Multiple sequence alignment - TraesCS7B01G418800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G418800 chr7B 100.000 3354 0 0 1 3354 687101177 687104530 0.000000e+00 6194.0
1 TraesCS7B01G418800 chr7B 90.465 1678 94 29 1707 3354 687806516 687804875 0.000000e+00 2152.0
2 TraesCS7B01G418800 chr7B 78.977 352 36 20 546 876 687806929 687806595 4.390000e-49 206.0
3 TraesCS7B01G418800 chr7B 86.813 91 6 3 2491 2578 687804370 687804283 2.750000e-16 97.1
4 TraesCS7B01G418800 chr7B 97.059 34 0 1 37 69 671281811 671281778 4.670000e-04 56.5
5 TraesCS7B01G418800 chr7A 84.025 1903 159 80 555 2437 696781332 696783109 0.000000e+00 1696.0
6 TraesCS7B01G418800 chr7A 88.716 257 20 4 2491 2743 696783466 696783717 4.200000e-79 305.0
7 TraesCS7B01G418800 chr7A 100.000 29 0 0 515 543 696781304 696781332 2.000000e-03 54.7
8 TraesCS7B01G418800 chr7D 89.102 1358 85 26 1404 2743 604325876 604324564 0.000000e+00 1629.0
9 TraesCS7B01G418800 chr7D 80.355 789 74 36 549 1304 604326645 604325905 1.070000e-144 523.0
10 TraesCS7B01G418800 chr7D 85.714 273 20 6 65 318 375298892 375298620 1.530000e-68 270.0
11 TraesCS7B01G418800 chr7D 85.305 279 21 8 65 323 576644711 576644989 1.530000e-68 270.0
12 TraesCS7B01G418800 chr7D 84.229 279 24 8 65 323 613019841 613020119 1.540000e-63 254.0
13 TraesCS7B01G418800 chr7D 93.694 111 6 1 3245 3354 604324234 604324124 7.440000e-37 165.0
14 TraesCS7B01G418800 chr7D 83.696 92 10 4 1009 1097 571895960 571895871 7.710000e-12 82.4
15 TraesCS7B01G418800 chr6D 84.814 349 22 10 5 323 313020864 313020517 4.170000e-84 322.0
16 TraesCS7B01G418800 chr6D 83.381 349 27 9 5 322 451075939 451075591 9.100000e-76 294.0
17 TraesCS7B01G418800 chr6D 85.305 279 21 9 65 323 147887731 147887453 1.530000e-68 270.0
18 TraesCS7B01G418800 chr4D 84.330 351 26 12 2 323 489165138 489165488 1.940000e-82 316.0
19 TraesCS7B01G418800 chr4D 82.310 277 29 8 65 321 392725696 392725972 4.360000e-54 222.0
20 TraesCS7B01G418800 chr2D 83.143 350 31 10 2 323 531682993 531683342 9.100000e-76 294.0
21 TraesCS7B01G418800 chr2D 85.714 280 19 8 65 323 425744477 425744756 3.300000e-70 276.0
22 TraesCS7B01G418800 chr3B 86.429 280 16 12 65 323 349938893 349939171 1.520000e-73 287.0
23 TraesCS7B01G418800 chr3B 84.016 244 19 11 100 323 49156329 49156572 2.030000e-52 217.0
24 TraesCS7B01G418800 chr6A 85.053 281 18 13 65 323 577715781 577715503 7.140000e-67 265.0
25 TraesCS7B01G418800 chr1D 84.946 279 22 8 65 323 318104830 318104552 7.140000e-67 265.0
26 TraesCS7B01G418800 chr5D 83.764 271 27 5 65 318 60466321 60466051 1.200000e-59 241.0
27 TraesCS7B01G418800 chr5D 85.714 245 14 10 65 289 539709830 539710073 4.320000e-59 239.0
28 TraesCS7B01G418800 chr2B 83.270 263 32 10 65 322 340595950 340595695 7.240000e-57 231.0
29 TraesCS7B01G418800 chr3D 83.333 114 8 4 6 108 570395816 570395703 9.910000e-16 95.3
30 TraesCS7B01G418800 chr1A 90.411 73 6 1 1009 1081 167160498 167160569 9.910000e-16 95.3
31 TraesCS7B01G418800 chr3A 90.141 71 5 2 2 70 31563005 31563075 1.280000e-14 91.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G418800 chr7B 687101177 687104530 3353 False 6194.000000 6194 100.000000 1 3354 1 chr7B.!!$F1 3353
1 TraesCS7B01G418800 chr7B 687804283 687806929 2646 True 818.366667 2152 85.418333 546 3354 3 chr7B.!!$R2 2808
2 TraesCS7B01G418800 chr7A 696781304 696783717 2413 False 685.233333 1696 90.913667 515 2743 3 chr7A.!!$F1 2228
3 TraesCS7B01G418800 chr7D 604324124 604326645 2521 True 772.333333 1629 87.717000 549 3354 3 chr7D.!!$R3 2805

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
183 184 0.032615 AGGTAGGTGGCTGAGAGAGG 60.033 60.0 0.00 0.0 0.00 3.69 F
263 264 0.033781 AAACGTGTGGGCGCTAGTTA 59.966 50.0 7.64 0.0 34.88 2.24 F
446 447 0.038343 GAGATCTCGATGAGGCCAGC 60.038 60.0 7.04 0.0 0.00 4.85 F
1509 1598 0.251297 CAACAAGATGGCCAGGGTGA 60.251 55.0 13.05 0.0 0.00 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1958 2056 0.228742 CCTCGTCGTCGTTGTTGTTG 59.771 55.000 1.33 0.00 38.33 3.33 R
2249 2361 4.035675 CCTTGCGTGGAGGAGAATTAATTC 59.964 45.833 18.70 18.70 36.33 2.17 R
2289 2406 0.541063 TACTCGGTGGTGGAAGAGCA 60.541 55.000 0.00 0.00 34.31 4.26 R
3126 3566 0.388659 ATCCGAAGAGCTAGCAGCAG 59.611 55.000 18.83 3.92 45.56 4.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 6.879962 CAACAGTTGCAGTTATTCAAAATGG 58.120 36.000 0.00 0.00 0.00 3.16
30 31 4.990426 ACAGTTGCAGTTATTCAAAATGGC 59.010 37.500 0.00 0.00 0.00 4.40
31 32 4.989797 CAGTTGCAGTTATTCAAAATGGCA 59.010 37.500 0.00 0.00 0.00 4.92
32 33 5.640357 CAGTTGCAGTTATTCAAAATGGCAT 59.360 36.000 0.00 0.00 0.00 4.40
33 34 5.870978 AGTTGCAGTTATTCAAAATGGCATC 59.129 36.000 0.00 0.00 0.00 3.91
34 35 5.664294 TGCAGTTATTCAAAATGGCATCT 57.336 34.783 0.00 0.00 0.00 2.90
35 36 5.412640 TGCAGTTATTCAAAATGGCATCTG 58.587 37.500 0.00 1.48 0.00 2.90
36 37 4.807304 GCAGTTATTCAAAATGGCATCTGG 59.193 41.667 0.00 0.00 0.00 3.86
37 38 4.807304 CAGTTATTCAAAATGGCATCTGGC 59.193 41.667 0.00 0.00 43.74 4.85
44 45 4.402851 TGGCATCTGGCAGTTGAC 57.597 55.556 25.68 23.84 46.12 3.18
45 46 1.303561 TGGCATCTGGCAGTTGACC 60.304 57.895 24.80 23.08 46.12 4.02
46 47 1.782201 TGGCATCTGGCAGTTGACCT 61.782 55.000 24.80 0.00 46.12 3.85
47 48 2.177950 GCATCTGGCAGTTGACCTG 58.822 57.895 25.68 11.21 43.97 4.00
48 49 0.321919 GCATCTGGCAGTTGACCTGA 60.322 55.000 25.68 0.44 44.49 3.86
49 50 1.735386 CATCTGGCAGTTGACCTGAG 58.265 55.000 18.59 0.00 44.49 3.35
50 51 1.277273 CATCTGGCAGTTGACCTGAGA 59.723 52.381 18.59 0.00 44.49 3.27
51 52 1.649321 TCTGGCAGTTGACCTGAGAT 58.351 50.000 15.27 0.00 44.49 2.75
52 53 1.277273 TCTGGCAGTTGACCTGAGATG 59.723 52.381 15.27 0.00 44.49 2.90
53 54 1.277273 CTGGCAGTTGACCTGAGATGA 59.723 52.381 6.28 0.00 44.49 2.92
54 55 1.002430 TGGCAGTTGACCTGAGATGAC 59.998 52.381 0.00 0.00 44.49 3.06
55 56 1.002430 GGCAGTTGACCTGAGATGACA 59.998 52.381 0.00 0.00 44.49 3.58
56 57 2.550855 GGCAGTTGACCTGAGATGACAA 60.551 50.000 0.00 0.00 44.49 3.18
57 58 2.481952 GCAGTTGACCTGAGATGACAAC 59.518 50.000 0.00 0.00 44.49 3.32
59 60 4.000331 AGTTGACCTGAGATGACAACTG 58.000 45.455 0.00 0.00 45.70 3.16
60 61 2.462456 TGACCTGAGATGACAACTGC 57.538 50.000 0.00 0.00 0.00 4.40
61 62 1.693606 TGACCTGAGATGACAACTGCA 59.306 47.619 0.00 0.00 0.00 4.41
62 63 2.289257 TGACCTGAGATGACAACTGCAG 60.289 50.000 13.48 13.48 0.00 4.41
63 64 1.696336 ACCTGAGATGACAACTGCAGT 59.304 47.619 15.25 15.25 0.00 4.40
64 65 2.105477 ACCTGAGATGACAACTGCAGTT 59.895 45.455 26.36 26.36 39.12 3.16
79 80 3.641437 GCAGTTGGCAATTGTAGTTCA 57.359 42.857 21.58 0.00 43.97 3.18
80 81 3.568538 GCAGTTGGCAATTGTAGTTCAG 58.431 45.455 21.58 0.00 43.97 3.02
81 82 3.568538 CAGTTGGCAATTGTAGTTCAGC 58.431 45.455 13.96 1.40 0.00 4.26
82 83 2.226437 AGTTGGCAATTGTAGTTCAGCG 59.774 45.455 1.92 0.00 0.00 5.18
83 84 2.177394 TGGCAATTGTAGTTCAGCGA 57.823 45.000 7.40 0.00 0.00 4.93
84 85 1.804151 TGGCAATTGTAGTTCAGCGAC 59.196 47.619 7.40 0.00 0.00 5.19
85 86 1.804151 GGCAATTGTAGTTCAGCGACA 59.196 47.619 7.40 0.00 0.00 4.35
86 87 2.420022 GGCAATTGTAGTTCAGCGACAT 59.580 45.455 7.40 0.00 32.89 3.06
87 88 3.419915 GCAATTGTAGTTCAGCGACATG 58.580 45.455 7.40 0.00 32.89 3.21
88 89 3.728864 GCAATTGTAGTTCAGCGACATGG 60.729 47.826 7.40 0.00 32.89 3.66
89 90 1.438651 TTGTAGTTCAGCGACATGGC 58.561 50.000 0.00 0.00 32.89 4.40
90 91 0.320050 TGTAGTTCAGCGACATGGCA 59.680 50.000 0.00 0.00 34.64 4.92
91 92 1.270571 TGTAGTTCAGCGACATGGCAA 60.271 47.619 0.00 0.00 34.64 4.52
92 93 2.009774 GTAGTTCAGCGACATGGCAAT 58.990 47.619 0.00 0.00 34.64 3.56
93 94 1.538047 AGTTCAGCGACATGGCAATT 58.462 45.000 0.00 0.00 34.64 2.32
94 95 1.200716 AGTTCAGCGACATGGCAATTG 59.799 47.619 0.00 0.00 34.64 2.32
95 96 0.109179 TTCAGCGACATGGCAATTGC 60.109 50.000 22.47 22.47 41.14 3.56
96 97 1.213275 CAGCGACATGGCAATTGCA 59.787 52.632 30.32 17.35 44.36 4.08
97 98 0.800683 CAGCGACATGGCAATTGCAG 60.801 55.000 30.32 21.03 44.36 4.41
98 99 1.213537 GCGACATGGCAATTGCAGT 59.786 52.632 30.32 23.85 44.36 4.40
99 100 0.388907 GCGACATGGCAATTGCAGTT 60.389 50.000 30.32 12.46 44.36 3.16
100 101 1.135431 GCGACATGGCAATTGCAGTTA 60.135 47.619 30.32 14.44 44.36 2.24
101 102 2.670789 GCGACATGGCAATTGCAGTTAA 60.671 45.455 30.32 11.46 44.36 2.01
102 103 3.573598 CGACATGGCAATTGCAGTTAAA 58.426 40.909 30.32 9.75 44.36 1.52
103 104 3.364621 CGACATGGCAATTGCAGTTAAAC 59.635 43.478 30.32 12.61 44.36 2.01
104 105 3.316283 ACATGGCAATTGCAGTTAAACG 58.684 40.909 30.32 12.28 44.36 3.60
105 106 2.430546 TGGCAATTGCAGTTAAACGG 57.569 45.000 30.32 0.00 44.36 4.44
106 107 1.957177 TGGCAATTGCAGTTAAACGGA 59.043 42.857 30.32 0.00 44.36 4.69
107 108 2.287909 TGGCAATTGCAGTTAAACGGAC 60.288 45.455 30.32 9.99 44.36 4.79
108 109 2.287909 GGCAATTGCAGTTAAACGGACA 60.288 45.455 30.32 0.00 44.36 4.02
109 110 3.574614 GCAATTGCAGTTAAACGGACAT 58.425 40.909 25.36 0.00 41.59 3.06
110 111 3.987220 GCAATTGCAGTTAAACGGACATT 59.013 39.130 25.36 0.00 41.59 2.71
111 112 4.143347 GCAATTGCAGTTAAACGGACATTG 60.143 41.667 25.36 0.00 41.59 2.82
112 113 5.218885 CAATTGCAGTTAAACGGACATTGA 58.781 37.500 0.00 0.00 0.00 2.57
113 114 4.902443 TTGCAGTTAAACGGACATTGAA 57.098 36.364 0.00 0.00 0.00 2.69
114 115 4.481930 TGCAGTTAAACGGACATTGAAG 57.518 40.909 0.00 0.00 0.00 3.02
115 116 4.130857 TGCAGTTAAACGGACATTGAAGA 58.869 39.130 0.00 0.00 0.00 2.87
116 117 4.213270 TGCAGTTAAACGGACATTGAAGAG 59.787 41.667 0.00 0.00 0.00 2.85
117 118 4.378459 GCAGTTAAACGGACATTGAAGAGG 60.378 45.833 0.00 0.00 0.00 3.69
118 119 4.154195 CAGTTAAACGGACATTGAAGAGGG 59.846 45.833 0.00 0.00 0.00 4.30
119 120 2.951229 AAACGGACATTGAAGAGGGT 57.049 45.000 0.00 0.00 0.00 4.34
120 121 2.474410 AACGGACATTGAAGAGGGTC 57.526 50.000 0.00 0.00 0.00 4.46
121 122 0.613777 ACGGACATTGAAGAGGGTCC 59.386 55.000 0.00 0.00 44.97 4.46
122 123 3.460648 GGACATTGAAGAGGGTCCG 57.539 57.895 0.00 0.00 40.29 4.79
123 124 0.107654 GGACATTGAAGAGGGTCCGG 60.108 60.000 0.00 0.00 40.29 5.14
124 125 0.902531 GACATTGAAGAGGGTCCGGA 59.097 55.000 0.00 0.00 0.00 5.14
125 126 0.613777 ACATTGAAGAGGGTCCGGAC 59.386 55.000 27.04 27.04 0.00 4.79
137 138 1.084289 GTCCGGACCATAACAACTGC 58.916 55.000 24.75 0.00 0.00 4.40
138 139 0.390603 TCCGGACCATAACAACTGCG 60.391 55.000 0.00 0.00 0.00 5.18
139 140 1.366111 CCGGACCATAACAACTGCGG 61.366 60.000 0.00 0.00 0.00 5.69
140 141 1.366111 CGGACCATAACAACTGCGGG 61.366 60.000 0.00 0.00 0.00 6.13
141 142 0.322187 GGACCATAACAACTGCGGGT 60.322 55.000 0.00 0.00 0.00 5.28
142 143 1.065998 GGACCATAACAACTGCGGGTA 60.066 52.381 0.00 0.00 0.00 3.69
143 144 2.004733 GACCATAACAACTGCGGGTAC 58.995 52.381 0.00 0.00 0.00 3.34
144 145 1.003851 CCATAACAACTGCGGGTACG 58.996 55.000 0.00 0.00 44.63 3.67
177 178 3.694746 CGTGAGGTAGGTGGCTGA 58.305 61.111 0.00 0.00 0.00 4.26
178 179 1.513158 CGTGAGGTAGGTGGCTGAG 59.487 63.158 0.00 0.00 0.00 3.35
179 180 0.965866 CGTGAGGTAGGTGGCTGAGA 60.966 60.000 0.00 0.00 0.00 3.27
180 181 0.820871 GTGAGGTAGGTGGCTGAGAG 59.179 60.000 0.00 0.00 0.00 3.20
181 182 0.704664 TGAGGTAGGTGGCTGAGAGA 59.295 55.000 0.00 0.00 0.00 3.10
182 183 1.341482 TGAGGTAGGTGGCTGAGAGAG 60.341 57.143 0.00 0.00 0.00 3.20
183 184 0.032615 AGGTAGGTGGCTGAGAGAGG 60.033 60.000 0.00 0.00 0.00 3.69
184 185 0.324830 GGTAGGTGGCTGAGAGAGGT 60.325 60.000 0.00 0.00 0.00 3.85
185 186 1.107945 GTAGGTGGCTGAGAGAGGTC 58.892 60.000 0.00 0.00 0.00 3.85
186 187 0.394488 TAGGTGGCTGAGAGAGGTCG 60.394 60.000 0.00 0.00 0.00 4.79
187 188 1.979693 GGTGGCTGAGAGAGGTCGT 60.980 63.158 0.00 0.00 0.00 4.34
188 189 1.214062 GTGGCTGAGAGAGGTCGTG 59.786 63.158 0.00 0.00 0.00 4.35
189 190 1.228583 TGGCTGAGAGAGGTCGTGT 60.229 57.895 0.00 0.00 0.00 4.49
190 191 1.214062 GGCTGAGAGAGGTCGTGTG 59.786 63.158 0.00 0.00 0.00 3.82
191 192 1.214062 GCTGAGAGAGGTCGTGTGG 59.786 63.158 0.00 0.00 0.00 4.17
192 193 1.886585 CTGAGAGAGGTCGTGTGGG 59.113 63.158 0.00 0.00 0.00 4.61
193 194 2.219325 CTGAGAGAGGTCGTGTGGGC 62.219 65.000 0.00 0.00 0.00 5.36
194 195 3.343788 GAGAGAGGTCGTGTGGGCG 62.344 68.421 0.00 0.00 0.00 6.13
195 196 3.681835 GAGAGGTCGTGTGGGCGT 61.682 66.667 0.00 0.00 0.00 5.68
196 197 3.222354 GAGAGGTCGTGTGGGCGTT 62.222 63.158 0.00 0.00 0.00 4.84
197 198 1.870055 GAGAGGTCGTGTGGGCGTTA 61.870 60.000 0.00 0.00 0.00 3.18
198 199 1.217244 GAGGTCGTGTGGGCGTTAT 59.783 57.895 0.00 0.00 0.00 1.89
199 200 0.390735 GAGGTCGTGTGGGCGTTATT 60.391 55.000 0.00 0.00 0.00 1.40
200 201 0.390735 AGGTCGTGTGGGCGTTATTC 60.391 55.000 0.00 0.00 0.00 1.75
201 202 0.671163 GGTCGTGTGGGCGTTATTCA 60.671 55.000 0.00 0.00 0.00 2.57
202 203 1.365699 GTCGTGTGGGCGTTATTCAT 58.634 50.000 0.00 0.00 0.00 2.57
203 204 1.735571 GTCGTGTGGGCGTTATTCATT 59.264 47.619 0.00 0.00 0.00 2.57
204 205 2.160813 GTCGTGTGGGCGTTATTCATTT 59.839 45.455 0.00 0.00 0.00 2.32
205 206 2.814919 TCGTGTGGGCGTTATTCATTTT 59.185 40.909 0.00 0.00 0.00 1.82
206 207 2.914214 CGTGTGGGCGTTATTCATTTTG 59.086 45.455 0.00 0.00 0.00 2.44
207 208 2.666022 GTGTGGGCGTTATTCATTTTGC 59.334 45.455 0.00 0.00 0.00 3.68
208 209 2.297315 TGTGGGCGTTATTCATTTTGCA 59.703 40.909 0.00 0.00 0.00 4.08
209 210 2.666022 GTGGGCGTTATTCATTTTGCAC 59.334 45.455 0.00 0.00 0.00 4.57
210 211 2.297315 TGGGCGTTATTCATTTTGCACA 59.703 40.909 0.00 0.00 32.55 4.57
211 212 2.666022 GGGCGTTATTCATTTTGCACAC 59.334 45.455 0.00 0.00 0.00 3.82
212 213 3.312828 GGCGTTATTCATTTTGCACACA 58.687 40.909 0.00 0.00 0.00 3.72
213 214 3.121113 GGCGTTATTCATTTTGCACACAC 59.879 43.478 0.00 0.00 0.00 3.82
214 215 3.181554 GCGTTATTCATTTTGCACACACG 60.182 43.478 0.00 0.00 0.00 4.49
215 216 3.971871 CGTTATTCATTTTGCACACACGT 59.028 39.130 0.00 0.00 0.00 4.49
216 217 5.140872 CGTTATTCATTTTGCACACACGTA 58.859 37.500 0.00 0.00 0.00 3.57
217 218 5.280446 CGTTATTCATTTTGCACACACGTAG 59.720 40.000 0.00 0.00 0.00 3.51
218 219 3.617540 TTCATTTTGCACACACGTAGG 57.382 42.857 0.00 0.00 0.00 3.18
219 220 1.265635 TCATTTTGCACACACGTAGGC 59.734 47.619 0.00 0.00 0.00 3.93
220 221 0.237235 ATTTTGCACACACGTAGGCG 59.763 50.000 0.00 0.00 44.93 5.52
230 231 3.066190 CGTAGGCGTGTGGGAGGA 61.066 66.667 0.00 0.00 0.00 3.71
231 232 2.893398 GTAGGCGTGTGGGAGGAG 59.107 66.667 0.00 0.00 0.00 3.69
232 233 3.075005 TAGGCGTGTGGGAGGAGC 61.075 66.667 0.00 0.00 0.00 4.70
241 242 4.404098 GGGAGGAGCCGCGGAAAA 62.404 66.667 33.48 0.00 37.63 2.29
242 243 2.359478 GGAGGAGCCGCGGAAAAA 60.359 61.111 33.48 0.00 0.00 1.94
259 260 4.144418 AAAAACGTGTGGGCGCTA 57.856 50.000 7.64 0.00 34.88 4.26
260 261 1.946267 AAAAACGTGTGGGCGCTAG 59.054 52.632 7.64 0.00 34.88 3.42
261 262 0.816421 AAAAACGTGTGGGCGCTAGT 60.816 50.000 7.64 0.00 34.88 2.57
262 263 0.816421 AAAACGTGTGGGCGCTAGTT 60.816 50.000 7.64 2.17 34.88 2.24
263 264 0.033781 AAACGTGTGGGCGCTAGTTA 59.966 50.000 7.64 0.00 34.88 2.24
264 265 0.248289 AACGTGTGGGCGCTAGTTAT 59.752 50.000 7.64 0.00 34.88 1.89
265 266 0.248289 ACGTGTGGGCGCTAGTTATT 59.752 50.000 7.64 0.00 34.88 1.40
266 267 1.338389 ACGTGTGGGCGCTAGTTATTT 60.338 47.619 7.64 0.00 34.88 1.40
267 268 1.735571 CGTGTGGGCGCTAGTTATTTT 59.264 47.619 7.64 0.00 0.00 1.82
268 269 2.475519 CGTGTGGGCGCTAGTTATTTTG 60.476 50.000 7.64 0.00 0.00 2.44
269 270 1.470890 TGTGGGCGCTAGTTATTTTGC 59.529 47.619 7.64 0.00 0.00 3.68
270 271 1.099689 TGGGCGCTAGTTATTTTGCC 58.900 50.000 7.64 0.00 41.72 4.52
271 272 3.938653 GGCGCTAGTTATTTTGCCC 57.061 52.632 7.64 0.00 36.51 5.36
272 273 1.099689 GGCGCTAGTTATTTTGCCCA 58.900 50.000 7.64 0.00 36.51 5.36
273 274 1.202256 GGCGCTAGTTATTTTGCCCAC 60.202 52.381 7.64 0.00 36.51 4.61
274 275 1.470890 GCGCTAGTTATTTTGCCCACA 59.529 47.619 0.00 0.00 0.00 4.17
275 276 2.731027 GCGCTAGTTATTTTGCCCACAC 60.731 50.000 0.00 0.00 0.00 3.82
276 277 2.475519 CGCTAGTTATTTTGCCCACACG 60.476 50.000 0.00 0.00 0.00 4.49
277 278 2.486592 GCTAGTTATTTTGCCCACACGT 59.513 45.455 0.00 0.00 0.00 4.49
278 279 3.685756 GCTAGTTATTTTGCCCACACGTA 59.314 43.478 0.00 0.00 0.00 3.57
279 280 4.201783 GCTAGTTATTTTGCCCACACGTAG 60.202 45.833 0.00 0.00 0.00 3.51
280 281 3.078837 AGTTATTTTGCCCACACGTAGG 58.921 45.455 0.00 0.00 0.00 3.18
286 287 3.195002 CCCACACGTAGGCATGCG 61.195 66.667 12.44 7.45 40.72 4.73
287 288 3.195002 CCACACGTAGGCATGCGG 61.195 66.667 14.36 4.84 39.04 5.69
288 289 3.195002 CACACGTAGGCATGCGGG 61.195 66.667 10.16 10.16 44.33 6.13
289 290 3.702048 ACACGTAGGCATGCGGGT 61.702 61.111 11.85 11.85 46.95 5.28
290 291 2.435938 CACGTAGGCATGCGGGTT 60.436 61.111 14.36 0.00 39.04 4.11
291 292 2.435938 ACGTAGGCATGCGGGTTG 60.436 61.111 14.36 2.78 39.04 3.77
292 293 2.125310 CGTAGGCATGCGGGTTGA 60.125 61.111 12.44 0.00 0.00 3.18
293 294 1.523711 CGTAGGCATGCGGGTTGAT 60.524 57.895 12.44 0.00 0.00 2.57
294 295 1.498865 CGTAGGCATGCGGGTTGATC 61.499 60.000 12.44 0.00 0.00 2.92
295 296 1.148273 TAGGCATGCGGGTTGATCC 59.852 57.895 12.44 0.00 0.00 3.36
296 297 1.344953 TAGGCATGCGGGTTGATCCT 61.345 55.000 12.44 1.95 36.25 3.24
297 298 2.189499 GGCATGCGGGTTGATCCTC 61.189 63.158 12.44 0.00 36.25 3.71
298 299 1.153086 GCATGCGGGTTGATCCTCT 60.153 57.895 0.00 0.00 36.25 3.69
299 300 0.749454 GCATGCGGGTTGATCCTCTT 60.749 55.000 0.00 0.00 36.25 2.85
300 301 1.475034 GCATGCGGGTTGATCCTCTTA 60.475 52.381 0.00 0.00 36.25 2.10
301 302 2.487934 CATGCGGGTTGATCCTCTTAG 58.512 52.381 0.00 0.00 36.25 2.18
302 303 1.860641 TGCGGGTTGATCCTCTTAGA 58.139 50.000 0.00 0.00 36.25 2.10
303 304 1.480954 TGCGGGTTGATCCTCTTAGAC 59.519 52.381 0.00 0.00 36.25 2.59
304 305 1.480954 GCGGGTTGATCCTCTTAGACA 59.519 52.381 0.00 0.00 36.25 3.41
305 306 2.738964 GCGGGTTGATCCTCTTAGACAC 60.739 54.545 0.00 0.00 36.25 3.67
306 307 2.761208 CGGGTTGATCCTCTTAGACACT 59.239 50.000 0.00 0.00 36.25 3.55
307 308 3.952323 CGGGTTGATCCTCTTAGACACTA 59.048 47.826 0.00 0.00 36.25 2.74
308 309 4.202030 CGGGTTGATCCTCTTAGACACTAC 60.202 50.000 0.00 0.00 36.25 2.73
309 310 4.710375 GGGTTGATCCTCTTAGACACTACA 59.290 45.833 0.00 0.00 36.25 2.74
310 311 5.394333 GGGTTGATCCTCTTAGACACTACAC 60.394 48.000 0.00 0.00 36.25 2.90
311 312 5.185249 GGTTGATCCTCTTAGACACTACACA 59.815 44.000 0.00 0.00 0.00 3.72
312 313 6.295123 GGTTGATCCTCTTAGACACTACACAA 60.295 42.308 0.00 0.00 0.00 3.33
313 314 6.911250 TGATCCTCTTAGACACTACACAAA 57.089 37.500 0.00 0.00 0.00 2.83
314 315 7.297936 TGATCCTCTTAGACACTACACAAAA 57.702 36.000 0.00 0.00 0.00 2.44
315 316 7.152645 TGATCCTCTTAGACACTACACAAAAC 58.847 38.462 0.00 0.00 0.00 2.43
316 317 5.526115 TCCTCTTAGACACTACACAAAACG 58.474 41.667 0.00 0.00 0.00 3.60
317 318 5.068198 TCCTCTTAGACACTACACAAAACGT 59.932 40.000 0.00 0.00 0.00 3.99
318 319 6.262944 TCCTCTTAGACACTACACAAAACGTA 59.737 38.462 0.00 0.00 0.00 3.57
319 320 7.040201 TCCTCTTAGACACTACACAAAACGTAT 60.040 37.037 0.00 0.00 0.00 3.06
320 321 7.061905 CCTCTTAGACACTACACAAAACGTATG 59.938 40.741 0.00 0.00 0.00 2.39
321 322 6.864685 TCTTAGACACTACACAAAACGTATGG 59.135 38.462 6.27 0.00 0.00 2.74
322 323 4.312443 AGACACTACACAAAACGTATGGG 58.688 43.478 2.20 2.20 0.00 4.00
323 324 3.404899 ACACTACACAAAACGTATGGGG 58.595 45.455 8.23 2.14 0.00 4.96
324 325 3.181452 ACACTACACAAAACGTATGGGGT 60.181 43.478 8.23 7.11 0.00 4.95
325 326 3.434299 CACTACACAAAACGTATGGGGTC 59.566 47.826 8.23 0.00 0.00 4.46
326 327 1.900245 ACACAAAACGTATGGGGTCC 58.100 50.000 8.23 0.00 0.00 4.46
327 328 1.143277 ACACAAAACGTATGGGGTCCA 59.857 47.619 8.23 0.00 38.19 4.02
328 329 2.231529 CACAAAACGTATGGGGTCCAA 58.768 47.619 6.27 0.00 36.95 3.53
329 330 2.823154 CACAAAACGTATGGGGTCCAAT 59.177 45.455 6.27 0.00 36.95 3.16
330 331 2.823154 ACAAAACGTATGGGGTCCAATG 59.177 45.455 6.27 0.00 36.95 2.82
331 332 2.137810 AAACGTATGGGGTCCAATGG 57.862 50.000 0.00 0.00 36.95 3.16
332 333 0.395173 AACGTATGGGGTCCAATGGC 60.395 55.000 0.00 0.00 36.95 4.40
333 334 1.225983 CGTATGGGGTCCAATGGCA 59.774 57.895 0.00 0.00 36.95 4.92
334 335 0.395036 CGTATGGGGTCCAATGGCAA 60.395 55.000 0.00 0.00 36.95 4.52
335 336 1.111277 GTATGGGGTCCAATGGCAAC 58.889 55.000 0.00 0.00 36.95 4.17
336 337 1.006813 TATGGGGTCCAATGGCAACT 58.993 50.000 0.00 0.00 36.95 3.16
337 338 1.006813 ATGGGGTCCAATGGCAACTA 58.993 50.000 0.00 0.00 36.95 2.24
338 339 1.006813 TGGGGTCCAATGGCAACTAT 58.993 50.000 0.00 0.00 37.61 2.12
339 340 1.341877 TGGGGTCCAATGGCAACTATG 60.342 52.381 0.00 0.00 37.61 2.23
340 341 1.064017 GGGGTCCAATGGCAACTATGA 60.064 52.381 0.00 0.00 37.61 2.15
341 342 2.424812 GGGGTCCAATGGCAACTATGAT 60.425 50.000 0.00 0.00 37.61 2.45
342 343 2.624838 GGGTCCAATGGCAACTATGATG 59.375 50.000 0.00 0.00 37.61 3.07
343 344 3.554934 GGTCCAATGGCAACTATGATGA 58.445 45.455 0.00 0.00 37.61 2.92
344 345 3.953612 GGTCCAATGGCAACTATGATGAA 59.046 43.478 0.00 0.00 37.61 2.57
345 346 4.586001 GGTCCAATGGCAACTATGATGAAT 59.414 41.667 0.00 0.00 37.61 2.57
346 347 5.508489 GGTCCAATGGCAACTATGATGAATG 60.508 44.000 0.00 0.00 37.61 2.67
347 348 5.300034 GTCCAATGGCAACTATGATGAATGA 59.700 40.000 0.00 0.00 37.61 2.57
348 349 6.015688 GTCCAATGGCAACTATGATGAATGAT 60.016 38.462 0.00 0.00 37.61 2.45
349 350 6.015772 TCCAATGGCAACTATGATGAATGATG 60.016 38.462 0.00 0.00 37.61 3.07
350 351 6.015772 CCAATGGCAACTATGATGAATGATGA 60.016 38.462 0.00 0.00 37.61 2.92
351 352 7.309805 CCAATGGCAACTATGATGAATGATGAT 60.310 37.037 0.00 0.00 37.61 2.45
352 353 7.776618 ATGGCAACTATGATGAATGATGATT 57.223 32.000 0.00 0.00 37.61 2.57
353 354 6.977213 TGGCAACTATGATGAATGATGATTG 58.023 36.000 0.00 0.00 37.61 2.67
354 355 6.015772 TGGCAACTATGATGAATGATGATTGG 60.016 38.462 0.00 0.00 37.61 3.16
355 356 6.208007 GGCAACTATGATGAATGATGATTGGA 59.792 38.462 0.00 0.00 0.00 3.53
356 357 7.306213 GCAACTATGATGAATGATGATTGGAG 58.694 38.462 0.00 0.00 0.00 3.86
357 358 7.575155 GCAACTATGATGAATGATGATTGGAGG 60.575 40.741 0.00 0.00 0.00 4.30
358 359 7.087895 ACTATGATGAATGATGATTGGAGGT 57.912 36.000 0.00 0.00 0.00 3.85
359 360 7.166851 ACTATGATGAATGATGATTGGAGGTC 58.833 38.462 0.00 0.00 0.00 3.85
360 361 5.376756 TGATGAATGATGATTGGAGGTCA 57.623 39.130 0.00 0.00 0.00 4.02
361 362 5.948842 TGATGAATGATGATTGGAGGTCAT 58.051 37.500 0.00 0.00 38.94 3.06
362 363 5.768164 TGATGAATGATGATTGGAGGTCATG 59.232 40.000 0.00 0.00 36.49 3.07
363 364 5.376756 TGAATGATGATTGGAGGTCATGA 57.623 39.130 0.00 0.00 36.49 3.07
364 365 5.948842 TGAATGATGATTGGAGGTCATGAT 58.051 37.500 0.00 0.00 36.49 2.45
365 366 6.002082 TGAATGATGATTGGAGGTCATGATC 58.998 40.000 0.00 0.00 36.49 2.92
366 367 3.999046 TGATGATTGGAGGTCATGATCG 58.001 45.455 0.00 0.00 36.49 3.69
367 368 2.245159 TGATTGGAGGTCATGATCGC 57.755 50.000 0.31 0.31 0.00 4.58
368 369 1.764723 TGATTGGAGGTCATGATCGCT 59.235 47.619 9.69 0.00 0.00 4.93
369 370 2.171237 TGATTGGAGGTCATGATCGCTT 59.829 45.455 9.69 0.00 0.00 4.68
370 371 2.028420 TTGGAGGTCATGATCGCTTG 57.972 50.000 9.69 0.00 0.00 4.01
371 372 0.178767 TGGAGGTCATGATCGCTTGG 59.821 55.000 9.69 0.00 0.00 3.61
372 373 0.533755 GGAGGTCATGATCGCTTGGG 60.534 60.000 9.69 0.00 0.00 4.12
373 374 0.179000 GAGGTCATGATCGCTTGGGT 59.821 55.000 1.99 0.00 0.00 4.51
374 375 0.179000 AGGTCATGATCGCTTGGGTC 59.821 55.000 0.00 0.00 0.00 4.46
375 376 0.179000 GGTCATGATCGCTTGGGTCT 59.821 55.000 0.00 0.00 0.00 3.85
376 377 1.407437 GGTCATGATCGCTTGGGTCTT 60.407 52.381 0.00 0.00 0.00 3.01
377 378 1.667724 GTCATGATCGCTTGGGTCTTG 59.332 52.381 0.00 0.00 0.00 3.02
378 379 0.379669 CATGATCGCTTGGGTCTTGC 59.620 55.000 0.00 0.00 0.00 4.01
382 383 2.252260 CGCTTGGGTCTTGCGTTG 59.748 61.111 0.00 0.00 44.00 4.10
383 384 2.644992 GCTTGGGTCTTGCGTTGG 59.355 61.111 0.00 0.00 0.00 3.77
384 385 2.193536 GCTTGGGTCTTGCGTTGGT 61.194 57.895 0.00 0.00 0.00 3.67
385 386 1.654220 CTTGGGTCTTGCGTTGGTG 59.346 57.895 0.00 0.00 0.00 4.17
386 387 1.795170 CTTGGGTCTTGCGTTGGTGG 61.795 60.000 0.00 0.00 0.00 4.61
387 388 3.670377 GGGTCTTGCGTTGGTGGC 61.670 66.667 0.00 0.00 0.00 5.01
388 389 2.594592 GGTCTTGCGTTGGTGGCT 60.595 61.111 0.00 0.00 0.00 4.75
389 390 2.193536 GGTCTTGCGTTGGTGGCTT 61.194 57.895 0.00 0.00 0.00 4.35
390 391 1.008538 GTCTTGCGTTGGTGGCTTG 60.009 57.895 0.00 0.00 0.00 4.01
391 392 2.355009 CTTGCGTTGGTGGCTTGC 60.355 61.111 0.00 0.00 0.00 4.01
392 393 2.832661 TTGCGTTGGTGGCTTGCT 60.833 55.556 0.00 0.00 0.00 3.91
393 394 2.354074 CTTGCGTTGGTGGCTTGCTT 62.354 55.000 0.00 0.00 0.00 3.91
394 395 2.355009 GCGTTGGTGGCTTGCTTG 60.355 61.111 0.00 0.00 0.00 4.01
395 396 2.336088 CGTTGGTGGCTTGCTTGG 59.664 61.111 0.00 0.00 0.00 3.61
396 397 2.029518 GTTGGTGGCTTGCTTGGC 59.970 61.111 0.00 0.00 0.00 4.52
397 398 3.604667 TTGGTGGCTTGCTTGGCG 61.605 61.111 0.00 0.00 35.06 5.69
398 399 4.892965 TGGTGGCTTGCTTGGCGT 62.893 61.111 0.00 0.00 35.06 5.68
399 400 3.605664 GGTGGCTTGCTTGGCGTT 61.606 61.111 0.00 0.00 35.06 4.84
400 401 2.417097 GTGGCTTGCTTGGCGTTT 59.583 55.556 0.00 0.00 35.06 3.60
401 402 1.950630 GTGGCTTGCTTGGCGTTTG 60.951 57.895 0.00 0.00 35.06 2.93
402 403 3.037833 GGCTTGCTTGGCGTTTGC 61.038 61.111 0.00 0.00 41.71 3.68
403 404 3.397317 GCTTGCTTGGCGTTTGCG 61.397 61.111 0.00 0.00 44.10 4.85
404 405 2.026014 CTTGCTTGGCGTTTGCGT 59.974 55.556 0.00 0.00 44.10 5.24
405 406 2.278466 TTGCTTGGCGTTTGCGTG 60.278 55.556 0.00 0.00 44.10 5.34
406 407 4.921847 TGCTTGGCGTTTGCGTGC 62.922 61.111 0.00 0.00 44.10 5.34
408 409 4.605967 CTTGGCGTTTGCGTGCGT 62.606 61.111 0.00 0.00 44.10 5.24
409 410 4.896028 TTGGCGTTTGCGTGCGTG 62.896 61.111 0.00 0.00 44.10 5.34
412 413 4.293626 GCGTTTGCGTGCGTGTCT 62.294 61.111 0.00 0.00 40.81 3.41
413 414 2.128128 CGTTTGCGTGCGTGTCTC 60.128 61.111 0.00 0.00 0.00 3.36
414 415 2.248431 GTTTGCGTGCGTGTCTCC 59.752 61.111 0.00 0.00 0.00 3.71
415 416 2.970324 TTTGCGTGCGTGTCTCCC 60.970 61.111 0.00 0.00 0.00 4.30
419 420 4.337060 CGTGCGTGTCTCCCGTGA 62.337 66.667 0.00 0.00 0.00 4.35
420 421 2.261671 GTGCGTGTCTCCCGTGAT 59.738 61.111 0.00 0.00 0.00 3.06
421 422 1.805945 GTGCGTGTCTCCCGTGATC 60.806 63.158 0.00 0.00 0.00 2.92
422 423 1.977009 TGCGTGTCTCCCGTGATCT 60.977 57.895 0.00 0.00 0.00 2.75
423 424 1.226717 GCGTGTCTCCCGTGATCTC 60.227 63.158 0.00 0.00 0.00 2.75
424 425 1.062685 CGTGTCTCCCGTGATCTCG 59.937 63.158 10.15 10.15 0.00 4.04
425 426 1.366854 CGTGTCTCCCGTGATCTCGA 61.367 60.000 18.20 0.00 0.00 4.04
426 427 0.099082 GTGTCTCCCGTGATCTCGAC 59.901 60.000 18.20 8.92 0.00 4.20
427 428 1.352404 GTCTCCCGTGATCTCGACG 59.648 63.158 18.20 7.87 36.56 5.12
428 429 1.088340 GTCTCCCGTGATCTCGACGA 61.088 60.000 18.20 11.60 39.21 4.20
429 430 0.810426 TCTCCCGTGATCTCGACGAG 60.810 60.000 18.91 18.91 39.21 4.18
430 431 0.810426 CTCCCGTGATCTCGACGAGA 60.810 60.000 28.36 28.36 43.20 4.04
446 447 0.038343 GAGATCTCGATGAGGCCAGC 60.038 60.000 7.04 0.00 0.00 4.85
447 448 1.005156 GATCTCGATGAGGCCAGCC 60.005 63.158 5.01 0.00 0.00 4.85
448 449 2.762006 GATCTCGATGAGGCCAGCCG 62.762 65.000 5.01 2.65 41.95 5.52
449 450 4.598894 CTCGATGAGGCCAGCCGG 62.599 72.222 5.01 0.00 41.95 6.13
466 467 4.222847 GGGACCTTAGGCGCCGAG 62.223 72.222 23.20 22.22 0.00 4.63
483 484 3.805267 GCTGATGAGCCTCGGTTG 58.195 61.111 0.00 0.00 39.57 3.77
484 485 2.467826 GCTGATGAGCCTCGGTTGC 61.468 63.158 0.00 0.00 39.57 4.17
485 486 2.125552 TGATGAGCCTCGGTTGCG 60.126 61.111 0.00 0.00 0.00 4.85
486 487 2.125512 GATGAGCCTCGGTTGCGT 60.126 61.111 0.00 0.00 0.00 5.24
487 488 2.434884 ATGAGCCTCGGTTGCGTG 60.435 61.111 0.00 0.00 0.00 5.34
488 489 3.240134 ATGAGCCTCGGTTGCGTGT 62.240 57.895 0.00 0.00 0.00 4.49
489 490 3.112709 GAGCCTCGGTTGCGTGTC 61.113 66.667 0.00 0.00 0.00 3.67
492 493 3.103911 CCTCGGTTGCGTGTCGTC 61.104 66.667 0.00 0.00 0.00 4.20
493 494 3.458579 CTCGGTTGCGTGTCGTCG 61.459 66.667 0.00 0.00 0.00 5.12
494 495 4.986587 TCGGTTGCGTGTCGTCGG 62.987 66.667 0.00 0.00 0.00 4.79
501 502 3.740397 CGTGTCGTCGGCCACCTA 61.740 66.667 2.24 0.00 0.00 3.08
502 503 2.181021 GTGTCGTCGGCCACCTAG 59.819 66.667 2.24 0.00 0.00 3.02
503 504 2.282674 TGTCGTCGGCCACCTAGT 60.283 61.111 2.24 0.00 0.00 2.57
504 505 2.338015 TGTCGTCGGCCACCTAGTC 61.338 63.158 2.24 0.00 0.00 2.59
505 506 3.129502 TCGTCGGCCACCTAGTCG 61.130 66.667 2.24 0.00 0.00 4.18
506 507 3.437795 CGTCGGCCACCTAGTCGT 61.438 66.667 2.24 0.00 0.00 4.34
507 508 2.968206 GTCGGCCACCTAGTCGTT 59.032 61.111 2.24 0.00 0.00 3.85
508 509 1.445582 GTCGGCCACCTAGTCGTTG 60.446 63.158 2.24 0.00 0.00 4.10
509 510 1.904865 TCGGCCACCTAGTCGTTGT 60.905 57.895 2.24 0.00 0.00 3.32
510 511 1.736645 CGGCCACCTAGTCGTTGTG 60.737 63.158 2.24 0.00 0.00 3.33
511 512 2.033194 GGCCACCTAGTCGTTGTGC 61.033 63.158 0.00 0.00 0.00 4.57
512 513 2.380410 GCCACCTAGTCGTTGTGCG 61.380 63.158 0.00 0.00 43.01 5.34
569 570 2.416747 CAGCCGACAGAGACAAAATGA 58.583 47.619 0.00 0.00 0.00 2.57
575 576 3.489416 CGACAGAGACAAAATGACAACGA 59.511 43.478 0.00 0.00 0.00 3.85
581 582 7.080099 CAGAGACAAAATGACAACGATTCAAT 58.920 34.615 0.00 0.00 0.00 2.57
629 654 1.911057 CAGATCATGCCATGCCATCT 58.089 50.000 0.00 1.43 0.00 2.90
630 655 2.239400 CAGATCATGCCATGCCATCTT 58.761 47.619 6.23 0.00 0.00 2.40
635 667 5.364446 AGATCATGCCATGCCATCTTTTAAA 59.636 36.000 0.00 0.00 0.00 1.52
636 668 5.013568 TCATGCCATGCCATCTTTTAAAG 57.986 39.130 0.00 0.00 0.00 1.85
641 673 5.105392 TGCCATGCCATCTTTTAAAGTTAGG 60.105 40.000 4.53 6.55 0.00 2.69
650 682 7.384932 CCATCTTTTAAAGTTAGGCAAACAAGG 59.615 37.037 4.53 0.00 40.83 3.61
684 719 5.381174 AATCATATGCCATCCGTCAAATG 57.619 39.130 0.00 0.00 0.00 2.32
693 731 4.024048 GCCATCCGTCAAATGAATAATCGT 60.024 41.667 0.00 0.00 0.00 3.73
709 747 1.856802 TCGTTGCCATCTCATCATCG 58.143 50.000 0.00 0.00 0.00 3.84
719 761 3.772060 TCTCATCATCGTCTGACACTG 57.228 47.619 8.73 4.58 36.48 3.66
721 763 0.919300 CATCATCGTCTGACACTGCG 59.081 55.000 8.73 0.00 36.48 5.18
729 773 2.032924 CGTCTGACACTGCGTCCATATA 59.967 50.000 8.73 0.00 44.71 0.86
737 785 3.928992 CACTGCGTCCATATACATCCATC 59.071 47.826 0.00 0.00 0.00 3.51
742 790 4.363138 CGTCCATATACATCCATCCATCG 58.637 47.826 0.00 0.00 0.00 3.84
750 798 1.130054 ATCCATCCATCGGACCCCAG 61.130 60.000 0.00 0.00 34.69 4.45
756 804 1.062428 TCCATCGGACCCCAGATAAGT 60.062 52.381 0.00 0.00 0.00 2.24
761 809 5.433526 CATCGGACCCCAGATAAGTTTTTA 58.566 41.667 0.00 0.00 0.00 1.52
792 842 9.707957 AAGAGGATAAATAAACAGAGAGAGAGA 57.292 33.333 0.00 0.00 0.00 3.10
876 926 0.574922 CGTTTGAAAACCGCTTTGCC 59.425 50.000 0.49 0.00 35.51 4.52
888 938 4.715523 TTTGCCCCTTCCGCTCCG 62.716 66.667 0.00 0.00 0.00 4.63
936 993 4.016706 CCACGACCCGGCTTTCCT 62.017 66.667 0.00 0.00 0.00 3.36
947 1006 1.135689 CGGCTTTCCTTTCCACATTCG 60.136 52.381 0.00 0.00 0.00 3.34
948 1007 1.886542 GGCTTTCCTTTCCACATTCGT 59.113 47.619 0.00 0.00 0.00 3.85
949 1008 2.296190 GGCTTTCCTTTCCACATTCGTT 59.704 45.455 0.00 0.00 0.00 3.85
950 1009 3.565516 GCTTTCCTTTCCACATTCGTTC 58.434 45.455 0.00 0.00 0.00 3.95
951 1010 3.810373 CTTTCCTTTCCACATTCGTTCG 58.190 45.455 0.00 0.00 0.00 3.95
952 1011 2.823924 TCCTTTCCACATTCGTTCGA 57.176 45.000 0.00 0.00 0.00 3.71
953 1012 2.409975 TCCTTTCCACATTCGTTCGAC 58.590 47.619 0.00 0.00 0.00 4.20
954 1013 2.139917 CCTTTCCACATTCGTTCGACA 58.860 47.619 0.00 0.00 0.00 4.35
960 1019 0.365523 ACATTCGTTCGACATTCGCG 59.634 50.000 0.00 0.00 40.21 5.87
1230 1295 4.430765 ACGGCGGTGGTCGATGAC 62.431 66.667 13.24 0.00 46.20 3.06
1248 1316 4.547905 GAGATCGTCGCCGCGGAA 62.548 66.667 33.48 13.91 0.00 4.30
1262 1330 3.855853 GGAAGAGGAGGGCGAGCC 61.856 72.222 5.37 5.37 0.00 4.70
1263 1331 4.214327 GAAGAGGAGGGCGAGCCG 62.214 72.222 8.14 0.00 36.85 5.52
1291 1365 4.463879 CGGGTGCCTCTGCCTCAG 62.464 72.222 0.00 0.00 36.33 3.35
1292 1366 4.106925 GGGTGCCTCTGCCTCAGG 62.107 72.222 0.00 0.00 36.33 3.86
1293 1367 3.325753 GGTGCCTCTGCCTCAGGT 61.326 66.667 0.00 0.00 36.33 4.00
1294 1368 1.990060 GGTGCCTCTGCCTCAGGTA 60.990 63.158 0.00 0.00 36.33 3.08
1295 1369 1.219393 GTGCCTCTGCCTCAGGTAC 59.781 63.158 0.00 0.00 39.16 3.34
1296 1370 2.351244 TGCCTCTGCCTCAGGTACG 61.351 63.158 0.00 0.00 36.33 3.67
1297 1371 2.352032 GCCTCTGCCTCAGGTACGT 61.352 63.158 0.00 0.00 32.98 3.57
1298 1372 1.889530 GCCTCTGCCTCAGGTACGTT 61.890 60.000 0.00 0.00 32.98 3.99
1306 1380 1.335324 CCTCAGGTACGTTCGTTCGTT 60.335 52.381 11.84 0.00 43.80 3.85
1323 1397 1.719246 CGTTCGAAATCTCACTTCGCA 59.281 47.619 0.00 0.00 44.14 5.10
1326 1400 3.842732 TCGAAATCTCACTTCGCAGTA 57.157 42.857 0.25 0.00 44.14 2.74
1343 1417 3.243569 GCAGTAGTATTCTGGCAGTCGAT 60.244 47.826 15.27 9.78 33.98 3.59
1351 1425 3.793797 TCTGGCAGTCGATCGAATTTA 57.206 42.857 21.31 6.20 0.00 1.40
1357 1431 4.092968 GGCAGTCGATCGAATTTAGTTTGT 59.907 41.667 21.31 0.00 0.00 2.83
1362 1436 5.722141 GTCGATCGAATTTAGTTTGTTGTCG 59.278 40.000 21.31 0.00 0.00 4.35
1366 1440 4.084223 TCGAATTTAGTTTGTTGTCGAGCC 60.084 41.667 0.00 0.00 32.72 4.70
1372 1446 1.155424 TTTGTTGTCGAGCCCGTCAC 61.155 55.000 0.00 0.00 33.93 3.67
1375 1449 2.847754 TTGTCGAGCCCGTCACGAA 61.848 57.895 0.00 0.00 39.36 3.85
1381 1455 0.872388 GAGCCCGTCACGAACAATTT 59.128 50.000 0.00 0.00 0.00 1.82
1383 1457 1.265905 AGCCCGTCACGAACAATTTTC 59.734 47.619 0.00 0.00 0.00 2.29
1509 1598 0.251297 CAACAAGATGGCCAGGGTGA 60.251 55.000 13.05 0.00 0.00 4.02
1957 2055 2.576053 CGACGACGACGACCATGG 60.576 66.667 15.32 11.19 42.66 3.66
1958 2056 2.879462 GACGACGACGACCATGGC 60.879 66.667 13.04 3.65 42.66 4.40
2197 2304 4.980805 CCACGACCACCACCACGG 62.981 72.222 0.00 0.00 42.50 4.94
2249 2361 1.290324 CACCTCACCTCACCTCACG 59.710 63.158 0.00 0.00 0.00 4.35
2289 2406 4.057428 GTGGAGGCGCTCGTGACT 62.057 66.667 7.64 0.00 0.00 3.41
2290 2407 4.056125 TGGAGGCGCTCGTGACTG 62.056 66.667 7.64 0.00 0.00 3.51
2292 2409 4.427661 GAGGCGCTCGTGACTGCT 62.428 66.667 7.64 0.00 0.00 4.24
2293 2410 4.427661 AGGCGCTCGTGACTGCTC 62.428 66.667 7.64 0.00 0.00 4.26
2294 2411 4.427661 GGCGCTCGTGACTGCTCT 62.428 66.667 7.64 0.00 0.00 4.09
2295 2412 2.431601 GCGCTCGTGACTGCTCTT 60.432 61.111 0.00 0.00 0.00 2.85
2296 2413 2.440569 GCGCTCGTGACTGCTCTTC 61.441 63.158 0.00 0.00 0.00 2.87
2297 2414 1.803519 CGCTCGTGACTGCTCTTCC 60.804 63.158 0.00 0.00 0.00 3.46
2298 2415 1.290324 GCTCGTGACTGCTCTTCCA 59.710 57.895 0.00 0.00 0.00 3.53
2299 2416 1.011451 GCTCGTGACTGCTCTTCCAC 61.011 60.000 0.00 0.00 0.00 4.02
2300 2417 0.389166 CTCGTGACTGCTCTTCCACC 60.389 60.000 0.00 0.00 0.00 4.61
2301 2418 1.112916 TCGTGACTGCTCTTCCACCA 61.113 55.000 0.00 0.00 0.00 4.17
2310 2428 1.207329 GCTCTTCCACCACCGAGTAAT 59.793 52.381 0.00 0.00 0.00 1.89
2316 2434 3.170717 TCCACCACCGAGTAATTCTCTT 58.829 45.455 0.00 0.00 40.75 2.85
2337 2458 3.045634 TGACTGTTCCTTCTCCCTGAAA 58.954 45.455 0.00 0.00 33.79 2.69
2338 2459 3.181454 TGACTGTTCCTTCTCCCTGAAAC 60.181 47.826 0.00 0.00 33.79 2.78
2369 2490 3.005554 AGATGAGGAATTTCGTGCAGTG 58.994 45.455 0.00 0.00 0.00 3.66
2380 2501 0.929824 CGTGCAGTGCTTTTTGTCGG 60.930 55.000 17.60 0.00 0.00 4.79
2422 2544 6.347160 CCGTGCATTACATGATTACAGATGAG 60.347 42.308 0.00 0.00 37.49 2.90
2568 2996 1.980052 CCGCCAGGGTTTAGAGTCA 59.020 57.895 0.00 0.00 0.00 3.41
2674 3102 6.379133 ACTGATTTTGTGATCCATGTAATGCT 59.621 34.615 0.00 0.00 44.97 3.79
2676 3104 7.706159 TGATTTTGTGATCCATGTAATGCTAC 58.294 34.615 0.00 0.00 44.97 3.58
2710 3138 6.703165 GTGTCTGTTCATGCATATCACTCATA 59.297 38.462 0.00 0.00 0.00 2.15
2770 3202 8.209584 ACTCATATGCAGTTTCAGAATCAGTAT 58.790 33.333 0.00 0.00 0.00 2.12
2791 3223 1.470098 AGCAATTTTACAGCCTGCTCG 59.530 47.619 0.00 0.00 39.04 5.03
2805 3237 3.033184 CTCGCAGTGCTTTTGCCA 58.967 55.556 14.33 0.00 46.87 4.92
2819 3251 5.751028 TGCTTTTGCCAATTACACTTTACAC 59.249 36.000 0.00 0.00 46.87 2.90
2823 3255 5.682943 TGCCAATTACACTTTACACTGAC 57.317 39.130 0.00 0.00 0.00 3.51
2835 3267 5.632347 ACTTTACACTGACGGTTTATTCGAG 59.368 40.000 0.00 0.00 0.00 4.04
2855 3287 7.416154 TCGAGAAATCGCCGATATTTTTATT 57.584 32.000 0.00 0.00 0.00 1.40
2857 3289 8.644619 TCGAGAAATCGCCGATATTTTTATTAG 58.355 33.333 0.00 0.00 0.00 1.73
2883 3315 4.582701 ATTCGTTGGAAATGACTTTGCA 57.417 36.364 0.00 0.00 42.51 4.08
2888 3320 4.060205 GTTGGAAATGACTTTGCAGCATT 58.940 39.130 0.00 0.00 42.61 3.56
2903 3335 4.398988 TGCAGCATTTCGTATTCTGGAATT 59.601 37.500 0.00 0.00 32.50 2.17
2904 3336 4.736793 GCAGCATTTCGTATTCTGGAATTG 59.263 41.667 1.01 0.00 32.50 2.32
2911 3343 8.798153 CATTTCGTATTCTGGAATTGCTAAAAC 58.202 33.333 0.00 0.00 32.50 2.43
2943 3375 9.191995 CGGCTGTTTCTTTTAATTTCAGTTAAT 57.808 29.630 0.00 0.00 0.00 1.40
2975 3415 4.618920 AACCGGTCACTTCTATGAAGTT 57.381 40.909 8.04 0.00 0.00 2.66
3001 3441 9.887406 TGTGTTTTAGTAACTATTTTTGCTAGC 57.113 29.630 8.10 8.10 0.00 3.42
3016 3456 4.063998 TGCTAGCATCTGTTATCTGGTG 57.936 45.455 14.93 0.00 0.00 4.17
3018 3458 4.080919 TGCTAGCATCTGTTATCTGGTGTT 60.081 41.667 14.93 0.00 0.00 3.32
3024 3464 8.438676 AGCATCTGTTATCTGGTGTTTTATAC 57.561 34.615 0.00 0.00 0.00 1.47
3058 3498 2.487762 CGAGTGCTCTTTGCCCATTTTA 59.512 45.455 0.00 0.00 42.00 1.52
3071 3511 5.930135 TGCCCATTTTAAAACTGCCTTTAA 58.070 33.333 1.97 0.00 0.00 1.52
3083 3523 4.007659 ACTGCCTTTAACAATAGAACGGG 58.992 43.478 0.00 0.00 0.00 5.28
3118 3558 6.594744 ACAGGATTTTCTTTTGGCATTTTCT 58.405 32.000 0.00 0.00 0.00 2.52
3126 3566 8.432110 TTTCTTTTGGCATTTTCTTTTCCTAC 57.568 30.769 0.00 0.00 0.00 3.18
3129 3569 4.519540 TGGCATTTTCTTTTCCTACTGC 57.480 40.909 0.00 0.00 0.00 4.40
3133 3573 4.321527 GCATTTTCTTTTCCTACTGCTGCT 60.322 41.667 0.00 0.00 0.00 4.24
3149 3589 2.739932 GCTGCTAGCTCTTCGGATCAAA 60.740 50.000 17.23 0.00 38.45 2.69
3170 3610 8.126871 TCAAAGGATTGAGATTACGATTTACG 57.873 34.615 0.00 0.00 40.59 3.18
3186 3626 8.193250 ACGATTTACGAGTGCTTTTATGTATT 57.807 30.769 0.00 0.00 45.77 1.89
3231 3680 4.937015 CCAAATTTCTGCCAAATGGTTAGG 59.063 41.667 0.71 0.00 37.57 2.69
3260 3717 6.410540 ACAAAGGTTTCTTGTTTTTGGCATA 58.589 32.000 0.00 0.00 34.07 3.14
3261 3718 6.881602 ACAAAGGTTTCTTGTTTTTGGCATAA 59.118 30.769 0.00 0.00 34.07 1.90
3290 3747 1.202794 CCCTTTTGTGCCTGCCAAAAT 60.203 47.619 14.50 0.00 40.06 1.82
3291 3748 2.038295 CCCTTTTGTGCCTGCCAAAATA 59.962 45.455 14.50 0.89 40.06 1.40
3321 3779 3.482436 TCCACAATGTGAGTTTGGTACC 58.518 45.455 15.91 4.43 35.23 3.34
3332 3790 2.023791 AGTTTGGTACCCCCTTTTGTGT 60.024 45.455 10.07 0.00 0.00 3.72
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 6.564499 GCCATTTTGAATAACTGCAACTGTTG 60.564 38.462 15.98 15.98 0.00 3.33
6 7 5.466393 GCCATTTTGAATAACTGCAACTGTT 59.534 36.000 0.00 0.00 0.00 3.16
7 8 4.990426 GCCATTTTGAATAACTGCAACTGT 59.010 37.500 0.00 0.00 0.00 3.55
8 9 4.989797 TGCCATTTTGAATAACTGCAACTG 59.010 37.500 0.00 0.00 0.00 3.16
9 10 5.212532 TGCCATTTTGAATAACTGCAACT 57.787 34.783 0.00 0.00 0.00 3.16
10 11 5.870978 AGATGCCATTTTGAATAACTGCAAC 59.129 36.000 0.00 0.00 0.00 4.17
11 12 5.870433 CAGATGCCATTTTGAATAACTGCAA 59.130 36.000 0.00 0.00 0.00 4.08
12 13 5.412640 CAGATGCCATTTTGAATAACTGCA 58.587 37.500 0.00 0.00 0.00 4.41
13 14 4.807304 CCAGATGCCATTTTGAATAACTGC 59.193 41.667 0.00 0.00 0.00 4.40
14 15 4.807304 GCCAGATGCCATTTTGAATAACTG 59.193 41.667 0.00 0.00 0.00 3.16
15 16 4.467082 TGCCAGATGCCATTTTGAATAACT 59.533 37.500 0.00 0.00 40.16 2.24
16 17 4.757594 TGCCAGATGCCATTTTGAATAAC 58.242 39.130 0.00 0.00 40.16 1.89
17 18 4.467082 ACTGCCAGATGCCATTTTGAATAA 59.533 37.500 0.00 0.00 40.16 1.40
18 19 4.025360 ACTGCCAGATGCCATTTTGAATA 58.975 39.130 0.00 0.00 40.16 1.75
19 20 2.835764 ACTGCCAGATGCCATTTTGAAT 59.164 40.909 0.00 0.00 40.16 2.57
20 21 2.250031 ACTGCCAGATGCCATTTTGAA 58.750 42.857 0.00 0.00 40.16 2.69
21 22 1.927487 ACTGCCAGATGCCATTTTGA 58.073 45.000 0.00 0.00 40.16 2.69
22 23 2.028839 TCAACTGCCAGATGCCATTTTG 60.029 45.455 0.00 0.00 40.16 2.44
23 24 2.028748 GTCAACTGCCAGATGCCATTTT 60.029 45.455 0.00 0.00 40.16 1.82
24 25 1.547372 GTCAACTGCCAGATGCCATTT 59.453 47.619 0.00 0.00 40.16 2.32
25 26 1.180029 GTCAACTGCCAGATGCCATT 58.820 50.000 0.00 0.00 40.16 3.16
26 27 0.682209 GGTCAACTGCCAGATGCCAT 60.682 55.000 0.00 0.00 40.16 4.40
27 28 1.303561 GGTCAACTGCCAGATGCCA 60.304 57.895 0.00 0.00 40.16 4.92
28 29 1.001641 AGGTCAACTGCCAGATGCC 60.002 57.895 0.00 3.03 40.16 4.40
29 30 2.177950 CAGGTCAACTGCCAGATGC 58.822 57.895 0.00 0.00 40.97 3.91
30 31 4.235940 CATCTCAGGTCAACTGCCAGATG 61.236 52.174 6.94 6.94 44.86 2.90
38 39 3.805108 GCAGTTGTCATCTCAGGTCAACT 60.805 47.826 0.00 0.00 45.93 3.16
39 40 2.481952 GCAGTTGTCATCTCAGGTCAAC 59.518 50.000 0.00 0.00 38.69 3.18
40 41 2.104622 TGCAGTTGTCATCTCAGGTCAA 59.895 45.455 0.00 0.00 0.00 3.18
41 42 1.693606 TGCAGTTGTCATCTCAGGTCA 59.306 47.619 0.00 0.00 0.00 4.02
42 43 2.289320 ACTGCAGTTGTCATCTCAGGTC 60.289 50.000 15.25 0.00 0.00 3.85
43 44 1.696336 ACTGCAGTTGTCATCTCAGGT 59.304 47.619 15.25 0.00 0.00 4.00
44 45 2.469274 ACTGCAGTTGTCATCTCAGG 57.531 50.000 15.25 0.00 0.00 3.86
59 60 3.568538 CTGAACTACAATTGCCAACTGC 58.431 45.455 5.05 0.00 41.77 4.40
60 61 3.568538 GCTGAACTACAATTGCCAACTG 58.431 45.455 5.05 0.00 0.00 3.16
61 62 2.226437 CGCTGAACTACAATTGCCAACT 59.774 45.455 5.05 0.00 0.00 3.16
62 63 2.225491 TCGCTGAACTACAATTGCCAAC 59.775 45.455 5.05 0.00 0.00 3.77
63 64 2.225491 GTCGCTGAACTACAATTGCCAA 59.775 45.455 5.05 0.00 0.00 4.52
64 65 1.804151 GTCGCTGAACTACAATTGCCA 59.196 47.619 5.05 0.00 0.00 4.92
65 66 1.804151 TGTCGCTGAACTACAATTGCC 59.196 47.619 5.05 0.00 0.00 4.52
66 67 3.419915 CATGTCGCTGAACTACAATTGC 58.580 45.455 5.05 0.00 0.00 3.56
67 68 3.728864 GCCATGTCGCTGAACTACAATTG 60.729 47.826 3.24 3.24 0.00 2.32
68 69 2.420022 GCCATGTCGCTGAACTACAATT 59.580 45.455 0.00 0.00 0.00 2.32
69 70 2.009774 GCCATGTCGCTGAACTACAAT 58.990 47.619 0.00 0.00 0.00 2.71
70 71 1.270571 TGCCATGTCGCTGAACTACAA 60.271 47.619 0.00 0.00 0.00 2.41
71 72 0.320050 TGCCATGTCGCTGAACTACA 59.680 50.000 0.00 0.00 0.00 2.74
72 73 1.438651 TTGCCATGTCGCTGAACTAC 58.561 50.000 0.00 0.00 0.00 2.73
73 74 2.401583 ATTGCCATGTCGCTGAACTA 57.598 45.000 0.00 0.00 0.00 2.24
74 75 1.200716 CAATTGCCATGTCGCTGAACT 59.799 47.619 0.00 0.00 0.00 3.01
75 76 1.621107 CAATTGCCATGTCGCTGAAC 58.379 50.000 0.00 0.00 0.00 3.18
76 77 0.109179 GCAATTGCCATGTCGCTGAA 60.109 50.000 20.06 0.00 34.31 3.02
77 78 1.242665 TGCAATTGCCATGTCGCTGA 61.243 50.000 26.94 1.64 41.18 4.26
78 79 0.800683 CTGCAATTGCCATGTCGCTG 60.801 55.000 26.94 0.45 41.18 5.18
79 80 1.246056 ACTGCAATTGCCATGTCGCT 61.246 50.000 26.94 0.00 41.18 4.93
80 81 0.388907 AACTGCAATTGCCATGTCGC 60.389 50.000 26.94 0.24 41.18 5.19
81 82 2.917701 TAACTGCAATTGCCATGTCG 57.082 45.000 26.94 10.84 41.18 4.35
82 83 3.364621 CGTTTAACTGCAATTGCCATGTC 59.635 43.478 26.94 10.64 41.18 3.06
83 84 3.316283 CGTTTAACTGCAATTGCCATGT 58.684 40.909 26.94 19.06 41.18 3.21
84 85 2.667481 CCGTTTAACTGCAATTGCCATG 59.333 45.455 26.94 18.45 41.18 3.66
85 86 2.560542 TCCGTTTAACTGCAATTGCCAT 59.439 40.909 26.94 15.21 41.18 4.40
86 87 1.957177 TCCGTTTAACTGCAATTGCCA 59.043 42.857 26.94 14.13 41.18 4.92
87 88 2.287909 TGTCCGTTTAACTGCAATTGCC 60.288 45.455 26.94 10.18 41.18 4.52
88 89 3.006659 TGTCCGTTTAACTGCAATTGC 57.993 42.857 23.69 23.69 42.50 3.56
89 90 5.218885 TCAATGTCCGTTTAACTGCAATTG 58.781 37.500 0.00 0.00 0.00 2.32
90 91 5.446143 TCAATGTCCGTTTAACTGCAATT 57.554 34.783 0.00 0.00 0.00 2.32
91 92 5.240623 TCTTCAATGTCCGTTTAACTGCAAT 59.759 36.000 0.00 0.00 0.00 3.56
92 93 4.576873 TCTTCAATGTCCGTTTAACTGCAA 59.423 37.500 0.00 0.00 0.00 4.08
93 94 4.130857 TCTTCAATGTCCGTTTAACTGCA 58.869 39.130 0.00 0.00 0.00 4.41
94 95 4.378459 CCTCTTCAATGTCCGTTTAACTGC 60.378 45.833 0.00 0.00 0.00 4.40
95 96 4.154195 CCCTCTTCAATGTCCGTTTAACTG 59.846 45.833 0.00 0.00 0.00 3.16
96 97 4.202430 ACCCTCTTCAATGTCCGTTTAACT 60.202 41.667 0.00 0.00 0.00 2.24
97 98 4.070009 ACCCTCTTCAATGTCCGTTTAAC 58.930 43.478 0.00 0.00 0.00 2.01
98 99 4.320870 GACCCTCTTCAATGTCCGTTTAA 58.679 43.478 0.00 0.00 0.00 1.52
99 100 3.307199 GGACCCTCTTCAATGTCCGTTTA 60.307 47.826 0.00 0.00 38.07 2.01
100 101 2.552373 GGACCCTCTTCAATGTCCGTTT 60.552 50.000 0.00 0.00 38.07 3.60
101 102 1.003233 GGACCCTCTTCAATGTCCGTT 59.997 52.381 0.00 0.00 38.07 4.44
102 103 0.613777 GGACCCTCTTCAATGTCCGT 59.386 55.000 0.00 0.00 38.07 4.69
103 104 3.460648 GGACCCTCTTCAATGTCCG 57.539 57.895 0.00 0.00 38.07 4.79
104 105 0.107654 CCGGACCCTCTTCAATGTCC 60.108 60.000 0.00 0.00 43.07 4.02
105 106 0.902531 TCCGGACCCTCTTCAATGTC 59.097 55.000 0.00 0.00 0.00 3.06
106 107 0.613777 GTCCGGACCCTCTTCAATGT 59.386 55.000 24.75 0.00 0.00 2.71
107 108 0.107654 GGTCCGGACCCTCTTCAATG 60.108 60.000 39.24 0.00 45.68 2.82
108 109 2.297937 GGTCCGGACCCTCTTCAAT 58.702 57.895 39.24 0.00 45.68 2.57
109 110 3.801620 GGTCCGGACCCTCTTCAA 58.198 61.111 39.24 0.00 45.68 2.69
118 119 1.084289 GCAGTTGTTATGGTCCGGAC 58.916 55.000 27.04 27.04 0.00 4.79
119 120 0.390603 CGCAGTTGTTATGGTCCGGA 60.391 55.000 0.00 0.00 0.00 5.14
120 121 1.366111 CCGCAGTTGTTATGGTCCGG 61.366 60.000 0.00 0.00 0.00 5.14
121 122 1.366111 CCCGCAGTTGTTATGGTCCG 61.366 60.000 0.00 0.00 0.00 4.79
122 123 0.322187 ACCCGCAGTTGTTATGGTCC 60.322 55.000 0.00 0.00 0.00 4.46
123 124 2.004733 GTACCCGCAGTTGTTATGGTC 58.995 52.381 0.00 0.00 0.00 4.02
124 125 1.673626 CGTACCCGCAGTTGTTATGGT 60.674 52.381 0.00 0.00 0.00 3.55
125 126 1.003851 CGTACCCGCAGTTGTTATGG 58.996 55.000 0.00 0.00 0.00 2.74
151 152 3.352338 CTACCTCACGGTCCCGCAC 62.352 68.421 5.47 0.00 44.21 5.34
152 153 3.066190 CTACCTCACGGTCCCGCA 61.066 66.667 5.47 0.00 44.21 5.69
153 154 3.834799 CCTACCTCACGGTCCCGC 61.835 72.222 5.47 0.00 44.21 6.13
154 155 2.362120 ACCTACCTCACGGTCCCG 60.362 66.667 3.76 3.76 44.21 5.14
155 156 2.356780 CCACCTACCTCACGGTCCC 61.357 68.421 0.00 0.00 44.21 4.46
156 157 3.015312 GCCACCTACCTCACGGTCC 62.015 68.421 0.00 0.00 44.21 4.46
157 158 1.982938 AGCCACCTACCTCACGGTC 60.983 63.158 0.00 0.00 44.21 4.79
159 160 1.949847 CTCAGCCACCTACCTCACGG 61.950 65.000 0.00 0.00 0.00 4.94
160 161 0.965866 TCTCAGCCACCTACCTCACG 60.966 60.000 0.00 0.00 0.00 4.35
161 162 0.820871 CTCTCAGCCACCTACCTCAC 59.179 60.000 0.00 0.00 0.00 3.51
162 163 0.704664 TCTCTCAGCCACCTACCTCA 59.295 55.000 0.00 0.00 0.00 3.86
163 164 1.398692 CTCTCTCAGCCACCTACCTC 58.601 60.000 0.00 0.00 0.00 3.85
164 165 0.032615 CCTCTCTCAGCCACCTACCT 60.033 60.000 0.00 0.00 0.00 3.08
165 166 0.324830 ACCTCTCTCAGCCACCTACC 60.325 60.000 0.00 0.00 0.00 3.18
166 167 1.107945 GACCTCTCTCAGCCACCTAC 58.892 60.000 0.00 0.00 0.00 3.18
167 168 0.394488 CGACCTCTCTCAGCCACCTA 60.394 60.000 0.00 0.00 0.00 3.08
168 169 1.680651 CGACCTCTCTCAGCCACCT 60.681 63.158 0.00 0.00 0.00 4.00
169 170 1.979693 ACGACCTCTCTCAGCCACC 60.980 63.158 0.00 0.00 0.00 4.61
170 171 1.214062 CACGACCTCTCTCAGCCAC 59.786 63.158 0.00 0.00 0.00 5.01
171 172 1.228583 ACACGACCTCTCTCAGCCA 60.229 57.895 0.00 0.00 0.00 4.75
172 173 1.214062 CACACGACCTCTCTCAGCC 59.786 63.158 0.00 0.00 0.00 4.85
173 174 1.214062 CCACACGACCTCTCTCAGC 59.786 63.158 0.00 0.00 0.00 4.26
174 175 1.886585 CCCACACGACCTCTCTCAG 59.113 63.158 0.00 0.00 0.00 3.35
175 176 2.276116 GCCCACACGACCTCTCTCA 61.276 63.158 0.00 0.00 0.00 3.27
176 177 2.574399 GCCCACACGACCTCTCTC 59.426 66.667 0.00 0.00 0.00 3.20
177 178 3.374402 CGCCCACACGACCTCTCT 61.374 66.667 0.00 0.00 34.06 3.10
178 179 1.870055 TAACGCCCACACGACCTCTC 61.870 60.000 0.00 0.00 36.70 3.20
179 180 1.255667 ATAACGCCCACACGACCTCT 61.256 55.000 0.00 0.00 36.70 3.69
180 181 0.390735 AATAACGCCCACACGACCTC 60.391 55.000 0.00 0.00 36.70 3.85
181 182 0.390735 GAATAACGCCCACACGACCT 60.391 55.000 0.00 0.00 36.70 3.85
182 183 0.671163 TGAATAACGCCCACACGACC 60.671 55.000 0.00 0.00 36.70 4.79
183 184 1.365699 ATGAATAACGCCCACACGAC 58.634 50.000 0.00 0.00 36.70 4.34
184 185 2.102070 AATGAATAACGCCCACACGA 57.898 45.000 0.00 0.00 36.70 4.35
185 186 2.911819 AAATGAATAACGCCCACACG 57.088 45.000 0.00 0.00 39.50 4.49
186 187 2.666022 GCAAAATGAATAACGCCCACAC 59.334 45.455 0.00 0.00 0.00 3.82
187 188 2.297315 TGCAAAATGAATAACGCCCACA 59.703 40.909 0.00 0.00 0.00 4.17
188 189 2.666022 GTGCAAAATGAATAACGCCCAC 59.334 45.455 0.00 0.00 0.00 4.61
189 190 2.297315 TGTGCAAAATGAATAACGCCCA 59.703 40.909 0.00 0.00 0.00 5.36
190 191 2.666022 GTGTGCAAAATGAATAACGCCC 59.334 45.455 0.00 0.00 0.00 6.13
191 192 3.121113 GTGTGTGCAAAATGAATAACGCC 59.879 43.478 0.00 0.00 0.00 5.68
192 193 3.181554 CGTGTGTGCAAAATGAATAACGC 60.182 43.478 0.00 0.00 0.00 4.84
193 194 3.971871 ACGTGTGTGCAAAATGAATAACG 59.028 39.130 0.00 0.00 0.00 3.18
194 195 5.567534 CCTACGTGTGTGCAAAATGAATAAC 59.432 40.000 0.00 0.00 0.00 1.89
195 196 5.694816 CCTACGTGTGTGCAAAATGAATAA 58.305 37.500 0.00 0.00 0.00 1.40
196 197 4.378978 GCCTACGTGTGTGCAAAATGAATA 60.379 41.667 0.00 0.00 0.00 1.75
197 198 3.611530 GCCTACGTGTGTGCAAAATGAAT 60.612 43.478 0.00 0.00 0.00 2.57
198 199 2.287308 GCCTACGTGTGTGCAAAATGAA 60.287 45.455 0.00 0.00 0.00 2.57
199 200 1.265635 GCCTACGTGTGTGCAAAATGA 59.734 47.619 0.00 0.00 0.00 2.57
200 201 1.685302 GCCTACGTGTGTGCAAAATG 58.315 50.000 0.00 0.00 0.00 2.32
201 202 0.237235 CGCCTACGTGTGTGCAAAAT 59.763 50.000 0.00 0.00 33.53 1.82
202 203 1.644372 CGCCTACGTGTGTGCAAAA 59.356 52.632 0.00 0.00 33.53 2.44
203 204 3.325072 CGCCTACGTGTGTGCAAA 58.675 55.556 0.00 0.00 33.53 3.68
214 215 2.893398 CTCCTCCCACACGCCTAC 59.107 66.667 0.00 0.00 0.00 3.18
215 216 3.075005 GCTCCTCCCACACGCCTA 61.075 66.667 0.00 0.00 0.00 3.93
224 225 3.912745 TTTTTCCGCGGCTCCTCCC 62.913 63.158 23.51 0.00 0.00 4.30
225 226 2.359478 TTTTTCCGCGGCTCCTCC 60.359 61.111 23.51 0.00 0.00 4.30
242 243 0.816421 ACTAGCGCCCACACGTTTTT 60.816 50.000 2.29 0.00 34.88 1.94
243 244 0.816421 AACTAGCGCCCACACGTTTT 60.816 50.000 2.29 0.00 34.88 2.43
244 245 0.033781 TAACTAGCGCCCACACGTTT 59.966 50.000 2.29 0.00 34.88 3.60
245 246 0.248289 ATAACTAGCGCCCACACGTT 59.752 50.000 2.29 1.22 34.88 3.99
246 247 0.248289 AATAACTAGCGCCCACACGT 59.752 50.000 2.29 0.00 34.88 4.49
247 248 1.365699 AAATAACTAGCGCCCACACG 58.634 50.000 2.29 0.00 0.00 4.49
248 249 2.731027 GCAAAATAACTAGCGCCCACAC 60.731 50.000 2.29 0.00 0.00 3.82
249 250 1.470890 GCAAAATAACTAGCGCCCACA 59.529 47.619 2.29 0.00 0.00 4.17
250 251 1.202256 GGCAAAATAACTAGCGCCCAC 60.202 52.381 2.29 0.00 33.31 4.61
251 252 1.099689 GGCAAAATAACTAGCGCCCA 58.900 50.000 2.29 0.00 33.31 5.36
252 253 3.938653 GGCAAAATAACTAGCGCCC 57.061 52.632 2.29 0.00 33.31 6.13
253 254 1.099689 TGGGCAAAATAACTAGCGCC 58.900 50.000 2.29 0.00 38.93 6.53
254 255 1.470890 TGTGGGCAAAATAACTAGCGC 59.529 47.619 0.00 0.00 39.95 5.92
255 256 2.475519 CGTGTGGGCAAAATAACTAGCG 60.476 50.000 0.00 0.00 0.00 4.26
256 257 2.486592 ACGTGTGGGCAAAATAACTAGC 59.513 45.455 0.00 0.00 0.00 3.42
257 258 4.331717 CCTACGTGTGGGCAAAATAACTAG 59.668 45.833 0.00 0.00 0.00 2.57
258 259 4.255301 CCTACGTGTGGGCAAAATAACTA 58.745 43.478 0.00 0.00 0.00 2.24
259 260 3.078837 CCTACGTGTGGGCAAAATAACT 58.921 45.455 0.00 0.00 0.00 2.24
260 261 3.481112 CCTACGTGTGGGCAAAATAAC 57.519 47.619 0.00 0.00 0.00 1.89
269 270 3.195002 CGCATGCCTACGTGTGGG 61.195 66.667 13.15 0.00 39.23 4.61
271 272 3.195002 CCCGCATGCCTACGTGTG 61.195 66.667 13.15 0.00 41.97 3.82
272 273 3.248446 AACCCGCATGCCTACGTGT 62.248 57.895 13.15 0.00 35.09 4.49
273 274 2.435938 AACCCGCATGCCTACGTG 60.436 61.111 13.15 0.00 35.78 4.49
274 275 2.252072 ATCAACCCGCATGCCTACGT 62.252 55.000 13.15 0.00 0.00 3.57
275 276 1.498865 GATCAACCCGCATGCCTACG 61.499 60.000 13.15 0.00 0.00 3.51
276 277 1.166531 GGATCAACCCGCATGCCTAC 61.167 60.000 13.15 0.00 0.00 3.18
277 278 1.148273 GGATCAACCCGCATGCCTA 59.852 57.895 13.15 0.00 0.00 3.93
278 279 2.124151 GGATCAACCCGCATGCCT 60.124 61.111 13.15 0.00 0.00 4.75
279 280 2.124151 AGGATCAACCCGCATGCC 60.124 61.111 13.15 0.00 40.05 4.40
280 281 0.749454 AAGAGGATCAACCCGCATGC 60.749 55.000 7.91 7.91 40.05 4.06
281 282 2.103094 TCTAAGAGGATCAACCCGCATG 59.897 50.000 0.00 0.00 40.05 4.06
282 283 2.103263 GTCTAAGAGGATCAACCCGCAT 59.897 50.000 0.00 0.00 40.05 4.73
283 284 1.480954 GTCTAAGAGGATCAACCCGCA 59.519 52.381 0.00 0.00 40.05 5.69
284 285 1.480954 TGTCTAAGAGGATCAACCCGC 59.519 52.381 0.00 0.00 40.05 6.13
285 286 2.761208 AGTGTCTAAGAGGATCAACCCG 59.239 50.000 0.00 0.00 40.05 5.28
286 287 4.710375 TGTAGTGTCTAAGAGGATCAACCC 59.290 45.833 0.00 0.00 40.05 4.11
287 288 5.185249 TGTGTAGTGTCTAAGAGGATCAACC 59.815 44.000 0.00 0.00 37.82 3.77
288 289 6.268825 TGTGTAGTGTCTAAGAGGATCAAC 57.731 41.667 0.00 0.00 37.82 3.18
289 290 6.911250 TTGTGTAGTGTCTAAGAGGATCAA 57.089 37.500 0.00 0.00 37.82 2.57
290 291 6.911250 TTTGTGTAGTGTCTAAGAGGATCA 57.089 37.500 0.00 0.00 37.82 2.92
291 292 6.308282 CGTTTTGTGTAGTGTCTAAGAGGATC 59.692 42.308 0.00 0.00 0.00 3.36
292 293 6.157211 CGTTTTGTGTAGTGTCTAAGAGGAT 58.843 40.000 0.00 0.00 0.00 3.24
293 294 5.068198 ACGTTTTGTGTAGTGTCTAAGAGGA 59.932 40.000 0.00 0.00 0.00 3.71
294 295 5.287226 ACGTTTTGTGTAGTGTCTAAGAGG 58.713 41.667 0.00 0.00 0.00 3.69
295 296 7.061905 CCATACGTTTTGTGTAGTGTCTAAGAG 59.938 40.741 0.00 0.00 0.00 2.85
296 297 6.864685 CCATACGTTTTGTGTAGTGTCTAAGA 59.135 38.462 0.00 0.00 0.00 2.10
297 298 6.090358 CCCATACGTTTTGTGTAGTGTCTAAG 59.910 42.308 0.00 0.00 0.00 2.18
298 299 5.927689 CCCATACGTTTTGTGTAGTGTCTAA 59.072 40.000 0.00 0.00 0.00 2.10
299 300 5.472148 CCCATACGTTTTGTGTAGTGTCTA 58.528 41.667 0.00 0.00 0.00 2.59
300 301 4.312443 CCCATACGTTTTGTGTAGTGTCT 58.688 43.478 0.00 0.00 0.00 3.41
301 302 3.434299 CCCCATACGTTTTGTGTAGTGTC 59.566 47.826 0.00 0.00 0.00 3.67
302 303 3.181452 ACCCCATACGTTTTGTGTAGTGT 60.181 43.478 0.00 0.00 0.00 3.55
303 304 3.404899 ACCCCATACGTTTTGTGTAGTG 58.595 45.455 0.00 0.00 0.00 2.74
304 305 3.557686 GGACCCCATACGTTTTGTGTAGT 60.558 47.826 0.00 0.00 0.00 2.73
305 306 3.004862 GGACCCCATACGTTTTGTGTAG 58.995 50.000 0.00 0.00 0.00 2.74
306 307 2.371179 TGGACCCCATACGTTTTGTGTA 59.629 45.455 0.00 0.00 0.00 2.90
307 308 1.143277 TGGACCCCATACGTTTTGTGT 59.857 47.619 0.00 0.00 0.00 3.72
308 309 1.898902 TGGACCCCATACGTTTTGTG 58.101 50.000 0.00 0.00 0.00 3.33
309 310 2.660670 TTGGACCCCATACGTTTTGT 57.339 45.000 0.00 0.00 31.53 2.83
310 311 2.165437 CCATTGGACCCCATACGTTTTG 59.835 50.000 0.00 0.00 31.53 2.44
311 312 2.452505 CCATTGGACCCCATACGTTTT 58.547 47.619 0.00 0.00 31.53 2.43
312 313 1.958069 GCCATTGGACCCCATACGTTT 60.958 52.381 6.95 0.00 31.53 3.60
313 314 0.395173 GCCATTGGACCCCATACGTT 60.395 55.000 6.95 0.00 31.53 3.99
314 315 1.226262 GCCATTGGACCCCATACGT 59.774 57.895 6.95 0.00 31.53 3.57
315 316 0.395036 TTGCCATTGGACCCCATACG 60.395 55.000 6.95 0.00 31.53 3.06
316 317 1.111277 GTTGCCATTGGACCCCATAC 58.889 55.000 6.95 0.00 31.53 2.39
317 318 1.006813 AGTTGCCATTGGACCCCATA 58.993 50.000 6.95 0.00 31.53 2.74
318 319 1.006813 TAGTTGCCATTGGACCCCAT 58.993 50.000 6.95 0.00 31.53 4.00
319 320 1.006813 ATAGTTGCCATTGGACCCCA 58.993 50.000 6.95 0.00 0.00 4.96
320 321 1.064017 TCATAGTTGCCATTGGACCCC 60.064 52.381 6.95 0.00 0.00 4.95
321 322 2.435372 TCATAGTTGCCATTGGACCC 57.565 50.000 6.95 0.00 0.00 4.46
322 323 3.554934 TCATCATAGTTGCCATTGGACC 58.445 45.455 6.95 0.00 0.00 4.46
323 324 5.300034 TCATTCATCATAGTTGCCATTGGAC 59.700 40.000 6.95 0.00 0.00 4.02
324 325 5.447757 TCATTCATCATAGTTGCCATTGGA 58.552 37.500 6.95 0.00 0.00 3.53
325 326 5.777850 TCATTCATCATAGTTGCCATTGG 57.222 39.130 0.00 0.00 0.00 3.16
326 327 6.977213 TCATCATTCATCATAGTTGCCATTG 58.023 36.000 0.00 0.00 0.00 2.82
327 328 7.776618 ATCATCATTCATCATAGTTGCCATT 57.223 32.000 0.00 0.00 0.00 3.16
328 329 7.309805 CCAATCATCATTCATCATAGTTGCCAT 60.310 37.037 0.00 0.00 0.00 4.40
329 330 6.015772 CCAATCATCATTCATCATAGTTGCCA 60.016 38.462 0.00 0.00 0.00 4.92
330 331 6.208007 TCCAATCATCATTCATCATAGTTGCC 59.792 38.462 0.00 0.00 0.00 4.52
331 332 7.210718 TCCAATCATCATTCATCATAGTTGC 57.789 36.000 0.00 0.00 0.00 4.17
332 333 7.447545 ACCTCCAATCATCATTCATCATAGTTG 59.552 37.037 0.00 0.00 0.00 3.16
333 334 7.524290 ACCTCCAATCATCATTCATCATAGTT 58.476 34.615 0.00 0.00 0.00 2.24
334 335 7.087895 ACCTCCAATCATCATTCATCATAGT 57.912 36.000 0.00 0.00 0.00 2.12
335 336 7.166167 TGACCTCCAATCATCATTCATCATAG 58.834 38.462 0.00 0.00 0.00 2.23
336 337 7.081857 TGACCTCCAATCATCATTCATCATA 57.918 36.000 0.00 0.00 0.00 2.15
337 338 5.948842 TGACCTCCAATCATCATTCATCAT 58.051 37.500 0.00 0.00 0.00 2.45
338 339 5.376756 TGACCTCCAATCATCATTCATCA 57.623 39.130 0.00 0.00 0.00 3.07
339 340 6.002082 TCATGACCTCCAATCATCATTCATC 58.998 40.000 0.00 0.00 34.49 2.92
340 341 5.948842 TCATGACCTCCAATCATCATTCAT 58.051 37.500 0.00 0.00 34.49 2.57
341 342 5.376756 TCATGACCTCCAATCATCATTCA 57.623 39.130 0.00 0.00 34.49 2.57
342 343 5.121925 CGATCATGACCTCCAATCATCATTC 59.878 44.000 0.00 0.00 34.49 2.67
343 344 5.001874 CGATCATGACCTCCAATCATCATT 58.998 41.667 0.00 0.00 34.49 2.57
344 345 4.576879 CGATCATGACCTCCAATCATCAT 58.423 43.478 0.00 0.00 34.49 2.45
345 346 3.804759 GCGATCATGACCTCCAATCATCA 60.805 47.826 0.00 0.00 34.49 3.07
346 347 2.740981 GCGATCATGACCTCCAATCATC 59.259 50.000 0.00 0.00 34.49 2.92
347 348 2.371179 AGCGATCATGACCTCCAATCAT 59.629 45.455 0.00 0.00 37.27 2.45
348 349 1.764723 AGCGATCATGACCTCCAATCA 59.235 47.619 0.00 0.00 0.00 2.57
349 350 2.540265 AGCGATCATGACCTCCAATC 57.460 50.000 0.00 0.00 0.00 2.67
350 351 2.569059 CAAGCGATCATGACCTCCAAT 58.431 47.619 0.00 0.00 0.00 3.16
351 352 1.407299 CCAAGCGATCATGACCTCCAA 60.407 52.381 0.00 0.00 0.00 3.53
352 353 0.178767 CCAAGCGATCATGACCTCCA 59.821 55.000 0.00 0.00 0.00 3.86
353 354 0.533755 CCCAAGCGATCATGACCTCC 60.534 60.000 0.00 0.00 0.00 4.30
354 355 0.179000 ACCCAAGCGATCATGACCTC 59.821 55.000 0.00 0.00 0.00 3.85
355 356 0.179000 GACCCAAGCGATCATGACCT 59.821 55.000 0.00 0.00 0.00 3.85
356 357 0.179000 AGACCCAAGCGATCATGACC 59.821 55.000 0.00 0.00 0.00 4.02
357 358 1.667724 CAAGACCCAAGCGATCATGAC 59.332 52.381 0.00 0.00 0.00 3.06
358 359 2.013563 GCAAGACCCAAGCGATCATGA 61.014 52.381 0.00 0.00 0.00 3.07
359 360 0.379669 GCAAGACCCAAGCGATCATG 59.620 55.000 0.00 0.00 0.00 3.07
360 361 2.785868 GCAAGACCCAAGCGATCAT 58.214 52.632 0.00 0.00 0.00 2.45
361 362 4.301505 GCAAGACCCAAGCGATCA 57.698 55.556 0.00 0.00 0.00 2.92
366 367 2.193536 ACCAACGCAAGACCCAAGC 61.194 57.895 0.00 0.00 43.62 4.01
367 368 1.654220 CACCAACGCAAGACCCAAG 59.346 57.895 0.00 0.00 43.62 3.61
368 369 1.826054 CCACCAACGCAAGACCCAA 60.826 57.895 0.00 0.00 43.62 4.12
369 370 2.203280 CCACCAACGCAAGACCCA 60.203 61.111 0.00 0.00 43.62 4.51
370 371 3.670377 GCCACCAACGCAAGACCC 61.670 66.667 0.00 0.00 43.62 4.46
371 372 2.193536 AAGCCACCAACGCAAGACC 61.194 57.895 0.00 0.00 43.62 3.85
372 373 1.008538 CAAGCCACCAACGCAAGAC 60.009 57.895 0.00 0.00 43.62 3.01
373 374 2.844451 GCAAGCCACCAACGCAAGA 61.844 57.895 0.00 0.00 43.62 3.02
375 376 2.422231 AAGCAAGCCACCAACGCAA 61.422 52.632 0.00 0.00 0.00 4.85
376 377 2.832661 AAGCAAGCCACCAACGCA 60.833 55.556 0.00 0.00 0.00 5.24
377 378 2.355009 CAAGCAAGCCACCAACGC 60.355 61.111 0.00 0.00 0.00 4.84
378 379 2.336088 CCAAGCAAGCCACCAACG 59.664 61.111 0.00 0.00 0.00 4.10
379 380 2.029518 GCCAAGCAAGCCACCAAC 59.970 61.111 0.00 0.00 0.00 3.77
380 381 3.604667 CGCCAAGCAAGCCACCAA 61.605 61.111 0.00 0.00 0.00 3.67
381 382 4.892965 ACGCCAAGCAAGCCACCA 62.893 61.111 0.00 0.00 0.00 4.17
382 383 3.150647 AAACGCCAAGCAAGCCACC 62.151 57.895 0.00 0.00 0.00 4.61
383 384 1.950630 CAAACGCCAAGCAAGCCAC 60.951 57.895 0.00 0.00 0.00 5.01
384 385 2.416678 CAAACGCCAAGCAAGCCA 59.583 55.556 0.00 0.00 0.00 4.75
385 386 3.037833 GCAAACGCCAAGCAAGCC 61.038 61.111 0.00 0.00 0.00 4.35
386 387 3.397317 CGCAAACGCCAAGCAAGC 61.397 61.111 0.00 0.00 0.00 4.01
387 388 2.026014 ACGCAAACGCCAAGCAAG 59.974 55.556 0.00 0.00 45.53 4.01
388 389 2.278466 CACGCAAACGCCAAGCAA 60.278 55.556 0.00 0.00 45.53 3.91
389 390 4.921847 GCACGCAAACGCCAAGCA 62.922 61.111 0.00 0.00 45.53 3.91
391 392 4.605967 ACGCACGCAAACGCCAAG 62.606 61.111 0.00 0.00 45.53 3.61
392 393 4.896028 CACGCACGCAAACGCCAA 62.896 61.111 0.00 0.00 45.53 4.52
395 396 4.293626 AGACACGCACGCAAACGC 62.294 61.111 0.00 0.00 45.53 4.84
397 398 2.248431 GGAGACACGCACGCAAAC 59.752 61.111 0.00 0.00 0.00 2.93
398 399 2.970324 GGGAGACACGCACGCAAA 60.970 61.111 0.00 0.00 0.00 3.68
402 403 3.626680 ATCACGGGAGACACGCACG 62.627 63.158 0.00 0.00 34.00 5.34
403 404 1.805945 GATCACGGGAGACACGCAC 60.806 63.158 0.00 0.00 34.00 5.34
404 405 1.934220 GAGATCACGGGAGACACGCA 61.934 60.000 0.00 0.00 34.00 5.24
405 406 1.226717 GAGATCACGGGAGACACGC 60.227 63.158 0.00 0.00 34.00 5.34
406 407 1.062685 CGAGATCACGGGAGACACG 59.937 63.158 4.47 0.00 37.36 4.49
407 408 0.099082 GTCGAGATCACGGGAGACAC 59.901 60.000 12.66 0.00 0.00 3.67
408 409 1.366854 CGTCGAGATCACGGGAGACA 61.367 60.000 12.66 0.00 33.46 3.41
409 410 1.088340 TCGTCGAGATCACGGGAGAC 61.088 60.000 12.66 2.68 37.85 3.36
410 411 0.810426 CTCGTCGAGATCACGGGAGA 60.810 60.000 17.52 13.54 40.38 3.71
411 412 0.810426 TCTCGTCGAGATCACGGGAG 60.810 60.000 20.85 20.04 41.84 4.30
412 413 1.219935 TCTCGTCGAGATCACGGGA 59.780 57.895 20.85 7.60 44.48 5.14
413 414 2.322212 ATCTCGTCGAGATCACGGG 58.678 57.895 28.09 5.16 45.03 5.28
427 428 0.038343 GCTGGCCTCATCGAGATCTC 60.038 60.000 13.05 13.05 0.00 2.75
428 429 1.470996 GGCTGGCCTCATCGAGATCT 61.471 60.000 3.32 0.00 0.00 2.75
429 430 1.005156 GGCTGGCCTCATCGAGATC 60.005 63.158 3.32 0.00 0.00 2.75
430 431 2.865598 CGGCTGGCCTCATCGAGAT 61.866 63.158 3.32 0.00 0.00 2.75
431 432 3.531207 CGGCTGGCCTCATCGAGA 61.531 66.667 3.32 0.00 0.00 4.04
432 433 4.598894 CCGGCTGGCCTCATCGAG 62.599 72.222 3.32 0.00 0.00 4.04
441 442 4.176752 CTAAGGTCCCCGGCTGGC 62.177 72.222 5.85 0.00 0.00 4.85
442 443 3.480133 CCTAAGGTCCCCGGCTGG 61.480 72.222 3.88 3.88 0.00 4.85
443 444 4.176752 GCCTAAGGTCCCCGGCTG 62.177 72.222 0.00 0.00 39.42 4.85
449 450 4.222847 CTCGGCGCCTAAGGTCCC 62.223 72.222 26.68 0.00 0.00 4.46
450 451 4.893601 GCTCGGCGCCTAAGGTCC 62.894 72.222 26.68 5.52 0.00 4.46
451 452 3.839432 AGCTCGGCGCCTAAGGTC 61.839 66.667 26.68 9.74 40.39 3.85
452 453 4.148825 CAGCTCGGCGCCTAAGGT 62.149 66.667 26.68 23.17 40.39 3.50
453 454 3.157217 ATCAGCTCGGCGCCTAAGG 62.157 63.158 26.68 9.07 40.39 2.69
454 455 1.953138 CATCAGCTCGGCGCCTAAG 60.953 63.158 26.68 21.99 40.39 2.18
455 456 2.106938 CATCAGCTCGGCGCCTAA 59.893 61.111 26.68 11.82 40.39 2.69
456 457 2.833121 TCATCAGCTCGGCGCCTA 60.833 61.111 26.68 13.77 40.39 3.93
457 458 4.218578 CTCATCAGCTCGGCGCCT 62.219 66.667 26.68 1.35 40.39 5.52
460 461 4.218578 AGGCTCATCAGCTCGGCG 62.219 66.667 0.00 0.00 46.03 6.46
461 462 2.280052 GAGGCTCATCAGCTCGGC 60.280 66.667 10.25 0.00 46.03 5.54
462 463 2.027314 CGAGGCTCATCAGCTCGG 59.973 66.667 15.95 0.00 46.03 4.63
463 464 2.027314 CCGAGGCTCATCAGCTCG 59.973 66.667 15.95 0.00 46.03 5.03
464 465 0.809241 CAACCGAGGCTCATCAGCTC 60.809 60.000 15.95 0.00 46.03 4.09
465 466 1.220206 CAACCGAGGCTCATCAGCT 59.780 57.895 15.95 0.00 46.03 4.24
466 467 2.467826 GCAACCGAGGCTCATCAGC 61.468 63.158 15.95 9.14 46.06 4.26
467 468 2.169789 CGCAACCGAGGCTCATCAG 61.170 63.158 15.95 2.52 36.29 2.90
468 469 2.125552 CGCAACCGAGGCTCATCA 60.126 61.111 15.95 0.00 36.29 3.07
469 470 2.125512 ACGCAACCGAGGCTCATC 60.126 61.111 15.95 0.00 38.29 2.92
470 471 2.434884 CACGCAACCGAGGCTCAT 60.435 61.111 15.95 0.00 38.29 2.90
471 472 3.858868 GACACGCAACCGAGGCTCA 62.859 63.158 15.95 0.00 38.29 4.26
472 473 3.112709 GACACGCAACCGAGGCTC 61.113 66.667 3.87 3.87 38.29 4.70
475 476 3.103911 GACGACACGCAACCGAGG 61.104 66.667 0.00 0.00 38.29 4.63
476 477 3.458579 CGACGACACGCAACCGAG 61.459 66.667 0.00 0.00 38.29 4.63
477 478 4.986587 CCGACGACACGCAACCGA 62.987 66.667 0.00 0.00 38.29 4.69
484 485 3.678717 CTAGGTGGCCGACGACACG 62.679 68.421 13.78 0.00 38.46 4.49
485 486 2.181021 CTAGGTGGCCGACGACAC 59.819 66.667 12.37 12.37 36.89 3.67
486 487 2.282674 ACTAGGTGGCCGACGACA 60.283 61.111 0.00 0.00 0.00 4.35
487 488 2.488820 GACTAGGTGGCCGACGAC 59.511 66.667 0.00 0.00 0.00 4.34
488 489 3.129502 CGACTAGGTGGCCGACGA 61.130 66.667 0.00 0.00 0.00 4.20
489 490 2.986306 AACGACTAGGTGGCCGACG 61.986 63.158 0.00 0.00 0.00 5.12
490 491 1.445582 CAACGACTAGGTGGCCGAC 60.446 63.158 0.00 0.00 32.78 4.79
491 492 1.904865 ACAACGACTAGGTGGCCGA 60.905 57.895 0.00 0.00 43.31 5.54
492 493 1.736645 CACAACGACTAGGTGGCCG 60.737 63.158 0.00 0.00 43.31 6.13
493 494 2.033194 GCACAACGACTAGGTGGCC 61.033 63.158 0.00 0.00 43.31 5.36
494 495 3.562635 GCACAACGACTAGGTGGC 58.437 61.111 0.00 0.00 43.31 5.01
504 505 0.299895 GATGCTGATCTCGCACAACG 59.700 55.000 11.53 0.00 40.65 4.10
505 506 0.299895 CGATGCTGATCTCGCACAAC 59.700 55.000 11.53 6.74 40.65 3.32
506 507 2.669419 CGATGCTGATCTCGCACAA 58.331 52.632 11.53 0.00 40.65 3.33
507 508 4.407551 CGATGCTGATCTCGCACA 57.592 55.556 11.53 0.00 40.65 4.57
511 512 0.529337 ACTTGGCGATGCTGATCTCG 60.529 55.000 0.00 0.00 37.92 4.04
512 513 0.935898 CACTTGGCGATGCTGATCTC 59.064 55.000 0.00 0.00 0.00 2.75
513 514 1.094073 GCACTTGGCGATGCTGATCT 61.094 55.000 0.00 0.00 38.84 2.75
569 570 1.393539 CGCTCCGAATTGAATCGTTGT 59.606 47.619 0.00 0.00 41.16 3.32
575 576 1.643868 TTGCGCGCTCCGAATTGAAT 61.644 50.000 33.29 0.00 40.02 2.57
623 648 6.220201 TGTTTGCCTAACTTTAAAAGATGGC 58.780 36.000 12.30 12.30 39.80 4.40
624 649 7.384932 CCTTGTTTGCCTAACTTTAAAAGATGG 59.615 37.037 0.00 0.00 37.64 3.51
625 650 7.926018 ACCTTGTTTGCCTAACTTTAAAAGATG 59.074 33.333 0.00 0.00 37.64 2.90
626 651 8.018537 ACCTTGTTTGCCTAACTTTAAAAGAT 57.981 30.769 0.00 0.00 37.64 2.40
629 654 6.267070 CGACCTTGTTTGCCTAACTTTAAAA 58.733 36.000 0.00 0.00 37.64 1.52
630 655 5.733937 GCGACCTTGTTTGCCTAACTTTAAA 60.734 40.000 0.00 0.00 37.64 1.52
635 667 1.235724 GCGACCTTGTTTGCCTAACT 58.764 50.000 0.00 0.00 37.64 2.24
636 668 0.240145 GGCGACCTTGTTTGCCTAAC 59.760 55.000 0.00 0.00 44.16 2.34
641 673 2.715737 TTTATGGCGACCTTGTTTGC 57.284 45.000 0.00 0.00 0.00 3.68
684 719 5.929697 TGATGAGATGGCAACGATTATTC 57.070 39.130 0.00 0.00 42.51 1.75
693 731 2.431782 TCAGACGATGATGAGATGGCAA 59.568 45.455 0.00 0.00 31.12 4.52
719 761 3.610040 TGGATGGATGTATATGGACGC 57.390 47.619 0.00 0.00 0.00 5.19
721 763 4.405680 TCCGATGGATGGATGTATATGGAC 59.594 45.833 0.00 0.00 0.00 4.02
729 773 1.418908 GGGGTCCGATGGATGGATGT 61.419 60.000 0.00 0.00 37.93 3.06
737 785 1.424638 ACTTATCTGGGGTCCGATGG 58.575 55.000 0.00 0.00 0.00 3.51
792 842 3.181499 CCGACAGCGACTTGTCTAATACT 60.181 47.826 11.59 0.00 44.13 2.12
851 901 2.738480 GGTTTTCAAACGGGGGCC 59.262 61.111 0.00 0.00 39.77 5.80
936 993 3.120820 CGAATGTCGAACGAATGTGGAAA 60.121 43.478 0.00 0.00 43.74 3.13
947 1006 0.365859 GGAAGACGCGAATGTCGAAC 59.634 55.000 15.93 0.00 43.74 3.95
948 1007 1.068832 CGGAAGACGCGAATGTCGAA 61.069 55.000 15.93 0.00 43.74 3.71
949 1008 1.513373 CGGAAGACGCGAATGTCGA 60.513 57.895 15.93 0.00 43.74 4.20
950 1009 2.987593 CGGAAGACGCGAATGTCG 59.012 61.111 15.93 7.35 43.70 4.35
960 1019 3.991536 GACCGGCAGAGCGGAAGAC 62.992 68.421 0.00 0.00 0.00 3.01
1212 1277 4.429212 TCATCGACCACCGCCGTG 62.429 66.667 0.00 0.00 39.91 4.94
1278 1352 2.351244 CGTACCTGAGGCAGAGGCA 61.351 63.158 0.00 0.00 43.71 4.75
1291 1365 1.394697 TTCGAACGAACGAACGTACC 58.605 50.000 14.59 6.70 45.21 3.34
1298 1372 3.278367 AGTGAGATTTCGAACGAACGA 57.722 42.857 9.15 0.00 40.55 3.85
1311 1385 5.221145 CCAGAATACTACTGCGAAGTGAGAT 60.221 44.000 6.22 0.00 34.47 2.75
1316 1390 2.496070 TGCCAGAATACTACTGCGAAGT 59.504 45.455 0.00 0.00 34.47 3.01
1323 1397 3.251245 CGATCGACTGCCAGAATACTACT 59.749 47.826 10.26 0.00 0.00 2.57
1326 1400 2.298610 TCGATCGACTGCCAGAATACT 58.701 47.619 15.15 0.00 0.00 2.12
1343 1417 4.084223 GGCTCGACAACAAACTAAATTCGA 60.084 41.667 0.00 0.00 33.34 3.71
1351 1425 0.878961 GACGGGCTCGACAACAAACT 60.879 55.000 15.95 0.00 40.11 2.66
1357 1431 2.847754 TTCGTGACGGGCTCGACAA 61.848 57.895 15.95 0.00 41.89 3.18
1362 1436 0.872388 AAATTGTTCGTGACGGGCTC 59.128 50.000 4.70 0.00 0.00 4.70
1366 1440 1.527736 TCGGAAAATTGTTCGTGACGG 59.472 47.619 4.70 0.00 0.00 4.79
1372 1446 3.171277 GCTGGAATCGGAAAATTGTTCG 58.829 45.455 0.00 0.00 0.00 3.95
1375 1449 2.919666 CGCTGGAATCGGAAAATTGT 57.080 45.000 0.00 0.00 0.00 2.71
1601 1690 4.097361 GACTCGGGGTTGAGGGCC 62.097 72.222 0.00 0.00 40.39 5.80
1602 1691 4.097361 GGACTCGGGGTTGAGGGC 62.097 72.222 0.00 0.00 40.39 5.19
1670 1759 4.873129 CGATGGTCCTCGCACCGG 62.873 72.222 0.00 0.00 39.62 5.28
1673 1762 2.579787 CGACGATGGTCCTCGCAC 60.580 66.667 1.93 5.18 42.35 5.34
1954 2052 0.306533 GTCGTCGTTGTTGTTGCCAT 59.693 50.000 0.00 0.00 0.00 4.40
1957 2055 0.381428 CTCGTCGTCGTTGTTGTTGC 60.381 55.000 1.33 0.00 38.33 4.17
1958 2056 0.228742 CCTCGTCGTCGTTGTTGTTG 59.771 55.000 1.33 0.00 38.33 3.33
2216 2323 4.832608 GTGGGGGCTTACGGCGAG 62.833 72.222 16.62 1.58 42.94 5.03
2249 2361 4.035675 CCTTGCGTGGAGGAGAATTAATTC 59.964 45.833 18.70 18.70 36.33 2.17
2278 2395 2.431601 AAGAGCAGTCACGAGCGC 60.432 61.111 0.00 0.00 35.48 5.92
2288 2405 1.079543 CTCGGTGGTGGAAGAGCAG 60.080 63.158 0.00 0.00 30.97 4.24
2289 2406 0.541063 TACTCGGTGGTGGAAGAGCA 60.541 55.000 0.00 0.00 34.31 4.26
2290 2407 0.606604 TTACTCGGTGGTGGAAGAGC 59.393 55.000 0.00 0.00 34.31 4.09
2291 2408 3.195825 AGAATTACTCGGTGGTGGAAGAG 59.804 47.826 0.00 0.00 36.83 2.85
2292 2409 3.170717 AGAATTACTCGGTGGTGGAAGA 58.829 45.455 0.00 0.00 0.00 2.87
2293 2410 3.522553 GAGAATTACTCGGTGGTGGAAG 58.477 50.000 0.00 0.00 35.84 3.46
2294 2411 3.604875 GAGAATTACTCGGTGGTGGAA 57.395 47.619 0.00 0.00 35.84 3.53
2310 2428 3.325135 GGGAGAAGGAACAGTCAAGAGAA 59.675 47.826 0.00 0.00 0.00 2.87
2316 2434 2.398754 TCAGGGAGAAGGAACAGTCA 57.601 50.000 0.00 0.00 0.00 3.41
2337 2458 0.976641 TCCTCATCTGCACGGAAAGT 59.023 50.000 0.00 0.00 0.00 2.66
2338 2459 2.099141 TTCCTCATCTGCACGGAAAG 57.901 50.000 0.00 0.00 32.92 2.62
2369 2490 3.798337 CCATGATAATGCCGACAAAAAGC 59.202 43.478 0.00 0.00 0.00 3.51
2380 2501 0.729116 CGGCCGATCCATGATAATGC 59.271 55.000 24.07 0.00 34.01 3.56
2568 2996 5.428253 CCATGTAACCTACAACAGTGCTAT 58.572 41.667 0.00 0.00 42.76 2.97
2674 3102 2.953648 TGAACAGACACTGAACTCGGTA 59.046 45.455 5.76 0.00 35.18 4.02
2676 3104 2.509052 TGAACAGACACTGAACTCGG 57.491 50.000 5.76 0.00 35.18 4.63
2710 3138 5.939883 TGCTGTACTAATTCTGAAACTGCAT 59.060 36.000 15.28 0.00 37.04 3.96
2743 3171 7.559486 ACTGATTCTGAAACTGCATATGAGTA 58.441 34.615 6.97 0.00 0.00 2.59
2751 3183 5.733676 TGCTATACTGATTCTGAAACTGCA 58.266 37.500 0.00 0.00 0.00 4.41
2770 3202 2.677836 CGAGCAGGCTGTAAAATTGCTA 59.322 45.455 17.16 0.00 44.46 3.49
2791 3223 2.476241 GTGTAATTGGCAAAAGCACTGC 59.524 45.455 17.90 0.00 39.16 4.40
2797 3229 7.167468 GTCAGTGTAAAGTGTAATTGGCAAAAG 59.833 37.037 3.01 0.00 0.00 2.27
2805 3237 6.930667 AAACCGTCAGTGTAAAGTGTAATT 57.069 33.333 0.00 0.00 0.00 1.40
2857 3289 8.128582 TGCAAAGTCATTTCCAACGAATATATC 58.871 33.333 0.00 0.00 0.00 1.63
2866 3298 3.096489 TGCTGCAAAGTCATTTCCAAC 57.904 42.857 0.00 0.00 0.00 3.77
2874 3306 4.455533 AGAATACGAAATGCTGCAAAGTCA 59.544 37.500 6.36 0.00 0.00 3.41
2883 3315 4.641989 AGCAATTCCAGAATACGAAATGCT 59.358 37.500 6.54 6.54 45.76 3.79
2888 3320 6.539324 CGTTTTAGCAATTCCAGAATACGAA 58.461 36.000 0.00 0.00 29.42 3.85
2950 3382 4.188247 TCATAGAAGTGACCGGTTTGAG 57.812 45.455 9.42 0.00 0.00 3.02
2953 3385 4.618920 ACTTCATAGAAGTGACCGGTTT 57.381 40.909 9.42 0.00 0.00 3.27
2954 3386 4.202326 ACAACTTCATAGAAGTGACCGGTT 60.202 41.667 9.42 0.00 0.00 4.44
2956 3388 3.679980 CACAACTTCATAGAAGTGACCGG 59.320 47.826 12.64 0.00 34.17 5.28
2975 3415 9.887406 GCTAGCAAAAATAGTTACTAAAACACA 57.113 29.630 10.63 0.00 0.00 3.72
2999 3439 7.499232 GGTATAAAACACCAGATAACAGATGCT 59.501 37.037 0.00 0.00 36.01 3.79
3000 3440 7.255139 GGGTATAAAACACCAGATAACAGATGC 60.255 40.741 0.00 0.00 37.84 3.91
3001 3441 7.993183 AGGGTATAAAACACCAGATAACAGATG 59.007 37.037 0.00 0.00 37.84 2.90
3016 3456 3.181500 CGGCTCAAAGCAGGGTATAAAAC 60.181 47.826 0.86 0.00 44.75 2.43
3018 3458 2.237643 TCGGCTCAAAGCAGGGTATAAA 59.762 45.455 0.86 0.00 44.75 1.40
3024 3464 2.037136 CACTCGGCTCAAAGCAGGG 61.037 63.158 0.86 0.00 44.75 4.45
3058 3498 6.443792 CCGTTCTATTGTTAAAGGCAGTTTT 58.556 36.000 0.00 0.00 0.00 2.43
3071 3511 5.952526 AAAATTCGTTCCCGTTCTATTGT 57.047 34.783 0.00 0.00 35.01 2.71
3118 3558 2.834549 AGAGCTAGCAGCAGTAGGAAAA 59.165 45.455 18.83 0.00 45.56 2.29
3126 3566 0.388659 ATCCGAAGAGCTAGCAGCAG 59.611 55.000 18.83 3.92 45.56 4.24
3129 3569 2.879002 TTGATCCGAAGAGCTAGCAG 57.121 50.000 18.83 2.43 0.00 4.24
3133 3573 4.405680 TCAATCCTTTGATCCGAAGAGCTA 59.594 41.667 7.34 0.00 36.94 3.32
3149 3589 6.918569 CACTCGTAAATCGTAATCTCAATCCT 59.081 38.462 0.00 0.00 40.80 3.24
3231 3680 6.255670 CCAAAAACAAGAAACCTTTGTAGAGC 59.744 38.462 0.00 0.00 37.77 4.09
3260 3717 2.093181 GGCACAAAAGGGAACAAGGTTT 60.093 45.455 0.00 0.00 0.00 3.27
3261 3718 1.484653 GGCACAAAAGGGAACAAGGTT 59.515 47.619 0.00 0.00 0.00 3.50
3290 3747 4.405680 ACTCACATTGTGGATCCGAAGATA 59.594 41.667 16.46 0.00 33.87 1.98
3291 3748 3.198635 ACTCACATTGTGGATCCGAAGAT 59.801 43.478 16.46 0.00 33.87 2.40
3321 3779 0.758685 TTGGGCAGACACAAAAGGGG 60.759 55.000 0.00 0.00 0.00 4.79
3332 3790 1.299648 CCCGACAGAATTGGGCAGA 59.700 57.895 0.00 0.00 45.93 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.