Multiple sequence alignment - TraesCS7B01G415000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G415000 chr7B 100.000 2426 0 0 1 2426 682887384 682884959 0.000000e+00 4481.0
1 TraesCS7B01G415000 chr7B 86.105 439 29 14 995 1414 682791391 682790966 6.150000e-121 444.0
2 TraesCS7B01G415000 chr7B 82.495 537 48 32 1006 1527 681750566 681751071 1.720000e-116 429.0
3 TraesCS7B01G415000 chr7B 87.500 336 24 12 1193 1527 681780146 681780464 2.950000e-99 372.0
4 TraesCS7B01G415000 chr7B 76.728 434 45 26 533 933 682791911 682791501 8.850000e-45 191.0
5 TraesCS7B01G415000 chr7B 80.882 204 17 7 750 933 681688464 681688665 9.040000e-30 141.0
6 TraesCS7B01G415000 chr7B 76.173 277 39 17 118 380 632928964 632928701 1.180000e-23 121.0
7 TraesCS7B01G415000 chr7B 86.000 100 13 1 691 789 681769608 681769707 3.300000e-19 106.0
8 TraesCS7B01G415000 chr7D 86.475 1220 82 47 464 1632 602196502 602197689 0.000000e+00 1262.0
9 TraesCS7B01G415000 chr7D 82.889 637 72 23 971 1574 602042849 602043481 2.740000e-149 538.0
10 TraesCS7B01G415000 chr7D 78.289 935 122 57 691 1573 602072543 602073448 5.940000e-146 527.0
11 TraesCS7B01G415000 chr7D 77.866 1003 112 54 539 1470 602295446 602294483 2.760000e-144 521.0
12 TraesCS7B01G415000 chr7D 82.683 589 62 26 976 1525 602409879 602409292 1.010000e-133 486.0
13 TraesCS7B01G415000 chr7D 78.022 455 35 26 513 922 602410412 602409978 2.430000e-55 226.0
14 TraesCS7B01G415000 chr7D 79.343 213 20 7 697 908 602194994 602194805 7.040000e-26 128.0
15 TraesCS7B01G415000 chr7A 89.789 852 48 9 666 1517 694093490 694092678 0.000000e+00 1055.0
16 TraesCS7B01G415000 chr7A 86.654 532 65 5 1900 2426 10422945 10423475 3.480000e-163 584.0
17 TraesCS7B01G415000 chr7A 82.556 579 61 29 974 1520 693838586 693839156 7.850000e-130 473.0
18 TraesCS7B01G415000 chr7A 84.152 448 48 16 995 1420 694022575 694022129 1.740000e-111 412.0
19 TraesCS7B01G415000 chr7A 82.368 397 42 13 245 630 694093860 694093481 1.080000e-83 320.0
20 TraesCS7B01G415000 chr7A 84.000 250 20 5 689 919 693815227 693815475 3.140000e-54 222.0
21 TraesCS7B01G415000 chr7A 77.064 218 36 9 691 907 693838280 693838484 1.970000e-21 113.0
22 TraesCS7B01G415000 chrUn 80.886 926 81 51 692 1564 87232659 87231777 2.030000e-180 641.0
23 TraesCS7B01G415000 chr3D 86.882 526 65 4 1905 2426 56362592 56362067 9.660000e-164 586.0
24 TraesCS7B01G415000 chr2A 86.717 527 65 4 1905 2426 26933183 26932657 4.500000e-162 580.0
25 TraesCS7B01G415000 chr2A 86.528 527 66 4 1905 2426 138922380 138922906 2.090000e-160 575.0
26 TraesCS7B01G415000 chr2D 86.578 529 65 5 1904 2426 645666369 645665841 1.620000e-161 579.0
27 TraesCS7B01G415000 chr6A 86.528 527 66 4 1905 2426 590370890 590371416 2.090000e-160 575.0
28 TraesCS7B01G415000 chr6A 96.154 52 2 0 308 359 535993191 535993242 4.300000e-13 86.1
29 TraesCS7B01G415000 chr4A 86.364 528 67 4 1904 2426 69306110 69305583 2.710000e-159 571.0
30 TraesCS7B01G415000 chr3B 86.338 527 67 4 1905 2426 27513583 27514109 9.730000e-159 569.0
31 TraesCS7B01G415000 chr1B 86.148 527 68 4 1905 2426 453521964 453522490 4.530000e-157 564.0
32 TraesCS7B01G415000 chr5A 76.817 289 49 10 119 396 11078020 11077739 1.940000e-31 147.0
33 TraesCS7B01G415000 chr5A 83.824 68 5 6 148 210 408188369 408188303 2.600000e-05 60.2
34 TraesCS7B01G415000 chr4D 86.047 129 17 1 244 372 11147461 11147588 1.170000e-28 137.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G415000 chr7B 682884959 682887384 2425 True 4481.0 4481 100.0000 1 2426 1 chr7B.!!$R2 2425
1 TraesCS7B01G415000 chr7B 681750566 681751071 505 False 429.0 429 82.4950 1006 1527 1 chr7B.!!$F2 521
2 TraesCS7B01G415000 chr7B 682790966 682791911 945 True 317.5 444 81.4165 533 1414 2 chr7B.!!$R3 881
3 TraesCS7B01G415000 chr7D 602196502 602197689 1187 False 1262.0 1262 86.4750 464 1632 1 chr7D.!!$F3 1168
4 TraesCS7B01G415000 chr7D 602042849 602043481 632 False 538.0 538 82.8890 971 1574 1 chr7D.!!$F1 603
5 TraesCS7B01G415000 chr7D 602072543 602073448 905 False 527.0 527 78.2890 691 1573 1 chr7D.!!$F2 882
6 TraesCS7B01G415000 chr7D 602294483 602295446 963 True 521.0 521 77.8660 539 1470 1 chr7D.!!$R2 931
7 TraesCS7B01G415000 chr7D 602409292 602410412 1120 True 356.0 486 80.3525 513 1525 2 chr7D.!!$R3 1012
8 TraesCS7B01G415000 chr7A 694092678 694093860 1182 True 687.5 1055 86.0785 245 1517 2 chr7A.!!$R2 1272
9 TraesCS7B01G415000 chr7A 10422945 10423475 530 False 584.0 584 86.6540 1900 2426 1 chr7A.!!$F1 526
10 TraesCS7B01G415000 chr7A 693838280 693839156 876 False 293.0 473 79.8100 691 1520 2 chr7A.!!$F3 829
11 TraesCS7B01G415000 chrUn 87231777 87232659 882 True 641.0 641 80.8860 692 1564 1 chrUn.!!$R1 872
12 TraesCS7B01G415000 chr3D 56362067 56362592 525 True 586.0 586 86.8820 1905 2426 1 chr3D.!!$R1 521
13 TraesCS7B01G415000 chr2A 26932657 26933183 526 True 580.0 580 86.7170 1905 2426 1 chr2A.!!$R1 521
14 TraesCS7B01G415000 chr2A 138922380 138922906 526 False 575.0 575 86.5280 1905 2426 1 chr2A.!!$F1 521
15 TraesCS7B01G415000 chr2D 645665841 645666369 528 True 579.0 579 86.5780 1904 2426 1 chr2D.!!$R1 522
16 TraesCS7B01G415000 chr6A 590370890 590371416 526 False 575.0 575 86.5280 1905 2426 1 chr6A.!!$F2 521
17 TraesCS7B01G415000 chr4A 69305583 69306110 527 True 571.0 571 86.3640 1904 2426 1 chr4A.!!$R1 522
18 TraesCS7B01G415000 chr3B 27513583 27514109 526 False 569.0 569 86.3380 1905 2426 1 chr3B.!!$F1 521
19 TraesCS7B01G415000 chr1B 453521964 453522490 526 False 564.0 564 86.1480 1905 2426 1 chr1B.!!$F1 521

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
372 376 0.039617 GTTGCACCGCACAAGCATTA 60.04 50.0 0.0 0.0 38.71 1.9 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1752 2063 0.034756 CAGATCACAACCACCGTCCA 59.965 55.0 0.0 0.0 0.0 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 5.381174 TTTCTCATGAAATTGGACAGCAG 57.619 39.130 0.00 0.00 37.27 4.24
32 33 4.290711 TCTCATGAAATTGGACAGCAGA 57.709 40.909 0.00 0.00 0.00 4.26
33 34 4.851843 TCTCATGAAATTGGACAGCAGAT 58.148 39.130 0.00 0.00 0.00 2.90
34 35 5.993055 TCTCATGAAATTGGACAGCAGATA 58.007 37.500 0.00 0.00 0.00 1.98
35 36 6.053650 TCTCATGAAATTGGACAGCAGATAG 58.946 40.000 0.00 0.00 0.00 2.08
36 37 5.748402 TCATGAAATTGGACAGCAGATAGT 58.252 37.500 0.00 0.00 0.00 2.12
37 38 5.587443 TCATGAAATTGGACAGCAGATAGTG 59.413 40.000 0.00 0.00 0.00 2.74
38 39 4.910195 TGAAATTGGACAGCAGATAGTGT 58.090 39.130 0.00 0.00 0.00 3.55
39 40 6.048732 TGAAATTGGACAGCAGATAGTGTA 57.951 37.500 0.00 0.00 0.00 2.90
40 41 6.653020 TGAAATTGGACAGCAGATAGTGTAT 58.347 36.000 0.00 0.00 0.00 2.29
41 42 6.539826 TGAAATTGGACAGCAGATAGTGTATG 59.460 38.462 0.00 0.00 0.00 2.39
42 43 5.620738 ATTGGACAGCAGATAGTGTATGT 57.379 39.130 0.00 0.00 32.69 2.29
43 44 6.731292 ATTGGACAGCAGATAGTGTATGTA 57.269 37.500 0.00 0.00 30.86 2.29
44 45 6.731292 TTGGACAGCAGATAGTGTATGTAT 57.269 37.500 0.00 0.00 30.86 2.29
45 46 7.833285 TTGGACAGCAGATAGTGTATGTATA 57.167 36.000 0.00 0.00 30.86 1.47
46 47 7.833285 TGGACAGCAGATAGTGTATGTATAA 57.167 36.000 0.00 0.00 30.86 0.98
47 48 7.886338 TGGACAGCAGATAGTGTATGTATAAG 58.114 38.462 0.00 0.00 30.86 1.73
48 49 7.039714 TGGACAGCAGATAGTGTATGTATAAGG 60.040 40.741 0.00 0.00 30.86 2.69
49 50 7.039644 GGACAGCAGATAGTGTATGTATAAGGT 60.040 40.741 0.00 0.00 30.86 3.50
50 51 7.661968 ACAGCAGATAGTGTATGTATAAGGTG 58.338 38.462 0.00 0.00 0.00 4.00
51 52 7.093354 CAGCAGATAGTGTATGTATAAGGTGG 58.907 42.308 0.00 0.00 0.00 4.61
52 53 6.782988 AGCAGATAGTGTATGTATAAGGTGGT 59.217 38.462 0.00 0.00 0.00 4.16
53 54 7.039644 AGCAGATAGTGTATGTATAAGGTGGTC 60.040 40.741 0.00 0.00 0.00 4.02
54 55 7.603651 CAGATAGTGTATGTATAAGGTGGTCC 58.396 42.308 0.00 0.00 0.00 4.46
55 56 6.724905 AGATAGTGTATGTATAAGGTGGTCCC 59.275 42.308 0.00 0.00 0.00 4.46
57 58 6.034442 AGTGTATGTATAAGGTGGTCCCTA 57.966 41.667 0.00 0.00 45.47 3.53
58 59 6.631107 AGTGTATGTATAAGGTGGTCCCTAT 58.369 40.000 0.00 0.00 45.47 2.57
59 60 6.497259 AGTGTATGTATAAGGTGGTCCCTATG 59.503 42.308 0.00 0.00 45.47 2.23
60 61 4.910458 ATGTATAAGGTGGTCCCTATGC 57.090 45.455 0.00 0.00 45.47 3.14
61 62 3.936461 TGTATAAGGTGGTCCCTATGCT 58.064 45.455 0.00 0.00 45.47 3.79
62 63 3.646162 TGTATAAGGTGGTCCCTATGCTG 59.354 47.826 0.00 0.00 45.47 4.41
63 64 2.561209 TAAGGTGGTCCCTATGCTGA 57.439 50.000 0.00 0.00 45.47 4.26
64 65 1.898863 AAGGTGGTCCCTATGCTGAT 58.101 50.000 0.00 0.00 45.47 2.90
65 66 1.898863 AGGTGGTCCCTATGCTGATT 58.101 50.000 0.00 0.00 43.87 2.57
66 67 1.492176 AGGTGGTCCCTATGCTGATTG 59.508 52.381 0.00 0.00 43.87 2.67
67 68 1.212935 GGTGGTCCCTATGCTGATTGT 59.787 52.381 0.00 0.00 0.00 2.71
68 69 2.565841 GTGGTCCCTATGCTGATTGTC 58.434 52.381 0.00 0.00 0.00 3.18
69 70 1.490490 TGGTCCCTATGCTGATTGTCC 59.510 52.381 0.00 0.00 0.00 4.02
70 71 1.202818 GGTCCCTATGCTGATTGTCCC 60.203 57.143 0.00 0.00 0.00 4.46
71 72 1.771255 GTCCCTATGCTGATTGTCCCT 59.229 52.381 0.00 0.00 0.00 4.20
72 73 2.972713 GTCCCTATGCTGATTGTCCCTA 59.027 50.000 0.00 0.00 0.00 3.53
73 74 3.584848 GTCCCTATGCTGATTGTCCCTAT 59.415 47.826 0.00 0.00 0.00 2.57
74 75 3.584406 TCCCTATGCTGATTGTCCCTATG 59.416 47.826 0.00 0.00 0.00 2.23
75 76 3.341823 CCTATGCTGATTGTCCCTATGC 58.658 50.000 0.00 0.00 0.00 3.14
76 77 3.008813 CCTATGCTGATTGTCCCTATGCT 59.991 47.826 0.00 0.00 0.00 3.79
77 78 2.336945 TGCTGATTGTCCCTATGCTG 57.663 50.000 0.00 0.00 0.00 4.41
78 79 1.839354 TGCTGATTGTCCCTATGCTGA 59.161 47.619 0.00 0.00 0.00 4.26
79 80 2.440627 TGCTGATTGTCCCTATGCTGAT 59.559 45.455 0.00 0.00 0.00 2.90
80 81 3.647590 TGCTGATTGTCCCTATGCTGATA 59.352 43.478 0.00 0.00 0.00 2.15
81 82 3.999663 GCTGATTGTCCCTATGCTGATAC 59.000 47.826 0.00 0.00 0.00 2.24
82 83 4.573900 CTGATTGTCCCTATGCTGATACC 58.426 47.826 0.00 0.00 0.00 2.73
83 84 3.973305 TGATTGTCCCTATGCTGATACCA 59.027 43.478 0.00 0.00 0.00 3.25
84 85 4.598807 TGATTGTCCCTATGCTGATACCAT 59.401 41.667 0.00 0.00 0.00 3.55
85 86 5.784906 TGATTGTCCCTATGCTGATACCATA 59.215 40.000 0.00 0.00 0.00 2.74
86 87 6.444816 TGATTGTCCCTATGCTGATACCATAT 59.555 38.462 0.00 0.00 0.00 1.78
87 88 7.623278 TGATTGTCCCTATGCTGATACCATATA 59.377 37.037 0.00 0.00 0.00 0.86
88 89 7.995052 TTGTCCCTATGCTGATACCATATAT 57.005 36.000 0.00 0.00 0.00 0.86
89 90 9.674705 ATTGTCCCTATGCTGATACCATATATA 57.325 33.333 0.00 0.00 0.00 0.86
90 91 9.500701 TTGTCCCTATGCTGATACCATATATAA 57.499 33.333 0.00 0.00 0.00 0.98
91 92 9.500701 TGTCCCTATGCTGATACCATATATAAA 57.499 33.333 0.00 0.00 0.00 1.40
115 116 7.962995 ATGTTTCTCTATCTCTTCTGTACCA 57.037 36.000 0.00 0.00 0.00 3.25
116 117 7.776618 TGTTTCTCTATCTCTTCTGTACCAA 57.223 36.000 0.00 0.00 0.00 3.67
117 118 8.367660 TGTTTCTCTATCTCTTCTGTACCAAT 57.632 34.615 0.00 0.00 0.00 3.16
118 119 8.816894 TGTTTCTCTATCTCTTCTGTACCAATT 58.183 33.333 0.00 0.00 0.00 2.32
127 128 8.324163 TCTCTTCTGTACCAATTAAAAAGAGC 57.676 34.615 0.00 0.00 38.75 4.09
128 129 7.117812 TCTCTTCTGTACCAATTAAAAAGAGCG 59.882 37.037 0.00 0.00 38.75 5.03
129 130 6.708949 TCTTCTGTACCAATTAAAAAGAGCGT 59.291 34.615 0.00 0.00 0.00 5.07
130 131 7.874016 TCTTCTGTACCAATTAAAAAGAGCGTA 59.126 33.333 0.00 0.00 0.00 4.42
131 132 7.966246 TCTGTACCAATTAAAAAGAGCGTAA 57.034 32.000 0.00 0.00 0.00 3.18
132 133 8.025243 TCTGTACCAATTAAAAAGAGCGTAAG 57.975 34.615 0.00 0.00 43.44 2.34
133 134 7.118680 TCTGTACCAATTAAAAAGAGCGTAAGG 59.881 37.037 0.00 0.00 38.28 2.69
146 147 3.741805 GCGTAAGGTTCTTGTTCCATC 57.258 47.619 0.00 0.00 38.28 3.51
147 148 3.335579 GCGTAAGGTTCTTGTTCCATCT 58.664 45.455 0.00 0.00 38.28 2.90
148 149 3.751698 GCGTAAGGTTCTTGTTCCATCTT 59.248 43.478 0.00 0.00 38.28 2.40
149 150 4.215613 GCGTAAGGTTCTTGTTCCATCTTT 59.784 41.667 0.00 0.00 38.28 2.52
150 151 5.410439 GCGTAAGGTTCTTGTTCCATCTTTA 59.590 40.000 0.00 0.00 38.28 1.85
151 152 6.093633 GCGTAAGGTTCTTGTTCCATCTTTAT 59.906 38.462 0.00 0.00 38.28 1.40
152 153 7.361799 GCGTAAGGTTCTTGTTCCATCTTTATT 60.362 37.037 0.00 0.00 38.28 1.40
153 154 8.175716 CGTAAGGTTCTTGTTCCATCTTTATTC 58.824 37.037 0.00 0.00 0.00 1.75
154 155 7.468141 AAGGTTCTTGTTCCATCTTTATTCC 57.532 36.000 0.00 0.00 0.00 3.01
155 156 5.952347 AGGTTCTTGTTCCATCTTTATTCCC 59.048 40.000 0.00 0.00 0.00 3.97
156 157 5.714806 GGTTCTTGTTCCATCTTTATTCCCA 59.285 40.000 0.00 0.00 0.00 4.37
157 158 6.350194 GGTTCTTGTTCCATCTTTATTCCCAC 60.350 42.308 0.00 0.00 0.00 4.61
158 159 5.261216 TCTTGTTCCATCTTTATTCCCACC 58.739 41.667 0.00 0.00 0.00 4.61
159 160 4.666412 TGTTCCATCTTTATTCCCACCA 57.334 40.909 0.00 0.00 0.00 4.17
160 161 4.340617 TGTTCCATCTTTATTCCCACCAC 58.659 43.478 0.00 0.00 0.00 4.16
161 162 3.662759 TCCATCTTTATTCCCACCACC 57.337 47.619 0.00 0.00 0.00 4.61
162 163 2.243736 TCCATCTTTATTCCCACCACCC 59.756 50.000 0.00 0.00 0.00 4.61
163 164 2.244769 CCATCTTTATTCCCACCACCCT 59.755 50.000 0.00 0.00 0.00 4.34
164 165 3.309848 CCATCTTTATTCCCACCACCCTT 60.310 47.826 0.00 0.00 0.00 3.95
165 166 4.352893 CATCTTTATTCCCACCACCCTTT 58.647 43.478 0.00 0.00 0.00 3.11
166 167 4.479156 TCTTTATTCCCACCACCCTTTT 57.521 40.909 0.00 0.00 0.00 2.27
167 168 4.156477 TCTTTATTCCCACCACCCTTTTG 58.844 43.478 0.00 0.00 0.00 2.44
168 169 3.621682 TTATTCCCACCACCCTTTTGT 57.378 42.857 0.00 0.00 0.00 2.83
169 170 2.009681 ATTCCCACCACCCTTTTGTC 57.990 50.000 0.00 0.00 0.00 3.18
170 171 0.105913 TTCCCACCACCCTTTTGTCC 60.106 55.000 0.00 0.00 0.00 4.02
171 172 1.231641 CCCACCACCCTTTTGTCCA 59.768 57.895 0.00 0.00 0.00 4.02
172 173 0.397816 CCCACCACCCTTTTGTCCAA 60.398 55.000 0.00 0.00 0.00 3.53
173 174 0.750249 CCACCACCCTTTTGTCCAAC 59.250 55.000 0.00 0.00 0.00 3.77
174 175 0.750249 CACCACCCTTTTGTCCAACC 59.250 55.000 0.00 0.00 0.00 3.77
175 176 0.634465 ACCACCCTTTTGTCCAACCT 59.366 50.000 0.00 0.00 0.00 3.50
176 177 1.007842 ACCACCCTTTTGTCCAACCTT 59.992 47.619 0.00 0.00 0.00 3.50
177 178 2.115427 CCACCCTTTTGTCCAACCTTT 58.885 47.619 0.00 0.00 0.00 3.11
178 179 2.503765 CCACCCTTTTGTCCAACCTTTT 59.496 45.455 0.00 0.00 0.00 2.27
179 180 3.707102 CCACCCTTTTGTCCAACCTTTTA 59.293 43.478 0.00 0.00 0.00 1.52
180 181 4.346709 CCACCCTTTTGTCCAACCTTTTAT 59.653 41.667 0.00 0.00 0.00 1.40
181 182 5.540719 CCACCCTTTTGTCCAACCTTTTATA 59.459 40.000 0.00 0.00 0.00 0.98
182 183 6.212589 CCACCCTTTTGTCCAACCTTTTATAT 59.787 38.462 0.00 0.00 0.00 0.86
183 184 7.397761 CCACCCTTTTGTCCAACCTTTTATATA 59.602 37.037 0.00 0.00 0.00 0.86
184 185 8.808092 CACCCTTTTGTCCAACCTTTTATATAA 58.192 33.333 0.00 0.00 0.00 0.98
185 186 9.555411 ACCCTTTTGTCCAACCTTTTATATAAT 57.445 29.630 0.00 0.00 0.00 1.28
269 270 8.698973 TCAAAACATAAGGTAAATCAAGGACA 57.301 30.769 0.00 0.00 0.00 4.02
270 271 9.308000 TCAAAACATAAGGTAAATCAAGGACAT 57.692 29.630 0.00 0.00 0.00 3.06
271 272 9.357652 CAAAACATAAGGTAAATCAAGGACATG 57.642 33.333 0.00 0.00 0.00 3.21
299 303 9.613957 TTTGATAAACATTTATGTACACAACCG 57.386 29.630 0.00 0.00 40.80 4.44
300 304 8.325421 TGATAAACATTTATGTACACAACCGT 57.675 30.769 0.00 0.00 40.80 4.83
306 310 8.500753 ACATTTATGTACACAACCGTATGAAT 57.499 30.769 0.00 0.00 39.68 2.57
311 315 6.223351 TGTACACAACCGTATGAATATGGA 57.777 37.500 14.27 0.00 41.06 3.41
372 376 0.039617 GTTGCACCGCACAAGCATTA 60.040 50.000 0.00 0.00 38.71 1.90
376 380 1.382522 CACCGCACAAGCATTATCCT 58.617 50.000 0.00 0.00 42.27 3.24
379 383 2.170607 ACCGCACAAGCATTATCCTAGT 59.829 45.455 0.00 0.00 42.27 2.57
495 506 4.927782 GCCATGGTGCGCCGGATA 62.928 66.667 14.67 0.00 37.67 2.59
499 510 1.004560 ATGGTGCGCCGGATAGATG 60.005 57.895 12.58 0.00 37.67 2.90
526 551 2.649816 GGCCAGGGGATGTATTTATCCT 59.350 50.000 0.00 0.00 44.90 3.24
563 588 0.318120 GGTCAATTGTTGGGTGCTGG 59.682 55.000 5.13 0.00 0.00 4.85
564 589 1.327303 GTCAATTGTTGGGTGCTGGA 58.673 50.000 5.13 0.00 0.00 3.86
599 630 8.467402 AACACAAATTTTACATCACGTGAAAA 57.533 26.923 24.13 18.11 36.75 2.29
600 631 8.467402 ACACAAATTTTACATCACGTGAAAAA 57.533 26.923 24.13 22.93 36.75 1.94
799 909 2.114411 GAGCCGAACCCCAACCAA 59.886 61.111 0.00 0.00 0.00 3.67
826 947 2.766229 GCCTCCTCCACCTCCTCC 60.766 72.222 0.00 0.00 0.00 4.30
830 951 0.105913 CTCCTCCACCTCCTCCCTAC 60.106 65.000 0.00 0.00 0.00 3.18
876 1024 3.592059 CATTCCAAGTTTCCAGCCATTG 58.408 45.455 0.00 0.00 0.00 2.82
919 1067 0.249120 AGCGAACATCACATCCGGAA 59.751 50.000 9.01 0.00 0.00 4.30
1302 1588 2.171237 CCAGAGGGTGATGAGCAACATA 59.829 50.000 0.00 0.00 39.56 2.29
1309 1595 2.107366 TGATGAGCAACATACGGGAGA 58.893 47.619 0.00 0.00 39.56 3.71
1377 1663 2.821366 GACCTCGACCGCTACCGA 60.821 66.667 0.00 0.00 36.29 4.69
1422 1708 1.734477 CGACTGGTTCGCAGACCTG 60.734 63.158 9.83 9.83 41.87 4.00
1527 1826 2.755103 GTTTTATTGTGGAGGGGAGCTG 59.245 50.000 0.00 0.00 0.00 4.24
1529 1828 1.635817 TATTGTGGAGGGGAGCTGGC 61.636 60.000 0.00 0.00 0.00 4.85
1539 1838 0.315568 GGGAGCTGGCGATGTAGTAG 59.684 60.000 0.00 0.00 0.00 2.57
1544 1855 3.983741 AGCTGGCGATGTAGTAGAAATC 58.016 45.455 0.00 0.00 0.00 2.17
1581 1892 6.628856 CGATTGTAATTCGAACATGTCCATTC 59.371 38.462 0.00 0.00 0.00 2.67
1590 1901 2.738743 ACATGTCCATTCCCATTCCAC 58.261 47.619 0.00 0.00 0.00 4.02
1605 1916 5.010314 CCCATTCCACTCCATTGTGAATATG 59.990 44.000 0.00 0.00 40.12 1.78
1608 1919 7.147863 CCATTCCACTCCATTGTGAATATGAAA 60.148 37.037 0.00 0.00 40.12 2.69
1615 1926 4.495679 CCATTGTGAATATGAAACCGTCGG 60.496 45.833 10.48 10.48 0.00 4.79
1623 1934 3.899052 ATGAAACCGTCGGAGGAATTA 57.101 42.857 20.51 0.00 34.73 1.40
1626 1937 4.581868 TGAAACCGTCGGAGGAATTAATT 58.418 39.130 20.51 0.00 34.73 1.40
1627 1938 5.732633 TGAAACCGTCGGAGGAATTAATTA 58.267 37.500 20.51 0.00 34.73 1.40
1628 1939 6.171921 TGAAACCGTCGGAGGAATTAATTAA 58.828 36.000 20.51 0.00 34.73 1.40
1630 1941 7.337436 TGAAACCGTCGGAGGAATTAATTAAAT 59.663 33.333 20.51 0.00 34.73 1.40
1631 1942 6.856135 ACCGTCGGAGGAATTAATTAAATC 57.144 37.500 20.51 3.29 34.73 2.17
1632 1943 6.589135 ACCGTCGGAGGAATTAATTAAATCT 58.411 36.000 20.51 5.83 34.73 2.40
1633 1944 6.482308 ACCGTCGGAGGAATTAATTAAATCTG 59.518 38.462 20.51 5.20 34.73 2.90
1634 1945 6.704493 CCGTCGGAGGAATTAATTAAATCTGA 59.296 38.462 4.91 7.31 0.00 3.27
1635 1946 7.225931 CCGTCGGAGGAATTAATTAAATCTGAA 59.774 37.037 4.91 3.62 0.00 3.02
1636 1947 8.774586 CGTCGGAGGAATTAATTAAATCTGAAT 58.225 33.333 11.99 0.00 0.00 2.57
1649 1960 9.699410 AATTAAATCTGAATTATGTCACAGGGA 57.301 29.630 0.00 0.00 0.00 4.20
1666 1977 2.265589 GGACTCCCCTTTCGTTTTCA 57.734 50.000 0.00 0.00 0.00 2.69
1667 1978 2.152016 GGACTCCCCTTTCGTTTTCAG 58.848 52.381 0.00 0.00 0.00 3.02
1668 1979 2.486727 GGACTCCCCTTTCGTTTTCAGT 60.487 50.000 0.00 0.00 0.00 3.41
1669 1980 2.548480 GACTCCCCTTTCGTTTTCAGTG 59.452 50.000 0.00 0.00 0.00 3.66
1670 1981 2.171870 ACTCCCCTTTCGTTTTCAGTGA 59.828 45.455 0.00 0.00 0.00 3.41
1671 1982 3.181443 ACTCCCCTTTCGTTTTCAGTGAT 60.181 43.478 0.00 0.00 0.00 3.06
1672 1983 4.041198 ACTCCCCTTTCGTTTTCAGTGATA 59.959 41.667 0.00 0.00 0.00 2.15
1673 1984 4.575885 TCCCCTTTCGTTTTCAGTGATAG 58.424 43.478 0.00 0.00 0.00 2.08
1674 1985 4.041198 TCCCCTTTCGTTTTCAGTGATAGT 59.959 41.667 0.00 0.00 0.00 2.12
1675 1986 4.154195 CCCCTTTCGTTTTCAGTGATAGTG 59.846 45.833 0.00 0.00 0.00 2.74
1676 1987 4.154195 CCCTTTCGTTTTCAGTGATAGTGG 59.846 45.833 0.00 0.00 0.00 4.00
1677 1988 4.378459 CCTTTCGTTTTCAGTGATAGTGGC 60.378 45.833 0.00 0.00 0.00 5.01
1678 1989 3.394674 TCGTTTTCAGTGATAGTGGCA 57.605 42.857 0.00 0.00 0.00 4.92
1679 1990 3.064207 TCGTTTTCAGTGATAGTGGCAC 58.936 45.455 10.29 10.29 36.53 5.01
1680 1991 2.159627 CGTTTTCAGTGATAGTGGCACC 59.840 50.000 15.27 0.00 36.95 5.01
1681 1992 2.093306 TTTCAGTGATAGTGGCACCG 57.907 50.000 15.27 0.00 36.95 4.94
1682 1993 1.262417 TTCAGTGATAGTGGCACCGA 58.738 50.000 15.27 2.68 36.95 4.69
1683 1994 0.817654 TCAGTGATAGTGGCACCGAG 59.182 55.000 15.27 0.00 36.95 4.63
1684 1995 0.179100 CAGTGATAGTGGCACCGAGG 60.179 60.000 15.27 0.00 36.95 4.63
1685 1996 1.521681 GTGATAGTGGCACCGAGGC 60.522 63.158 15.27 0.25 44.50 4.70
1693 2004 4.314440 GCACCGAGGCACTGACCA 62.314 66.667 0.00 0.00 41.55 4.02
1694 2005 2.357517 CACCGAGGCACTGACCAC 60.358 66.667 0.00 0.00 41.55 4.16
1695 2006 2.524394 ACCGAGGCACTGACCACT 60.524 61.111 0.00 0.00 41.55 4.00
1696 2007 2.047844 CCGAGGCACTGACCACTG 60.048 66.667 0.00 0.00 41.55 3.66
1697 2008 2.047844 CGAGGCACTGACCACTGG 60.048 66.667 0.00 0.00 41.55 4.00
1698 2009 2.574018 CGAGGCACTGACCACTGGA 61.574 63.158 0.71 0.00 41.55 3.86
1699 2010 1.892819 CGAGGCACTGACCACTGGAT 61.893 60.000 0.71 0.00 41.55 3.41
1700 2011 0.392193 GAGGCACTGACCACTGGATG 60.392 60.000 0.71 0.00 41.55 3.51
1701 2012 1.130054 AGGCACTGACCACTGGATGT 61.130 55.000 0.71 0.00 37.18 3.06
1702 2013 0.613260 GGCACTGACCACTGGATGTA 59.387 55.000 0.71 0.00 0.00 2.29
1703 2014 1.210478 GGCACTGACCACTGGATGTAT 59.790 52.381 0.71 0.00 0.00 2.29
1704 2015 2.283298 GCACTGACCACTGGATGTATG 58.717 52.381 0.71 0.00 0.00 2.39
1705 2016 2.355108 GCACTGACCACTGGATGTATGT 60.355 50.000 0.71 0.00 0.00 2.29
1706 2017 3.525537 CACTGACCACTGGATGTATGTC 58.474 50.000 0.71 0.00 33.09 3.06
1707 2018 3.196469 CACTGACCACTGGATGTATGTCT 59.804 47.826 0.71 0.00 33.43 3.41
1708 2019 4.402474 CACTGACCACTGGATGTATGTCTA 59.598 45.833 0.71 0.00 33.43 2.59
1709 2020 5.069648 CACTGACCACTGGATGTATGTCTAT 59.930 44.000 0.71 0.00 33.43 1.98
1710 2021 5.663106 ACTGACCACTGGATGTATGTCTATT 59.337 40.000 0.71 0.00 33.43 1.73
1711 2022 6.161855 TGACCACTGGATGTATGTCTATTC 57.838 41.667 0.71 0.00 33.43 1.75
1712 2023 5.201713 ACCACTGGATGTATGTCTATTCG 57.798 43.478 0.71 0.00 0.00 3.34
1713 2024 4.893524 ACCACTGGATGTATGTCTATTCGA 59.106 41.667 0.71 0.00 0.00 3.71
1714 2025 5.010112 ACCACTGGATGTATGTCTATTCGAG 59.990 44.000 0.71 0.00 0.00 4.04
1715 2026 4.920340 CACTGGATGTATGTCTATTCGAGC 59.080 45.833 0.00 0.00 0.00 5.03
1716 2027 4.584743 ACTGGATGTATGTCTATTCGAGCA 59.415 41.667 0.00 0.00 0.00 4.26
1717 2028 5.126396 TGGATGTATGTCTATTCGAGCAG 57.874 43.478 0.00 0.00 0.00 4.24
1718 2029 4.584743 TGGATGTATGTCTATTCGAGCAGT 59.415 41.667 0.00 0.00 0.00 4.40
1719 2030 4.920340 GGATGTATGTCTATTCGAGCAGTG 59.080 45.833 0.00 0.00 0.00 3.66
1720 2031 3.706698 TGTATGTCTATTCGAGCAGTGC 58.293 45.455 7.13 7.13 0.00 4.40
1721 2032 3.381590 TGTATGTCTATTCGAGCAGTGCT 59.618 43.478 19.86 19.86 43.88 4.40
1722 2033 4.578928 TGTATGTCTATTCGAGCAGTGCTA 59.421 41.667 19.77 2.38 39.88 3.49
1723 2034 4.655762 ATGTCTATTCGAGCAGTGCTAA 57.344 40.909 19.77 10.48 39.88 3.09
1724 2035 4.450082 TGTCTATTCGAGCAGTGCTAAA 57.550 40.909 19.77 15.83 39.88 1.85
1725 2036 5.011090 TGTCTATTCGAGCAGTGCTAAAT 57.989 39.130 19.77 21.29 39.88 1.40
1726 2037 4.805719 TGTCTATTCGAGCAGTGCTAAATG 59.194 41.667 25.01 17.82 39.88 2.32
1727 2038 4.210120 GTCTATTCGAGCAGTGCTAAATGG 59.790 45.833 25.01 22.98 39.88 3.16
1728 2039 2.760634 TTCGAGCAGTGCTAAATGGA 57.239 45.000 19.77 7.85 39.88 3.41
1729 2040 2.010145 TCGAGCAGTGCTAAATGGAC 57.990 50.000 19.77 2.29 39.88 4.02
1730 2041 0.647410 CGAGCAGTGCTAAATGGACG 59.353 55.000 19.77 11.74 39.88 4.79
1731 2042 1.735700 CGAGCAGTGCTAAATGGACGA 60.736 52.381 19.77 0.00 39.88 4.20
1732 2043 2.555199 GAGCAGTGCTAAATGGACGAT 58.445 47.619 19.77 0.00 39.88 3.73
1733 2044 3.717707 GAGCAGTGCTAAATGGACGATA 58.282 45.455 19.77 0.00 39.88 2.92
1734 2045 3.722147 AGCAGTGCTAAATGGACGATAG 58.278 45.455 18.11 0.00 42.15 2.08
1736 2047 4.383118 AGCAGTGCTAAATGGACGATAGTT 60.383 41.667 18.11 0.00 45.00 2.24
1737 2048 6.193519 AGCAGTGCTAAATGGACGATAGTTC 61.194 44.000 18.11 0.00 45.00 3.01
1750 2061 3.849911 CGATAGTTCATGCCCGATATGT 58.150 45.455 0.00 0.00 0.00 2.29
1751 2062 3.614176 CGATAGTTCATGCCCGATATGTG 59.386 47.826 0.00 0.00 0.00 3.21
1752 2063 4.569943 GATAGTTCATGCCCGATATGTGT 58.430 43.478 0.00 0.00 0.00 3.72
1753 2064 2.564771 AGTTCATGCCCGATATGTGTG 58.435 47.619 0.00 0.00 0.00 3.82
1754 2065 1.603802 GTTCATGCCCGATATGTGTGG 59.396 52.381 0.00 0.00 0.00 4.17
1755 2066 1.127343 TCATGCCCGATATGTGTGGA 58.873 50.000 0.00 0.00 0.00 4.02
1756 2067 1.202639 TCATGCCCGATATGTGTGGAC 60.203 52.381 0.00 0.00 0.00 4.02
1757 2068 0.249868 ATGCCCGATATGTGTGGACG 60.250 55.000 0.00 0.00 0.00 4.79
1758 2069 1.594293 GCCCGATATGTGTGGACGG 60.594 63.158 0.00 0.00 42.67 4.79
1759 2070 1.820581 CCCGATATGTGTGGACGGT 59.179 57.895 0.00 0.00 41.67 4.83
1760 2071 0.529773 CCCGATATGTGTGGACGGTG 60.530 60.000 0.00 0.00 41.67 4.94
1761 2072 0.529773 CCGATATGTGTGGACGGTGG 60.530 60.000 0.00 0.00 38.97 4.61
1762 2073 0.174845 CGATATGTGTGGACGGTGGT 59.825 55.000 0.00 0.00 0.00 4.16
1763 2074 1.404986 CGATATGTGTGGACGGTGGTT 60.405 52.381 0.00 0.00 0.00 3.67
1764 2075 2.006888 GATATGTGTGGACGGTGGTTG 58.993 52.381 0.00 0.00 0.00 3.77
1765 2076 0.759959 TATGTGTGGACGGTGGTTGT 59.240 50.000 0.00 0.00 0.00 3.32
1766 2077 0.817634 ATGTGTGGACGGTGGTTGTG 60.818 55.000 0.00 0.00 0.00 3.33
1767 2078 1.153329 GTGTGGACGGTGGTTGTGA 60.153 57.895 0.00 0.00 0.00 3.58
1768 2079 0.534203 GTGTGGACGGTGGTTGTGAT 60.534 55.000 0.00 0.00 0.00 3.06
1769 2080 0.250124 TGTGGACGGTGGTTGTGATC 60.250 55.000 0.00 0.00 0.00 2.92
1770 2081 0.034896 GTGGACGGTGGTTGTGATCT 59.965 55.000 0.00 0.00 0.00 2.75
1771 2082 0.034756 TGGACGGTGGTTGTGATCTG 59.965 55.000 0.00 0.00 0.00 2.90
1772 2083 0.320374 GGACGGTGGTTGTGATCTGA 59.680 55.000 0.00 0.00 0.00 3.27
1773 2084 1.429463 GACGGTGGTTGTGATCTGAC 58.571 55.000 0.00 0.00 0.00 3.51
1774 2085 0.034896 ACGGTGGTTGTGATCTGACC 59.965 55.000 0.00 0.02 0.00 4.02
1775 2086 0.673644 CGGTGGTTGTGATCTGACCC 60.674 60.000 9.30 0.00 32.39 4.46
1776 2087 0.693049 GGTGGTTGTGATCTGACCCT 59.307 55.000 9.30 0.00 32.39 4.34
1777 2088 1.906574 GGTGGTTGTGATCTGACCCTA 59.093 52.381 9.30 0.00 32.39 3.53
1778 2089 2.354805 GGTGGTTGTGATCTGACCCTAC 60.355 54.545 9.30 3.70 32.39 3.18
1779 2090 2.301870 GTGGTTGTGATCTGACCCTACA 59.698 50.000 9.30 0.00 32.39 2.74
1780 2091 3.055094 GTGGTTGTGATCTGACCCTACAT 60.055 47.826 9.30 0.00 32.39 2.29
1781 2092 3.197766 TGGTTGTGATCTGACCCTACATC 59.802 47.826 9.30 0.00 32.39 3.06
1782 2093 3.197766 GGTTGTGATCTGACCCTACATCA 59.802 47.826 0.00 0.00 0.00 3.07
1783 2094 4.141620 GGTTGTGATCTGACCCTACATCAT 60.142 45.833 0.00 0.00 0.00 2.45
1784 2095 5.431765 GTTGTGATCTGACCCTACATCATT 58.568 41.667 0.00 0.00 0.00 2.57
1785 2096 5.698741 TGTGATCTGACCCTACATCATTT 57.301 39.130 0.00 0.00 0.00 2.32
1786 2097 5.430886 TGTGATCTGACCCTACATCATTTG 58.569 41.667 0.00 0.00 0.00 2.32
1787 2098 4.818546 GTGATCTGACCCTACATCATTTGG 59.181 45.833 0.00 0.00 0.00 3.28
1788 2099 3.931907 TCTGACCCTACATCATTTGGG 57.068 47.619 0.00 0.00 44.89 4.12
1789 2100 2.092429 TCTGACCCTACATCATTTGGGC 60.092 50.000 0.00 0.00 43.25 5.36
1790 2101 1.638070 TGACCCTACATCATTTGGGCA 59.362 47.619 0.00 0.00 43.25 5.36
1791 2102 2.024414 GACCCTACATCATTTGGGCAC 58.976 52.381 0.00 0.00 43.25 5.01
1812 2123 3.826729 ACCATTGGTGAAAGTAAAGAGCC 59.173 43.478 7.76 0.00 32.98 4.70
1813 2124 3.193479 CCATTGGTGAAAGTAAAGAGCCC 59.807 47.826 0.00 0.00 0.00 5.19
1814 2125 3.586470 TTGGTGAAAGTAAAGAGCCCA 57.414 42.857 0.00 0.00 0.00 5.36
1815 2126 3.806949 TGGTGAAAGTAAAGAGCCCAT 57.193 42.857 0.00 0.00 0.00 4.00
1816 2127 4.112634 TGGTGAAAGTAAAGAGCCCATT 57.887 40.909 0.00 0.00 0.00 3.16
1817 2128 4.479158 TGGTGAAAGTAAAGAGCCCATTT 58.521 39.130 0.00 0.00 0.00 2.32
1818 2129 4.898861 TGGTGAAAGTAAAGAGCCCATTTT 59.101 37.500 0.00 0.00 0.00 1.82
1819 2130 6.071984 TGGTGAAAGTAAAGAGCCCATTTTA 58.928 36.000 0.00 0.00 0.00 1.52
1820 2131 6.551601 TGGTGAAAGTAAAGAGCCCATTTTAA 59.448 34.615 0.00 0.00 0.00 1.52
1821 2132 7.090808 GGTGAAAGTAAAGAGCCCATTTTAAG 58.909 38.462 0.00 0.00 0.00 1.85
1822 2133 7.255836 GGTGAAAGTAAAGAGCCCATTTTAAGT 60.256 37.037 0.00 0.00 0.00 2.24
1823 2134 8.141909 GTGAAAGTAAAGAGCCCATTTTAAGTT 58.858 33.333 0.00 0.00 0.00 2.66
1824 2135 8.141268 TGAAAGTAAAGAGCCCATTTTAAGTTG 58.859 33.333 0.00 0.00 0.00 3.16
1825 2136 6.025749 AGTAAAGAGCCCATTTTAAGTTGC 57.974 37.500 0.00 0.00 0.00 4.17
1826 2137 3.575965 AAGAGCCCATTTTAAGTTGCG 57.424 42.857 0.00 0.00 0.00 4.85
1827 2138 1.202348 AGAGCCCATTTTAAGTTGCGC 59.798 47.619 0.00 0.00 0.00 6.09
1828 2139 0.965439 AGCCCATTTTAAGTTGCGCA 59.035 45.000 5.66 5.66 0.00 6.09
1829 2140 1.550072 AGCCCATTTTAAGTTGCGCAT 59.450 42.857 12.75 0.00 0.00 4.73
1830 2141 1.660104 GCCCATTTTAAGTTGCGCATG 59.340 47.619 12.75 3.15 0.00 4.06
1831 2142 2.673610 GCCCATTTTAAGTTGCGCATGA 60.674 45.455 12.75 0.00 0.00 3.07
1832 2143 3.181397 CCCATTTTAAGTTGCGCATGAG 58.819 45.455 12.75 0.00 0.00 2.90
1833 2144 2.599973 CCATTTTAAGTTGCGCATGAGC 59.400 45.455 12.75 15.17 37.71 4.26
1834 2145 2.346099 TTTTAAGTTGCGCATGAGCC 57.654 45.000 19.19 4.22 37.52 4.70
1835 2146 1.242989 TTTAAGTTGCGCATGAGCCA 58.757 45.000 19.19 4.83 37.52 4.75
1836 2147 0.804364 TTAAGTTGCGCATGAGCCAG 59.196 50.000 19.19 0.00 37.52 4.85
1837 2148 1.026182 TAAGTTGCGCATGAGCCAGG 61.026 55.000 19.19 0.00 37.52 4.45
1838 2149 3.058160 GTTGCGCATGAGCCAGGT 61.058 61.111 19.19 0.00 37.52 4.00
1839 2150 2.282391 TTGCGCATGAGCCAGGTT 60.282 55.556 19.19 0.00 37.52 3.50
1840 2151 2.628696 TTGCGCATGAGCCAGGTTG 61.629 57.895 19.19 0.00 37.52 3.77
1841 2152 3.818787 GCGCATGAGCCAGGTTGG 61.819 66.667 10.72 0.00 41.55 3.77
1842 2153 2.360350 CGCATGAGCCAGGTTGGT 60.360 61.111 0.00 0.00 40.46 3.67
1843 2154 2.693762 CGCATGAGCCAGGTTGGTG 61.694 63.158 0.00 0.00 40.46 4.17
1844 2155 1.604593 GCATGAGCCAGGTTGGTGT 60.605 57.895 0.00 0.00 40.46 4.16
1845 2156 1.181098 GCATGAGCCAGGTTGGTGTT 61.181 55.000 0.00 0.00 40.46 3.32
1846 2157 1.886222 GCATGAGCCAGGTTGGTGTTA 60.886 52.381 0.00 0.00 40.46 2.41
1847 2158 1.812571 CATGAGCCAGGTTGGTGTTAC 59.187 52.381 0.00 0.00 40.46 2.50
1848 2159 0.109723 TGAGCCAGGTTGGTGTTACC 59.890 55.000 0.00 0.00 40.46 2.85
1862 2173 6.662865 TGGTGTTACCATTGATCAAAACAT 57.337 33.333 20.60 7.97 44.79 2.71
1863 2174 6.686630 TGGTGTTACCATTGATCAAAACATC 58.313 36.000 20.60 20.32 44.79 3.06
1864 2175 5.799936 GGTGTTACCATTGATCAAAACATCG 59.200 40.000 20.60 6.14 38.42 3.84
1865 2176 5.286082 GTGTTACCATTGATCAAAACATCGC 59.714 40.000 20.60 9.23 0.00 4.58
1866 2177 5.048434 TGTTACCATTGATCAAAACATCGCA 60.048 36.000 13.09 4.26 0.00 5.10
1867 2178 4.517952 ACCATTGATCAAAACATCGCAA 57.482 36.364 13.09 0.00 0.00 4.85
1868 2179 4.880759 ACCATTGATCAAAACATCGCAAA 58.119 34.783 13.09 0.00 0.00 3.68
1869 2180 4.685628 ACCATTGATCAAAACATCGCAAAC 59.314 37.500 13.09 0.00 0.00 2.93
1870 2181 4.091800 CCATTGATCAAAACATCGCAAACC 59.908 41.667 13.09 0.00 0.00 3.27
1871 2182 3.998099 TGATCAAAACATCGCAAACCA 57.002 38.095 0.00 0.00 0.00 3.67
1872 2183 3.899734 TGATCAAAACATCGCAAACCAG 58.100 40.909 0.00 0.00 0.00 4.00
1873 2184 3.567585 TGATCAAAACATCGCAAACCAGA 59.432 39.130 0.00 0.00 0.00 3.86
1874 2185 4.037327 TGATCAAAACATCGCAAACCAGAA 59.963 37.500 0.00 0.00 0.00 3.02
1875 2186 4.582701 TCAAAACATCGCAAACCAGAAT 57.417 36.364 0.00 0.00 0.00 2.40
1876 2187 4.545610 TCAAAACATCGCAAACCAGAATC 58.454 39.130 0.00 0.00 0.00 2.52
1877 2188 4.278170 TCAAAACATCGCAAACCAGAATCT 59.722 37.500 0.00 0.00 0.00 2.40
1878 2189 4.853924 AAACATCGCAAACCAGAATCTT 57.146 36.364 0.00 0.00 0.00 2.40
1879 2190 4.853924 AACATCGCAAACCAGAATCTTT 57.146 36.364 0.00 0.00 0.00 2.52
1880 2191 4.164822 ACATCGCAAACCAGAATCTTTG 57.835 40.909 0.00 0.00 0.00 2.77
1881 2192 3.057315 ACATCGCAAACCAGAATCTTTGG 60.057 43.478 0.00 0.00 41.60 3.28
1882 2193 2.857483 TCGCAAACCAGAATCTTTGGA 58.143 42.857 0.00 0.00 39.08 3.53
1883 2194 3.420893 TCGCAAACCAGAATCTTTGGAT 58.579 40.909 0.00 0.00 39.08 3.41
1884 2195 3.440173 TCGCAAACCAGAATCTTTGGATC 59.560 43.478 0.00 0.00 39.08 3.36
1885 2196 3.191162 CGCAAACCAGAATCTTTGGATCA 59.809 43.478 0.00 0.00 39.08 2.92
1886 2197 4.673580 CGCAAACCAGAATCTTTGGATCAG 60.674 45.833 0.00 0.00 39.08 2.90
1887 2198 4.460382 GCAAACCAGAATCTTTGGATCAGA 59.540 41.667 0.00 0.00 39.08 3.27
1888 2199 5.126707 GCAAACCAGAATCTTTGGATCAGAT 59.873 40.000 0.00 0.00 39.08 2.90
1889 2200 6.561614 CAAACCAGAATCTTTGGATCAGATG 58.438 40.000 0.00 0.00 39.08 2.90
1890 2201 4.205587 ACCAGAATCTTTGGATCAGATGC 58.794 43.478 0.00 0.00 39.08 3.91
1891 2202 4.204799 CCAGAATCTTTGGATCAGATGCA 58.795 43.478 0.00 0.00 37.96 3.96
1892 2203 4.643334 CCAGAATCTTTGGATCAGATGCAA 59.357 41.667 13.05 13.05 38.89 4.08
1893 2204 5.302059 CCAGAATCTTTGGATCAGATGCAAT 59.698 40.000 17.27 3.35 40.34 3.56
1894 2205 6.489022 CCAGAATCTTTGGATCAGATGCAATA 59.511 38.462 17.27 9.80 40.34 1.90
1895 2206 7.013942 CCAGAATCTTTGGATCAGATGCAATAA 59.986 37.037 17.27 9.49 40.34 1.40
1896 2207 7.861372 CAGAATCTTTGGATCAGATGCAATAAC 59.139 37.037 17.27 8.37 40.34 1.89
1897 2208 7.558807 AGAATCTTTGGATCAGATGCAATAACA 59.441 33.333 17.27 2.77 40.34 2.41
1898 2209 7.649533 ATCTTTGGATCAGATGCAATAACAA 57.350 32.000 17.27 2.42 40.34 2.83
1899 2210 7.465353 TCTTTGGATCAGATGCAATAACAAA 57.535 32.000 17.27 1.74 40.34 2.83
1900 2211 7.894708 TCTTTGGATCAGATGCAATAACAAAA 58.105 30.769 17.27 1.07 40.34 2.44
1901 2212 8.533657 TCTTTGGATCAGATGCAATAACAAAAT 58.466 29.630 17.27 0.00 40.34 1.82
1902 2213 8.481974 TTTGGATCAGATGCAATAACAAAATG 57.518 30.769 17.27 0.00 40.34 2.32
1903 2214 6.044046 TGGATCAGATGCAATAACAAAATGC 58.956 36.000 1.33 0.00 40.45 3.56
1958 2273 7.105588 TCAATCATAGCATTACACAGAACACT 58.894 34.615 0.00 0.00 0.00 3.55
1962 2277 7.836842 TCATAGCATTACACAGAACACTAGAA 58.163 34.615 0.00 0.00 0.00 2.10
1963 2278 8.478066 TCATAGCATTACACAGAACACTAGAAT 58.522 33.333 0.00 0.00 0.00 2.40
2002 2317 2.590007 CCATGGACCAGCTAGCGC 60.590 66.667 5.56 0.00 0.00 5.92
2004 2319 3.083349 ATGGACCAGCTAGCGCCA 61.083 61.111 19.03 19.03 36.60 5.69
2061 2376 4.414956 ATCGCCCCTCCCTCACCA 62.415 66.667 0.00 0.00 0.00 4.17
2086 2401 2.953648 CCGGGAAAACCTTGTTGTAGTT 59.046 45.455 0.00 0.00 36.97 2.24
2091 2406 5.105675 GGGAAAACCTTGTTGTAGTTGACAA 60.106 40.000 0.00 0.00 40.13 3.18
2113 2428 4.168922 TCAGAAAATCGTCGTGCTAAGA 57.831 40.909 0.00 0.00 0.00 2.10
2151 2466 2.036571 CAGAGCAGCAACCATCGCA 61.037 57.895 0.00 0.00 0.00 5.10
2171 2486 4.975502 CGCAGATGAAGAGAGTTGTAGATC 59.024 45.833 0.00 0.00 0.00 2.75
2197 2512 5.670792 AAGATCGAACCTATAACCACACA 57.329 39.130 0.00 0.00 0.00 3.72
2245 2561 5.453903 CCAAATAGATCCATCGAAGACCAGT 60.454 44.000 0.00 0.00 42.51 4.00
2246 2562 4.862902 ATAGATCCATCGAAGACCAGTG 57.137 45.455 0.00 0.00 42.51 3.66
2262 2579 1.153449 GTGCCGATCGAATCCCACA 60.153 57.895 18.66 0.00 31.91 4.17
2268 2585 2.036475 CCGATCGAATCCCACAAGATCT 59.964 50.000 18.66 0.00 36.50 2.75
2300 2617 3.116300 CACCTCCACATATTCTTCGACG 58.884 50.000 0.00 0.00 0.00 5.12
2304 2621 4.499865 CCTCCACATATTCTTCGACGATGT 60.500 45.833 10.18 2.46 0.00 3.06
2349 2666 6.433404 TGGATAGGACGTAGGAGACATTATTC 59.567 42.308 0.00 0.00 0.00 1.75
2366 2683 2.526888 TTCCTACTGAGGGACATCGT 57.473 50.000 0.00 0.00 43.94 3.73
2368 2685 1.283905 TCCTACTGAGGGACATCGTCA 59.716 52.381 0.00 0.00 43.94 4.35
2381 2698 2.377628 ATCGTCACCGCCACACAACT 62.378 55.000 0.00 0.00 0.00 3.16
2393 2710 2.364632 CACACAACTCCAACCAAGACA 58.635 47.619 0.00 0.00 0.00 3.41
2396 2713 3.381272 ACACAACTCCAACCAAGACATTG 59.619 43.478 0.00 0.00 36.09 2.82
2403 2720 5.055265 TCCAACCAAGACATTGAACCTAA 57.945 39.130 0.00 0.00 38.83 2.69
2408 2725 6.391227 ACCAAGACATTGAACCTAACAAAG 57.609 37.500 0.00 0.00 38.83 2.77
2413 2730 7.639113 AGACATTGAACCTAACAAAGACAAA 57.361 32.000 0.00 0.00 0.00 2.83
2417 2734 8.091449 ACATTGAACCTAACAAAGACAAAAACA 58.909 29.630 0.00 0.00 0.00 2.83
2420 2737 6.209788 TGAACCTAACAAAGACAAAAACAGGT 59.790 34.615 0.00 0.00 35.42 4.00
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 4.654915 TCTGCTGTCCAATTTCATGAGAA 58.345 39.130 0.00 0.00 0.00 2.87
11 12 4.290711 TCTGCTGTCCAATTTCATGAGA 57.709 40.909 0.00 0.00 0.00 3.27
12 13 5.821470 ACTATCTGCTGTCCAATTTCATGAG 59.179 40.000 0.00 0.00 0.00 2.90
13 14 5.587443 CACTATCTGCTGTCCAATTTCATGA 59.413 40.000 0.00 0.00 0.00 3.07
14 15 5.356190 ACACTATCTGCTGTCCAATTTCATG 59.644 40.000 0.00 0.00 0.00 3.07
15 16 5.503927 ACACTATCTGCTGTCCAATTTCAT 58.496 37.500 0.00 0.00 0.00 2.57
16 17 4.910195 ACACTATCTGCTGTCCAATTTCA 58.090 39.130 0.00 0.00 0.00 2.69
17 18 6.540189 ACATACACTATCTGCTGTCCAATTTC 59.460 38.462 0.00 0.00 0.00 2.17
18 19 6.418101 ACATACACTATCTGCTGTCCAATTT 58.582 36.000 0.00 0.00 0.00 1.82
19 20 5.994250 ACATACACTATCTGCTGTCCAATT 58.006 37.500 0.00 0.00 0.00 2.32
20 21 5.620738 ACATACACTATCTGCTGTCCAAT 57.379 39.130 0.00 0.00 0.00 3.16
21 22 6.731292 ATACATACACTATCTGCTGTCCAA 57.269 37.500 0.00 0.00 0.00 3.53
22 23 7.039714 CCTTATACATACACTATCTGCTGTCCA 60.040 40.741 0.00 0.00 0.00 4.02
23 24 7.039644 ACCTTATACATACACTATCTGCTGTCC 60.040 40.741 0.00 0.00 0.00 4.02
24 25 7.810282 CACCTTATACATACACTATCTGCTGTC 59.190 40.741 0.00 0.00 0.00 3.51
25 26 7.255977 CCACCTTATACATACACTATCTGCTGT 60.256 40.741 0.00 0.00 0.00 4.40
26 27 7.093354 CCACCTTATACATACACTATCTGCTG 58.907 42.308 0.00 0.00 0.00 4.41
27 28 6.782988 ACCACCTTATACATACACTATCTGCT 59.217 38.462 0.00 0.00 0.00 4.24
28 29 6.994221 ACCACCTTATACATACACTATCTGC 58.006 40.000 0.00 0.00 0.00 4.26
29 30 7.309867 GGGACCACCTTATACATACACTATCTG 60.310 44.444 0.00 0.00 35.85 2.90
30 31 6.724905 GGGACCACCTTATACATACACTATCT 59.275 42.308 0.00 0.00 35.85 1.98
31 32 6.932947 GGGACCACCTTATACATACACTATC 58.067 44.000 0.00 0.00 35.85 2.08
32 33 6.930068 GGGACCACCTTATACATACACTAT 57.070 41.667 0.00 0.00 35.85 2.12
47 48 1.212935 ACAATCAGCATAGGGACCACC 59.787 52.381 0.00 0.00 40.67 4.61
48 49 2.565841 GACAATCAGCATAGGGACCAC 58.434 52.381 0.00 0.00 0.00 4.16
49 50 1.490490 GGACAATCAGCATAGGGACCA 59.510 52.381 0.00 0.00 0.00 4.02
50 51 1.202818 GGGACAATCAGCATAGGGACC 60.203 57.143 0.00 0.00 0.00 4.46
51 52 1.771255 AGGGACAATCAGCATAGGGAC 59.229 52.381 0.00 0.00 0.00 4.46
52 53 2.196742 AGGGACAATCAGCATAGGGA 57.803 50.000 0.00 0.00 0.00 4.20
53 54 3.871463 GCATAGGGACAATCAGCATAGGG 60.871 52.174 0.00 0.00 0.00 3.53
54 55 3.008813 AGCATAGGGACAATCAGCATAGG 59.991 47.826 0.00 0.00 0.00 2.57
55 56 4.001652 CAGCATAGGGACAATCAGCATAG 58.998 47.826 0.00 0.00 0.00 2.23
56 57 3.647590 TCAGCATAGGGACAATCAGCATA 59.352 43.478 0.00 0.00 0.00 3.14
57 58 2.440627 TCAGCATAGGGACAATCAGCAT 59.559 45.455 0.00 0.00 0.00 3.79
58 59 1.839354 TCAGCATAGGGACAATCAGCA 59.161 47.619 0.00 0.00 0.00 4.41
59 60 2.627515 TCAGCATAGGGACAATCAGC 57.372 50.000 0.00 0.00 0.00 4.26
60 61 4.040829 TGGTATCAGCATAGGGACAATCAG 59.959 45.833 0.00 0.00 0.00 2.90
61 62 3.973305 TGGTATCAGCATAGGGACAATCA 59.027 43.478 0.00 0.00 0.00 2.57
62 63 4.623932 TGGTATCAGCATAGGGACAATC 57.376 45.455 0.00 0.00 0.00 2.67
63 64 6.898171 ATATGGTATCAGCATAGGGACAAT 57.102 37.500 4.60 0.00 41.23 2.71
64 65 7.995052 ATATATGGTATCAGCATAGGGACAA 57.005 36.000 4.60 0.00 41.23 3.18
65 66 9.500701 TTTATATATGGTATCAGCATAGGGACA 57.499 33.333 0.00 0.00 41.23 4.02
89 90 8.816894 TGGTACAGAAGAGATAGAGAAACATTT 58.183 33.333 0.00 0.00 0.00 2.32
90 91 8.367660 TGGTACAGAAGAGATAGAGAAACATT 57.632 34.615 0.00 0.00 0.00 2.71
91 92 7.962995 TGGTACAGAAGAGATAGAGAAACAT 57.037 36.000 0.00 0.00 0.00 2.71
92 93 7.776618 TTGGTACAGAAGAGATAGAGAAACA 57.223 36.000 0.00 0.00 42.39 2.83
101 102 8.951243 GCTCTTTTTAATTGGTACAGAAGAGAT 58.049 33.333 12.46 0.00 42.39 2.75
102 103 7.117812 CGCTCTTTTTAATTGGTACAGAAGAGA 59.882 37.037 12.46 0.47 42.39 3.10
103 104 7.095187 ACGCTCTTTTTAATTGGTACAGAAGAG 60.095 37.037 0.00 0.00 42.39 2.85
104 105 6.708949 ACGCTCTTTTTAATTGGTACAGAAGA 59.291 34.615 0.00 0.00 42.39 2.87
105 106 6.899114 ACGCTCTTTTTAATTGGTACAGAAG 58.101 36.000 0.00 0.00 42.39 2.85
106 107 6.870971 ACGCTCTTTTTAATTGGTACAGAA 57.129 33.333 0.00 0.00 42.39 3.02
107 108 7.118680 CCTTACGCTCTTTTTAATTGGTACAGA 59.881 37.037 0.00 0.00 42.39 3.41
108 109 7.094933 ACCTTACGCTCTTTTTAATTGGTACAG 60.095 37.037 0.00 0.00 42.39 2.74
109 110 6.711645 ACCTTACGCTCTTTTTAATTGGTACA 59.288 34.615 0.00 0.00 0.00 2.90
110 111 7.137490 ACCTTACGCTCTTTTTAATTGGTAC 57.863 36.000 0.00 0.00 0.00 3.34
111 112 7.662669 AGAACCTTACGCTCTTTTTAATTGGTA 59.337 33.333 0.00 0.00 0.00 3.25
112 113 6.489022 AGAACCTTACGCTCTTTTTAATTGGT 59.511 34.615 0.00 0.00 0.00 3.67
113 114 6.909909 AGAACCTTACGCTCTTTTTAATTGG 58.090 36.000 0.00 0.00 0.00 3.16
114 115 7.860872 ACAAGAACCTTACGCTCTTTTTAATTG 59.139 33.333 0.00 0.00 0.00 2.32
115 116 7.937649 ACAAGAACCTTACGCTCTTTTTAATT 58.062 30.769 0.00 0.00 0.00 1.40
116 117 7.506328 ACAAGAACCTTACGCTCTTTTTAAT 57.494 32.000 0.00 0.00 0.00 1.40
117 118 6.930667 ACAAGAACCTTACGCTCTTTTTAA 57.069 33.333 0.00 0.00 0.00 1.52
118 119 6.017687 GGAACAAGAACCTTACGCTCTTTTTA 60.018 38.462 0.00 0.00 0.00 1.52
119 120 5.220989 GGAACAAGAACCTTACGCTCTTTTT 60.221 40.000 0.00 0.00 0.00 1.94
120 121 4.275196 GGAACAAGAACCTTACGCTCTTTT 59.725 41.667 0.00 0.00 0.00 2.27
121 122 3.813724 GGAACAAGAACCTTACGCTCTTT 59.186 43.478 0.00 0.00 0.00 2.52
122 123 3.181458 TGGAACAAGAACCTTACGCTCTT 60.181 43.478 0.00 0.00 31.92 2.85
123 124 2.367567 TGGAACAAGAACCTTACGCTCT 59.632 45.455 0.00 0.00 31.92 4.09
124 125 2.762745 TGGAACAAGAACCTTACGCTC 58.237 47.619 0.00 0.00 31.92 5.03
125 126 2.922740 TGGAACAAGAACCTTACGCT 57.077 45.000 0.00 0.00 31.92 5.07
139 140 3.699538 GGTGGTGGGAATAAAGATGGAAC 59.300 47.826 0.00 0.00 0.00 3.62
140 141 3.309556 GGGTGGTGGGAATAAAGATGGAA 60.310 47.826 0.00 0.00 0.00 3.53
141 142 2.243736 GGGTGGTGGGAATAAAGATGGA 59.756 50.000 0.00 0.00 0.00 3.41
142 143 2.244769 AGGGTGGTGGGAATAAAGATGG 59.755 50.000 0.00 0.00 0.00 3.51
143 144 3.669939 AGGGTGGTGGGAATAAAGATG 57.330 47.619 0.00 0.00 0.00 2.90
144 145 4.692523 AAAGGGTGGTGGGAATAAAGAT 57.307 40.909 0.00 0.00 0.00 2.40
145 146 4.156477 CAAAAGGGTGGTGGGAATAAAGA 58.844 43.478 0.00 0.00 0.00 2.52
146 147 3.901222 ACAAAAGGGTGGTGGGAATAAAG 59.099 43.478 0.00 0.00 0.00 1.85
147 148 3.898741 GACAAAAGGGTGGTGGGAATAAA 59.101 43.478 0.00 0.00 0.00 1.40
148 149 3.502356 GACAAAAGGGTGGTGGGAATAA 58.498 45.455 0.00 0.00 0.00 1.40
149 150 2.225167 GGACAAAAGGGTGGTGGGAATA 60.225 50.000 0.00 0.00 0.00 1.75
150 151 1.482365 GGACAAAAGGGTGGTGGGAAT 60.482 52.381 0.00 0.00 0.00 3.01
151 152 0.105913 GGACAAAAGGGTGGTGGGAA 60.106 55.000 0.00 0.00 0.00 3.97
152 153 1.289982 TGGACAAAAGGGTGGTGGGA 61.290 55.000 0.00 0.00 0.00 4.37
153 154 0.397816 TTGGACAAAAGGGTGGTGGG 60.398 55.000 0.00 0.00 0.00 4.61
154 155 0.750249 GTTGGACAAAAGGGTGGTGG 59.250 55.000 0.00 0.00 0.00 4.61
155 156 0.750249 GGTTGGACAAAAGGGTGGTG 59.250 55.000 0.00 0.00 0.00 4.17
156 157 0.634465 AGGTTGGACAAAAGGGTGGT 59.366 50.000 0.00 0.00 0.00 4.16
157 158 1.788229 AAGGTTGGACAAAAGGGTGG 58.212 50.000 0.00 0.00 0.00 4.61
158 159 3.904800 AAAAGGTTGGACAAAAGGGTG 57.095 42.857 0.00 0.00 0.00 4.61
159 160 8.959676 TTATATAAAAGGTTGGACAAAAGGGT 57.040 30.769 0.00 0.00 0.00 4.34
243 244 9.308000 TGTCCTTGATTTACCTTATGTTTTGAT 57.692 29.630 0.00 0.00 0.00 2.57
274 278 8.784994 ACGGTTGTGTACATAAATGTTTATCAA 58.215 29.630 6.62 0.00 41.97 2.57
278 282 9.433153 TCATACGGTTGTGTACATAAATGTTTA 57.567 29.630 6.62 0.00 41.97 2.01
289 293 7.544566 CCTATCCATATTCATACGGTTGTGTAC 59.455 40.741 0.00 0.00 0.00 2.90
351 355 4.980903 GCTTGTGCGGTGCAACGG 62.981 66.667 27.78 9.86 41.47 4.44
353 357 0.039617 TAATGCTTGTGCGGTGCAAC 60.040 50.000 0.00 0.00 41.47 4.17
481 492 1.004560 CATCTATCCGGCGCACCAT 60.005 57.895 10.83 0.00 34.57 3.55
488 499 2.262915 CCTCGGCATCTATCCGGC 59.737 66.667 0.00 0.00 46.43 6.13
502 513 0.853530 AAATACATCCCCTGGCCCTC 59.146 55.000 0.00 0.00 0.00 4.30
505 516 2.649816 AGGATAAATACATCCCCTGGCC 59.350 50.000 0.00 0.00 44.93 5.36
506 517 3.690460 CAGGATAAATACATCCCCTGGC 58.310 50.000 0.00 0.00 44.93 4.85
508 519 5.072741 CAACCAGGATAAATACATCCCCTG 58.927 45.833 0.00 0.00 44.93 4.45
509 520 4.447762 GCAACCAGGATAAATACATCCCCT 60.448 45.833 0.00 0.00 44.93 4.79
510 521 3.826729 GCAACCAGGATAAATACATCCCC 59.173 47.826 0.00 0.00 44.93 4.81
526 551 0.891449 CCGGGTACACATTGCAACCA 60.891 55.000 0.00 0.00 30.65 3.67
799 909 4.699522 GAGGAGGCGGTTGCGGTT 62.700 66.667 0.00 0.00 44.10 4.44
826 947 1.292223 CCGCGTGGGGATATGTAGG 59.708 63.158 7.26 0.00 0.00 3.18
830 951 2.666190 CTGCCGCGTGGGGATATG 60.666 66.667 18.41 0.00 34.56 1.78
849 977 2.484264 CTGGAAACTTGGAATGGACGAC 59.516 50.000 0.00 0.00 0.00 4.34
919 1067 1.291588 CAACTCTGCGAGCTCTGGT 59.708 57.895 12.85 0.40 32.04 4.00
1422 1708 2.095843 GCATCGCGTCCGTTTCAC 59.904 61.111 5.77 0.00 35.54 3.18
1527 1826 3.555168 CCCTGGATTTCTACTACATCGCC 60.555 52.174 0.00 0.00 0.00 5.54
1529 1828 3.322254 AGCCCTGGATTTCTACTACATCG 59.678 47.826 0.00 0.00 0.00 3.84
1539 1838 2.038387 TCGCTAAAGCCCTGGATTTC 57.962 50.000 2.14 0.00 35.28 2.17
1544 1855 2.325583 TACAATCGCTAAAGCCCTGG 57.674 50.000 0.00 0.00 37.91 4.45
1581 1892 2.512692 TCACAATGGAGTGGAATGGG 57.487 50.000 0.00 0.00 39.93 4.00
1590 1901 5.502382 CGACGGTTTCATATTCACAATGGAG 60.502 44.000 0.00 0.00 0.00 3.86
1605 1916 6.667007 TTAATTAATTCCTCCGACGGTTTC 57.333 37.500 14.79 0.00 0.00 2.78
1608 1919 6.482308 CAGATTTAATTAATTCCTCCGACGGT 59.518 38.462 14.79 0.00 0.00 4.83
1623 1934 9.699410 TCCCTGTGACATAATTCAGATTTAATT 57.301 29.630 0.00 0.00 0.00 1.40
1647 1958 2.152016 CTGAAAACGAAAGGGGAGTCC 58.848 52.381 0.00 0.00 0.00 3.85
1648 1959 2.548480 CACTGAAAACGAAAGGGGAGTC 59.452 50.000 0.00 0.00 0.00 3.36
1649 1960 2.171870 TCACTGAAAACGAAAGGGGAGT 59.828 45.455 0.00 0.00 0.00 3.85
1650 1961 2.846193 TCACTGAAAACGAAAGGGGAG 58.154 47.619 0.00 0.00 0.00 4.30
1651 1962 3.502123 ATCACTGAAAACGAAAGGGGA 57.498 42.857 0.00 0.00 0.00 4.81
1652 1963 4.154195 CACTATCACTGAAAACGAAAGGGG 59.846 45.833 0.00 0.00 0.00 4.79
1653 1964 4.154195 CCACTATCACTGAAAACGAAAGGG 59.846 45.833 0.00 0.00 0.00 3.95
1654 1965 4.378459 GCCACTATCACTGAAAACGAAAGG 60.378 45.833 0.00 0.00 0.00 3.11
1655 1966 4.213270 TGCCACTATCACTGAAAACGAAAG 59.787 41.667 0.00 0.00 0.00 2.62
1656 1967 4.024387 GTGCCACTATCACTGAAAACGAAA 60.024 41.667 0.00 0.00 0.00 3.46
1657 1968 3.496884 GTGCCACTATCACTGAAAACGAA 59.503 43.478 0.00 0.00 0.00 3.85
1658 1969 3.064207 GTGCCACTATCACTGAAAACGA 58.936 45.455 0.00 0.00 0.00 3.85
1659 1970 2.159627 GGTGCCACTATCACTGAAAACG 59.840 50.000 0.00 0.00 34.97 3.60
1660 1971 2.159627 CGGTGCCACTATCACTGAAAAC 59.840 50.000 0.00 0.00 41.98 2.43
1661 1972 2.037902 TCGGTGCCACTATCACTGAAAA 59.962 45.455 0.00 0.00 44.25 2.29
1662 1973 1.621317 TCGGTGCCACTATCACTGAAA 59.379 47.619 0.00 0.00 44.25 2.69
1663 1974 1.204704 CTCGGTGCCACTATCACTGAA 59.795 52.381 6.19 0.00 45.82 3.02
1664 1975 0.817654 CTCGGTGCCACTATCACTGA 59.182 55.000 0.00 4.80 44.80 3.41
1665 1976 0.179100 CCTCGGTGCCACTATCACTG 60.179 60.000 0.00 0.00 41.06 3.66
1666 1977 1.961180 GCCTCGGTGCCACTATCACT 61.961 60.000 0.00 0.00 34.97 3.41
1667 1978 1.521681 GCCTCGGTGCCACTATCAC 60.522 63.158 0.00 0.00 0.00 3.06
1668 1979 1.987306 TGCCTCGGTGCCACTATCA 60.987 57.895 0.00 0.00 0.00 2.15
1669 1980 1.521681 GTGCCTCGGTGCCACTATC 60.522 63.158 0.00 0.00 0.00 2.08
1670 1981 1.990060 AGTGCCTCGGTGCCACTAT 60.990 57.895 0.00 0.00 0.00 2.12
1671 1982 2.603473 AGTGCCTCGGTGCCACTA 60.603 61.111 0.00 0.00 0.00 2.74
1672 1983 4.320456 CAGTGCCTCGGTGCCACT 62.320 66.667 0.00 0.00 0.00 4.00
1673 1984 4.314440 TCAGTGCCTCGGTGCCAC 62.314 66.667 0.00 0.00 0.00 5.01
1674 1985 4.314440 GTCAGTGCCTCGGTGCCA 62.314 66.667 0.00 0.00 0.00 4.92
1676 1987 4.314440 TGGTCAGTGCCTCGGTGC 62.314 66.667 5.39 0.00 0.00 5.01
1677 1988 2.357517 GTGGTCAGTGCCTCGGTG 60.358 66.667 5.39 0.00 0.00 4.94
1678 1989 2.524394 AGTGGTCAGTGCCTCGGT 60.524 61.111 5.39 0.00 0.00 4.69
1679 1990 2.047844 CAGTGGTCAGTGCCTCGG 60.048 66.667 5.39 0.00 0.00 4.63
1680 1991 1.892819 ATCCAGTGGTCAGTGCCTCG 61.893 60.000 9.54 0.00 0.00 4.63
1681 1992 0.392193 CATCCAGTGGTCAGTGCCTC 60.392 60.000 9.54 2.31 0.00 4.70
1682 1993 1.130054 ACATCCAGTGGTCAGTGCCT 61.130 55.000 9.54 0.00 0.00 4.75
1683 1994 0.613260 TACATCCAGTGGTCAGTGCC 59.387 55.000 9.54 0.00 0.00 5.01
1684 1995 2.283298 CATACATCCAGTGGTCAGTGC 58.717 52.381 9.54 0.00 0.00 4.40
1685 1996 3.196469 AGACATACATCCAGTGGTCAGTG 59.804 47.826 9.54 7.02 37.94 3.66
1686 1997 3.445008 AGACATACATCCAGTGGTCAGT 58.555 45.455 9.54 8.90 37.94 3.41
1687 1998 5.798125 ATAGACATACATCCAGTGGTCAG 57.202 43.478 9.54 2.90 37.94 3.51
1688 1999 5.221244 CGAATAGACATACATCCAGTGGTCA 60.221 44.000 9.54 0.00 37.94 4.02
1689 2000 5.009710 TCGAATAGACATACATCCAGTGGTC 59.990 44.000 9.54 0.00 36.61 4.02
1690 2001 4.893524 TCGAATAGACATACATCCAGTGGT 59.106 41.667 9.54 0.00 0.00 4.16
1691 2002 5.453567 TCGAATAGACATACATCCAGTGG 57.546 43.478 1.40 1.40 0.00 4.00
1692 2003 4.920340 GCTCGAATAGACATACATCCAGTG 59.080 45.833 0.00 0.00 0.00 3.66
1693 2004 4.584743 TGCTCGAATAGACATACATCCAGT 59.415 41.667 0.00 0.00 0.00 4.00
1694 2005 5.126396 TGCTCGAATAGACATACATCCAG 57.874 43.478 0.00 0.00 0.00 3.86
1695 2006 4.584743 ACTGCTCGAATAGACATACATCCA 59.415 41.667 2.88 0.00 0.00 3.41
1696 2007 4.920340 CACTGCTCGAATAGACATACATCC 59.080 45.833 2.88 0.00 0.00 3.51
1697 2008 4.384247 GCACTGCTCGAATAGACATACATC 59.616 45.833 2.88 0.00 0.00 3.06
1698 2009 4.038522 AGCACTGCTCGAATAGACATACAT 59.961 41.667 0.00 0.00 30.62 2.29
1699 2010 3.381590 AGCACTGCTCGAATAGACATACA 59.618 43.478 0.00 0.00 30.62 2.29
1700 2011 3.971150 AGCACTGCTCGAATAGACATAC 58.029 45.455 0.00 0.00 30.62 2.39
1701 2012 5.767816 TTAGCACTGCTCGAATAGACATA 57.232 39.130 6.86 0.00 40.44 2.29
1702 2013 4.655762 TTAGCACTGCTCGAATAGACAT 57.344 40.909 6.86 0.00 40.44 3.06
1703 2014 4.450082 TTTAGCACTGCTCGAATAGACA 57.550 40.909 6.86 0.00 40.44 3.41
1704 2015 4.210120 CCATTTAGCACTGCTCGAATAGAC 59.790 45.833 6.86 0.00 40.44 2.59
1705 2016 4.099419 TCCATTTAGCACTGCTCGAATAGA 59.901 41.667 6.86 5.60 40.44 1.98
1706 2017 4.210120 GTCCATTTAGCACTGCTCGAATAG 59.790 45.833 6.86 3.38 40.44 1.73
1707 2018 4.119862 GTCCATTTAGCACTGCTCGAATA 58.880 43.478 6.86 0.00 40.44 1.75
1708 2019 2.939103 GTCCATTTAGCACTGCTCGAAT 59.061 45.455 6.86 6.76 40.44 3.34
1709 2020 2.346803 GTCCATTTAGCACTGCTCGAA 58.653 47.619 6.86 4.56 40.44 3.71
1710 2021 1.735700 CGTCCATTTAGCACTGCTCGA 60.736 52.381 6.86 0.00 40.44 4.04
1711 2022 0.647410 CGTCCATTTAGCACTGCTCG 59.353 55.000 6.86 0.00 40.44 5.03
1712 2023 2.010145 TCGTCCATTTAGCACTGCTC 57.990 50.000 6.86 0.00 40.44 4.26
1713 2024 2.698855 ATCGTCCATTTAGCACTGCT 57.301 45.000 8.95 8.95 43.41 4.24
1714 2025 3.458189 ACTATCGTCCATTTAGCACTGC 58.542 45.455 0.00 0.00 0.00 4.40
1715 2026 5.109210 TGAACTATCGTCCATTTAGCACTG 58.891 41.667 0.00 0.00 0.00 3.66
1716 2027 5.339008 TGAACTATCGTCCATTTAGCACT 57.661 39.130 0.00 0.00 0.00 4.40
1717 2028 5.559035 GCATGAACTATCGTCCATTTAGCAC 60.559 44.000 0.00 0.00 0.00 4.40
1718 2029 4.511454 GCATGAACTATCGTCCATTTAGCA 59.489 41.667 0.00 0.00 0.00 3.49
1719 2030 4.083802 GGCATGAACTATCGTCCATTTAGC 60.084 45.833 0.00 0.00 0.00 3.09
1720 2031 4.452455 GGGCATGAACTATCGTCCATTTAG 59.548 45.833 0.00 0.00 0.00 1.85
1721 2032 4.385825 GGGCATGAACTATCGTCCATTTA 58.614 43.478 0.00 0.00 0.00 1.40
1722 2033 3.214328 GGGCATGAACTATCGTCCATTT 58.786 45.455 0.00 0.00 0.00 2.32
1723 2034 2.806745 CGGGCATGAACTATCGTCCATT 60.807 50.000 0.00 0.00 0.00 3.16
1724 2035 1.270305 CGGGCATGAACTATCGTCCAT 60.270 52.381 0.00 0.00 0.00 3.41
1725 2036 0.104120 CGGGCATGAACTATCGTCCA 59.896 55.000 0.00 0.00 0.00 4.02
1726 2037 0.387929 TCGGGCATGAACTATCGTCC 59.612 55.000 0.00 0.00 0.00 4.79
1727 2038 2.440539 ATCGGGCATGAACTATCGTC 57.559 50.000 0.00 0.00 0.00 4.20
1728 2039 3.258372 ACATATCGGGCATGAACTATCGT 59.742 43.478 0.00 0.00 0.00 3.73
1729 2040 3.614176 CACATATCGGGCATGAACTATCG 59.386 47.826 0.00 0.00 0.00 2.92
1730 2041 4.389992 CACACATATCGGGCATGAACTATC 59.610 45.833 0.00 0.00 0.00 2.08
1731 2042 4.318332 CACACATATCGGGCATGAACTAT 58.682 43.478 0.00 0.00 0.00 2.12
1732 2043 3.494223 CCACACATATCGGGCATGAACTA 60.494 47.826 0.00 0.00 0.00 2.24
1733 2044 2.564771 CACACATATCGGGCATGAACT 58.435 47.619 0.00 0.00 0.00 3.01
1734 2045 1.603802 CCACACATATCGGGCATGAAC 59.396 52.381 0.00 0.00 0.00 3.18
1735 2046 1.488393 TCCACACATATCGGGCATGAA 59.512 47.619 0.00 0.00 0.00 2.57
1736 2047 1.127343 TCCACACATATCGGGCATGA 58.873 50.000 0.00 0.00 0.00 3.07
1737 2048 1.229428 GTCCACACATATCGGGCATG 58.771 55.000 0.00 0.00 0.00 4.06
1738 2049 0.249868 CGTCCACACATATCGGGCAT 60.250 55.000 0.00 0.00 0.00 4.40
1739 2050 1.142965 CGTCCACACATATCGGGCA 59.857 57.895 0.00 0.00 0.00 5.36
1740 2051 1.594293 CCGTCCACACATATCGGGC 60.594 63.158 0.00 0.00 37.92 6.13
1741 2052 0.529773 CACCGTCCACACATATCGGG 60.530 60.000 6.84 0.00 44.54 5.14
1742 2053 0.529773 CCACCGTCCACACATATCGG 60.530 60.000 0.00 0.00 45.53 4.18
1743 2054 0.174845 ACCACCGTCCACACATATCG 59.825 55.000 0.00 0.00 0.00 2.92
1744 2055 2.006888 CAACCACCGTCCACACATATC 58.993 52.381 0.00 0.00 0.00 1.63
1745 2056 1.349688 ACAACCACCGTCCACACATAT 59.650 47.619 0.00 0.00 0.00 1.78
1746 2057 0.759959 ACAACCACCGTCCACACATA 59.240 50.000 0.00 0.00 0.00 2.29
1747 2058 0.817634 CACAACCACCGTCCACACAT 60.818 55.000 0.00 0.00 0.00 3.21
1748 2059 1.450491 CACAACCACCGTCCACACA 60.450 57.895 0.00 0.00 0.00 3.72
1749 2060 0.534203 ATCACAACCACCGTCCACAC 60.534 55.000 0.00 0.00 0.00 3.82
1750 2061 0.250124 GATCACAACCACCGTCCACA 60.250 55.000 0.00 0.00 0.00 4.17
1751 2062 0.034896 AGATCACAACCACCGTCCAC 59.965 55.000 0.00 0.00 0.00 4.02
1752 2063 0.034756 CAGATCACAACCACCGTCCA 59.965 55.000 0.00 0.00 0.00 4.02
1753 2064 0.320374 TCAGATCACAACCACCGTCC 59.680 55.000 0.00 0.00 0.00 4.79
1754 2065 1.429463 GTCAGATCACAACCACCGTC 58.571 55.000 0.00 0.00 0.00 4.79
1755 2066 0.034896 GGTCAGATCACAACCACCGT 59.965 55.000 0.00 0.00 33.11 4.83
1756 2067 0.673644 GGGTCAGATCACAACCACCG 60.674 60.000 11.78 0.00 34.62 4.94
1757 2068 0.693049 AGGGTCAGATCACAACCACC 59.307 55.000 11.78 1.27 34.62 4.61
1758 2069 2.301870 TGTAGGGTCAGATCACAACCAC 59.698 50.000 11.78 4.81 34.62 4.16
1759 2070 2.615391 TGTAGGGTCAGATCACAACCA 58.385 47.619 11.78 0.00 34.62 3.67
1760 2071 3.197766 TGATGTAGGGTCAGATCACAACC 59.802 47.826 0.00 0.00 0.00 3.77
1761 2072 4.471904 TGATGTAGGGTCAGATCACAAC 57.528 45.455 0.00 0.00 0.00 3.32
1762 2073 5.698741 AATGATGTAGGGTCAGATCACAA 57.301 39.130 0.00 0.00 31.70 3.33
1763 2074 5.430886 CAAATGATGTAGGGTCAGATCACA 58.569 41.667 0.00 0.00 31.70 3.58
1764 2075 4.818546 CCAAATGATGTAGGGTCAGATCAC 59.181 45.833 0.00 0.00 31.70 3.06
1765 2076 4.141413 CCCAAATGATGTAGGGTCAGATCA 60.141 45.833 0.00 0.00 36.52 2.92
1766 2077 4.392940 CCCAAATGATGTAGGGTCAGATC 58.607 47.826 0.00 0.00 36.52 2.75
1767 2078 3.435601 GCCCAAATGATGTAGGGTCAGAT 60.436 47.826 0.00 0.00 43.42 2.90
1768 2079 2.092429 GCCCAAATGATGTAGGGTCAGA 60.092 50.000 0.00 0.00 43.42 3.27
1769 2080 2.301346 GCCCAAATGATGTAGGGTCAG 58.699 52.381 0.00 0.00 43.42 3.51
1770 2081 1.638070 TGCCCAAATGATGTAGGGTCA 59.362 47.619 0.00 0.00 43.42 4.02
1771 2082 2.024414 GTGCCCAAATGATGTAGGGTC 58.976 52.381 0.00 0.00 43.42 4.46
1772 2083 1.341976 GGTGCCCAAATGATGTAGGGT 60.342 52.381 0.00 0.00 43.42 4.34
1773 2084 1.341877 TGGTGCCCAAATGATGTAGGG 60.342 52.381 0.00 0.00 44.37 3.53
1774 2085 2.142356 TGGTGCCCAAATGATGTAGG 57.858 50.000 0.00 0.00 0.00 3.18
1775 2086 3.181473 CCAATGGTGCCCAAATGATGTAG 60.181 47.826 0.00 0.00 36.95 2.74
1776 2087 2.765135 CCAATGGTGCCCAAATGATGTA 59.235 45.455 0.00 0.00 36.95 2.29
1777 2088 1.555992 CCAATGGTGCCCAAATGATGT 59.444 47.619 0.00 0.00 36.95 3.06
1778 2089 1.555992 ACCAATGGTGCCCAAATGATG 59.444 47.619 3.09 2.04 36.95 3.07
1779 2090 1.955451 ACCAATGGTGCCCAAATGAT 58.045 45.000 3.09 0.00 36.95 2.45
1780 2091 3.472237 ACCAATGGTGCCCAAATGA 57.528 47.368 3.09 0.00 36.95 2.57
1790 2101 3.826729 GGCTCTTTACTTTCACCAATGGT 59.173 43.478 0.00 0.00 35.62 3.55
1791 2102 3.193479 GGGCTCTTTACTTTCACCAATGG 59.807 47.826 0.00 0.00 0.00 3.16
1792 2103 3.826157 TGGGCTCTTTACTTTCACCAATG 59.174 43.478 0.00 0.00 0.00 2.82
1793 2104 4.112634 TGGGCTCTTTACTTTCACCAAT 57.887 40.909 0.00 0.00 0.00 3.16
1794 2105 3.586470 TGGGCTCTTTACTTTCACCAA 57.414 42.857 0.00 0.00 0.00 3.67
1795 2106 3.806949 ATGGGCTCTTTACTTTCACCA 57.193 42.857 0.00 0.00 0.00 4.17
1796 2107 5.468540 AAAATGGGCTCTTTACTTTCACC 57.531 39.130 0.00 0.00 0.00 4.02
1797 2108 7.658261 ACTTAAAATGGGCTCTTTACTTTCAC 58.342 34.615 0.00 0.00 0.00 3.18
1798 2109 7.833285 ACTTAAAATGGGCTCTTTACTTTCA 57.167 32.000 0.00 0.00 0.00 2.69
1799 2110 7.116376 GCAACTTAAAATGGGCTCTTTACTTTC 59.884 37.037 0.00 0.00 0.00 2.62
1800 2111 6.929049 GCAACTTAAAATGGGCTCTTTACTTT 59.071 34.615 0.00 0.00 0.00 2.66
1801 2112 6.455647 GCAACTTAAAATGGGCTCTTTACTT 58.544 36.000 0.00 0.00 0.00 2.24
1802 2113 5.335661 CGCAACTTAAAATGGGCTCTTTACT 60.336 40.000 0.00 0.00 0.00 2.24
1803 2114 4.857037 CGCAACTTAAAATGGGCTCTTTAC 59.143 41.667 0.00 0.00 0.00 2.01
1804 2115 5.054390 CGCAACTTAAAATGGGCTCTTTA 57.946 39.130 0.00 0.00 0.00 1.85
1805 2116 3.913089 CGCAACTTAAAATGGGCTCTTT 58.087 40.909 0.00 0.00 0.00 2.52
1806 2117 3.575965 CGCAACTTAAAATGGGCTCTT 57.424 42.857 0.00 0.00 0.00 2.85
1811 2122 3.181397 CTCATGCGCAACTTAAAATGGG 58.819 45.455 17.11 0.26 0.00 4.00
1812 2123 2.599973 GCTCATGCGCAACTTAAAATGG 59.400 45.455 17.11 0.89 0.00 3.16
1813 2124 2.599973 GGCTCATGCGCAACTTAAAATG 59.400 45.455 17.11 5.44 40.82 2.32
1814 2125 2.230992 TGGCTCATGCGCAACTTAAAAT 59.769 40.909 17.11 0.00 40.82 1.82
1815 2126 1.611006 TGGCTCATGCGCAACTTAAAA 59.389 42.857 17.11 0.00 40.82 1.52
1816 2127 1.199789 CTGGCTCATGCGCAACTTAAA 59.800 47.619 17.11 0.00 40.82 1.52
1817 2128 0.804364 CTGGCTCATGCGCAACTTAA 59.196 50.000 17.11 0.00 40.82 1.85
1818 2129 1.026182 CCTGGCTCATGCGCAACTTA 61.026 55.000 17.11 0.00 40.82 2.24
1819 2130 2.338015 CCTGGCTCATGCGCAACTT 61.338 57.895 17.11 0.00 40.82 2.66
1820 2131 2.749044 CCTGGCTCATGCGCAACT 60.749 61.111 17.11 0.00 40.82 3.16
1821 2132 2.629656 AACCTGGCTCATGCGCAAC 61.630 57.895 17.11 4.09 40.82 4.17
1822 2133 2.282391 AACCTGGCTCATGCGCAA 60.282 55.556 17.11 0.00 40.82 4.85
1823 2134 3.057548 CAACCTGGCTCATGCGCA 61.058 61.111 14.96 14.96 40.82 6.09
1824 2135 3.818787 CCAACCTGGCTCATGCGC 61.819 66.667 0.00 0.00 40.82 6.09
1825 2136 2.360350 ACCAACCTGGCTCATGCG 60.360 61.111 0.00 0.00 42.67 4.73
1826 2137 1.181098 AACACCAACCTGGCTCATGC 61.181 55.000 0.00 0.00 42.67 4.06
1827 2138 1.812571 GTAACACCAACCTGGCTCATG 59.187 52.381 0.00 0.00 42.67 3.07
1828 2139 1.271926 GGTAACACCAACCTGGCTCAT 60.272 52.381 0.00 0.00 42.67 2.90
1829 2140 0.109723 GGTAACACCAACCTGGCTCA 59.890 55.000 0.00 0.00 42.67 4.26
1830 2141 2.942641 GGTAACACCAACCTGGCTC 58.057 57.895 0.00 0.00 42.67 4.70
1843 2154 5.398169 TGCGATGTTTTGATCAATGGTAAC 58.602 37.500 9.40 10.98 0.00 2.50
1844 2155 5.635417 TGCGATGTTTTGATCAATGGTAA 57.365 34.783 9.40 0.00 0.00 2.85
1845 2156 5.635417 TTGCGATGTTTTGATCAATGGTA 57.365 34.783 9.40 0.00 0.00 3.25
1846 2157 4.517952 TTGCGATGTTTTGATCAATGGT 57.482 36.364 9.40 0.00 0.00 3.55
1847 2158 4.091800 GGTTTGCGATGTTTTGATCAATGG 59.908 41.667 9.40 0.00 0.00 3.16
1848 2159 4.685165 TGGTTTGCGATGTTTTGATCAATG 59.315 37.500 9.40 0.00 0.00 2.82
1849 2160 4.880759 TGGTTTGCGATGTTTTGATCAAT 58.119 34.783 9.40 0.00 0.00 2.57
1850 2161 4.037327 TCTGGTTTGCGATGTTTTGATCAA 59.963 37.500 3.38 3.38 0.00 2.57
1851 2162 3.567585 TCTGGTTTGCGATGTTTTGATCA 59.432 39.130 0.00 0.00 0.00 2.92
1852 2163 4.159377 TCTGGTTTGCGATGTTTTGATC 57.841 40.909 0.00 0.00 0.00 2.92
1853 2164 4.582701 TTCTGGTTTGCGATGTTTTGAT 57.417 36.364 0.00 0.00 0.00 2.57
1854 2165 4.278170 AGATTCTGGTTTGCGATGTTTTGA 59.722 37.500 0.00 0.00 0.00 2.69
1855 2166 4.549458 AGATTCTGGTTTGCGATGTTTTG 58.451 39.130 0.00 0.00 0.00 2.44
1856 2167 4.853924 AGATTCTGGTTTGCGATGTTTT 57.146 36.364 0.00 0.00 0.00 2.43
1857 2168 4.853924 AAGATTCTGGTTTGCGATGTTT 57.146 36.364 0.00 0.00 0.00 2.83
1858 2169 4.549458 CAAAGATTCTGGTTTGCGATGTT 58.451 39.130 0.00 0.00 0.00 2.71
1859 2170 3.057315 CCAAAGATTCTGGTTTGCGATGT 60.057 43.478 0.00 0.00 33.15 3.06
1860 2171 3.191162 TCCAAAGATTCTGGTTTGCGATG 59.809 43.478 0.00 0.00 35.30 3.84
1861 2172 3.420893 TCCAAAGATTCTGGTTTGCGAT 58.579 40.909 0.00 0.00 35.30 4.58
1862 2173 2.857483 TCCAAAGATTCTGGTTTGCGA 58.143 42.857 0.00 0.00 35.30 5.10
1863 2174 3.191162 TGATCCAAAGATTCTGGTTTGCG 59.809 43.478 0.00 0.00 35.30 4.85
1864 2175 4.460382 TCTGATCCAAAGATTCTGGTTTGC 59.540 41.667 0.00 0.00 35.30 3.68
1865 2176 6.561614 CATCTGATCCAAAGATTCTGGTTTG 58.438 40.000 0.00 0.00 35.30 2.93
1866 2177 5.126707 GCATCTGATCCAAAGATTCTGGTTT 59.873 40.000 0.00 0.00 35.30 3.27
1867 2178 4.643784 GCATCTGATCCAAAGATTCTGGTT 59.356 41.667 0.00 0.00 35.30 3.67
1868 2179 4.205587 GCATCTGATCCAAAGATTCTGGT 58.794 43.478 0.00 0.00 35.30 4.00
1869 2180 4.204799 TGCATCTGATCCAAAGATTCTGG 58.795 43.478 0.00 0.00 31.92 3.86
1870 2181 5.830000 TTGCATCTGATCCAAAGATTCTG 57.170 39.130 0.00 0.00 31.92 3.02
1871 2182 7.558807 TGTTATTGCATCTGATCCAAAGATTCT 59.441 33.333 0.00 0.00 31.92 2.40
1872 2183 7.709947 TGTTATTGCATCTGATCCAAAGATTC 58.290 34.615 0.00 0.00 31.92 2.52
1873 2184 7.649533 TGTTATTGCATCTGATCCAAAGATT 57.350 32.000 0.00 0.00 31.92 2.40
1874 2185 7.649533 TTGTTATTGCATCTGATCCAAAGAT 57.350 32.000 0.00 0.00 34.66 2.40
1875 2186 7.465353 TTTGTTATTGCATCTGATCCAAAGA 57.535 32.000 0.00 0.00 0.00 2.52
1876 2187 8.600625 CATTTTGTTATTGCATCTGATCCAAAG 58.399 33.333 0.00 0.00 0.00 2.77
1877 2188 7.064847 GCATTTTGTTATTGCATCTGATCCAAA 59.935 33.333 0.00 0.00 36.40 3.28
1878 2189 6.535865 GCATTTTGTTATTGCATCTGATCCAA 59.464 34.615 0.00 0.00 36.40 3.53
1879 2190 6.044046 GCATTTTGTTATTGCATCTGATCCA 58.956 36.000 0.00 0.00 36.40 3.41
1880 2191 6.278363 AGCATTTTGTTATTGCATCTGATCC 58.722 36.000 0.00 0.00 38.84 3.36
1881 2192 7.766219 AAGCATTTTGTTATTGCATCTGATC 57.234 32.000 0.00 0.00 38.84 2.92
1941 2256 9.672673 ATTAATTCTAGTGTTCTGTGTAATGCT 57.327 29.630 0.00 0.00 0.00 3.79
1986 2301 2.590007 GGCGCTAGCTGGTCCATG 60.590 66.667 13.93 0.00 44.37 3.66
1995 2310 1.019278 TGCTTGTAGTTGGCGCTAGC 61.019 55.000 7.64 4.06 44.18 3.42
2002 2317 1.160137 GCTCCAGTGCTTGTAGTTGG 58.840 55.000 0.00 0.00 0.00 3.77
2004 2319 0.679505 TCGCTCCAGTGCTTGTAGTT 59.320 50.000 0.00 0.00 0.00 2.24
2055 2370 0.955919 GTTTTCCCGGCTCTGGTGAG 60.956 60.000 0.00 0.00 42.96 3.51
2061 2376 0.185175 AACAAGGTTTTCCCGGCTCT 59.815 50.000 0.00 0.00 41.86 4.09
2086 2401 3.120683 GCACGACGATTTTCTGATTGTCA 60.121 43.478 0.00 0.00 39.43 3.58
2091 2406 4.563184 GTCTTAGCACGACGATTTTCTGAT 59.437 41.667 0.00 0.00 0.00 2.90
2099 2414 0.968901 TGGGGTCTTAGCACGACGAT 60.969 55.000 0.00 0.00 32.24 3.73
2113 2428 2.391130 TGTGCTGGTCCTTTGGGGT 61.391 57.895 0.00 0.00 36.25 4.95
2151 2466 7.397892 TTTCGATCTACAACTCTCTTCATCT 57.602 36.000 0.00 0.00 0.00 2.90
2181 2496 5.697633 TCTTCGTTTGTGTGGTTATAGGTTC 59.302 40.000 0.00 0.00 0.00 3.62
2187 2502 3.719924 TCGTCTTCGTTTGTGTGGTTAT 58.280 40.909 0.00 0.00 38.33 1.89
2188 2503 3.162202 TCGTCTTCGTTTGTGTGGTTA 57.838 42.857 0.00 0.00 38.33 2.85
2197 2512 6.073927 GGATCTAGTTTTGTTCGTCTTCGTTT 60.074 38.462 0.00 0.00 38.33 3.60
2245 2561 0.461870 CTTGTGGGATTCGATCGGCA 60.462 55.000 16.41 2.48 0.00 5.69
2246 2562 0.179084 TCTTGTGGGATTCGATCGGC 60.179 55.000 16.41 5.15 0.00 5.54
2262 2579 1.546476 GGTGTGTCTCCGTCAGATCTT 59.454 52.381 0.00 0.00 32.08 2.40
2268 2585 3.773370 GGAGGTGTGTCTCCGTCA 58.227 61.111 0.00 0.00 43.19 4.35
2289 2606 5.172591 GTGCGAATAACATCGTCGAAGAATA 59.827 40.000 4.85 0.07 44.49 1.75
2292 2609 2.850060 GTGCGAATAACATCGTCGAAGA 59.150 45.455 2.86 2.86 44.49 2.87
2300 2617 1.531149 CCCGATGGTGCGAATAACATC 59.469 52.381 0.00 0.00 37.08 3.06
2304 2621 0.528901 CGTCCCGATGGTGCGAATAA 60.529 55.000 0.00 0.00 34.66 1.40
2324 2641 3.878237 ATGTCTCCTACGTCCTATCCA 57.122 47.619 0.00 0.00 0.00 3.41
2349 2666 1.405821 GTGACGATGTCCCTCAGTAGG 59.594 57.143 0.00 0.00 43.25 3.18
2366 2683 2.110213 GGAGTTGTGTGGCGGTGA 59.890 61.111 0.00 0.00 0.00 4.02
2368 2685 1.822186 GTTGGAGTTGTGTGGCGGT 60.822 57.895 0.00 0.00 0.00 5.68
2381 2698 3.593442 AGGTTCAATGTCTTGGTTGGA 57.407 42.857 0.00 0.00 32.95 3.53
2393 2710 7.763985 CCTGTTTTTGTCTTTGTTAGGTTCAAT 59.236 33.333 0.00 0.00 0.00 2.57
2396 2713 6.627243 ACCTGTTTTTGTCTTTGTTAGGTTC 58.373 36.000 0.00 0.00 32.43 3.62


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.