Multiple sequence alignment - TraesCS7B01G410100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G410100 chr7B 100.000 3613 0 0 1 3613 679358611 679362223 0.000000e+00 6673
1 TraesCS7B01G410100 chr7B 92.349 928 62 5 2688 3613 485605784 485606704 0.000000e+00 1312
2 TraesCS7B01G410100 chr7B 89.960 757 52 13 1 740 150843079 150843828 0.000000e+00 955
3 TraesCS7B01G410100 chr6D 84.184 1391 188 14 1031 2404 451894047 451895422 0.000000e+00 1321
4 TraesCS7B01G410100 chr6B 84.127 1386 187 16 1031 2396 686363750 686365122 0.000000e+00 1310
5 TraesCS7B01G410100 chr6A 83.774 1362 187 22 1061 2401 597788433 597789781 0.000000e+00 1260
6 TraesCS7B01G410100 chr4D 92.388 762 37 7 1 743 116523597 116522838 0.000000e+00 1066
7 TraesCS7B01G410100 chr4D 90.909 759 48 7 1 740 442391522 442392278 0.000000e+00 1000
8 TraesCS7B01G410100 chr4D 90.814 762 49 8 1 743 493970146 493969387 0.000000e+00 1000
9 TraesCS7B01G410100 chr4D 89.804 765 48 12 1 740 56942517 56943276 0.000000e+00 953
10 TraesCS7B01G410100 chr4D 89.895 762 41 9 1 743 508925642 508926386 0.000000e+00 948
11 TraesCS7B01G410100 chr3A 91.831 759 42 8 1 740 418764695 418763938 0.000000e+00 1040
12 TraesCS7B01G410100 chr1D 91.536 768 42 11 1 746 429021111 429021877 0.000000e+00 1037
13 TraesCS7B01G410100 chr1D 90.895 637 37 5 2692 3327 113598810 113599426 0.000000e+00 835
14 TraesCS7B01G410100 chr3D 91.293 758 46 5 1 739 515007575 515008331 0.000000e+00 1016
15 TraesCS7B01G410100 chr3D 90.909 759 52 9 1 743 6530002 6529245 0.000000e+00 1003
16 TraesCS7B01G410100 chr3D 90.814 762 50 8 1 743 515988023 515987263 0.000000e+00 1002
17 TraesCS7B01G410100 chr3D 88.427 769 54 15 1 744 6288585 6289343 0.000000e+00 894
18 TraesCS7B01G410100 chr2B 90.117 769 48 14 1 743 488004717 488003951 0.000000e+00 974
19 TraesCS7B01G410100 chr2B 79.129 1332 234 31 1073 2377 713940330 713939016 0.000000e+00 880
20 TraesCS7B01G410100 chr2B 78.405 1329 246 26 1073 2374 713791116 713792430 0.000000e+00 826
21 TraesCS7B01G410100 chr5D 89.007 755 42 13 1 736 460217164 460217896 0.000000e+00 896
22 TraesCS7B01G410100 chr5D 88.069 637 41 5 2691 3299 332409831 332409202 0.000000e+00 723
23 TraesCS7B01G410100 chr2A 79.261 1326 240 27 1073 2377 724018456 724017145 0.000000e+00 893
24 TraesCS7B01G410100 chr2A 89.057 265 24 2 3351 3613 765962100 765962361 1.250000e-84 324
25 TraesCS7B01G410100 chr2A 92.105 228 14 3 2842 3068 765960246 765960470 5.820000e-83 318
26 TraesCS7B01G410100 chr2A 86.638 232 21 2 3062 3293 765961880 765962101 7.750000e-62 248
27 TraesCS7B01G410100 chr5B 87.633 752 65 10 1 727 93207055 93207803 0.000000e+00 848
28 TraesCS7B01G410100 chr2D 78.679 1332 243 32 1073 2377 589684839 589683522 0.000000e+00 848
29 TraesCS7B01G410100 chr2D 78.254 1329 248 30 1073 2374 589522769 589524083 0.000000e+00 815
30 TraesCS7B01G410100 chr2D 78.441 1257 232 26 1144 2374 589282371 589283614 0.000000e+00 784
31 TraesCS7B01G410100 chr2D 93.269 416 26 2 1 415 314344931 314344517 2.380000e-171 612
32 TraesCS7B01G410100 chr5A 91.482 587 43 3 2691 3276 433202756 433202176 0.000000e+00 800
33 TraesCS7B01G410100 chr7D 90.039 512 32 7 1 493 556477392 556477903 0.000000e+00 645
34 TraesCS7B01G410100 chr1A 89.227 362 34 3 2974 3335 120845628 120845984 7.120000e-122 448
35 TraesCS7B01G410100 chr1A 86.989 269 31 2 2713 2980 120380180 120380445 2.110000e-77 300


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G410100 chr7B 679358611 679362223 3612 False 6673.000000 6673 100.000000 1 3613 1 chr7B.!!$F3 3612
1 TraesCS7B01G410100 chr7B 485605784 485606704 920 False 1312.000000 1312 92.349000 2688 3613 1 chr7B.!!$F2 925
2 TraesCS7B01G410100 chr7B 150843079 150843828 749 False 955.000000 955 89.960000 1 740 1 chr7B.!!$F1 739
3 TraesCS7B01G410100 chr6D 451894047 451895422 1375 False 1321.000000 1321 84.184000 1031 2404 1 chr6D.!!$F1 1373
4 TraesCS7B01G410100 chr6B 686363750 686365122 1372 False 1310.000000 1310 84.127000 1031 2396 1 chr6B.!!$F1 1365
5 TraesCS7B01G410100 chr6A 597788433 597789781 1348 False 1260.000000 1260 83.774000 1061 2401 1 chr6A.!!$F1 1340
6 TraesCS7B01G410100 chr4D 116522838 116523597 759 True 1066.000000 1066 92.388000 1 743 1 chr4D.!!$R1 742
7 TraesCS7B01G410100 chr4D 442391522 442392278 756 False 1000.000000 1000 90.909000 1 740 1 chr4D.!!$F2 739
8 TraesCS7B01G410100 chr4D 493969387 493970146 759 True 1000.000000 1000 90.814000 1 743 1 chr4D.!!$R2 742
9 TraesCS7B01G410100 chr4D 56942517 56943276 759 False 953.000000 953 89.804000 1 740 1 chr4D.!!$F1 739
10 TraesCS7B01G410100 chr4D 508925642 508926386 744 False 948.000000 948 89.895000 1 743 1 chr4D.!!$F3 742
11 TraesCS7B01G410100 chr3A 418763938 418764695 757 True 1040.000000 1040 91.831000 1 740 1 chr3A.!!$R1 739
12 TraesCS7B01G410100 chr1D 429021111 429021877 766 False 1037.000000 1037 91.536000 1 746 1 chr1D.!!$F2 745
13 TraesCS7B01G410100 chr1D 113598810 113599426 616 False 835.000000 835 90.895000 2692 3327 1 chr1D.!!$F1 635
14 TraesCS7B01G410100 chr3D 515007575 515008331 756 False 1016.000000 1016 91.293000 1 739 1 chr3D.!!$F2 738
15 TraesCS7B01G410100 chr3D 6529245 6530002 757 True 1003.000000 1003 90.909000 1 743 1 chr3D.!!$R1 742
16 TraesCS7B01G410100 chr3D 515987263 515988023 760 True 1002.000000 1002 90.814000 1 743 1 chr3D.!!$R2 742
17 TraesCS7B01G410100 chr3D 6288585 6289343 758 False 894.000000 894 88.427000 1 744 1 chr3D.!!$F1 743
18 TraesCS7B01G410100 chr2B 488003951 488004717 766 True 974.000000 974 90.117000 1 743 1 chr2B.!!$R1 742
19 TraesCS7B01G410100 chr2B 713939016 713940330 1314 True 880.000000 880 79.129000 1073 2377 1 chr2B.!!$R2 1304
20 TraesCS7B01G410100 chr2B 713791116 713792430 1314 False 826.000000 826 78.405000 1073 2374 1 chr2B.!!$F1 1301
21 TraesCS7B01G410100 chr5D 460217164 460217896 732 False 896.000000 896 89.007000 1 736 1 chr5D.!!$F1 735
22 TraesCS7B01G410100 chr5D 332409202 332409831 629 True 723.000000 723 88.069000 2691 3299 1 chr5D.!!$R1 608
23 TraesCS7B01G410100 chr2A 724017145 724018456 1311 True 893.000000 893 79.261000 1073 2377 1 chr2A.!!$R1 1304
24 TraesCS7B01G410100 chr2A 765960246 765962361 2115 False 296.666667 324 89.266667 2842 3613 3 chr2A.!!$F1 771
25 TraesCS7B01G410100 chr5B 93207055 93207803 748 False 848.000000 848 87.633000 1 727 1 chr5B.!!$F1 726
26 TraesCS7B01G410100 chr2D 589683522 589684839 1317 True 848.000000 848 78.679000 1073 2377 1 chr2D.!!$R2 1304
27 TraesCS7B01G410100 chr2D 589522769 589524083 1314 False 815.000000 815 78.254000 1073 2374 1 chr2D.!!$F2 1301
28 TraesCS7B01G410100 chr2D 589282371 589283614 1243 False 784.000000 784 78.441000 1144 2374 1 chr2D.!!$F1 1230
29 TraesCS7B01G410100 chr5A 433202176 433202756 580 True 800.000000 800 91.482000 2691 3276 1 chr5A.!!$R1 585
30 TraesCS7B01G410100 chr7D 556477392 556477903 511 False 645.000000 645 90.039000 1 493 1 chr7D.!!$F1 492

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
991 1056 0.034477 ACTCCTTGTTTATGCCGGGG 60.034 55.0 2.18 0.0 0.00 5.73 F
2562 2677 0.029300 GCATTGTGTGCGTGAGTGTT 59.971 50.0 0.00 0.0 45.23 3.32 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2583 2698 0.034380 AGGCGACTGACCTGTAGCTA 60.034 55.0 0.0 0.0 41.13 3.32 R
3387 4960 0.966179 TGCACTGGAAGAGTCGCTTA 59.034 50.0 0.0 0.0 36.83 3.09 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.346426 ATCCTTGCACCGAAGCTTT 57.654 47.368 0.00 0.00 34.99 3.51
62 63 2.108157 ACCAAGCACTTCGTCGCA 59.892 55.556 0.00 0.00 0.00 5.10
93 94 2.213499 AGTTCAAGCTGAGGAACAACG 58.787 47.619 21.25 0.00 44.46 4.10
132 133 1.069978 TGACGGTGAAGCTGATGAACA 59.930 47.619 0.00 0.00 0.00 3.18
380 412 3.889196 TGGTTTATGCGTTGAACTGTC 57.111 42.857 0.00 0.00 0.00 3.51
395 427 7.253354 CGTTGAACTGTCTGAACTATCGTTATC 60.253 40.741 0.00 0.00 32.39 1.75
415 459 8.627428 CGTTATCATGTGTCGTACTATGTTATG 58.373 37.037 0.00 0.00 0.00 1.90
416 460 8.912658 GTTATCATGTGTCGTACTATGTTATGG 58.087 37.037 0.00 0.00 0.00 2.74
418 462 4.049546 TGTGTCGTACTATGTTATGGGC 57.950 45.455 0.00 0.00 0.00 5.36
419 463 3.047796 GTGTCGTACTATGTTATGGGCG 58.952 50.000 0.00 0.00 0.00 6.13
422 466 3.488310 GTCGTACTATGTTATGGGCGTTG 59.512 47.826 0.00 0.00 0.00 4.10
423 467 3.380954 TCGTACTATGTTATGGGCGTTGA 59.619 43.478 0.00 0.00 0.00 3.18
449 512 5.917462 TGTTTATGCTCTGCTCTGCTTATA 58.083 37.500 0.00 0.00 0.00 0.98
470 533 2.719531 TGTGTGGTACATGGTTGTGT 57.280 45.000 0.00 0.00 44.52 3.72
561 626 2.744062 CCATGCCTTGGGTTTGTCA 58.256 52.632 0.00 0.00 42.33 3.58
603 668 2.965716 ACCAGGCAGTGTGGTTCTGC 62.966 60.000 9.07 9.07 46.73 4.26
744 809 1.933052 GCAACCAAACACGCCCATAAC 60.933 52.381 0.00 0.00 0.00 1.89
745 810 1.338337 CAACCAAACACGCCCATAACA 59.662 47.619 0.00 0.00 0.00 2.41
746 811 1.243902 ACCAAACACGCCCATAACAG 58.756 50.000 0.00 0.00 0.00 3.16
747 812 0.109319 CCAAACACGCCCATAACAGC 60.109 55.000 0.00 0.00 0.00 4.40
748 813 0.881118 CAAACACGCCCATAACAGCT 59.119 50.000 0.00 0.00 0.00 4.24
749 814 1.135689 CAAACACGCCCATAACAGCTC 60.136 52.381 0.00 0.00 0.00 4.09
750 815 0.324943 AACACGCCCATAACAGCTCT 59.675 50.000 0.00 0.00 0.00 4.09
751 816 0.324943 ACACGCCCATAACAGCTCTT 59.675 50.000 0.00 0.00 0.00 2.85
752 817 1.271379 ACACGCCCATAACAGCTCTTT 60.271 47.619 0.00 0.00 0.00 2.52
753 818 2.027561 ACACGCCCATAACAGCTCTTTA 60.028 45.455 0.00 0.00 0.00 1.85
754 819 3.006940 CACGCCCATAACAGCTCTTTAA 58.993 45.455 0.00 0.00 0.00 1.52
755 820 3.438781 CACGCCCATAACAGCTCTTTAAA 59.561 43.478 0.00 0.00 0.00 1.52
756 821 4.076394 ACGCCCATAACAGCTCTTTAAAA 58.924 39.130 0.00 0.00 0.00 1.52
757 822 4.521256 ACGCCCATAACAGCTCTTTAAAAA 59.479 37.500 0.00 0.00 0.00 1.94
758 823 4.857037 CGCCCATAACAGCTCTTTAAAAAC 59.143 41.667 0.00 0.00 0.00 2.43
759 824 5.335661 CGCCCATAACAGCTCTTTAAAAACT 60.336 40.000 0.00 0.00 0.00 2.66
760 825 5.863935 GCCCATAACAGCTCTTTAAAAACTG 59.136 40.000 9.20 9.20 0.00 3.16
761 826 6.294508 GCCCATAACAGCTCTTTAAAAACTGA 60.295 38.462 15.10 0.00 32.67 3.41
762 827 7.657336 CCCATAACAGCTCTTTAAAAACTGAA 58.343 34.615 15.10 6.48 32.67 3.02
763 828 8.306761 CCCATAACAGCTCTTTAAAAACTGAAT 58.693 33.333 15.10 7.92 32.67 2.57
764 829 9.696917 CCATAACAGCTCTTTAAAAACTGAATT 57.303 29.630 15.10 6.09 32.67 2.17
768 833 8.225603 ACAGCTCTTTAAAAACTGAATTCTCA 57.774 30.769 15.10 0.00 32.67 3.27
769 834 8.686334 ACAGCTCTTTAAAAACTGAATTCTCAA 58.314 29.630 15.10 0.00 32.67 3.02
770 835 9.520204 CAGCTCTTTAAAAACTGAATTCTCAAA 57.480 29.630 7.05 0.00 0.00 2.69
797 862 4.066710 CTTGTTTTAGCTACAAGGCGAC 57.933 45.455 16.83 0.00 45.46 5.19
798 863 2.419667 TGTTTTAGCTACAAGGCGACC 58.580 47.619 0.00 0.00 37.29 4.79
799 864 1.392510 GTTTTAGCTACAAGGCGACCG 59.607 52.381 0.00 0.00 37.29 4.79
800 865 0.889994 TTTAGCTACAAGGCGACCGA 59.110 50.000 0.00 0.00 37.29 4.69
801 866 0.171903 TTAGCTACAAGGCGACCGAC 59.828 55.000 0.00 0.00 37.29 4.79
802 867 0.679002 TAGCTACAAGGCGACCGACT 60.679 55.000 0.00 0.00 37.29 4.18
803 868 0.679002 AGCTACAAGGCGACCGACTA 60.679 55.000 0.00 0.00 37.29 2.59
804 869 0.171903 GCTACAAGGCGACCGACTAA 59.828 55.000 0.00 0.00 30.17 2.24
805 870 1.202382 GCTACAAGGCGACCGACTAAT 60.202 52.381 0.00 0.00 30.17 1.73
806 871 2.737679 GCTACAAGGCGACCGACTAATT 60.738 50.000 0.00 0.00 30.17 1.40
807 872 1.722011 ACAAGGCGACCGACTAATTG 58.278 50.000 0.00 0.00 30.17 2.32
808 873 1.274167 ACAAGGCGACCGACTAATTGA 59.726 47.619 0.00 0.00 30.17 2.57
809 874 2.093658 ACAAGGCGACCGACTAATTGAT 60.094 45.455 0.00 0.00 30.17 2.57
810 875 2.936498 CAAGGCGACCGACTAATTGATT 59.064 45.455 0.00 0.00 30.17 2.57
811 876 4.116961 CAAGGCGACCGACTAATTGATTA 58.883 43.478 0.00 0.00 30.17 1.75
812 877 4.395959 AGGCGACCGACTAATTGATTAA 57.604 40.909 0.00 0.00 0.00 1.40
813 878 4.957296 AGGCGACCGACTAATTGATTAAT 58.043 39.130 0.00 0.00 0.00 1.40
814 879 4.750098 AGGCGACCGACTAATTGATTAATG 59.250 41.667 0.00 0.00 0.00 1.90
815 880 4.748102 GGCGACCGACTAATTGATTAATGA 59.252 41.667 0.00 0.00 0.00 2.57
816 881 5.408604 GGCGACCGACTAATTGATTAATGAT 59.591 40.000 0.00 0.00 0.00 2.45
817 882 6.588756 GGCGACCGACTAATTGATTAATGATA 59.411 38.462 0.00 0.00 0.00 2.15
818 883 7.411588 GGCGACCGACTAATTGATTAATGATAC 60.412 40.741 0.00 0.00 0.00 2.24
819 884 7.328737 GCGACCGACTAATTGATTAATGATACT 59.671 37.037 0.00 0.00 0.00 2.12
820 885 9.836076 CGACCGACTAATTGATTAATGATACTA 57.164 33.333 0.00 0.00 0.00 1.82
867 932 8.558973 TGGAAAATATTGGTAAATGCAAAAGG 57.441 30.769 0.00 0.00 0.00 3.11
868 933 7.120432 TGGAAAATATTGGTAAATGCAAAAGGC 59.880 33.333 0.00 0.00 45.13 4.35
869 934 7.336679 GGAAAATATTGGTAAATGCAAAAGGCT 59.663 33.333 0.00 0.00 45.15 4.58
870 935 7.614124 AAATATTGGTAAATGCAAAAGGCTG 57.386 32.000 0.00 0.00 45.15 4.85
871 936 4.622260 ATTGGTAAATGCAAAAGGCTGT 57.378 36.364 0.00 0.00 45.15 4.40
872 937 3.383620 TGGTAAATGCAAAAGGCTGTG 57.616 42.857 0.00 0.00 45.15 3.66
873 938 2.036992 TGGTAAATGCAAAAGGCTGTGG 59.963 45.455 0.00 0.00 45.15 4.17
874 939 2.612721 GGTAAATGCAAAAGGCTGTGGG 60.613 50.000 0.00 0.00 45.15 4.61
875 940 1.422531 AAATGCAAAAGGCTGTGGGA 58.577 45.000 0.00 0.00 45.15 4.37
876 941 0.971386 AATGCAAAAGGCTGTGGGAG 59.029 50.000 0.00 0.00 45.15 4.30
877 942 0.901580 ATGCAAAAGGCTGTGGGAGG 60.902 55.000 0.00 0.00 45.15 4.30
892 957 4.488911 AGGCAGGCCCCTCGAGAT 62.489 66.667 15.71 0.00 36.58 2.75
893 958 2.524394 GGCAGGCCCCTCGAGATA 60.524 66.667 15.71 0.00 0.00 1.98
894 959 2.140792 GGCAGGCCCCTCGAGATAA 61.141 63.158 15.71 0.00 0.00 1.75
895 960 1.484444 GGCAGGCCCCTCGAGATAAT 61.484 60.000 15.71 0.00 0.00 1.28
896 961 0.036858 GCAGGCCCCTCGAGATAATC 60.037 60.000 15.71 0.00 0.00 1.75
897 962 1.342074 CAGGCCCCTCGAGATAATCA 58.658 55.000 15.71 0.00 0.00 2.57
898 963 1.905215 CAGGCCCCTCGAGATAATCAT 59.095 52.381 15.71 0.00 0.00 2.45
899 964 2.304180 CAGGCCCCTCGAGATAATCATT 59.696 50.000 15.71 0.00 0.00 2.57
900 965 2.982488 AGGCCCCTCGAGATAATCATTT 59.018 45.455 15.71 0.00 0.00 2.32
901 966 3.395941 AGGCCCCTCGAGATAATCATTTT 59.604 43.478 15.71 0.00 0.00 1.82
902 967 3.753797 GGCCCCTCGAGATAATCATTTTC 59.246 47.826 15.71 0.00 0.00 2.29
903 968 3.753797 GCCCCTCGAGATAATCATTTTCC 59.246 47.826 15.71 0.00 0.00 3.13
904 969 4.505742 GCCCCTCGAGATAATCATTTTCCT 60.506 45.833 15.71 0.00 0.00 3.36
905 970 5.625150 CCCCTCGAGATAATCATTTTCCTT 58.375 41.667 15.71 0.00 0.00 3.36
906 971 6.064717 CCCCTCGAGATAATCATTTTCCTTT 58.935 40.000 15.71 0.00 0.00 3.11
907 972 6.547510 CCCCTCGAGATAATCATTTTCCTTTT 59.452 38.462 15.71 0.00 0.00 2.27
908 973 7.420800 CCCTCGAGATAATCATTTTCCTTTTG 58.579 38.462 15.71 0.00 0.00 2.44
909 974 7.067494 CCCTCGAGATAATCATTTTCCTTTTGT 59.933 37.037 15.71 0.00 0.00 2.83
910 975 7.912250 CCTCGAGATAATCATTTTCCTTTTGTG 59.088 37.037 15.71 0.00 0.00 3.33
911 976 7.250569 TCGAGATAATCATTTTCCTTTTGTGC 58.749 34.615 0.00 0.00 0.00 4.57
912 977 7.121168 TCGAGATAATCATTTTCCTTTTGTGCT 59.879 33.333 0.00 0.00 0.00 4.40
913 978 7.756722 CGAGATAATCATTTTCCTTTTGTGCTT 59.243 33.333 0.00 0.00 0.00 3.91
926 991 9.906660 TTCCTTTTGTGCTTAATTAAGTATGTG 57.093 29.630 22.94 10.64 35.75 3.21
927 992 9.073475 TCCTTTTGTGCTTAATTAAGTATGTGT 57.927 29.630 22.94 0.00 35.75 3.72
928 993 9.128107 CCTTTTGTGCTTAATTAAGTATGTGTG 57.872 33.333 22.94 12.00 35.75 3.82
929 994 9.677567 CTTTTGTGCTTAATTAAGTATGTGTGT 57.322 29.630 22.94 0.00 35.75 3.72
930 995 9.457110 TTTTGTGCTTAATTAAGTATGTGTGTG 57.543 29.630 22.94 0.00 35.75 3.82
931 996 6.607689 TGTGCTTAATTAAGTATGTGTGTGC 58.392 36.000 22.94 8.89 35.75 4.57
932 997 6.205658 TGTGCTTAATTAAGTATGTGTGTGCA 59.794 34.615 22.94 11.07 35.75 4.57
933 998 7.081349 GTGCTTAATTAAGTATGTGTGTGCAA 58.919 34.615 22.94 0.00 35.75 4.08
934 999 7.593273 GTGCTTAATTAAGTATGTGTGTGCAAA 59.407 33.333 22.94 0.00 35.75 3.68
935 1000 7.807433 TGCTTAATTAAGTATGTGTGTGCAAAG 59.193 33.333 22.94 0.00 35.75 2.77
936 1001 7.201350 GCTTAATTAAGTATGTGTGTGCAAAGC 60.201 37.037 22.94 4.78 35.75 3.51
937 1002 5.703978 ATTAAGTATGTGTGTGCAAAGCA 57.296 34.783 0.00 0.00 35.60 3.91
938 1003 5.506686 TTAAGTATGTGTGTGCAAAGCAA 57.493 34.783 0.00 0.00 41.47 3.91
939 1004 3.354089 AGTATGTGTGTGCAAAGCAAC 57.646 42.857 0.00 0.00 41.47 4.17
940 1005 2.951642 AGTATGTGTGTGCAAAGCAACT 59.048 40.909 0.00 0.00 41.47 3.16
941 1006 2.212869 ATGTGTGTGCAAAGCAACTG 57.787 45.000 0.00 0.00 41.47 3.16
942 1007 0.458197 TGTGTGTGCAAAGCAACTGC 60.458 50.000 0.00 0.00 41.47 4.40
947 1012 3.349088 TGCAAAGCAACTGCAACTG 57.651 47.368 4.22 0.00 46.47 3.16
948 1013 0.816373 TGCAAAGCAACTGCAACTGA 59.184 45.000 4.22 0.00 46.47 3.41
949 1014 1.203065 GCAAAGCAACTGCAACTGAC 58.797 50.000 4.22 0.00 45.16 3.51
950 1015 1.202336 GCAAAGCAACTGCAACTGACT 60.202 47.619 4.22 0.00 45.16 3.41
951 1016 2.456989 CAAAGCAACTGCAACTGACTG 58.543 47.619 4.22 0.00 45.16 3.51
952 1017 1.027357 AAGCAACTGCAACTGACTGG 58.973 50.000 4.22 0.00 45.16 4.00
953 1018 0.107017 AGCAACTGCAACTGACTGGT 60.107 50.000 4.22 0.00 45.16 4.00
954 1019 1.140852 AGCAACTGCAACTGACTGGTA 59.859 47.619 4.22 0.00 45.16 3.25
955 1020 1.532868 GCAACTGCAACTGACTGGTAG 59.467 52.381 0.00 0.00 41.59 3.18
956 1021 2.838736 CAACTGCAACTGACTGGTAGT 58.161 47.619 0.00 0.00 0.00 2.73
957 1022 3.802329 GCAACTGCAACTGACTGGTAGTA 60.802 47.826 0.00 0.00 41.59 1.82
958 1023 4.569943 CAACTGCAACTGACTGGTAGTAT 58.430 43.478 0.00 0.00 0.00 2.12
959 1024 4.891992 ACTGCAACTGACTGGTAGTATT 57.108 40.909 0.00 0.00 0.00 1.89
960 1025 5.995565 ACTGCAACTGACTGGTAGTATTA 57.004 39.130 0.00 0.00 0.00 0.98
961 1026 5.967088 ACTGCAACTGACTGGTAGTATTAG 58.033 41.667 0.00 0.00 0.00 1.73
962 1027 5.480772 ACTGCAACTGACTGGTAGTATTAGT 59.519 40.000 0.00 0.00 0.00 2.24
963 1028 6.662234 ACTGCAACTGACTGGTAGTATTAGTA 59.338 38.462 0.00 0.00 0.00 1.82
964 1029 7.342284 ACTGCAACTGACTGGTAGTATTAGTAT 59.658 37.037 0.00 0.00 0.00 2.12
965 1030 8.756486 TGCAACTGACTGGTAGTATTAGTATA 57.244 34.615 0.00 0.00 0.00 1.47
966 1031 9.363401 TGCAACTGACTGGTAGTATTAGTATAT 57.637 33.333 0.00 0.00 0.00 0.86
986 1051 9.877178 AGTATATATAGCACTCCTTGTTTATGC 57.123 33.333 0.00 0.00 36.52 3.14
987 1052 9.099454 GTATATATAGCACTCCTTGTTTATGCC 57.901 37.037 0.00 0.00 36.96 4.40
988 1053 1.453155 AGCACTCCTTGTTTATGCCG 58.547 50.000 0.00 0.00 36.96 5.69
989 1054 0.451783 GCACTCCTTGTTTATGCCGG 59.548 55.000 0.00 0.00 0.00 6.13
990 1055 1.094785 CACTCCTTGTTTATGCCGGG 58.905 55.000 2.18 0.00 0.00 5.73
991 1056 0.034477 ACTCCTTGTTTATGCCGGGG 60.034 55.000 2.18 0.00 0.00 5.73
992 1057 0.254747 CTCCTTGTTTATGCCGGGGA 59.745 55.000 2.18 0.00 0.00 4.81
993 1058 0.699399 TCCTTGTTTATGCCGGGGAA 59.301 50.000 2.18 0.00 0.00 3.97
994 1059 1.286553 TCCTTGTTTATGCCGGGGAAT 59.713 47.619 2.18 0.00 0.00 3.01
995 1060 1.681264 CCTTGTTTATGCCGGGGAATC 59.319 52.381 2.18 0.00 0.00 2.52
996 1061 2.374184 CTTGTTTATGCCGGGGAATCA 58.626 47.619 2.18 0.00 0.00 2.57
997 1062 2.746279 TGTTTATGCCGGGGAATCAT 57.254 45.000 2.18 0.00 0.00 2.45
998 1063 2.582052 TGTTTATGCCGGGGAATCATC 58.418 47.619 2.18 0.00 0.00 2.92
999 1064 1.886542 GTTTATGCCGGGGAATCATCC 59.113 52.381 2.18 0.00 45.77 3.51
1009 1074 0.595095 GGAATCATCCAATCGCCAGC 59.405 55.000 0.00 0.00 45.79 4.85
1010 1075 0.595095 GAATCATCCAATCGCCAGCC 59.405 55.000 0.00 0.00 0.00 4.85
1011 1076 0.184451 AATCATCCAATCGCCAGCCT 59.816 50.000 0.00 0.00 0.00 4.58
1012 1077 0.250640 ATCATCCAATCGCCAGCCTC 60.251 55.000 0.00 0.00 0.00 4.70
1013 1078 1.895707 CATCCAATCGCCAGCCTCC 60.896 63.158 0.00 0.00 0.00 4.30
1014 1079 2.074948 ATCCAATCGCCAGCCTCCT 61.075 57.895 0.00 0.00 0.00 3.69
1015 1080 1.639635 ATCCAATCGCCAGCCTCCTT 61.640 55.000 0.00 0.00 0.00 3.36
1016 1081 2.117156 CCAATCGCCAGCCTCCTTG 61.117 63.158 0.00 0.00 0.00 3.61
1017 1082 1.377725 CAATCGCCAGCCTCCTTGT 60.378 57.895 0.00 0.00 0.00 3.16
1018 1083 0.107703 CAATCGCCAGCCTCCTTGTA 60.108 55.000 0.00 0.00 0.00 2.41
1019 1084 0.839946 AATCGCCAGCCTCCTTGTAT 59.160 50.000 0.00 0.00 0.00 2.29
1020 1085 0.839946 ATCGCCAGCCTCCTTGTATT 59.160 50.000 0.00 0.00 0.00 1.89
1021 1086 0.178068 TCGCCAGCCTCCTTGTATTC 59.822 55.000 0.00 0.00 0.00 1.75
1022 1087 0.107703 CGCCAGCCTCCTTGTATTCA 60.108 55.000 0.00 0.00 0.00 2.57
1023 1088 1.475751 CGCCAGCCTCCTTGTATTCAT 60.476 52.381 0.00 0.00 0.00 2.57
1024 1089 1.952296 GCCAGCCTCCTTGTATTCATG 59.048 52.381 0.00 0.00 0.00 3.07
1025 1090 1.952296 CCAGCCTCCTTGTATTCATGC 59.048 52.381 0.00 0.00 0.00 4.06
1026 1091 1.600957 CAGCCTCCTTGTATTCATGCG 59.399 52.381 0.00 0.00 0.00 4.73
1027 1092 1.210478 AGCCTCCTTGTATTCATGCGT 59.790 47.619 0.00 0.00 0.00 5.24
1028 1093 2.017049 GCCTCCTTGTATTCATGCGTT 58.983 47.619 0.00 0.00 0.00 4.84
1029 1094 2.223340 GCCTCCTTGTATTCATGCGTTG 60.223 50.000 0.00 0.00 0.00 4.10
1059 1125 5.628606 ACTTCTTTCTTAGCTTCGTACGTTC 59.371 40.000 16.05 5.66 0.00 3.95
1067 1134 1.467713 GCTTCGTACGTTCAGCTAGCT 60.468 52.381 12.68 12.68 0.00 3.32
1069 1136 1.445871 TCGTACGTTCAGCTAGCTCA 58.554 50.000 16.15 0.00 0.00 4.26
1088 1155 3.774066 TCAGTATGAAGATCACAGTGCG 58.226 45.455 0.00 0.00 45.97 5.34
1142 1212 4.864334 CCACCTGATGGCTCCGGC 62.864 72.222 0.00 0.00 43.24 6.13
1179 1249 0.927537 CGCTCACAGTGTTCGACAAA 59.072 50.000 10.33 0.00 0.00 2.83
1193 1263 1.531149 CGACAAAGCCAACTTCGACAT 59.469 47.619 0.00 0.00 34.05 3.06
1203 1273 0.598562 ACTTCGACATGCACGTCTCT 59.401 50.000 11.60 0.00 33.54 3.10
1227 1297 2.527123 TACGCCTTCCACCCACCA 60.527 61.111 0.00 0.00 0.00 4.17
1368 1441 3.176578 GGTGCGCGATTCGTCGAA 61.177 61.111 12.10 10.61 41.07 3.71
1480 1562 1.296392 CTGTTGATCCAGGCCACGA 59.704 57.895 5.01 0.00 0.00 4.35
1488 1570 4.680237 CAGGCCACGAGGTTCGCA 62.680 66.667 5.01 0.00 45.12 5.10
1517 1599 2.738521 CGTCGTTGGCCTGACTGG 60.739 66.667 17.34 0.00 39.35 4.00
1539 1621 2.342279 CACATGGTCACCGACGGT 59.658 61.111 15.37 15.37 35.62 4.83
1602 1684 4.115199 GGCGCCTCCATTGACCCT 62.115 66.667 22.15 0.00 34.01 4.34
1617 1699 2.665000 CCTGTCCCAGTGCACGAT 59.335 61.111 12.01 0.00 0.00 3.73
1634 1716 1.677637 GATCGGCCGTCCTTCTTCCT 61.678 60.000 27.15 0.00 0.00 3.36
1670 1752 4.036498 GCTTAAGATAGAGTACGAGCACCA 59.964 45.833 6.67 0.00 0.00 4.17
1672 1754 3.000684 AGATAGAGTACGAGCACCACA 57.999 47.619 0.00 0.00 0.00 4.17
1675 1757 1.179174 AGAGTACGAGCACCACAGCA 61.179 55.000 0.00 0.00 36.85 4.41
1704 1786 1.881252 GCCATACGACGACCGCAAT 60.881 57.895 0.00 0.00 43.32 3.56
1705 1787 0.595567 GCCATACGACGACCGCAATA 60.596 55.000 0.00 0.00 43.32 1.90
1706 1788 1.405461 CCATACGACGACCGCAATAG 58.595 55.000 0.00 0.00 43.32 1.73
1707 1789 1.268896 CCATACGACGACCGCAATAGT 60.269 52.381 0.00 0.00 43.32 2.12
1709 1791 2.737467 TACGACGACCGCAATAGTAC 57.263 50.000 0.00 0.00 43.32 2.73
1710 1792 0.247814 ACGACGACCGCAATAGTACG 60.248 55.000 0.00 0.00 43.32 3.67
1749 1855 0.041386 AGGTGGTGGTAGAGAGGGTC 59.959 60.000 0.00 0.00 0.00 4.46
1758 1864 2.557901 GGTAGAGAGGGTCCACTTCAGT 60.558 54.545 0.00 0.00 0.00 3.41
1759 1865 3.308976 GGTAGAGAGGGTCCACTTCAGTA 60.309 52.174 0.00 0.00 0.00 2.74
1773 1879 1.190643 TCAGTATGGACCACATCGCA 58.809 50.000 0.00 0.00 41.03 5.10
1776 1882 2.746904 CAGTATGGACCACATCGCAAAA 59.253 45.455 0.00 0.00 41.03 2.44
1895 2010 4.129737 CCTCGATGGGCGTGACGT 62.130 66.667 6.91 0.00 41.80 4.34
1906 2021 2.726274 GTGACGTCACCGGTCTGT 59.274 61.111 33.62 2.65 40.85 3.41
2149 2264 4.314440 TGGTGCCGACTGCTGACC 62.314 66.667 0.00 0.00 42.00 4.02
2220 2335 3.772025 GGATCCCGTTCTATGATCTGGAT 59.228 47.826 0.00 0.00 36.12 3.41
2227 2342 3.264922 TCTATGATCTGGATCTGGGCA 57.735 47.619 11.23 0.00 38.60 5.36
2265 2380 3.016971 ATGCCCAGCTACCTGCCA 61.017 61.111 0.00 0.00 44.23 4.92
2274 2389 1.306141 CTACCTGCCAGTGGAGGGA 60.306 63.158 23.56 17.76 33.16 4.20
2292 2407 3.083997 GGGGTCATCCTCGTGCCT 61.084 66.667 0.00 0.00 35.33 4.75
2300 2415 1.757118 CATCCTCGTGCCTTCCTTCTA 59.243 52.381 0.00 0.00 0.00 2.10
2301 2416 2.160721 TCCTCGTGCCTTCCTTCTAT 57.839 50.000 0.00 0.00 0.00 1.98
2319 2434 4.241555 GGCGATGGGAGCGTGGAT 62.242 66.667 0.00 0.00 35.00 3.41
2334 2449 2.590092 GATGCCTACGTGCCCCTT 59.410 61.111 0.00 0.00 0.00 3.95
2401 2516 4.711846 GCCTCCCCAAACTCTGATTTTTAT 59.288 41.667 0.00 0.00 0.00 1.40
2402 2517 5.163509 GCCTCCCCAAACTCTGATTTTTATC 60.164 44.000 0.00 0.00 0.00 1.75
2405 2520 4.097892 CCCCAAACTCTGATTTTTATCCCG 59.902 45.833 0.00 0.00 0.00 5.14
2406 2521 4.097892 CCCAAACTCTGATTTTTATCCCGG 59.902 45.833 0.00 0.00 0.00 5.73
2407 2522 4.097892 CCAAACTCTGATTTTTATCCCGGG 59.902 45.833 16.85 16.85 0.00 5.73
2408 2523 4.855298 AACTCTGATTTTTATCCCGGGA 57.145 40.909 29.18 29.18 0.00 5.14
2409 2524 5.388599 AACTCTGATTTTTATCCCGGGAT 57.611 39.130 37.31 37.31 38.54 3.85
2410 2525 5.388599 ACTCTGATTTTTATCCCGGGATT 57.611 39.130 40.00 22.90 36.17 3.01
2411 2526 5.133221 ACTCTGATTTTTATCCCGGGATTG 58.867 41.667 40.00 18.77 36.17 2.67
2412 2527 5.124036 TCTGATTTTTATCCCGGGATTGT 57.876 39.130 40.00 21.09 36.17 2.71
2413 2528 6.126594 ACTCTGATTTTTATCCCGGGATTGTA 60.127 38.462 40.00 21.03 36.17 2.41
2414 2529 6.664714 TCTGATTTTTATCCCGGGATTGTAA 58.335 36.000 40.00 28.09 36.17 2.41
2415 2530 6.544564 TCTGATTTTTATCCCGGGATTGTAAC 59.455 38.462 40.00 24.91 36.17 2.50
2416 2531 6.428295 TGATTTTTATCCCGGGATTGTAACT 58.572 36.000 40.00 23.40 36.17 2.24
2417 2532 6.544564 TGATTTTTATCCCGGGATTGTAACTC 59.455 38.462 40.00 28.54 36.17 3.01
2418 2533 5.703730 TTTTATCCCGGGATTGTAACTCT 57.296 39.130 40.00 17.05 36.17 3.24
2419 2534 4.950205 TTATCCCGGGATTGTAACTCTC 57.050 45.455 40.00 0.00 36.17 3.20
2420 2535 2.241281 TCCCGGGATTGTAACTCTCA 57.759 50.000 22.63 0.00 0.00 3.27
2421 2536 2.108168 TCCCGGGATTGTAACTCTCAG 58.892 52.381 22.63 0.00 0.00 3.35
2422 2537 1.831736 CCCGGGATTGTAACTCTCAGT 59.168 52.381 18.48 0.00 0.00 3.41
2423 2538 2.159085 CCCGGGATTGTAACTCTCAGTC 60.159 54.545 18.48 0.00 0.00 3.51
2424 2539 2.496070 CCGGGATTGTAACTCTCAGTCA 59.504 50.000 0.00 0.00 0.00 3.41
2425 2540 3.429547 CCGGGATTGTAACTCTCAGTCAG 60.430 52.174 0.00 0.00 0.00 3.51
2426 2541 3.193691 CGGGATTGTAACTCTCAGTCAGT 59.806 47.826 0.00 0.00 0.00 3.41
2427 2542 4.675671 CGGGATTGTAACTCTCAGTCAGTC 60.676 50.000 0.00 0.00 0.00 3.51
2428 2543 4.220821 GGGATTGTAACTCTCAGTCAGTCA 59.779 45.833 0.00 0.00 0.00 3.41
2429 2544 5.279506 GGGATTGTAACTCTCAGTCAGTCAA 60.280 44.000 0.00 0.00 0.00 3.18
2430 2545 6.402222 GGATTGTAACTCTCAGTCAGTCAAT 58.598 40.000 0.00 0.00 0.00 2.57
2431 2546 6.312426 GGATTGTAACTCTCAGTCAGTCAATG 59.688 42.308 0.00 0.00 0.00 2.82
2432 2547 4.560128 TGTAACTCTCAGTCAGTCAATGC 58.440 43.478 0.00 0.00 0.00 3.56
2433 2548 2.360553 ACTCTCAGTCAGTCAATGCG 57.639 50.000 0.00 0.00 0.00 4.73
2434 2549 1.067283 ACTCTCAGTCAGTCAATGCGG 60.067 52.381 0.00 0.00 0.00 5.69
2435 2550 0.969149 TCTCAGTCAGTCAATGCGGT 59.031 50.000 0.00 0.00 0.00 5.68
2436 2551 2.164422 CTCTCAGTCAGTCAATGCGGTA 59.836 50.000 0.00 0.00 0.00 4.02
2437 2552 2.164422 TCTCAGTCAGTCAATGCGGTAG 59.836 50.000 0.00 0.00 0.00 3.18
2438 2553 1.002366 CAGTCAGTCAATGCGGTAGC 58.998 55.000 0.00 0.00 45.41 3.58
2439 2554 0.108138 AGTCAGTCAATGCGGTAGCC 60.108 55.000 0.00 0.00 44.33 3.93
2450 2565 1.360551 CGGTAGCCGTCTGATCTGG 59.639 63.158 0.00 0.00 42.73 3.86
2451 2566 1.384989 CGGTAGCCGTCTGATCTGGT 61.385 60.000 0.00 0.00 42.73 4.00
2452 2567 0.103208 GGTAGCCGTCTGATCTGGTG 59.897 60.000 0.00 0.00 0.00 4.17
2453 2568 0.528684 GTAGCCGTCTGATCTGGTGC 60.529 60.000 0.00 1.05 0.00 5.01
2454 2569 2.004808 TAGCCGTCTGATCTGGTGCG 62.005 60.000 0.00 3.13 0.00 5.34
2455 2570 2.885113 CCGTCTGATCTGGTGCGA 59.115 61.111 0.00 0.00 0.00 5.10
2456 2571 1.439228 CCGTCTGATCTGGTGCGAT 59.561 57.895 0.00 0.00 0.00 4.58
2457 2572 0.668535 CCGTCTGATCTGGTGCGATA 59.331 55.000 0.00 0.00 0.00 2.92
2458 2573 1.270826 CCGTCTGATCTGGTGCGATAT 59.729 52.381 0.00 0.00 0.00 1.63
2459 2574 2.323059 CGTCTGATCTGGTGCGATATG 58.677 52.381 0.00 0.00 0.00 1.78
2460 2575 2.030805 CGTCTGATCTGGTGCGATATGA 60.031 50.000 0.00 0.00 0.00 2.15
2461 2576 3.366781 CGTCTGATCTGGTGCGATATGAT 60.367 47.826 0.00 0.00 0.00 2.45
2462 2577 4.564041 GTCTGATCTGGTGCGATATGATT 58.436 43.478 0.00 0.00 0.00 2.57
2463 2578 4.624882 GTCTGATCTGGTGCGATATGATTC 59.375 45.833 0.00 0.00 0.00 2.52
2464 2579 3.578688 TGATCTGGTGCGATATGATTCG 58.421 45.455 0.00 0.00 41.99 3.34
2465 2580 3.005791 TGATCTGGTGCGATATGATTCGT 59.994 43.478 0.00 0.00 41.16 3.85
2466 2581 4.217550 TGATCTGGTGCGATATGATTCGTA 59.782 41.667 0.00 0.00 41.16 3.43
2471 2586 4.824848 GTGCGATATGATTCGTACCATC 57.175 45.455 4.11 0.00 45.28 3.51
2472 2587 4.486090 GTGCGATATGATTCGTACCATCT 58.514 43.478 4.11 0.00 45.28 2.90
2473 2588 4.923871 GTGCGATATGATTCGTACCATCTT 59.076 41.667 4.11 0.00 45.28 2.40
2474 2589 5.061064 GTGCGATATGATTCGTACCATCTTC 59.939 44.000 4.11 0.00 45.28 2.87
2475 2590 5.048013 TGCGATATGATTCGTACCATCTTCT 60.048 40.000 0.00 0.00 41.16 2.85
2476 2591 5.287274 GCGATATGATTCGTACCATCTTCTG 59.713 44.000 0.00 0.00 41.16 3.02
2477 2592 5.802451 CGATATGATTCGTACCATCTTCTGG 59.198 44.000 2.28 0.00 41.38 3.86
2478 2593 7.600640 CGATATGATTCGTACCATCTTCTGGC 61.601 46.154 2.28 0.00 40.30 4.85
2487 2602 3.680642 CCATCTTCTGGCGTTGTATTG 57.319 47.619 0.00 0.00 38.47 1.90
2488 2603 2.223340 CCATCTTCTGGCGTTGTATTGC 60.223 50.000 0.00 0.00 38.47 3.56
2489 2604 2.472695 TCTTCTGGCGTTGTATTGCT 57.527 45.000 0.00 0.00 0.00 3.91
2490 2605 2.778299 TCTTCTGGCGTTGTATTGCTT 58.222 42.857 0.00 0.00 0.00 3.91
2491 2606 3.146066 TCTTCTGGCGTTGTATTGCTTT 58.854 40.909 0.00 0.00 0.00 3.51
2492 2607 2.987413 TCTGGCGTTGTATTGCTTTG 57.013 45.000 0.00 0.00 0.00 2.77
2493 2608 1.539388 TCTGGCGTTGTATTGCTTTGG 59.461 47.619 0.00 0.00 0.00 3.28
2494 2609 1.269448 CTGGCGTTGTATTGCTTTGGT 59.731 47.619 0.00 0.00 0.00 3.67
2495 2610 1.000827 TGGCGTTGTATTGCTTTGGTG 60.001 47.619 0.00 0.00 0.00 4.17
2496 2611 1.668628 GGCGTTGTATTGCTTTGGTGG 60.669 52.381 0.00 0.00 0.00 4.61
2497 2612 1.000717 GCGTTGTATTGCTTTGGTGGT 60.001 47.619 0.00 0.00 0.00 4.16
2498 2613 2.920647 GCGTTGTATTGCTTTGGTGGTC 60.921 50.000 0.00 0.00 0.00 4.02
2499 2614 2.552315 CGTTGTATTGCTTTGGTGGTCT 59.448 45.455 0.00 0.00 0.00 3.85
2500 2615 3.004315 CGTTGTATTGCTTTGGTGGTCTT 59.996 43.478 0.00 0.00 0.00 3.01
2501 2616 4.546570 GTTGTATTGCTTTGGTGGTCTTC 58.453 43.478 0.00 0.00 0.00 2.87
2502 2617 4.098914 TGTATTGCTTTGGTGGTCTTCT 57.901 40.909 0.00 0.00 0.00 2.85
2503 2618 3.820467 TGTATTGCTTTGGTGGTCTTCTG 59.180 43.478 0.00 0.00 0.00 3.02
2504 2619 2.727123 TTGCTTTGGTGGTCTTCTGA 57.273 45.000 0.00 0.00 0.00 3.27
2505 2620 2.727123 TGCTTTGGTGGTCTTCTGAA 57.273 45.000 0.00 0.00 0.00 3.02
2506 2621 3.228188 TGCTTTGGTGGTCTTCTGAAT 57.772 42.857 0.00 0.00 0.00 2.57
2507 2622 2.886523 TGCTTTGGTGGTCTTCTGAATG 59.113 45.455 0.00 0.00 0.00 2.67
2508 2623 2.229784 GCTTTGGTGGTCTTCTGAATGG 59.770 50.000 0.00 0.00 0.00 3.16
2509 2624 1.909700 TTGGTGGTCTTCTGAATGGC 58.090 50.000 0.00 0.00 0.00 4.40
2510 2625 0.038166 TGGTGGTCTTCTGAATGGCC 59.962 55.000 0.00 0.00 0.00 5.36
2511 2626 0.329596 GGTGGTCTTCTGAATGGCCT 59.670 55.000 3.32 0.00 0.00 5.19
2512 2627 1.272147 GGTGGTCTTCTGAATGGCCTT 60.272 52.381 3.32 0.00 0.00 4.35
2513 2628 2.087646 GTGGTCTTCTGAATGGCCTTC 58.912 52.381 3.32 6.14 0.00 3.46
2514 2629 1.988107 TGGTCTTCTGAATGGCCTTCT 59.012 47.619 3.32 0.00 34.75 2.85
2515 2630 3.055094 GTGGTCTTCTGAATGGCCTTCTA 60.055 47.826 3.32 0.00 34.75 2.10
2516 2631 3.782523 TGGTCTTCTGAATGGCCTTCTAT 59.217 43.478 3.32 0.00 34.75 1.98
2517 2632 4.228210 TGGTCTTCTGAATGGCCTTCTATT 59.772 41.667 3.32 0.00 34.75 1.73
2518 2633 5.196695 GGTCTTCTGAATGGCCTTCTATTT 58.803 41.667 3.32 0.00 34.75 1.40
2519 2634 5.067023 GGTCTTCTGAATGGCCTTCTATTTG 59.933 44.000 3.32 0.00 34.75 2.32
2520 2635 5.649831 GTCTTCTGAATGGCCTTCTATTTGT 59.350 40.000 3.32 0.00 34.75 2.83
2521 2636 5.649395 TCTTCTGAATGGCCTTCTATTTGTG 59.351 40.000 3.32 0.00 34.75 3.33
2522 2637 3.696051 TCTGAATGGCCTTCTATTTGTGC 59.304 43.478 3.32 0.00 34.75 4.57
2523 2638 2.760092 TGAATGGCCTTCTATTTGTGCC 59.240 45.455 3.32 0.00 42.49 5.01
2524 2639 2.834638 ATGGCCTTCTATTTGTGCCT 57.165 45.000 3.32 0.00 42.62 4.75
2525 2640 2.603075 TGGCCTTCTATTTGTGCCTT 57.397 45.000 3.32 0.00 42.62 4.35
2526 2641 2.888212 TGGCCTTCTATTTGTGCCTTT 58.112 42.857 3.32 0.00 42.62 3.11
2527 2642 2.562298 TGGCCTTCTATTTGTGCCTTTG 59.438 45.455 3.32 0.00 42.62 2.77
2528 2643 2.562738 GGCCTTCTATTTGTGCCTTTGT 59.437 45.455 0.00 0.00 39.05 2.83
2529 2644 3.761752 GGCCTTCTATTTGTGCCTTTGTA 59.238 43.478 0.00 0.00 39.05 2.41
2530 2645 4.402474 GGCCTTCTATTTGTGCCTTTGTAT 59.598 41.667 0.00 0.00 39.05 2.29
2531 2646 5.343249 GCCTTCTATTTGTGCCTTTGTATG 58.657 41.667 0.00 0.00 0.00 2.39
2532 2647 5.343249 CCTTCTATTTGTGCCTTTGTATGC 58.657 41.667 0.00 0.00 0.00 3.14
2533 2648 5.105797 CCTTCTATTTGTGCCTTTGTATGCA 60.106 40.000 0.00 0.00 34.54 3.96
2539 2654 2.284754 TGCCTTTGTATGCACAAGGA 57.715 45.000 20.61 9.21 45.17 3.36
2540 2655 2.161855 TGCCTTTGTATGCACAAGGAG 58.838 47.619 20.61 2.07 45.17 3.69
2541 2656 2.224744 TGCCTTTGTATGCACAAGGAGA 60.225 45.455 20.61 9.28 45.17 3.71
2542 2657 3.019564 GCCTTTGTATGCACAAGGAGAT 58.980 45.455 20.61 0.00 45.17 2.75
2543 2658 3.181493 GCCTTTGTATGCACAAGGAGATG 60.181 47.826 20.61 3.45 45.17 2.90
2544 2659 3.181493 CCTTTGTATGCACAAGGAGATGC 60.181 47.826 14.95 0.00 45.17 3.91
2560 2675 4.520618 GCATTGTGTGCGTGAGTG 57.479 55.556 0.00 0.00 45.23 3.51
2561 2676 1.648720 GCATTGTGTGCGTGAGTGT 59.351 52.632 0.00 0.00 45.23 3.55
2562 2677 0.029300 GCATTGTGTGCGTGAGTGTT 59.971 50.000 0.00 0.00 45.23 3.32
2563 2678 1.533756 GCATTGTGTGCGTGAGTGTTT 60.534 47.619 0.00 0.00 45.23 2.83
2564 2679 2.796304 CATTGTGTGCGTGAGTGTTTT 58.204 42.857 0.00 0.00 0.00 2.43
2565 2680 2.254918 TTGTGTGCGTGAGTGTTTTG 57.745 45.000 0.00 0.00 0.00 2.44
2566 2681 1.443802 TGTGTGCGTGAGTGTTTTGA 58.556 45.000 0.00 0.00 0.00 2.69
2567 2682 1.807142 TGTGTGCGTGAGTGTTTTGAA 59.193 42.857 0.00 0.00 0.00 2.69
2568 2683 2.226674 TGTGTGCGTGAGTGTTTTGAAA 59.773 40.909 0.00 0.00 0.00 2.69
2569 2684 3.119673 TGTGTGCGTGAGTGTTTTGAAAT 60.120 39.130 0.00 0.00 0.00 2.17
2570 2685 3.857093 GTGTGCGTGAGTGTTTTGAAATT 59.143 39.130 0.00 0.00 0.00 1.82
2571 2686 4.326009 GTGTGCGTGAGTGTTTTGAAATTT 59.674 37.500 0.00 0.00 0.00 1.82
2572 2687 4.325741 TGTGCGTGAGTGTTTTGAAATTTG 59.674 37.500 0.00 0.00 0.00 2.32
2573 2688 4.326009 GTGCGTGAGTGTTTTGAAATTTGT 59.674 37.500 0.00 0.00 0.00 2.83
2574 2689 5.513495 GTGCGTGAGTGTTTTGAAATTTGTA 59.487 36.000 0.00 0.00 0.00 2.41
2575 2690 6.198216 GTGCGTGAGTGTTTTGAAATTTGTAT 59.802 34.615 0.00 0.00 0.00 2.29
2576 2691 6.754209 TGCGTGAGTGTTTTGAAATTTGTATT 59.246 30.769 0.00 0.00 0.00 1.89
2577 2692 7.276658 TGCGTGAGTGTTTTGAAATTTGTATTT 59.723 29.630 0.00 0.00 36.68 1.40
2578 2693 7.787480 GCGTGAGTGTTTTGAAATTTGTATTTC 59.213 33.333 0.00 0.00 46.42 2.17
2590 2705 8.889849 GAAATTTGTATTTCGCTTTAGCTACA 57.110 30.769 0.00 0.00 40.03 2.74
2591 2706 8.895932 AAATTTGTATTTCGCTTTAGCTACAG 57.104 30.769 2.34 2.34 39.32 2.74
2592 2707 6.417191 TTTGTATTTCGCTTTAGCTACAGG 57.583 37.500 8.92 0.00 39.32 4.00
2593 2708 5.080969 TGTATTTCGCTTTAGCTACAGGT 57.919 39.130 8.92 0.00 39.32 4.00
2594 2709 5.107133 TGTATTTCGCTTTAGCTACAGGTC 58.893 41.667 8.92 0.00 39.32 3.85
2595 2710 3.671008 TTTCGCTTTAGCTACAGGTCA 57.329 42.857 8.92 0.00 39.32 4.02
2596 2711 2.941453 TCGCTTTAGCTACAGGTCAG 57.059 50.000 8.92 0.00 39.32 3.51
2597 2712 2.168496 TCGCTTTAGCTACAGGTCAGT 58.832 47.619 8.92 0.00 39.32 3.41
2598 2713 2.163815 TCGCTTTAGCTACAGGTCAGTC 59.836 50.000 8.92 0.00 39.32 3.51
2599 2714 2.531206 GCTTTAGCTACAGGTCAGTCG 58.469 52.381 8.92 0.00 38.21 4.18
2600 2715 2.531206 CTTTAGCTACAGGTCAGTCGC 58.469 52.381 0.00 0.00 0.00 5.19
2601 2716 0.815734 TTAGCTACAGGTCAGTCGCC 59.184 55.000 0.00 0.00 31.19 5.54
2602 2717 0.034380 TAGCTACAGGTCAGTCGCCT 60.034 55.000 0.00 0.00 36.66 5.52
2617 2732 7.129109 TCAGTCGCCTGAAAAATTAAGTTAG 57.871 36.000 0.00 0.00 44.67 2.34
2618 2733 6.148811 TCAGTCGCCTGAAAAATTAAGTTAGG 59.851 38.462 0.00 0.00 44.67 2.69
2619 2734 5.414765 AGTCGCCTGAAAAATTAAGTTAGGG 59.585 40.000 5.39 0.30 0.00 3.53
2620 2735 5.182570 GTCGCCTGAAAAATTAAGTTAGGGT 59.817 40.000 5.39 0.00 0.00 4.34
2621 2736 5.413523 TCGCCTGAAAAATTAAGTTAGGGTC 59.586 40.000 5.39 0.00 0.00 4.46
2622 2737 5.182380 CGCCTGAAAAATTAAGTTAGGGTCA 59.818 40.000 5.39 0.11 0.00 4.02
2623 2738 6.387465 GCCTGAAAAATTAAGTTAGGGTCAC 58.613 40.000 5.39 0.00 0.00 3.67
2624 2739 6.208797 GCCTGAAAAATTAAGTTAGGGTCACT 59.791 38.462 5.39 0.00 0.00 3.41
2625 2740 7.392393 GCCTGAAAAATTAAGTTAGGGTCACTA 59.608 37.037 5.39 0.00 0.00 2.74
2626 2741 9.462606 CCTGAAAAATTAAGTTAGGGTCACTAT 57.537 33.333 0.00 0.00 0.00 2.12
2634 2749 9.682465 ATTAAGTTAGGGTCACTATCTTTTTCC 57.318 33.333 10.10 0.00 40.47 3.13
2635 2750 6.697641 AGTTAGGGTCACTATCTTTTTCCA 57.302 37.500 0.00 0.00 29.40 3.53
2636 2751 6.473758 AGTTAGGGTCACTATCTTTTTCCAC 58.526 40.000 0.00 0.00 29.40 4.02
2637 2752 6.272558 AGTTAGGGTCACTATCTTTTTCCACT 59.727 38.462 0.00 0.00 29.40 4.00
2638 2753 4.911390 AGGGTCACTATCTTTTTCCACTG 58.089 43.478 0.00 0.00 0.00 3.66
2639 2754 4.351111 AGGGTCACTATCTTTTTCCACTGT 59.649 41.667 0.00 0.00 0.00 3.55
2640 2755 5.070685 GGGTCACTATCTTTTTCCACTGTT 58.929 41.667 0.00 0.00 0.00 3.16
2641 2756 5.048713 GGGTCACTATCTTTTTCCACTGTTG 60.049 44.000 0.00 0.00 0.00 3.33
2642 2757 5.531287 GGTCACTATCTTTTTCCACTGTTGT 59.469 40.000 0.00 0.00 0.00 3.32
2643 2758 6.293462 GGTCACTATCTTTTTCCACTGTTGTC 60.293 42.308 0.00 0.00 0.00 3.18
2644 2759 6.483640 GTCACTATCTTTTTCCACTGTTGTCT 59.516 38.462 0.00 0.00 0.00 3.41
2645 2760 7.012421 GTCACTATCTTTTTCCACTGTTGTCTT 59.988 37.037 0.00 0.00 0.00 3.01
2646 2761 7.012327 TCACTATCTTTTTCCACTGTTGTCTTG 59.988 37.037 0.00 0.00 0.00 3.02
2647 2762 4.370364 TCTTTTTCCACTGTTGTCTTGC 57.630 40.909 0.00 0.00 0.00 4.01
2648 2763 3.130340 TCTTTTTCCACTGTTGTCTTGCC 59.870 43.478 0.00 0.00 0.00 4.52
2649 2764 2.136298 TTTCCACTGTTGTCTTGCCA 57.864 45.000 0.00 0.00 0.00 4.92
2650 2765 2.136298 TTCCACTGTTGTCTTGCCAA 57.864 45.000 0.00 0.00 0.00 4.52
2651 2766 2.363306 TCCACTGTTGTCTTGCCAAT 57.637 45.000 0.00 0.00 0.00 3.16
2652 2767 3.500448 TCCACTGTTGTCTTGCCAATA 57.500 42.857 0.00 0.00 0.00 1.90
2653 2768 3.146066 TCCACTGTTGTCTTGCCAATAC 58.854 45.455 0.00 0.00 0.00 1.89
2654 2769 3.149196 CCACTGTTGTCTTGCCAATACT 58.851 45.455 0.00 0.00 0.00 2.12
2655 2770 3.569701 CCACTGTTGTCTTGCCAATACTT 59.430 43.478 0.00 0.00 0.00 2.24
2656 2771 4.320494 CCACTGTTGTCTTGCCAATACTTC 60.320 45.833 0.00 0.00 0.00 3.01
2657 2772 3.821033 ACTGTTGTCTTGCCAATACTTCC 59.179 43.478 0.00 0.00 0.00 3.46
2658 2773 3.820467 CTGTTGTCTTGCCAATACTTCCA 59.180 43.478 0.00 0.00 0.00 3.53
2659 2774 3.820467 TGTTGTCTTGCCAATACTTCCAG 59.180 43.478 0.00 0.00 0.00 3.86
2660 2775 3.788227 TGTCTTGCCAATACTTCCAGT 57.212 42.857 0.00 0.00 0.00 4.00
2661 2776 4.098914 TGTCTTGCCAATACTTCCAGTT 57.901 40.909 0.00 0.00 0.00 3.16
2662 2777 5.235850 TGTCTTGCCAATACTTCCAGTTA 57.764 39.130 0.00 0.00 0.00 2.24
2663 2778 5.815581 TGTCTTGCCAATACTTCCAGTTAT 58.184 37.500 0.00 0.00 0.00 1.89
2664 2779 6.245408 TGTCTTGCCAATACTTCCAGTTATT 58.755 36.000 0.00 0.00 0.00 1.40
2665 2780 6.719370 TGTCTTGCCAATACTTCCAGTTATTT 59.281 34.615 0.00 0.00 0.00 1.40
2666 2781 7.232534 TGTCTTGCCAATACTTCCAGTTATTTT 59.767 33.333 0.00 0.00 0.00 1.82
2667 2782 8.088365 GTCTTGCCAATACTTCCAGTTATTTTT 58.912 33.333 0.00 0.00 0.00 1.94
2689 2804 2.629051 AGTTCCGCCAATACTTGTAGC 58.371 47.619 0.00 0.00 0.00 3.58
2724 2841 3.107642 ACACCCGAGCCTATTTATTCG 57.892 47.619 0.00 0.00 0.00 3.34
2750 2867 7.279981 GTCAAATGGAAAATTTTACATAGCCCC 59.720 37.037 25.45 10.77 40.75 5.80
2781 2898 2.589540 CCAGACATGGCGGCCTTA 59.410 61.111 21.46 0.00 40.52 2.69
2810 2927 8.854614 AAGATGTAAAGAGTTCTTAGCAATGT 57.145 30.769 0.00 0.00 34.61 2.71
2811 2928 8.854614 AGATGTAAAGAGTTCTTAGCAATGTT 57.145 30.769 0.00 0.00 34.61 2.71
2812 2929 9.944376 AGATGTAAAGAGTTCTTAGCAATGTTA 57.056 29.630 0.00 0.00 34.61 2.41
2916 3060 2.662535 ATGATCATGGAATTCCCGCA 57.337 45.000 21.90 12.17 37.93 5.69
2953 3097 3.494626 CCATAGCACGTACAACATCCATC 59.505 47.826 0.00 0.00 0.00 3.51
3031 3188 4.101119 GCCTCCCTACAAGTTATAGCTTCA 59.899 45.833 0.00 0.00 0.00 3.02
3032 3189 5.740513 GCCTCCCTACAAGTTATAGCTTCAG 60.741 48.000 0.00 0.50 0.00 3.02
3033 3190 5.277857 TCCCTACAAGTTATAGCTTCAGC 57.722 43.478 0.00 0.00 42.49 4.26
3034 3191 4.714802 TCCCTACAAGTTATAGCTTCAGCA 59.285 41.667 0.00 0.00 45.16 4.41
3101 4674 4.022329 CACCCAAAAATACTCCACCTTCAC 60.022 45.833 0.00 0.00 0.00 3.18
3142 4715 5.887598 TGCAGCACACCTATTATTCTGAAAT 59.112 36.000 0.00 0.00 0.00 2.17
3192 4765 1.214175 TGCTCCTTCAGTTGGTGGAAA 59.786 47.619 0.00 0.00 0.00 3.13
3235 4808 2.345244 CCAACTCCAGCAGCTCGT 59.655 61.111 0.00 0.00 0.00 4.18
3239 4812 1.548357 AACTCCAGCAGCTCGTGGAT 61.548 55.000 13.00 0.00 42.10 3.41
3299 4872 1.234821 CTTGGCAGTAGCAAACGGAA 58.765 50.000 0.00 0.00 44.61 4.30
3304 4877 2.595386 GCAGTAGCAAACGGAATTTGG 58.405 47.619 1.89 0.00 46.73 3.28
3380 4953 7.220740 TGTGACAATCACCTTCACATAGTTTA 58.779 34.615 6.51 0.00 46.40 2.01
3401 4974 7.606456 AGTTTATTTCATTAAGCGACTCTTCCA 59.394 33.333 0.00 0.00 36.25 3.53
3459 5034 4.196971 CACAGCTTGATCTGATCATGGAA 58.803 43.478 25.69 11.19 39.39 3.53
3488 5063 4.015872 TCCACAAGTATCCAAACACTCC 57.984 45.455 0.00 0.00 0.00 3.85
3489 5064 3.392947 TCCACAAGTATCCAAACACTCCA 59.607 43.478 0.00 0.00 0.00 3.86
3512 5087 2.646930 CCATCCTACATTCAAGCAGCA 58.353 47.619 0.00 0.00 0.00 4.41
3531 5106 5.124457 GCAGCAAATGTCTCCAAGAATCTTA 59.876 40.000 0.00 0.00 0.00 2.10
3585 5160 5.012239 AGTTGCCATATTTCTGTGATGTGT 58.988 37.500 0.00 0.00 0.00 3.72
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 1.134521 ACGAAGTGCTTGGTGAAGTCA 60.135 47.619 0.00 0.00 42.51 3.41
62 63 1.006102 CTTGAACTCCGTCGGCACT 60.006 57.895 6.34 0.00 0.00 4.40
93 94 4.154347 CCTCCAGGAGCAGCCGTC 62.154 72.222 11.57 0.00 43.43 4.79
153 154 4.338710 GGCGTAGGTGGCCCAACA 62.339 66.667 0.00 0.00 44.97 3.33
257 258 0.539438 TGTTGACCACCTCAATGCCC 60.539 55.000 0.00 0.00 41.10 5.36
395 427 4.447724 GCCCATAACATAGTACGACACATG 59.552 45.833 0.00 0.00 0.00 3.21
415 459 1.539827 AGCATAAACAGTTCAACGCCC 59.460 47.619 0.00 0.00 0.00 6.13
416 460 2.484264 AGAGCATAAACAGTTCAACGCC 59.516 45.455 0.00 0.00 0.00 5.68
418 462 3.187227 AGCAGAGCATAAACAGTTCAACG 59.813 43.478 0.00 0.00 0.00 4.10
419 463 4.453819 AGAGCAGAGCATAAACAGTTCAAC 59.546 41.667 0.00 0.00 0.00 3.18
422 466 3.181512 GCAGAGCAGAGCATAAACAGTTC 60.182 47.826 0.00 0.00 0.00 3.01
423 467 2.746362 GCAGAGCAGAGCATAAACAGTT 59.254 45.455 0.00 0.00 0.00 3.16
449 512 3.561143 ACACAACCATGTACCACACATT 58.439 40.909 0.00 0.00 46.01 2.71
470 533 2.171659 TGAGGTTACCAGCACACTTCAA 59.828 45.455 3.51 0.00 0.00 2.69
561 626 1.993956 TGGTTGCCTGCATGTTAGTT 58.006 45.000 0.00 0.00 0.00 2.24
603 668 2.441532 CCTCTTGCCTGCATGGGG 60.442 66.667 9.27 9.27 35.77 4.96
744 809 9.520204 TTTGAGAATTCAGTTTTTAAAGAGCTG 57.480 29.630 8.44 8.52 34.15 4.24
777 842 2.809696 GGTCGCCTTGTAGCTAAAACAA 59.190 45.455 0.00 0.00 35.61 2.83
778 843 2.419667 GGTCGCCTTGTAGCTAAAACA 58.580 47.619 0.00 0.00 0.00 2.83
779 844 1.392510 CGGTCGCCTTGTAGCTAAAAC 59.607 52.381 0.00 0.00 0.00 2.43
780 845 1.273048 TCGGTCGCCTTGTAGCTAAAA 59.727 47.619 0.00 0.00 0.00 1.52
781 846 0.889994 TCGGTCGCCTTGTAGCTAAA 59.110 50.000 0.00 0.00 0.00 1.85
782 847 0.171903 GTCGGTCGCCTTGTAGCTAA 59.828 55.000 0.00 0.00 0.00 3.09
783 848 0.679002 AGTCGGTCGCCTTGTAGCTA 60.679 55.000 0.00 0.00 0.00 3.32
784 849 0.679002 TAGTCGGTCGCCTTGTAGCT 60.679 55.000 0.00 0.00 0.00 3.32
785 850 0.171903 TTAGTCGGTCGCCTTGTAGC 59.828 55.000 0.00 0.00 0.00 3.58
786 851 2.858344 CAATTAGTCGGTCGCCTTGTAG 59.142 50.000 0.00 0.00 0.00 2.74
787 852 2.492881 TCAATTAGTCGGTCGCCTTGTA 59.507 45.455 0.00 0.00 0.00 2.41
788 853 1.274167 TCAATTAGTCGGTCGCCTTGT 59.726 47.619 0.00 0.00 0.00 3.16
789 854 2.004583 TCAATTAGTCGGTCGCCTTG 57.995 50.000 0.00 0.00 0.00 3.61
790 855 2.981859 ATCAATTAGTCGGTCGCCTT 57.018 45.000 0.00 0.00 0.00 4.35
791 856 2.981859 AATCAATTAGTCGGTCGCCT 57.018 45.000 0.00 0.00 0.00 5.52
792 857 4.748102 TCATTAATCAATTAGTCGGTCGCC 59.252 41.667 0.00 0.00 0.00 5.54
793 858 5.900339 TCATTAATCAATTAGTCGGTCGC 57.100 39.130 0.00 0.00 0.00 5.19
794 859 8.744008 AGTATCATTAATCAATTAGTCGGTCG 57.256 34.615 0.00 0.00 0.00 4.79
841 906 9.176460 CCTTTTGCATTTACCAATATTTTCCAT 57.824 29.630 0.00 0.00 0.00 3.41
842 907 7.120432 GCCTTTTGCATTTACCAATATTTTCCA 59.880 33.333 0.00 0.00 40.77 3.53
843 908 7.336679 AGCCTTTTGCATTTACCAATATTTTCC 59.663 33.333 0.00 0.00 44.83 3.13
844 909 8.177013 CAGCCTTTTGCATTTACCAATATTTTC 58.823 33.333 0.00 0.00 44.83 2.29
845 910 7.665145 ACAGCCTTTTGCATTTACCAATATTTT 59.335 29.630 0.00 0.00 44.83 1.82
846 911 7.119553 CACAGCCTTTTGCATTTACCAATATTT 59.880 33.333 0.00 0.00 44.83 1.40
847 912 6.594937 CACAGCCTTTTGCATTTACCAATATT 59.405 34.615 0.00 0.00 44.83 1.28
848 913 6.108015 CACAGCCTTTTGCATTTACCAATAT 58.892 36.000 0.00 0.00 44.83 1.28
849 914 5.477510 CACAGCCTTTTGCATTTACCAATA 58.522 37.500 0.00 0.00 44.83 1.90
850 915 4.317488 CACAGCCTTTTGCATTTACCAAT 58.683 39.130 0.00 0.00 44.83 3.16
851 916 3.494048 CCACAGCCTTTTGCATTTACCAA 60.494 43.478 0.00 0.00 44.83 3.67
852 917 2.036992 CCACAGCCTTTTGCATTTACCA 59.963 45.455 0.00 0.00 44.83 3.25
853 918 2.612721 CCCACAGCCTTTTGCATTTACC 60.613 50.000 0.00 0.00 44.83 2.85
854 919 2.298729 TCCCACAGCCTTTTGCATTTAC 59.701 45.455 0.00 0.00 44.83 2.01
855 920 2.562298 CTCCCACAGCCTTTTGCATTTA 59.438 45.455 0.00 0.00 44.83 1.40
856 921 1.345415 CTCCCACAGCCTTTTGCATTT 59.655 47.619 0.00 0.00 44.83 2.32
857 922 0.971386 CTCCCACAGCCTTTTGCATT 59.029 50.000 0.00 0.00 44.83 3.56
858 923 0.901580 CCTCCCACAGCCTTTTGCAT 60.902 55.000 0.00 0.00 44.83 3.96
859 924 1.531365 CCTCCCACAGCCTTTTGCA 60.531 57.895 0.00 0.00 44.83 4.08
860 925 2.935740 GCCTCCCACAGCCTTTTGC 61.936 63.158 0.00 0.00 41.71 3.68
861 926 1.530013 CTGCCTCCCACAGCCTTTTG 61.530 60.000 0.00 0.00 0.00 2.44
862 927 1.228675 CTGCCTCCCACAGCCTTTT 60.229 57.895 0.00 0.00 0.00 2.27
863 928 2.437897 CTGCCTCCCACAGCCTTT 59.562 61.111 0.00 0.00 0.00 3.11
864 929 3.655211 CCTGCCTCCCACAGCCTT 61.655 66.667 0.00 0.00 33.65 4.35
875 940 2.605535 TTATCTCGAGGGGCCTGCCT 62.606 60.000 13.56 0.00 36.10 4.75
876 941 1.484444 ATTATCTCGAGGGGCCTGCC 61.484 60.000 13.56 0.00 0.00 4.85
877 942 0.036858 GATTATCTCGAGGGGCCTGC 60.037 60.000 13.56 0.00 0.00 4.85
878 943 1.342074 TGATTATCTCGAGGGGCCTG 58.658 55.000 13.56 0.00 0.00 4.85
879 944 2.334006 ATGATTATCTCGAGGGGCCT 57.666 50.000 13.56 0.00 0.00 5.19
880 945 3.425162 AAATGATTATCTCGAGGGGCC 57.575 47.619 13.56 0.00 0.00 5.80
881 946 3.753797 GGAAAATGATTATCTCGAGGGGC 59.246 47.826 13.56 0.00 0.00 5.80
882 947 5.234466 AGGAAAATGATTATCTCGAGGGG 57.766 43.478 13.56 0.00 0.00 4.79
883 948 7.067494 ACAAAAGGAAAATGATTATCTCGAGGG 59.933 37.037 13.56 0.00 0.00 4.30
884 949 7.912250 CACAAAAGGAAAATGATTATCTCGAGG 59.088 37.037 13.56 0.00 0.00 4.63
885 950 7.430502 GCACAAAAGGAAAATGATTATCTCGAG 59.569 37.037 5.93 5.93 0.00 4.04
886 951 7.121168 AGCACAAAAGGAAAATGATTATCTCGA 59.879 33.333 0.00 0.00 0.00 4.04
887 952 7.253422 AGCACAAAAGGAAAATGATTATCTCG 58.747 34.615 0.00 0.00 0.00 4.04
888 953 8.992835 AAGCACAAAAGGAAAATGATTATCTC 57.007 30.769 0.00 0.00 0.00 2.75
900 965 9.906660 CACATACTTAATTAAGCACAAAAGGAA 57.093 29.630 22.45 0.00 36.79 3.36
901 966 9.073475 ACACATACTTAATTAAGCACAAAAGGA 57.927 29.630 22.45 0.00 36.79 3.36
902 967 9.128107 CACACATACTTAATTAAGCACAAAAGG 57.872 33.333 22.45 9.26 36.79 3.11
903 968 9.677567 ACACACATACTTAATTAAGCACAAAAG 57.322 29.630 22.45 11.94 36.79 2.27
904 969 9.457110 CACACACATACTTAATTAAGCACAAAA 57.543 29.630 22.45 4.74 36.79 2.44
905 970 7.593273 GCACACACATACTTAATTAAGCACAAA 59.407 33.333 22.45 6.28 36.79 2.83
906 971 7.081349 GCACACACATACTTAATTAAGCACAA 58.919 34.615 22.45 8.46 36.79 3.33
907 972 6.205658 TGCACACACATACTTAATTAAGCACA 59.794 34.615 22.45 10.37 36.79 4.57
908 973 6.607689 TGCACACACATACTTAATTAAGCAC 58.392 36.000 22.45 0.00 36.79 4.40
909 974 6.809630 TGCACACACATACTTAATTAAGCA 57.190 33.333 22.45 12.38 36.79 3.91
910 975 7.201350 GCTTTGCACACACATACTTAATTAAGC 60.201 37.037 22.45 8.15 36.79 3.09
911 976 7.807433 TGCTTTGCACACACATACTTAATTAAG 59.193 33.333 21.21 21.21 34.88 1.85
912 977 7.652727 TGCTTTGCACACACATACTTAATTAA 58.347 30.769 0.00 0.00 31.71 1.40
913 978 7.208225 TGCTTTGCACACACATACTTAATTA 57.792 32.000 0.00 0.00 31.71 1.40
914 979 6.083098 TGCTTTGCACACACATACTTAATT 57.917 33.333 0.00 0.00 31.71 1.40
915 980 5.703978 TGCTTTGCACACACATACTTAAT 57.296 34.783 0.00 0.00 31.71 1.40
916 981 5.067153 AGTTGCTTTGCACACACATACTTAA 59.933 36.000 0.00 0.00 38.71 1.85
917 982 4.578516 AGTTGCTTTGCACACACATACTTA 59.421 37.500 0.00 0.00 38.71 2.24
918 983 3.381272 AGTTGCTTTGCACACACATACTT 59.619 39.130 0.00 0.00 38.71 2.24
919 984 2.951642 AGTTGCTTTGCACACACATACT 59.048 40.909 0.00 0.00 38.71 2.12
920 985 3.044986 CAGTTGCTTTGCACACACATAC 58.955 45.455 0.00 0.00 38.71 2.39
921 986 2.543445 GCAGTTGCTTTGCACACACATA 60.543 45.455 0.00 0.00 38.71 2.29
922 987 1.803625 GCAGTTGCTTTGCACACACAT 60.804 47.619 0.00 0.00 38.71 3.21
923 988 0.458197 GCAGTTGCTTTGCACACACA 60.458 50.000 0.00 0.00 38.71 3.72
924 989 0.458197 TGCAGTTGCTTTGCACACAC 60.458 50.000 5.62 0.00 45.89 3.82
925 990 1.888736 TGCAGTTGCTTTGCACACA 59.111 47.368 5.62 0.00 45.89 3.72
926 991 4.810730 TGCAGTTGCTTTGCACAC 57.189 50.000 5.62 0.00 45.89 3.82
930 995 1.202336 AGTCAGTTGCAGTTGCTTTGC 60.202 47.619 5.62 1.48 42.66 3.68
931 996 2.456989 CAGTCAGTTGCAGTTGCTTTG 58.543 47.619 5.62 1.91 42.66 2.77
932 997 1.406539 CCAGTCAGTTGCAGTTGCTTT 59.593 47.619 5.62 0.00 42.66 3.51
933 998 1.027357 CCAGTCAGTTGCAGTTGCTT 58.973 50.000 5.62 0.00 42.66 3.91
934 999 0.107017 ACCAGTCAGTTGCAGTTGCT 60.107 50.000 5.62 0.00 42.66 3.91
935 1000 1.532868 CTACCAGTCAGTTGCAGTTGC 59.467 52.381 0.00 0.00 42.50 4.17
936 1001 2.838736 ACTACCAGTCAGTTGCAGTTG 58.161 47.619 0.00 0.00 0.00 3.16
937 1002 4.891992 ATACTACCAGTCAGTTGCAGTT 57.108 40.909 0.00 0.00 0.00 3.16
938 1003 4.891992 AATACTACCAGTCAGTTGCAGT 57.108 40.909 0.00 0.00 0.00 4.40
939 1004 5.967088 ACTAATACTACCAGTCAGTTGCAG 58.033 41.667 0.00 0.00 0.00 4.41
940 1005 5.995565 ACTAATACTACCAGTCAGTTGCA 57.004 39.130 0.00 0.00 0.00 4.08
960 1025 9.877178 GCATAAACAAGGAGTGCTATATATACT 57.123 33.333 0.00 0.75 33.25 2.12
961 1026 9.099454 GGCATAAACAAGGAGTGCTATATATAC 57.901 37.037 0.00 0.00 36.15 1.47
962 1027 7.979537 CGGCATAAACAAGGAGTGCTATATATA 59.020 37.037 0.00 0.00 36.15 0.86
963 1028 6.818644 CGGCATAAACAAGGAGTGCTATATAT 59.181 38.462 0.00 0.00 36.15 0.86
964 1029 6.163476 CGGCATAAACAAGGAGTGCTATATA 58.837 40.000 0.00 0.00 36.15 0.86
965 1030 4.997395 CGGCATAAACAAGGAGTGCTATAT 59.003 41.667 0.00 0.00 36.15 0.86
966 1031 4.377021 CGGCATAAACAAGGAGTGCTATA 58.623 43.478 0.00 0.00 36.15 1.31
967 1032 3.206150 CGGCATAAACAAGGAGTGCTAT 58.794 45.455 0.00 0.00 36.15 2.97
968 1033 2.627945 CGGCATAAACAAGGAGTGCTA 58.372 47.619 0.00 0.00 36.15 3.49
969 1034 1.453155 CGGCATAAACAAGGAGTGCT 58.547 50.000 0.00 0.00 36.15 4.40
970 1035 0.451783 CCGGCATAAACAAGGAGTGC 59.548 55.000 0.00 0.00 35.17 4.40
971 1036 1.094785 CCCGGCATAAACAAGGAGTG 58.905 55.000 0.00 0.00 0.00 3.51
972 1037 0.034477 CCCCGGCATAAACAAGGAGT 60.034 55.000 0.00 0.00 0.00 3.85
973 1038 0.254747 TCCCCGGCATAAACAAGGAG 59.745 55.000 0.00 0.00 0.00 3.69
974 1039 0.699399 TTCCCCGGCATAAACAAGGA 59.301 50.000 0.00 0.00 0.00 3.36
975 1040 1.681264 GATTCCCCGGCATAAACAAGG 59.319 52.381 0.00 0.00 0.00 3.61
976 1041 2.374184 TGATTCCCCGGCATAAACAAG 58.626 47.619 0.00 0.00 0.00 3.16
977 1042 2.516227 TGATTCCCCGGCATAAACAA 57.484 45.000 0.00 0.00 0.00 2.83
978 1043 2.582052 GATGATTCCCCGGCATAAACA 58.418 47.619 0.00 0.00 0.00 2.83
979 1044 1.886542 GGATGATTCCCCGGCATAAAC 59.113 52.381 0.00 0.00 35.84 2.01
980 1045 1.496857 TGGATGATTCCCCGGCATAAA 59.503 47.619 0.00 0.00 41.83 1.40
981 1046 1.144691 TGGATGATTCCCCGGCATAA 58.855 50.000 0.00 0.00 41.83 1.90
982 1047 1.144691 TTGGATGATTCCCCGGCATA 58.855 50.000 0.00 0.00 41.83 3.14
983 1048 0.484212 ATTGGATGATTCCCCGGCAT 59.516 50.000 0.00 0.00 41.83 4.40
984 1049 0.178992 GATTGGATGATTCCCCGGCA 60.179 55.000 0.00 0.00 41.83 5.69
985 1050 1.237285 CGATTGGATGATTCCCCGGC 61.237 60.000 0.00 0.00 41.83 6.13
986 1051 1.237285 GCGATTGGATGATTCCCCGG 61.237 60.000 0.00 0.00 41.83 5.73
987 1052 1.237285 GGCGATTGGATGATTCCCCG 61.237 60.000 0.00 0.00 41.83 5.73
988 1053 0.178992 TGGCGATTGGATGATTCCCC 60.179 55.000 0.00 0.00 41.83 4.81
989 1054 1.242076 CTGGCGATTGGATGATTCCC 58.758 55.000 0.00 0.00 41.83 3.97
990 1055 0.595095 GCTGGCGATTGGATGATTCC 59.405 55.000 0.00 0.00 42.94 3.01
991 1056 0.595095 GGCTGGCGATTGGATGATTC 59.405 55.000 0.00 0.00 0.00 2.52
992 1057 0.184451 AGGCTGGCGATTGGATGATT 59.816 50.000 0.00 0.00 0.00 2.57
993 1058 0.250640 GAGGCTGGCGATTGGATGAT 60.251 55.000 0.00 0.00 0.00 2.45
994 1059 1.146930 GAGGCTGGCGATTGGATGA 59.853 57.895 0.00 0.00 0.00 2.92
995 1060 1.895707 GGAGGCTGGCGATTGGATG 60.896 63.158 0.00 0.00 0.00 3.51
996 1061 1.639635 AAGGAGGCTGGCGATTGGAT 61.640 55.000 0.00 0.00 0.00 3.41
997 1062 2.300967 AAGGAGGCTGGCGATTGGA 61.301 57.895 0.00 0.00 0.00 3.53
998 1063 2.117156 CAAGGAGGCTGGCGATTGG 61.117 63.158 0.00 0.00 0.00 3.16
999 1064 0.107703 TACAAGGAGGCTGGCGATTG 60.108 55.000 0.00 12.17 0.00 2.67
1000 1065 0.839946 ATACAAGGAGGCTGGCGATT 59.160 50.000 0.00 0.00 0.00 3.34
1001 1066 0.839946 AATACAAGGAGGCTGGCGAT 59.160 50.000 0.00 0.00 0.00 4.58
1002 1067 0.178068 GAATACAAGGAGGCTGGCGA 59.822 55.000 0.00 0.00 0.00 5.54
1003 1068 0.107703 TGAATACAAGGAGGCTGGCG 60.108 55.000 0.00 0.00 0.00 5.69
1004 1069 1.952296 CATGAATACAAGGAGGCTGGC 59.048 52.381 0.00 0.00 0.00 4.85
1005 1070 1.952296 GCATGAATACAAGGAGGCTGG 59.048 52.381 0.00 0.00 0.00 4.85
1006 1071 1.600957 CGCATGAATACAAGGAGGCTG 59.399 52.381 0.00 0.00 0.00 4.85
1007 1072 1.210478 ACGCATGAATACAAGGAGGCT 59.790 47.619 0.00 0.00 0.00 4.58
1008 1073 1.668419 ACGCATGAATACAAGGAGGC 58.332 50.000 0.00 0.00 0.00 4.70
1009 1074 2.355756 CCAACGCATGAATACAAGGAGG 59.644 50.000 0.00 0.00 0.00 4.30
1010 1075 3.009723 ACCAACGCATGAATACAAGGAG 58.990 45.455 0.00 0.00 0.00 3.69
1011 1076 2.746904 CACCAACGCATGAATACAAGGA 59.253 45.455 0.00 0.00 0.00 3.36
1012 1077 2.731968 GCACCAACGCATGAATACAAGG 60.732 50.000 0.00 0.00 0.00 3.61
1013 1078 2.095314 TGCACCAACGCATGAATACAAG 60.095 45.455 0.00 0.00 36.86 3.16
1014 1079 1.882623 TGCACCAACGCATGAATACAA 59.117 42.857 0.00 0.00 36.86 2.41
1015 1080 1.528129 TGCACCAACGCATGAATACA 58.472 45.000 0.00 0.00 36.86 2.29
1016 1081 2.250188 GTTGCACCAACGCATGAATAC 58.750 47.619 0.00 0.00 42.62 1.89
1017 1082 2.627863 GTTGCACCAACGCATGAATA 57.372 45.000 0.00 0.00 42.62 1.75
1018 1083 3.495124 GTTGCACCAACGCATGAAT 57.505 47.368 0.00 0.00 42.62 2.57
1026 1091 4.036852 AGCTAAGAAAGAAGTTGCACCAAC 59.963 41.667 0.00 0.00 43.83 3.77
1027 1092 4.207165 AGCTAAGAAAGAAGTTGCACCAA 58.793 39.130 0.00 0.00 0.00 3.67
1028 1093 3.820557 AGCTAAGAAAGAAGTTGCACCA 58.179 40.909 0.00 0.00 0.00 4.17
1029 1094 4.611581 CGAAGCTAAGAAAGAAGTTGCACC 60.612 45.833 0.00 0.00 0.00 5.01
1037 1102 5.522456 TGAACGTACGAAGCTAAGAAAGAA 58.478 37.500 24.41 0.00 0.00 2.52
1039 1105 4.201504 GCTGAACGTACGAAGCTAAGAAAG 60.202 45.833 24.41 5.51 32.82 2.62
1059 1125 5.221204 TGTGATCTTCATACTGAGCTAGCTG 60.221 44.000 24.99 11.60 0.00 4.24
1067 1134 3.429410 CCGCACTGTGATCTTCATACTGA 60.429 47.826 12.86 0.00 0.00 3.41
1069 1136 2.497675 ACCGCACTGTGATCTTCATACT 59.502 45.455 12.86 0.00 0.00 2.12
1088 1155 2.019984 GCTTGATGGACTTGGATGACC 58.980 52.381 0.00 0.00 0.00 4.02
1179 1249 1.568612 CGTGCATGTCGAAGTTGGCT 61.569 55.000 0.00 0.00 0.00 4.75
1193 1263 1.130561 CGTAGATGACAGAGACGTGCA 59.869 52.381 0.00 0.00 0.00 4.57
1203 1273 0.535335 GGTGGAAGGCGTAGATGACA 59.465 55.000 0.00 0.00 0.00 3.58
1234 1304 1.753078 CCTCGAGGACGTCATGGGA 60.753 63.158 28.21 9.02 40.69 4.37
1237 1307 2.105128 GGCCTCGAGGACGTCATG 59.895 66.667 35.69 6.15 40.69 3.07
1274 1344 4.189188 CCCACTCGCGGTAGTCGG 62.189 72.222 6.13 0.99 39.69 4.79
1327 1400 1.153647 CGTTGAGTAGGATGGCGCA 60.154 57.895 10.83 0.00 0.00 6.09
1449 1522 4.299547 AACAGCAGCTCGTCGCCA 62.300 61.111 0.00 0.00 40.39 5.69
1450 1523 3.782244 CAACAGCAGCTCGTCGCC 61.782 66.667 0.00 0.00 40.39 5.54
1451 1524 2.018582 GATCAACAGCAGCTCGTCGC 62.019 60.000 0.00 0.00 39.57 5.19
1462 1544 0.742281 CTCGTGGCCTGGATCAACAG 60.742 60.000 3.32 0.00 38.21 3.16
1465 1547 1.488705 AACCTCGTGGCCTGGATCAA 61.489 55.000 3.32 0.00 36.63 2.57
1480 1562 4.778143 GGACCCGCATGCGAACCT 62.778 66.667 39.90 18.93 42.83 3.50
1547 1629 1.723870 GCGATGATGAGGTTGCACC 59.276 57.895 0.00 0.00 38.99 5.01
1548 1630 1.349627 CGCGATGATGAGGTTGCAC 59.650 57.895 0.00 0.00 0.00 4.57
1555 1637 1.592669 GACCCCACGCGATGATGAG 60.593 63.158 15.93 0.00 0.00 2.90
1584 1666 4.115199 GGGTCAATGGAGGCGCCT 62.115 66.667 33.48 33.48 37.63 5.52
1591 1673 4.679500 TGGGACAGGGTCAATGGA 57.321 55.556 0.00 0.00 33.68 3.41
1602 1684 2.261361 CGATCGTGCACTGGGACA 59.739 61.111 16.19 0.00 34.61 4.02
1617 1699 2.283676 AGGAAGAAGGACGGCCGA 60.284 61.111 35.90 0.00 39.96 5.54
1656 1738 1.179174 TGCTGTGGTGCTCGTACTCT 61.179 55.000 0.00 0.00 0.00 3.24
1670 1752 0.035317 TGGCTTGAACTCGATGCTGT 59.965 50.000 0.00 0.00 0.00 4.40
1672 1754 2.555199 GTATGGCTTGAACTCGATGCT 58.445 47.619 0.00 0.00 0.00 3.79
1675 1757 2.794981 CGTCGTATGGCTTGAACTCGAT 60.795 50.000 0.00 0.00 0.00 3.59
1749 1855 3.535561 GATGTGGTCCATACTGAAGTGG 58.464 50.000 0.00 0.00 32.56 4.00
1758 1864 2.746904 CAGTTTTGCGATGTGGTCCATA 59.253 45.455 0.00 0.00 32.56 2.74
1759 1865 1.541147 CAGTTTTGCGATGTGGTCCAT 59.459 47.619 0.00 0.00 36.13 3.41
1766 1872 1.069906 GCGACTTCAGTTTTGCGATGT 60.070 47.619 0.00 0.00 0.00 3.06
1773 1879 0.814010 ACGCCTGCGACTTCAGTTTT 60.814 50.000 19.52 0.00 42.83 2.43
1776 1882 2.049063 GACGCCTGCGACTTCAGT 60.049 61.111 19.52 0.00 42.83 3.41
1878 1993 4.129737 ACGTCACGCCCATCGAGG 62.130 66.667 0.00 0.00 41.67 4.63
1895 2010 1.080093 GCGATGAACAGACCGGTGA 60.080 57.895 14.63 0.00 0.00 4.02
1902 2017 0.388520 CGTCCACTGCGATGAACAGA 60.389 55.000 0.00 0.00 38.55 3.41
1906 2021 2.264480 CCCGTCCACTGCGATGAA 59.736 61.111 0.00 0.00 0.00 2.57
2008 2123 3.414700 CAGCGGCCTGTTCACGAC 61.415 66.667 0.00 0.00 34.31 4.34
2032 2147 2.588314 GCTGATGAGCTCCGCCAG 60.588 66.667 12.15 15.61 42.52 4.85
2033 2148 4.519437 CGCTGATGAGCTCCGCCA 62.519 66.667 12.15 5.47 43.77 5.69
2067 2182 0.956633 ACTTGAAGTAGGCGTCGTCA 59.043 50.000 0.00 0.00 0.00 4.35
2166 2281 2.283388 ACCTCGACGTTGGGGCTA 60.283 61.111 22.48 0.00 0.00 3.93
2214 2329 3.473647 CCGCTGCCCAGATCCAGA 61.474 66.667 0.00 0.00 0.00 3.86
2265 2380 1.003573 GATGACCCCTCCCTCCACT 59.996 63.158 0.00 0.00 0.00 4.00
2274 2389 3.083997 GGCACGAGGATGACCCCT 61.084 66.667 0.00 0.00 39.77 4.79
2276 2391 1.153349 GAAGGCACGAGGATGACCC 60.153 63.158 0.00 0.00 36.73 4.46
2292 2407 1.694150 CTCCCATCGCCATAGAAGGAA 59.306 52.381 0.00 0.00 31.08 3.36
2300 2415 4.552365 CCACGCTCCCATCGCCAT 62.552 66.667 0.00 0.00 0.00 4.40
2319 2434 1.302993 GAAAAGGGGCACGTAGGCA 60.303 57.895 12.19 0.00 46.44 4.75
2334 2449 1.971167 GTCCATGTGGCGGCTGAAA 60.971 57.895 11.43 0.00 34.44 2.69
2344 2459 1.197721 GTTCTTGAAGGCGTCCATGTG 59.802 52.381 0.00 0.00 0.00 3.21
2383 2498 4.097892 CCGGGATAAAAATCAGAGTTTGGG 59.902 45.833 0.00 0.00 0.00 4.12
2385 2500 4.947388 TCCCGGGATAAAAATCAGAGTTTG 59.053 41.667 22.63 0.00 0.00 2.93
2401 2516 2.108168 CTGAGAGTTACAATCCCGGGA 58.892 52.381 29.18 29.18 0.00 5.14
2402 2517 1.831736 ACTGAGAGTTACAATCCCGGG 59.168 52.381 16.85 16.85 0.00 5.73
2405 2520 4.220821 TGACTGACTGAGAGTTACAATCCC 59.779 45.833 0.00 0.00 0.00 3.85
2406 2521 5.392767 TGACTGACTGAGAGTTACAATCC 57.607 43.478 0.00 0.00 0.00 3.01
2407 2522 6.183360 GCATTGACTGACTGAGAGTTACAATC 60.183 42.308 0.00 0.00 0.00 2.67
2408 2523 5.641209 GCATTGACTGACTGAGAGTTACAAT 59.359 40.000 0.00 0.00 0.00 2.71
2409 2524 4.991056 GCATTGACTGACTGAGAGTTACAA 59.009 41.667 0.00 0.00 0.00 2.41
2410 2525 4.560128 GCATTGACTGACTGAGAGTTACA 58.440 43.478 0.00 0.00 0.00 2.41
2411 2526 3.610242 CGCATTGACTGACTGAGAGTTAC 59.390 47.826 0.00 0.00 0.00 2.50
2412 2527 3.367395 CCGCATTGACTGACTGAGAGTTA 60.367 47.826 0.00 0.00 0.00 2.24
2413 2528 2.611473 CCGCATTGACTGACTGAGAGTT 60.611 50.000 0.00 0.00 0.00 3.01
2414 2529 1.067283 CCGCATTGACTGACTGAGAGT 60.067 52.381 0.00 0.00 0.00 3.24
2415 2530 1.067283 ACCGCATTGACTGACTGAGAG 60.067 52.381 0.00 0.00 0.00 3.20
2416 2531 0.969149 ACCGCATTGACTGACTGAGA 59.031 50.000 0.00 0.00 0.00 3.27
2417 2532 2.534298 CTACCGCATTGACTGACTGAG 58.466 52.381 0.00 0.00 0.00 3.35
2418 2533 1.404181 GCTACCGCATTGACTGACTGA 60.404 52.381 0.00 0.00 35.78 3.41
2419 2534 1.002366 GCTACCGCATTGACTGACTG 58.998 55.000 0.00 0.00 35.78 3.51
2420 2535 0.108138 GGCTACCGCATTGACTGACT 60.108 55.000 0.00 0.00 38.10 3.41
2421 2536 1.421410 CGGCTACCGCATTGACTGAC 61.421 60.000 0.00 0.00 41.17 3.51
2422 2537 1.153647 CGGCTACCGCATTGACTGA 60.154 57.895 0.00 0.00 41.17 3.41
2423 2538 3.398920 CGGCTACCGCATTGACTG 58.601 61.111 0.00 0.00 41.17 3.51
2433 2548 0.103208 CACCAGATCAGACGGCTACC 59.897 60.000 0.00 0.00 0.00 3.18
2434 2549 0.528684 GCACCAGATCAGACGGCTAC 60.529 60.000 0.00 0.00 0.00 3.58
2435 2550 1.816537 GCACCAGATCAGACGGCTA 59.183 57.895 0.00 0.00 0.00 3.93
2436 2551 2.581354 GCACCAGATCAGACGGCT 59.419 61.111 0.00 0.00 0.00 5.52
2437 2552 2.635229 ATCGCACCAGATCAGACGGC 62.635 60.000 0.00 0.00 0.00 5.68
2438 2553 0.668535 TATCGCACCAGATCAGACGG 59.331 55.000 0.00 0.00 32.39 4.79
2439 2554 2.030805 TCATATCGCACCAGATCAGACG 60.031 50.000 0.00 0.00 32.39 4.18
2440 2555 3.650070 TCATATCGCACCAGATCAGAC 57.350 47.619 0.00 0.00 32.39 3.51
2441 2556 4.616835 CGAATCATATCGCACCAGATCAGA 60.617 45.833 0.00 0.00 35.85 3.27
2442 2557 3.611549 CGAATCATATCGCACCAGATCAG 59.388 47.826 0.00 0.00 35.85 2.90
2443 2558 3.005791 ACGAATCATATCGCACCAGATCA 59.994 43.478 0.00 0.00 46.51 2.92
2444 2559 3.579709 ACGAATCATATCGCACCAGATC 58.420 45.455 0.00 0.00 46.51 2.75
2445 2560 3.667497 ACGAATCATATCGCACCAGAT 57.333 42.857 0.00 0.00 46.51 2.90
2446 2561 3.897325 GTACGAATCATATCGCACCAGA 58.103 45.455 0.00 0.00 46.51 3.86
2450 2565 4.486090 AGATGGTACGAATCATATCGCAC 58.514 43.478 9.19 0.00 46.51 5.34
2451 2566 4.783764 AGATGGTACGAATCATATCGCA 57.216 40.909 9.19 0.00 46.51 5.10
2452 2567 5.287274 CAGAAGATGGTACGAATCATATCGC 59.713 44.000 9.19 0.00 46.51 4.58
2453 2568 5.802451 CCAGAAGATGGTACGAATCATATCG 59.198 44.000 9.19 0.00 44.91 2.92
2468 2583 2.679837 AGCAATACAACGCCAGAAGATG 59.320 45.455 0.00 0.00 0.00 2.90
2469 2584 2.991250 AGCAATACAACGCCAGAAGAT 58.009 42.857 0.00 0.00 0.00 2.40
2470 2585 2.472695 AGCAATACAACGCCAGAAGA 57.527 45.000 0.00 0.00 0.00 2.87
2471 2586 3.236816 CAAAGCAATACAACGCCAGAAG 58.763 45.455 0.00 0.00 0.00 2.85
2472 2587 2.030363 CCAAAGCAATACAACGCCAGAA 60.030 45.455 0.00 0.00 0.00 3.02
2473 2588 1.539388 CCAAAGCAATACAACGCCAGA 59.461 47.619 0.00 0.00 0.00 3.86
2474 2589 1.269448 ACCAAAGCAATACAACGCCAG 59.731 47.619 0.00 0.00 0.00 4.85
2475 2590 1.000827 CACCAAAGCAATACAACGCCA 60.001 47.619 0.00 0.00 0.00 5.69
2476 2591 1.668628 CCACCAAAGCAATACAACGCC 60.669 52.381 0.00 0.00 0.00 5.68
2477 2592 1.000717 ACCACCAAAGCAATACAACGC 60.001 47.619 0.00 0.00 0.00 4.84
2478 2593 2.552315 AGACCACCAAAGCAATACAACG 59.448 45.455 0.00 0.00 0.00 4.10
2479 2594 4.278419 AGAAGACCACCAAAGCAATACAAC 59.722 41.667 0.00 0.00 0.00 3.32
2480 2595 4.278170 CAGAAGACCACCAAAGCAATACAA 59.722 41.667 0.00 0.00 0.00 2.41
2481 2596 3.820467 CAGAAGACCACCAAAGCAATACA 59.180 43.478 0.00 0.00 0.00 2.29
2482 2597 4.072131 TCAGAAGACCACCAAAGCAATAC 58.928 43.478 0.00 0.00 0.00 1.89
2483 2598 4.365514 TCAGAAGACCACCAAAGCAATA 57.634 40.909 0.00 0.00 0.00 1.90
2484 2599 3.228188 TCAGAAGACCACCAAAGCAAT 57.772 42.857 0.00 0.00 0.00 3.56
2485 2600 2.727123 TCAGAAGACCACCAAAGCAA 57.273 45.000 0.00 0.00 0.00 3.91
2486 2601 2.727123 TTCAGAAGACCACCAAAGCA 57.273 45.000 0.00 0.00 0.00 3.91
2487 2602 2.229784 CCATTCAGAAGACCACCAAAGC 59.770 50.000 0.00 0.00 0.00 3.51
2488 2603 2.229784 GCCATTCAGAAGACCACCAAAG 59.770 50.000 0.00 0.00 0.00 2.77
2489 2604 2.238521 GCCATTCAGAAGACCACCAAA 58.761 47.619 0.00 0.00 0.00 3.28
2490 2605 1.547675 GGCCATTCAGAAGACCACCAA 60.548 52.381 0.00 0.00 0.00 3.67
2491 2606 0.038166 GGCCATTCAGAAGACCACCA 59.962 55.000 0.00 0.00 0.00 4.17
2492 2607 0.329596 AGGCCATTCAGAAGACCACC 59.670 55.000 5.01 0.00 0.00 4.61
2493 2608 2.087646 GAAGGCCATTCAGAAGACCAC 58.912 52.381 5.01 0.00 37.88 4.16
2494 2609 1.988107 AGAAGGCCATTCAGAAGACCA 59.012 47.619 5.01 0.00 40.67 4.02
2495 2610 2.797177 AGAAGGCCATTCAGAAGACC 57.203 50.000 5.01 0.00 40.67 3.85
2496 2611 5.649831 ACAAATAGAAGGCCATTCAGAAGAC 59.350 40.000 5.01 0.00 40.67 3.01
2497 2612 5.649395 CACAAATAGAAGGCCATTCAGAAGA 59.351 40.000 5.01 0.00 40.67 2.87
2498 2613 5.678107 GCACAAATAGAAGGCCATTCAGAAG 60.678 44.000 5.01 0.15 40.67 2.85
2499 2614 4.158394 GCACAAATAGAAGGCCATTCAGAA 59.842 41.667 5.01 0.00 40.67 3.02
2500 2615 3.696051 GCACAAATAGAAGGCCATTCAGA 59.304 43.478 5.01 0.00 40.67 3.27
2501 2616 3.181483 GGCACAAATAGAAGGCCATTCAG 60.181 47.826 5.01 0.00 44.01 3.02
2502 2617 2.760092 GGCACAAATAGAAGGCCATTCA 59.240 45.455 5.01 0.00 44.01 2.57
2503 2618 3.026694 AGGCACAAATAGAAGGCCATTC 58.973 45.455 5.01 6.15 46.96 2.67
2504 2619 3.105959 AGGCACAAATAGAAGGCCATT 57.894 42.857 5.01 0.00 46.96 3.16
2505 2620 2.834638 AGGCACAAATAGAAGGCCAT 57.165 45.000 5.01 0.00 46.96 4.40
2506 2621 2.562298 CAAAGGCACAAATAGAAGGCCA 59.438 45.455 5.01 0.00 46.96 5.36
2507 2622 2.562738 ACAAAGGCACAAATAGAAGGCC 59.437 45.455 0.00 0.00 44.92 5.19
2508 2623 3.942130 ACAAAGGCACAAATAGAAGGC 57.058 42.857 0.00 0.00 0.00 4.35
2509 2624 5.105797 TGCATACAAAGGCACAAATAGAAGG 60.106 40.000 0.00 0.00 37.52 3.46
2510 2625 5.953183 TGCATACAAAGGCACAAATAGAAG 58.047 37.500 0.00 0.00 37.52 2.85
2511 2626 5.973899 TGCATACAAAGGCACAAATAGAA 57.026 34.783 0.00 0.00 37.52 2.10
2520 2635 2.161855 CTCCTTGTGCATACAAAGGCA 58.838 47.619 12.93 0.00 45.53 4.75
2521 2636 2.436417 TCTCCTTGTGCATACAAAGGC 58.564 47.619 12.93 0.00 45.53 4.35
2522 2637 3.181493 GCATCTCCTTGTGCATACAAAGG 60.181 47.826 11.98 11.98 45.53 3.11
2523 2638 3.441222 TGCATCTCCTTGTGCATACAAAG 59.559 43.478 0.00 0.00 45.60 2.77
2524 2639 3.419943 TGCATCTCCTTGTGCATACAAA 58.580 40.909 0.00 0.00 45.60 2.83
2525 2640 3.070476 TGCATCTCCTTGTGCATACAA 57.930 42.857 0.00 0.00 45.60 2.41
2526 2641 2.785540 TGCATCTCCTTGTGCATACA 57.214 45.000 0.00 0.00 45.60 2.29
2531 2646 2.273370 CACAATGCATCTCCTTGTGC 57.727 50.000 15.09 0.00 42.09 4.57
2544 2659 2.473530 AAACACTCACGCACACAATG 57.526 45.000 0.00 0.00 0.00 2.82
2545 2660 2.421775 TCAAAACACTCACGCACACAAT 59.578 40.909 0.00 0.00 0.00 2.71
2546 2661 1.807142 TCAAAACACTCACGCACACAA 59.193 42.857 0.00 0.00 0.00 3.33
2547 2662 1.443802 TCAAAACACTCACGCACACA 58.556 45.000 0.00 0.00 0.00 3.72
2548 2663 2.535934 TTCAAAACACTCACGCACAC 57.464 45.000 0.00 0.00 0.00 3.82
2549 2664 3.773860 ATTTCAAAACACTCACGCACA 57.226 38.095 0.00 0.00 0.00 4.57
2550 2665 4.326009 ACAAATTTCAAAACACTCACGCAC 59.674 37.500 0.00 0.00 0.00 5.34
2551 2666 4.489810 ACAAATTTCAAAACACTCACGCA 58.510 34.783 0.00 0.00 0.00 5.24
2552 2667 6.747659 ATACAAATTTCAAAACACTCACGC 57.252 33.333 0.00 0.00 0.00 5.34
2579 2694 2.531206 CGACTGACCTGTAGCTAAAGC 58.469 52.381 5.29 0.00 42.49 3.51
2580 2695 2.531206 GCGACTGACCTGTAGCTAAAG 58.469 52.381 3.68 3.68 36.03 1.85
2581 2696 1.203994 GGCGACTGACCTGTAGCTAAA 59.796 52.381 0.00 0.00 38.36 1.85
2582 2697 0.815734 GGCGACTGACCTGTAGCTAA 59.184 55.000 0.00 0.00 38.36 3.09
2583 2698 0.034380 AGGCGACTGACCTGTAGCTA 60.034 55.000 0.00 0.00 41.13 3.32
2584 2699 1.304547 AGGCGACTGACCTGTAGCT 60.305 57.895 0.00 0.00 41.13 3.32
2585 2700 3.289525 AGGCGACTGACCTGTAGC 58.710 61.111 0.00 4.16 41.13 3.58
2595 2710 5.414765 CCCTAACTTAATTTTTCAGGCGACT 59.585 40.000 0.00 0.00 46.44 4.18
2596 2711 5.182570 ACCCTAACTTAATTTTTCAGGCGAC 59.817 40.000 0.00 0.00 0.00 5.19
2597 2712 5.318630 ACCCTAACTTAATTTTTCAGGCGA 58.681 37.500 0.00 0.00 0.00 5.54
2598 2713 5.182380 TGACCCTAACTTAATTTTTCAGGCG 59.818 40.000 0.00 0.00 0.00 5.52
2599 2714 6.208797 AGTGACCCTAACTTAATTTTTCAGGC 59.791 38.462 0.00 0.00 0.00 4.85
2600 2715 7.761038 AGTGACCCTAACTTAATTTTTCAGG 57.239 36.000 0.00 0.00 0.00 3.86
2608 2723 9.682465 GGAAAAAGATAGTGACCCTAACTTAAT 57.318 33.333 0.00 0.00 37.68 1.40
2609 2724 8.662255 TGGAAAAAGATAGTGACCCTAACTTAA 58.338 33.333 0.00 0.00 37.68 1.85
2610 2725 8.098912 GTGGAAAAAGATAGTGACCCTAACTTA 58.901 37.037 0.00 0.00 37.68 2.24
2611 2726 6.940867 GTGGAAAAAGATAGTGACCCTAACTT 59.059 38.462 0.00 0.00 39.64 2.66
2612 2727 6.272558 AGTGGAAAAAGATAGTGACCCTAACT 59.727 38.462 0.00 0.00 30.59 2.24
2613 2728 6.371825 CAGTGGAAAAAGATAGTGACCCTAAC 59.628 42.308 0.00 0.00 0.00 2.34
2614 2729 6.043938 ACAGTGGAAAAAGATAGTGACCCTAA 59.956 38.462 0.00 0.00 0.00 2.69
2615 2730 5.546499 ACAGTGGAAAAAGATAGTGACCCTA 59.454 40.000 0.00 0.00 0.00 3.53
2616 2731 4.351111 ACAGTGGAAAAAGATAGTGACCCT 59.649 41.667 0.00 0.00 0.00 4.34
2617 2732 4.652822 ACAGTGGAAAAAGATAGTGACCC 58.347 43.478 0.00 0.00 0.00 4.46
2618 2733 5.531287 ACAACAGTGGAAAAAGATAGTGACC 59.469 40.000 0.00 0.00 0.00 4.02
2619 2734 6.483640 AGACAACAGTGGAAAAAGATAGTGAC 59.516 38.462 0.00 0.00 0.00 3.67
2620 2735 6.591935 AGACAACAGTGGAAAAAGATAGTGA 58.408 36.000 0.00 0.00 0.00 3.41
2621 2736 6.867662 AGACAACAGTGGAAAAAGATAGTG 57.132 37.500 0.00 0.00 0.00 2.74
2622 2737 6.238759 GCAAGACAACAGTGGAAAAAGATAGT 60.239 38.462 0.00 0.00 0.00 2.12
2623 2738 6.145535 GCAAGACAACAGTGGAAAAAGATAG 58.854 40.000 0.00 0.00 0.00 2.08
2624 2739 5.009610 GGCAAGACAACAGTGGAAAAAGATA 59.990 40.000 0.00 0.00 0.00 1.98
2625 2740 4.202151 GGCAAGACAACAGTGGAAAAAGAT 60.202 41.667 0.00 0.00 0.00 2.40
2626 2741 3.130340 GGCAAGACAACAGTGGAAAAAGA 59.870 43.478 0.00 0.00 0.00 2.52
2627 2742 3.119173 TGGCAAGACAACAGTGGAAAAAG 60.119 43.478 0.00 0.00 0.00 2.27
2628 2743 2.828520 TGGCAAGACAACAGTGGAAAAA 59.171 40.909 0.00 0.00 0.00 1.94
2629 2744 2.451490 TGGCAAGACAACAGTGGAAAA 58.549 42.857 0.00 0.00 0.00 2.29
2630 2745 2.136298 TGGCAAGACAACAGTGGAAA 57.864 45.000 0.00 0.00 0.00 3.13
2631 2746 2.136298 TTGGCAAGACAACAGTGGAA 57.864 45.000 0.00 0.00 0.00 3.53
2632 2747 2.363306 ATTGGCAAGACAACAGTGGA 57.637 45.000 5.96 0.00 32.39 4.02
2633 2748 3.149196 AGTATTGGCAAGACAACAGTGG 58.851 45.455 25.09 0.00 32.39 4.00
2634 2749 4.320494 GGAAGTATTGGCAAGACAACAGTG 60.320 45.833 25.09 0.00 32.39 3.66
2635 2750 3.821033 GGAAGTATTGGCAAGACAACAGT 59.179 43.478 25.09 2.90 32.39 3.55
2636 2751 3.820467 TGGAAGTATTGGCAAGACAACAG 59.180 43.478 25.09 0.00 32.39 3.16
2637 2752 3.820467 CTGGAAGTATTGGCAAGACAACA 59.180 43.478 25.09 18.29 32.39 3.33
2638 2753 4.425577 CTGGAAGTATTGGCAAGACAAC 57.574 45.455 25.09 17.40 32.39 3.32
2724 2841 7.279981 GGGGCTATGTAAAATTTTCCATTTGAC 59.720 37.037 13.40 9.47 0.00 3.18
2781 2898 6.100668 GCTAAGAACTCTTTACATCTTCCGT 58.899 40.000 0.00 0.00 37.40 4.69
2810 2927 9.399797 AGAAGACAATGTTGATGCTCATAATAA 57.600 29.630 0.00 0.00 0.00 1.40
2811 2928 8.969260 AGAAGACAATGTTGATGCTCATAATA 57.031 30.769 0.00 0.00 0.00 0.98
2812 2929 7.774157 AGAGAAGACAATGTTGATGCTCATAAT 59.226 33.333 0.00 0.00 30.50 1.28
2868 3012 1.882912 TGCGAGTTTGAGTGCTGAAT 58.117 45.000 0.00 0.00 0.00 2.57
2916 3060 2.371510 GCTATGGAGAAAGGGAGCAGAT 59.628 50.000 0.00 0.00 0.00 2.90
2953 3097 1.337071 GCAGATGTGGCATCAGATTGG 59.663 52.381 11.12 0.00 0.00 3.16
3031 3188 1.200760 TAGACCCACCATGTGCTGCT 61.201 55.000 0.00 0.00 31.34 4.24
3032 3189 0.107017 ATAGACCCACCATGTGCTGC 60.107 55.000 0.00 0.00 31.34 5.25
3033 3190 1.210234 TGATAGACCCACCATGTGCTG 59.790 52.381 0.00 0.00 31.34 4.41
3034 3191 1.210478 GTGATAGACCCACCATGTGCT 59.790 52.381 0.00 0.00 31.34 4.40
3042 3199 3.627395 TCAATGGTGTGATAGACCCAC 57.373 47.619 0.00 0.00 31.84 4.61
3101 4674 2.207590 TGCAGCAGCGATATTCAGAAG 58.792 47.619 0.00 0.00 46.23 2.85
3130 4703 9.321562 GATGGTGCAATTTCATTTCAGAATAAT 57.678 29.630 0.00 0.00 0.00 1.28
3142 4715 6.289834 AGAAAATGTTGATGGTGCAATTTCA 58.710 32.000 0.00 0.00 31.55 2.69
3192 4765 2.994995 TGATGCCGTCGAGGTGGT 60.995 61.111 4.18 0.00 43.70 4.16
3239 4812 1.308128 AGATGGGGGACATGGAGCA 60.308 57.895 0.00 0.00 40.72 4.26
3327 4900 4.215109 GGCAATATGGAAGGCTAAAAGGA 58.785 43.478 0.00 0.00 0.00 3.36
3380 4953 5.352569 CACTGGAAGAGTCGCTTAATGAAAT 59.647 40.000 0.00 0.00 36.83 2.17
3387 4960 0.966179 TGCACTGGAAGAGTCGCTTA 59.034 50.000 0.00 0.00 36.83 3.09
3459 5034 5.762179 TTGGATACTTGTGGATGAAGAGT 57.238 39.130 0.00 0.00 37.61 3.24
3488 5063 2.953648 TGCTTGAATGTAGGATGGCATG 59.046 45.455 3.81 0.00 0.00 4.06
3489 5064 3.220110 CTGCTTGAATGTAGGATGGCAT 58.780 45.455 0.00 0.00 0.00 4.40
3531 5106 6.940739 ACTTGTGCTATCTGTGAAGTTAGAT 58.059 36.000 0.00 0.00 37.42 1.98


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.