
1490 1578 3.555956 CGACCAACACTAGCCATGATTAC 59.444 47.826 0.00 0.00 0.00 1.89
1500 1588 1.395954 TCGATCGACGACCAACACTAG 59.604 52.381 15.15 0.00 46.45 2.57
1501 1589 1.441738 TCGATCGACGACCAACACTA 58.558 50.000 15.15 0.00 46.45 2.74
1502 1590 2.250646 TCGATCGACGACCAACACT 58.749 52.632 15.15 0.00 46.45 3.55
1525 1627 5.234752 ACATATACACGTTTGCAGTGAGAA 58.765 37.500 11.19 0.00 41.83 2.87
1543 1648 2.621338 CTCGCACCTGACACAACATAT 58.379 47.619 0.00 0.00 0.00 1.78
1545 1650 1.230635 GCTCGCACCTGACACAACAT 61.231 55.000 0.00 0.00 0.00 2.71
1579 1684 6.558771 ATTTGAAAGCCACAAATTAAAGGC 57.441 33.333 6.81 6.81 42.73 4.35
1614 1719 1.891150 CAAGCAGGCAAGAACAATCCT 59.109 47.619 0.00 0.00 0.00 3.24
1615 1720 1.670967 GCAAGCAGGCAAGAACAATCC 60.671 52.381 0.00 0.00 0.00 3.01
1685 1794 1.348036 GGGTGCACTAGATACATCCCC 59.652 57.143 17.98 0.17 0.00 4.81
1686 1795 1.000955 CGGGTGCACTAGATACATCCC 59.999 57.143 17.98 4.08 30.33 3.85
1687 1796 1.687123 ACGGGTGCACTAGATACATCC 59.313 52.381 17.98 4.83 0.00 3.51
1688 1797 2.743938 CACGGGTGCACTAGATACATC 58.256 52.381 17.98 0.00 0.00 3.06
1689 1798 2.890808 CACGGGTGCACTAGATACAT 57.109 50.000 17.98 0.00 0.00 2.29
1709 1818 1.240641 TGCACCGGTAGCACCAATTG 61.241 55.000 22.47 0.00 38.47 2.32
1710 1819 0.323360 ATGCACCGGTAGCACCAATT 60.323 50.000 26.70 12.96 45.95 2.32
1711 1820 0.748005 GATGCACCGGTAGCACCAAT 60.748 55.000 26.70 15.29 45.95 3.16
1712 1821 1.376683 GATGCACCGGTAGCACCAA 60.377 57.895 26.70 10.43 45.95 3.67
1713 1822 2.267642 GATGCACCGGTAGCACCA 59.732 61.111 26.70 12.22 45.95 4.17
1714 1823 2.890474 CGATGCACCGGTAGCACC 60.890 66.667 26.70 19.66 45.95 5.01
1715 1824 2.890474 CCGATGCACCGGTAGCAC 60.890 66.667 26.70 20.02 45.95 4.40
1735 1844 2.252976 TTTTTGAACCTGCAATGGGC 57.747 45.000 0.00 0.00 45.13 5.36
1736 1845 6.171921 TGAATATTTTTGAACCTGCAATGGG 58.828 36.000 0.00 0.00 0.00 4.00
1737 1846 7.670009 TTGAATATTTTTGAACCTGCAATGG 57.330 32.000 0.00 0.00 0.00 3.16
1738 1847 9.947669 TTTTTGAATATTTTTGAACCTGCAATG 57.052 25.926 0.00 0.00 0.00 2.82
1775 1884 7.208777 TGATGTTGTGTCAATGCACTATTTTT 58.791 30.769 0.00 0.00 39.89 1.94
1776 1885 6.747125 TGATGTTGTGTCAATGCACTATTTT 58.253 32.000 0.00 0.00 39.89 1.82
1777 1886 6.330004 TGATGTTGTGTCAATGCACTATTT 57.670 33.333 0.00 0.00 39.89 1.40
1778 1887 5.963176 TGATGTTGTGTCAATGCACTATT 57.037 34.783 0.00 0.00 39.89 1.73
1779 1888 5.963176 TTGATGTTGTGTCAATGCACTAT 57.037 34.783 0.00 2.67 39.89 2.12
1780 1889 5.963176 ATTGATGTTGTGTCAATGCACTA 57.037 34.783 0.00 0.20 42.87 2.74
1781 1890 4.859304 ATTGATGTTGTGTCAATGCACT 57.141 36.364 0.00 0.00 42.87 4.40
1786 1895 5.940192 ACGTACATTGATGTTGTGTCAAT 57.060 34.783 1.46 0.00 44.74 2.57
1787 1896 5.506181 CAACGTACATTGATGTTGTGTCAA 58.494 37.500 0.00 0.00 40.15 3.18
1788 1897 5.089396 CAACGTACATTGATGTTGTGTCA 57.911 39.130 0.00 0.00 40.15 3.58
1794 1903 5.743026 TTGTGACAACGTACATTGATGTT 57.257 34.783 8.94 0.00 41.97 2.71
1795 1904 5.743026 TTTGTGACAACGTACATTGATGT 57.257 34.783 8.94 1.84 44.48 3.06
1796 1905 7.621832 ATTTTTGTGACAACGTACATTGATG 57.378 32.000 8.94 0.00 33.57 3.07
1797 1906 8.641499 AAATTTTTGTGACAACGTACATTGAT 57.359 26.923 8.94 0.00 33.57 2.57
1798 1907 7.755373 TGAAATTTTTGTGACAACGTACATTGA 59.245 29.630 8.94 0.00 33.57 2.57
1799 1908 7.889745 TGAAATTTTTGTGACAACGTACATTG 58.110 30.769 0.00 0.00 35.59 2.82
1800 1909 8.467402 TTGAAATTTTTGTGACAACGTACATT 57.533 26.923 0.00 0.00 0.00 2.71
1801 1910 8.641499 ATTGAAATTTTTGTGACAACGTACAT 57.359 26.923 0.00 0.00 0.00 2.29
1802 1911 7.755373 TGATTGAAATTTTTGTGACAACGTACA 59.245 29.630 0.00 0.00 0.00 2.90
1803 1912 8.109843 TGATTGAAATTTTTGTGACAACGTAC 57.890 30.769 0.00 0.00 0.00 3.67
1804 1913 8.689251 TTGATTGAAATTTTTGTGACAACGTA 57.311 26.923 0.00 0.00 0.00 3.57
1805 1914 7.588143 TTGATTGAAATTTTTGTGACAACGT 57.412 28.000 0.00 0.00 0.00 3.99
1806 1915 8.871742 TTTTGATTGAAATTTTTGTGACAACG 57.128 26.923 0.00 0.00 0.00 4.10
1809 1918 9.699985 CGAATTTTGATTGAAATTTTTGTGACA 57.300 25.926 0.00 0.00 38.85 3.58
1810 1919 9.913451 TCGAATTTTGATTGAAATTTTTGTGAC 57.087 25.926 0.00 0.00 38.85 3.67
1821 1930 9.526713 TGAGAAATGTTTCGAATTTTGATTGAA 57.473 25.926 0.00 0.00 41.92 2.69
1822 1931 9.526713 TTGAGAAATGTTTCGAATTTTGATTGA 57.473 25.926 0.00 0.00 41.92 2.57
1823 1932 9.787626 CTTGAGAAATGTTTCGAATTTTGATTG 57.212 29.630 0.00 0.00 41.92 2.67
1824 1933 9.748708 TCTTGAGAAATGTTTCGAATTTTGATT 57.251 25.926 0.00 0.00 41.92 2.57
1825 1934 9.918630 ATCTTGAGAAATGTTTCGAATTTTGAT 57.081 25.926 0.00 0.00 41.92 2.57
1865 1974 9.719355 TGTGTTATGTACTATTCAGTGTCAAAT 57.281 29.630 0.00 0.00 36.14 2.32
1866 1975 9.549078 TTGTGTTATGTACTATTCAGTGTCAAA 57.451 29.630 0.00 0.00 36.14 2.69
1867 1976 9.203421 CTTGTGTTATGTACTATTCAGTGTCAA 57.797 33.333 0.00 0.00 36.14 3.18
1868 1977 8.364894 ACTTGTGTTATGTACTATTCAGTGTCA 58.635 33.333 0.00 0.00 36.14 3.58
1869 1978 8.758633 ACTTGTGTTATGTACTATTCAGTGTC 57.241 34.615 0.00 0.00 36.14 3.67
1870 1979 8.988934 CAACTTGTGTTATGTACTATTCAGTGT 58.011 33.333 0.00 0.00 34.00 3.55
1871 1980 8.443160 CCAACTTGTGTTATGTACTATTCAGTG 58.557 37.037 0.00 0.00 34.00 3.66
1872 1981 7.606456 CCCAACTTGTGTTATGTACTATTCAGT 59.394 37.037 0.00 0.00 35.38 3.41
1873 1982 7.414098 GCCCAACTTGTGTTATGTACTATTCAG 60.414 40.741 0.00 0.00 34.60 3.02
1874 1983 6.373216 GCCCAACTTGTGTTATGTACTATTCA 59.627 38.462 0.00 0.00 34.60 2.57
1875 1984 6.598064 AGCCCAACTTGTGTTATGTACTATTC 59.402 38.462 0.00 0.00 34.60 1.75
1876 1985 6.481643 AGCCCAACTTGTGTTATGTACTATT 58.518 36.000 0.00 0.00 34.60 1.73
1877 1986 6.062258 AGCCCAACTTGTGTTATGTACTAT 57.938 37.500 0.00 0.00 34.60 2.12
1878 1987 5.492855 AGCCCAACTTGTGTTATGTACTA 57.507 39.130 0.00 0.00 34.60 1.82
1879 1988 4.367039 AGCCCAACTTGTGTTATGTACT 57.633 40.909 0.00 0.00 34.60 2.73
1880 1989 4.517453 TGAAGCCCAACTTGTGTTATGTAC 59.483 41.667 0.00 0.00 39.29 2.90
1881 1990 4.720046 TGAAGCCCAACTTGTGTTATGTA 58.280 39.130 0.00 0.00 39.29 2.29
1882 1991 3.561143 TGAAGCCCAACTTGTGTTATGT 58.439 40.909 0.00 0.00 39.29 2.29
1883 1992 3.569701 ACTGAAGCCCAACTTGTGTTATG 59.430 43.478 0.00 0.00 39.29 1.90
1884 1993 3.832527 ACTGAAGCCCAACTTGTGTTAT 58.167 40.909 0.00 0.00 39.29 1.89
1885 1994 3.290948 ACTGAAGCCCAACTTGTGTTA 57.709 42.857 0.00 0.00 39.29 2.41
1886 1995 2.143876 ACTGAAGCCCAACTTGTGTT 57.856 45.000 0.00 0.00 39.29 3.32
1887 1996 2.143876 AACTGAAGCCCAACTTGTGT 57.856 45.000 0.00 0.00 39.29 3.72
1888 1997 3.189285 CAAAACTGAAGCCCAACTTGTG 58.811 45.455 0.00 0.00 39.29 3.33
1889 1998 2.168313 CCAAAACTGAAGCCCAACTTGT 59.832 45.455 0.00 0.00 39.29 3.16
1890 1999 2.825205 CCAAAACTGAAGCCCAACTTG 58.175 47.619 0.00 0.00 39.29 3.16
1891 2000 1.138859 GCCAAAACTGAAGCCCAACTT 59.861 47.619 0.00 0.00 42.98 2.66
1892 2001 0.752658 GCCAAAACTGAAGCCCAACT 59.247 50.000 0.00 0.00 0.00 3.16
1893 2002 0.249868 GGCCAAAACTGAAGCCCAAC 60.250 55.000 0.00 0.00 39.60 3.77
1894 2003 2.132300 GGCCAAAACTGAAGCCCAA 58.868 52.632 0.00 0.00 39.60 4.12
1895 2004 3.869481 GGCCAAAACTGAAGCCCA 58.131 55.556 0.00 0.00 39.60 5.36
1897 2006 0.686789 AATGGGCCAAAACTGAAGCC 59.313 50.000 11.89 0.00 44.99 4.35
1898 2007 2.825532 TCTAATGGGCCAAAACTGAAGC 59.174 45.455 11.89 0.00 0.00 3.86
1899 2008 5.665916 ATTCTAATGGGCCAAAACTGAAG 57.334 39.130 11.89 0.42 0.00 3.02
1900 2009 7.398618 TCAATATTCTAATGGGCCAAAACTGAA 59.601 33.333 11.89 11.44 0.00 3.02
1901 2010 6.894654 TCAATATTCTAATGGGCCAAAACTGA 59.105 34.615 11.89 1.87 0.00 3.41
1902 2011 6.980397 GTCAATATTCTAATGGGCCAAAACTG 59.020 38.462 11.89 0.00 0.00 3.16
1903 2012 6.183360 CGTCAATATTCTAATGGGCCAAAACT 60.183 38.462 11.89 0.00 0.00 2.66
1904 2013 5.977129 CGTCAATATTCTAATGGGCCAAAAC 59.023 40.000 11.89 0.00 0.00 2.43
1905 2014 5.654650 ACGTCAATATTCTAATGGGCCAAAA 59.345 36.000 11.89 3.14 0.00 2.44
1906 2015 5.197451 ACGTCAATATTCTAATGGGCCAAA 58.803 37.500 11.89 0.00 0.00 3.28
1907 2016 4.787551 ACGTCAATATTCTAATGGGCCAA 58.212 39.130 11.89 0.00 0.00 4.52
1908 2017 4.141597 TGACGTCAATATTCTAATGGGCCA 60.142 41.667 17.62 9.61 0.00 5.36
1909 2018 4.385825 TGACGTCAATATTCTAATGGGCC 58.614 43.478 17.62 0.00 0.00 5.80
1910 2019 6.371809 TTTGACGTCAATATTCTAATGGGC 57.628 37.500 30.10 0.00 35.55 5.36
1924 2033 9.820229 GATACAAAAATGACTAATTTGACGTCA 57.180 29.630 15.76 15.76 38.52 4.35
1934 2043 9.844790 CAATGCTCAAGATACAAAAATGACTAA 57.155 29.630 0.00 0.00 0.00 2.24
1935 2044 9.013229 ACAATGCTCAAGATACAAAAATGACTA 57.987 29.630 0.00 0.00 0.00 2.59
1936 2045 7.889469 ACAATGCTCAAGATACAAAAATGACT 58.111 30.769 0.00 0.00 0.00 3.41
1937 2046 8.524870 AACAATGCTCAAGATACAAAAATGAC 57.475 30.769 0.00 0.00 0.00 3.06
1938 2047 9.545105 AAAACAATGCTCAAGATACAAAAATGA 57.455 25.926 0.00 0.00 0.00 2.57
1939 2048 9.588774 CAAAACAATGCTCAAGATACAAAAATG 57.411 29.630 0.00 0.00 0.00 2.32
1940 2049 9.545105 TCAAAACAATGCTCAAGATACAAAAAT 57.455 25.926 0.00 0.00 0.00 1.82
1941 2050 8.939201 TCAAAACAATGCTCAAGATACAAAAA 57.061 26.923 0.00 0.00 0.00 1.94
1942 2051 8.939201 TTCAAAACAATGCTCAAGATACAAAA 57.061 26.923 0.00 0.00 0.00 2.44
1943 2052 9.545105 AATTCAAAACAATGCTCAAGATACAAA 57.455 25.926 0.00 0.00 0.00 2.83
1944 2053 9.545105 AAATTCAAAACAATGCTCAAGATACAA 57.455 25.926 0.00 0.00 0.00 2.41
1945 2054 9.545105 AAAATTCAAAACAATGCTCAAGATACA 57.455 25.926 0.00 0.00 0.00 2.29
1946 2055 9.801714 CAAAATTCAAAACAATGCTCAAGATAC 57.198 29.630 0.00 0.00 0.00 2.24
1947 2056 9.761504 TCAAAATTCAAAACAATGCTCAAGATA 57.238 25.926 0.00 0.00 0.00 1.98
1948 2057 8.665643 TCAAAATTCAAAACAATGCTCAAGAT 57.334 26.923 0.00 0.00 0.00 2.40
1949 2058 8.665643 ATCAAAATTCAAAACAATGCTCAAGA 57.334 26.923 0.00 0.00 0.00 3.02
1950 2059 9.724839 AAATCAAAATTCAAAACAATGCTCAAG 57.275 25.926 0.00 0.00 0.00 3.02
1951 2060 9.504710 CAAATCAAAATTCAAAACAATGCTCAA 57.495 25.926 0.00 0.00 0.00 3.02
1952 2061 8.890718 TCAAATCAAAATTCAAAACAATGCTCA 58.109 25.926 0.00 0.00 0.00 4.26
1953 2062 9.719279 TTCAAATCAAAATTCAAAACAATGCTC 57.281 25.926 0.00 0.00 0.00 4.26
1971 2080 9.591792 TGTATGTTGTCACAAAAATTCAAATCA 57.408 25.926 0.00 0.00 36.16 2.57
1975 2084 9.591792 TCAATGTATGTTGTCACAAAAATTCAA 57.408 25.926 0.00 0.00 36.16 2.69
1976 2085 9.761504 ATCAATGTATGTTGTCACAAAAATTCA 57.238 25.926 0.00 0.00 36.16 2.57
1978 2087 9.545105 ACATCAATGTATGTTGTCACAAAAATT 57.455 25.926 0.00 0.00 37.39 1.82
1979 2088 9.545105 AACATCAATGTATGTTGTCACAAAAAT 57.455 25.926 0.00 0.00 45.90 1.82
1980 2089 8.939201 AACATCAATGTATGTTGTCACAAAAA 57.061 26.923 0.00 0.00 45.90 1.94
1991 2100 5.447683 GCATCGACACAACATCAATGTATGT 60.448 40.000 10.94 10.94 40.80 2.29
1992 2101 4.965762 GCATCGACACAACATCAATGTATG 59.034 41.667 0.00 1.54 40.80 2.39
1993 2102 4.635324 TGCATCGACACAACATCAATGTAT 59.365 37.500 0.00 0.00 40.80 2.29
1994 2103 3.999663 TGCATCGACACAACATCAATGTA 59.000 39.130 0.00 0.00 40.80 2.29
1995 2104 2.813172 TGCATCGACACAACATCAATGT 59.187 40.909 0.00 0.00 44.20 2.71
1996 2105 3.474693 TGCATCGACACAACATCAATG 57.525 42.857 0.00 0.00 0.00 2.82
1997 2106 4.707030 AATGCATCGACACAACATCAAT 57.293 36.364 0.00 0.00 0.00 2.57
1998 2107 5.619625 TTAATGCATCGACACAACATCAA 57.380 34.783 0.00 0.00 0.00 2.57
1999 2108 5.816449 ATTAATGCATCGACACAACATCA 57.184 34.783 0.00 0.00 0.00 3.07
2000 2109 8.786937 AAATATTAATGCATCGACACAACATC 57.213 30.769 0.00 0.00 0.00 3.06
2001 2110 9.585099 AAAAATATTAATGCATCGACACAACAT 57.415 25.926 0.00 0.00 0.00 2.71
2002 2111 8.978564 AAAAATATTAATGCATCGACACAACA 57.021 26.923 0.00 0.00 0.00 3.33
2043 2152 4.073549 ACCCCATTGCACATTCAAAAATG 58.926 39.130 0.00 0.00 46.42 2.32
2044 2153 4.325972 GACCCCATTGCACATTCAAAAAT 58.674 39.130 0.00 0.00 0.00 1.82
2045 2154 3.495806 GGACCCCATTGCACATTCAAAAA 60.496 43.478 0.00 0.00 0.00 1.94
2046 2155 2.038295 GGACCCCATTGCACATTCAAAA 59.962 45.455 0.00 0.00 0.00 2.44
2047 2156 1.622811 GGACCCCATTGCACATTCAAA 59.377 47.619 0.00 0.00 0.00 2.69
2048 2157 1.265236 GGACCCCATTGCACATTCAA 58.735 50.000 0.00 0.00 0.00 2.69
2049 2158 0.964860 CGGACCCCATTGCACATTCA 60.965 55.000 0.00 0.00 0.00 2.57
2050 2159 1.666209 CCGGACCCCATTGCACATTC 61.666 60.000 0.00 0.00 0.00 2.67
2051 2160 1.682005 CCGGACCCCATTGCACATT 60.682 57.895 0.00 0.00 0.00 2.71
2052 2161 2.044053 CCGGACCCCATTGCACAT 60.044 61.111 0.00 0.00 0.00 3.21
2070 2179 0.741574 TAATTGGTGCTACCGGTGCG 60.742 55.000 19.93 9.54 42.58 5.34
2071 2180 1.400494 CTTAATTGGTGCTACCGGTGC 59.600 52.381 19.93 19.04 42.58 5.01
2072 2181 1.400494 GCTTAATTGGTGCTACCGGTG 59.600 52.381 19.93 8.61 42.58 4.94
2073 2182 1.680860 GGCTTAATTGGTGCTACCGGT 60.681 52.381 13.98 13.98 42.58 5.28
2074 2183 1.021968 GGCTTAATTGGTGCTACCGG 58.978 55.000 0.00 0.00 42.58 5.28
2075 2184 0.655733 CGGCTTAATTGGTGCTACCG 59.344 55.000 0.00 0.00 42.58 4.02
2076 2185 1.021968 CCGGCTTAATTGGTGCTACC 58.978 55.000 0.00 0.00 39.22 3.18
2077 2186 1.400494 CACCGGCTTAATTGGTGCTAC 59.600 52.381 0.00 0.00 45.85 3.58
2078 2187 1.745232 CACCGGCTTAATTGGTGCTA 58.255 50.000 0.00 0.00 45.85 3.49
2079 2188 2.566824 CACCGGCTTAATTGGTGCT 58.433 52.632 0.00 0.00 45.85 4.40
2082 2191 1.248101 GGTGCACCGGCTTAATTGGT 61.248 55.000 22.49 0.00 41.91 3.67
2083 2192 1.247419 TGGTGCACCGGCTTAATTGG 61.247 55.000 30.07 0.00 41.91 3.16
2084 2193 0.171007 CTGGTGCACCGGCTTAATTG 59.829 55.000 31.17 8.27 41.91 2.32
2085 2194 0.037590 TCTGGTGCACCGGCTTAATT 59.962 50.000 35.80 0.00 42.21 1.40
2086 2195 0.255890 ATCTGGTGCACCGGCTTAAT 59.744 50.000 35.80 22.76 42.21 1.40
2087 2196 0.906066 TATCTGGTGCACCGGCTTAA 59.094 50.000 35.80 21.55 42.21 1.85
2088 2197 0.177141 GTATCTGGTGCACCGGCTTA 59.823 55.000 35.80 26.03 42.21 3.09
2089 2198 1.078426 GTATCTGGTGCACCGGCTT 60.078 57.895 35.80 26.99 42.21 4.35
2090 2199 2.584608 GTATCTGGTGCACCGGCT 59.415 61.111 35.80 29.76 42.21 5.52
2091 2200 2.890474 CGTATCTGGTGCACCGGC 60.890 66.667 35.80 22.48 42.21 6.13
2092 2201 1.809619 CACGTATCTGGTGCACCGG 60.810 63.158 35.06 35.06 43.86 5.28
2093 2202 3.780693 CACGTATCTGGTGCACCG 58.219 61.111 30.07 23.48 39.43 4.94
2098 2207 2.890474 GCGGGCACGTATCTGGTG 60.890 66.667 11.45 0.00 43.45 4.17
2099 2208 4.157120 GGCGGGCACGTATCTGGT 62.157 66.667 11.45 0.00 43.45 4.00
2100 2209 3.792053 GAGGCGGGCACGTATCTGG 62.792 68.421 11.45 0.00 43.45 3.86
2101 2210 2.279517 GAGGCGGGCACGTATCTG 60.280 66.667 11.45 0.00 43.45 2.90
2102 2211 0.754217 TAAGAGGCGGGCACGTATCT 60.754 55.000 11.45 11.22 43.45 1.98
2103 2212 0.318784 CTAAGAGGCGGGCACGTATC 60.319 60.000 11.45 8.71 43.45 2.24
2104 2213 1.041447 ACTAAGAGGCGGGCACGTAT 61.041 55.000 11.45 0.00 43.45 3.06
2105 2214 1.252904 AACTAAGAGGCGGGCACGTA 61.253 55.000 11.45 0.00 43.45 3.57
2106 2215 2.580601 AACTAAGAGGCGGGCACGT 61.581 57.895 11.45 0.00 43.45 4.49
2107 2216 2.100631 CAACTAAGAGGCGGGCACG 61.101 63.158 2.50 2.50 44.63 5.34
2108 2217 1.003718 ACAACTAAGAGGCGGGCAC 60.004 57.895 3.78 0.00 0.00 5.01
2109 2218 1.003839 CACAACTAAGAGGCGGGCA 60.004 57.895 3.78 0.00 0.00 5.36
2110 2219 1.003718 ACACAACTAAGAGGCGGGC 60.004 57.895 0.00 0.00 0.00 6.13
2111 2220 0.034896 ACACACAACTAAGAGGCGGG 59.965 55.000 0.00 0.00 0.00 6.13
2112 2221 1.148310 CACACACAACTAAGAGGCGG 58.852 55.000 0.00 0.00 0.00 6.13
2113 2222 0.512952 GCACACACAACTAAGAGGCG 59.487 55.000 0.00 0.00 0.00 5.52
2114 2223 1.884235 AGCACACACAACTAAGAGGC 58.116 50.000 0.00 0.00 0.00 4.70
2115 2224 3.002656 CACAAGCACACACAACTAAGAGG 59.997 47.826 0.00 0.00 0.00 3.69
2116 2225 3.623060 ACACAAGCACACACAACTAAGAG 59.377 43.478 0.00 0.00 0.00 2.85
2117 2226 3.373748 CACACAAGCACACACAACTAAGA 59.626 43.478 0.00 0.00 0.00 2.10
2118 2227 3.683989 CACACAAGCACACACAACTAAG 58.316 45.455 0.00 0.00 0.00 2.18
2119 2228 2.159448 GCACACAAGCACACACAACTAA 60.159 45.455 0.00 0.00 0.00 2.24
2120 2229 1.400142 GCACACAAGCACACACAACTA 59.600 47.619 0.00 0.00 0.00 2.24
2121 2230 0.171007 GCACACAAGCACACACAACT 59.829 50.000 0.00 0.00 0.00 3.16
2122 2231 0.109365 TGCACACAAGCACACACAAC 60.109 50.000 0.00 0.00 40.11 3.32
2123 2232 2.261215 TGCACACAAGCACACACAA 58.739 47.368 0.00 0.00 40.11 3.33
2124 2233 3.993535 TGCACACAAGCACACACA 58.006 50.000 0.00 0.00 40.11 3.72
2131 2240 3.005554 AGTCATGTAGATGCACACAAGC 58.994 45.455 0.00 0.00 0.00 4.01
2132 2241 3.181513 GCAGTCATGTAGATGCACACAAG 60.182 47.826 0.00 0.00 38.54 3.16
2133 2242 2.743664 GCAGTCATGTAGATGCACACAA 59.256 45.455 0.00 0.00 38.54 3.33
2134 2243 2.349590 GCAGTCATGTAGATGCACACA 58.650 47.619 0.00 0.00 38.54 3.72
2135 2244 1.325640 CGCAGTCATGTAGATGCACAC 59.674 52.381 12.25 0.00 38.60 3.82
2136 2245 1.066929 ACGCAGTCATGTAGATGCACA 60.067 47.619 12.25 0.00 29.74 4.57
2137 2246 1.325640 CACGCAGTCATGTAGATGCAC 59.674 52.381 12.25 0.00 41.61 4.57
2138 2247 1.643880 CACGCAGTCATGTAGATGCA 58.356 50.000 12.25 0.00 41.61 3.96
2139 2248 0.933097 CCACGCAGTCATGTAGATGC 59.067 55.000 0.00 0.00 41.61 3.91
2140 2249 1.929169 CACCACGCAGTCATGTAGATG 59.071 52.381 0.00 0.00 41.61 2.90
2141 2250 1.550524 ACACCACGCAGTCATGTAGAT 59.449 47.619 0.00 0.00 41.61 1.98
2142 2251 0.966179 ACACCACGCAGTCATGTAGA 59.034 50.000 0.00 0.00 41.61 2.59
2143 2252 1.070821 CACACCACGCAGTCATGTAG 58.929 55.000 0.00 0.00 41.61 2.74
2144 2253 0.320334 CCACACCACGCAGTCATGTA 60.320 55.000 0.00 0.00 41.61 2.29
2145 2254 1.597854 CCACACCACGCAGTCATGT 60.598 57.895 0.00 0.00 41.61 3.21
2146 2255 2.969806 GCCACACCACGCAGTCATG 61.970 63.158 0.00 0.00 41.61 3.07
2147 2256 2.669569 GCCACACCACGCAGTCAT 60.670 61.111 0.00 0.00 41.61 3.06
2148 2257 3.399105 AAGCCACACCACGCAGTCA 62.399 57.895 0.00 0.00 41.61 3.41
2149 2258 2.591715 AAGCCACACCACGCAGTC 60.592 61.111 0.00 0.00 41.61 3.51
2151 2260 2.591429 TCAAGCCACACCACGCAG 60.591 61.111 0.00 0.00 0.00 5.18
2152 2261 2.591429 CTCAAGCCACACCACGCA 60.591 61.111 0.00 0.00 0.00 5.24
2153 2262 2.280797 TCTCAAGCCACACCACGC 60.281 61.111 0.00 0.00 0.00 5.34
2154 2263 1.069765 ACTCTCAAGCCACACCACG 59.930 57.895 0.00 0.00 0.00 4.94
2155 2264 0.179045 ACACTCTCAAGCCACACCAC 60.179 55.000 0.00 0.00 0.00 4.16
2156 2265 0.179048 CACACTCTCAAGCCACACCA 60.179 55.000 0.00 0.00 0.00 4.17
2157 2266 1.510480 GCACACTCTCAAGCCACACC 61.510 60.000 0.00 0.00 0.00 4.16
2158 2267 1.510480 GGCACACTCTCAAGCCACAC 61.510 60.000 0.00 0.00 46.26 3.82
2159 2268 1.227943 GGCACACTCTCAAGCCACA 60.228 57.895 0.00 0.00 46.26 4.17
2160 2269 3.660621 GGCACACTCTCAAGCCAC 58.339 61.111 0.00 0.00 46.26 5.01
2163 2272 2.331132 GGCAGGCACACTCTCAAGC 61.331 63.158 0.00 0.00 0.00 4.01
2164 2273 0.954449 CAGGCAGGCACACTCTCAAG 60.954 60.000 0.00 0.00 0.00 3.02
2165 2274 1.071987 CAGGCAGGCACACTCTCAA 59.928 57.895 0.00 0.00 0.00 3.02
2166 2275 2.745698 CAGGCAGGCACACTCTCA 59.254 61.111 0.00 0.00 0.00 3.27
2167 2276 2.744768 AAGCAGGCAGGCACACTCTC 62.745 60.000 0.00 0.00 35.83 3.20
2168 2277 2.827129 AAGCAGGCAGGCACACTCT 61.827 57.895 0.00 0.00 35.83 3.24
2169 2278 2.282040 AAGCAGGCAGGCACACTC 60.282 61.111 0.00 0.00 35.83 3.51
2170 2279 2.596631 CAAGCAGGCAGGCACACT 60.597 61.111 0.00 0.00 35.83 3.55
2171 2280 3.677648 CCAAGCAGGCAGGCACAC 61.678 66.667 0.00 0.00 35.83 3.82
2172 2281 4.208403 ACCAAGCAGGCAGGCACA 62.208 61.111 0.00 0.00 43.14 4.57
2173 2282 3.677648 CACCAAGCAGGCAGGCAC 61.678 66.667 0.00 0.00 43.14 5.01
2174 2283 4.208403 ACACCAAGCAGGCAGGCA 62.208 61.111 0.00 0.00 43.14 4.75
2175 2284 3.677648 CACACCAAGCAGGCAGGC 61.678 66.667 3.13 0.00 43.14 4.85
2176 2285 3.677648 GCACACCAAGCAGGCAGG 61.678 66.667 0.00 0.00 43.14 4.85
2177 2286 2.209064 GATGCACACCAAGCAGGCAG 62.209 60.000 0.00 0.00 46.36 4.85
2178 2287 2.203523 ATGCACACCAAGCAGGCA 60.204 55.556 0.00 0.00 46.36 4.75
2179 2288 2.209064 CTGATGCACACCAAGCAGGC 62.209 60.000 0.00 0.00 46.36 4.85
2180 2289 1.880894 CTGATGCACACCAAGCAGG 59.119 57.895 0.00 0.00 46.36 4.85
2181 2290 1.211969 GCTGATGCACACCAAGCAG 59.788 57.895 0.00 0.00 46.36 4.24
2183 2292 1.211969 CAGCTGATGCACACCAAGC 59.788 57.895 8.42 0.00 42.74 4.01
2184 2293 0.240145 CACAGCTGATGCACACCAAG 59.760 55.000 23.35 0.00 42.74 3.61
2185 2294 0.466007 ACACAGCTGATGCACACCAA 60.466 50.000 23.35 0.00 42.74 3.67
2186 2295 1.148949 ACACAGCTGATGCACACCA 59.851 52.632 23.35 0.00 42.74 4.17
2187 2296 1.577922 CACACAGCTGATGCACACC 59.422 57.895 23.35 0.00 42.74 4.16
2188 2297 0.886043 TCCACACAGCTGATGCACAC 60.886 55.000 23.35 0.00 42.74 3.82
2189 2298 0.886043 GTCCACACAGCTGATGCACA 60.886 55.000 23.35 2.35 42.74 4.57
2190 2299 0.604780 AGTCCACACAGCTGATGCAC 60.605 55.000 23.35 14.31 42.74 4.57
2191 2300 0.109153 AAGTCCACACAGCTGATGCA 59.891 50.000 23.35 0.80 42.74 3.96
2192 2301 0.520404 CAAGTCCACACAGCTGATGC 59.480 55.000 23.35 6.50 40.05 3.91
2193 2302 0.520404 GCAAGTCCACACAGCTGATG 59.480 55.000 23.35 17.49 0.00 3.07
2194 2303 0.399454 AGCAAGTCCACACAGCTGAT 59.601 50.000 23.35 4.88 35.51 2.90
2195 2304 1.832219 AGCAAGTCCACACAGCTGA 59.168 52.632 23.35 0.00 35.51 4.26
2196 2305 1.947013 CAGCAAGTCCACACAGCTG 59.053 57.895 13.48 13.48 43.28 4.24
2197 2306 1.895707 GCAGCAAGTCCACACAGCT 60.896 57.895 0.00 0.00 36.80 4.24
2198 2307 1.895707 AGCAGCAAGTCCACACAGC 60.896 57.895 0.00 0.00 0.00 4.40
2199 2308 1.512996 CCAGCAGCAAGTCCACACAG 61.513 60.000 0.00 0.00 0.00 3.66
2200 2309 1.526686 CCAGCAGCAAGTCCACACA 60.527 57.895 0.00 0.00 0.00 3.72
2201 2310 1.103398 AACCAGCAGCAAGTCCACAC 61.103 55.000 0.00 0.00 0.00 3.82
2202 2311 1.102809 CAACCAGCAGCAAGTCCACA 61.103 55.000 0.00 0.00 0.00 4.17
2203 2312 1.103398 ACAACCAGCAGCAAGTCCAC 61.103 55.000 0.00 0.00 0.00 4.02
2204 2313 1.102809 CACAACCAGCAGCAAGTCCA 61.103 55.000 0.00 0.00 0.00 4.02
2205 2314 1.103398 ACACAACCAGCAGCAAGTCC 61.103 55.000 0.00 0.00 0.00 3.85
2206 2315 0.029834 CACACAACCAGCAGCAAGTC 59.970 55.000 0.00 0.00 0.00 3.01
2207 2316 0.394216 TCACACAACCAGCAGCAAGT 60.394 50.000 0.00 0.00 0.00 3.16
2208 2317 0.309922 CTCACACAACCAGCAGCAAG 59.690 55.000 0.00 0.00 0.00 4.01
2209 2318 0.394216 ACTCACACAACCAGCAGCAA 60.394 50.000 0.00 0.00 0.00 3.91
2210 2319 1.096967 CACTCACACAACCAGCAGCA 61.097 55.000 0.00 0.00 0.00 4.41
2211 2320 1.097547 ACACTCACACAACCAGCAGC 61.098 55.000 0.00 0.00 0.00 5.25
2212 2321 0.659427 CACACTCACACAACCAGCAG 59.341 55.000 0.00 0.00 0.00 4.24
2213 2322 0.035534 ACACACTCACACAACCAGCA 60.036 50.000 0.00 0.00 0.00 4.41
2214 2323 0.657840 GACACACTCACACAACCAGC 59.342 55.000 0.00 0.00 0.00 4.85
2215 2324 1.935873 CAGACACACTCACACAACCAG 59.064 52.381 0.00 0.00 0.00 4.00
2216 2325 1.277842 ACAGACACACTCACACAACCA 59.722 47.619 0.00 0.00 0.00 3.67
2217 2326 2.024176 ACAGACACACTCACACAACC 57.976 50.000 0.00 0.00 0.00 3.77
2218 2327 4.024893 CCATAACAGACACACTCACACAAC 60.025 45.833 0.00 0.00 0.00 3.32
2219 2328 4.126437 CCATAACAGACACACTCACACAA 58.874 43.478 0.00 0.00 0.00 3.33
2220 2329 3.133901 ACCATAACAGACACACTCACACA 59.866 43.478 0.00 0.00 0.00 3.72
2221 2330 3.728845 ACCATAACAGACACACTCACAC 58.271 45.455 0.00 0.00 0.00 3.82
2222 2331 4.415881 AACCATAACAGACACACTCACA 57.584 40.909 0.00 0.00 0.00 3.58
2223 2332 6.854496 TTTAACCATAACAGACACACTCAC 57.146 37.500 0.00 0.00 0.00 3.51
2224 2333 7.867305 TTTTTAACCATAACAGACACACTCA 57.133 32.000 0.00 0.00 0.00 3.41
2249 2358 9.691362 CTTTGTTTGGTATTATTACAAGCTGTT 57.309 29.630 0.00 0.00 31.19 3.16
2250 2359 8.303876 CCTTTGTTTGGTATTATTACAAGCTGT 58.696 33.333 0.00 0.00 31.19 4.40
2251 2360 7.759433 CCCTTTGTTTGGTATTATTACAAGCTG 59.241 37.037 0.00 0.00 31.19 4.24
2252 2361 7.578763 GCCCTTTGTTTGGTATTATTACAAGCT 60.579 37.037 0.00 0.00 31.19 3.74
2253 2362 6.533723 GCCCTTTGTTTGGTATTATTACAAGC 59.466 38.462 0.00 0.00 31.19 4.01
2254 2363 7.836842 AGCCCTTTGTTTGGTATTATTACAAG 58.163 34.615 0.00 0.00 31.19 3.16
2255 2364 7.784470 AGCCCTTTGTTTGGTATTATTACAA 57.216 32.000 0.00 0.00 0.00 2.41
2256 2365 7.784470 AAGCCCTTTGTTTGGTATTATTACA 57.216 32.000 0.00 0.00 0.00 2.41
2257 2366 8.308207 TGAAAGCCCTTTGTTTGGTATTATTAC 58.692 33.333 0.00 0.00 32.11 1.89
2258 2367 8.423906 TGAAAGCCCTTTGTTTGGTATTATTA 57.576 30.769 0.00 0.00 32.11 0.98
2259 2368 7.309770 TGAAAGCCCTTTGTTTGGTATTATT 57.690 32.000 0.00 0.00 32.11 1.40
2260 2369 6.926630 TGAAAGCCCTTTGTTTGGTATTAT 57.073 33.333 0.00 0.00 32.11 1.28
2261 2370 6.732896 TTGAAAGCCCTTTGTTTGGTATTA 57.267 33.333 0.00 0.00 32.11 0.98
2262 2371 5.622346 TTGAAAGCCCTTTGTTTGGTATT 57.378 34.783 0.00 0.00 32.11 1.89
2263 2372 5.543790 AGATTGAAAGCCCTTTGTTTGGTAT 59.456 36.000 0.00 0.00 32.11 2.73
2264 2373 4.898861 AGATTGAAAGCCCTTTGTTTGGTA 59.101 37.500 0.00 0.00 32.11 3.25
2265 2374 3.711190 AGATTGAAAGCCCTTTGTTTGGT 59.289 39.130 0.00 0.00 32.11 3.67
2266 2375 4.341366 AGATTGAAAGCCCTTTGTTTGG 57.659 40.909 0.00 0.00 32.11 3.28
2267 2376 6.682423 AAAAGATTGAAAGCCCTTTGTTTG 57.318 33.333 0.00 0.00 32.11 2.93
2268 2377 6.883756 TCAAAAAGATTGAAAGCCCTTTGTTT 59.116 30.769 0.00 0.00 32.11 2.83
2269 2378 6.413892 TCAAAAAGATTGAAAGCCCTTTGTT 58.586 32.000 0.00 0.00 32.11 2.83
2270 2379 5.988287 TCAAAAAGATTGAAAGCCCTTTGT 58.012 33.333 0.00 0.00 32.11 2.83
2271 2380 6.539826 ACTTCAAAAAGATTGAAAGCCCTTTG 59.460 34.615 5.28 0.00 37.89 2.77
2272 2381 6.539826 CACTTCAAAAAGATTGAAAGCCCTTT 59.460 34.615 5.28 0.00 37.89 3.11
2273 2382 6.051074 CACTTCAAAAAGATTGAAAGCCCTT 58.949 36.000 5.28 0.00 37.89 3.95
2274 2383 5.604565 CACTTCAAAAAGATTGAAAGCCCT 58.395 37.500 5.28 0.00 37.89 5.19
2275 2384 4.212004 GCACTTCAAAAAGATTGAAAGCCC 59.788 41.667 12.97 0.00 37.89 5.19
2276 2385 4.810491 TGCACTTCAAAAAGATTGAAAGCC 59.190 37.500 17.69 6.53 38.06 4.35
2277 2386 5.971895 TGCACTTCAAAAAGATTGAAAGC 57.028 34.783 15.39 15.39 37.89 3.51
2278 2387 8.133754 TCAATGCACTTCAAAAAGATTGAAAG 57.866 30.769 5.28 2.95 37.89 2.62
2279 2388 8.552865 CATCAATGCACTTCAAAAAGATTGAAA 58.447 29.630 5.28 0.00 37.07 2.69
2280 2389 7.927092 TCATCAATGCACTTCAAAAAGATTGAA 59.073 29.630 0.00 3.84 37.07 2.69
2281 2390 7.435305 TCATCAATGCACTTCAAAAAGATTGA 58.565 30.769 0.00 0.00 37.51 2.57
2282 2391 7.646446 TCATCAATGCACTTCAAAAAGATTG 57.354 32.000 0.00 0.00 36.30 2.67
2283 2392 8.842358 ATTCATCAATGCACTTCAAAAAGATT 57.158 26.923 0.00 0.00 36.30 2.40
2284 2393 8.717821 CAATTCATCAATGCACTTCAAAAAGAT 58.282 29.630 0.00 0.00 36.30 2.40
2285 2394 7.307514 GCAATTCATCAATGCACTTCAAAAAGA 60.308 33.333 0.00 0.00 36.30 2.52
2286 2395 6.795114 GCAATTCATCAATGCACTTCAAAAAG 59.205 34.615 0.00 0.00 38.54 2.27
2287 2396 6.564312 CGCAATTCATCAATGCACTTCAAAAA 60.564 34.615 0.00 0.00 0.00 1.94
2288 2397 5.107414 CGCAATTCATCAATGCACTTCAAAA 60.107 36.000 0.00 0.00 0.00 2.44
2289 2398 4.386350 CGCAATTCATCAATGCACTTCAAA 59.614 37.500 0.00 0.00 0.00 2.69
2290 2399 3.921630 CGCAATTCATCAATGCACTTCAA 59.078 39.130 0.00 0.00 0.00 2.69
2291 2400 3.190953 TCGCAATTCATCAATGCACTTCA 59.809 39.130 0.00 0.00 0.00 3.02
2292 2401 3.761657 TCGCAATTCATCAATGCACTTC 58.238 40.909 0.00 0.00 0.00 3.01
2293 2402 3.853831 TCGCAATTCATCAATGCACTT 57.146 38.095 0.00 0.00 0.00 3.16
2294 2403 5.700722 ATATCGCAATTCATCAATGCACT 57.299 34.783 0.00 0.00 0.00 4.40
2295 2404 6.147581 AGAATATCGCAATTCATCAATGCAC 58.852 36.000 10.82 0.00 38.16 4.57
2296 2405 6.016943 TGAGAATATCGCAATTCATCAATGCA 60.017 34.615 10.82 0.00 38.16 3.96
2297 2406 6.376177 TGAGAATATCGCAATTCATCAATGC 58.624 36.000 10.82 0.00 38.16 3.56
2298 2407 7.534239 CACTGAGAATATCGCAATTCATCAATG 59.466 37.037 10.82 8.22 38.16 2.82
2299 2408 7.228108 ACACTGAGAATATCGCAATTCATCAAT 59.772 33.333 10.82 1.97 38.16 2.57
2300 2409 6.539826 ACACTGAGAATATCGCAATTCATCAA 59.460 34.615 10.82 0.00 38.16 2.57
2301 2410 6.051074 ACACTGAGAATATCGCAATTCATCA 58.949 36.000 10.82 9.91 38.16 3.07
2302 2411 6.536731 ACACTGAGAATATCGCAATTCATC 57.463 37.500 10.82 6.99 38.16 2.92
2303 2412 6.932356 AACACTGAGAATATCGCAATTCAT 57.068 33.333 10.82 0.00 38.16 2.57
2304 2413 6.595326 AGAAACACTGAGAATATCGCAATTCA 59.405 34.615 10.82 0.00 38.16 2.57
2305 2414 7.009568 AGAAACACTGAGAATATCGCAATTC 57.990 36.000 0.00 2.37 36.33 2.17
2306 2415 6.992063 AGAAACACTGAGAATATCGCAATT 57.008 33.333 0.00 0.00 0.00 2.32
2307 2416 7.268586 ACTAGAAACACTGAGAATATCGCAAT 58.731 34.615 0.00 0.00 0.00 3.56
2308 2417 6.631016 ACTAGAAACACTGAGAATATCGCAA 58.369 36.000 0.00 0.00 0.00 4.85
2309 2418 6.208988 ACTAGAAACACTGAGAATATCGCA 57.791 37.500 0.00 0.00 0.00 5.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.