Multiple sequence alignment - TraesCS7B01G410600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G410600 chr7B 100.000 3955 0 0 1 3955 679680319 679676365 0.000000e+00 7304.0
1 TraesCS7B01G410600 chr7B 96.264 1258 39 4 2698 3955 532150820 532152069 0.000000e+00 2056.0
2 TraesCS7B01G410600 chr7B 95.707 1258 47 3 2698 3955 69988083 69986833 0.000000e+00 2017.0
3 TraesCS7B01G410600 chr7B 95.704 931 34 6 1623 2551 69988992 69988066 0.000000e+00 1493.0
4 TraesCS7B01G410600 chr7B 95.336 922 35 7 1623 2541 532149913 532150829 0.000000e+00 1458.0
5 TraesCS7B01G410600 chr7B 95.082 549 25 1 1088 1634 69989872 69989324 0.000000e+00 863.0
6 TraesCS7B01G410600 chr7B 95.082 549 25 1 1088 1634 532149033 532149581 0.000000e+00 863.0
7 TraesCS7B01G410600 chr7B 89.602 452 39 5 623 1074 532148535 532148978 5.740000e-158 568.0
8 TraesCS7B01G410600 chr7B 88.816 456 45 4 622 1077 69990373 69989924 4.470000e-154 555.0
9 TraesCS7B01G410600 chr1B 95.628 1258 47 4 2698 3955 17704493 17703244 0.000000e+00 2012.0
10 TraesCS7B01G410600 chr1B 86.465 495 52 8 2050 2539 419284305 419284789 2.710000e-146 529.0
11 TraesCS7B01G410600 chr1B 92.945 326 17 2 1088 1413 17704844 17704525 1.660000e-128 470.0
12 TraesCS7B01G410600 chr1B 85.479 365 44 5 1858 2220 112207196 112207553 4.830000e-99 372.0
13 TraesCS7B01G410600 chr1B 87.745 204 22 1 2275 2478 112207552 112207752 6.610000e-58 235.0
14 TraesCS7B01G410600 chr1B 100.000 45 0 0 2497 2541 17704528 17704484 2.530000e-12 84.2
15 TraesCS7B01G410600 chr5A 95.390 1258 51 3 2698 3955 387354651 387355901 0.000000e+00 1995.0
16 TraesCS7B01G410600 chr5A 95.543 718 29 3 1826 2541 387353944 387354660 0.000000e+00 1146.0
17 TraesCS7B01G410600 chr3B 94.833 1258 49 6 2698 3955 736663780 736665021 0.000000e+00 1949.0
18 TraesCS7B01G410600 chr3B 93.059 389 17 4 2159 2538 736663399 736663786 9.600000e-156 560.0
19 TraesCS7B01G410600 chr7A 94.811 1137 44 4 2819 3955 641313045 641314166 0.000000e+00 1759.0
20 TraesCS7B01G410600 chr7A 93.390 469 30 1 622 1090 641312184 641312651 0.000000e+00 693.0
21 TraesCS7B01G410600 chr7A 91.372 452 33 4 620 1071 137842377 137842822 7.260000e-172 614.0
22 TraesCS7B01G410600 chr7A 95.912 318 13 0 1088 1405 641312704 641313021 2.110000e-142 516.0
23 TraesCS7B01G410600 chr7A 91.798 317 14 8 308 622 692051804 692051498 7.850000e-117 431.0
24 TraesCS7B01G410600 chr7A 96.186 236 9 0 1364 1599 137843101 137843336 1.720000e-103 387.0
25 TraesCS7B01G410600 chr7A 98.157 217 3 1 1 216 692052018 692051802 1.040000e-100 377.0
26 TraesCS7B01G410600 chr6D 95.276 1016 41 3 2940 3955 453936128 453935120 0.000000e+00 1604.0
27 TraesCS7B01G410600 chr6D 93.636 330 15 1 1088 1417 453936454 453936131 4.590000e-134 488.0
28 TraesCS7B01G410600 chr6D 82.294 497 47 23 623 1090 453936983 453936499 3.700000e-105 392.0
29 TraesCS7B01G410600 chr6D 92.366 131 9 1 624 754 97260987 97260858 6.750000e-43 185.0
30 TraesCS7B01G410600 chr4D 95.276 1016 41 3 2940 3955 97719484 97720492 0.000000e+00 1604.0
31 TraesCS7B01G410600 chr4D 91.818 330 18 2 1088 1417 97719161 97719481 6.030000e-123 451.0
32 TraesCS7B01G410600 chr1D 88.889 1269 122 14 2698 3955 309577089 309578349 0.000000e+00 1544.0
33 TraesCS7B01G410600 chr1D 89.091 495 40 7 2050 2539 309576611 309577096 1.570000e-168 603.0
34 TraesCS7B01G410600 chr1D 84.824 369 48 7 1856 2220 70599044 70599408 8.080000e-97 364.0
35 TraesCS7B01G410600 chr1D 84.858 317 28 11 2698 3010 70599637 70599937 6.420000e-78 302.0
36 TraesCS7B01G410600 chr1D 87.324 213 21 4 2268 2478 70599400 70599608 5.110000e-59 239.0
37 TraesCS7B01G410600 chr7D 95.811 549 20 3 1623 2169 113754432 113753885 0.000000e+00 883.0
38 TraesCS7B01G410600 chr7D 94.444 126 7 0 965 1090 113755043 113754918 1.120000e-45 195.0
39 TraesCS7B01G410600 chr2B 95.560 518 21 1 1088 1603 139345522 139346039 0.000000e+00 828.0
40 TraesCS7B01G410600 chr2B 91.422 408 29 4 667 1074 139345066 139345467 4.470000e-154 555.0
41 TraesCS7B01G410600 chr3A 91.886 456 31 4 619 1074 674334726 674335175 2.010000e-177 632.0
42 TraesCS7B01G410600 chr3A 93.633 267 15 1 1088 1352 674335230 674335496 7.960000e-107 398.0
43 TraesCS7B01G410600 chr5D 93.636 330 15 1 1088 1417 332220510 332220187 4.590000e-134 488.0
44 TraesCS7B01G410600 chr5D 82.573 482 30 21 623 1090 332220996 332220555 3.730000e-100 375.0
45 TraesCS7B01G410600 chr5D 87.970 133 16 0 2408 2540 499951899 499952031 1.470000e-34 158.0
46 TraesCS7B01G410600 chr1A 88.630 387 31 7 2050 2432 389074434 389074811 3.600000e-125 459.0
47 TraesCS7B01G410600 chr1A 85.286 367 50 4 1856 2220 71092267 71092631 3.730000e-100 375.0
48 TraesCS7B01G410600 chr1A 90.476 105 10 0 2434 2538 389074840 389074944 5.330000e-29 139.0
49 TraesCS7B01G410600 chr6B 82.143 336 34 11 619 952 27172418 27172729 8.430000e-67 265.0
50 TraesCS7B01G410600 chr4A 86.869 198 25 1 756 952 545196714 545196517 1.850000e-53 220.0
51 TraesCS7B01G410600 chrUn 90.741 162 13 1 2542 2703 327155433 327155274 8.610000e-52 215.0
52 TraesCS7B01G410600 chr2A 90.741 162 13 1 2542 2703 750323522 750323681 8.610000e-52 215.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G410600 chr7B 679676365 679680319 3954 True 7304.000000 7304 100.000000 1 3955 1 chr7B.!!$R1 3954
1 TraesCS7B01G410600 chr7B 532148535 532152069 3534 False 1236.250000 2056 94.071000 623 3955 4 chr7B.!!$F1 3332
2 TraesCS7B01G410600 chr7B 69986833 69990373 3540 True 1232.000000 2017 93.827250 622 3955 4 chr7B.!!$R2 3333
3 TraesCS7B01G410600 chr1B 17703244 17704844 1600 True 855.400000 2012 96.191000 1088 3955 3 chr1B.!!$R1 2867
4 TraesCS7B01G410600 chr1B 112207196 112207752 556 False 303.500000 372 86.612000 1858 2478 2 chr1B.!!$F2 620
5 TraesCS7B01G410600 chr5A 387353944 387355901 1957 False 1570.500000 1995 95.466500 1826 3955 2 chr5A.!!$F1 2129
6 TraesCS7B01G410600 chr3B 736663399 736665021 1622 False 1254.500000 1949 93.946000 2159 3955 2 chr3B.!!$F1 1796
7 TraesCS7B01G410600 chr7A 641312184 641314166 1982 False 989.333333 1759 94.704333 622 3955 3 chr7A.!!$F2 3333
8 TraesCS7B01G410600 chr7A 137842377 137843336 959 False 500.500000 614 93.779000 620 1599 2 chr7A.!!$F1 979
9 TraesCS7B01G410600 chr7A 692051498 692052018 520 True 404.000000 431 94.977500 1 622 2 chr7A.!!$R1 621
10 TraesCS7B01G410600 chr6D 453935120 453936983 1863 True 828.000000 1604 90.402000 623 3955 3 chr6D.!!$R2 3332
11 TraesCS7B01G410600 chr4D 97719161 97720492 1331 False 1027.500000 1604 93.547000 1088 3955 2 chr4D.!!$F1 2867
12 TraesCS7B01G410600 chr1D 309576611 309578349 1738 False 1073.500000 1544 88.990000 2050 3955 2 chr1D.!!$F2 1905
13 TraesCS7B01G410600 chr1D 70599044 70599937 893 False 301.666667 364 85.668667 1856 3010 3 chr1D.!!$F1 1154
14 TraesCS7B01G410600 chr7D 113753885 113755043 1158 True 539.000000 883 95.127500 965 2169 2 chr7D.!!$R1 1204
15 TraesCS7B01G410600 chr2B 139345066 139346039 973 False 691.500000 828 93.491000 667 1603 2 chr2B.!!$F1 936
16 TraesCS7B01G410600 chr3A 674334726 674335496 770 False 515.000000 632 92.759500 619 1352 2 chr3A.!!$F1 733
17 TraesCS7B01G410600 chr5D 332220187 332220996 809 True 431.500000 488 88.104500 623 1417 2 chr5D.!!$R1 794
18 TraesCS7B01G410600 chr1A 389074434 389074944 510 False 299.000000 459 89.553000 2050 2538 2 chr1A.!!$F2 488

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
502 504 0.039035 AGGCTGGCCCGAAAAACATA 59.961 50.0 8.11 0.0 39.21 2.29 F
606 608 0.107831 ACGCAATGTGTGTGGGTACT 59.892 50.0 0.00 0.0 39.97 2.73 F
2546 4476 0.179026 CTCATGATGGGGAGCAGTGG 60.179 60.0 0.00 0.0 0.00 4.00 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2446 4376 1.056125 ATGGTGAGATCCCCATCGCA 61.056 55.000 3.86 0.0 36.76 5.10 R
2571 4501 0.386113 TTTGTTTGTACTTGCCCGCC 59.614 50.000 0.00 0.0 0.00 6.13 R
3415 5358 1.126846 CTTTCAACAGATGTCGTCGCC 59.873 52.381 0.00 0.0 0.00 5.54 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
54 55 3.262420 GAATCGTGAAGCTTGCTCCTTA 58.738 45.455 2.10 0.00 0.00 2.69
87 88 9.442047 AGTTCTCATTTACTAGTTCATTTGGAG 57.558 33.333 0.00 0.32 0.00 3.86
208 210 9.520204 CATAAAAGGTGTGGATGAAATAATCAC 57.480 33.333 0.00 0.00 41.93 3.06
216 218 7.064609 GTGTGGATGAAATAATCACGAAGAAGA 59.935 37.037 0.00 0.00 41.93 2.87
217 219 7.770433 TGTGGATGAAATAATCACGAAGAAGAT 59.230 33.333 0.00 0.00 41.93 2.40
218 220 9.261180 GTGGATGAAATAATCACGAAGAAGATA 57.739 33.333 0.00 0.00 41.93 1.98
221 223 9.752274 GATGAAATAATCACGAAGAAGATATGC 57.248 33.333 0.00 0.00 41.93 3.14
222 224 8.893219 TGAAATAATCACGAAGAAGATATGCT 57.107 30.769 0.00 0.00 31.50 3.79
223 225 9.330063 TGAAATAATCACGAAGAAGATATGCTT 57.670 29.630 0.00 0.00 34.24 3.91
228 230 8.893219 AATCACGAAGAAGATATGCTTATCAA 57.107 30.769 18.77 0.00 37.31 2.57
229 231 7.700322 TCACGAAGAAGATATGCTTATCAAC 57.300 36.000 18.77 12.63 37.31 3.18
230 232 7.264947 TCACGAAGAAGATATGCTTATCAACA 58.735 34.615 18.77 0.00 37.31 3.33
231 233 7.436376 TCACGAAGAAGATATGCTTATCAACAG 59.564 37.037 18.77 9.18 37.31 3.16
232 234 7.436376 CACGAAGAAGATATGCTTATCAACAGA 59.564 37.037 18.77 0.00 37.31 3.41
233 235 7.651304 ACGAAGAAGATATGCTTATCAACAGAG 59.349 37.037 18.77 9.98 37.31 3.35
234 236 7.651304 CGAAGAAGATATGCTTATCAACAGAGT 59.349 37.037 18.77 0.00 37.31 3.24
235 237 9.323985 GAAGAAGATATGCTTATCAACAGAGTT 57.676 33.333 18.77 5.39 37.31 3.01
239 241 9.717942 AAGATATGCTTATCAACAGAGTTATCC 57.282 33.333 18.77 0.00 37.31 2.59
240 242 8.874156 AGATATGCTTATCAACAGAGTTATCCA 58.126 33.333 18.77 0.00 37.31 3.41
241 243 9.494271 GATATGCTTATCAACAGAGTTATCCAA 57.506 33.333 13.31 0.00 35.30 3.53
242 244 7.798596 ATGCTTATCAACAGAGTTATCCAAG 57.201 36.000 0.00 0.00 0.00 3.61
243 245 6.946340 TGCTTATCAACAGAGTTATCCAAGA 58.054 36.000 0.00 0.00 0.00 3.02
244 246 7.044181 TGCTTATCAACAGAGTTATCCAAGAG 58.956 38.462 0.00 0.00 0.00 2.85
245 247 6.481644 GCTTATCAACAGAGTTATCCAAGAGG 59.518 42.308 0.00 0.00 0.00 3.69
246 248 7.496346 TTATCAACAGAGTTATCCAAGAGGT 57.504 36.000 0.00 0.00 35.89 3.85
247 249 5.152623 TCAACAGAGTTATCCAAGAGGTG 57.847 43.478 0.00 0.00 35.89 4.00
248 250 4.593206 TCAACAGAGTTATCCAAGAGGTGT 59.407 41.667 0.00 0.00 35.89 4.16
249 251 5.071788 TCAACAGAGTTATCCAAGAGGTGTT 59.928 40.000 0.00 0.00 35.89 3.32
250 252 5.568620 ACAGAGTTATCCAAGAGGTGTTT 57.431 39.130 0.00 0.00 35.89 2.83
251 253 5.941788 ACAGAGTTATCCAAGAGGTGTTTT 58.058 37.500 0.00 0.00 35.89 2.43
252 254 6.365520 ACAGAGTTATCCAAGAGGTGTTTTT 58.634 36.000 0.00 0.00 35.89 1.94
253 255 7.514721 ACAGAGTTATCCAAGAGGTGTTTTTA 58.485 34.615 0.00 0.00 35.89 1.52
254 256 8.164070 ACAGAGTTATCCAAGAGGTGTTTTTAT 58.836 33.333 0.00 0.00 35.89 1.40
255 257 8.454106 CAGAGTTATCCAAGAGGTGTTTTTATG 58.546 37.037 0.00 0.00 35.89 1.90
256 258 7.611855 AGAGTTATCCAAGAGGTGTTTTTATGG 59.388 37.037 0.00 0.00 35.89 2.74
257 259 7.466804 AGTTATCCAAGAGGTGTTTTTATGGA 58.533 34.615 0.00 0.00 39.59 3.41
258 260 7.393515 AGTTATCCAAGAGGTGTTTTTATGGAC 59.606 37.037 0.00 0.00 38.22 4.02
259 261 4.069304 TCCAAGAGGTGTTTTTATGGACG 58.931 43.478 0.00 0.00 35.89 4.79
260 262 3.365969 CCAAGAGGTGTTTTTATGGACGC 60.366 47.826 0.00 0.00 0.00 5.19
261 263 2.073816 AGAGGTGTTTTTATGGACGCG 58.926 47.619 3.53 3.53 0.00 6.01
262 264 0.519961 AGGTGTTTTTATGGACGCGC 59.480 50.000 5.73 0.00 0.00 6.86
263 265 0.791610 GGTGTTTTTATGGACGCGCG 60.792 55.000 30.96 30.96 0.00 6.86
264 266 0.164217 GTGTTTTTATGGACGCGCGA 59.836 50.000 39.36 15.84 0.00 5.87
265 267 0.866427 TGTTTTTATGGACGCGCGAA 59.134 45.000 39.36 21.69 0.00 4.70
266 268 1.465387 TGTTTTTATGGACGCGCGAAT 59.535 42.857 39.36 26.57 0.00 3.34
267 269 1.837747 GTTTTTATGGACGCGCGAATG 59.162 47.619 39.36 7.85 0.00 2.67
268 270 0.375454 TTTTATGGACGCGCGAATGG 59.625 50.000 39.36 7.37 0.00 3.16
269 271 1.433053 TTTATGGACGCGCGAATGGG 61.433 55.000 39.36 6.47 0.00 4.00
283 285 2.530277 TGGGCTCCCATGGCAAAA 59.470 55.556 6.09 0.00 41.89 2.44
284 286 1.152161 TGGGCTCCCATGGCAAAAA 60.152 52.632 6.09 0.00 41.89 1.94
285 287 1.193462 TGGGCTCCCATGGCAAAAAG 61.193 55.000 6.09 0.00 41.89 2.27
286 288 1.598517 GGCTCCCATGGCAAAAAGG 59.401 57.895 6.09 0.00 0.00 3.11
287 289 0.904394 GGCTCCCATGGCAAAAAGGA 60.904 55.000 6.09 0.00 0.00 3.36
288 290 0.533951 GCTCCCATGGCAAAAAGGAG 59.466 55.000 6.09 16.67 45.74 3.69
289 291 0.533951 CTCCCATGGCAAAAAGGAGC 59.466 55.000 6.09 0.00 37.88 4.70
297 299 1.332195 GCAAAAAGGAGCCAAGAGGT 58.668 50.000 0.00 0.00 37.19 3.85
298 300 1.000171 GCAAAAAGGAGCCAAGAGGTG 60.000 52.381 0.00 0.00 37.19 4.00
299 301 2.310538 CAAAAAGGAGCCAAGAGGTGT 58.689 47.619 0.00 0.00 37.19 4.16
300 302 2.695147 CAAAAAGGAGCCAAGAGGTGTT 59.305 45.455 0.00 0.00 37.19 3.32
301 303 2.755952 AAAGGAGCCAAGAGGTGTTT 57.244 45.000 0.00 0.00 37.19 2.83
302 304 2.278332 AAGGAGCCAAGAGGTGTTTC 57.722 50.000 0.00 0.00 37.19 2.78
303 305 1.439543 AGGAGCCAAGAGGTGTTTCT 58.560 50.000 0.00 0.00 37.19 2.52
304 306 1.777272 AGGAGCCAAGAGGTGTTTCTT 59.223 47.619 0.00 0.00 37.90 2.52
305 307 2.175715 AGGAGCCAAGAGGTGTTTCTTT 59.824 45.455 0.00 0.00 35.28 2.52
306 308 2.554462 GGAGCCAAGAGGTGTTTCTTTC 59.446 50.000 0.00 0.00 35.28 2.62
307 309 3.214328 GAGCCAAGAGGTGTTTCTTTCA 58.786 45.455 0.00 0.00 35.28 2.69
308 310 3.631250 AGCCAAGAGGTGTTTCTTTCAA 58.369 40.909 0.00 0.00 35.28 2.69
309 311 3.633986 AGCCAAGAGGTGTTTCTTTCAAG 59.366 43.478 0.00 0.00 35.28 3.02
318 320 3.130340 GTGTTTCTTTCAAGTGGCTTGGA 59.870 43.478 8.74 0.00 41.33 3.53
448 450 4.164221 GGGATGGATGAGACTTTGGAAGTA 59.836 45.833 0.00 0.00 43.03 2.24
449 451 5.163152 GGGATGGATGAGACTTTGGAAGTAT 60.163 44.000 0.00 0.00 43.03 2.12
450 452 6.043243 GGGATGGATGAGACTTTGGAAGTATA 59.957 42.308 0.00 0.00 43.03 1.47
451 453 7.420214 GGGATGGATGAGACTTTGGAAGTATAA 60.420 40.741 0.00 0.00 43.03 0.98
452 454 7.993183 GGATGGATGAGACTTTGGAAGTATAAA 59.007 37.037 0.00 0.00 43.03 1.40
453 455 9.396022 GATGGATGAGACTTTGGAAGTATAAAA 57.604 33.333 0.00 0.00 43.03 1.52
454 456 9.927081 ATGGATGAGACTTTGGAAGTATAAAAT 57.073 29.630 0.00 0.00 43.03 1.82
459 461 9.667107 TGAGACTTTGGAAGTATAAAATACTGG 57.333 33.333 0.51 0.00 43.03 4.00
460 462 9.110502 GAGACTTTGGAAGTATAAAATACTGGG 57.889 37.037 0.51 0.00 43.03 4.45
461 463 8.053355 AGACTTTGGAAGTATAAAATACTGGGG 58.947 37.037 0.51 0.00 43.03 4.96
462 464 7.935405 ACTTTGGAAGTATAAAATACTGGGGA 58.065 34.615 0.51 0.00 40.69 4.81
463 465 8.395605 ACTTTGGAAGTATAAAATACTGGGGAA 58.604 33.333 0.51 0.00 40.69 3.97
464 466 9.250246 CTTTGGAAGTATAAAATACTGGGGAAA 57.750 33.333 0.51 0.00 0.00 3.13
465 467 9.603189 TTTGGAAGTATAAAATACTGGGGAAAA 57.397 29.630 0.51 0.00 0.00 2.29
466 468 9.777008 TTGGAAGTATAAAATACTGGGGAAAAT 57.223 29.630 0.51 0.00 0.00 1.82
467 469 9.777008 TGGAAGTATAAAATACTGGGGAAAATT 57.223 29.630 0.51 0.00 0.00 1.82
481 483 9.889128 ACTGGGGAAAATTGTAATTTTATCATG 57.111 29.630 13.55 8.32 45.70 3.07
482 484 9.328845 CTGGGGAAAATTGTAATTTTATCATGG 57.671 33.333 13.55 2.73 45.70 3.66
483 485 9.051259 TGGGGAAAATTGTAATTTTATCATGGA 57.949 29.630 13.55 0.00 45.70 3.41
484 486 9.546428 GGGGAAAATTGTAATTTTATCATGGAG 57.454 33.333 13.55 0.00 45.70 3.86
485 487 9.546428 GGGAAAATTGTAATTTTATCATGGAGG 57.454 33.333 13.55 0.00 45.70 4.30
486 488 9.045223 GGAAAATTGTAATTTTATCATGGAGGC 57.955 33.333 13.55 0.77 45.70 4.70
487 489 9.822185 GAAAATTGTAATTTTATCATGGAGGCT 57.178 29.630 13.55 0.00 45.70 4.58
488 490 9.603921 AAAATTGTAATTTTATCATGGAGGCTG 57.396 29.630 12.28 0.00 44.36 4.85
489 491 6.713762 TTGTAATTTTATCATGGAGGCTGG 57.286 37.500 0.00 0.00 0.00 4.85
490 492 4.584325 TGTAATTTTATCATGGAGGCTGGC 59.416 41.667 0.00 0.00 0.00 4.85
491 493 2.071778 TTTTATCATGGAGGCTGGCC 57.928 50.000 3.00 3.00 0.00 5.36
492 494 0.185901 TTTATCATGGAGGCTGGCCC 59.814 55.000 8.11 0.00 36.58 5.80
493 495 2.055689 TTATCATGGAGGCTGGCCCG 62.056 60.000 8.11 0.00 39.21 6.13
494 496 2.963391 TATCATGGAGGCTGGCCCGA 62.963 60.000 8.11 0.00 39.21 5.14
495 497 4.113815 CATGGAGGCTGGCCCGAA 62.114 66.667 8.11 0.00 39.21 4.30
496 498 3.338250 ATGGAGGCTGGCCCGAAA 61.338 61.111 8.11 0.00 39.21 3.46
497 499 2.917897 ATGGAGGCTGGCCCGAAAA 61.918 57.895 8.11 0.00 39.21 2.29
498 500 2.282887 GGAGGCTGGCCCGAAAAA 60.283 61.111 8.11 0.00 39.21 1.94
499 501 2.636412 GGAGGCTGGCCCGAAAAAC 61.636 63.158 8.11 0.00 39.21 2.43
500 502 1.901464 GAGGCTGGCCCGAAAAACA 60.901 57.895 8.11 0.00 39.21 2.83
501 503 1.228862 AGGCTGGCCCGAAAAACAT 60.229 52.632 8.11 0.00 39.21 2.71
502 504 0.039035 AGGCTGGCCCGAAAAACATA 59.961 50.000 8.11 0.00 39.21 2.29
503 505 0.455815 GGCTGGCCCGAAAAACATAG 59.544 55.000 0.00 0.00 0.00 2.23
504 506 1.459450 GCTGGCCCGAAAAACATAGA 58.541 50.000 0.00 0.00 0.00 1.98
505 507 1.816224 GCTGGCCCGAAAAACATAGAA 59.184 47.619 0.00 0.00 0.00 2.10
506 508 2.230266 GCTGGCCCGAAAAACATAGAAA 59.770 45.455 0.00 0.00 0.00 2.52
507 509 3.119137 GCTGGCCCGAAAAACATAGAAAT 60.119 43.478 0.00 0.00 0.00 2.17
508 510 4.097286 GCTGGCCCGAAAAACATAGAAATA 59.903 41.667 0.00 0.00 0.00 1.40
509 511 5.570234 TGGCCCGAAAAACATAGAAATAC 57.430 39.130 0.00 0.00 0.00 1.89
510 512 5.258051 TGGCCCGAAAAACATAGAAATACT 58.742 37.500 0.00 0.00 0.00 2.12
511 513 5.124776 TGGCCCGAAAAACATAGAAATACTG 59.875 40.000 0.00 0.00 0.00 2.74
512 514 5.034797 GCCCGAAAAACATAGAAATACTGC 58.965 41.667 0.00 0.00 0.00 4.40
513 515 5.163652 GCCCGAAAAACATAGAAATACTGCT 60.164 40.000 0.00 0.00 0.00 4.24
514 516 6.037830 GCCCGAAAAACATAGAAATACTGCTA 59.962 38.462 0.00 0.00 0.00 3.49
515 517 7.407337 CCCGAAAAACATAGAAATACTGCTAC 58.593 38.462 0.00 0.00 0.00 3.58
516 518 7.065324 CCCGAAAAACATAGAAATACTGCTACA 59.935 37.037 0.00 0.00 0.00 2.74
517 519 8.447833 CCGAAAAACATAGAAATACTGCTACAA 58.552 33.333 0.00 0.00 0.00 2.41
518 520 9.820229 CGAAAAACATAGAAATACTGCTACAAA 57.180 29.630 0.00 0.00 0.00 2.83
528 530 9.507329 AGAAATACTGCTACAAAATCAAAGAGA 57.493 29.630 0.00 0.00 0.00 3.10
533 535 7.945134 ACTGCTACAAAATCAAAGAGAATTGT 58.055 30.769 0.00 0.00 40.90 2.71
534 536 9.066892 ACTGCTACAAAATCAAAGAGAATTGTA 57.933 29.630 0.00 0.00 39.54 2.41
535 537 9.897744 CTGCTACAAAATCAAAGAGAATTGTAA 57.102 29.630 0.00 0.00 39.76 2.41
549 551 9.745018 AAGAGAATTGTAATTTTCTCATGGAGA 57.255 29.630 16.27 0.00 46.66 3.71
550 552 9.917887 AGAGAATTGTAATTTTCTCATGGAGAT 57.082 29.630 16.27 0.00 46.66 2.75
551 553 9.947669 GAGAATTGTAATTTTCTCATGGAGATG 57.052 33.333 11.18 0.00 44.65 2.90
552 554 9.690913 AGAATTGTAATTTTCTCATGGAGATGA 57.309 29.630 0.00 0.00 38.56 2.92
557 559 9.246670 TGTAATTTTCTCATGGAGATGATTTGT 57.753 29.630 0.00 0.00 38.56 2.83
558 560 9.512435 GTAATTTTCTCATGGAGATGATTTGTG 57.488 33.333 0.00 0.00 38.56 3.33
559 561 7.949690 ATTTTCTCATGGAGATGATTTGTGA 57.050 32.000 0.00 0.00 38.56 3.58
560 562 7.764141 TTTTCTCATGGAGATGATTTGTGAA 57.236 32.000 0.00 0.00 38.56 3.18
561 563 6.997239 TTCTCATGGAGATGATTTGTGAAG 57.003 37.500 0.00 0.00 38.56 3.02
562 564 6.303903 TCTCATGGAGATGATTTGTGAAGA 57.696 37.500 0.00 0.00 37.97 2.87
563 565 6.111382 TCTCATGGAGATGATTTGTGAAGAC 58.889 40.000 0.00 0.00 37.97 3.01
564 566 5.807909 TCATGGAGATGATTTGTGAAGACA 58.192 37.500 0.00 0.00 33.40 3.41
565 567 6.420638 TCATGGAGATGATTTGTGAAGACAT 58.579 36.000 0.00 0.00 33.40 3.06
566 568 6.888088 TCATGGAGATGATTTGTGAAGACATT 59.112 34.615 0.00 0.00 33.40 2.71
567 569 6.748333 TGGAGATGATTTGTGAAGACATTC 57.252 37.500 0.00 0.00 35.87 2.67
568 570 6.479006 TGGAGATGATTTGTGAAGACATTCT 58.521 36.000 0.00 0.00 36.33 2.40
569 571 6.944290 TGGAGATGATTTGTGAAGACATTCTT 59.056 34.615 0.00 0.00 39.87 2.52
570 572 7.449395 TGGAGATGATTTGTGAAGACATTCTTT 59.551 33.333 0.00 0.00 36.73 2.52
571 573 8.302438 GGAGATGATTTGTGAAGACATTCTTTT 58.698 33.333 0.00 0.00 36.73 2.27
572 574 9.688592 GAGATGATTTGTGAAGACATTCTTTTT 57.311 29.630 0.00 0.00 36.73 1.94
595 597 6.751514 TTTGGAGTATCAATTACGCAATGT 57.248 33.333 0.00 0.00 36.25 2.71
596 598 5.733226 TGGAGTATCAATTACGCAATGTG 57.267 39.130 0.00 0.00 36.25 3.21
597 599 5.182487 TGGAGTATCAATTACGCAATGTGT 58.818 37.500 4.41 4.41 36.25 3.72
598 600 5.064579 TGGAGTATCAATTACGCAATGTGTG 59.935 40.000 10.01 0.00 36.25 3.82
599 601 5.064707 GGAGTATCAATTACGCAATGTGTGT 59.935 40.000 10.01 4.05 40.19 3.72
600 602 5.868257 AGTATCAATTACGCAATGTGTGTG 58.132 37.500 10.01 5.36 41.73 3.82
601 603 3.550950 TCAATTACGCAATGTGTGTGG 57.449 42.857 10.01 0.00 41.73 4.17
602 604 2.227626 TCAATTACGCAATGTGTGTGGG 59.772 45.455 10.01 0.00 41.73 4.61
603 605 1.904287 ATTACGCAATGTGTGTGGGT 58.096 45.000 10.01 0.00 41.73 4.51
604 606 2.545537 TTACGCAATGTGTGTGGGTA 57.454 45.000 10.01 0.00 41.73 3.69
605 607 1.798283 TACGCAATGTGTGTGGGTAC 58.202 50.000 10.01 0.00 41.73 3.34
606 608 0.107831 ACGCAATGTGTGTGGGTACT 59.892 50.000 0.00 0.00 39.97 2.73
607 609 0.516877 CGCAATGTGTGTGGGTACTG 59.483 55.000 0.00 0.00 33.83 2.74
608 610 0.881118 GCAATGTGTGTGGGTACTGG 59.119 55.000 0.00 0.00 0.00 4.00
609 611 1.817740 GCAATGTGTGTGGGTACTGGT 60.818 52.381 0.00 0.00 0.00 4.00
610 612 2.551287 GCAATGTGTGTGGGTACTGGTA 60.551 50.000 0.00 0.00 0.00 3.25
611 613 3.334691 CAATGTGTGTGGGTACTGGTAG 58.665 50.000 0.00 0.00 0.00 3.18
612 614 0.682852 TGTGTGTGGGTACTGGTAGC 59.317 55.000 1.80 1.80 0.00 3.58
681 683 1.341187 CCCCGGGTAGCCAAAATTACA 60.341 52.381 21.85 0.00 0.00 2.41
740 743 3.388676 CCAATACATGTGGGGATTTGCAT 59.611 43.478 9.11 0.00 32.03 3.96
748 751 2.492773 GGGATTTGCATGGGAGGCG 61.493 63.158 0.00 0.00 0.00 5.52
772 775 2.425592 CCCAGTTGCAGTCCACGA 59.574 61.111 0.00 0.00 0.00 4.35
773 776 1.003355 CCCAGTTGCAGTCCACGAT 60.003 57.895 0.00 0.00 0.00 3.73
817 825 0.460284 CCCAATCCTTCGACCTCGTG 60.460 60.000 0.00 0.00 40.80 4.35
945 1003 2.720134 GCCGAAGAGCTCTGCCTCT 61.720 63.158 19.06 0.00 43.81 3.69
1100 1213 5.121380 ACCTCATGCAAATAGTCCAATCT 57.879 39.130 0.00 0.00 0.00 2.40
1267 1384 7.500227 CACCATCTAATGAATTTCAAGCTCCTA 59.500 37.037 2.68 0.00 0.00 2.94
1277 1394 7.613022 TGAATTTCAAGCTCCTATTCATGTTCT 59.387 33.333 0.00 0.00 32.10 3.01
1342 1459 7.080353 TCAGATGCAAACATTGTAGAAGATG 57.920 36.000 0.00 0.00 36.35 2.90
1372 1489 5.525378 CCTGAACCTGAAGTGTATAATGAGC 59.475 44.000 0.00 0.00 0.00 4.26
1467 1584 5.890424 TCCGGAAACAAATTGGAGATTAC 57.110 39.130 0.00 0.00 0.00 1.89
1502 1619 0.690411 AGAGATGCAGTGAGGAGGGG 60.690 60.000 0.00 0.00 0.00 4.79
1527 1644 5.972107 ATTTGAAGAAAGGTCCATGTCAG 57.028 39.130 0.00 0.00 0.00 3.51
1549 1666 2.554032 CCGTATGGGCATGATTTTCCTC 59.446 50.000 0.00 0.00 0.00 3.71
1551 1668 2.734755 ATGGGCATGATTTTCCTCGA 57.265 45.000 0.00 0.00 0.00 4.04
1566 1683 7.647907 TTTTCCTCGAAACACTACAGATAAC 57.352 36.000 0.00 0.00 30.83 1.89
1579 1696 7.068839 ACACTACAGATAACAGGGTATTCAGAG 59.931 40.741 0.00 0.00 0.00 3.35
1614 1731 4.745649 ACGAGTTTGATTGGCTAGAGTAC 58.254 43.478 0.00 0.00 0.00 2.73
1639 2099 9.797556 ACAGTGTAAAAGAAAACAAGGTAATTC 57.202 29.630 0.00 0.00 0.00 2.17
1684 2144 5.674525 TGCTATAAGATGCAAAGCTACAGT 58.325 37.500 0.00 0.00 36.15 3.55
1689 2149 5.557891 AAGATGCAAAGCTACAGTTGATC 57.442 39.130 0.00 1.58 0.00 2.92
1819 2279 3.459232 TGGGCATAGTCATTTCTCTCG 57.541 47.619 0.00 0.00 0.00 4.04
1846 2306 3.531934 TGATGAGTCTCGTGATGCATT 57.468 42.857 0.00 0.00 0.00 3.56
1942 2402 3.187227 GTCAAGCATGTAGTGAACACCAG 59.813 47.826 1.11 0.00 42.09 4.00
2312 4242 4.808558 TGCAATGCTTTGATTTGTAGGTC 58.191 39.130 15.97 0.00 34.60 3.85
2317 4247 4.460263 TGCTTTGATTTGTAGGTCAGTGT 58.540 39.130 0.00 0.00 0.00 3.55
2321 4251 5.666969 TTGATTTGTAGGTCAGTGTTTCG 57.333 39.130 0.00 0.00 0.00 3.46
2333 4263 6.149807 AGGTCAGTGTTTCGTGTAAAAGAAAA 59.850 34.615 0.00 0.00 37.98 2.29
2384 4314 7.713764 AAAGATTGTGTGGCAATTAGAAAAC 57.286 32.000 0.00 0.00 46.90 2.43
2394 4324 4.202020 GGCAATTAGAAAACGGGGAGATTC 60.202 45.833 0.00 0.00 0.00 2.52
2438 4368 4.965200 AGAGACAACTTTAGCAAGACCT 57.035 40.909 0.00 0.00 33.72 3.85
2446 4376 5.700402 ACTTTAGCAAGACCTGGTGATAT 57.300 39.130 2.82 0.00 36.95 1.63
2478 4408 6.302269 GGATCTCACCATAGGACATTGATTT 58.698 40.000 0.00 0.00 0.00 2.17
2484 4414 5.025453 ACCATAGGACATTGATTTGGCTTT 58.975 37.500 0.00 0.00 0.00 3.51
2495 4425 8.095792 ACATTGATTTGGCTTTATCAAATGTGA 58.904 29.630 6.75 0.00 42.68 3.58
2540 4470 4.362470 TGCTATTTCTCATGATGGGGAG 57.638 45.455 0.00 0.00 0.00 4.30
2541 4471 3.080319 GCTATTTCTCATGATGGGGAGC 58.920 50.000 0.00 0.00 0.00 4.70
2542 4472 3.497405 GCTATTTCTCATGATGGGGAGCA 60.497 47.826 11.92 0.00 0.00 4.26
2543 4473 2.723322 TTTCTCATGATGGGGAGCAG 57.277 50.000 0.00 0.00 0.00 4.24
2544 4474 1.588239 TTCTCATGATGGGGAGCAGT 58.412 50.000 0.00 0.00 0.00 4.40
2545 4475 0.835276 TCTCATGATGGGGAGCAGTG 59.165 55.000 0.00 0.00 0.00 3.66
2546 4476 0.179026 CTCATGATGGGGAGCAGTGG 60.179 60.000 0.00 0.00 0.00 4.00
2547 4477 1.826921 CATGATGGGGAGCAGTGGC 60.827 63.158 0.00 0.00 41.61 5.01
2564 4494 4.760047 CGGACCGCCACTTCAGGG 62.760 72.222 0.00 0.00 0.00 4.45
2565 4495 3.319198 GGACCGCCACTTCAGGGA 61.319 66.667 0.00 0.00 0.00 4.20
2566 4496 2.747686 GACCGCCACTTCAGGGAA 59.252 61.111 0.00 0.00 0.00 3.97
2567 4497 1.072505 GACCGCCACTTCAGGGAAA 59.927 57.895 0.00 0.00 0.00 3.13
2568 4498 1.228154 ACCGCCACTTCAGGGAAAC 60.228 57.895 0.00 0.00 0.00 2.78
2569 4499 1.073199 CCGCCACTTCAGGGAAACT 59.927 57.895 0.00 0.00 0.00 2.66
2579 4509 4.986708 GGGAAACTGGGCGGGCAA 62.987 66.667 3.27 0.00 0.00 4.52
2580 4510 3.373565 GGAAACTGGGCGGGCAAG 61.374 66.667 4.09 4.09 0.00 4.01
2581 4511 2.597510 GAAACTGGGCGGGCAAGT 60.598 61.111 5.64 5.64 0.00 3.16
2582 4512 1.302993 GAAACTGGGCGGGCAAGTA 60.303 57.895 12.49 0.00 0.00 2.24
2583 4513 1.583495 GAAACTGGGCGGGCAAGTAC 61.583 60.000 12.49 6.27 0.00 2.73
2584 4514 2.346284 AAACTGGGCGGGCAAGTACA 62.346 55.000 12.49 0.00 0.00 2.90
2585 4515 2.033448 CTGGGCGGGCAAGTACAA 59.967 61.111 3.27 0.00 0.00 2.41
2586 4516 1.602323 CTGGGCGGGCAAGTACAAA 60.602 57.895 3.27 0.00 0.00 2.83
2587 4517 1.862602 CTGGGCGGGCAAGTACAAAC 61.863 60.000 3.27 0.00 0.00 2.93
2588 4518 1.899534 GGGCGGGCAAGTACAAACA 60.900 57.895 3.27 0.00 0.00 2.83
2589 4519 1.457009 GGGCGGGCAAGTACAAACAA 61.457 55.000 3.27 0.00 0.00 2.83
2590 4520 0.386113 GGCGGGCAAGTACAAACAAA 59.614 50.000 0.00 0.00 0.00 2.83
2591 4521 1.601914 GGCGGGCAAGTACAAACAAAG 60.602 52.381 0.00 0.00 0.00 2.77
2592 4522 1.766069 CGGGCAAGTACAAACAAAGC 58.234 50.000 0.00 0.00 0.00 3.51
2593 4523 1.601914 CGGGCAAGTACAAACAAAGCC 60.602 52.381 0.00 0.00 37.95 4.35
2594 4524 1.270094 GGGCAAGTACAAACAAAGCCC 60.270 52.381 3.58 3.58 45.64 5.19
2595 4525 1.410882 GGCAAGTACAAACAAAGCCCA 59.589 47.619 0.00 0.00 34.72 5.36
2596 4526 2.037121 GGCAAGTACAAACAAAGCCCAT 59.963 45.455 0.00 0.00 34.72 4.00
2597 4527 3.494223 GGCAAGTACAAACAAAGCCCATT 60.494 43.478 0.00 0.00 34.72 3.16
2598 4528 4.262249 GGCAAGTACAAACAAAGCCCATTA 60.262 41.667 0.00 0.00 34.72 1.90
2599 4529 4.923281 GCAAGTACAAACAAAGCCCATTAG 59.077 41.667 0.00 0.00 0.00 1.73
2600 4530 5.508994 GCAAGTACAAACAAAGCCCATTAGT 60.509 40.000 0.00 0.00 0.00 2.24
2601 4531 6.512297 CAAGTACAAACAAAGCCCATTAGTT 58.488 36.000 0.00 0.00 0.00 2.24
2602 4532 6.724893 AGTACAAACAAAGCCCATTAGTTT 57.275 33.333 0.00 0.00 33.09 2.66
2603 4533 7.119709 AGTACAAACAAAGCCCATTAGTTTT 57.880 32.000 0.00 0.00 30.68 2.43
2604 4534 6.983890 AGTACAAACAAAGCCCATTAGTTTTG 59.016 34.615 0.00 0.00 36.77 2.44
2605 4535 4.574421 ACAAACAAAGCCCATTAGTTTTGC 59.426 37.500 1.46 0.00 34.69 3.68
2606 4536 3.401033 ACAAAGCCCATTAGTTTTGCC 57.599 42.857 1.46 0.00 34.69 4.52
2607 4537 2.038426 ACAAAGCCCATTAGTTTTGCCC 59.962 45.455 1.46 0.00 34.69 5.36
2608 4538 2.302733 CAAAGCCCATTAGTTTTGCCCT 59.697 45.455 0.00 0.00 0.00 5.19
2609 4539 1.852633 AGCCCATTAGTTTTGCCCTC 58.147 50.000 0.00 0.00 0.00 4.30
2610 4540 1.077005 AGCCCATTAGTTTTGCCCTCA 59.923 47.619 0.00 0.00 0.00 3.86
2611 4541 1.899142 GCCCATTAGTTTTGCCCTCAA 59.101 47.619 0.00 0.00 0.00 3.02
2612 4542 2.094026 GCCCATTAGTTTTGCCCTCAAG 60.094 50.000 0.00 0.00 33.12 3.02
2613 4543 2.497273 CCCATTAGTTTTGCCCTCAAGG 59.503 50.000 0.00 0.00 39.47 3.61
2624 4554 1.807814 CCCTCAAGGCCCAGTATACT 58.192 55.000 0.00 0.00 0.00 2.12
2625 4555 1.694696 CCCTCAAGGCCCAGTATACTC 59.305 57.143 1.26 0.00 0.00 2.59
2626 4556 2.683768 CCTCAAGGCCCAGTATACTCT 58.316 52.381 1.26 0.00 0.00 3.24
2627 4557 2.630580 CCTCAAGGCCCAGTATACTCTC 59.369 54.545 1.26 0.00 0.00 3.20
2628 4558 3.300388 CTCAAGGCCCAGTATACTCTCA 58.700 50.000 1.26 0.00 0.00 3.27
2629 4559 3.300388 TCAAGGCCCAGTATACTCTCAG 58.700 50.000 1.26 0.00 0.00 3.35
2630 4560 1.710816 AGGCCCAGTATACTCTCAGC 58.289 55.000 1.26 3.60 0.00 4.26
2631 4561 0.315568 GGCCCAGTATACTCTCAGCG 59.684 60.000 1.26 0.00 0.00 5.18
2632 4562 0.319125 GCCCAGTATACTCTCAGCGC 60.319 60.000 1.26 0.00 0.00 5.92
2633 4563 1.323412 CCCAGTATACTCTCAGCGCT 58.677 55.000 2.64 2.64 0.00 5.92
2634 4564 1.268352 CCCAGTATACTCTCAGCGCTC 59.732 57.143 7.13 0.00 0.00 5.03
2635 4565 1.268352 CCAGTATACTCTCAGCGCTCC 59.732 57.143 7.13 0.00 0.00 4.70
2636 4566 1.950216 CAGTATACTCTCAGCGCTCCA 59.050 52.381 7.13 0.00 0.00 3.86
2637 4567 1.950909 AGTATACTCTCAGCGCTCCAC 59.049 52.381 7.13 0.00 0.00 4.02
2638 4568 1.950909 GTATACTCTCAGCGCTCCACT 59.049 52.381 7.13 0.00 0.00 4.00
2639 4569 0.743688 ATACTCTCAGCGCTCCACTG 59.256 55.000 7.13 0.00 36.44 3.66
2640 4570 0.609406 TACTCTCAGCGCTCCACTGT 60.609 55.000 7.13 5.86 36.50 3.55
2641 4571 0.609406 ACTCTCAGCGCTCCACTGTA 60.609 55.000 7.13 0.00 36.50 2.74
2642 4572 0.743688 CTCTCAGCGCTCCACTGTAT 59.256 55.000 7.13 0.00 36.50 2.29
2643 4573 1.135915 CTCTCAGCGCTCCACTGTATT 59.864 52.381 7.13 0.00 36.50 1.89
2644 4574 1.550524 TCTCAGCGCTCCACTGTATTT 59.449 47.619 7.13 0.00 36.50 1.40
2645 4575 2.758423 TCTCAGCGCTCCACTGTATTTA 59.242 45.455 7.13 0.00 36.50 1.40
2646 4576 2.860735 CTCAGCGCTCCACTGTATTTAC 59.139 50.000 7.13 0.00 36.50 2.01
2647 4577 2.496070 TCAGCGCTCCACTGTATTTACT 59.504 45.455 7.13 0.00 36.50 2.24
2648 4578 2.604914 CAGCGCTCCACTGTATTTACTG 59.395 50.000 7.13 0.00 0.00 2.74
2649 4579 2.233922 AGCGCTCCACTGTATTTACTGT 59.766 45.455 2.64 0.00 38.64 3.55
2656 4586 3.009723 CACTGTATTTACTGTGGGCTGG 58.990 50.000 15.88 0.00 46.12 4.85
2657 4587 2.026262 ACTGTATTTACTGTGGGCTGGG 60.026 50.000 0.15 0.00 37.06 4.45
2658 4588 1.340600 TGTATTTACTGTGGGCTGGGC 60.341 52.381 0.00 0.00 0.00 5.36
2659 4589 0.107410 TATTTACTGTGGGCTGGGCG 60.107 55.000 0.00 0.00 0.00 6.13
2660 4590 2.837031 ATTTACTGTGGGCTGGGCGG 62.837 60.000 0.00 0.00 0.00 6.13
2678 4608 3.470433 GCCATGGCCTGTTTTGGT 58.530 55.556 27.24 0.00 34.56 3.67
2679 4609 2.664825 GCCATGGCCTGTTTTGGTA 58.335 52.632 27.24 0.00 34.56 3.25
2680 4610 0.972883 GCCATGGCCTGTTTTGGTAA 59.027 50.000 27.24 0.00 34.56 2.85
2681 4611 1.337728 GCCATGGCCTGTTTTGGTAAC 60.338 52.381 27.24 0.00 34.56 2.50
2682 4612 3.925569 GCCATGGCCTGTTTTGGTAACA 61.926 50.000 27.24 0.00 39.44 2.41
2683 4613 5.962345 GCCATGGCCTGTTTTGGTAACAC 62.962 52.174 27.24 0.00 40.55 3.32
2693 4623 1.213537 TGGTAACACGTAGCTCCGC 59.786 57.895 0.00 0.00 46.17 5.54
2694 4624 1.517913 GGTAACACGTAGCTCCGCC 60.518 63.158 0.00 0.00 0.00 6.13
2695 4625 1.213537 GTAACACGTAGCTCCGCCA 59.786 57.895 0.00 0.00 0.00 5.69
2696 4626 0.801067 GTAACACGTAGCTCCGCCAG 60.801 60.000 0.00 0.00 0.00 4.85
2697 4627 1.246056 TAACACGTAGCTCCGCCAGT 61.246 55.000 0.00 0.00 0.00 4.00
2698 4628 2.507102 CACGTAGCTCCGCCAGTG 60.507 66.667 0.00 0.00 0.00 3.66
2699 4629 2.675423 ACGTAGCTCCGCCAGTGA 60.675 61.111 0.00 0.00 0.00 3.41
2700 4630 2.052690 ACGTAGCTCCGCCAGTGAT 61.053 57.895 0.00 0.00 0.00 3.06
2701 4631 1.589993 CGTAGCTCCGCCAGTGATG 60.590 63.158 0.00 0.00 0.00 3.07
2702 4632 1.227380 GTAGCTCCGCCAGTGATGG 60.227 63.158 0.00 0.00 0.00 3.51
2703 4633 2.434843 TAGCTCCGCCAGTGATGGG 61.435 63.158 0.00 0.00 0.00 4.00
2704 4634 4.864334 GCTCCGCCAGTGATGGGG 62.864 72.222 4.46 4.46 41.04 4.96
2705 4635 3.083349 CTCCGCCAGTGATGGGGA 61.083 66.667 12.46 8.25 43.67 4.81
2715 4645 2.427753 GATGGGGAGGATGCGGAC 59.572 66.667 0.00 0.00 0.00 4.79
2734 4664 3.198068 GACGATAGAGGCAAAGCATCAA 58.802 45.455 6.43 0.00 42.11 2.57
2898 4836 8.865001 GTGTCTGTTAAAAGTTTATTGCAACAA 58.135 29.630 0.00 0.00 0.00 2.83
2954 4893 4.403453 GCTGCCACTTCGTTTTGTATTAG 58.597 43.478 0.00 0.00 0.00 1.73
3080 5019 8.514594 TGAAATATTCAATGAGGTTCTTGACAC 58.485 33.333 0.00 0.00 36.59 3.67
3168 5107 7.549488 GCTAGTCTAGATCCTAGAGACTCATTC 59.451 44.444 17.47 5.63 45.33 2.67
3216 5155 3.969899 TGAGCTTGCATCTATGTACTCG 58.030 45.455 0.00 0.00 0.00 4.18
3275 5218 6.484364 TGGTCAGCTCAAGATATACATTGA 57.516 37.500 0.00 2.43 34.41 2.57
3276 5219 7.071069 TGGTCAGCTCAAGATATACATTGAT 57.929 36.000 2.75 0.00 35.04 2.57
3277 5220 8.193953 TGGTCAGCTCAAGATATACATTGATA 57.806 34.615 2.75 0.00 35.04 2.15
3278 5221 8.819845 TGGTCAGCTCAAGATATACATTGATAT 58.180 33.333 2.75 0.00 35.04 1.63
3338 5281 2.380660 GTCTCGCTAATCTTGCTCTCG 58.619 52.381 0.00 0.00 0.00 4.04
3357 5300 3.735591 TCGAGTTGGTTGAAACTAAGGG 58.264 45.455 0.00 0.00 40.48 3.95
3362 5305 6.195600 AGTTGGTTGAAACTAAGGGACATA 57.804 37.500 0.00 0.00 38.62 2.29
3370 5313 8.880750 GTTGAAACTAAGGGACATATACACTTC 58.119 37.037 0.74 0.00 32.94 3.01
3415 5358 2.159198 ACTTGCTTTGACTTTGCCAGTG 60.159 45.455 0.00 0.00 35.01 3.66
3506 5465 9.451002 AGATATCTGATGATTGGTTGAATGATC 57.549 33.333 3.89 0.00 35.75 2.92
3509 5468 6.655930 TCTGATGATTGGTTGAATGATCTGA 58.344 36.000 0.00 0.00 39.01 3.27
3510 5469 7.287810 TCTGATGATTGGTTGAATGATCTGAT 58.712 34.615 0.00 0.00 37.56 2.90
3511 5470 7.228706 TCTGATGATTGGTTGAATGATCTGATG 59.771 37.037 0.00 0.00 37.56 3.07
3512 5471 7.057894 TGATGATTGGTTGAATGATCTGATGA 58.942 34.615 0.00 0.00 36.08 2.92
3513 5472 7.724061 TGATGATTGGTTGAATGATCTGATGAT 59.276 33.333 0.00 0.00 36.08 2.45
3514 5473 9.227777 GATGATTGGTTGAATGATCTGATGATA 57.772 33.333 0.00 0.00 33.23 2.15
3515 5474 9.755122 ATGATTGGTTGAATGATCTGATGATAT 57.245 29.630 0.00 0.00 32.19 1.63
3516 5475 9.010029 TGATTGGTTGAATGATCTGATGATATG 57.990 33.333 0.00 0.00 32.19 1.78
3517 5476 6.812879 TGGTTGAATGATCTGATGATATGC 57.187 37.500 0.00 0.00 32.19 3.14
3518 5477 6.540083 TGGTTGAATGATCTGATGATATGCT 58.460 36.000 0.00 0.00 32.19 3.79
3519 5478 7.682628 TGGTTGAATGATCTGATGATATGCTA 58.317 34.615 0.00 0.00 32.19 3.49
3630 5589 5.214293 ACCAAACCCTCCTCGTATACTTAT 58.786 41.667 0.56 0.00 0.00 1.73
3875 5841 6.819397 TCTCGAGAATCTTGAACTGTTCTA 57.181 37.500 14.01 12.58 31.51 2.10
3951 5917 2.416893 GAGATTTGGTTCAGCGGACTTC 59.583 50.000 0.00 0.00 0.00 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
54 55 6.115448 ACTAGTAAATGAGAACTGCCAACT 57.885 37.500 0.00 0.00 0.00 3.16
208 210 7.651304 ACTCTGTTGATAAGCATATCTTCTTCG 59.349 37.037 10.11 0.00 38.99 3.79
216 218 9.499479 CTTGGATAACTCTGTTGATAAGCATAT 57.501 33.333 0.00 0.00 0.00 1.78
217 219 8.704668 TCTTGGATAACTCTGTTGATAAGCATA 58.295 33.333 0.00 0.00 0.00 3.14
218 220 7.568349 TCTTGGATAACTCTGTTGATAAGCAT 58.432 34.615 0.00 0.00 0.00 3.79
219 221 6.946340 TCTTGGATAACTCTGTTGATAAGCA 58.054 36.000 0.00 0.00 0.00 3.91
220 222 6.481644 CCTCTTGGATAACTCTGTTGATAAGC 59.518 42.308 0.00 0.00 34.57 3.09
221 223 7.493971 CACCTCTTGGATAACTCTGTTGATAAG 59.506 40.741 0.00 0.00 37.04 1.73
222 224 7.038302 ACACCTCTTGGATAACTCTGTTGATAA 60.038 37.037 0.00 0.00 37.04 1.75
223 225 6.440647 ACACCTCTTGGATAACTCTGTTGATA 59.559 38.462 0.00 0.00 37.04 2.15
224 226 5.249393 ACACCTCTTGGATAACTCTGTTGAT 59.751 40.000 0.00 0.00 37.04 2.57
225 227 4.593206 ACACCTCTTGGATAACTCTGTTGA 59.407 41.667 0.00 0.00 37.04 3.18
226 228 4.899502 ACACCTCTTGGATAACTCTGTTG 58.100 43.478 0.00 0.00 37.04 3.33
227 229 5.568620 AACACCTCTTGGATAACTCTGTT 57.431 39.130 0.00 0.00 37.04 3.16
228 230 5.568620 AAACACCTCTTGGATAACTCTGT 57.431 39.130 0.00 0.00 37.04 3.41
229 231 6.884280 AAAAACACCTCTTGGATAACTCTG 57.116 37.500 0.00 0.00 37.04 3.35
230 232 7.611855 CCATAAAAACACCTCTTGGATAACTCT 59.388 37.037 0.00 0.00 37.04 3.24
231 233 7.610305 TCCATAAAAACACCTCTTGGATAACTC 59.390 37.037 0.00 0.00 37.04 3.01
232 234 7.393515 GTCCATAAAAACACCTCTTGGATAACT 59.606 37.037 0.00 0.00 34.55 2.24
233 235 7.535997 GTCCATAAAAACACCTCTTGGATAAC 58.464 38.462 0.00 0.00 34.55 1.89
234 236 6.373216 CGTCCATAAAAACACCTCTTGGATAA 59.627 38.462 0.00 0.00 34.55 1.75
235 237 5.878116 CGTCCATAAAAACACCTCTTGGATA 59.122 40.000 0.00 0.00 34.55 2.59
236 238 4.700213 CGTCCATAAAAACACCTCTTGGAT 59.300 41.667 0.00 0.00 34.55 3.41
237 239 4.069304 CGTCCATAAAAACACCTCTTGGA 58.931 43.478 0.00 0.00 37.04 3.53
238 240 3.365969 GCGTCCATAAAAACACCTCTTGG 60.366 47.826 0.00 0.00 39.83 3.61
239 241 3.666902 CGCGTCCATAAAAACACCTCTTG 60.667 47.826 0.00 0.00 0.00 3.02
240 242 2.482721 CGCGTCCATAAAAACACCTCTT 59.517 45.455 0.00 0.00 0.00 2.85
241 243 2.073816 CGCGTCCATAAAAACACCTCT 58.926 47.619 0.00 0.00 0.00 3.69
242 244 1.465187 GCGCGTCCATAAAAACACCTC 60.465 52.381 8.43 0.00 0.00 3.85
243 245 0.519961 GCGCGTCCATAAAAACACCT 59.480 50.000 8.43 0.00 0.00 4.00
244 246 0.791610 CGCGCGTCCATAAAAACACC 60.792 55.000 24.19 0.00 0.00 4.16
245 247 0.164217 TCGCGCGTCCATAAAAACAC 59.836 50.000 30.98 0.00 0.00 3.32
246 248 0.866427 TTCGCGCGTCCATAAAAACA 59.134 45.000 30.98 1.78 0.00 2.83
247 249 1.837747 CATTCGCGCGTCCATAAAAAC 59.162 47.619 30.98 0.00 0.00 2.43
248 250 1.202087 CCATTCGCGCGTCCATAAAAA 60.202 47.619 30.98 14.44 0.00 1.94
249 251 0.375454 CCATTCGCGCGTCCATAAAA 59.625 50.000 30.98 15.26 0.00 1.52
250 252 1.433053 CCCATTCGCGCGTCCATAAA 61.433 55.000 30.98 16.07 0.00 1.40
251 253 1.885388 CCCATTCGCGCGTCCATAA 60.885 57.895 30.98 16.88 0.00 1.90
252 254 2.279851 CCCATTCGCGCGTCCATA 60.280 61.111 30.98 6.92 0.00 2.74
267 269 1.598517 CTTTTTGCCATGGGAGCCC 59.401 57.895 15.13 0.00 0.00 5.19
268 270 0.904394 TCCTTTTTGCCATGGGAGCC 60.904 55.000 15.13 0.00 0.00 4.70
269 271 0.533951 CTCCTTTTTGCCATGGGAGC 59.466 55.000 15.13 0.00 37.37 4.70
270 272 0.533951 GCTCCTTTTTGCCATGGGAG 59.466 55.000 15.13 10.53 44.41 4.30
271 273 2.669878 GCTCCTTTTTGCCATGGGA 58.330 52.632 15.13 8.24 0.00 4.37
278 280 1.000171 CACCTCTTGGCTCCTTTTTGC 60.000 52.381 0.00 0.00 36.63 3.68
279 281 2.310538 ACACCTCTTGGCTCCTTTTTG 58.689 47.619 0.00 0.00 36.63 2.44
280 282 2.755952 ACACCTCTTGGCTCCTTTTT 57.244 45.000 0.00 0.00 36.63 1.94
281 283 2.755952 AACACCTCTTGGCTCCTTTT 57.244 45.000 0.00 0.00 36.63 2.27
282 284 2.175715 AGAAACACCTCTTGGCTCCTTT 59.824 45.455 0.00 0.00 36.63 3.11
283 285 1.777272 AGAAACACCTCTTGGCTCCTT 59.223 47.619 0.00 0.00 36.63 3.36
284 286 1.439543 AGAAACACCTCTTGGCTCCT 58.560 50.000 0.00 0.00 36.63 3.69
285 287 2.278332 AAGAAACACCTCTTGGCTCC 57.722 50.000 0.00 0.00 34.31 4.70
286 288 3.214328 TGAAAGAAACACCTCTTGGCTC 58.786 45.455 0.00 0.00 35.79 4.70
287 289 3.297134 TGAAAGAAACACCTCTTGGCT 57.703 42.857 0.00 0.00 35.79 4.75
288 290 3.381590 ACTTGAAAGAAACACCTCTTGGC 59.618 43.478 0.00 0.00 35.79 4.52
289 291 4.202050 CCACTTGAAAGAAACACCTCTTGG 60.202 45.833 0.00 0.00 35.79 3.61
290 292 4.734695 GCCACTTGAAAGAAACACCTCTTG 60.735 45.833 0.00 0.00 35.79 3.02
291 293 3.381590 GCCACTTGAAAGAAACACCTCTT 59.618 43.478 0.00 0.00 37.24 2.85
292 294 2.952310 GCCACTTGAAAGAAACACCTCT 59.048 45.455 0.00 0.00 0.00 3.69
293 295 2.952310 AGCCACTTGAAAGAAACACCTC 59.048 45.455 0.00 0.00 0.00 3.85
294 296 3.018423 AGCCACTTGAAAGAAACACCT 57.982 42.857 0.00 0.00 0.00 4.00
295 297 3.447742 CAAGCCACTTGAAAGAAACACC 58.552 45.455 0.97 0.00 43.42 4.16
296 298 3.130340 TCCAAGCCACTTGAAAGAAACAC 59.870 43.478 8.87 0.00 43.42 3.32
297 299 3.130340 GTCCAAGCCACTTGAAAGAAACA 59.870 43.478 8.87 0.00 43.42 2.83
298 300 3.381590 AGTCCAAGCCACTTGAAAGAAAC 59.618 43.478 8.87 0.00 43.42 2.78
299 301 3.631250 AGTCCAAGCCACTTGAAAGAAA 58.369 40.909 8.87 0.00 43.42 2.52
300 302 3.297134 AGTCCAAGCCACTTGAAAGAA 57.703 42.857 8.87 0.00 43.42 2.52
301 303 3.117888 AGAAGTCCAAGCCACTTGAAAGA 60.118 43.478 8.87 0.00 43.42 2.52
302 304 3.217626 AGAAGTCCAAGCCACTTGAAAG 58.782 45.455 8.87 0.00 43.42 2.62
303 305 3.297134 AGAAGTCCAAGCCACTTGAAA 57.703 42.857 8.87 0.00 43.42 2.69
304 306 3.297134 AAGAAGTCCAAGCCACTTGAA 57.703 42.857 8.87 0.00 43.42 2.69
305 307 3.297134 AAAGAAGTCCAAGCCACTTGA 57.703 42.857 8.87 0.00 43.42 3.02
306 308 3.709987 CAAAAGAAGTCCAAGCCACTTG 58.290 45.455 0.24 0.24 40.75 3.16
307 309 2.101415 GCAAAAGAAGTCCAAGCCACTT 59.899 45.455 0.00 0.00 36.77 3.16
308 310 1.683385 GCAAAAGAAGTCCAAGCCACT 59.317 47.619 0.00 0.00 0.00 4.00
309 311 1.683385 AGCAAAAGAAGTCCAAGCCAC 59.317 47.619 0.00 0.00 0.00 5.01
318 320 4.038042 GCCCAAAGAACTAGCAAAAGAAGT 59.962 41.667 0.00 0.00 0.00 3.01
362 364 2.621070 AGCCTCCTAAACACCAGAGAA 58.379 47.619 0.00 0.00 0.00 2.87
363 365 2.303022 CAAGCCTCCTAAACACCAGAGA 59.697 50.000 0.00 0.00 0.00 3.10
455 457 9.889128 CATGATAAAATTACAATTTTCCCCAGT 57.111 29.630 14.27 0.00 43.12 4.00
456 458 9.328845 CCATGATAAAATTACAATTTTCCCCAG 57.671 33.333 14.27 5.75 43.12 4.45
457 459 9.051259 TCCATGATAAAATTACAATTTTCCCCA 57.949 29.630 14.27 11.44 43.12 4.96
458 460 9.546428 CTCCATGATAAAATTACAATTTTCCCC 57.454 33.333 14.27 7.35 43.12 4.81
459 461 9.546428 CCTCCATGATAAAATTACAATTTTCCC 57.454 33.333 14.27 9.24 43.12 3.97
460 462 9.045223 GCCTCCATGATAAAATTACAATTTTCC 57.955 33.333 14.27 9.51 43.12 3.13
461 463 9.822185 AGCCTCCATGATAAAATTACAATTTTC 57.178 29.630 14.27 4.59 43.12 2.29
462 464 9.603921 CAGCCTCCATGATAAAATTACAATTTT 57.396 29.630 15.01 15.01 46.85 1.82
463 465 8.206189 CCAGCCTCCATGATAAAATTACAATTT 58.794 33.333 0.00 0.00 40.15 1.82
464 466 7.687592 GCCAGCCTCCATGATAAAATTACAATT 60.688 37.037 0.00 0.00 0.00 2.32
465 467 6.239402 GCCAGCCTCCATGATAAAATTACAAT 60.239 38.462 0.00 0.00 0.00 2.71
466 468 5.068987 GCCAGCCTCCATGATAAAATTACAA 59.931 40.000 0.00 0.00 0.00 2.41
467 469 4.584325 GCCAGCCTCCATGATAAAATTACA 59.416 41.667 0.00 0.00 0.00 2.41
468 470 4.021981 GGCCAGCCTCCATGATAAAATTAC 60.022 45.833 0.00 0.00 0.00 1.89
469 471 4.151883 GGCCAGCCTCCATGATAAAATTA 58.848 43.478 0.00 0.00 0.00 1.40
470 472 2.967887 GGCCAGCCTCCATGATAAAATT 59.032 45.455 0.00 0.00 0.00 1.82
471 473 2.601905 GGCCAGCCTCCATGATAAAAT 58.398 47.619 0.00 0.00 0.00 1.82
472 474 1.411501 GGGCCAGCCTCCATGATAAAA 60.412 52.381 4.39 0.00 36.10 1.52
473 475 0.185901 GGGCCAGCCTCCATGATAAA 59.814 55.000 4.39 0.00 36.10 1.40
474 476 1.846261 GGGCCAGCCTCCATGATAA 59.154 57.895 4.39 0.00 36.10 1.75
475 477 2.519622 CGGGCCAGCCTCCATGATA 61.520 63.158 4.39 0.00 36.10 2.15
476 478 3.882326 CGGGCCAGCCTCCATGAT 61.882 66.667 4.39 0.00 36.10 2.45
478 480 3.643595 TTTCGGGCCAGCCTCCATG 62.644 63.158 4.39 0.00 36.10 3.66
479 481 2.439553 TTTTTCGGGCCAGCCTCCAT 62.440 55.000 4.39 0.00 36.10 3.41
480 482 3.140073 TTTTTCGGGCCAGCCTCCA 62.140 57.895 4.39 0.00 36.10 3.86
481 483 2.282887 TTTTTCGGGCCAGCCTCC 60.283 61.111 4.39 0.00 36.10 4.30
482 484 1.250840 ATGTTTTTCGGGCCAGCCTC 61.251 55.000 4.39 0.00 36.10 4.70
483 485 0.039035 TATGTTTTTCGGGCCAGCCT 59.961 50.000 4.39 0.00 36.10 4.58
484 486 0.455815 CTATGTTTTTCGGGCCAGCC 59.544 55.000 4.39 0.00 0.00 4.85
485 487 1.459450 TCTATGTTTTTCGGGCCAGC 58.541 50.000 4.39 0.00 0.00 4.85
486 488 4.718940 ATTTCTATGTTTTTCGGGCCAG 57.281 40.909 4.39 0.00 0.00 4.85
487 489 5.124776 CAGTATTTCTATGTTTTTCGGGCCA 59.875 40.000 4.39 0.00 0.00 5.36
488 490 5.578776 CAGTATTTCTATGTTTTTCGGGCC 58.421 41.667 0.00 0.00 0.00 5.80
489 491 5.034797 GCAGTATTTCTATGTTTTTCGGGC 58.965 41.667 0.00 0.00 0.00 6.13
490 492 6.436843 AGCAGTATTTCTATGTTTTTCGGG 57.563 37.500 0.00 0.00 0.00 5.14
491 493 7.970384 TGTAGCAGTATTTCTATGTTTTTCGG 58.030 34.615 0.00 0.00 0.00 4.30
492 494 9.820229 TTTGTAGCAGTATTTCTATGTTTTTCG 57.180 29.630 0.00 0.00 0.00 3.46
502 504 9.507329 TCTCTTTGATTTTGTAGCAGTATTTCT 57.493 29.630 0.00 0.00 0.00 2.52
507 509 9.066892 ACAATTCTCTTTGATTTTGTAGCAGTA 57.933 29.630 0.00 0.00 32.89 2.74
508 510 7.945134 ACAATTCTCTTTGATTTTGTAGCAGT 58.055 30.769 0.00 0.00 32.89 4.40
509 511 9.897744 TTACAATTCTCTTTGATTTTGTAGCAG 57.102 29.630 0.00 0.00 36.21 4.24
526 528 9.690913 TCATCTCCATGAGAAAATTACAATTCT 57.309 29.630 0.00 0.00 42.27 2.40
531 533 9.246670 ACAAATCATCTCCATGAGAAAATTACA 57.753 29.630 0.00 0.00 42.53 2.41
532 534 9.512435 CACAAATCATCTCCATGAGAAAATTAC 57.488 33.333 0.00 0.00 42.53 1.89
533 535 9.465199 TCACAAATCATCTCCATGAGAAAATTA 57.535 29.630 0.00 0.00 42.53 1.40
534 536 8.357290 TCACAAATCATCTCCATGAGAAAATT 57.643 30.769 0.00 0.00 42.53 1.82
535 537 7.949690 TCACAAATCATCTCCATGAGAAAAT 57.050 32.000 0.00 0.00 42.53 1.82
536 538 7.666804 TCTTCACAAATCATCTCCATGAGAAAA 59.333 33.333 0.00 0.00 42.53 2.29
537 539 7.120285 GTCTTCACAAATCATCTCCATGAGAAA 59.880 37.037 0.00 0.00 42.53 2.52
538 540 6.596888 GTCTTCACAAATCATCTCCATGAGAA 59.403 38.462 0.00 0.00 42.53 2.87
539 541 6.111382 GTCTTCACAAATCATCTCCATGAGA 58.889 40.000 0.00 0.00 42.53 3.27
540 542 5.878669 TGTCTTCACAAATCATCTCCATGAG 59.121 40.000 0.00 0.00 42.53 2.90
541 543 5.807909 TGTCTTCACAAATCATCTCCATGA 58.192 37.500 0.00 0.00 43.45 3.07
542 544 6.694877 ATGTCTTCACAAATCATCTCCATG 57.305 37.500 0.00 0.00 35.64 3.66
543 545 7.117397 AGAATGTCTTCACAAATCATCTCCAT 58.883 34.615 0.00 0.00 35.64 3.41
544 546 6.479006 AGAATGTCTTCACAAATCATCTCCA 58.521 36.000 0.00 0.00 35.64 3.86
545 547 6.998968 AGAATGTCTTCACAAATCATCTCC 57.001 37.500 0.00 0.00 35.64 3.71
546 548 9.688592 AAAAAGAATGTCTTCACAAATCATCTC 57.311 29.630 0.00 0.00 35.27 2.75
570 572 7.540400 CACATTGCGTAATTGATACTCCAAAAA 59.460 33.333 0.00 0.00 31.56 1.94
571 573 7.026562 CACATTGCGTAATTGATACTCCAAAA 58.973 34.615 0.00 0.00 31.56 2.44
572 574 6.150307 ACACATTGCGTAATTGATACTCCAAA 59.850 34.615 12.59 0.00 31.56 3.28
573 575 5.645929 ACACATTGCGTAATTGATACTCCAA 59.354 36.000 12.59 0.00 32.00 3.53
574 576 5.064579 CACACATTGCGTAATTGATACTCCA 59.935 40.000 12.59 0.00 31.96 3.86
575 577 5.064707 ACACACATTGCGTAATTGATACTCC 59.935 40.000 12.59 0.00 31.96 3.85
576 578 5.959527 CACACACATTGCGTAATTGATACTC 59.040 40.000 12.59 0.00 31.96 2.59
577 579 5.163764 CCACACACATTGCGTAATTGATACT 60.164 40.000 12.59 0.00 31.96 2.12
578 580 5.027737 CCACACACATTGCGTAATTGATAC 58.972 41.667 12.59 0.00 0.00 2.24
579 581 4.095632 CCCACACACATTGCGTAATTGATA 59.904 41.667 12.59 0.00 0.00 2.15
580 582 3.119531 CCCACACACATTGCGTAATTGAT 60.120 43.478 12.59 0.00 0.00 2.57
581 583 2.227626 CCCACACACATTGCGTAATTGA 59.772 45.455 12.59 0.00 0.00 2.57
582 584 2.030363 ACCCACACACATTGCGTAATTG 60.030 45.455 0.00 1.86 0.00 2.32
583 585 2.235016 ACCCACACACATTGCGTAATT 58.765 42.857 0.00 0.00 0.00 1.40
584 586 1.904287 ACCCACACACATTGCGTAAT 58.096 45.000 0.00 0.00 0.00 1.89
585 587 2.144730 GTACCCACACACATTGCGTAA 58.855 47.619 0.00 0.00 0.00 3.18
586 588 1.345089 AGTACCCACACACATTGCGTA 59.655 47.619 0.00 0.00 0.00 4.42
587 589 0.107831 AGTACCCACACACATTGCGT 59.892 50.000 0.00 0.00 0.00 5.24
588 590 0.516877 CAGTACCCACACACATTGCG 59.483 55.000 0.00 0.00 0.00 4.85
589 591 0.881118 CCAGTACCCACACACATTGC 59.119 55.000 0.00 0.00 0.00 3.56
590 592 2.270352 ACCAGTACCCACACACATTG 57.730 50.000 0.00 0.00 0.00 2.82
591 593 2.290071 GCTACCAGTACCCACACACATT 60.290 50.000 0.00 0.00 0.00 2.71
592 594 1.278127 GCTACCAGTACCCACACACAT 59.722 52.381 0.00 0.00 0.00 3.21
593 595 0.682852 GCTACCAGTACCCACACACA 59.317 55.000 0.00 0.00 0.00 3.72
594 596 0.036671 GGCTACCAGTACCCACACAC 60.037 60.000 0.00 0.00 0.00 3.82
595 597 0.472161 TGGCTACCAGTACCCACACA 60.472 55.000 0.00 0.00 0.00 3.72
596 598 0.249398 CTGGCTACCAGTACCCACAC 59.751 60.000 5.43 0.00 45.82 3.82
597 599 2.678786 CTGGCTACCAGTACCCACA 58.321 57.895 5.43 0.00 45.82 4.17
606 608 1.918293 CTGGTGTCCCTGGCTACCA 60.918 63.158 12.39 12.39 40.67 3.25
607 609 1.918800 ACTGGTGTCCCTGGCTACC 60.919 63.158 5.58 5.58 34.13 3.18
608 610 1.296715 CACTGGTGTCCCTGGCTAC 59.703 63.158 0.00 0.00 34.13 3.58
609 611 1.918293 CCACTGGTGTCCCTGGCTA 60.918 63.158 0.00 0.00 34.13 3.93
610 612 3.252284 CCACTGGTGTCCCTGGCT 61.252 66.667 0.00 0.00 34.13 4.75
612 614 4.704833 CGCCACTGGTGTCCCTGG 62.705 72.222 0.00 0.00 34.13 4.45
613 615 4.704833 CCGCCACTGGTGTCCCTG 62.705 72.222 7.86 0.00 35.86 4.45
698 700 4.337145 TGGCCCATGTACTAAAACGAATT 58.663 39.130 0.00 0.00 0.00 2.17
699 701 3.958018 TGGCCCATGTACTAAAACGAAT 58.042 40.909 0.00 0.00 0.00 3.34
748 751 2.341176 CTGCAACTGGGCCTTTGC 59.659 61.111 26.96 26.96 46.88 3.68
772 775 4.081309 TGGCCGTGCTAACTAGTTTTAGAT 60.081 41.667 14.49 0.00 31.60 1.98
773 776 3.258872 TGGCCGTGCTAACTAGTTTTAGA 59.741 43.478 14.49 0.00 31.60 2.10
817 825 3.381590 GGATTTTCTGGAATGCCTGTACC 59.618 47.826 0.00 0.00 34.91 3.34
955 1013 3.670637 GATCAGGTGCTCGCAGCCA 62.671 63.158 16.51 5.28 44.62 4.75
959 1017 1.902765 ATGTGGATCAGGTGCTCGCA 61.903 55.000 0.00 0.00 0.00 5.10
963 1021 1.267574 ACGGATGTGGATCAGGTGCT 61.268 55.000 0.00 0.00 0.00 4.40
1010 1068 1.968540 GGCACCGCTGCTTCTTTCT 60.969 57.895 2.19 0.00 43.66 2.52
1079 1137 7.664731 AGAATAGATTGGACTATTTGCATGAGG 59.335 37.037 0.00 0.00 41.34 3.86
1100 1213 9.319143 GAGCTTGAGATTTAGTAGCAAAGAATA 57.681 33.333 0.00 0.00 34.37 1.75
1114 1227 1.630878 AGGAACGGGAGCTTGAGATTT 59.369 47.619 0.00 0.00 0.00 2.17
1158 1271 4.836175 TCACCATGTCAAGTACTGAACCTA 59.164 41.667 0.00 0.00 35.22 3.08
1216 1333 6.928492 GGAGTTCCAAAATAAGCAACAATTGA 59.072 34.615 13.59 0.00 35.64 2.57
1267 1384 5.388654 AGGTTCAGGAACAAGAACATGAAT 58.611 37.500 13.62 0.00 43.87 2.57
1277 1394 2.655090 TGCATCAGGTTCAGGAACAA 57.345 45.000 13.62 0.00 42.85 2.83
1342 1459 4.338379 ACACTTCAGGTTCAGGAACTAC 57.662 45.455 11.56 0.00 40.94 2.73
1372 1489 3.371898 TGCAAAGTGTTATCATGAGAGCG 59.628 43.478 0.09 0.00 0.00 5.03
1427 1544 1.484240 GGAGTCCAGGATCAGGTTCAG 59.516 57.143 3.60 0.00 0.00 3.02
1467 1584 4.502950 GCATCTCTGATTTCTGGAGTAGGG 60.503 50.000 0.00 0.00 0.00 3.53
1476 1593 3.773667 TCCTCACTGCATCTCTGATTTCT 59.226 43.478 0.00 0.00 0.00 2.52
1478 1595 3.118334 CCTCCTCACTGCATCTCTGATTT 60.118 47.826 0.00 0.00 0.00 2.17
1502 1619 5.710099 TGACATGGACCTTTCTTCAAATACC 59.290 40.000 0.00 0.00 0.00 2.73
1549 1666 4.817517 ACCCTGTTATCTGTAGTGTTTCG 58.182 43.478 0.00 0.00 0.00 3.46
1551 1668 7.913789 TGAATACCCTGTTATCTGTAGTGTTT 58.086 34.615 0.00 0.00 0.00 2.83
1566 1683 2.697751 CCACTCCTCTCTGAATACCCTG 59.302 54.545 0.00 0.00 0.00 4.45
1579 1696 2.528041 AACTCGTCAAACCACTCCTC 57.472 50.000 0.00 0.00 0.00 3.71
1639 2099 2.494059 ACCAATCCAACAACTCACGAG 58.506 47.619 0.00 0.00 0.00 4.18
1689 2149 3.875727 CCAGGAGCATTGTCATTGAGTAG 59.124 47.826 0.00 0.00 0.00 2.57
1819 2279 3.902150 TCACGAGACTCATCAACAAGTC 58.098 45.455 2.82 0.00 41.81 3.01
1846 2306 3.994392 GACAGCCATTTGTTCTCTAACGA 59.006 43.478 0.00 0.00 38.53 3.85
1894 2354 9.696917 CAGCAAGTAACCTTTTCAAAATATCTT 57.303 29.630 0.00 0.00 0.00 2.40
1942 2402 3.807071 GGATCTTTTGAGAGAAGCGGATC 59.193 47.826 0.00 0.00 0.00 3.36
2011 2471 1.202758 CGCCATCATAACCTTGCCCTA 60.203 52.381 0.00 0.00 0.00 3.53
2225 4155 9.811995 ACAATGATTCACTTGAATATTCAATGG 57.188 29.630 26.83 21.35 45.26 3.16
2270 4200 4.035558 TGCAAAGTACAAGTCAGCAAGAAG 59.964 41.667 0.00 0.00 0.00 2.85
2312 4242 7.305418 GCATCTTTTCTTTTACACGAAACACTG 60.305 37.037 0.00 0.00 0.00 3.66
2317 4247 9.906660 ATAATGCATCTTTTCTTTTACACGAAA 57.093 25.926 0.00 0.00 0.00 3.46
2384 4314 4.443598 CCTCTTCCTTTAAGAATCTCCCCG 60.444 50.000 0.00 0.00 43.66 5.73
2394 4324 5.964958 TGATGTTTGCCTCTTCCTTTAAG 57.035 39.130 0.00 0.00 36.45 1.85
2438 4368 1.278985 GATCCCCATCGCATATCACCA 59.721 52.381 0.00 0.00 0.00 4.17
2446 4376 1.056125 ATGGTGAGATCCCCATCGCA 61.056 55.000 3.86 0.00 36.76 5.10
2478 4408 5.066375 CCGAATCTCACATTTGATAAAGCCA 59.934 40.000 0.00 0.00 0.00 4.75
2484 4414 7.047271 TGAATCACCGAATCTCACATTTGATA 58.953 34.615 0.00 0.00 0.00 2.15
2495 4425 3.340814 AGCACTTGAATCACCGAATCT 57.659 42.857 0.00 0.00 0.00 2.40
2547 4477 4.760047 CCCTGAAGTGGCGGTCCG 62.760 72.222 6.99 6.99 34.14 4.79
2548 4478 2.406002 TTTCCCTGAAGTGGCGGTCC 62.406 60.000 0.00 0.00 0.00 4.46
2549 4479 1.072505 TTTCCCTGAAGTGGCGGTC 59.927 57.895 0.00 0.00 0.00 4.79
2550 4480 1.228154 GTTTCCCTGAAGTGGCGGT 60.228 57.895 0.00 0.00 0.00 5.68
2551 4481 1.073199 AGTTTCCCTGAAGTGGCGG 59.927 57.895 0.00 0.00 0.00 6.13
2552 4482 1.237285 CCAGTTTCCCTGAAGTGGCG 61.237 60.000 0.00 0.00 44.49 5.69
2553 4483 0.895559 CCCAGTTTCCCTGAAGTGGC 60.896 60.000 6.06 0.00 45.01 5.01
2554 4484 0.895559 GCCCAGTTTCCCTGAAGTGG 60.896 60.000 4.82 4.82 45.63 4.00
2555 4485 1.237285 CGCCCAGTTTCCCTGAAGTG 61.237 60.000 0.00 0.00 44.49 3.16
2556 4486 1.073199 CGCCCAGTTTCCCTGAAGT 59.927 57.895 0.00 0.00 44.49 3.01
2557 4487 1.675641 CCGCCCAGTTTCCCTGAAG 60.676 63.158 0.00 0.00 44.49 3.02
2558 4488 2.434331 CCGCCCAGTTTCCCTGAA 59.566 61.111 0.00 0.00 44.49 3.02
2559 4489 3.646715 CCCGCCCAGTTTCCCTGA 61.647 66.667 0.00 0.00 44.49 3.86
2562 4492 4.986708 TTGCCCGCCCAGTTTCCC 62.987 66.667 0.00 0.00 0.00 3.97
2563 4493 2.757980 TACTTGCCCGCCCAGTTTCC 62.758 60.000 0.00 0.00 0.00 3.13
2564 4494 1.302993 TACTTGCCCGCCCAGTTTC 60.303 57.895 0.00 0.00 0.00 2.78
2565 4495 1.602605 GTACTTGCCCGCCCAGTTT 60.603 57.895 0.00 0.00 0.00 2.66
2566 4496 2.033602 GTACTTGCCCGCCCAGTT 59.966 61.111 0.00 0.00 0.00 3.16
2567 4497 2.346284 TTTGTACTTGCCCGCCCAGT 62.346 55.000 0.00 0.00 0.00 4.00
2568 4498 1.602323 TTTGTACTTGCCCGCCCAG 60.602 57.895 0.00 0.00 0.00 4.45
2569 4499 1.899534 GTTTGTACTTGCCCGCCCA 60.900 57.895 0.00 0.00 0.00 5.36
2570 4500 1.457009 TTGTTTGTACTTGCCCGCCC 61.457 55.000 0.00 0.00 0.00 6.13
2571 4501 0.386113 TTTGTTTGTACTTGCCCGCC 59.614 50.000 0.00 0.00 0.00 6.13
2572 4502 1.766069 CTTTGTTTGTACTTGCCCGC 58.234 50.000 0.00 0.00 0.00 6.13
2573 4503 1.601914 GGCTTTGTTTGTACTTGCCCG 60.602 52.381 0.00 0.00 32.52 6.13
2574 4504 1.270094 GGGCTTTGTTTGTACTTGCCC 60.270 52.381 4.31 4.31 42.57 5.36
2575 4505 1.410882 TGGGCTTTGTTTGTACTTGCC 59.589 47.619 0.00 0.00 35.46 4.52
2576 4506 2.880963 TGGGCTTTGTTTGTACTTGC 57.119 45.000 0.00 0.00 0.00 4.01
2577 4507 6.084326 ACTAATGGGCTTTGTTTGTACTTG 57.916 37.500 0.00 0.00 0.00 3.16
2578 4508 6.724893 AACTAATGGGCTTTGTTTGTACTT 57.275 33.333 0.00 0.00 30.08 2.24
2579 4509 6.724893 AAACTAATGGGCTTTGTTTGTACT 57.275 33.333 0.00 0.00 39.99 2.73
2580 4510 6.292649 GCAAAACTAATGGGCTTTGTTTGTAC 60.293 38.462 1.21 0.00 40.39 2.90
2581 4511 5.755861 GCAAAACTAATGGGCTTTGTTTGTA 59.244 36.000 1.21 0.00 40.39 2.41
2582 4512 4.574421 GCAAAACTAATGGGCTTTGTTTGT 59.426 37.500 1.21 0.00 40.39 2.83
2583 4513 4.024133 GGCAAAACTAATGGGCTTTGTTTG 60.024 41.667 1.21 0.00 40.39 2.93
2584 4514 4.133820 GGCAAAACTAATGGGCTTTGTTT 58.866 39.130 0.00 0.00 42.18 2.83
2585 4515 3.495983 GGGCAAAACTAATGGGCTTTGTT 60.496 43.478 0.00 0.00 34.83 2.83
2586 4516 2.038426 GGGCAAAACTAATGGGCTTTGT 59.962 45.455 0.00 0.00 32.54 2.83
2587 4517 2.302733 AGGGCAAAACTAATGGGCTTTG 59.697 45.455 0.00 0.00 32.99 2.77
2588 4518 2.567169 GAGGGCAAAACTAATGGGCTTT 59.433 45.455 0.00 0.00 0.00 3.51
2589 4519 2.179427 GAGGGCAAAACTAATGGGCTT 58.821 47.619 0.00 0.00 0.00 4.35
2590 4520 1.077005 TGAGGGCAAAACTAATGGGCT 59.923 47.619 0.00 0.00 0.00 5.19
2591 4521 1.555967 TGAGGGCAAAACTAATGGGC 58.444 50.000 0.00 0.00 0.00 5.36
2592 4522 2.497273 CCTTGAGGGCAAAACTAATGGG 59.503 50.000 0.00 0.00 32.73 4.00
2593 4523 3.874392 CCTTGAGGGCAAAACTAATGG 57.126 47.619 0.00 0.00 32.73 3.16
2605 4535 1.694696 GAGTATACTGGGCCTTGAGGG 59.305 57.143 10.90 0.00 35.18 4.30
2606 4536 2.630580 GAGAGTATACTGGGCCTTGAGG 59.369 54.545 10.90 0.00 38.53 3.86
2607 4537 3.300388 TGAGAGTATACTGGGCCTTGAG 58.700 50.000 10.90 0.00 0.00 3.02
2608 4538 3.300388 CTGAGAGTATACTGGGCCTTGA 58.700 50.000 10.90 0.00 0.00 3.02
2609 4539 2.224161 GCTGAGAGTATACTGGGCCTTG 60.224 54.545 10.90 0.00 0.00 3.61
2610 4540 2.043227 GCTGAGAGTATACTGGGCCTT 58.957 52.381 10.90 0.00 0.00 4.35
2611 4541 1.710816 GCTGAGAGTATACTGGGCCT 58.289 55.000 10.90 0.26 0.00 5.19
2612 4542 0.315568 CGCTGAGAGTATACTGGGCC 59.684 60.000 10.90 0.00 0.00 5.80
2613 4543 0.319125 GCGCTGAGAGTATACTGGGC 60.319 60.000 10.90 11.75 36.97 5.36
2614 4544 1.268352 GAGCGCTGAGAGTATACTGGG 59.732 57.143 18.48 5.42 0.00 4.45
2615 4545 1.268352 GGAGCGCTGAGAGTATACTGG 59.732 57.143 18.48 0.00 0.00 4.00
2616 4546 1.950216 TGGAGCGCTGAGAGTATACTG 59.050 52.381 18.48 0.00 0.00 2.74
2617 4547 1.950909 GTGGAGCGCTGAGAGTATACT 59.049 52.381 18.48 4.68 0.00 2.12
2618 4548 1.950909 AGTGGAGCGCTGAGAGTATAC 59.049 52.381 18.48 0.00 0.00 1.47
2619 4549 1.950216 CAGTGGAGCGCTGAGAGTATA 59.050 52.381 18.48 0.00 43.78 1.47
2620 4550 0.743688 CAGTGGAGCGCTGAGAGTAT 59.256 55.000 18.48 0.00 43.78 2.12
2621 4551 0.609406 ACAGTGGAGCGCTGAGAGTA 60.609 55.000 18.48 0.00 43.78 2.59
2622 4552 0.609406 TACAGTGGAGCGCTGAGAGT 60.609 55.000 18.48 9.59 43.78 3.24
2623 4553 0.743688 ATACAGTGGAGCGCTGAGAG 59.256 55.000 18.48 2.86 43.78 3.20
2624 4554 1.186200 AATACAGTGGAGCGCTGAGA 58.814 50.000 18.48 0.00 43.78 3.27
2625 4555 2.015736 AAATACAGTGGAGCGCTGAG 57.984 50.000 18.48 1.58 43.78 3.35
2626 4556 2.496070 AGTAAATACAGTGGAGCGCTGA 59.504 45.455 18.48 0.00 43.78 4.26
2627 4557 2.604914 CAGTAAATACAGTGGAGCGCTG 59.395 50.000 18.48 2.44 46.11 5.18
2628 4558 2.233922 ACAGTAAATACAGTGGAGCGCT 59.766 45.455 11.27 11.27 0.00 5.92
2629 4559 2.348666 CACAGTAAATACAGTGGAGCGC 59.651 50.000 0.00 0.00 39.23 5.92
2635 4565 3.009723 CCAGCCCACAGTAAATACAGTG 58.990 50.000 8.62 8.62 41.57 3.66
2636 4566 2.026262 CCCAGCCCACAGTAAATACAGT 60.026 50.000 0.00 0.00 0.00 3.55
2637 4567 2.643551 CCCAGCCCACAGTAAATACAG 58.356 52.381 0.00 0.00 0.00 2.74
2638 4568 1.340600 GCCCAGCCCACAGTAAATACA 60.341 52.381 0.00 0.00 0.00 2.29
2639 4569 1.389555 GCCCAGCCCACAGTAAATAC 58.610 55.000 0.00 0.00 0.00 1.89
2640 4570 0.107410 CGCCCAGCCCACAGTAAATA 60.107 55.000 0.00 0.00 0.00 1.40
2641 4571 1.378514 CGCCCAGCCCACAGTAAAT 60.379 57.895 0.00 0.00 0.00 1.40
2642 4572 2.033448 CGCCCAGCCCACAGTAAA 59.967 61.111 0.00 0.00 0.00 2.01
2643 4573 4.028490 CCGCCCAGCCCACAGTAA 62.028 66.667 0.00 0.00 0.00 2.24
2661 4591 0.972883 TTACCAAAACAGGCCATGGC 59.027 50.000 29.47 29.47 36.37 4.40
2662 4592 1.967066 TGTTACCAAAACAGGCCATGG 59.033 47.619 7.63 7.63 38.91 3.66
2663 4593 2.606795 CGTGTTACCAAAACAGGCCATG 60.607 50.000 5.01 2.64 30.78 3.66
2664 4594 1.611491 CGTGTTACCAAAACAGGCCAT 59.389 47.619 5.01 0.00 30.78 4.40
2665 4595 1.025812 CGTGTTACCAAAACAGGCCA 58.974 50.000 5.01 0.00 30.78 5.36
2666 4596 1.026584 ACGTGTTACCAAAACAGGCC 58.973 50.000 0.00 0.00 39.01 5.19
2667 4597 2.350102 GCTACGTGTTACCAAAACAGGC 60.350 50.000 0.00 1.57 39.01 4.85
2668 4598 3.135994 AGCTACGTGTTACCAAAACAGG 58.864 45.455 0.00 8.55 40.62 4.00
2669 4599 3.185797 GGAGCTACGTGTTACCAAAACAG 59.814 47.826 0.00 0.00 0.00 3.16
2670 4600 3.132925 GGAGCTACGTGTTACCAAAACA 58.867 45.455 0.00 0.00 0.00 2.83
2671 4601 2.156310 CGGAGCTACGTGTTACCAAAAC 59.844 50.000 11.15 0.00 0.00 2.43
2672 4602 2.406130 CGGAGCTACGTGTTACCAAAA 58.594 47.619 11.15 0.00 0.00 2.44
2673 4603 2.068837 CGGAGCTACGTGTTACCAAA 57.931 50.000 11.15 0.00 0.00 3.28
2674 4604 3.798646 CGGAGCTACGTGTTACCAA 57.201 52.632 11.15 0.00 0.00 3.67
2688 4618 3.083349 TCCCCATCACTGGCGGAG 61.083 66.667 0.00 0.00 41.64 4.63
2689 4619 3.083349 CTCCCCATCACTGGCGGA 61.083 66.667 0.00 0.00 41.64 5.54
2690 4620 4.181010 CCTCCCCATCACTGGCGG 62.181 72.222 0.00 0.00 41.64 6.13
2691 4621 2.446848 ATCCTCCCCATCACTGGCG 61.447 63.158 0.00 0.00 41.64 5.69
2692 4622 1.150081 CATCCTCCCCATCACTGGC 59.850 63.158 0.00 0.00 41.64 4.85
2693 4623 1.150081 GCATCCTCCCCATCACTGG 59.850 63.158 0.00 0.00 42.73 4.00
2694 4624 1.227764 CGCATCCTCCCCATCACTG 60.228 63.158 0.00 0.00 0.00 3.66
2695 4625 2.446848 CCGCATCCTCCCCATCACT 61.447 63.158 0.00 0.00 0.00 3.41
2696 4626 2.111878 CCGCATCCTCCCCATCAC 59.888 66.667 0.00 0.00 0.00 3.06
2697 4627 2.040988 TCCGCATCCTCCCCATCA 60.041 61.111 0.00 0.00 0.00 3.07
2698 4628 2.427753 GTCCGCATCCTCCCCATC 59.572 66.667 0.00 0.00 0.00 3.51
2699 4629 3.550431 CGTCCGCATCCTCCCCAT 61.550 66.667 0.00 0.00 0.00 4.00
2700 4630 2.650226 TATCGTCCGCATCCTCCCCA 62.650 60.000 0.00 0.00 0.00 4.96
2701 4631 1.878656 CTATCGTCCGCATCCTCCCC 61.879 65.000 0.00 0.00 0.00 4.81
2702 4632 0.894184 TCTATCGTCCGCATCCTCCC 60.894 60.000 0.00 0.00 0.00 4.30
2703 4633 0.523966 CTCTATCGTCCGCATCCTCC 59.476 60.000 0.00 0.00 0.00 4.30
2704 4634 0.523966 CCTCTATCGTCCGCATCCTC 59.476 60.000 0.00 0.00 0.00 3.71
2705 4635 1.528292 GCCTCTATCGTCCGCATCCT 61.528 60.000 0.00 0.00 0.00 3.24
2715 4645 3.201290 ACTTGATGCTTTGCCTCTATCG 58.799 45.455 0.00 0.00 0.00 2.92
2734 4664 7.205515 AGACCTCCATAGATTTCATCAAACT 57.794 36.000 0.00 0.00 0.00 2.66
2898 4836 3.312890 CTCCCATCTGTCATCCCTTAGT 58.687 50.000 0.00 0.00 0.00 2.24
2954 4893 1.501582 AGGCACTGGTATCTCCCTTC 58.498 55.000 0.00 0.00 37.18 3.46
3080 5019 6.293081 CCGGTTATTCATCTCAGCTATGTTTG 60.293 42.308 0.00 0.00 0.00 2.93
3168 5107 6.939132 AGGTTCTCATGATTAAATCTGCTG 57.061 37.500 0.00 0.00 0.00 4.41
3230 5169 8.599624 ACCATCCAAATGATATTGTTCTTCTT 57.400 30.769 0.00 0.00 34.61 2.52
3317 5260 2.380660 GAGAGCAAGATTAGCGAGACG 58.619 52.381 0.00 0.00 37.01 4.18
3338 5281 4.457466 TGTCCCTTAGTTTCAACCAACTC 58.543 43.478 0.00 0.00 38.07 3.01
3357 5300 7.066645 GGTAAACCAAAGGGAAGTGTATATGTC 59.933 40.741 0.00 0.00 38.05 3.06
3362 5305 4.041938 TCGGTAAACCAAAGGGAAGTGTAT 59.958 41.667 0.00 0.00 38.05 2.29
3370 5313 2.554370 TGAGTCGGTAAACCAAAGGG 57.446 50.000 0.00 0.00 41.29 3.95
3415 5358 1.126846 CTTTCAACAGATGTCGTCGCC 59.873 52.381 0.00 0.00 0.00 5.54
3506 5465 7.869800 TCGCTCTACATATAGCATATCATCAG 58.130 38.462 0.00 0.00 38.70 2.90
3509 5468 8.634335 ATCTCGCTCTACATATAGCATATCAT 57.366 34.615 0.00 0.00 38.70 2.45
3510 5469 9.732130 ATATCTCGCTCTACATATAGCATATCA 57.268 33.333 0.00 0.00 38.70 2.15
3516 5475 9.123709 GCAAATATATCTCGCTCTACATATAGC 57.876 37.037 0.00 0.00 35.33 2.97
3519 5478 8.140628 CCAGCAAATATATCTCGCTCTACATAT 58.859 37.037 1.58 0.00 0.00 1.78
3577 5536 1.813178 CTACGGTCTCTCAAGCTGTGA 59.187 52.381 0.00 0.00 34.17 3.58
3656 5615 9.646427 AACAAGTAAGCAAATAGTTTGAAACAA 57.354 25.926 11.02 0.00 43.26 2.83
3848 5814 6.718454 ACAGTTCAAGATTCTCGAGAATTG 57.282 37.500 34.71 29.69 44.14 2.32
3850 5816 6.696411 AGAACAGTTCAAGATTCTCGAGAAT 58.304 36.000 34.89 34.89 46.54 2.40
3875 5841 9.357652 CTCGAAAATTTACATGACCAATGATTT 57.642 29.630 0.00 0.00 38.72 2.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.