Multiple sequence alignment - TraesCS7B01G411300
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS7B01G411300 | chr7B | 100.000 | 9234 | 0 | 0 | 1 | 9234 | 680006033 | 679996800 | 0.000000e+00 | 17053.0 |
1 | TraesCS7B01G411300 | chr7B | 94.248 | 2851 | 152 | 10 | 4469 | 7314 | 667314670 | 667311827 | 0.000000e+00 | 4346.0 |
2 | TraesCS7B01G411300 | chr7B | 91.771 | 2163 | 142 | 22 | 2196 | 4329 | 667316972 | 667314817 | 0.000000e+00 | 2976.0 |
3 | TraesCS7B01G411300 | chr7B | 83.411 | 428 | 65 | 5 | 8812 | 9234 | 692619932 | 692619506 | 8.690000e-105 | 392.0 |
4 | TraesCS7B01G411300 | chr7B | 98.157 | 217 | 4 | 0 | 2197 | 2413 | 679998843 | 679998627 | 6.770000e-101 | 379.0 |
5 | TraesCS7B01G411300 | chr7B | 87.726 | 277 | 27 | 4 | 991 | 1263 | 679986839 | 679987112 | 5.380000e-82 | 316.0 |
6 | TraesCS7B01G411300 | chr7B | 89.113 | 248 | 27 | 0 | 1771 | 2018 | 679930400 | 679930153 | 9.010000e-80 | 309.0 |
7 | TraesCS7B01G411300 | chr7B | 90.411 | 219 | 17 | 2 | 7408 | 7622 | 679930013 | 679929795 | 1.520000e-72 | 285.0 |
8 | TraesCS7B01G411300 | chr7B | 87.705 | 244 | 30 | 0 | 1784 | 2027 | 680096374 | 680096617 | 1.520000e-72 | 285.0 |
9 | TraesCS7B01G411300 | chr7B | 79.318 | 440 | 43 | 30 | 1084 | 1512 | 680095603 | 680096005 | 1.980000e-66 | 265.0 |
10 | TraesCS7B01G411300 | chr7B | 88.144 | 194 | 14 | 5 | 1314 | 1498 | 679987263 | 679987456 | 1.210000e-53 | 222.0 |
11 | TraesCS7B01G411300 | chr7B | 89.506 | 162 | 17 | 0 | 7408 | 7569 | 680096658 | 680096819 | 1.220000e-48 | 206.0 |
12 | TraesCS7B01G411300 | chr7B | 88.506 | 87 | 10 | 0 | 725 | 811 | 744398533 | 744398447 | 1.270000e-18 | 106.0 |
13 | TraesCS7B01G411300 | chr7B | 92.683 | 41 | 1 | 2 | 1712 | 1751 | 598190448 | 598190409 | 3.600000e-04 | 58.4 |
14 | TraesCS7B01G411300 | chr1A | 89.174 | 5256 | 508 | 42 | 2196 | 7410 | 399241847 | 399236612 | 0.000000e+00 | 6497.0 |
15 | TraesCS7B01G411300 | chr1A | 87.457 | 2336 | 259 | 24 | 2207 | 4521 | 412502838 | 412500516 | 0.000000e+00 | 2660.0 |
16 | TraesCS7B01G411300 | chr1A | 81.675 | 573 | 85 | 16 | 8668 | 9234 | 347328517 | 347327959 | 8.450000e-125 | 459.0 |
17 | TraesCS7B01G411300 | chr6D | 89.043 | 5248 | 499 | 49 | 2197 | 7407 | 14327949 | 14322741 | 0.000000e+00 | 6436.0 |
18 | TraesCS7B01G411300 | chr6D | 89.665 | 4625 | 436 | 30 | 2811 | 7407 | 14354085 | 14358695 | 0.000000e+00 | 5854.0 |
19 | TraesCS7B01G411300 | chr6D | 83.550 | 231 | 23 | 11 | 2197 | 2414 | 14322968 | 14322740 | 1.570000e-47 | 202.0 |
20 | TraesCS7B01G411300 | chr6D | 81.818 | 231 | 27 | 12 | 2197 | 2414 | 14358468 | 14358696 | 7.370000e-41 | 180.0 |
21 | TraesCS7B01G411300 | chr6D | 76.692 | 133 | 30 | 1 | 8669 | 8801 | 145672838 | 145672707 | 1.290000e-08 | 73.1 |
22 | TraesCS7B01G411300 | chr3D | 88.248 | 5131 | 506 | 48 | 2263 | 7349 | 539882951 | 539877874 | 0.000000e+00 | 6045.0 |
23 | TraesCS7B01G411300 | chr3D | 83.681 | 527 | 80 | 5 | 8713 | 9234 | 559133571 | 559133046 | 8.330000e-135 | 492.0 |
24 | TraesCS7B01G411300 | chr3D | 83.037 | 507 | 85 | 1 | 7699 | 8205 | 12299336 | 12298831 | 8.450000e-125 | 459.0 |
25 | TraesCS7B01G411300 | chr3D | 83.037 | 507 | 85 | 1 | 7699 | 8205 | 12375499 | 12376004 | 8.450000e-125 | 459.0 |
26 | TraesCS7B01G411300 | chr3D | 81.727 | 498 | 83 | 8 | 8737 | 9228 | 420307960 | 420307465 | 8.630000e-110 | 409.0 |
27 | TraesCS7B01G411300 | chr3D | 81.489 | 470 | 74 | 12 | 8768 | 9230 | 2460118 | 2459655 | 3.150000e-99 | 374.0 |
28 | TraesCS7B01G411300 | chr3B | 85.857 | 5204 | 613 | 68 | 2197 | 7337 | 776127014 | 776121871 | 0.000000e+00 | 5419.0 |
29 | TraesCS7B01G411300 | chr3B | 92.586 | 2873 | 189 | 9 | 4538 | 7405 | 17395868 | 17398721 | 0.000000e+00 | 4104.0 |
30 | TraesCS7B01G411300 | chr3B | 87.229 | 2952 | 349 | 14 | 4412 | 7342 | 798290690 | 798293634 | 0.000000e+00 | 3338.0 |
31 | TraesCS7B01G411300 | chr3B | 90.886 | 2348 | 195 | 15 | 2207 | 4540 | 17379854 | 17382196 | 0.000000e+00 | 3133.0 |
32 | TraesCS7B01G411300 | chr3B | 82.677 | 508 | 85 | 3 | 7699 | 8205 | 17782993 | 17782488 | 1.830000e-121 | 448.0 |
33 | TraesCS7B01G411300 | chr3B | 87.560 | 209 | 20 | 6 | 2207 | 2411 | 17398515 | 17398721 | 4.310000e-58 | 237.0 |
34 | TraesCS7B01G411300 | chr3B | 84.177 | 158 | 17 | 7 | 2197 | 2348 | 798293479 | 798293634 | 7.470000e-31 | 147.0 |
35 | TraesCS7B01G411300 | chr3B | 89.362 | 47 | 5 | 0 | 1712 | 1758 | 736487248 | 736487202 | 1.000000e-04 | 60.2 |
36 | TraesCS7B01G411300 | chr6B | 91.758 | 3749 | 274 | 15 | 2412 | 6146 | 2106773 | 2110500 | 0.000000e+00 | 5179.0 |
37 | TraesCS7B01G411300 | chr6B | 89.691 | 194 | 11 | 8 | 2227 | 2414 | 2111078 | 2111268 | 1.200000e-58 | 239.0 |
38 | TraesCS7B01G411300 | chr6B | 87.879 | 99 | 12 | 0 | 722 | 820 | 200777237 | 200777335 | 5.860000e-22 | 117.0 |
39 | TraesCS7B01G411300 | chr6B | 89.362 | 47 | 5 | 0 | 1712 | 1758 | 463397298 | 463397252 | 1.000000e-04 | 60.2 |
40 | TraesCS7B01G411300 | chr4D | 86.313 | 4537 | 537 | 46 | 2827 | 7337 | 336703870 | 336699392 | 0.000000e+00 | 4861.0 |
41 | TraesCS7B01G411300 | chr4D | 85.526 | 152 | 12 | 9 | 2197 | 2343 | 336699538 | 336699392 | 5.780000e-32 | 150.0 |
42 | TraesCS7B01G411300 | chr4D | 77.987 | 159 | 32 | 2 | 8669 | 8827 | 90155122 | 90155277 | 7.630000e-16 | 97.1 |
43 | TraesCS7B01G411300 | chr1B | 93.706 | 2860 | 144 | 11 | 4469 | 7314 | 538469431 | 538466594 | 0.000000e+00 | 4252.0 |
44 | TraesCS7B01G411300 | chr1B | 93.399 | 2863 | 145 | 18 | 4469 | 7314 | 633020071 | 633017236 | 0.000000e+00 | 4200.0 |
45 | TraesCS7B01G411300 | chr1B | 91.590 | 2164 | 148 | 20 | 2194 | 4329 | 633022375 | 633020218 | 0.000000e+00 | 2957.0 |
46 | TraesCS7B01G411300 | chr1B | 91.578 | 2161 | 149 | 19 | 2197 | 4329 | 538471733 | 538469578 | 0.000000e+00 | 2952.0 |
47 | TraesCS7B01G411300 | chr1B | 86.957 | 92 | 12 | 0 | 725 | 816 | 605261311 | 605261220 | 4.560000e-18 | 104.0 |
48 | TraesCS7B01G411300 | chr7A | 85.140 | 2961 | 405 | 21 | 4395 | 7339 | 176196311 | 176193370 | 0.000000e+00 | 2998.0 |
49 | TraesCS7B01G411300 | chr7A | 93.588 | 967 | 61 | 1 | 7408 | 8374 | 692615949 | 692614984 | 0.000000e+00 | 1441.0 |
50 | TraesCS7B01G411300 | chr7A | 91.120 | 991 | 48 | 12 | 1222 | 2196 | 692616911 | 692615945 | 0.000000e+00 | 1306.0 |
51 | TraesCS7B01G411300 | chr7A | 83.021 | 960 | 136 | 13 | 7408 | 8349 | 692613263 | 692614213 | 0.000000e+00 | 845.0 |
52 | TraesCS7B01G411300 | chr7A | 88.338 | 686 | 79 | 1 | 7663 | 8348 | 692522059 | 692521375 | 0.000000e+00 | 822.0 |
53 | TraesCS7B01G411300 | chr7A | 85.413 | 569 | 52 | 15 | 942 | 1498 | 692523442 | 692522893 | 6.260000e-156 | 562.0 |
54 | TraesCS7B01G411300 | chr7A | 90.201 | 398 | 32 | 3 | 560 | 951 | 692617795 | 692617399 | 6.390000e-141 | 512.0 |
55 | TraesCS7B01G411300 | chr7A | 94.175 | 309 | 14 | 3 | 224 | 528 | 692618093 | 692617785 | 1.400000e-127 | 468.0 |
56 | TraesCS7B01G411300 | chr7A | 88.963 | 299 | 33 | 0 | 940 | 1238 | 692617225 | 692616927 | 4.070000e-98 | 370.0 |
57 | TraesCS7B01G411300 | chr7A | 87.692 | 260 | 28 | 3 | 1771 | 2026 | 692522801 | 692522542 | 5.420000e-77 | 300.0 |
58 | TraesCS7B01G411300 | chr7A | 86.567 | 268 | 36 | 0 | 940 | 1207 | 692611348 | 692611615 | 7.010000e-76 | 296.0 |
59 | TraesCS7B01G411300 | chr7A | 91.204 | 216 | 15 | 2 | 7408 | 7619 | 692522275 | 692522060 | 3.260000e-74 | 291.0 |
60 | TraesCS7B01G411300 | chr7A | 86.328 | 256 | 32 | 3 | 1781 | 2035 | 692612922 | 692613175 | 9.130000e-70 | 276.0 |
61 | TraesCS7B01G411300 | chr7A | 81.882 | 287 | 34 | 8 | 1216 | 1498 | 692612622 | 692612894 | 9.330000e-55 | 226.0 |
62 | TraesCS7B01G411300 | chr7A | 87.565 | 193 | 21 | 1 | 1784 | 1973 | 692800045 | 692800237 | 4.340000e-53 | 220.0 |
63 | TraesCS7B01G411300 | chr7A | 85.930 | 199 | 16 | 2 | 1312 | 1498 | 692762410 | 692762608 | 1.570000e-47 | 202.0 |
64 | TraesCS7B01G411300 | chr7A | 87.273 | 165 | 18 | 3 | 7406 | 7569 | 692769986 | 692770148 | 1.580000e-42 | 185.0 |
65 | TraesCS7B01G411300 | chr7A | 94.624 | 93 | 5 | 0 | 149 | 241 | 692618200 | 692618108 | 2.690000e-30 | 145.0 |
66 | TraesCS7B01G411300 | chr7A | 93.671 | 79 | 5 | 0 | 8498 | 8576 | 692614997 | 692614919 | 1.630000e-22 | 119.0 |
67 | TraesCS7B01G411300 | chr7A | 89.655 | 87 | 9 | 0 | 725 | 811 | 735412115 | 735412201 | 2.730000e-20 | 111.0 |
68 | TraesCS7B01G411300 | chr7A | 76.692 | 133 | 29 | 2 | 8669 | 8799 | 228953103 | 228952971 | 1.290000e-08 | 73.1 |
69 | TraesCS7B01G411300 | chr4A | 87.610 | 2397 | 263 | 25 | 2194 | 4563 | 607356175 | 607353786 | 0.000000e+00 | 2750.0 |
70 | TraesCS7B01G411300 | chr5B | 84.761 | 2638 | 365 | 27 | 4638 | 7248 | 684123703 | 684121076 | 0.000000e+00 | 2610.0 |
71 | TraesCS7B01G411300 | chr5B | 76.730 | 159 | 33 | 3 | 8669 | 8827 | 286359452 | 286359606 | 1.650000e-12 | 86.1 |
72 | TraesCS7B01G411300 | chr2B | 86.812 | 1744 | 206 | 13 | 5518 | 7248 | 698077765 | 698076033 | 0.000000e+00 | 1925.0 |
73 | TraesCS7B01G411300 | chr2B | 86.000 | 100 | 12 | 2 | 714 | 811 | 90719934 | 90720033 | 1.270000e-18 | 106.0 |
74 | TraesCS7B01G411300 | chr2B | 89.362 | 47 | 5 | 0 | 1712 | 1758 | 622905955 | 622905909 | 1.000000e-04 | 60.2 |
75 | TraesCS7B01G411300 | chr7D | 88.047 | 686 | 81 | 1 | 7663 | 8348 | 600702372 | 600701688 | 0.000000e+00 | 811.0 |
76 | TraesCS7B01G411300 | chr7D | 83.221 | 739 | 109 | 6 | 7625 | 8349 | 600755532 | 600756269 | 0.000000e+00 | 664.0 |
77 | TraesCS7B01G411300 | chr7D | 85.066 | 529 | 50 | 15 | 991 | 1498 | 600703656 | 600703136 | 6.390000e-141 | 512.0 |
78 | TraesCS7B01G411300 | chr7D | 84.630 | 540 | 56 | 15 | 940 | 1463 | 600748420 | 600748948 | 6.390000e-141 | 512.0 |
79 | TraesCS7B01G411300 | chr7D | 81.463 | 588 | 94 | 12 | 7626 | 8205 | 600874919 | 600875499 | 1.400000e-127 | 468.0 |
80 | TraesCS7B01G411300 | chr7D | 84.870 | 423 | 55 | 7 | 8810 | 9225 | 607028100 | 607028520 | 1.430000e-112 | 418.0 |
81 | TraesCS7B01G411300 | chr7D | 88.846 | 260 | 25 | 3 | 1771 | 2026 | 600703047 | 600702788 | 5.380000e-82 | 316.0 |
82 | TraesCS7B01G411300 | chr7D | 78.981 | 471 | 50 | 25 | 1057 | 1498 | 600873664 | 600874114 | 9.130000e-70 | 276.0 |
83 | TraesCS7B01G411300 | chr7D | 87.336 | 229 | 28 | 1 | 1781 | 2009 | 600874421 | 600874648 | 2.560000e-65 | 261.0 |
84 | TraesCS7B01G411300 | chr7D | 92.308 | 169 | 13 | 0 | 7408 | 7576 | 600754040 | 600754208 | 3.330000e-59 | 241.0 |
85 | TraesCS7B01G411300 | chr7D | 88.506 | 87 | 10 | 0 | 725 | 811 | 632327977 | 632327891 | 1.270000e-18 | 106.0 |
86 | TraesCS7B01G411300 | chr7D | 78.571 | 154 | 30 | 2 | 8674 | 8827 | 603546589 | 603546739 | 2.120000e-16 | 99.0 |
87 | TraesCS7B01G411300 | chr7D | 80.870 | 115 | 17 | 4 | 809 | 921 | 54358192 | 54358081 | 1.650000e-12 | 86.1 |
88 | TraesCS7B01G411300 | chr3A | 82.969 | 458 | 74 | 4 | 8774 | 9228 | 123902480 | 123902936 | 2.400000e-110 | 411.0 |
89 | TraesCS7B01G411300 | chr3A | 81.702 | 470 | 70 | 15 | 8772 | 9231 | 69264247 | 69264710 | 2.430000e-100 | 377.0 |
90 | TraesCS7B01G411300 | chr1D | 81.746 | 504 | 77 | 7 | 8734 | 9234 | 372566166 | 372565675 | 3.100000e-109 | 407.0 |
91 | TraesCS7B01G411300 | chr5D | 89.655 | 87 | 9 | 0 | 725 | 811 | 65990502 | 65990588 | 2.730000e-20 | 111.0 |
92 | TraesCS7B01G411300 | chr4B | 88.506 | 87 | 9 | 1 | 725 | 811 | 9957759 | 9957844 | 4.560000e-18 | 104.0 |
93 | TraesCS7B01G411300 | chr2D | 79.688 | 128 | 26 | 0 | 8669 | 8796 | 584109975 | 584110102 | 9.870000e-15 | 93.5 |
94 | TraesCS7B01G411300 | chr2A | 78.899 | 109 | 23 | 0 | 8674 | 8782 | 196975406 | 196975298 | 3.580000e-09 | 75.0 |
95 | TraesCS7B01G411300 | chr2A | 74.843 | 159 | 37 | 2 | 8669 | 8827 | 169510840 | 169510685 | 1.660000e-07 | 69.4 |
96 | TraesCS7B01G411300 | chrUn | 86.885 | 61 | 6 | 2 | 1692 | 1750 | 301350795 | 301350855 | 5.980000e-07 | 67.6 |
97 | TraesCS7B01G411300 | chrUn | 86.885 | 61 | 6 | 2 | 1692 | 1750 | 348117440 | 348117380 | 5.980000e-07 | 67.6 |
98 | TraesCS7B01G411300 | chrUn | 97.059 | 34 | 1 | 0 | 1715 | 1748 | 287635310 | 287635277 | 3.600000e-04 | 58.4 |
99 | TraesCS7B01G411300 | chrUn | 94.595 | 37 | 2 | 0 | 1712 | 1748 | 292970701 | 292970737 | 3.600000e-04 | 58.4 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS7B01G411300 | chr7B | 679996800 | 680006033 | 9233 | True | 17053.000000 | 17053 | 100.000000 | 1 | 9234 | 1 | chr7B.!!$R2 | 9233 |
1 | TraesCS7B01G411300 | chr7B | 667311827 | 667316972 | 5145 | True | 3661.000000 | 4346 | 93.009500 | 2196 | 7314 | 2 | chr7B.!!$R6 | 5118 |
2 | TraesCS7B01G411300 | chr7B | 679929795 | 679930400 | 605 | True | 297.000000 | 309 | 89.762000 | 1771 | 7622 | 2 | chr7B.!!$R7 | 5851 |
3 | TraesCS7B01G411300 | chr7B | 679986839 | 679987456 | 617 | False | 269.000000 | 316 | 87.935000 | 991 | 1498 | 2 | chr7B.!!$F1 | 507 |
4 | TraesCS7B01G411300 | chr7B | 680095603 | 680096819 | 1216 | False | 252.000000 | 285 | 85.509667 | 1084 | 7569 | 3 | chr7B.!!$F2 | 6485 |
5 | TraesCS7B01G411300 | chr1A | 399236612 | 399241847 | 5235 | True | 6497.000000 | 6497 | 89.174000 | 2196 | 7410 | 1 | chr1A.!!$R2 | 5214 |
6 | TraesCS7B01G411300 | chr1A | 412500516 | 412502838 | 2322 | True | 2660.000000 | 2660 | 87.457000 | 2207 | 4521 | 1 | chr1A.!!$R3 | 2314 |
7 | TraesCS7B01G411300 | chr1A | 347327959 | 347328517 | 558 | True | 459.000000 | 459 | 81.675000 | 8668 | 9234 | 1 | chr1A.!!$R1 | 566 |
8 | TraesCS7B01G411300 | chr6D | 14322740 | 14327949 | 5209 | True | 3319.000000 | 6436 | 86.296500 | 2197 | 7407 | 2 | chr6D.!!$R2 | 5210 |
9 | TraesCS7B01G411300 | chr6D | 14354085 | 14358696 | 4611 | False | 3017.000000 | 5854 | 85.741500 | 2197 | 7407 | 2 | chr6D.!!$F1 | 5210 |
10 | TraesCS7B01G411300 | chr3D | 539877874 | 539882951 | 5077 | True | 6045.000000 | 6045 | 88.248000 | 2263 | 7349 | 1 | chr3D.!!$R4 | 5086 |
11 | TraesCS7B01G411300 | chr3D | 559133046 | 559133571 | 525 | True | 492.000000 | 492 | 83.681000 | 8713 | 9234 | 1 | chr3D.!!$R5 | 521 |
12 | TraesCS7B01G411300 | chr3D | 12298831 | 12299336 | 505 | True | 459.000000 | 459 | 83.037000 | 7699 | 8205 | 1 | chr3D.!!$R2 | 506 |
13 | TraesCS7B01G411300 | chr3D | 12375499 | 12376004 | 505 | False | 459.000000 | 459 | 83.037000 | 7699 | 8205 | 1 | chr3D.!!$F1 | 506 |
14 | TraesCS7B01G411300 | chr3B | 776121871 | 776127014 | 5143 | True | 5419.000000 | 5419 | 85.857000 | 2197 | 7337 | 1 | chr3B.!!$R3 | 5140 |
15 | TraesCS7B01G411300 | chr3B | 17379854 | 17382196 | 2342 | False | 3133.000000 | 3133 | 90.886000 | 2207 | 4540 | 1 | chr3B.!!$F1 | 2333 |
16 | TraesCS7B01G411300 | chr3B | 17395868 | 17398721 | 2853 | False | 2170.500000 | 4104 | 90.073000 | 2207 | 7405 | 2 | chr3B.!!$F2 | 5198 |
17 | TraesCS7B01G411300 | chr3B | 798290690 | 798293634 | 2944 | False | 1742.500000 | 3338 | 85.703000 | 2197 | 7342 | 2 | chr3B.!!$F3 | 5145 |
18 | TraesCS7B01G411300 | chr3B | 17782488 | 17782993 | 505 | True | 448.000000 | 448 | 82.677000 | 7699 | 8205 | 1 | chr3B.!!$R1 | 506 |
19 | TraesCS7B01G411300 | chr6B | 2106773 | 2111268 | 4495 | False | 2709.000000 | 5179 | 90.724500 | 2227 | 6146 | 2 | chr6B.!!$F2 | 3919 |
20 | TraesCS7B01G411300 | chr4D | 336699392 | 336703870 | 4478 | True | 4861.000000 | 4861 | 86.313000 | 2827 | 7337 | 1 | chr4D.!!$R1 | 4510 |
21 | TraesCS7B01G411300 | chr1B | 538466594 | 538471733 | 5139 | True | 3602.000000 | 4252 | 92.642000 | 2197 | 7314 | 2 | chr1B.!!$R2 | 5117 |
22 | TraesCS7B01G411300 | chr1B | 633017236 | 633022375 | 5139 | True | 3578.500000 | 4200 | 92.494500 | 2194 | 7314 | 2 | chr1B.!!$R3 | 5120 |
23 | TraesCS7B01G411300 | chr7A | 176193370 | 176196311 | 2941 | True | 2998.000000 | 2998 | 85.140000 | 4395 | 7339 | 1 | chr7A.!!$R1 | 2944 |
24 | TraesCS7B01G411300 | chr7A | 692614919 | 692618200 | 3281 | True | 623.000000 | 1441 | 92.334571 | 149 | 8576 | 7 | chr7A.!!$R4 | 8427 |
25 | TraesCS7B01G411300 | chr7A | 692521375 | 692523442 | 2067 | True | 493.750000 | 822 | 88.161750 | 942 | 8348 | 4 | chr7A.!!$R3 | 7406 |
26 | TraesCS7B01G411300 | chr7A | 692611348 | 692614213 | 2865 | False | 410.750000 | 845 | 84.449500 | 940 | 8349 | 4 | chr7A.!!$F5 | 7409 |
27 | TraesCS7B01G411300 | chr4A | 607353786 | 607356175 | 2389 | True | 2750.000000 | 2750 | 87.610000 | 2194 | 4563 | 1 | chr4A.!!$R1 | 2369 |
28 | TraesCS7B01G411300 | chr5B | 684121076 | 684123703 | 2627 | True | 2610.000000 | 2610 | 84.761000 | 4638 | 7248 | 1 | chr5B.!!$R1 | 2610 |
29 | TraesCS7B01G411300 | chr2B | 698076033 | 698077765 | 1732 | True | 1925.000000 | 1925 | 86.812000 | 5518 | 7248 | 1 | chr2B.!!$R2 | 1730 |
30 | TraesCS7B01G411300 | chr7D | 600701688 | 600703656 | 1968 | True | 546.333333 | 811 | 87.319667 | 991 | 8348 | 3 | chr7D.!!$R3 | 7357 |
31 | TraesCS7B01G411300 | chr7D | 600748420 | 600748948 | 528 | False | 512.000000 | 512 | 84.630000 | 940 | 1463 | 1 | chr7D.!!$F1 | 523 |
32 | TraesCS7B01G411300 | chr7D | 600754040 | 600756269 | 2229 | False | 452.500000 | 664 | 87.764500 | 7408 | 8349 | 2 | chr7D.!!$F4 | 941 |
33 | TraesCS7B01G411300 | chr7D | 600873664 | 600875499 | 1835 | False | 335.000000 | 468 | 82.593333 | 1057 | 8205 | 3 | chr7D.!!$F5 | 7148 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
212 | 213 | 0.031721 | GGCTATGGGTTCGAGTACCG | 59.968 | 60.0 | 0.24 | 0.00 | 39.18 | 4.02 | F |
970 | 1197 | 0.180406 | TAAAGCCAAGGGATCTCGGC | 59.820 | 55.0 | 3.40 | 3.40 | 45.23 | 5.54 | F |
1757 | 3158 | 0.103208 | GAGGGAGTACATGACAGGCG | 59.897 | 60.0 | 0.00 | 0.00 | 0.00 | 5.52 | F |
2345 | 4329 | 0.252197 | AACAGCCCAACCGATCCTAC | 59.748 | 55.0 | 0.00 | 0.00 | 0.00 | 3.18 | F |
3196 | 5213 | 0.749091 | TCATCCCAATGCGCTGAAGG | 60.749 | 55.0 | 9.73 | 4.73 | 32.58 | 3.46 | F |
3790 | 5811 | 0.321210 | TGTACCTGTCAATGGTGCCG | 60.321 | 55.0 | 0.00 | 0.00 | 39.04 | 5.69 | F |
4543 | 6651 | 0.765510 | GATACTCCCCGCCCAAATCT | 59.234 | 55.0 | 0.00 | 0.00 | 0.00 | 2.40 | F |
5161 | 7280 | 1.056660 | GGGAGAGACCAACTTCCACA | 58.943 | 55.0 | 0.00 | 0.00 | 41.20 | 4.17 | F |
6464 | 8687 | 0.456312 | GAGTGATTCGGCGAGAACGT | 60.456 | 55.0 | 10.46 | 0.00 | 42.39 | 3.99 | F |
7766 | 11351 | 0.250727 | CTTCTTCCCCGTCAAGCCAA | 60.251 | 55.0 | 0.00 | 0.00 | 0.00 | 4.52 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1738 | 3139 | 0.103208 | CGCCTGTCATGTACTCCCTC | 59.897 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 | R |
2263 | 4235 | 0.179092 | ACCGCCTACCGCTTGTAATC | 60.179 | 55.000 | 0.00 | 0.00 | 35.03 | 1.75 | R |
3449 | 5470 | 0.843309 | TCCAAGTTGCAGTCCCTTGA | 59.157 | 50.000 | 15.05 | 3.79 | 38.23 | 3.02 | R |
3476 | 5497 | 0.970937 | CCCCGAGCTTGGTACTCTCA | 60.971 | 60.000 | 19.14 | 0.00 | 31.71 | 3.27 | R |
4077 | 6099 | 1.726248 | CAAAACCGGCTGCAAATTAGC | 59.274 | 47.619 | 0.00 | 0.00 | 40.41 | 3.09 | R |
5693 | 7821 | 1.166531 | GCAAGGTGCTCCTCAACGTT | 61.167 | 55.000 | 7.99 | 0.00 | 44.35 | 3.99 | R |
6165 | 8351 | 1.010125 | CAACAACGTCTGCAACCCG | 60.010 | 57.895 | 0.00 | 0.00 | 0.00 | 5.28 | R |
6665 | 8888 | 2.025037 | ACCAAGATGAAGGGCATTGCTA | 60.025 | 45.455 | 8.82 | 0.00 | 37.34 | 3.49 | R |
7766 | 11351 | 0.035739 | ATGAACTTGCCGTAACCCGT | 59.964 | 50.000 | 0.00 | 0.00 | 33.66 | 5.28 | R |
9200 | 12818 | 0.036952 | CCTCCTCGCCGCATTCATAT | 60.037 | 55.000 | 0.00 | 0.00 | 0.00 | 1.78 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
38 | 39 | 9.681062 | ACTGTATAATACAACATAAAAGGTGCT | 57.319 | 29.630 | 0.00 | 0.00 | 38.38 | 4.40 |
42 | 43 | 3.824414 | ACAACATAAAAGGTGCTACGC | 57.176 | 42.857 | 0.00 | 0.00 | 0.00 | 4.42 |
43 | 44 | 2.486592 | ACAACATAAAAGGTGCTACGCC | 59.513 | 45.455 | 0.00 | 0.00 | 0.00 | 5.68 |
44 | 45 | 2.483014 | ACATAAAAGGTGCTACGCCA | 57.517 | 45.000 | 0.00 | 0.00 | 36.32 | 5.69 |
45 | 46 | 2.081462 | ACATAAAAGGTGCTACGCCAC | 58.919 | 47.619 | 0.00 | 0.00 | 36.32 | 5.01 |
52 | 53 | 3.220447 | GTGCTACGCCACCTACAAA | 57.780 | 52.632 | 0.00 | 0.00 | 0.00 | 2.83 |
53 | 54 | 1.734163 | GTGCTACGCCACCTACAAAT | 58.266 | 50.000 | 0.00 | 0.00 | 0.00 | 2.32 |
54 | 55 | 2.081462 | GTGCTACGCCACCTACAAATT | 58.919 | 47.619 | 0.00 | 0.00 | 0.00 | 1.82 |
55 | 56 | 2.486592 | GTGCTACGCCACCTACAAATTT | 59.513 | 45.455 | 0.00 | 0.00 | 0.00 | 1.82 |
56 | 57 | 3.685756 | GTGCTACGCCACCTACAAATTTA | 59.314 | 43.478 | 0.00 | 0.00 | 0.00 | 1.40 |
57 | 58 | 3.936453 | TGCTACGCCACCTACAAATTTAG | 59.064 | 43.478 | 0.00 | 0.00 | 0.00 | 1.85 |
58 | 59 | 4.186159 | GCTACGCCACCTACAAATTTAGA | 58.814 | 43.478 | 0.00 | 0.00 | 0.00 | 2.10 |
59 | 60 | 4.814771 | GCTACGCCACCTACAAATTTAGAT | 59.185 | 41.667 | 0.00 | 0.00 | 0.00 | 1.98 |
60 | 61 | 5.050295 | GCTACGCCACCTACAAATTTAGATC | 60.050 | 44.000 | 0.00 | 0.00 | 0.00 | 2.75 |
61 | 62 | 4.839121 | ACGCCACCTACAAATTTAGATCA | 58.161 | 39.130 | 0.00 | 0.00 | 0.00 | 2.92 |
62 | 63 | 5.437060 | ACGCCACCTACAAATTTAGATCAT | 58.563 | 37.500 | 0.00 | 0.00 | 0.00 | 2.45 |
63 | 64 | 6.588204 | ACGCCACCTACAAATTTAGATCATA | 58.412 | 36.000 | 0.00 | 0.00 | 0.00 | 2.15 |
64 | 65 | 6.482308 | ACGCCACCTACAAATTTAGATCATAC | 59.518 | 38.462 | 0.00 | 0.00 | 0.00 | 2.39 |
65 | 66 | 6.481976 | CGCCACCTACAAATTTAGATCATACA | 59.518 | 38.462 | 0.00 | 0.00 | 0.00 | 2.29 |
66 | 67 | 7.307396 | CGCCACCTACAAATTTAGATCATACAG | 60.307 | 40.741 | 0.00 | 0.00 | 0.00 | 2.74 |
67 | 68 | 7.715249 | GCCACCTACAAATTTAGATCATACAGA | 59.285 | 37.037 | 0.00 | 0.00 | 0.00 | 3.41 |
68 | 69 | 9.046296 | CCACCTACAAATTTAGATCATACAGAC | 57.954 | 37.037 | 0.00 | 0.00 | 0.00 | 3.51 |
69 | 70 | 8.755941 | CACCTACAAATTTAGATCATACAGACG | 58.244 | 37.037 | 0.00 | 0.00 | 0.00 | 4.18 |
70 | 71 | 8.475639 | ACCTACAAATTTAGATCATACAGACGT | 58.524 | 33.333 | 0.00 | 0.00 | 0.00 | 4.34 |
71 | 72 | 8.755941 | CCTACAAATTTAGATCATACAGACGTG | 58.244 | 37.037 | 0.00 | 0.00 | 0.00 | 4.49 |
72 | 73 | 9.516314 | CTACAAATTTAGATCATACAGACGTGA | 57.484 | 33.333 | 0.00 | 0.00 | 0.00 | 4.35 |
73 | 74 | 8.186178 | ACAAATTTAGATCATACAGACGTGAC | 57.814 | 34.615 | 0.00 | 0.00 | 0.00 | 3.67 |
74 | 75 | 7.277981 | ACAAATTTAGATCATACAGACGTGACC | 59.722 | 37.037 | 0.00 | 0.00 | 0.00 | 4.02 |
75 | 76 | 6.716934 | ATTTAGATCATACAGACGTGACCT | 57.283 | 37.500 | 0.00 | 0.00 | 0.00 | 3.85 |
76 | 77 | 5.752892 | TTAGATCATACAGACGTGACCTC | 57.247 | 43.478 | 0.00 | 0.00 | 0.00 | 3.85 |
77 | 78 | 3.621558 | AGATCATACAGACGTGACCTCA | 58.378 | 45.455 | 0.00 | 0.00 | 0.00 | 3.86 |
78 | 79 | 3.378742 | AGATCATACAGACGTGACCTCAC | 59.621 | 47.826 | 0.00 | 0.00 | 43.15 | 3.51 |
79 | 80 | 2.791655 | TCATACAGACGTGACCTCACT | 58.208 | 47.619 | 0.00 | 0.00 | 44.34 | 3.41 |
80 | 81 | 2.488153 | TCATACAGACGTGACCTCACTG | 59.512 | 50.000 | 0.00 | 0.00 | 44.34 | 3.66 |
81 | 82 | 2.265589 | TACAGACGTGACCTCACTGA | 57.734 | 50.000 | 0.00 | 0.00 | 44.34 | 3.41 |
82 | 83 | 1.399714 | ACAGACGTGACCTCACTGAA | 58.600 | 50.000 | 0.00 | 0.00 | 44.34 | 3.02 |
83 | 84 | 1.964223 | ACAGACGTGACCTCACTGAAT | 59.036 | 47.619 | 0.00 | 0.00 | 44.34 | 2.57 |
84 | 85 | 2.365617 | ACAGACGTGACCTCACTGAATT | 59.634 | 45.455 | 0.00 | 0.00 | 44.34 | 2.17 |
85 | 86 | 3.181465 | ACAGACGTGACCTCACTGAATTT | 60.181 | 43.478 | 0.00 | 0.00 | 44.34 | 1.82 |
86 | 87 | 3.809832 | CAGACGTGACCTCACTGAATTTT | 59.190 | 43.478 | 0.00 | 0.00 | 44.34 | 1.82 |
87 | 88 | 3.809832 | AGACGTGACCTCACTGAATTTTG | 59.190 | 43.478 | 0.00 | 0.00 | 44.34 | 2.44 |
88 | 89 | 2.290641 | ACGTGACCTCACTGAATTTTGC | 59.709 | 45.455 | 4.00 | 0.00 | 44.34 | 3.68 |
89 | 90 | 2.549754 | CGTGACCTCACTGAATTTTGCT | 59.450 | 45.455 | 4.00 | 0.00 | 44.34 | 3.91 |
90 | 91 | 3.003689 | CGTGACCTCACTGAATTTTGCTT | 59.996 | 43.478 | 4.00 | 0.00 | 44.34 | 3.91 |
91 | 92 | 4.498009 | CGTGACCTCACTGAATTTTGCTTT | 60.498 | 41.667 | 4.00 | 0.00 | 44.34 | 3.51 |
92 | 93 | 5.277779 | CGTGACCTCACTGAATTTTGCTTTA | 60.278 | 40.000 | 4.00 | 0.00 | 44.34 | 1.85 |
93 | 94 | 6.503524 | GTGACCTCACTGAATTTTGCTTTAA | 58.496 | 36.000 | 0.00 | 0.00 | 43.25 | 1.52 |
94 | 95 | 6.978080 | GTGACCTCACTGAATTTTGCTTTAAA | 59.022 | 34.615 | 0.00 | 0.00 | 43.25 | 1.52 |
95 | 96 | 7.491048 | GTGACCTCACTGAATTTTGCTTTAAAA | 59.509 | 33.333 | 0.00 | 0.00 | 43.25 | 1.52 |
96 | 97 | 8.037758 | TGACCTCACTGAATTTTGCTTTAAAAA | 58.962 | 29.630 | 0.00 | 0.00 | 41.29 | 1.94 |
117 | 118 | 5.966742 | AAAGAACCAAAACTATCTCTGGC | 57.033 | 39.130 | 0.00 | 0.00 | 31.74 | 4.85 |
118 | 119 | 3.600388 | AGAACCAAAACTATCTCTGGCG | 58.400 | 45.455 | 0.00 | 0.00 | 31.74 | 5.69 |
119 | 120 | 3.260884 | AGAACCAAAACTATCTCTGGCGA | 59.739 | 43.478 | 0.00 | 0.00 | 31.74 | 5.54 |
120 | 121 | 3.914426 | ACCAAAACTATCTCTGGCGAT | 57.086 | 42.857 | 0.00 | 0.00 | 31.74 | 4.58 |
121 | 122 | 4.222124 | ACCAAAACTATCTCTGGCGATT | 57.778 | 40.909 | 0.00 | 0.00 | 31.74 | 3.34 |
122 | 123 | 5.353394 | ACCAAAACTATCTCTGGCGATTA | 57.647 | 39.130 | 0.00 | 0.00 | 31.74 | 1.75 |
123 | 124 | 5.116882 | ACCAAAACTATCTCTGGCGATTAC | 58.883 | 41.667 | 0.00 | 0.00 | 31.74 | 1.89 |
124 | 125 | 5.104900 | ACCAAAACTATCTCTGGCGATTACT | 60.105 | 40.000 | 0.00 | 0.00 | 31.74 | 2.24 |
125 | 126 | 5.235186 | CCAAAACTATCTCTGGCGATTACTG | 59.765 | 44.000 | 0.00 | 0.00 | 0.00 | 2.74 |
126 | 127 | 4.592485 | AACTATCTCTGGCGATTACTGG | 57.408 | 45.455 | 0.00 | 0.00 | 0.00 | 4.00 |
127 | 128 | 3.567397 | ACTATCTCTGGCGATTACTGGT | 58.433 | 45.455 | 0.00 | 0.00 | 0.00 | 4.00 |
128 | 129 | 3.570550 | ACTATCTCTGGCGATTACTGGTC | 59.429 | 47.826 | 0.00 | 0.00 | 0.00 | 4.02 |
129 | 130 | 2.145397 | TCTCTGGCGATTACTGGTCT | 57.855 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
130 | 131 | 3.292492 | TCTCTGGCGATTACTGGTCTA | 57.708 | 47.619 | 0.00 | 0.00 | 0.00 | 2.59 |
131 | 132 | 3.215151 | TCTCTGGCGATTACTGGTCTAG | 58.785 | 50.000 | 0.00 | 0.00 | 0.00 | 2.43 |
132 | 133 | 1.681793 | TCTGGCGATTACTGGTCTAGC | 59.318 | 52.381 | 0.00 | 0.00 | 0.00 | 3.42 |
133 | 134 | 1.683917 | CTGGCGATTACTGGTCTAGCT | 59.316 | 52.381 | 0.00 | 0.00 | 0.00 | 3.32 |
134 | 135 | 1.681793 | TGGCGATTACTGGTCTAGCTC | 59.318 | 52.381 | 0.00 | 0.00 | 0.00 | 4.09 |
135 | 136 | 1.957877 | GGCGATTACTGGTCTAGCTCT | 59.042 | 52.381 | 0.00 | 0.00 | 0.00 | 4.09 |
136 | 137 | 2.362717 | GGCGATTACTGGTCTAGCTCTT | 59.637 | 50.000 | 0.00 | 0.00 | 0.00 | 2.85 |
137 | 138 | 3.376540 | GCGATTACTGGTCTAGCTCTTG | 58.623 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
138 | 139 | 3.797184 | GCGATTACTGGTCTAGCTCTTGG | 60.797 | 52.174 | 0.00 | 0.00 | 0.00 | 3.61 |
139 | 140 | 3.243569 | CGATTACTGGTCTAGCTCTTGGG | 60.244 | 52.174 | 0.00 | 0.00 | 0.00 | 4.12 |
140 | 141 | 2.160721 | TACTGGTCTAGCTCTTGGGG | 57.839 | 55.000 | 0.00 | 0.00 | 0.00 | 4.96 |
141 | 142 | 0.618968 | ACTGGTCTAGCTCTTGGGGG | 60.619 | 60.000 | 0.00 | 0.00 | 0.00 | 5.40 |
169 | 170 | 3.486263 | GCAAATAGGAGCGCACGT | 58.514 | 55.556 | 11.47 | 7.93 | 0.00 | 4.49 |
212 | 213 | 0.031721 | GGCTATGGGTTCGAGTACCG | 59.968 | 60.000 | 0.24 | 0.00 | 39.18 | 4.02 |
250 | 283 | 3.180189 | CGTGTCGCTTCTTAAAACGTGTA | 59.820 | 43.478 | 0.00 | 0.00 | 0.00 | 2.90 |
257 | 290 | 4.453136 | GCTTCTTAAAACGTGTATGTCCCA | 59.547 | 41.667 | 0.00 | 0.00 | 0.00 | 4.37 |
275 | 308 | 4.455877 | GTCCCATGGAGTAAACACAAAGAG | 59.544 | 45.833 | 15.22 | 0.00 | 29.39 | 2.85 |
293 | 326 | 2.634940 | AGAGTGAAGAAAGCTAGTGGCA | 59.365 | 45.455 | 0.00 | 0.00 | 44.79 | 4.92 |
299 | 332 | 1.834263 | AGAAAGCTAGTGGCAGGTAGG | 59.166 | 52.381 | 0.00 | 0.00 | 44.79 | 3.18 |
339 | 372 | 9.958125 | AAGGGGGAAGAAGATTGAAATTATAAT | 57.042 | 29.630 | 0.00 | 0.00 | 0.00 | 1.28 |
340 | 373 | 9.593565 | AGGGGGAAGAAGATTGAAATTATAATC | 57.406 | 33.333 | 0.00 | 6.51 | 34.34 | 1.75 |
379 | 413 | 3.887110 | TCTTCCATGCATCAACATCATCC | 59.113 | 43.478 | 0.00 | 0.00 | 0.00 | 3.51 |
413 | 447 | 4.457496 | CTGCGGCCATCGTCAGGT | 62.457 | 66.667 | 2.24 | 0.00 | 41.72 | 4.00 |
453 | 487 | 1.880340 | GCATCGGTCGCTCCTTGAG | 60.880 | 63.158 | 0.00 | 0.00 | 0.00 | 3.02 |
510 | 547 | 5.721960 | AGCATAAGAAGAGACTACCTTTCCA | 59.278 | 40.000 | 0.00 | 0.00 | 0.00 | 3.53 |
521 | 558 | 7.676468 | AGAGACTACCTTTCCAATTTCTCTACT | 59.324 | 37.037 | 0.00 | 0.00 | 37.43 | 2.57 |
522 | 559 | 8.896722 | AGACTACCTTTCCAATTTCTCTACTA | 57.103 | 34.615 | 0.00 | 0.00 | 0.00 | 1.82 |
523 | 560 | 8.751242 | AGACTACCTTTCCAATTTCTCTACTAC | 58.249 | 37.037 | 0.00 | 0.00 | 0.00 | 2.73 |
524 | 561 | 8.667592 | ACTACCTTTCCAATTTCTCTACTACT | 57.332 | 34.615 | 0.00 | 0.00 | 0.00 | 2.57 |
525 | 562 | 9.765295 | ACTACCTTTCCAATTTCTCTACTACTA | 57.235 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
527 | 564 | 8.667592 | ACCTTTCCAATTTCTCTACTACTACT | 57.332 | 34.615 | 0.00 | 0.00 | 0.00 | 2.57 |
528 | 565 | 9.765295 | ACCTTTCCAATTTCTCTACTACTACTA | 57.235 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
633 | 670 | 5.937540 | ACATACATTCGTCCAACATTCTTCA | 59.062 | 36.000 | 0.00 | 0.00 | 0.00 | 3.02 |
727 | 764 | 8.868522 | TCTTGTTGAACTATTTTCATCATCCT | 57.131 | 30.769 | 0.00 | 0.00 | 30.89 | 3.24 |
796 | 833 | 9.673454 | GTACTAAACTTGGAACACTTATTTTGG | 57.327 | 33.333 | 0.00 | 0.00 | 39.29 | 3.28 |
825 | 862 | 7.309012 | CGAAGGGAGTATAAGATAAATCACCGA | 60.309 | 40.741 | 0.00 | 0.00 | 0.00 | 4.69 |
890 | 927 | 9.214957 | CATGAGTAGGTAAATCACAAACTAACA | 57.785 | 33.333 | 0.00 | 0.00 | 0.00 | 2.41 |
929 | 971 | 4.522114 | TCGGTTGGAATGCAATTATCTCA | 58.478 | 39.130 | 0.00 | 0.00 | 36.07 | 3.27 |
970 | 1197 | 0.180406 | TAAAGCCAAGGGATCTCGGC | 59.820 | 55.000 | 3.40 | 3.40 | 45.23 | 5.54 |
1131 | 1365 | 1.153369 | CGGGAGCATCATCACCGTT | 60.153 | 57.895 | 0.00 | 0.00 | 39.70 | 4.44 |
1167 | 1401 | 2.203070 | GGCGTCCGAGGCATCATT | 60.203 | 61.111 | 14.64 | 0.00 | 36.61 | 2.57 |
1170 | 1404 | 1.143838 | CGTCCGAGGCATCATTCCA | 59.856 | 57.895 | 0.00 | 0.00 | 0.00 | 3.53 |
1211 | 1445 | 2.755655 | TCGAAGAGAAGCTCCAGGTTAG | 59.244 | 50.000 | 0.00 | 0.00 | 35.69 | 2.34 |
1272 | 2647 | 2.879907 | GCACTTGCACGCATCCAT | 59.120 | 55.556 | 0.00 | 0.00 | 41.59 | 3.41 |
1274 | 2649 | 1.061411 | CACTTGCACGCATCCATCG | 59.939 | 57.895 | 0.00 | 0.00 | 0.00 | 3.84 |
1306 | 2698 | 0.251297 | TGATGAGCAGTTGTTGGGGG | 60.251 | 55.000 | 0.00 | 0.00 | 0.00 | 5.40 |
1310 | 2702 | 2.521708 | GCAGTTGTTGGGGGTGCT | 60.522 | 61.111 | 0.00 | 0.00 | 0.00 | 4.40 |
1534 | 2935 | 4.508492 | TGCATACTTTTAAATAGCGCGCTA | 59.492 | 37.500 | 39.72 | 39.72 | 0.00 | 4.26 |
1574 | 2975 | 2.735100 | GCTCGCGGTGCTATAGCC | 60.735 | 66.667 | 21.84 | 12.70 | 41.18 | 3.93 |
1582 | 2983 | 1.412710 | CGGTGCTATAGCCTTTGGAGA | 59.587 | 52.381 | 21.84 | 0.00 | 41.18 | 3.71 |
1617 | 3018 | 9.076596 | GCTAATCCATTTAACTTCATTTCACAC | 57.923 | 33.333 | 0.00 | 0.00 | 0.00 | 3.82 |
1645 | 3046 | 7.827819 | TTGTCATGCTATAGTGTCAACTTAC | 57.172 | 36.000 | 0.84 | 0.00 | 37.88 | 2.34 |
1651 | 3052 | 0.599558 | TAGTGTCAACTTACCGCGCT | 59.400 | 50.000 | 5.56 | 0.00 | 37.88 | 5.92 |
1652 | 3053 | 0.599558 | AGTGTCAACTTACCGCGCTA | 59.400 | 50.000 | 5.56 | 0.00 | 30.14 | 4.26 |
1654 | 3055 | 1.997606 | GTGTCAACTTACCGCGCTAAT | 59.002 | 47.619 | 5.56 | 0.00 | 0.00 | 1.73 |
1655 | 3056 | 1.996898 | TGTCAACTTACCGCGCTAATG | 59.003 | 47.619 | 5.56 | 0.00 | 0.00 | 1.90 |
1657 | 3058 | 1.006832 | CAACTTACCGCGCTAATGCT | 58.993 | 50.000 | 5.56 | 0.00 | 36.97 | 3.79 |
1658 | 3059 | 1.396996 | CAACTTACCGCGCTAATGCTT | 59.603 | 47.619 | 5.56 | 0.00 | 36.97 | 3.91 |
1684 | 3085 | 4.621886 | GTCGCTATTCGCCCTTCTATTTAG | 59.378 | 45.833 | 0.00 | 0.00 | 38.27 | 1.85 |
1721 | 3122 | 6.510879 | ACTCTGTGAACACATATAAGACGA | 57.489 | 37.500 | 8.09 | 0.00 | 41.01 | 4.20 |
1753 | 3154 | 4.836175 | TGTTTACAGAGGGAGTACATGACA | 59.164 | 41.667 | 0.00 | 0.00 | 0.00 | 3.58 |
1754 | 3155 | 5.047306 | TGTTTACAGAGGGAGTACATGACAG | 60.047 | 44.000 | 0.00 | 0.00 | 0.00 | 3.51 |
1757 | 3158 | 0.103208 | GAGGGAGTACATGACAGGCG | 59.897 | 60.000 | 0.00 | 0.00 | 0.00 | 5.52 |
1778 | 3632 | 1.073216 | CCTCGTGCAACTACGCTCAG | 61.073 | 60.000 | 0.00 | 0.00 | 43.40 | 3.35 |
1811 | 3669 | 8.430801 | ACTCATGAGCTATTTACAATCTGTTC | 57.569 | 34.615 | 22.83 | 0.00 | 0.00 | 3.18 |
1821 | 3679 | 3.360249 | ACAATCTGTTCTGCAGCAAAC | 57.640 | 42.857 | 9.47 | 10.13 | 44.66 | 2.93 |
1875 | 3733 | 0.884704 | CAAGTACAACGGCCAGCACT | 60.885 | 55.000 | 2.24 | 0.00 | 0.00 | 4.40 |
2047 | 3920 | 5.981315 | CCATAGTGGCATGTCATTCAAATTC | 59.019 | 40.000 | 1.89 | 0.00 | 0.00 | 2.17 |
2190 | 4162 | 4.231718 | TGAAACGAAATTTGTACAGGCC | 57.768 | 40.909 | 0.00 | 0.00 | 0.00 | 5.19 |
2191 | 4163 | 3.632604 | TGAAACGAAATTTGTACAGGCCA | 59.367 | 39.130 | 5.01 | 0.00 | 0.00 | 5.36 |
2192 | 4164 | 4.279671 | TGAAACGAAATTTGTACAGGCCAT | 59.720 | 37.500 | 5.01 | 0.00 | 0.00 | 4.40 |
2202 | 4174 | 2.289631 | TGTACAGGCCATGAGTGTGAAG | 60.290 | 50.000 | 5.01 | 0.00 | 0.00 | 3.02 |
2223 | 4195 | 0.744414 | TTGAGGCTGAAGCGTATGCC | 60.744 | 55.000 | 2.51 | 7.17 | 44.31 | 4.40 |
2263 | 4235 | 6.142480 | CGCACGTGTTATATAGAGGAAAAGAG | 59.858 | 42.308 | 18.38 | 0.00 | 0.00 | 2.85 |
2264 | 4236 | 7.201145 | GCACGTGTTATATAGAGGAAAAGAGA | 58.799 | 38.462 | 18.38 | 0.00 | 0.00 | 3.10 |
2265 | 4237 | 7.868415 | GCACGTGTTATATAGAGGAAAAGAGAT | 59.132 | 37.037 | 18.38 | 0.00 | 0.00 | 2.75 |
2279 | 4252 | 2.892784 | AGAGATTACAAGCGGTAGGC | 57.107 | 50.000 | 0.00 | 0.00 | 44.05 | 3.93 |
2334 | 4317 | 4.421365 | GGCAATCTCAACAGCCCA | 57.579 | 55.556 | 0.00 | 0.00 | 41.25 | 5.36 |
2345 | 4329 | 0.252197 | AACAGCCCAACCGATCCTAC | 59.748 | 55.000 | 0.00 | 0.00 | 0.00 | 3.18 |
2366 | 4369 | 3.194116 | ACCTTCGGATATACACAACACGT | 59.806 | 43.478 | 0.00 | 0.00 | 0.00 | 4.49 |
2375 | 4388 | 2.206815 | ACACAACACGTACGCTACAA | 57.793 | 45.000 | 16.72 | 0.00 | 0.00 | 2.41 |
2532 | 4548 | 1.542547 | CCTGTAGGCACAAACCGAACT | 60.543 | 52.381 | 0.00 | 0.00 | 33.22 | 3.01 |
2676 | 4692 | 2.420890 | GCAGCTCGAGGATGAGGG | 59.579 | 66.667 | 15.58 | 0.00 | 36.47 | 4.30 |
2718 | 4734 | 3.806949 | TTCTGCACCCAAATTACCTCT | 57.193 | 42.857 | 0.00 | 0.00 | 0.00 | 3.69 |
2742 | 4758 | 6.741116 | GCAGTGGCATTAGCTAAGGCTTTG | 62.741 | 50.000 | 34.16 | 28.40 | 42.71 | 2.77 |
2900 | 4917 | 5.067674 | TCAGAAAAAGCACTAACAAGCATGT | 59.932 | 36.000 | 0.00 | 0.00 | 43.14 | 3.21 |
3004 | 5021 | 7.665559 | TGAACAGAAGTAGGAGCATGTAAAAAT | 59.334 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
3105 | 5122 | 5.747483 | TACCGAGTGGAGTCATCTGACGT | 62.747 | 52.174 | 4.76 | 0.00 | 43.63 | 4.34 |
3152 | 5169 | 2.818921 | ACTTCTCAGTGAGAGCCAGAT | 58.181 | 47.619 | 21.64 | 6.34 | 44.35 | 2.90 |
3196 | 5213 | 0.749091 | TCATCCCAATGCGCTGAAGG | 60.749 | 55.000 | 9.73 | 4.73 | 32.58 | 3.46 |
3269 | 5288 | 5.177511 | GGCTTAACTTCAATGCCAAGAAAAC | 59.822 | 40.000 | 0.00 | 0.00 | 42.79 | 2.43 |
3270 | 5289 | 5.107875 | GCTTAACTTCAATGCCAAGAAAACG | 60.108 | 40.000 | 0.00 | 0.00 | 0.00 | 3.60 |
3372 | 5393 | 9.277783 | GGAGCTAGTAACAACAATATCATCAAT | 57.722 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
3418 | 5439 | 2.868044 | GCCATGCCGACGATAGAAGAAT | 60.868 | 50.000 | 0.00 | 0.00 | 41.38 | 2.40 |
3449 | 5470 | 2.978278 | TCCCCTTTGGATGCAACAAAAT | 59.022 | 40.909 | 17.23 | 0.00 | 38.61 | 1.82 |
3454 | 5475 | 4.453136 | CCTTTGGATGCAACAAAATCAAGG | 59.547 | 41.667 | 17.23 | 12.18 | 37.37 | 3.61 |
3476 | 5497 | 5.044846 | AGGGACTGCAACTTGGAATATAACT | 60.045 | 40.000 | 0.00 | 0.00 | 37.18 | 2.24 |
3550 | 5571 | 4.221262 | AGCTTGCAAACATAATGTGGTGAT | 59.779 | 37.500 | 0.00 | 0.00 | 0.00 | 3.06 |
3790 | 5811 | 0.321210 | TGTACCTGTCAATGGTGCCG | 60.321 | 55.000 | 0.00 | 0.00 | 39.04 | 5.69 |
3842 | 5863 | 5.648178 | TTTGCAGTCAATGACATTGCTAT | 57.352 | 34.783 | 22.34 | 8.21 | 40.05 | 2.97 |
4079 | 6101 | 2.816958 | CGCAGGTTGATCAGCGCT | 60.817 | 61.111 | 2.64 | 2.64 | 43.80 | 5.92 |
4251 | 6273 | 4.785453 | GGGCTGGTTGCGGGAGAG | 62.785 | 72.222 | 0.00 | 0.00 | 44.05 | 3.20 |
4281 | 6314 | 2.188994 | GAAGCATCCGAGGCAGCT | 59.811 | 61.111 | 7.91 | 2.98 | 39.37 | 4.24 |
4543 | 6651 | 0.765510 | GATACTCCCCGCCCAAATCT | 59.234 | 55.000 | 0.00 | 0.00 | 0.00 | 2.40 |
4544 | 6652 | 1.143073 | GATACTCCCCGCCCAAATCTT | 59.857 | 52.381 | 0.00 | 0.00 | 0.00 | 2.40 |
4585 | 6693 | 3.157252 | TCTGCGGCAGGAGATCCC | 61.157 | 66.667 | 28.18 | 0.00 | 40.01 | 3.85 |
5161 | 7280 | 1.056660 | GGGAGAGACCAACTTCCACA | 58.943 | 55.000 | 0.00 | 0.00 | 41.20 | 4.17 |
5233 | 7352 | 4.141711 | GGGCAAGAGACATGGTGAGTAATA | 60.142 | 45.833 | 0.00 | 0.00 | 0.00 | 0.98 |
5235 | 7354 | 5.419542 | GCAAGAGACATGGTGAGTAATACA | 58.580 | 41.667 | 0.00 | 0.00 | 0.00 | 2.29 |
5236 | 7355 | 6.051717 | GCAAGAGACATGGTGAGTAATACAT | 58.948 | 40.000 | 0.00 | 0.00 | 0.00 | 2.29 |
5588 | 7712 | 9.480053 | CAAAAGATGGTCTTGTTTATTTGACAT | 57.520 | 29.630 | 0.00 | 0.00 | 36.71 | 3.06 |
5855 | 8002 | 9.466497 | TTTCATAAGTTGATAAGCAGAAAGGAT | 57.534 | 29.630 | 0.00 | 0.00 | 33.34 | 3.24 |
6464 | 8687 | 0.456312 | GAGTGATTCGGCGAGAACGT | 60.456 | 55.000 | 10.46 | 0.00 | 42.39 | 3.99 |
6885 | 9114 | 2.831685 | ACGTAAGCACCTGTTGATCA | 57.168 | 45.000 | 0.00 | 0.00 | 45.62 | 2.92 |
7196 | 9438 | 4.406648 | TGGCTCTGTATACCATGTGAAG | 57.593 | 45.455 | 0.00 | 0.00 | 0.00 | 3.02 |
7217 | 9461 | 0.744414 | TTGAGGCTGAAGCGTATGCC | 60.744 | 55.000 | 2.51 | 7.17 | 44.31 | 4.40 |
7257 | 9503 | 7.323177 | GCGTACGTGTTATATAGAGGAAAAGAG | 59.677 | 40.741 | 17.90 | 0.00 | 0.00 | 2.85 |
7258 | 9504 | 8.554528 | CGTACGTGTTATATAGAGGAAAAGAGA | 58.445 | 37.037 | 7.22 | 0.00 | 0.00 | 3.10 |
7273 | 9523 | 2.892784 | AGAGATTACAAGCGGTAGGC | 57.107 | 50.000 | 0.00 | 0.00 | 44.05 | 3.93 |
7300 | 9550 | 3.266772 | AGGGCTGTGGATTGATCTACAAA | 59.733 | 43.478 | 10.71 | 0.00 | 45.61 | 2.83 |
7328 | 9585 | 4.421365 | GGCAATCTCAACAGCCCA | 57.579 | 55.556 | 0.00 | 0.00 | 41.25 | 5.36 |
7360 | 9628 | 1.999735 | CTTCGGATATGCACAACACGT | 59.000 | 47.619 | 0.00 | 0.00 | 0.00 | 4.49 |
7369 | 9652 | 0.854062 | GCACAACACGTACGCTACAA | 59.146 | 50.000 | 16.72 | 0.00 | 0.00 | 2.41 |
7388 | 9676 | 4.714851 | ACAAACGGTTTATACAACATCGC | 58.285 | 39.130 | 5.69 | 0.00 | 0.00 | 4.58 |
7416 | 9704 | 4.839121 | ACAACGCTTAACAATGAGGGATA | 58.161 | 39.130 | 0.00 | 0.00 | 0.00 | 2.59 |
7479 | 9767 | 4.233635 | CCGCGTCGACCTACCTCG | 62.234 | 72.222 | 10.58 | 4.23 | 34.83 | 4.63 |
7554 | 9844 | 3.774959 | ATCGATGGAGGCGTCGTGC | 62.775 | 63.158 | 0.00 | 0.00 | 45.38 | 5.34 |
7582 | 9876 | 0.456312 | CCGGTAACTCGTGAGCACTC | 60.456 | 60.000 | 0.00 | 0.00 | 0.00 | 3.51 |
7623 | 11208 | 5.893255 | TGATGGGAGCTTGCTAACATAATTT | 59.107 | 36.000 | 10.19 | 0.00 | 0.00 | 1.82 |
7652 | 11237 | 8.747538 | TCTGTACTAGCTAACTTATGTGATGA | 57.252 | 34.615 | 0.00 | 0.00 | 0.00 | 2.92 |
7678 | 11263 | 8.245195 | TGATGTGTGCCTCACTAACTTATATA | 57.755 | 34.615 | 9.82 | 0.00 | 46.27 | 0.86 |
7765 | 11350 | 1.374947 | CTTCTTCCCCGTCAAGCCA | 59.625 | 57.895 | 0.00 | 0.00 | 0.00 | 4.75 |
7766 | 11351 | 0.250727 | CTTCTTCCCCGTCAAGCCAA | 60.251 | 55.000 | 0.00 | 0.00 | 0.00 | 4.52 |
7798 | 11383 | 3.623060 | GCAAGTTCATGATCCTTTCGCTA | 59.377 | 43.478 | 0.00 | 0.00 | 0.00 | 4.26 |
7891 | 11476 | 0.472925 | TCTACAAGAGGGGTGCCACA | 60.473 | 55.000 | 0.00 | 0.00 | 0.00 | 4.17 |
7949 | 11534 | 1.003003 | TCGTTGACATCCAAGCATCCA | 59.997 | 47.619 | 0.00 | 0.00 | 35.03 | 3.41 |
7951 | 11536 | 2.424601 | CGTTGACATCCAAGCATCCATT | 59.575 | 45.455 | 0.00 | 0.00 | 35.03 | 3.16 |
7952 | 11537 | 3.732774 | CGTTGACATCCAAGCATCCATTG | 60.733 | 47.826 | 0.00 | 0.00 | 35.03 | 2.82 |
8101 | 11692 | 3.467803 | GTTGCTAAAGAGACAGGTGTGT | 58.532 | 45.455 | 0.00 | 0.00 | 40.71 | 3.72 |
8124 | 11715 | 0.532573 | ATGAACGTCGAGACAGGCAT | 59.467 | 50.000 | 0.00 | 0.90 | 0.00 | 4.40 |
8366 | 11970 | 5.744666 | TTAACTCGACAAAAAGAAGGTGG | 57.255 | 39.130 | 0.00 | 0.00 | 0.00 | 4.61 |
8367 | 11971 | 3.553828 | ACTCGACAAAAAGAAGGTGGA | 57.446 | 42.857 | 0.00 | 0.00 | 0.00 | 4.02 |
8368 | 11972 | 3.881220 | ACTCGACAAAAAGAAGGTGGAA | 58.119 | 40.909 | 0.00 | 0.00 | 0.00 | 3.53 |
8369 | 11973 | 4.461198 | ACTCGACAAAAAGAAGGTGGAAT | 58.539 | 39.130 | 0.00 | 0.00 | 0.00 | 3.01 |
8370 | 11974 | 4.887655 | ACTCGACAAAAAGAAGGTGGAATT | 59.112 | 37.500 | 0.00 | 0.00 | 0.00 | 2.17 |
8371 | 11975 | 6.059484 | ACTCGACAAAAAGAAGGTGGAATTA | 58.941 | 36.000 | 0.00 | 0.00 | 0.00 | 1.40 |
8372 | 11976 | 6.715264 | ACTCGACAAAAAGAAGGTGGAATTAT | 59.285 | 34.615 | 0.00 | 0.00 | 0.00 | 1.28 |
8373 | 11977 | 7.230712 | ACTCGACAAAAAGAAGGTGGAATTATT | 59.769 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
8374 | 11978 | 7.947282 | TCGACAAAAAGAAGGTGGAATTATTT | 58.053 | 30.769 | 0.00 | 0.00 | 0.00 | 1.40 |
8375 | 11979 | 8.417884 | TCGACAAAAAGAAGGTGGAATTATTTT | 58.582 | 29.630 | 0.00 | 0.00 | 33.72 | 1.82 |
8376 | 11980 | 9.040939 | CGACAAAAAGAAGGTGGAATTATTTTT | 57.959 | 29.630 | 0.00 | 0.00 | 40.03 | 1.94 |
8395 | 11999 | 3.825908 | TTTTAGGGAAAGGGCAGATGT | 57.174 | 42.857 | 0.00 | 0.00 | 0.00 | 3.06 |
8396 | 12000 | 4.938575 | TTTTAGGGAAAGGGCAGATGTA | 57.061 | 40.909 | 0.00 | 0.00 | 0.00 | 2.29 |
8397 | 12001 | 3.926058 | TTAGGGAAAGGGCAGATGTAC | 57.074 | 47.619 | 0.00 | 0.00 | 0.00 | 2.90 |
8398 | 12002 | 1.972588 | AGGGAAAGGGCAGATGTACT | 58.027 | 50.000 | 0.00 | 0.00 | 0.00 | 2.73 |
8417 | 12021 | 2.219080 | TGCCAATGCATTTCAGAGGA | 57.781 | 45.000 | 9.83 | 0.00 | 44.23 | 3.71 |
8418 | 12022 | 2.097036 | TGCCAATGCATTTCAGAGGAG | 58.903 | 47.619 | 9.83 | 0.00 | 44.23 | 3.69 |
8419 | 12023 | 2.291089 | TGCCAATGCATTTCAGAGGAGA | 60.291 | 45.455 | 9.83 | 0.00 | 44.23 | 3.71 |
8420 | 12024 | 2.358267 | GCCAATGCATTTCAGAGGAGAG | 59.642 | 50.000 | 9.83 | 0.00 | 37.47 | 3.20 |
8421 | 12025 | 2.950309 | CCAATGCATTTCAGAGGAGAGG | 59.050 | 50.000 | 9.83 | 0.00 | 0.00 | 3.69 |
8422 | 12026 | 2.345124 | ATGCATTTCAGAGGAGAGGC | 57.655 | 50.000 | 0.00 | 0.00 | 35.70 | 4.70 |
8423 | 12027 | 0.986527 | TGCATTTCAGAGGAGAGGCA | 59.013 | 50.000 | 0.00 | 0.00 | 41.78 | 4.75 |
8424 | 12028 | 1.065636 | TGCATTTCAGAGGAGAGGCAG | 60.066 | 52.381 | 0.00 | 0.00 | 39.58 | 4.85 |
8425 | 12029 | 1.209019 | GCATTTCAGAGGAGAGGCAGA | 59.791 | 52.381 | 0.00 | 0.00 | 35.29 | 4.26 |
8426 | 12030 | 2.355513 | GCATTTCAGAGGAGAGGCAGAA | 60.356 | 50.000 | 0.00 | 0.00 | 35.29 | 3.02 |
8427 | 12031 | 3.871463 | GCATTTCAGAGGAGAGGCAGAAA | 60.871 | 47.826 | 0.00 | 0.00 | 35.29 | 2.52 |
8428 | 12032 | 4.330250 | CATTTCAGAGGAGAGGCAGAAAA | 58.670 | 43.478 | 0.00 | 0.00 | 0.00 | 2.29 |
8429 | 12033 | 4.437682 | TTTCAGAGGAGAGGCAGAAAAA | 57.562 | 40.909 | 0.00 | 0.00 | 0.00 | 1.94 |
8430 | 12034 | 3.692257 | TCAGAGGAGAGGCAGAAAAAG | 57.308 | 47.619 | 0.00 | 0.00 | 0.00 | 2.27 |
8431 | 12035 | 2.975489 | TCAGAGGAGAGGCAGAAAAAGT | 59.025 | 45.455 | 0.00 | 0.00 | 0.00 | 2.66 |
8432 | 12036 | 3.072944 | CAGAGGAGAGGCAGAAAAAGTG | 58.927 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
8433 | 12037 | 2.708325 | AGAGGAGAGGCAGAAAAAGTGT | 59.292 | 45.455 | 0.00 | 0.00 | 0.00 | 3.55 |
8434 | 12038 | 3.070748 | GAGGAGAGGCAGAAAAAGTGTC | 58.929 | 50.000 | 0.00 | 0.00 | 0.00 | 3.67 |
8435 | 12039 | 2.439507 | AGGAGAGGCAGAAAAAGTGTCA | 59.560 | 45.455 | 0.00 | 0.00 | 0.00 | 3.58 |
8436 | 12040 | 2.810852 | GGAGAGGCAGAAAAAGTGTCAG | 59.189 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
8437 | 12041 | 3.471680 | GAGAGGCAGAAAAAGTGTCAGT | 58.528 | 45.455 | 0.00 | 0.00 | 0.00 | 3.41 |
8438 | 12042 | 3.879892 | GAGAGGCAGAAAAAGTGTCAGTT | 59.120 | 43.478 | 0.00 | 0.00 | 0.00 | 3.16 |
8439 | 12043 | 5.036117 | AGAGGCAGAAAAAGTGTCAGTTA | 57.964 | 39.130 | 0.00 | 0.00 | 0.00 | 2.24 |
8440 | 12044 | 4.816925 | AGAGGCAGAAAAAGTGTCAGTTAC | 59.183 | 41.667 | 0.00 | 0.00 | 0.00 | 2.50 |
8441 | 12045 | 4.523083 | AGGCAGAAAAAGTGTCAGTTACA | 58.477 | 39.130 | 0.00 | 0.00 | 35.06 | 2.41 |
8442 | 12046 | 4.576463 | AGGCAGAAAAAGTGTCAGTTACAG | 59.424 | 41.667 | 0.00 | 0.00 | 39.29 | 2.74 |
8443 | 12047 | 4.261197 | GGCAGAAAAAGTGTCAGTTACAGG | 60.261 | 45.833 | 0.00 | 0.00 | 39.29 | 4.00 |
8444 | 12048 | 4.335594 | GCAGAAAAAGTGTCAGTTACAGGT | 59.664 | 41.667 | 0.00 | 0.00 | 39.29 | 4.00 |
8445 | 12049 | 5.163652 | GCAGAAAAAGTGTCAGTTACAGGTT | 60.164 | 40.000 | 0.00 | 0.00 | 39.29 | 3.50 |
8446 | 12050 | 6.037830 | GCAGAAAAAGTGTCAGTTACAGGTTA | 59.962 | 38.462 | 0.00 | 0.00 | 39.29 | 2.85 |
8447 | 12051 | 7.407337 | CAGAAAAAGTGTCAGTTACAGGTTAC | 58.593 | 38.462 | 0.00 | 0.00 | 39.29 | 2.50 |
8448 | 12052 | 7.065324 | CAGAAAAAGTGTCAGTTACAGGTTACA | 59.935 | 37.037 | 0.00 | 0.00 | 39.29 | 2.41 |
8449 | 12053 | 7.608761 | AGAAAAAGTGTCAGTTACAGGTTACAA | 59.391 | 33.333 | 0.00 | 0.00 | 39.29 | 2.41 |
8450 | 12054 | 7.690952 | AAAAGTGTCAGTTACAGGTTACAAA | 57.309 | 32.000 | 0.00 | 0.00 | 39.29 | 2.83 |
8451 | 12055 | 6.920569 | AAGTGTCAGTTACAGGTTACAAAG | 57.079 | 37.500 | 0.00 | 0.00 | 39.29 | 2.77 |
8452 | 12056 | 4.814771 | AGTGTCAGTTACAGGTTACAAAGC | 59.185 | 41.667 | 0.00 | 0.00 | 39.29 | 3.51 |
8453 | 12057 | 3.805422 | TGTCAGTTACAGGTTACAAAGCG | 59.195 | 43.478 | 0.00 | 0.00 | 33.01 | 4.68 |
8454 | 12058 | 3.805971 | GTCAGTTACAGGTTACAAAGCGT | 59.194 | 43.478 | 0.00 | 0.00 | 0.00 | 5.07 |
8455 | 12059 | 3.805422 | TCAGTTACAGGTTACAAAGCGTG | 59.195 | 43.478 | 0.00 | 0.00 | 0.00 | 5.34 |
8456 | 12060 | 3.558418 | CAGTTACAGGTTACAAAGCGTGT | 59.442 | 43.478 | 1.61 | 1.61 | 44.82 | 4.49 |
8457 | 12061 | 4.746115 | CAGTTACAGGTTACAAAGCGTGTA | 59.254 | 41.667 | 0.00 | 0.00 | 41.98 | 2.90 |
8464 | 12068 | 2.012937 | TACAAAGCGTGTAATCGGGG | 57.987 | 50.000 | 1.27 | 0.00 | 39.85 | 5.73 |
8465 | 12069 | 0.035739 | ACAAAGCGTGTAATCGGGGT | 59.964 | 50.000 | 0.00 | 0.00 | 39.29 | 4.95 |
8466 | 12070 | 1.161843 | CAAAGCGTGTAATCGGGGTT | 58.838 | 50.000 | 0.00 | 0.00 | 0.00 | 4.11 |
8467 | 12071 | 1.129811 | CAAAGCGTGTAATCGGGGTTC | 59.870 | 52.381 | 0.00 | 0.00 | 0.00 | 3.62 |
8468 | 12072 | 0.392060 | AAGCGTGTAATCGGGGTTCC | 60.392 | 55.000 | 0.00 | 0.00 | 0.00 | 3.62 |
8469 | 12073 | 1.816679 | GCGTGTAATCGGGGTTCCC | 60.817 | 63.158 | 0.00 | 0.00 | 41.09 | 3.97 |
8487 | 12091 | 2.818274 | GACGCCCGCGAAGGAAAT | 60.818 | 61.111 | 17.16 | 0.00 | 45.00 | 2.17 |
8488 | 12092 | 1.519898 | GACGCCCGCGAAGGAAATA | 60.520 | 57.895 | 17.16 | 0.00 | 45.00 | 1.40 |
8489 | 12093 | 1.078988 | ACGCCCGCGAAGGAAATAA | 60.079 | 52.632 | 17.16 | 0.00 | 45.00 | 1.40 |
8490 | 12094 | 0.674269 | ACGCCCGCGAAGGAAATAAA | 60.674 | 50.000 | 17.16 | 0.00 | 45.00 | 1.40 |
8491 | 12095 | 0.448593 | CGCCCGCGAAGGAAATAAAA | 59.551 | 50.000 | 8.23 | 0.00 | 45.00 | 1.52 |
8492 | 12096 | 1.064952 | CGCCCGCGAAGGAAATAAAAT | 59.935 | 47.619 | 8.23 | 0.00 | 45.00 | 1.82 |
8493 | 12097 | 2.459934 | GCCCGCGAAGGAAATAAAATG | 58.540 | 47.619 | 8.23 | 0.00 | 45.00 | 2.32 |
8494 | 12098 | 2.798145 | GCCCGCGAAGGAAATAAAATGG | 60.798 | 50.000 | 8.23 | 0.00 | 45.00 | 3.16 |
8495 | 12099 | 2.425668 | CCCGCGAAGGAAATAAAATGGT | 59.574 | 45.455 | 8.23 | 0.00 | 45.00 | 3.55 |
8496 | 12100 | 3.119280 | CCCGCGAAGGAAATAAAATGGTT | 60.119 | 43.478 | 8.23 | 0.00 | 45.00 | 3.67 |
8508 | 12112 | 9.733556 | GGAAATAAAATGGTTAAAGGTGGAATT | 57.266 | 29.630 | 0.00 | 0.00 | 0.00 | 2.17 |
8518 | 12122 | 8.862085 | TGGTTAAAGGTGGAATTTTACTTAAGG | 58.138 | 33.333 | 7.53 | 0.00 | 0.00 | 2.69 |
8537 | 12141 | 7.816513 | ACTTAAGGAAGTAATACTCGTGGTTTC | 59.183 | 37.037 | 7.53 | 0.00 | 44.36 | 2.78 |
8576 | 12180 | 0.176680 | AGAGCAGTACATGGCGGAAG | 59.823 | 55.000 | 0.00 | 0.00 | 34.54 | 3.46 |
8577 | 12181 | 0.175760 | GAGCAGTACATGGCGGAAGA | 59.824 | 55.000 | 0.00 | 0.00 | 34.54 | 2.87 |
8578 | 12182 | 0.176680 | AGCAGTACATGGCGGAAGAG | 59.823 | 55.000 | 0.00 | 0.00 | 34.54 | 2.85 |
8579 | 12183 | 0.108138 | GCAGTACATGGCGGAAGAGT | 60.108 | 55.000 | 0.00 | 0.00 | 0.00 | 3.24 |
8580 | 12184 | 1.676014 | GCAGTACATGGCGGAAGAGTT | 60.676 | 52.381 | 0.00 | 0.00 | 0.00 | 3.01 |
8581 | 12185 | 2.699954 | CAGTACATGGCGGAAGAGTTT | 58.300 | 47.619 | 0.00 | 0.00 | 0.00 | 2.66 |
8582 | 12186 | 3.074412 | CAGTACATGGCGGAAGAGTTTT | 58.926 | 45.455 | 0.00 | 0.00 | 0.00 | 2.43 |
8583 | 12187 | 3.502211 | CAGTACATGGCGGAAGAGTTTTT | 59.498 | 43.478 | 0.00 | 0.00 | 0.00 | 1.94 |
8584 | 12188 | 3.751698 | AGTACATGGCGGAAGAGTTTTTC | 59.248 | 43.478 | 0.00 | 0.00 | 0.00 | 2.29 |
8585 | 12189 | 2.863809 | ACATGGCGGAAGAGTTTTTCT | 58.136 | 42.857 | 0.00 | 0.00 | 37.93 | 2.52 |
8587 | 12191 | 3.636764 | ACATGGCGGAAGAGTTTTTCTTT | 59.363 | 39.130 | 0.00 | 0.00 | 46.12 | 2.52 |
8588 | 12192 | 4.099419 | ACATGGCGGAAGAGTTTTTCTTTT | 59.901 | 37.500 | 0.00 | 0.00 | 46.12 | 2.27 |
8589 | 12193 | 4.729227 | TGGCGGAAGAGTTTTTCTTTTT | 57.271 | 36.364 | 0.00 | 0.00 | 46.12 | 1.94 |
8590 | 12194 | 4.429108 | TGGCGGAAGAGTTTTTCTTTTTG | 58.571 | 39.130 | 0.00 | 0.00 | 46.12 | 2.44 |
8591 | 12195 | 3.245284 | GGCGGAAGAGTTTTTCTTTTTGC | 59.755 | 43.478 | 0.00 | 0.00 | 46.12 | 3.68 |
8592 | 12196 | 3.862845 | GCGGAAGAGTTTTTCTTTTTGCA | 59.137 | 39.130 | 0.00 | 0.00 | 46.12 | 4.08 |
8593 | 12197 | 4.026558 | GCGGAAGAGTTTTTCTTTTTGCAG | 60.027 | 41.667 | 0.00 | 0.00 | 46.12 | 4.41 |
8594 | 12198 | 4.504097 | CGGAAGAGTTTTTCTTTTTGCAGG | 59.496 | 41.667 | 0.00 | 0.00 | 46.12 | 4.85 |
8595 | 12199 | 5.419542 | GGAAGAGTTTTTCTTTTTGCAGGT | 58.580 | 37.500 | 0.00 | 0.00 | 46.12 | 4.00 |
8596 | 12200 | 5.874810 | GGAAGAGTTTTTCTTTTTGCAGGTT | 59.125 | 36.000 | 0.00 | 0.00 | 46.12 | 3.50 |
8597 | 12201 | 6.183360 | GGAAGAGTTTTTCTTTTTGCAGGTTG | 60.183 | 38.462 | 0.00 | 0.00 | 46.12 | 3.77 |
8598 | 12202 | 5.793817 | AGAGTTTTTCTTTTTGCAGGTTGT | 58.206 | 33.333 | 0.00 | 0.00 | 29.61 | 3.32 |
8599 | 12203 | 6.230472 | AGAGTTTTTCTTTTTGCAGGTTGTT | 58.770 | 32.000 | 0.00 | 0.00 | 29.61 | 2.83 |
8600 | 12204 | 7.382898 | AGAGTTTTTCTTTTTGCAGGTTGTTA | 58.617 | 30.769 | 0.00 | 0.00 | 29.61 | 2.41 |
8601 | 12205 | 7.875554 | AGAGTTTTTCTTTTTGCAGGTTGTTAA | 59.124 | 29.630 | 0.00 | 0.00 | 29.61 | 2.01 |
8602 | 12206 | 7.802738 | AGTTTTTCTTTTTGCAGGTTGTTAAC | 58.197 | 30.769 | 0.00 | 0.00 | 0.00 | 2.01 |
8614 | 12218 | 4.213596 | GGTTGTTAACCCACGTGTTTAG | 57.786 | 45.455 | 15.65 | 2.69 | 46.12 | 1.85 |
8615 | 12219 | 3.876320 | GGTTGTTAACCCACGTGTTTAGA | 59.124 | 43.478 | 15.65 | 0.00 | 46.12 | 2.10 |
8616 | 12220 | 4.516321 | GGTTGTTAACCCACGTGTTTAGAT | 59.484 | 41.667 | 15.65 | 0.00 | 46.12 | 1.98 |
8617 | 12221 | 5.008911 | GGTTGTTAACCCACGTGTTTAGATT | 59.991 | 40.000 | 15.65 | 0.00 | 46.12 | 2.40 |
8618 | 12222 | 5.676532 | TGTTAACCCACGTGTTTAGATTG | 57.323 | 39.130 | 15.65 | 0.00 | 0.00 | 2.67 |
8619 | 12223 | 4.515944 | TGTTAACCCACGTGTTTAGATTGG | 59.484 | 41.667 | 15.65 | 8.21 | 0.00 | 3.16 |
8620 | 12224 | 3.495434 | AACCCACGTGTTTAGATTGGA | 57.505 | 42.857 | 15.65 | 0.00 | 0.00 | 3.53 |
8621 | 12225 | 3.495434 | ACCCACGTGTTTAGATTGGAA | 57.505 | 42.857 | 15.65 | 0.00 | 0.00 | 3.53 |
8622 | 12226 | 3.822940 | ACCCACGTGTTTAGATTGGAAA | 58.177 | 40.909 | 15.65 | 0.00 | 0.00 | 3.13 |
8623 | 12227 | 4.403734 | ACCCACGTGTTTAGATTGGAAAT | 58.596 | 39.130 | 15.65 | 0.00 | 0.00 | 2.17 |
8624 | 12228 | 4.830600 | ACCCACGTGTTTAGATTGGAAATT | 59.169 | 37.500 | 15.65 | 0.00 | 0.00 | 1.82 |
8625 | 12229 | 5.160641 | CCCACGTGTTTAGATTGGAAATTG | 58.839 | 41.667 | 15.65 | 0.00 | 0.00 | 2.32 |
8626 | 12230 | 5.160641 | CCACGTGTTTAGATTGGAAATTGG | 58.839 | 41.667 | 15.65 | 0.00 | 0.00 | 3.16 |
8627 | 12231 | 4.621034 | CACGTGTTTAGATTGGAAATTGGC | 59.379 | 41.667 | 7.58 | 0.00 | 0.00 | 4.52 |
8628 | 12232 | 4.173256 | CGTGTTTAGATTGGAAATTGGCC | 58.827 | 43.478 | 0.00 | 0.00 | 0.00 | 5.36 |
8629 | 12233 | 4.321601 | CGTGTTTAGATTGGAAATTGGCCA | 60.322 | 41.667 | 0.00 | 0.00 | 0.00 | 5.36 |
8630 | 12234 | 4.929211 | GTGTTTAGATTGGAAATTGGCCAC | 59.071 | 41.667 | 3.88 | 0.00 | 34.56 | 5.01 |
8631 | 12235 | 4.590647 | TGTTTAGATTGGAAATTGGCCACA | 59.409 | 37.500 | 3.88 | 0.00 | 34.56 | 4.17 |
8632 | 12236 | 4.799564 | TTAGATTGGAAATTGGCCACAC | 57.200 | 40.909 | 3.88 | 0.00 | 34.56 | 3.82 |
8633 | 12237 | 1.545582 | AGATTGGAAATTGGCCACACG | 59.454 | 47.619 | 3.88 | 0.00 | 34.56 | 4.49 |
8634 | 12238 | 1.272212 | GATTGGAAATTGGCCACACGT | 59.728 | 47.619 | 3.88 | 0.00 | 34.56 | 4.49 |
8635 | 12239 | 0.387202 | TTGGAAATTGGCCACACGTG | 59.613 | 50.000 | 15.48 | 15.48 | 34.56 | 4.49 |
8636 | 12240 | 1.372872 | GGAAATTGGCCACACGTGC | 60.373 | 57.895 | 17.22 | 0.63 | 0.00 | 5.34 |
8637 | 12241 | 1.361993 | GAAATTGGCCACACGTGCA | 59.638 | 52.632 | 17.22 | 1.90 | 0.00 | 4.57 |
8638 | 12242 | 0.939106 | GAAATTGGCCACACGTGCAC | 60.939 | 55.000 | 17.22 | 6.82 | 0.00 | 4.57 |
8639 | 12243 | 1.670949 | AAATTGGCCACACGTGCACA | 61.671 | 50.000 | 17.22 | 6.72 | 0.00 | 4.57 |
8640 | 12244 | 2.348605 | AATTGGCCACACGTGCACAC | 62.349 | 55.000 | 17.22 | 4.64 | 0.00 | 3.82 |
8641 | 12245 | 3.986072 | TTGGCCACACGTGCACACT | 62.986 | 57.895 | 17.22 | 0.00 | 0.00 | 3.55 |
8642 | 12246 | 3.649986 | GGCCACACGTGCACACTC | 61.650 | 66.667 | 17.22 | 0.00 | 0.00 | 3.51 |
8643 | 12247 | 2.588877 | GCCACACGTGCACACTCT | 60.589 | 61.111 | 17.22 | 0.00 | 0.00 | 3.24 |
8644 | 12248 | 1.300620 | GCCACACGTGCACACTCTA | 60.301 | 57.895 | 17.22 | 0.00 | 0.00 | 2.43 |
8645 | 12249 | 0.878523 | GCCACACGTGCACACTCTAA | 60.879 | 55.000 | 17.22 | 0.00 | 0.00 | 2.10 |
8646 | 12250 | 1.795768 | CCACACGTGCACACTCTAAT | 58.204 | 50.000 | 17.22 | 0.00 | 0.00 | 1.73 |
8647 | 12251 | 2.143122 | CCACACGTGCACACTCTAATT | 58.857 | 47.619 | 17.22 | 0.00 | 0.00 | 1.40 |
8648 | 12252 | 3.322369 | CCACACGTGCACACTCTAATTA | 58.678 | 45.455 | 17.22 | 0.00 | 0.00 | 1.40 |
8649 | 12253 | 3.932710 | CCACACGTGCACACTCTAATTAT | 59.067 | 43.478 | 17.22 | 0.00 | 0.00 | 1.28 |
8650 | 12254 | 5.106442 | CCACACGTGCACACTCTAATTATA | 58.894 | 41.667 | 17.22 | 0.00 | 0.00 | 0.98 |
8651 | 12255 | 5.753438 | CCACACGTGCACACTCTAATTATAT | 59.247 | 40.000 | 17.22 | 0.00 | 0.00 | 0.86 |
8652 | 12256 | 6.921307 | CCACACGTGCACACTCTAATTATATA | 59.079 | 38.462 | 17.22 | 0.00 | 0.00 | 0.86 |
8653 | 12257 | 7.598869 | CCACACGTGCACACTCTAATTATATAT | 59.401 | 37.037 | 17.22 | 0.00 | 0.00 | 0.86 |
8654 | 12258 | 8.427774 | CACACGTGCACACTCTAATTATATATG | 58.572 | 37.037 | 17.22 | 0.00 | 0.00 | 1.78 |
8655 | 12259 | 7.116376 | ACACGTGCACACTCTAATTATATATGC | 59.884 | 37.037 | 17.22 | 0.00 | 0.00 | 3.14 |
8656 | 12260 | 7.329471 | CACGTGCACACTCTAATTATATATGCT | 59.671 | 37.037 | 18.64 | 0.00 | 0.00 | 3.79 |
8657 | 12261 | 8.520351 | ACGTGCACACTCTAATTATATATGCTA | 58.480 | 33.333 | 18.64 | 0.00 | 0.00 | 3.49 |
8658 | 12262 | 9.014533 | CGTGCACACTCTAATTATATATGCTAG | 57.985 | 37.037 | 18.64 | 0.00 | 0.00 | 3.42 |
8659 | 12263 | 9.307121 | GTGCACACTCTAATTATATATGCTAGG | 57.693 | 37.037 | 13.17 | 0.00 | 0.00 | 3.02 |
8660 | 12264 | 9.255029 | TGCACACTCTAATTATATATGCTAGGA | 57.745 | 33.333 | 0.00 | 0.00 | 0.00 | 2.94 |
8696 | 12300 | 3.818787 | CCTGCATGGCAAGGTCGC | 61.819 | 66.667 | 0.00 | 0.00 | 38.41 | 5.19 |
8697 | 12301 | 3.057548 | CTGCATGGCAAGGTCGCA | 61.058 | 61.111 | 0.00 | 0.00 | 38.41 | 5.10 |
8698 | 12302 | 3.047718 | CTGCATGGCAAGGTCGCAG | 62.048 | 63.158 | 10.39 | 10.39 | 43.55 | 5.18 |
8699 | 12303 | 3.818787 | GCATGGCAAGGTCGCAGG | 61.819 | 66.667 | 0.00 | 0.00 | 0.00 | 4.85 |
8700 | 12304 | 3.818787 | CATGGCAAGGTCGCAGGC | 61.819 | 66.667 | 0.00 | 0.00 | 0.00 | 4.85 |
8701 | 12305 | 4.349503 | ATGGCAAGGTCGCAGGCA | 62.350 | 61.111 | 0.00 | 0.00 | 42.19 | 4.75 |
8705 | 12309 | 4.680237 | CAAGGTCGCAGGCACGGA | 62.680 | 66.667 | 0.03 | 0.00 | 0.00 | 4.69 |
8706 | 12310 | 3.936203 | AAGGTCGCAGGCACGGAA | 61.936 | 61.111 | 0.03 | 0.00 | 0.00 | 4.30 |
8707 | 12311 | 3.883744 | AAGGTCGCAGGCACGGAAG | 62.884 | 63.158 | 0.03 | 0.00 | 0.00 | 3.46 |
8708 | 12312 | 4.373116 | GGTCGCAGGCACGGAAGA | 62.373 | 66.667 | 0.03 | 0.00 | 0.00 | 2.87 |
8709 | 12313 | 3.112709 | GTCGCAGGCACGGAAGAC | 61.113 | 66.667 | 0.03 | 0.00 | 0.00 | 3.01 |
8720 | 12324 | 2.357034 | GGAAGACGCGGTTGCAGA | 60.357 | 61.111 | 12.47 | 0.00 | 42.97 | 4.26 |
8723 | 12327 | 1.291877 | GAAGACGCGGTTGCAGACAT | 61.292 | 55.000 | 12.47 | 0.00 | 42.97 | 3.06 |
8724 | 12328 | 1.568612 | AAGACGCGGTTGCAGACATG | 61.569 | 55.000 | 12.47 | 0.00 | 42.97 | 3.21 |
8731 | 12335 | 1.303561 | GTTGCAGACATGGGAGGCA | 60.304 | 57.895 | 0.00 | 0.00 | 0.00 | 4.75 |
8732 | 12336 | 0.682209 | GTTGCAGACATGGGAGGCAT | 60.682 | 55.000 | 0.00 | 0.00 | 34.03 | 4.40 |
8741 | 12345 | 3.785859 | GGGAGGCATGGTCGCAGA | 61.786 | 66.667 | 0.00 | 0.00 | 0.00 | 4.26 |
8758 | 12362 | 3.637926 | GACACGGGAGGCACGGTAC | 62.638 | 68.421 | 0.00 | 0.00 | 35.23 | 3.34 |
8789 | 12402 | 2.202311 | CGACGACAGCGATGACGT | 60.202 | 61.111 | 28.98 | 28.98 | 42.07 | 4.34 |
8792 | 12405 | 2.254703 | GACGACAGCGATGACGTCCT | 62.255 | 60.000 | 36.03 | 15.72 | 45.74 | 3.85 |
8845 | 12458 | 1.883638 | GCAACTTGCCACTCCTCATCA | 60.884 | 52.381 | 1.95 | 0.00 | 37.42 | 3.07 |
8848 | 12461 | 1.980765 | ACTTGCCACTCCTCATCAAGA | 59.019 | 47.619 | 7.21 | 0.00 | 37.96 | 3.02 |
8907 | 12520 | 2.558313 | GACTGCAACTTGCTCCGC | 59.442 | 61.111 | 14.78 | 0.00 | 45.31 | 5.54 |
8909 | 12522 | 2.979676 | CTGCAACTTGCTCCGCCA | 60.980 | 61.111 | 14.78 | 0.00 | 45.31 | 5.69 |
8910 | 12523 | 2.518112 | TGCAACTTGCTCCGCCAA | 60.518 | 55.556 | 14.78 | 0.00 | 45.31 | 4.52 |
8917 | 12530 | 2.738213 | CTTGCTCCGCCAAGTCAGGT | 62.738 | 60.000 | 0.00 | 0.00 | 37.89 | 4.00 |
8970 | 12584 | 2.579201 | CGACGGGCTTGATGGACT | 59.421 | 61.111 | 0.00 | 0.00 | 0.00 | 3.85 |
8990 | 12605 | 1.078497 | CCAGCCGACTTGTATGCCA | 60.078 | 57.895 | 0.00 | 0.00 | 0.00 | 4.92 |
8997 | 12612 | 2.159707 | CCGACTTGTATGCCAAAGAACG | 60.160 | 50.000 | 0.00 | 0.00 | 31.20 | 3.95 |
9022 | 12637 | 1.209019 | TCTGGAAGCCATCAGAAGAGC | 59.791 | 52.381 | 0.00 | 0.00 | 37.11 | 4.09 |
9038 | 12653 | 0.103937 | GAGCGGTGAAGGAGGAGATG | 59.896 | 60.000 | 0.00 | 0.00 | 0.00 | 2.90 |
9043 | 12658 | 1.694169 | TGAAGGAGGAGATGGGGGC | 60.694 | 63.158 | 0.00 | 0.00 | 0.00 | 5.80 |
9044 | 12659 | 2.770048 | AAGGAGGAGATGGGGGCG | 60.770 | 66.667 | 0.00 | 0.00 | 0.00 | 6.13 |
9045 | 12660 | 3.332393 | AAGGAGGAGATGGGGGCGA | 62.332 | 63.158 | 0.00 | 0.00 | 0.00 | 5.54 |
9046 | 12661 | 2.527875 | GGAGGAGATGGGGGCGAT | 60.528 | 66.667 | 0.00 | 0.00 | 0.00 | 4.58 |
9101 | 12719 | 1.068127 | GCTTAAATAGAGGGCGGACGA | 59.932 | 52.381 | 0.00 | 0.00 | 0.00 | 4.20 |
9115 | 12733 | 1.752694 | GACGAGAGGAGCTCAGCCT | 60.753 | 63.158 | 17.19 | 3.67 | 44.15 | 4.58 |
9118 | 12736 | 2.284478 | AGAGGAGCTCAGCCTGCA | 60.284 | 61.111 | 17.19 | 0.00 | 35.44 | 4.41 |
9143 | 12761 | 1.312371 | TTTAATGCCAGCCCGCTCAC | 61.312 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
9178 | 12796 | 0.100861 | CGGAGTAGGTTTCTCGGCTC | 59.899 | 60.000 | 0.00 | 0.00 | 33.26 | 4.70 |
9200 | 12818 | 0.604243 | ACGCGTGTTTAATGGAGGCA | 60.604 | 50.000 | 12.93 | 0.00 | 0.00 | 4.75 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
12 | 13 | 9.681062 | AGCACCTTTTATGTTGTATTATACAGT | 57.319 | 29.630 | 5.17 | 0.00 | 40.24 | 3.55 |
37 | 38 | 6.046593 | TGATCTAAATTTGTAGGTGGCGTAG | 58.953 | 40.000 | 0.00 | 0.00 | 0.00 | 3.51 |
38 | 39 | 5.979993 | TGATCTAAATTTGTAGGTGGCGTA | 58.020 | 37.500 | 0.00 | 0.00 | 0.00 | 4.42 |
39 | 40 | 4.839121 | TGATCTAAATTTGTAGGTGGCGT | 58.161 | 39.130 | 0.00 | 0.00 | 0.00 | 5.68 |
40 | 41 | 6.481976 | TGTATGATCTAAATTTGTAGGTGGCG | 59.518 | 38.462 | 0.00 | 0.00 | 0.00 | 5.69 |
41 | 42 | 7.715249 | TCTGTATGATCTAAATTTGTAGGTGGC | 59.285 | 37.037 | 0.00 | 0.00 | 0.00 | 5.01 |
42 | 43 | 9.046296 | GTCTGTATGATCTAAATTTGTAGGTGG | 57.954 | 37.037 | 0.00 | 0.00 | 0.00 | 4.61 |
43 | 44 | 8.755941 | CGTCTGTATGATCTAAATTTGTAGGTG | 58.244 | 37.037 | 0.00 | 0.00 | 0.00 | 4.00 |
44 | 45 | 8.475639 | ACGTCTGTATGATCTAAATTTGTAGGT | 58.524 | 33.333 | 0.00 | 0.00 | 0.00 | 3.08 |
45 | 46 | 8.755941 | CACGTCTGTATGATCTAAATTTGTAGG | 58.244 | 37.037 | 0.00 | 0.00 | 0.00 | 3.18 |
46 | 47 | 9.516314 | TCACGTCTGTATGATCTAAATTTGTAG | 57.484 | 33.333 | 0.00 | 0.00 | 0.00 | 2.74 |
47 | 48 | 9.297586 | GTCACGTCTGTATGATCTAAATTTGTA | 57.702 | 33.333 | 0.00 | 0.00 | 0.00 | 2.41 |
48 | 49 | 7.277981 | GGTCACGTCTGTATGATCTAAATTTGT | 59.722 | 37.037 | 0.00 | 0.00 | 0.00 | 2.83 |
49 | 50 | 7.492669 | AGGTCACGTCTGTATGATCTAAATTTG | 59.507 | 37.037 | 0.00 | 0.00 | 34.45 | 2.32 |
50 | 51 | 7.556844 | AGGTCACGTCTGTATGATCTAAATTT | 58.443 | 34.615 | 0.00 | 0.00 | 34.45 | 1.82 |
51 | 52 | 7.113658 | AGGTCACGTCTGTATGATCTAAATT | 57.886 | 36.000 | 0.00 | 0.00 | 34.45 | 1.82 |
52 | 53 | 6.321435 | TGAGGTCACGTCTGTATGATCTAAAT | 59.679 | 38.462 | 0.00 | 0.00 | 36.41 | 1.40 |
53 | 54 | 5.650703 | TGAGGTCACGTCTGTATGATCTAAA | 59.349 | 40.000 | 0.00 | 0.00 | 36.41 | 1.85 |
54 | 55 | 5.066117 | GTGAGGTCACGTCTGTATGATCTAA | 59.934 | 44.000 | 0.00 | 0.00 | 36.41 | 2.10 |
55 | 56 | 4.575236 | GTGAGGTCACGTCTGTATGATCTA | 59.425 | 45.833 | 0.00 | 0.00 | 36.41 | 1.98 |
56 | 57 | 3.378742 | GTGAGGTCACGTCTGTATGATCT | 59.621 | 47.826 | 0.00 | 0.00 | 39.04 | 2.75 |
57 | 58 | 3.696898 | GTGAGGTCACGTCTGTATGATC | 58.303 | 50.000 | 0.00 | 0.00 | 37.10 | 2.92 |
58 | 59 | 3.784701 | GTGAGGTCACGTCTGTATGAT | 57.215 | 47.619 | 0.00 | 0.00 | 37.10 | 2.45 |
69 | 70 | 4.574599 | AAGCAAAATTCAGTGAGGTCAC | 57.425 | 40.909 | 1.60 | 1.60 | 46.77 | 3.67 |
70 | 71 | 6.707440 | TTAAAGCAAAATTCAGTGAGGTCA | 57.293 | 33.333 | 0.00 | 0.00 | 0.00 | 4.02 |
71 | 72 | 8.419076 | TTTTTAAAGCAAAATTCAGTGAGGTC | 57.581 | 30.769 | 0.00 | 0.00 | 36.04 | 3.85 |
93 | 94 | 6.515035 | CGCCAGAGATAGTTTTGGTTCTTTTT | 60.515 | 38.462 | 0.00 | 0.00 | 33.21 | 1.94 |
94 | 95 | 5.048713 | CGCCAGAGATAGTTTTGGTTCTTTT | 60.049 | 40.000 | 0.00 | 0.00 | 33.21 | 2.27 |
95 | 96 | 4.455877 | CGCCAGAGATAGTTTTGGTTCTTT | 59.544 | 41.667 | 0.00 | 0.00 | 33.21 | 2.52 |
96 | 97 | 4.003648 | CGCCAGAGATAGTTTTGGTTCTT | 58.996 | 43.478 | 0.00 | 0.00 | 33.21 | 2.52 |
97 | 98 | 3.260884 | TCGCCAGAGATAGTTTTGGTTCT | 59.739 | 43.478 | 0.00 | 0.00 | 33.21 | 3.01 |
98 | 99 | 3.596214 | TCGCCAGAGATAGTTTTGGTTC | 58.404 | 45.455 | 0.00 | 0.00 | 33.21 | 3.62 |
99 | 100 | 3.695830 | TCGCCAGAGATAGTTTTGGTT | 57.304 | 42.857 | 0.00 | 0.00 | 33.21 | 3.67 |
100 | 101 | 3.914426 | ATCGCCAGAGATAGTTTTGGT | 57.086 | 42.857 | 0.00 | 0.00 | 33.21 | 3.67 |
101 | 102 | 5.235186 | CAGTAATCGCCAGAGATAGTTTTGG | 59.765 | 44.000 | 0.00 | 0.00 | 0.00 | 3.28 |
102 | 103 | 5.235186 | CCAGTAATCGCCAGAGATAGTTTTG | 59.765 | 44.000 | 0.00 | 0.00 | 0.00 | 2.44 |
103 | 104 | 5.104900 | ACCAGTAATCGCCAGAGATAGTTTT | 60.105 | 40.000 | 0.00 | 0.00 | 0.00 | 2.43 |
104 | 105 | 4.406003 | ACCAGTAATCGCCAGAGATAGTTT | 59.594 | 41.667 | 0.00 | 0.00 | 0.00 | 2.66 |
105 | 106 | 3.961408 | ACCAGTAATCGCCAGAGATAGTT | 59.039 | 43.478 | 0.00 | 0.00 | 0.00 | 2.24 |
106 | 107 | 3.567397 | ACCAGTAATCGCCAGAGATAGT | 58.433 | 45.455 | 0.00 | 0.00 | 0.00 | 2.12 |
107 | 108 | 3.823873 | AGACCAGTAATCGCCAGAGATAG | 59.176 | 47.826 | 0.00 | 0.00 | 0.00 | 2.08 |
108 | 109 | 3.833732 | AGACCAGTAATCGCCAGAGATA | 58.166 | 45.455 | 0.00 | 0.00 | 0.00 | 1.98 |
109 | 110 | 2.672098 | AGACCAGTAATCGCCAGAGAT | 58.328 | 47.619 | 0.00 | 0.00 | 0.00 | 2.75 |
110 | 111 | 2.145397 | AGACCAGTAATCGCCAGAGA | 57.855 | 50.000 | 0.00 | 0.00 | 0.00 | 3.10 |
111 | 112 | 2.287909 | GCTAGACCAGTAATCGCCAGAG | 60.288 | 54.545 | 0.00 | 0.00 | 0.00 | 3.35 |
112 | 113 | 1.681793 | GCTAGACCAGTAATCGCCAGA | 59.318 | 52.381 | 0.00 | 0.00 | 0.00 | 3.86 |
113 | 114 | 1.683917 | AGCTAGACCAGTAATCGCCAG | 59.316 | 52.381 | 0.00 | 0.00 | 0.00 | 4.85 |
114 | 115 | 1.681793 | GAGCTAGACCAGTAATCGCCA | 59.318 | 52.381 | 0.00 | 0.00 | 0.00 | 5.69 |
115 | 116 | 1.957877 | AGAGCTAGACCAGTAATCGCC | 59.042 | 52.381 | 0.00 | 0.00 | 0.00 | 5.54 |
116 | 117 | 3.376540 | CAAGAGCTAGACCAGTAATCGC | 58.623 | 50.000 | 0.00 | 0.00 | 0.00 | 4.58 |
117 | 118 | 3.243569 | CCCAAGAGCTAGACCAGTAATCG | 60.244 | 52.174 | 0.00 | 0.00 | 0.00 | 3.34 |
118 | 119 | 3.070302 | CCCCAAGAGCTAGACCAGTAATC | 59.930 | 52.174 | 0.00 | 0.00 | 0.00 | 1.75 |
119 | 120 | 3.041946 | CCCCAAGAGCTAGACCAGTAAT | 58.958 | 50.000 | 0.00 | 0.00 | 0.00 | 1.89 |
120 | 121 | 2.467880 | CCCCAAGAGCTAGACCAGTAA | 58.532 | 52.381 | 0.00 | 0.00 | 0.00 | 2.24 |
121 | 122 | 1.343075 | CCCCCAAGAGCTAGACCAGTA | 60.343 | 57.143 | 0.00 | 0.00 | 0.00 | 2.74 |
122 | 123 | 0.618968 | CCCCCAAGAGCTAGACCAGT | 60.619 | 60.000 | 0.00 | 0.00 | 0.00 | 4.00 |
123 | 124 | 2.216148 | CCCCCAAGAGCTAGACCAG | 58.784 | 63.158 | 0.00 | 0.00 | 0.00 | 4.00 |
124 | 125 | 4.480480 | CCCCCAAGAGCTAGACCA | 57.520 | 61.111 | 0.00 | 0.00 | 0.00 | 4.02 |
163 | 164 | 1.455786 | GGAATATCGGATGAACGTGCG | 59.544 | 52.381 | 0.00 | 1.75 | 34.94 | 5.34 |
166 | 167 | 3.463944 | GGTTGGAATATCGGATGAACGT | 58.536 | 45.455 | 0.00 | 0.00 | 34.94 | 3.99 |
169 | 170 | 2.489971 | GCGGTTGGAATATCGGATGAA | 58.510 | 47.619 | 0.00 | 0.00 | 0.00 | 2.57 |
212 | 213 | 4.259850 | GCGACACGTTATCTTTTCCTCATC | 60.260 | 45.833 | 0.00 | 0.00 | 0.00 | 2.92 |
257 | 290 | 6.591935 | TCTTCACTCTTTGTGTTTACTCCAT | 58.408 | 36.000 | 0.00 | 0.00 | 46.27 | 3.41 |
275 | 308 | 2.079925 | CCTGCCACTAGCTTTCTTCAC | 58.920 | 52.381 | 0.00 | 0.00 | 44.23 | 3.18 |
293 | 326 | 1.595311 | TTCCATGGCATGTCCTACCT | 58.405 | 50.000 | 24.80 | 0.00 | 35.26 | 3.08 |
299 | 332 | 0.826062 | CCCCTTTTCCATGGCATGTC | 59.174 | 55.000 | 24.80 | 0.00 | 0.00 | 3.06 |
305 | 338 | 2.042979 | TCTTCTTCCCCCTTTTCCATGG | 59.957 | 50.000 | 4.97 | 4.97 | 0.00 | 3.66 |
413 | 447 | 3.798380 | CACCGCTTGCATCATCGA | 58.202 | 55.556 | 0.00 | 0.00 | 0.00 | 3.59 |
435 | 469 | 1.880340 | CTCAAGGAGCGACCGATGC | 60.880 | 63.158 | 0.00 | 0.00 | 44.74 | 3.91 |
440 | 474 | 1.149148 | GTTGAACTCAAGGAGCGACC | 58.851 | 55.000 | 0.00 | 0.00 | 36.39 | 4.79 |
453 | 487 | 5.531287 | ACAAGTGGGTATGAAGAAGTTGAAC | 59.469 | 40.000 | 0.00 | 0.00 | 0.00 | 3.18 |
485 | 522 | 6.895756 | TGGAAAGGTAGTCTCTTCTTATGCTA | 59.104 | 38.462 | 0.00 | 0.00 | 0.00 | 3.49 |
598 | 635 | 8.259049 | TGGACGAATGTATGTTAGGTAAAAAG | 57.741 | 34.615 | 0.00 | 0.00 | 0.00 | 2.27 |
601 | 638 | 7.160049 | TGTTGGACGAATGTATGTTAGGTAAA | 58.840 | 34.615 | 0.00 | 0.00 | 0.00 | 2.01 |
607 | 644 | 7.604545 | TGAAGAATGTTGGACGAATGTATGTTA | 59.395 | 33.333 | 0.00 | 0.00 | 0.00 | 2.41 |
663 | 700 | 9.933723 | AAATTAGAGTGAAATTGATTCCAAAGG | 57.066 | 29.630 | 0.00 | 0.00 | 37.22 | 3.11 |
773 | 810 | 7.865889 | GTCCCAAAATAAGTGTTCCAAGTTTAG | 59.134 | 37.037 | 0.00 | 0.00 | 0.00 | 1.85 |
781 | 818 | 4.082949 | CCTTCGTCCCAAAATAAGTGTTCC | 60.083 | 45.833 | 0.00 | 0.00 | 0.00 | 3.62 |
782 | 819 | 4.082949 | CCCTTCGTCCCAAAATAAGTGTTC | 60.083 | 45.833 | 0.00 | 0.00 | 0.00 | 3.18 |
783 | 820 | 3.824443 | CCCTTCGTCCCAAAATAAGTGTT | 59.176 | 43.478 | 0.00 | 0.00 | 0.00 | 3.32 |
787 | 824 | 3.951663 | ACTCCCTTCGTCCCAAAATAAG | 58.048 | 45.455 | 0.00 | 0.00 | 0.00 | 1.73 |
796 | 833 | 7.813627 | GTGATTTATCTTATACTCCCTTCGTCC | 59.186 | 40.741 | 0.00 | 0.00 | 0.00 | 4.79 |
849 | 886 | 8.383318 | ACCTACTCATGTTAATGTGATTATGC | 57.617 | 34.615 | 0.00 | 0.00 | 35.15 | 3.14 |
895 | 932 | 7.450074 | TGCATTCCAACCGATATAAATAGTCT | 58.550 | 34.615 | 0.00 | 0.00 | 0.00 | 3.24 |
909 | 946 | 5.591877 | AGACTGAGATAATTGCATTCCAACC | 59.408 | 40.000 | 0.00 | 0.00 | 35.99 | 3.77 |
970 | 1197 | 2.758979 | TCTAGCTCCGAACTTGTAAGGG | 59.241 | 50.000 | 0.00 | 0.00 | 0.00 | 3.95 |
1131 | 1365 | 4.193334 | CCGCCGTCGATGCTCAGA | 62.193 | 66.667 | 0.00 | 0.00 | 38.10 | 3.27 |
1161 | 1395 | 1.133575 | AGGATGGTGCCTGGAATGATG | 60.134 | 52.381 | 0.00 | 0.00 | 36.76 | 3.07 |
1167 | 1401 | 3.785859 | GCGAGGATGGTGCCTGGA | 61.786 | 66.667 | 0.00 | 0.00 | 38.73 | 3.86 |
1170 | 1404 | 1.078143 | GAAAGCGAGGATGGTGCCT | 60.078 | 57.895 | 0.00 | 0.00 | 42.17 | 4.75 |
1230 | 2495 | 6.830873 | AGCAGGATGATTGCCTAAATTATC | 57.169 | 37.500 | 0.00 | 0.00 | 42.48 | 1.75 |
1272 | 2647 | 6.015434 | ACTGCTCATCACACCATATATAACGA | 60.015 | 38.462 | 0.00 | 0.00 | 0.00 | 3.85 |
1274 | 2649 | 7.442364 | ACAACTGCTCATCACACCATATATAAC | 59.558 | 37.037 | 0.00 | 0.00 | 0.00 | 1.89 |
1306 | 2698 | 0.670546 | TCAAGCTCCTACGCAAGCAC | 60.671 | 55.000 | 0.00 | 0.00 | 41.06 | 4.40 |
1310 | 2702 | 0.107703 | CCCATCAAGCTCCTACGCAA | 60.108 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
1396 | 2788 | 2.120274 | CTTGGGGTTGGGCATGGT | 59.880 | 61.111 | 0.00 | 0.00 | 0.00 | 3.55 |
1549 | 2950 | 2.445438 | GCACCGCGAGCACTAGTTC | 61.445 | 63.158 | 8.23 | 0.00 | 0.00 | 3.01 |
1598 | 2999 | 9.044150 | ACAAATGGTGTGAAATGAAGTTAAATG | 57.956 | 29.630 | 0.00 | 0.00 | 39.72 | 2.32 |
1604 | 3005 | 5.850557 | TGACAAATGGTGTGAAATGAAGT | 57.149 | 34.783 | 0.00 | 0.00 | 41.96 | 3.01 |
1606 | 3007 | 4.989797 | GCATGACAAATGGTGTGAAATGAA | 59.010 | 37.500 | 0.00 | 0.00 | 41.96 | 2.57 |
1617 | 3018 | 6.317140 | AGTTGACACTATAGCATGACAAATGG | 59.683 | 38.462 | 0.00 | 0.00 | 33.45 | 3.16 |
1651 | 3052 | 2.390938 | CGAATAGCGACCGAAGCATTA | 58.609 | 47.619 | 0.00 | 0.00 | 44.57 | 1.90 |
1652 | 3053 | 1.209128 | CGAATAGCGACCGAAGCATT | 58.791 | 50.000 | 0.00 | 0.00 | 44.57 | 3.56 |
1654 | 3055 | 1.876714 | GCGAATAGCGACCGAAGCA | 60.877 | 57.895 | 0.00 | 0.00 | 44.57 | 3.91 |
1655 | 3056 | 2.921614 | GCGAATAGCGACCGAAGC | 59.078 | 61.111 | 0.00 | 0.00 | 44.57 | 3.86 |
1684 | 3085 | 7.167801 | GTGTTCACAGAGTAGTAGTTCAACTTC | 59.832 | 40.741 | 0.00 | 0.00 | 0.00 | 3.01 |
1738 | 3139 | 0.103208 | CGCCTGTCATGTACTCCCTC | 59.897 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
1754 | 3155 | 4.752879 | TAGTTGCACGAGGCCGCC | 62.753 | 66.667 | 0.00 | 0.00 | 43.89 | 6.13 |
1757 | 3158 | 3.488090 | GCGTAGTTGCACGAGGCC | 61.488 | 66.667 | 0.00 | 0.00 | 44.69 | 5.19 |
1778 | 3632 | 8.703604 | TGTAAATAGCTCATGAGTACTTTCAC | 57.296 | 34.615 | 23.38 | 13.53 | 0.00 | 3.18 |
1811 | 3669 | 1.430632 | CATAGGCCGTTTGCTGCAG | 59.569 | 57.895 | 10.11 | 10.11 | 40.92 | 4.41 |
1875 | 3733 | 1.300620 | CCTTCACGACCGAGTGCAA | 60.301 | 57.895 | 0.00 | 0.00 | 41.61 | 4.08 |
1925 | 3783 | 2.168521 | GGGGATGACGATGTTCTTGAGA | 59.831 | 50.000 | 0.00 | 0.00 | 0.00 | 3.27 |
2047 | 3920 | 8.868635 | AAAAACAATGGCAACCAAAATAATTG | 57.131 | 26.923 | 0.00 | 0.00 | 36.95 | 2.32 |
2090 | 4062 | 3.853727 | CATCGCTTGATGTACACAATCG | 58.146 | 45.455 | 19.23 | 19.23 | 43.70 | 3.34 |
2164 | 4136 | 8.349983 | GGCCTGTACAAATTTCGTTTCATATAT | 58.650 | 33.333 | 0.00 | 0.00 | 0.00 | 0.86 |
2165 | 4137 | 7.337184 | TGGCCTGTACAAATTTCGTTTCATATA | 59.663 | 33.333 | 3.32 | 0.00 | 0.00 | 0.86 |
2166 | 4138 | 6.151985 | TGGCCTGTACAAATTTCGTTTCATAT | 59.848 | 34.615 | 3.32 | 0.00 | 0.00 | 1.78 |
2167 | 4139 | 5.473846 | TGGCCTGTACAAATTTCGTTTCATA | 59.526 | 36.000 | 3.32 | 0.00 | 0.00 | 2.15 |
2168 | 4140 | 4.279671 | TGGCCTGTACAAATTTCGTTTCAT | 59.720 | 37.500 | 3.32 | 0.00 | 0.00 | 2.57 |
2169 | 4141 | 3.632604 | TGGCCTGTACAAATTTCGTTTCA | 59.367 | 39.130 | 3.32 | 0.00 | 0.00 | 2.69 |
2170 | 4142 | 4.231718 | TGGCCTGTACAAATTTCGTTTC | 57.768 | 40.909 | 3.32 | 0.00 | 0.00 | 2.78 |
2171 | 4143 | 4.279671 | TCATGGCCTGTACAAATTTCGTTT | 59.720 | 37.500 | 3.32 | 0.00 | 0.00 | 3.60 |
2172 | 4144 | 3.823873 | TCATGGCCTGTACAAATTTCGTT | 59.176 | 39.130 | 3.32 | 0.00 | 0.00 | 3.85 |
2173 | 4145 | 3.417101 | TCATGGCCTGTACAAATTTCGT | 58.583 | 40.909 | 3.32 | 0.00 | 0.00 | 3.85 |
2174 | 4146 | 3.440173 | ACTCATGGCCTGTACAAATTTCG | 59.560 | 43.478 | 3.32 | 0.00 | 0.00 | 3.46 |
2175 | 4147 | 4.218417 | ACACTCATGGCCTGTACAAATTTC | 59.782 | 41.667 | 3.32 | 0.00 | 0.00 | 2.17 |
2176 | 4148 | 4.022068 | CACACTCATGGCCTGTACAAATTT | 60.022 | 41.667 | 3.32 | 0.00 | 0.00 | 1.82 |
2177 | 4149 | 3.507233 | CACACTCATGGCCTGTACAAATT | 59.493 | 43.478 | 3.32 | 0.00 | 0.00 | 1.82 |
2178 | 4150 | 3.084039 | CACACTCATGGCCTGTACAAAT | 58.916 | 45.455 | 3.32 | 0.00 | 0.00 | 2.32 |
2179 | 4151 | 2.105649 | TCACACTCATGGCCTGTACAAA | 59.894 | 45.455 | 3.32 | 0.00 | 0.00 | 2.83 |
2180 | 4152 | 1.696884 | TCACACTCATGGCCTGTACAA | 59.303 | 47.619 | 3.32 | 0.00 | 0.00 | 2.41 |
2181 | 4153 | 1.347062 | TCACACTCATGGCCTGTACA | 58.653 | 50.000 | 3.32 | 0.00 | 0.00 | 2.90 |
2182 | 4154 | 2.028112 | TCTTCACACTCATGGCCTGTAC | 60.028 | 50.000 | 3.32 | 0.00 | 0.00 | 2.90 |
2183 | 4155 | 2.256306 | TCTTCACACTCATGGCCTGTA | 58.744 | 47.619 | 3.32 | 0.00 | 0.00 | 2.74 |
2184 | 4156 | 1.059098 | TCTTCACACTCATGGCCTGT | 58.941 | 50.000 | 3.32 | 0.00 | 0.00 | 4.00 |
2185 | 4157 | 2.414994 | ATCTTCACACTCATGGCCTG | 57.585 | 50.000 | 3.32 | 0.00 | 0.00 | 4.85 |
2186 | 4158 | 2.306805 | TCAATCTTCACACTCATGGCCT | 59.693 | 45.455 | 3.32 | 0.00 | 0.00 | 5.19 |
2187 | 4159 | 2.681848 | CTCAATCTTCACACTCATGGCC | 59.318 | 50.000 | 0.00 | 0.00 | 0.00 | 5.36 |
2188 | 4160 | 2.681848 | CCTCAATCTTCACACTCATGGC | 59.318 | 50.000 | 0.00 | 0.00 | 0.00 | 4.40 |
2189 | 4161 | 2.681848 | GCCTCAATCTTCACACTCATGG | 59.318 | 50.000 | 0.00 | 0.00 | 0.00 | 3.66 |
2190 | 4162 | 3.374367 | CAGCCTCAATCTTCACACTCATG | 59.626 | 47.826 | 0.00 | 0.00 | 0.00 | 3.07 |
2191 | 4163 | 3.262660 | TCAGCCTCAATCTTCACACTCAT | 59.737 | 43.478 | 0.00 | 0.00 | 0.00 | 2.90 |
2192 | 4164 | 2.634453 | TCAGCCTCAATCTTCACACTCA | 59.366 | 45.455 | 0.00 | 0.00 | 0.00 | 3.41 |
2202 | 4174 | 1.262683 | GCATACGCTTCAGCCTCAATC | 59.737 | 52.381 | 0.00 | 0.00 | 37.91 | 2.67 |
2225 | 4197 | 3.188786 | GTGCGCGTCCCTGCTTAG | 61.189 | 66.667 | 8.43 | 0.00 | 0.00 | 2.18 |
2240 | 4212 | 9.751542 | AATCTCTTTTCCTCTATATAACACGTG | 57.248 | 33.333 | 15.48 | 15.48 | 0.00 | 4.49 |
2263 | 4235 | 0.179092 | ACCGCCTACCGCTTGTAATC | 60.179 | 55.000 | 0.00 | 0.00 | 35.03 | 1.75 |
2264 | 4236 | 0.251073 | AACCGCCTACCGCTTGTAAT | 59.749 | 50.000 | 0.00 | 0.00 | 35.03 | 1.89 |
2265 | 4237 | 0.894141 | TAACCGCCTACCGCTTGTAA | 59.106 | 50.000 | 0.00 | 0.00 | 35.03 | 2.41 |
2272 | 4244 | 3.152400 | AGCCCTAACCGCCTACCG | 61.152 | 66.667 | 0.00 | 0.00 | 0.00 | 4.02 |
2279 | 4252 | 0.251916 | TCAATCCACAGCCCTAACCG | 59.748 | 55.000 | 0.00 | 0.00 | 0.00 | 4.44 |
2352 | 4338 | 5.233957 | TGTAGCGTACGTGTTGTGTATAT | 57.766 | 39.130 | 17.90 | 0.00 | 0.00 | 0.86 |
2366 | 4369 | 5.923114 | TGTTGTATAAACCGTTTGTAGCGTA | 59.077 | 36.000 | 6.77 | 0.00 | 0.00 | 4.42 |
2394 | 4410 | 6.018507 | GGGGTAGTGTTAAGCGTTGTATTATG | 60.019 | 42.308 | 0.00 | 0.00 | 0.00 | 1.90 |
2443 | 4459 | 4.152402 | GCTAGAAGCTTTTCGACACAATCA | 59.848 | 41.667 | 0.00 | 0.00 | 38.45 | 2.57 |
2532 | 4548 | 6.232692 | ACGGGTAGCAAATAAACTACTCAAA | 58.767 | 36.000 | 0.00 | 0.00 | 39.41 | 2.69 |
2676 | 4692 | 2.910688 | TGTTGACAGAGTTGGGTCTC | 57.089 | 50.000 | 0.00 | 0.00 | 35.11 | 3.36 |
2718 | 4734 | 2.018644 | GCCTTAGCTAATGCCACTGCA | 61.019 | 52.381 | 19.63 | 0.00 | 44.13 | 4.41 |
2844 | 4860 | 1.811778 | AGGCTGCCCTGATGATAGAA | 58.188 | 50.000 | 16.57 | 0.00 | 40.94 | 2.10 |
2900 | 4917 | 5.708948 | CCTCAAACTTTGCAAATCCGATTA | 58.291 | 37.500 | 13.23 | 0.00 | 0.00 | 1.75 |
3004 | 5021 | 7.047891 | CCTATGCAGTTAATAAGGTCTGTCAA | 58.952 | 38.462 | 0.00 | 0.00 | 0.00 | 3.18 |
3105 | 5122 | 5.814376 | TCACTTCATGATGGAGAACCTCCTA | 60.814 | 44.000 | 7.93 | 1.95 | 40.97 | 2.94 |
3107 | 5124 | 3.198635 | TCACTTCATGATGGAGAACCTCC | 59.801 | 47.826 | 7.93 | 6.07 | 40.85 | 4.30 |
3152 | 5169 | 4.829064 | GTTGCAAACCTTCATCTACACA | 57.171 | 40.909 | 0.00 | 0.00 | 42.21 | 3.72 |
3196 | 5213 | 7.174946 | TCACAGGAAAAGTATGTCCAAGAAATC | 59.825 | 37.037 | 0.00 | 0.00 | 36.28 | 2.17 |
3269 | 5288 | 2.513753 | AGATCTAGGGTCTCTGCATCG | 58.486 | 52.381 | 0.00 | 0.00 | 0.00 | 3.84 |
3270 | 5289 | 4.343526 | TCAAAGATCTAGGGTCTCTGCATC | 59.656 | 45.833 | 0.00 | 0.00 | 0.00 | 3.91 |
3333 | 5354 | 1.408702 | CTAGCTCCTCTCCTTCAGCAC | 59.591 | 57.143 | 0.00 | 0.00 | 34.08 | 4.40 |
3449 | 5470 | 0.843309 | TCCAAGTTGCAGTCCCTTGA | 59.157 | 50.000 | 15.05 | 3.79 | 38.23 | 3.02 |
3454 | 5475 | 5.880332 | TCAGTTATATTCCAAGTTGCAGTCC | 59.120 | 40.000 | 0.00 | 0.00 | 0.00 | 3.85 |
3476 | 5497 | 0.970937 | CCCCGAGCTTGGTACTCTCA | 60.971 | 60.000 | 19.14 | 0.00 | 31.71 | 3.27 |
3550 | 5571 | 4.019321 | CCTCCTGGGTATGAAAGTTCAAGA | 60.019 | 45.833 | 0.00 | 0.00 | 41.13 | 3.02 |
3790 | 5811 | 8.488764 | GTGTATAAAATAAAGCGGAGATCTGAC | 58.511 | 37.037 | 0.00 | 0.00 | 0.00 | 3.51 |
3842 | 5863 | 1.074090 | TGGTTCCACCAGTCAGGGA | 60.074 | 57.895 | 0.00 | 0.00 | 44.79 | 4.20 |
4077 | 6099 | 1.726248 | CAAAACCGGCTGCAAATTAGC | 59.274 | 47.619 | 0.00 | 0.00 | 40.41 | 3.09 |
4079 | 6101 | 2.362397 | TCACAAAACCGGCTGCAAATTA | 59.638 | 40.909 | 0.00 | 0.00 | 0.00 | 1.40 |
4533 | 6641 | 2.785868 | CCCAGAGAAGATTTGGGCG | 58.214 | 57.895 | 0.00 | 0.00 | 44.63 | 6.13 |
4543 | 6651 | 2.650116 | GGACGCAGCTCCCAGAGAA | 61.650 | 63.158 | 0.00 | 0.00 | 0.00 | 2.87 |
4544 | 6652 | 3.071206 | GGACGCAGCTCCCAGAGA | 61.071 | 66.667 | 0.00 | 0.00 | 0.00 | 3.10 |
4585 | 6693 | 9.233232 | GAAAATAACCCTAATTTTATGCAGTCG | 57.767 | 33.333 | 0.00 | 0.00 | 36.82 | 4.18 |
5161 | 7280 | 5.105797 | TGCAGAAAGAAAACACAGACACATT | 60.106 | 36.000 | 0.00 | 0.00 | 0.00 | 2.71 |
5505 | 7625 | 2.740452 | CTACCTTATTCCCGCTCGAAC | 58.260 | 52.381 | 0.00 | 0.00 | 0.00 | 3.95 |
5588 | 7712 | 7.969690 | ATTCTCAGAGACTTTCATCTTCCTA | 57.030 | 36.000 | 0.00 | 0.00 | 0.00 | 2.94 |
5693 | 7821 | 1.166531 | GCAAGGTGCTCCTCAACGTT | 61.167 | 55.000 | 7.99 | 0.00 | 44.35 | 3.99 |
5855 | 8002 | 2.028748 | GTCCCTAGTGCCGAACAAAGTA | 60.029 | 50.000 | 0.00 | 0.00 | 0.00 | 2.24 |
5901 | 8048 | 2.363018 | TCCACTCCCTCTGGCTCG | 60.363 | 66.667 | 0.00 | 0.00 | 0.00 | 5.03 |
6074 | 8221 | 1.266867 | TGCAGCTCACTCCTATGGCA | 61.267 | 55.000 | 0.00 | 0.00 | 0.00 | 4.92 |
6165 | 8351 | 1.010125 | CAACAACGTCTGCAACCCG | 60.010 | 57.895 | 0.00 | 0.00 | 0.00 | 5.28 |
6287 | 8482 | 4.003788 | CCTCTGGTGGTTCGCCGT | 62.004 | 66.667 | 0.00 | 0.00 | 41.18 | 5.68 |
6293 | 8488 | 2.529744 | GGTGGCTCCTCTGGTGGTT | 61.530 | 63.158 | 0.00 | 0.00 | 0.00 | 3.67 |
6665 | 8888 | 2.025037 | ACCAAGATGAAGGGCATTGCTA | 60.025 | 45.455 | 8.82 | 0.00 | 37.34 | 3.49 |
6885 | 9114 | 2.982130 | GCCGTCTGGGAGACACAT | 59.018 | 61.111 | 4.69 | 0.00 | 45.30 | 3.21 |
7196 | 9438 | 1.262683 | GCATACGCTTCAGCCTCAATC | 59.737 | 52.381 | 0.00 | 0.00 | 37.91 | 2.67 |
7257 | 9503 | 0.179092 | ACCGCCTACCGCTTGTAATC | 60.179 | 55.000 | 0.00 | 0.00 | 35.03 | 1.75 |
7258 | 9504 | 0.251073 | AACCGCCTACCGCTTGTAAT | 59.749 | 50.000 | 0.00 | 0.00 | 35.03 | 1.89 |
7259 | 9505 | 0.894141 | TAACCGCCTACCGCTTGTAA | 59.106 | 50.000 | 0.00 | 0.00 | 35.03 | 2.41 |
7266 | 9514 | 3.152400 | AGCCCTAACCGCCTACCG | 61.152 | 66.667 | 0.00 | 0.00 | 0.00 | 4.02 |
7273 | 9523 | 0.251916 | TCAATCCACAGCCCTAACCG | 59.748 | 55.000 | 0.00 | 0.00 | 0.00 | 4.44 |
7300 | 9550 | 5.560724 | TGTTGAGATTGCCTAGCTAGTTTT | 58.439 | 37.500 | 19.31 | 1.49 | 0.00 | 2.43 |
7346 | 9606 | 2.004583 | AGCGTACGTGTTGTGCATAT | 57.995 | 45.000 | 17.90 | 0.00 | 31.89 | 1.78 |
7350 | 9610 | 0.854062 | TTGTAGCGTACGTGTTGTGC | 59.146 | 50.000 | 17.90 | 0.00 | 0.00 | 4.57 |
7360 | 9628 | 5.923114 | TGTTGTATAAACCGTTTGTAGCGTA | 59.077 | 36.000 | 6.77 | 0.00 | 0.00 | 4.42 |
7369 | 9652 | 6.665474 | TTATGCGATGTTGTATAAACCGTT | 57.335 | 33.333 | 0.00 | 0.00 | 0.00 | 4.44 |
7388 | 9676 | 7.011950 | TCCCTCATTGTTAAGCGTTGTATTATG | 59.988 | 37.037 | 0.00 | 0.00 | 0.00 | 1.90 |
7416 | 9704 | 4.680172 | CGACAGAAGAGCATTCTTGGAGAT | 60.680 | 45.833 | 1.70 | 0.00 | 43.63 | 2.75 |
7479 | 9767 | 1.976474 | TCTCAAAATGGTGGCCGGC | 60.976 | 57.895 | 21.18 | 21.18 | 0.00 | 6.13 |
7554 | 9844 | 3.119388 | TCACGAGTTACCGGATTGTTAGG | 60.119 | 47.826 | 9.46 | 0.00 | 0.00 | 2.69 |
7582 | 9876 | 3.289834 | AAGCTGGCTTGCCGTGTG | 61.290 | 61.111 | 7.05 | 0.00 | 34.60 | 3.82 |
7623 | 11208 | 9.185680 | TCACATAAGTTAGCTAGTACAGATCAA | 57.814 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
7695 | 11280 | 4.479993 | GGGTCATCGCCAGCAGCT | 62.480 | 66.667 | 0.00 | 0.00 | 40.39 | 4.24 |
7765 | 11350 | 0.179051 | TGAACTTGCCGTAACCCGTT | 60.179 | 50.000 | 0.00 | 0.00 | 33.66 | 4.44 |
7766 | 11351 | 0.035739 | ATGAACTTGCCGTAACCCGT | 59.964 | 50.000 | 0.00 | 0.00 | 33.66 | 5.28 |
7891 | 11476 | 2.352225 | GCTGAAGCTATCGATGATCGGT | 60.352 | 50.000 | 15.48 | 10.83 | 38.09 | 4.69 |
8101 | 11692 | 2.159421 | GCCTGTCTCGACGTTCATCTTA | 60.159 | 50.000 | 0.00 | 0.00 | 0.00 | 2.10 |
8124 | 11715 | 2.097036 | TCTTTAGATCGGGCTCGTTCA | 58.903 | 47.619 | 18.72 | 2.85 | 37.52 | 3.18 |
8255 | 11855 | 5.163385 | CCAACATGCAAGGGTCATCAAATAT | 60.163 | 40.000 | 0.00 | 0.00 | 0.00 | 1.28 |
8350 | 11954 | 8.587952 | AAAATAATTCCACCTTCTTTTTGTCG | 57.412 | 30.769 | 0.00 | 0.00 | 0.00 | 4.35 |
8374 | 11978 | 4.126520 | ACATCTGCCCTTTCCCTAAAAA | 57.873 | 40.909 | 0.00 | 0.00 | 0.00 | 1.94 |
8375 | 11979 | 3.825908 | ACATCTGCCCTTTCCCTAAAA | 57.174 | 42.857 | 0.00 | 0.00 | 0.00 | 1.52 |
8376 | 11980 | 3.850173 | AGTACATCTGCCCTTTCCCTAAA | 59.150 | 43.478 | 0.00 | 0.00 | 0.00 | 1.85 |
8377 | 11981 | 3.199946 | CAGTACATCTGCCCTTTCCCTAA | 59.800 | 47.826 | 0.00 | 0.00 | 37.36 | 2.69 |
8378 | 11982 | 2.771943 | CAGTACATCTGCCCTTTCCCTA | 59.228 | 50.000 | 0.00 | 0.00 | 37.36 | 3.53 |
8379 | 11983 | 1.561542 | CAGTACATCTGCCCTTTCCCT | 59.438 | 52.381 | 0.00 | 0.00 | 37.36 | 4.20 |
8380 | 11984 | 2.044123 | CAGTACATCTGCCCTTTCCC | 57.956 | 55.000 | 0.00 | 0.00 | 37.36 | 3.97 |
8399 | 12003 | 2.358267 | CTCTCCTCTGAAATGCATTGGC | 59.642 | 50.000 | 13.82 | 9.08 | 41.68 | 4.52 |
8400 | 12004 | 2.950309 | CCTCTCCTCTGAAATGCATTGG | 59.050 | 50.000 | 13.82 | 9.55 | 0.00 | 3.16 |
8401 | 12005 | 2.358267 | GCCTCTCCTCTGAAATGCATTG | 59.642 | 50.000 | 13.82 | 0.24 | 0.00 | 2.82 |
8402 | 12006 | 2.025605 | TGCCTCTCCTCTGAAATGCATT | 60.026 | 45.455 | 5.99 | 5.99 | 0.00 | 3.56 |
8403 | 12007 | 1.562942 | TGCCTCTCCTCTGAAATGCAT | 59.437 | 47.619 | 0.00 | 0.00 | 0.00 | 3.96 |
8404 | 12008 | 0.986527 | TGCCTCTCCTCTGAAATGCA | 59.013 | 50.000 | 0.00 | 0.00 | 0.00 | 3.96 |
8405 | 12009 | 1.209019 | TCTGCCTCTCCTCTGAAATGC | 59.791 | 52.381 | 0.00 | 0.00 | 0.00 | 3.56 |
8406 | 12010 | 3.623906 | TTCTGCCTCTCCTCTGAAATG | 57.376 | 47.619 | 0.00 | 0.00 | 0.00 | 2.32 |
8407 | 12011 | 4.647564 | TTTTCTGCCTCTCCTCTGAAAT | 57.352 | 40.909 | 0.00 | 0.00 | 32.74 | 2.17 |
8408 | 12012 | 4.141390 | ACTTTTTCTGCCTCTCCTCTGAAA | 60.141 | 41.667 | 0.00 | 0.00 | 0.00 | 2.69 |
8409 | 12013 | 3.392616 | ACTTTTTCTGCCTCTCCTCTGAA | 59.607 | 43.478 | 0.00 | 0.00 | 0.00 | 3.02 |
8410 | 12014 | 2.975489 | ACTTTTTCTGCCTCTCCTCTGA | 59.025 | 45.455 | 0.00 | 0.00 | 0.00 | 3.27 |
8411 | 12015 | 3.072944 | CACTTTTTCTGCCTCTCCTCTG | 58.927 | 50.000 | 0.00 | 0.00 | 0.00 | 3.35 |
8412 | 12016 | 2.708325 | ACACTTTTTCTGCCTCTCCTCT | 59.292 | 45.455 | 0.00 | 0.00 | 0.00 | 3.69 |
8413 | 12017 | 3.070748 | GACACTTTTTCTGCCTCTCCTC | 58.929 | 50.000 | 0.00 | 0.00 | 0.00 | 3.71 |
8414 | 12018 | 2.439507 | TGACACTTTTTCTGCCTCTCCT | 59.560 | 45.455 | 0.00 | 0.00 | 0.00 | 3.69 |
8415 | 12019 | 2.810852 | CTGACACTTTTTCTGCCTCTCC | 59.189 | 50.000 | 0.00 | 0.00 | 0.00 | 3.71 |
8416 | 12020 | 3.471680 | ACTGACACTTTTTCTGCCTCTC | 58.528 | 45.455 | 0.00 | 0.00 | 0.00 | 3.20 |
8417 | 12021 | 3.567478 | ACTGACACTTTTTCTGCCTCT | 57.433 | 42.857 | 0.00 | 0.00 | 0.00 | 3.69 |
8418 | 12022 | 4.574828 | TGTAACTGACACTTTTTCTGCCTC | 59.425 | 41.667 | 0.00 | 0.00 | 31.20 | 4.70 |
8419 | 12023 | 4.523083 | TGTAACTGACACTTTTTCTGCCT | 58.477 | 39.130 | 0.00 | 0.00 | 31.20 | 4.75 |
8420 | 12024 | 4.261197 | CCTGTAACTGACACTTTTTCTGCC | 60.261 | 45.833 | 0.00 | 0.00 | 33.31 | 4.85 |
8421 | 12025 | 4.335594 | ACCTGTAACTGACACTTTTTCTGC | 59.664 | 41.667 | 0.00 | 0.00 | 33.31 | 4.26 |
8422 | 12026 | 6.436843 | AACCTGTAACTGACACTTTTTCTG | 57.563 | 37.500 | 0.00 | 0.00 | 33.31 | 3.02 |
8423 | 12027 | 7.107542 | TGTAACCTGTAACTGACACTTTTTCT | 58.892 | 34.615 | 0.00 | 0.00 | 33.31 | 2.52 |
8424 | 12028 | 7.311364 | TGTAACCTGTAACTGACACTTTTTC | 57.689 | 36.000 | 0.00 | 0.00 | 33.31 | 2.29 |
8425 | 12029 | 7.690952 | TTGTAACCTGTAACTGACACTTTTT | 57.309 | 32.000 | 0.00 | 0.00 | 33.31 | 1.94 |
8426 | 12030 | 7.627726 | GCTTTGTAACCTGTAACTGACACTTTT | 60.628 | 37.037 | 0.00 | 0.00 | 33.31 | 2.27 |
8427 | 12031 | 6.183360 | GCTTTGTAACCTGTAACTGACACTTT | 60.183 | 38.462 | 0.00 | 0.00 | 33.31 | 2.66 |
8428 | 12032 | 5.296035 | GCTTTGTAACCTGTAACTGACACTT | 59.704 | 40.000 | 0.00 | 0.00 | 33.31 | 3.16 |
8429 | 12033 | 4.814771 | GCTTTGTAACCTGTAACTGACACT | 59.185 | 41.667 | 0.00 | 0.00 | 33.31 | 3.55 |
8430 | 12034 | 4.318546 | CGCTTTGTAACCTGTAACTGACAC | 60.319 | 45.833 | 0.00 | 0.00 | 33.31 | 3.67 |
8431 | 12035 | 3.805422 | CGCTTTGTAACCTGTAACTGACA | 59.195 | 43.478 | 0.00 | 0.00 | 36.35 | 3.58 |
8432 | 12036 | 3.805971 | ACGCTTTGTAACCTGTAACTGAC | 59.194 | 43.478 | 0.00 | 0.00 | 0.00 | 3.51 |
8433 | 12037 | 3.805422 | CACGCTTTGTAACCTGTAACTGA | 59.195 | 43.478 | 0.00 | 0.00 | 0.00 | 3.41 |
8434 | 12038 | 3.558418 | ACACGCTTTGTAACCTGTAACTG | 59.442 | 43.478 | 0.00 | 0.00 | 36.32 | 3.16 |
8435 | 12039 | 3.800531 | ACACGCTTTGTAACCTGTAACT | 58.199 | 40.909 | 0.00 | 0.00 | 36.32 | 2.24 |
8436 | 12040 | 5.655893 | TTACACGCTTTGTAACCTGTAAC | 57.344 | 39.130 | 4.18 | 0.00 | 44.32 | 2.50 |
8445 | 12049 | 1.275856 | ACCCCGATTACACGCTTTGTA | 59.724 | 47.619 | 0.00 | 0.00 | 39.91 | 2.41 |
8446 | 12050 | 0.035739 | ACCCCGATTACACGCTTTGT | 59.964 | 50.000 | 0.00 | 0.00 | 42.84 | 2.83 |
8447 | 12051 | 1.129811 | GAACCCCGATTACACGCTTTG | 59.870 | 52.381 | 0.00 | 0.00 | 0.00 | 2.77 |
8448 | 12052 | 1.445871 | GAACCCCGATTACACGCTTT | 58.554 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
8449 | 12053 | 0.392060 | GGAACCCCGATTACACGCTT | 60.392 | 55.000 | 0.00 | 0.00 | 0.00 | 4.68 |
8450 | 12054 | 1.219935 | GGAACCCCGATTACACGCT | 59.780 | 57.895 | 0.00 | 0.00 | 0.00 | 5.07 |
8451 | 12055 | 3.803886 | GGAACCCCGATTACACGC | 58.196 | 61.111 | 0.00 | 0.00 | 0.00 | 5.34 |
8470 | 12074 | 1.085501 | TTATTTCCTTCGCGGGCGTC | 61.086 | 55.000 | 13.21 | 0.00 | 40.74 | 5.19 |
8471 | 12075 | 0.674269 | TTTATTTCCTTCGCGGGCGT | 60.674 | 50.000 | 13.21 | 0.00 | 40.74 | 5.68 |
8472 | 12076 | 0.448593 | TTTTATTTCCTTCGCGGGCG | 59.551 | 50.000 | 6.13 | 6.74 | 41.35 | 6.13 |
8473 | 12077 | 2.459934 | CATTTTATTTCCTTCGCGGGC | 58.540 | 47.619 | 6.13 | 0.00 | 0.00 | 6.13 |
8474 | 12078 | 2.425668 | ACCATTTTATTTCCTTCGCGGG | 59.574 | 45.455 | 6.13 | 0.00 | 0.00 | 6.13 |
8475 | 12079 | 3.775661 | ACCATTTTATTTCCTTCGCGG | 57.224 | 42.857 | 6.13 | 0.00 | 0.00 | 6.46 |
8476 | 12080 | 6.252655 | CCTTTAACCATTTTATTTCCTTCGCG | 59.747 | 38.462 | 0.00 | 0.00 | 0.00 | 5.87 |
8477 | 12081 | 7.062956 | CACCTTTAACCATTTTATTTCCTTCGC | 59.937 | 37.037 | 0.00 | 0.00 | 0.00 | 4.70 |
8478 | 12082 | 7.544217 | CCACCTTTAACCATTTTATTTCCTTCG | 59.456 | 37.037 | 0.00 | 0.00 | 0.00 | 3.79 |
8479 | 12083 | 8.590204 | TCCACCTTTAACCATTTTATTTCCTTC | 58.410 | 33.333 | 0.00 | 0.00 | 0.00 | 3.46 |
8480 | 12084 | 8.499288 | TCCACCTTTAACCATTTTATTTCCTT | 57.501 | 30.769 | 0.00 | 0.00 | 0.00 | 3.36 |
8481 | 12085 | 8.499288 | TTCCACCTTTAACCATTTTATTTCCT | 57.501 | 30.769 | 0.00 | 0.00 | 0.00 | 3.36 |
8482 | 12086 | 9.733556 | AATTCCACCTTTAACCATTTTATTTCC | 57.266 | 29.630 | 0.00 | 0.00 | 0.00 | 3.13 |
8492 | 12096 | 8.862085 | CCTTAAGTAAAATTCCACCTTTAACCA | 58.138 | 33.333 | 0.97 | 0.00 | 0.00 | 3.67 |
8493 | 12097 | 9.081204 | TCCTTAAGTAAAATTCCACCTTTAACC | 57.919 | 33.333 | 0.97 | 0.00 | 0.00 | 2.85 |
8496 | 12100 | 9.871175 | ACTTCCTTAAGTAAAATTCCACCTTTA | 57.129 | 29.630 | 0.97 | 0.00 | 44.26 | 1.85 |
8514 | 12118 | 6.150976 | TCGAAACCACGAGTATTACTTCCTTA | 59.849 | 38.462 | 0.00 | 0.00 | 37.37 | 2.69 |
8537 | 12141 | 0.234884 | GAAAAGCACAACCGTCCTCG | 59.765 | 55.000 | 0.00 | 0.00 | 0.00 | 4.63 |
8576 | 12180 | 6.480524 | AACAACCTGCAAAAAGAAAAACTC | 57.519 | 33.333 | 0.00 | 0.00 | 0.00 | 3.01 |
8577 | 12181 | 7.802738 | GTTAACAACCTGCAAAAAGAAAAACT | 58.197 | 30.769 | 0.00 | 0.00 | 0.00 | 2.66 |
8594 | 12198 | 5.678132 | ATCTAAACACGTGGGTTAACAAC | 57.322 | 39.130 | 21.57 | 4.36 | 0.00 | 3.32 |
8595 | 12199 | 5.008811 | CCAATCTAAACACGTGGGTTAACAA | 59.991 | 40.000 | 21.57 | 6.77 | 0.00 | 2.83 |
8596 | 12200 | 4.515944 | CCAATCTAAACACGTGGGTTAACA | 59.484 | 41.667 | 21.57 | 7.58 | 0.00 | 2.41 |
8597 | 12201 | 4.756135 | TCCAATCTAAACACGTGGGTTAAC | 59.244 | 41.667 | 21.57 | 0.00 | 0.00 | 2.01 |
8598 | 12202 | 4.970711 | TCCAATCTAAACACGTGGGTTAA | 58.029 | 39.130 | 21.57 | 8.92 | 0.00 | 2.01 |
8599 | 12203 | 4.620589 | TCCAATCTAAACACGTGGGTTA | 57.379 | 40.909 | 21.57 | 15.83 | 0.00 | 2.85 |
8600 | 12204 | 3.495434 | TCCAATCTAAACACGTGGGTT | 57.505 | 42.857 | 21.57 | 15.54 | 0.00 | 4.11 |
8601 | 12205 | 3.495434 | TTCCAATCTAAACACGTGGGT | 57.505 | 42.857 | 21.57 | 9.54 | 0.00 | 4.51 |
8602 | 12206 | 5.160641 | CAATTTCCAATCTAAACACGTGGG | 58.839 | 41.667 | 21.57 | 8.69 | 0.00 | 4.61 |
8603 | 12207 | 5.160641 | CCAATTTCCAATCTAAACACGTGG | 58.839 | 41.667 | 21.57 | 1.33 | 0.00 | 4.94 |
8604 | 12208 | 4.621034 | GCCAATTTCCAATCTAAACACGTG | 59.379 | 41.667 | 15.48 | 15.48 | 0.00 | 4.49 |
8605 | 12209 | 4.321675 | GGCCAATTTCCAATCTAAACACGT | 60.322 | 41.667 | 0.00 | 0.00 | 0.00 | 4.49 |
8606 | 12210 | 4.173256 | GGCCAATTTCCAATCTAAACACG | 58.827 | 43.478 | 0.00 | 0.00 | 0.00 | 4.49 |
8607 | 12211 | 4.929211 | GTGGCCAATTTCCAATCTAAACAC | 59.071 | 41.667 | 7.24 | 0.00 | 35.01 | 3.32 |
8608 | 12212 | 4.590647 | TGTGGCCAATTTCCAATCTAAACA | 59.409 | 37.500 | 7.24 | 0.00 | 35.01 | 2.83 |
8609 | 12213 | 4.929211 | GTGTGGCCAATTTCCAATCTAAAC | 59.071 | 41.667 | 7.24 | 0.00 | 35.01 | 2.01 |
8610 | 12214 | 4.321601 | CGTGTGGCCAATTTCCAATCTAAA | 60.322 | 41.667 | 7.24 | 0.00 | 35.01 | 1.85 |
8611 | 12215 | 3.192422 | CGTGTGGCCAATTTCCAATCTAA | 59.808 | 43.478 | 7.24 | 0.00 | 35.01 | 2.10 |
8612 | 12216 | 2.752354 | CGTGTGGCCAATTTCCAATCTA | 59.248 | 45.455 | 7.24 | 0.00 | 35.01 | 1.98 |
8613 | 12217 | 1.545582 | CGTGTGGCCAATTTCCAATCT | 59.454 | 47.619 | 7.24 | 0.00 | 35.01 | 2.40 |
8614 | 12218 | 1.272212 | ACGTGTGGCCAATTTCCAATC | 59.728 | 47.619 | 7.24 | 0.00 | 35.01 | 2.67 |
8615 | 12219 | 1.000731 | CACGTGTGGCCAATTTCCAAT | 59.999 | 47.619 | 7.24 | 0.00 | 35.01 | 3.16 |
8616 | 12220 | 0.387202 | CACGTGTGGCCAATTTCCAA | 59.613 | 50.000 | 7.24 | 0.00 | 35.01 | 3.53 |
8617 | 12221 | 2.037053 | CACGTGTGGCCAATTTCCA | 58.963 | 52.632 | 7.24 | 0.00 | 0.00 | 3.53 |
8618 | 12222 | 1.372872 | GCACGTGTGGCCAATTTCC | 60.373 | 57.895 | 18.38 | 0.00 | 0.00 | 3.13 |
8619 | 12223 | 0.939106 | GTGCACGTGTGGCCAATTTC | 60.939 | 55.000 | 18.38 | 0.00 | 0.00 | 2.17 |
8620 | 12224 | 1.067250 | GTGCACGTGTGGCCAATTT | 59.933 | 52.632 | 18.38 | 0.00 | 0.00 | 1.82 |
8621 | 12225 | 2.124060 | TGTGCACGTGTGGCCAATT | 61.124 | 52.632 | 18.38 | 0.00 | 0.00 | 2.32 |
8622 | 12226 | 2.518112 | TGTGCACGTGTGGCCAAT | 60.518 | 55.556 | 18.38 | 0.00 | 0.00 | 3.16 |
8623 | 12227 | 3.513438 | GTGTGCACGTGTGGCCAA | 61.513 | 61.111 | 18.38 | 0.00 | 0.00 | 4.52 |
8624 | 12228 | 4.481617 | AGTGTGCACGTGTGGCCA | 62.482 | 61.111 | 18.38 | 0.00 | 36.20 | 5.36 |
8625 | 12229 | 2.709125 | TAGAGTGTGCACGTGTGGCC | 62.709 | 60.000 | 18.38 | 0.00 | 36.20 | 5.36 |
8626 | 12230 | 0.878523 | TTAGAGTGTGCACGTGTGGC | 60.879 | 55.000 | 18.38 | 3.00 | 36.20 | 5.01 |
8627 | 12231 | 1.795768 | ATTAGAGTGTGCACGTGTGG | 58.204 | 50.000 | 18.38 | 0.00 | 36.20 | 4.17 |
8628 | 12232 | 6.828502 | ATATAATTAGAGTGTGCACGTGTG | 57.171 | 37.500 | 18.38 | 0.00 | 36.20 | 3.82 |
8629 | 12233 | 7.116376 | GCATATATAATTAGAGTGTGCACGTGT | 59.884 | 37.037 | 18.38 | 2.99 | 36.20 | 4.49 |
8630 | 12234 | 7.329471 | AGCATATATAATTAGAGTGTGCACGTG | 59.671 | 37.037 | 12.28 | 12.28 | 36.20 | 4.49 |
8631 | 12235 | 7.378966 | AGCATATATAATTAGAGTGTGCACGT | 58.621 | 34.615 | 13.13 | 0.97 | 36.20 | 4.49 |
8632 | 12236 | 7.818493 | AGCATATATAATTAGAGTGTGCACG | 57.182 | 36.000 | 13.13 | 0.00 | 36.20 | 5.34 |
8633 | 12237 | 9.307121 | CCTAGCATATATAATTAGAGTGTGCAC | 57.693 | 37.037 | 10.75 | 10.75 | 32.82 | 4.57 |
8634 | 12238 | 9.255029 | TCCTAGCATATATAATTAGAGTGTGCA | 57.745 | 33.333 | 13.24 | 0.00 | 32.82 | 4.57 |
8652 | 12256 | 9.941325 | CAGAGACTGAAAATATATTCCTAGCAT | 57.059 | 33.333 | 0.00 | 0.00 | 32.44 | 3.79 |
8653 | 12257 | 7.875041 | GCAGAGACTGAAAATATATTCCTAGCA | 59.125 | 37.037 | 0.00 | 0.00 | 32.44 | 3.49 |
8654 | 12258 | 7.333174 | GGCAGAGACTGAAAATATATTCCTAGC | 59.667 | 40.741 | 0.00 | 0.00 | 32.44 | 3.42 |
8655 | 12259 | 8.592809 | AGGCAGAGACTGAAAATATATTCCTAG | 58.407 | 37.037 | 0.00 | 0.60 | 32.44 | 3.02 |
8656 | 12260 | 8.370940 | CAGGCAGAGACTGAAAATATATTCCTA | 58.629 | 37.037 | 0.00 | 0.00 | 42.14 | 2.94 |
8657 | 12261 | 7.222872 | CAGGCAGAGACTGAAAATATATTCCT | 58.777 | 38.462 | 0.00 | 0.00 | 42.14 | 3.36 |
8658 | 12262 | 6.072783 | GCAGGCAGAGACTGAAAATATATTCC | 60.073 | 42.308 | 3.60 | 0.00 | 42.14 | 3.01 |
8659 | 12263 | 6.484643 | TGCAGGCAGAGACTGAAAATATATTC | 59.515 | 38.462 | 3.60 | 0.00 | 42.14 | 1.75 |
8660 | 12264 | 6.359804 | TGCAGGCAGAGACTGAAAATATATT | 58.640 | 36.000 | 3.60 | 0.00 | 42.14 | 1.28 |
8661 | 12265 | 5.933617 | TGCAGGCAGAGACTGAAAATATAT | 58.066 | 37.500 | 3.60 | 0.00 | 42.14 | 0.86 |
8662 | 12266 | 5.357742 | TGCAGGCAGAGACTGAAAATATA | 57.642 | 39.130 | 3.60 | 0.00 | 42.14 | 0.86 |
8663 | 12267 | 4.226427 | TGCAGGCAGAGACTGAAAATAT | 57.774 | 40.909 | 3.60 | 0.00 | 42.14 | 1.28 |
8664 | 12268 | 3.701205 | TGCAGGCAGAGACTGAAAATA | 57.299 | 42.857 | 3.60 | 0.00 | 42.14 | 1.40 |
8665 | 12269 | 2.574006 | TGCAGGCAGAGACTGAAAAT | 57.426 | 45.000 | 3.60 | 0.00 | 42.14 | 1.82 |
8666 | 12270 | 2.156917 | CATGCAGGCAGAGACTGAAAA | 58.843 | 47.619 | 3.60 | 0.00 | 42.14 | 2.29 |
8689 | 12293 | 3.883744 | CTTCCGTGCCTGCGACCTT | 62.884 | 63.158 | 0.00 | 0.00 | 0.00 | 3.50 |
8690 | 12294 | 4.379243 | CTTCCGTGCCTGCGACCT | 62.379 | 66.667 | 0.00 | 0.00 | 0.00 | 3.85 |
8691 | 12295 | 4.373116 | TCTTCCGTGCCTGCGACC | 62.373 | 66.667 | 0.00 | 0.00 | 0.00 | 4.79 |
8692 | 12296 | 3.112709 | GTCTTCCGTGCCTGCGAC | 61.113 | 66.667 | 0.00 | 0.00 | 0.00 | 5.19 |
8693 | 12297 | 4.717629 | CGTCTTCCGTGCCTGCGA | 62.718 | 66.667 | 0.00 | 0.00 | 0.00 | 5.10 |
8699 | 12303 | 4.072088 | CAACCGCGTCTTCCGTGC | 62.072 | 66.667 | 4.92 | 0.00 | 45.59 | 5.34 |
8700 | 12304 | 4.072088 | GCAACCGCGTCTTCCGTG | 62.072 | 66.667 | 4.92 | 0.00 | 46.49 | 4.94 |
8701 | 12305 | 4.595538 | TGCAACCGCGTCTTCCGT | 62.596 | 61.111 | 4.92 | 0.00 | 42.97 | 4.69 |
8702 | 12306 | 3.777925 | CTGCAACCGCGTCTTCCG | 61.778 | 66.667 | 4.92 | 0.00 | 42.97 | 4.30 |
8703 | 12307 | 2.357034 | TCTGCAACCGCGTCTTCC | 60.357 | 61.111 | 4.92 | 0.00 | 42.97 | 3.46 |
8704 | 12308 | 1.291877 | ATGTCTGCAACCGCGTCTTC | 61.292 | 55.000 | 4.92 | 0.00 | 42.97 | 2.87 |
8705 | 12309 | 1.301716 | ATGTCTGCAACCGCGTCTT | 60.302 | 52.632 | 4.92 | 0.00 | 42.97 | 3.01 |
8706 | 12310 | 2.029288 | CATGTCTGCAACCGCGTCT | 61.029 | 57.895 | 4.92 | 0.00 | 42.97 | 4.18 |
8707 | 12311 | 2.476051 | CATGTCTGCAACCGCGTC | 59.524 | 61.111 | 4.92 | 0.00 | 42.97 | 5.19 |
8708 | 12312 | 3.049674 | CCATGTCTGCAACCGCGT | 61.050 | 61.111 | 4.92 | 0.00 | 42.97 | 6.01 |
8709 | 12313 | 3.803082 | CCCATGTCTGCAACCGCG | 61.803 | 66.667 | 0.00 | 0.00 | 42.97 | 6.46 |
8710 | 12314 | 2.359850 | TCCCATGTCTGCAACCGC | 60.360 | 61.111 | 0.00 | 0.00 | 39.24 | 5.68 |
8723 | 12327 | 4.100084 | CTGCGACCATGCCTCCCA | 62.100 | 66.667 | 0.00 | 0.00 | 0.00 | 4.37 |
8724 | 12328 | 3.785859 | TCTGCGACCATGCCTCCC | 61.786 | 66.667 | 0.00 | 0.00 | 0.00 | 4.30 |
8731 | 12335 | 2.994995 | TCCCGTGTCTGCGACCAT | 60.995 | 61.111 | 6.30 | 0.00 | 0.00 | 3.55 |
8732 | 12336 | 3.680786 | CTCCCGTGTCTGCGACCA | 61.681 | 66.667 | 6.30 | 0.00 | 0.00 | 4.02 |
8741 | 12345 | 3.688159 | GTACCGTGCCTCCCGTGT | 61.688 | 66.667 | 0.00 | 0.00 | 0.00 | 4.49 |
8768 | 12381 | 2.951745 | CATCGCTGTCGTCGAGGC | 60.952 | 66.667 | 0.00 | 2.44 | 39.47 | 4.70 |
8770 | 12383 | 1.930188 | CGTCATCGCTGTCGTCGAG | 60.930 | 63.158 | 0.00 | 0.00 | 39.47 | 4.04 |
8845 | 12458 | 0.685785 | TCGCTGCTCCAGATCCTCTT | 60.686 | 55.000 | 0.00 | 0.00 | 32.44 | 2.85 |
8848 | 12461 | 0.975040 | AACTCGCTGCTCCAGATCCT | 60.975 | 55.000 | 0.00 | 0.00 | 32.44 | 3.24 |
8851 | 12464 | 1.449246 | GCAACTCGCTGCTCCAGAT | 60.449 | 57.895 | 0.00 | 0.00 | 39.34 | 2.90 |
8852 | 12465 | 2.047844 | GCAACTCGCTGCTCCAGA | 60.048 | 61.111 | 0.00 | 0.00 | 39.34 | 3.86 |
8907 | 12520 | 2.669569 | CACCCGCACCTGACTTGG | 60.670 | 66.667 | 0.00 | 0.00 | 0.00 | 3.61 |
8909 | 12522 | 3.168528 | ACCACCCGCACCTGACTT | 61.169 | 61.111 | 0.00 | 0.00 | 0.00 | 3.01 |
8910 | 12523 | 3.941188 | CACCACCCGCACCTGACT | 61.941 | 66.667 | 0.00 | 0.00 | 0.00 | 3.41 |
8962 | 12576 | 0.324368 | AGTCGGCTGGTAGTCCATCA | 60.324 | 55.000 | 0.00 | 0.00 | 43.43 | 3.07 |
8964 | 12578 | 0.537188 | CAAGTCGGCTGGTAGTCCAT | 59.463 | 55.000 | 0.00 | 0.00 | 43.43 | 3.41 |
8970 | 12584 | 0.177141 | GGCATACAAGTCGGCTGGTA | 59.823 | 55.000 | 6.75 | 6.75 | 35.74 | 3.25 |
8990 | 12605 | 2.633488 | GCTTCCAGATAGCCGTTCTTT | 58.367 | 47.619 | 0.00 | 0.00 | 32.45 | 2.52 |
9001 | 12616 | 2.158784 | GCTCTTCTGATGGCTTCCAGAT | 60.159 | 50.000 | 0.00 | 0.00 | 38.97 | 2.90 |
9003 | 12618 | 1.666054 | GCTCTTCTGATGGCTTCCAG | 58.334 | 55.000 | 0.00 | 0.00 | 36.75 | 3.86 |
9004 | 12619 | 0.107993 | CGCTCTTCTGATGGCTTCCA | 60.108 | 55.000 | 0.00 | 0.00 | 38.19 | 3.53 |
9022 | 12637 | 1.690219 | CCCCATCTCCTCCTTCACCG | 61.690 | 65.000 | 0.00 | 0.00 | 0.00 | 4.94 |
9043 | 12658 | 1.595382 | GAATCGCACCCCTCCATCG | 60.595 | 63.158 | 0.00 | 0.00 | 0.00 | 3.84 |
9044 | 12659 | 0.181350 | AAGAATCGCACCCCTCCATC | 59.819 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
9045 | 12660 | 0.107017 | CAAGAATCGCACCCCTCCAT | 60.107 | 55.000 | 0.00 | 0.00 | 0.00 | 3.41 |
9046 | 12661 | 1.299648 | CAAGAATCGCACCCCTCCA | 59.700 | 57.895 | 0.00 | 0.00 | 0.00 | 3.86 |
9082 | 12700 | 2.621998 | TCTCGTCCGCCCTCTATTTAAG | 59.378 | 50.000 | 0.00 | 0.00 | 0.00 | 1.85 |
9101 | 12719 | 1.273269 | AATGCAGGCTGAGCTCCTCT | 61.273 | 55.000 | 20.86 | 2.92 | 0.00 | 3.69 |
9118 | 12736 | 0.175531 | GGGCTGGCATTAAACGCAAT | 59.824 | 50.000 | 2.88 | 0.00 | 0.00 | 3.56 |
9178 | 12796 | 0.446222 | CTCCATTAAACACGCGTGGG | 59.554 | 55.000 | 39.21 | 29.04 | 34.19 | 4.61 |
9200 | 12818 | 0.036952 | CCTCCTCGCCGCATTCATAT | 60.037 | 55.000 | 0.00 | 0.00 | 0.00 | 1.78 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.