Multiple sequence alignment - TraesCS7B01G409800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G409800 chr7B 100.000 3428 0 0 1 3428 678849894 678853321 0.000000e+00 6331.0
1 TraesCS7B01G409800 chr7B 94.261 1725 94 4 764 2485 678736888 678735166 0.000000e+00 2632.0
2 TraesCS7B01G409800 chr7B 79.155 1468 247 39 1056 2481 678664031 678662581 0.000000e+00 961.0
3 TraesCS7B01G409800 chr7B 96.705 516 15 1 2491 3006 520117220 520116707 0.000000e+00 857.0
4 TraesCS7B01G409800 chr7B 97.669 429 9 1 3001 3428 520114052 520113624 0.000000e+00 736.0
5 TraesCS7B01G409800 chr7B 78.675 755 114 36 763 1496 678648310 678647582 3.120000e-125 459.0
6 TraesCS7B01G409800 chr7B 96.057 279 11 0 488 766 463843352 463843630 4.030000e-124 455.0
7 TraesCS7B01G409800 chr7B 94.000 150 9 0 14 163 678737086 678736937 9.570000e-56 228.0
8 TraesCS7B01G409800 chr7B 88.202 178 17 2 767 944 678737037 678736864 3.470000e-50 209.0
9 TraesCS7B01G409800 chr7B 85.946 185 22 3 767 950 678736961 678736780 9.710000e-46 195.0
10 TraesCS7B01G409800 chr7B 85.455 55 8 0 109 163 678849926 678849980 1.330000e-04 58.4
11 TraesCS7B01G409800 chr7B 85.455 55 8 0 33 87 678850002 678850056 1.330000e-04 58.4
12 TraesCS7B01G409800 chr7D 92.353 1713 122 6 764 2472 599399244 599397537 0.000000e+00 2429.0
13 TraesCS7B01G409800 chr7D 79.082 1678 280 49 763 2398 599193725 599192077 0.000000e+00 1088.0
14 TraesCS7B01G409800 chr7D 96.014 276 10 1 490 764 353940606 353940331 6.750000e-122 448.0
15 TraesCS7B01G409800 chr7D 95.341 279 13 0 488 766 500626120 500625842 8.730000e-121 444.0
16 TraesCS7B01G409800 chr7D 80.508 472 80 10 1056 1521 599269167 599268702 5.440000e-93 351.0
17 TraesCS7B01G409800 chr7D 93.333 150 10 0 14 163 599399442 599399293 4.450000e-54 222.0
18 TraesCS7B01G409800 chr7D 88.202 178 17 2 767 944 599399393 599399220 3.470000e-50 209.0
19 TraesCS7B01G409800 chr7D 86.517 178 21 2 767 944 599399317 599399143 3.490000e-45 193.0
20 TraesCS7B01G409800 chr7A 94.072 1552 59 9 967 2490 691675677 691677223 0.000000e+00 2326.0
21 TraesCS7B01G409800 chr7A 91.124 1611 140 2 864 2472 691522789 691521180 0.000000e+00 2180.0
22 TraesCS7B01G409800 chr7A 97.158 950 16 1 2490 3428 169308110 169309059 0.000000e+00 1594.0
23 TraesCS7B01G409800 chr7A 97.133 279 8 0 160 438 610710437 610710715 4.000000e-129 472.0
24 TraesCS7B01G409800 chr7A 96.466 283 9 1 160 442 567573526 567573807 1.860000e-127 466.0
25 TraesCS7B01G409800 chr7A 79.551 445 80 6 2023 2456 691472873 691472429 1.190000e-79 307.0
26 TraesCS7B01G409800 chr7A 93.750 160 7 2 1 157 691674794 691674953 1.590000e-58 237.0
27 TraesCS7B01G409800 chr7A 95.200 125 6 0 845 969 691675284 691675408 7.500000e-47 198.0
28 TraesCS7B01G409800 chr7A 87.429 175 17 3 770 944 691523046 691522877 2.700000e-46 196.0
29 TraesCS7B01G409800 chr7A 88.148 135 13 2 767 901 691522973 691522842 1.270000e-34 158.0
30 TraesCS7B01G409800 chr7A 81.871 171 28 2 696 866 691675216 691675383 1.280000e-29 141.0
31 TraesCS7B01G409800 chr7A 85.938 64 6 3 103 163 691674820 691674883 7.940000e-07 65.8
32 TraesCS7B01G409800 chr5B 98.832 942 11 0 2487 3428 672842164 672843105 0.000000e+00 1679.0
33 TraesCS7B01G409800 chr5B 97.766 940 19 2 2490 3428 341549783 341550721 0.000000e+00 1618.0
34 TraesCS7B01G409800 chr5B 98.320 774 13 0 2508 3281 42147545 42148318 0.000000e+00 1358.0
35 TraesCS7B01G409800 chr5B 96.786 280 9 0 488 767 544337302 544337023 5.180000e-128 468.0
36 TraesCS7B01G409800 chr3B 98.722 939 12 0 2490 3428 491524243 491523305 0.000000e+00 1668.0
37 TraesCS7B01G409800 chr3B 96.000 275 11 0 490 764 99093610 99093884 6.750000e-122 448.0
38 TraesCS7B01G409800 chr1B 97.985 943 18 1 2486 3428 7968757 7969698 0.000000e+00 1635.0
39 TraesCS7B01G409800 chr1B 89.114 937 88 6 2490 3425 667812404 667813327 0.000000e+00 1153.0
40 TraesCS7B01G409800 chr1B 97.297 370 9 1 2490 2859 634193494 634193862 8.080000e-176 627.0
41 TraesCS7B01G409800 chr1B 77.064 545 113 10 2499 3037 645339688 645339150 1.550000e-78 303.0
42 TraesCS7B01G409800 chr6B 97.875 941 17 3 2490 3428 42758970 42759909 0.000000e+00 1624.0
43 TraesCS7B01G409800 chr6B 97.470 593 14 1 2490 3081 561044807 561044215 0.000000e+00 1011.0
44 TraesCS7B01G409800 chr6B 93.596 406 14 2 2511 2904 599411012 599411417 2.280000e-166 595.0
45 TraesCS7B01G409800 chr1D 91.649 934 67 4 2499 3428 479584170 479585096 0.000000e+00 1282.0
46 TraesCS7B01G409800 chr1D 77.959 921 193 9 2483 3398 462862048 462861133 4.960000e-158 568.0
47 TraesCS7B01G409800 chr1D 92.617 149 9 1 2490 2638 233921178 233921032 2.680000e-51 213.0
48 TraesCS7B01G409800 chr2B 98.305 531 9 0 2490 3020 560344673 560345203 0.000000e+00 931.0
49 TraesCS7B01G409800 chr2B 95.070 284 14 0 483 766 647735536 647735819 6.750000e-122 448.0
50 TraesCS7B01G409800 chr3D 89.060 521 52 4 2513 3032 177375671 177375155 2.880000e-180 641.0
51 TraesCS7B01G409800 chr3D 88.889 333 34 3 3098 3428 177375159 177374828 1.150000e-109 407.0
52 TraesCS7B01G409800 chr4D 76.721 915 205 7 2488 3398 51903922 51904832 1.420000e-138 503.0
53 TraesCS7B01G409800 chr4D 95.517 290 11 2 164 452 440037189 440036901 2.410000e-126 462.0
54 TraesCS7B01G409800 chr6A 96.864 287 6 3 155 441 371732675 371732392 8.610000e-131 477.0
55 TraesCS7B01G409800 chr6A 97.153 281 8 0 158 438 38757812 38758092 3.100000e-130 475.0
56 TraesCS7B01G409800 chr3A 97.133 279 8 0 160 438 57206274 57206552 4.000000e-129 472.0
57 TraesCS7B01G409800 chr3A 97.455 275 6 1 164 437 52445372 52445098 5.180000e-128 468.0
58 TraesCS7B01G409800 chr5D 95.548 292 10 3 154 445 482565388 482565676 6.700000e-127 464.0
59 TraesCS7B01G409800 chr5D 96.085 281 11 0 490 770 518287009 518286729 3.120000e-125 459.0
60 TraesCS7B01G409800 chr5D 94.444 216 11 1 2492 2707 188388787 188388573 7.090000e-87 331.0
61 TraesCS7B01G409800 chr2A 95.833 288 11 1 160 446 523881118 523880831 6.700000e-127 464.0
62 TraesCS7B01G409800 chr6D 96.727 275 9 0 490 764 9452377 9452651 3.120000e-125 459.0
63 TraesCS7B01G409800 chr6D 95.730 281 12 0 486 766 407826103 407825823 1.450000e-123 453.0
64 TraesCS7B01G409800 chr4B 76.858 592 117 11 1132 1707 12840339 12840926 1.990000e-82 316.0
65 TraesCS7B01G409800 chr4B 96.000 50 1 1 2484 2532 623320603 623320554 2.840000e-11 80.5
66 TraesCS7B01G409800 chr4A 74.745 392 81 12 1083 1465 623690054 623689672 3.540000e-35 159.0
67 TraesCS7B01G409800 chr4A 71.126 755 164 38 1136 1860 623741858 623741128 1.660000e-28 137.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G409800 chr7B 678849894 678853321 3427 False 2149.266667 6331 90.303333 1 3428 3 chr7B.!!$F2 3427
1 TraesCS7B01G409800 chr7B 678662581 678664031 1450 True 961.000000 961 79.155000 1056 2481 1 chr7B.!!$R2 1425
2 TraesCS7B01G409800 chr7B 678735166 678737086 1920 True 816.000000 2632 90.602250 14 2485 4 chr7B.!!$R4 2471
3 TraesCS7B01G409800 chr7B 520113624 520117220 3596 True 796.500000 857 97.187000 2491 3428 2 chr7B.!!$R3 937
4 TraesCS7B01G409800 chr7B 678647582 678648310 728 True 459.000000 459 78.675000 763 1496 1 chr7B.!!$R1 733
5 TraesCS7B01G409800 chr7D 599192077 599193725 1648 True 1088.000000 1088 79.082000 763 2398 1 chr7D.!!$R3 1635
6 TraesCS7B01G409800 chr7D 599397537 599399442 1905 True 763.250000 2429 90.101250 14 2472 4 chr7D.!!$R5 2458
7 TraesCS7B01G409800 chr7A 169308110 169309059 949 False 1594.000000 1594 97.158000 2490 3428 1 chr7A.!!$F1 938
8 TraesCS7B01G409800 chr7A 691521180 691523046 1866 True 844.666667 2180 88.900333 767 2472 3 chr7A.!!$R2 1705
9 TraesCS7B01G409800 chr7A 691674794 691677223 2429 False 593.560000 2326 90.166200 1 2490 5 chr7A.!!$F4 2489
10 TraesCS7B01G409800 chr5B 672842164 672843105 941 False 1679.000000 1679 98.832000 2487 3428 1 chr5B.!!$F3 941
11 TraesCS7B01G409800 chr5B 341549783 341550721 938 False 1618.000000 1618 97.766000 2490 3428 1 chr5B.!!$F2 938
12 TraesCS7B01G409800 chr5B 42147545 42148318 773 False 1358.000000 1358 98.320000 2508 3281 1 chr5B.!!$F1 773
13 TraesCS7B01G409800 chr3B 491523305 491524243 938 True 1668.000000 1668 98.722000 2490 3428 1 chr3B.!!$R1 938
14 TraesCS7B01G409800 chr1B 7968757 7969698 941 False 1635.000000 1635 97.985000 2486 3428 1 chr1B.!!$F1 942
15 TraesCS7B01G409800 chr1B 667812404 667813327 923 False 1153.000000 1153 89.114000 2490 3425 1 chr1B.!!$F3 935
16 TraesCS7B01G409800 chr1B 645339150 645339688 538 True 303.000000 303 77.064000 2499 3037 1 chr1B.!!$R1 538
17 TraesCS7B01G409800 chr6B 42758970 42759909 939 False 1624.000000 1624 97.875000 2490 3428 1 chr6B.!!$F1 938
18 TraesCS7B01G409800 chr6B 561044215 561044807 592 True 1011.000000 1011 97.470000 2490 3081 1 chr6B.!!$R1 591
19 TraesCS7B01G409800 chr1D 479584170 479585096 926 False 1282.000000 1282 91.649000 2499 3428 1 chr1D.!!$F1 929
20 TraesCS7B01G409800 chr1D 462861133 462862048 915 True 568.000000 568 77.959000 2483 3398 1 chr1D.!!$R2 915
21 TraesCS7B01G409800 chr2B 560344673 560345203 530 False 931.000000 931 98.305000 2490 3020 1 chr2B.!!$F1 530
22 TraesCS7B01G409800 chr3D 177374828 177375671 843 True 524.000000 641 88.974500 2513 3428 2 chr3D.!!$R1 915
23 TraesCS7B01G409800 chr4D 51903922 51904832 910 False 503.000000 503 76.721000 2488 3398 1 chr4D.!!$F1 910
24 TraesCS7B01G409800 chr4B 12840339 12840926 587 False 316.000000 316 76.858000 1132 1707 1 chr4B.!!$F1 575

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
163 167 0.108138 CAGCCAAACCCTCCTCTACG 60.108 60.0 0.0 0.0 0.0 3.51 F
323 327 0.108992 GAGTGTGCGATGTTCCGGTA 60.109 55.0 0.0 0.0 0.0 4.02 F
1422 1967 0.033228 CCAACGCCCATTTCAGCAAA 59.967 50.0 0.0 0.0 0.0 3.68 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1054 1593 1.748403 GCGGTGAGCTCCATGGATA 59.252 57.895 16.63 0.0 44.04 2.59 R
2245 2817 0.469494 CCCGATGATGGTGATGTCCA 59.531 55.000 0.00 0.0 42.01 4.02 R
2711 3318 4.041691 GGAGCCCCTATACTGCTATTTTGA 59.958 45.833 0.00 0.0 34.99 2.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
132 136 1.544246 CCCAACCGAGGATTTTTGGTC 59.456 52.381 0.00 0.00 37.41 4.02
163 167 0.108138 CAGCCAAACCCTCCTCTACG 60.108 60.000 0.00 0.00 0.00 3.51
164 168 1.221021 GCCAAACCCTCCTCTACGG 59.779 63.158 0.00 0.00 0.00 4.02
165 169 1.221021 CCAAACCCTCCTCTACGGC 59.779 63.158 0.00 0.00 0.00 5.68
166 170 1.265454 CCAAACCCTCCTCTACGGCT 61.265 60.000 0.00 0.00 0.00 5.52
167 171 0.108138 CAAACCCTCCTCTACGGCTG 60.108 60.000 0.00 0.00 0.00 4.85
169 173 2.042843 CCCTCCTCTACGGCTGGT 60.043 66.667 0.00 0.00 0.00 4.00
170 174 1.686110 CCCTCCTCTACGGCTGGTT 60.686 63.158 0.00 0.00 0.00 3.67
171 175 0.396695 CCCTCCTCTACGGCTGGTTA 60.397 60.000 0.00 0.00 0.00 2.85
172 176 0.745468 CCTCCTCTACGGCTGGTTAC 59.255 60.000 0.00 0.00 0.00 2.50
173 177 1.471119 CTCCTCTACGGCTGGTTACA 58.529 55.000 0.00 0.00 0.00 2.41
174 178 1.822990 CTCCTCTACGGCTGGTTACAA 59.177 52.381 0.00 0.00 0.00 2.41
175 179 2.431057 CTCCTCTACGGCTGGTTACAAT 59.569 50.000 0.00 0.00 0.00 2.71
176 180 2.167693 TCCTCTACGGCTGGTTACAATG 59.832 50.000 0.00 0.00 0.00 2.82
177 181 2.550978 CTCTACGGCTGGTTACAATGG 58.449 52.381 0.00 0.00 0.00 3.16
178 182 1.208535 TCTACGGCTGGTTACAATGGG 59.791 52.381 0.00 0.00 0.00 4.00
179 183 0.393267 TACGGCTGGTTACAATGGGC 60.393 55.000 0.00 0.00 0.00 5.36
180 184 1.677300 CGGCTGGTTACAATGGGCA 60.677 57.895 0.00 0.00 0.00 5.36
181 185 1.247419 CGGCTGGTTACAATGGGCAA 61.247 55.000 0.00 0.00 0.00 4.52
182 186 0.532115 GGCTGGTTACAATGGGCAAG 59.468 55.000 0.00 0.00 0.00 4.01
183 187 1.544724 GCTGGTTACAATGGGCAAGA 58.455 50.000 0.00 0.00 0.00 3.02
184 188 1.892474 GCTGGTTACAATGGGCAAGAA 59.108 47.619 0.00 0.00 0.00 2.52
185 189 2.352715 GCTGGTTACAATGGGCAAGAAC 60.353 50.000 0.00 0.00 0.00 3.01
186 190 2.890311 CTGGTTACAATGGGCAAGAACA 59.110 45.455 0.00 0.00 0.00 3.18
187 191 3.505386 TGGTTACAATGGGCAAGAACAT 58.495 40.909 0.00 0.00 0.00 2.71
188 192 4.667573 TGGTTACAATGGGCAAGAACATA 58.332 39.130 0.00 0.00 0.00 2.29
189 193 5.080337 TGGTTACAATGGGCAAGAACATAA 58.920 37.500 0.00 0.00 0.00 1.90
190 194 5.184864 TGGTTACAATGGGCAAGAACATAAG 59.815 40.000 0.00 0.00 0.00 1.73
191 195 3.874392 ACAATGGGCAAGAACATAAGC 57.126 42.857 0.00 0.00 0.00 3.09
192 196 3.434309 ACAATGGGCAAGAACATAAGCT 58.566 40.909 0.00 0.00 0.00 3.74
193 197 4.599041 ACAATGGGCAAGAACATAAGCTA 58.401 39.130 0.00 0.00 0.00 3.32
194 198 4.641989 ACAATGGGCAAGAACATAAGCTAG 59.358 41.667 0.00 0.00 0.00 3.42
195 199 4.510167 ATGGGCAAGAACATAAGCTAGT 57.490 40.909 0.00 0.00 0.00 2.57
196 200 5.630415 ATGGGCAAGAACATAAGCTAGTA 57.370 39.130 0.00 0.00 0.00 1.82
197 201 5.429681 TGGGCAAGAACATAAGCTAGTAA 57.570 39.130 0.00 0.00 0.00 2.24
198 202 5.183228 TGGGCAAGAACATAAGCTAGTAAC 58.817 41.667 0.00 0.00 0.00 2.50
199 203 5.045869 TGGGCAAGAACATAAGCTAGTAACT 60.046 40.000 0.00 0.00 0.00 2.24
200 204 5.880887 GGGCAAGAACATAAGCTAGTAACTT 59.119 40.000 0.00 0.00 0.00 2.66
201 205 7.046033 GGGCAAGAACATAAGCTAGTAACTTA 58.954 38.462 0.00 0.00 34.29 2.24
202 206 7.011202 GGGCAAGAACATAAGCTAGTAACTTAC 59.989 40.741 0.00 0.00 32.67 2.34
203 207 7.548075 GGCAAGAACATAAGCTAGTAACTTACA 59.452 37.037 1.79 0.00 32.67 2.41
204 208 8.381387 GCAAGAACATAAGCTAGTAACTTACAC 58.619 37.037 1.79 0.00 32.67 2.90
205 209 9.419297 CAAGAACATAAGCTAGTAACTTACACA 57.581 33.333 1.79 0.00 32.67 3.72
206 210 9.991906 AAGAACATAAGCTAGTAACTTACACAA 57.008 29.630 1.79 0.00 32.67 3.33
210 214 9.379791 ACATAAGCTAGTAACTTACACAATTCC 57.620 33.333 1.79 0.00 32.67 3.01
211 215 8.827677 CATAAGCTAGTAACTTACACAATTCCC 58.172 37.037 1.79 0.00 32.67 3.97
212 216 6.622427 AGCTAGTAACTTACACAATTCCCT 57.378 37.500 1.79 0.00 0.00 4.20
213 217 7.729124 AGCTAGTAACTTACACAATTCCCTA 57.271 36.000 1.79 0.00 0.00 3.53
214 218 7.783042 AGCTAGTAACTTACACAATTCCCTAG 58.217 38.462 1.79 0.00 0.00 3.02
215 219 7.618512 AGCTAGTAACTTACACAATTCCCTAGA 59.381 37.037 1.79 0.00 0.00 2.43
216 220 7.705752 GCTAGTAACTTACACAATTCCCTAGAC 59.294 40.741 1.79 0.00 0.00 2.59
217 221 7.793948 AGTAACTTACACAATTCCCTAGACT 57.206 36.000 1.79 0.00 0.00 3.24
218 222 8.890410 AGTAACTTACACAATTCCCTAGACTA 57.110 34.615 1.79 0.00 0.00 2.59
219 223 9.490083 AGTAACTTACACAATTCCCTAGACTAT 57.510 33.333 1.79 0.00 0.00 2.12
220 224 9.530633 GTAACTTACACAATTCCCTAGACTATG 57.469 37.037 0.00 0.00 0.00 2.23
221 225 7.735326 ACTTACACAATTCCCTAGACTATGT 57.265 36.000 0.00 0.00 0.00 2.29
222 226 8.147244 ACTTACACAATTCCCTAGACTATGTT 57.853 34.615 0.00 0.00 0.00 2.71
223 227 9.263446 ACTTACACAATTCCCTAGACTATGTTA 57.737 33.333 0.00 0.00 0.00 2.41
224 228 9.530633 CTTACACAATTCCCTAGACTATGTTAC 57.469 37.037 0.00 0.00 0.00 2.50
225 229 7.735326 ACACAATTCCCTAGACTATGTTACT 57.265 36.000 0.00 0.00 0.00 2.24
226 230 8.834004 ACACAATTCCCTAGACTATGTTACTA 57.166 34.615 0.00 0.00 0.00 1.82
227 231 8.693625 ACACAATTCCCTAGACTATGTTACTAC 58.306 37.037 0.00 0.00 0.00 2.73
228 232 8.142551 CACAATTCCCTAGACTATGTTACTACC 58.857 40.741 0.00 0.00 0.00 3.18
229 233 8.066247 ACAATTCCCTAGACTATGTTACTACCT 58.934 37.037 0.00 0.00 0.00 3.08
230 234 8.925338 CAATTCCCTAGACTATGTTACTACCTT 58.075 37.037 0.00 0.00 0.00 3.50
231 235 8.709272 ATTCCCTAGACTATGTTACTACCTTC 57.291 38.462 0.00 0.00 0.00 3.46
232 236 7.217028 TCCCTAGACTATGTTACTACCTTCA 57.783 40.000 0.00 0.00 0.00 3.02
233 237 7.823635 TCCCTAGACTATGTTACTACCTTCAT 58.176 38.462 0.00 0.00 0.00 2.57
234 238 8.952602 TCCCTAGACTATGTTACTACCTTCATA 58.047 37.037 0.00 0.00 0.00 2.15
235 239 9.233649 CCCTAGACTATGTTACTACCTTCATAG 57.766 40.741 8.77 8.77 42.80 2.23
238 242 8.466617 AGACTATGTTACTACCTTCATAGTGG 57.533 38.462 17.43 0.00 46.89 4.00
239 243 7.506261 AGACTATGTTACTACCTTCATAGTGGG 59.494 40.741 17.43 0.00 46.89 4.61
240 244 7.130775 ACTATGTTACTACCTTCATAGTGGGT 58.869 38.462 13.45 0.00 45.91 4.51
241 245 8.284435 ACTATGTTACTACCTTCATAGTGGGTA 58.716 37.037 13.45 0.00 45.91 3.69
246 250 5.532664 CTACCTTCATAGTGGGTAGGAAC 57.467 47.826 9.71 0.00 45.09 3.62
247 251 3.798515 ACCTTCATAGTGGGTAGGAACA 58.201 45.455 0.00 0.00 28.58 3.18
248 252 4.371681 ACCTTCATAGTGGGTAGGAACAT 58.628 43.478 0.00 0.00 28.58 2.71
249 253 4.409247 ACCTTCATAGTGGGTAGGAACATC 59.591 45.833 0.00 0.00 28.58 3.06
250 254 4.656112 CCTTCATAGTGGGTAGGAACATCT 59.344 45.833 0.00 0.00 28.58 2.90
251 255 5.839063 CCTTCATAGTGGGTAGGAACATCTA 59.161 44.000 0.00 0.00 28.58 1.98
252 256 6.498651 CCTTCATAGTGGGTAGGAACATCTAT 59.501 42.308 0.00 0.00 28.58 1.98
253 257 6.918067 TCATAGTGGGTAGGAACATCTATG 57.082 41.667 0.00 0.00 35.64 2.23
254 258 6.382087 TCATAGTGGGTAGGAACATCTATGT 58.618 40.000 0.00 0.00 44.20 2.29
255 259 7.532199 TCATAGTGGGTAGGAACATCTATGTA 58.468 38.462 0.00 0.00 40.80 2.29
256 260 7.670140 TCATAGTGGGTAGGAACATCTATGTAG 59.330 40.741 0.00 0.00 40.80 2.74
257 261 5.778542 AGTGGGTAGGAACATCTATGTAGT 58.221 41.667 0.00 0.00 40.80 2.73
258 262 5.598830 AGTGGGTAGGAACATCTATGTAGTG 59.401 44.000 0.00 0.00 40.80 2.74
259 263 5.363005 GTGGGTAGGAACATCTATGTAGTGT 59.637 44.000 0.00 0.00 40.80 3.55
260 264 5.597182 TGGGTAGGAACATCTATGTAGTGTC 59.403 44.000 0.00 0.00 40.80 3.67
261 265 5.597182 GGGTAGGAACATCTATGTAGTGTCA 59.403 44.000 0.00 0.00 40.80 3.58
262 266 6.267928 GGGTAGGAACATCTATGTAGTGTCAT 59.732 42.308 0.00 0.00 40.80 3.06
263 267 7.148641 GGTAGGAACATCTATGTAGTGTCATG 58.851 42.308 0.00 0.00 40.80 3.07
264 268 5.605534 AGGAACATCTATGTAGTGTCATGC 58.394 41.667 0.00 0.00 40.80 4.06
265 269 5.129320 AGGAACATCTATGTAGTGTCATGCA 59.871 40.000 0.00 0.00 40.80 3.96
266 270 5.817296 GGAACATCTATGTAGTGTCATGCAA 59.183 40.000 0.00 0.00 40.80 4.08
267 271 6.238211 GGAACATCTATGTAGTGTCATGCAAC 60.238 42.308 0.00 0.00 40.80 4.17
268 272 4.805719 ACATCTATGTAGTGTCATGCAACG 59.194 41.667 0.00 0.00 39.68 4.10
269 273 4.712122 TCTATGTAGTGTCATGCAACGA 57.288 40.909 0.00 0.00 0.00 3.85
270 274 5.262588 TCTATGTAGTGTCATGCAACGAT 57.737 39.130 0.00 0.00 0.00 3.73
271 275 5.043248 TCTATGTAGTGTCATGCAACGATG 58.957 41.667 0.00 0.00 0.00 3.84
272 276 3.038788 TGTAGTGTCATGCAACGATGT 57.961 42.857 0.00 0.00 0.00 3.06
273 277 4.181309 TGTAGTGTCATGCAACGATGTA 57.819 40.909 0.00 0.00 0.00 2.29
274 278 4.754322 TGTAGTGTCATGCAACGATGTAT 58.246 39.130 0.00 0.00 31.41 2.29
275 279 5.175127 TGTAGTGTCATGCAACGATGTATT 58.825 37.500 0.00 0.00 28.42 1.89
276 280 5.641636 TGTAGTGTCATGCAACGATGTATTT 59.358 36.000 0.00 0.00 28.42 1.40
277 281 6.814146 TGTAGTGTCATGCAACGATGTATTTA 59.186 34.615 0.00 0.00 28.42 1.40
278 282 6.925610 AGTGTCATGCAACGATGTATTTAT 57.074 33.333 0.00 0.00 28.42 1.40
279 283 7.320443 AGTGTCATGCAACGATGTATTTATT 57.680 32.000 0.00 0.00 28.42 1.40
280 284 8.432110 AGTGTCATGCAACGATGTATTTATTA 57.568 30.769 0.00 0.00 28.42 0.98
281 285 8.551205 AGTGTCATGCAACGATGTATTTATTAG 58.449 33.333 0.00 0.00 28.42 1.73
282 286 7.798516 GTGTCATGCAACGATGTATTTATTAGG 59.201 37.037 0.00 0.00 28.42 2.69
283 287 7.497579 TGTCATGCAACGATGTATTTATTAGGT 59.502 33.333 0.00 0.00 28.42 3.08
284 288 8.342634 GTCATGCAACGATGTATTTATTAGGTT 58.657 33.333 0.00 0.00 28.42 3.50
285 289 9.549078 TCATGCAACGATGTATTTATTAGGTTA 57.451 29.630 0.00 0.00 28.42 2.85
310 314 8.954950 ATAGACTCATTATTTCTTGGAGTGTG 57.045 34.615 0.00 0.00 38.82 3.82
311 315 5.645497 AGACTCATTATTTCTTGGAGTGTGC 59.355 40.000 0.00 0.00 38.82 4.57
312 316 4.393062 ACTCATTATTTCTTGGAGTGTGCG 59.607 41.667 0.00 0.00 37.43 5.34
313 317 4.574892 TCATTATTTCTTGGAGTGTGCGA 58.425 39.130 0.00 0.00 0.00 5.10
314 318 5.185454 TCATTATTTCTTGGAGTGTGCGAT 58.815 37.500 0.00 0.00 0.00 4.58
315 319 4.944962 TTATTTCTTGGAGTGTGCGATG 57.055 40.909 0.00 0.00 0.00 3.84
316 320 2.254546 TTTCTTGGAGTGTGCGATGT 57.745 45.000 0.00 0.00 0.00 3.06
317 321 2.254546 TTCTTGGAGTGTGCGATGTT 57.745 45.000 0.00 0.00 0.00 2.71
318 322 1.795768 TCTTGGAGTGTGCGATGTTC 58.204 50.000 0.00 0.00 0.00 3.18
319 323 0.798776 CTTGGAGTGTGCGATGTTCC 59.201 55.000 0.00 0.00 0.00 3.62
320 324 0.948623 TTGGAGTGTGCGATGTTCCG 60.949 55.000 0.00 0.00 0.00 4.30
321 325 2.100631 GGAGTGTGCGATGTTCCGG 61.101 63.158 0.00 0.00 0.00 5.14
322 326 1.374252 GAGTGTGCGATGTTCCGGT 60.374 57.895 0.00 0.00 0.00 5.28
323 327 0.108992 GAGTGTGCGATGTTCCGGTA 60.109 55.000 0.00 0.00 0.00 4.02
324 328 0.319083 AGTGTGCGATGTTCCGGTAA 59.681 50.000 0.00 0.00 0.00 2.85
325 329 0.441145 GTGTGCGATGTTCCGGTAAC 59.559 55.000 0.00 5.56 38.67 2.50
326 330 0.319083 TGTGCGATGTTCCGGTAACT 59.681 50.000 0.00 0.00 38.99 2.24
327 331 1.270412 TGTGCGATGTTCCGGTAACTT 60.270 47.619 0.00 3.15 38.99 2.66
328 332 2.029200 TGTGCGATGTTCCGGTAACTTA 60.029 45.455 0.00 0.00 38.99 2.24
329 333 2.601763 GTGCGATGTTCCGGTAACTTAG 59.398 50.000 0.00 5.10 38.99 2.18
330 334 1.591619 GCGATGTTCCGGTAACTTAGC 59.408 52.381 0.00 10.85 38.99 3.09
331 335 2.737679 GCGATGTTCCGGTAACTTAGCT 60.738 50.000 19.57 0.00 39.33 3.32
332 336 3.489738 GCGATGTTCCGGTAACTTAGCTA 60.490 47.826 19.57 0.00 39.33 3.32
333 337 4.675510 CGATGTTCCGGTAACTTAGCTAA 58.324 43.478 5.94 5.94 38.99 3.09
334 338 5.287226 CGATGTTCCGGTAACTTAGCTAAT 58.713 41.667 6.64 0.00 38.99 1.73
335 339 5.751990 CGATGTTCCGGTAACTTAGCTAATT 59.248 40.000 6.64 0.00 38.99 1.40
336 340 6.919662 CGATGTTCCGGTAACTTAGCTAATTA 59.080 38.462 6.64 5.60 38.99 1.40
337 341 7.096312 CGATGTTCCGGTAACTTAGCTAATTAC 60.096 40.741 19.73 19.73 38.99 1.89
338 342 6.340522 TGTTCCGGTAACTTAGCTAATTACC 58.659 40.000 27.35 27.35 42.96 2.85
339 343 6.070881 TGTTCCGGTAACTTAGCTAATTACCA 60.071 38.462 31.10 21.50 45.50 3.25
340 344 5.906073 TCCGGTAACTTAGCTAATTACCAC 58.094 41.667 31.10 17.92 45.50 4.16
341 345 5.421693 TCCGGTAACTTAGCTAATTACCACA 59.578 40.000 31.10 22.90 45.50 4.17
342 346 6.070881 TCCGGTAACTTAGCTAATTACCACAA 60.071 38.462 31.10 22.18 45.50 3.33
343 347 6.257193 CCGGTAACTTAGCTAATTACCACAAG 59.743 42.308 31.10 22.98 45.50 3.16
344 348 6.238022 CGGTAACTTAGCTAATTACCACAAGC 60.238 42.308 31.10 17.97 45.50 4.01
345 349 6.596497 GGTAACTTAGCTAATTACCACAAGCA 59.404 38.462 29.51 5.83 44.87 3.91
346 350 6.496338 AACTTAGCTAATTACCACAAGCAC 57.504 37.500 6.64 0.00 37.44 4.40
347 351 4.941873 ACTTAGCTAATTACCACAAGCACC 59.058 41.667 6.64 0.00 37.44 5.01
348 352 3.721087 AGCTAATTACCACAAGCACCT 57.279 42.857 0.00 0.00 37.44 4.00
349 353 3.610911 AGCTAATTACCACAAGCACCTC 58.389 45.455 0.00 0.00 37.44 3.85
350 354 3.264450 AGCTAATTACCACAAGCACCTCT 59.736 43.478 0.00 0.00 37.44 3.69
351 355 3.623510 GCTAATTACCACAAGCACCTCTC 59.376 47.826 0.00 0.00 35.05 3.20
352 356 4.624125 GCTAATTACCACAAGCACCTCTCT 60.624 45.833 0.00 0.00 35.05 3.10
353 357 3.618690 ATTACCACAAGCACCTCTCTC 57.381 47.619 0.00 0.00 0.00 3.20
354 358 2.310779 TACCACAAGCACCTCTCTCT 57.689 50.000 0.00 0.00 0.00 3.10
355 359 1.428869 ACCACAAGCACCTCTCTCTT 58.571 50.000 0.00 0.00 0.00 2.85
356 360 1.346068 ACCACAAGCACCTCTCTCTTC 59.654 52.381 0.00 0.00 0.00 2.87
357 361 1.345741 CCACAAGCACCTCTCTCTTCA 59.654 52.381 0.00 0.00 0.00 3.02
358 362 2.027377 CCACAAGCACCTCTCTCTTCAT 60.027 50.000 0.00 0.00 0.00 2.57
359 363 3.558746 CCACAAGCACCTCTCTCTTCATT 60.559 47.826 0.00 0.00 0.00 2.57
360 364 4.323028 CCACAAGCACCTCTCTCTTCATTA 60.323 45.833 0.00 0.00 0.00 1.90
361 365 5.240891 CACAAGCACCTCTCTCTTCATTAA 58.759 41.667 0.00 0.00 0.00 1.40
362 366 5.702670 CACAAGCACCTCTCTCTTCATTAAA 59.297 40.000 0.00 0.00 0.00 1.52
363 367 6.373774 CACAAGCACCTCTCTCTTCATTAAAT 59.626 38.462 0.00 0.00 0.00 1.40
364 368 7.550551 CACAAGCACCTCTCTCTTCATTAAATA 59.449 37.037 0.00 0.00 0.00 1.40
365 369 8.270744 ACAAGCACCTCTCTCTTCATTAAATAT 58.729 33.333 0.00 0.00 0.00 1.28
366 370 8.557864 CAAGCACCTCTCTCTTCATTAAATATG 58.442 37.037 0.00 0.00 0.00 1.78
367 371 7.800092 AGCACCTCTCTCTTCATTAAATATGT 58.200 34.615 0.00 0.00 0.00 2.29
368 372 7.714377 AGCACCTCTCTCTTCATTAAATATGTG 59.286 37.037 0.00 0.00 0.00 3.21
369 373 7.519649 GCACCTCTCTCTTCATTAAATATGTGC 60.520 40.741 0.00 0.00 35.67 4.57
370 374 6.995091 ACCTCTCTCTTCATTAAATATGTGCC 59.005 38.462 0.00 0.00 0.00 5.01
371 375 6.994496 CCTCTCTCTTCATTAAATATGTGCCA 59.006 38.462 0.00 0.00 0.00 4.92
372 376 7.041508 CCTCTCTCTTCATTAAATATGTGCCAC 60.042 40.741 0.00 0.00 0.00 5.01
373 377 7.337938 TCTCTCTTCATTAAATATGTGCCACA 58.662 34.615 0.00 0.00 0.00 4.17
374 378 7.994911 TCTCTCTTCATTAAATATGTGCCACAT 59.005 33.333 15.69 15.69 42.35 3.21
375 379 9.276590 CTCTCTTCATTAAATATGTGCCACATA 57.723 33.333 19.16 19.16 44.29 2.29
376 380 9.625747 TCTCTTCATTAAATATGTGCCACATAA 57.374 29.630 20.57 7.37 43.50 1.90
377 381 9.888878 CTCTTCATTAAATATGTGCCACATAAG 57.111 33.333 20.57 12.73 43.50 1.73
378 382 8.352201 TCTTCATTAAATATGTGCCACATAAGC 58.648 33.333 20.57 0.00 43.50 3.09
379 383 7.579761 TCATTAAATATGTGCCACATAAGCA 57.420 32.000 20.57 6.59 43.50 3.91
380 384 8.005192 TCATTAAATATGTGCCACATAAGCAA 57.995 30.769 20.57 14.07 43.50 3.91
381 385 8.473219 TCATTAAATATGTGCCACATAAGCAAA 58.527 29.630 20.57 12.83 43.50 3.68
382 386 8.757789 CATTAAATATGTGCCACATAAGCAAAG 58.242 33.333 20.57 8.50 43.50 2.77
383 387 5.920193 AATATGTGCCACATAAGCAAAGT 57.080 34.783 20.57 0.54 43.50 2.66
384 388 5.920193 ATATGTGCCACATAAGCAAAGTT 57.080 34.783 20.57 0.00 43.50 2.66
385 389 3.367992 TGTGCCACATAAGCAAAGTTG 57.632 42.857 0.00 0.00 43.02 3.16
386 390 2.692557 TGTGCCACATAAGCAAAGTTGT 59.307 40.909 0.00 0.00 43.02 3.32
387 391 3.885901 TGTGCCACATAAGCAAAGTTGTA 59.114 39.130 0.00 0.00 43.02 2.41
388 392 4.522405 TGTGCCACATAAGCAAAGTTGTAT 59.478 37.500 0.00 0.00 43.02 2.29
389 393 5.010516 TGTGCCACATAAGCAAAGTTGTATT 59.989 36.000 0.00 0.00 43.02 1.89
390 394 5.345741 GTGCCACATAAGCAAAGTTGTATTG 59.654 40.000 0.00 0.00 43.02 1.90
391 395 4.864247 GCCACATAAGCAAAGTTGTATTGG 59.136 41.667 0.00 0.00 0.00 3.16
392 396 5.336372 GCCACATAAGCAAAGTTGTATTGGA 60.336 40.000 0.00 0.00 0.00 3.53
393 397 6.324819 CCACATAAGCAAAGTTGTATTGGAG 58.675 40.000 0.00 0.00 0.00 3.86
394 398 6.071952 CCACATAAGCAAAGTTGTATTGGAGT 60.072 38.462 0.00 0.00 0.00 3.85
395 399 6.803320 CACATAAGCAAAGTTGTATTGGAGTG 59.197 38.462 0.00 0.00 0.00 3.51
396 400 6.490040 ACATAAGCAAAGTTGTATTGGAGTGT 59.510 34.615 0.00 0.00 0.00 3.55
397 401 4.836125 AGCAAAGTTGTATTGGAGTGTG 57.164 40.909 0.00 0.00 0.00 3.82
398 402 4.207165 AGCAAAGTTGTATTGGAGTGTGT 58.793 39.130 0.00 0.00 0.00 3.72
399 403 4.036734 AGCAAAGTTGTATTGGAGTGTGTG 59.963 41.667 0.00 0.00 0.00 3.82
400 404 4.036262 GCAAAGTTGTATTGGAGTGTGTGA 59.964 41.667 0.00 0.00 0.00 3.58
401 405 5.278463 GCAAAGTTGTATTGGAGTGTGTGAT 60.278 40.000 0.00 0.00 0.00 3.06
402 406 5.947228 AAGTTGTATTGGAGTGTGTGATG 57.053 39.130 0.00 0.00 0.00 3.07
403 407 4.973168 AGTTGTATTGGAGTGTGTGATGT 58.027 39.130 0.00 0.00 0.00 3.06
404 408 5.376625 AGTTGTATTGGAGTGTGTGATGTT 58.623 37.500 0.00 0.00 0.00 2.71
405 409 6.530120 AGTTGTATTGGAGTGTGTGATGTTA 58.470 36.000 0.00 0.00 0.00 2.41
406 410 6.426937 AGTTGTATTGGAGTGTGTGATGTTAC 59.573 38.462 0.00 0.00 0.00 2.50
407 411 6.109156 TGTATTGGAGTGTGTGATGTTACT 57.891 37.500 0.00 0.00 0.00 2.24
408 412 6.163476 TGTATTGGAGTGTGTGATGTTACTC 58.837 40.000 0.00 0.00 38.98 2.59
414 418 6.026947 GAGTGTGTGATGTTACTCCTAAGT 57.973 41.667 0.00 0.00 39.66 2.24
415 419 6.420913 AGTGTGTGATGTTACTCCTAAGTT 57.579 37.500 0.00 0.00 36.92 2.66
416 420 6.456501 AGTGTGTGATGTTACTCCTAAGTTC 58.543 40.000 0.00 0.00 36.92 3.01
417 421 5.638234 GTGTGTGATGTTACTCCTAAGTTCC 59.362 44.000 0.00 0.00 36.92 3.62
418 422 5.542635 TGTGTGATGTTACTCCTAAGTTCCT 59.457 40.000 0.00 0.00 36.92 3.36
419 423 6.100668 GTGTGATGTTACTCCTAAGTTCCTC 58.899 44.000 0.00 0.00 36.92 3.71
420 424 5.187186 TGTGATGTTACTCCTAAGTTCCTCC 59.813 44.000 0.00 0.00 36.92 4.30
421 425 4.715297 TGATGTTACTCCTAAGTTCCTCCC 59.285 45.833 0.00 0.00 36.92 4.30
422 426 3.447950 TGTTACTCCTAAGTTCCTCCCC 58.552 50.000 0.00 0.00 36.92 4.81
423 427 3.181404 TGTTACTCCTAAGTTCCTCCCCA 60.181 47.826 0.00 0.00 36.92 4.96
424 428 2.972153 ACTCCTAAGTTCCTCCCCAT 57.028 50.000 0.00 0.00 28.74 4.00
425 429 3.222394 ACTCCTAAGTTCCTCCCCATT 57.778 47.619 0.00 0.00 28.74 3.16
426 430 2.846827 ACTCCTAAGTTCCTCCCCATTG 59.153 50.000 0.00 0.00 28.74 2.82
427 431 2.846827 CTCCTAAGTTCCTCCCCATTGT 59.153 50.000 0.00 0.00 0.00 2.71
428 432 2.576191 TCCTAAGTTCCTCCCCATTGTG 59.424 50.000 0.00 0.00 0.00 3.33
429 433 2.576191 CCTAAGTTCCTCCCCATTGTGA 59.424 50.000 0.00 0.00 0.00 3.58
430 434 2.586648 AAGTTCCTCCCCATTGTGAC 57.413 50.000 0.00 0.00 0.00 3.67
431 435 0.698818 AGTTCCTCCCCATTGTGACC 59.301 55.000 0.00 0.00 0.00 4.02
432 436 0.404040 GTTCCTCCCCATTGTGACCA 59.596 55.000 0.00 0.00 0.00 4.02
433 437 0.698238 TTCCTCCCCATTGTGACCAG 59.302 55.000 0.00 0.00 0.00 4.00
434 438 1.379044 CCTCCCCATTGTGACCAGC 60.379 63.158 0.00 0.00 0.00 4.85
435 439 1.379044 CTCCCCATTGTGACCAGCC 60.379 63.158 0.00 0.00 0.00 4.85
436 440 1.852157 TCCCCATTGTGACCAGCCT 60.852 57.895 0.00 0.00 0.00 4.58
437 441 0.548926 TCCCCATTGTGACCAGCCTA 60.549 55.000 0.00 0.00 0.00 3.93
438 442 0.394352 CCCCATTGTGACCAGCCTAC 60.394 60.000 0.00 0.00 0.00 3.18
439 443 0.327924 CCCATTGTGACCAGCCTACA 59.672 55.000 0.00 0.00 0.00 2.74
440 444 1.064463 CCCATTGTGACCAGCCTACAT 60.064 52.381 0.00 0.00 0.00 2.29
441 445 2.019249 CCATTGTGACCAGCCTACATG 58.981 52.381 0.00 0.00 0.00 3.21
442 446 2.019249 CATTGTGACCAGCCTACATGG 58.981 52.381 0.00 0.00 43.87 3.66
443 447 1.357137 TTGTGACCAGCCTACATGGA 58.643 50.000 0.00 0.00 40.51 3.41
444 448 1.357137 TGTGACCAGCCTACATGGAA 58.643 50.000 0.00 0.00 40.51 3.53
445 449 1.278985 TGTGACCAGCCTACATGGAAG 59.721 52.381 0.00 0.00 40.51 3.46
446 450 1.279271 GTGACCAGCCTACATGGAAGT 59.721 52.381 0.00 0.00 40.51 3.01
447 451 2.500098 GTGACCAGCCTACATGGAAGTA 59.500 50.000 0.00 0.00 40.51 2.24
448 452 3.134804 GTGACCAGCCTACATGGAAGTAT 59.865 47.826 0.00 0.00 40.51 2.12
452 456 3.643320 CCAGCCTACATGGAAGTATGAGA 59.357 47.826 0.00 0.00 40.51 3.27
457 461 6.435904 AGCCTACATGGAAGTATGAGAGATAC 59.564 42.308 0.00 0.00 38.35 2.24
461 465 5.244851 ACATGGAAGTATGAGAGATACGCAT 59.755 40.000 0.00 0.00 41.52 4.73
481 485 5.291614 CGCATATCCCAACAAAGGATTTTTG 59.708 40.000 0.00 0.00 41.52 2.44
490 494 7.173047 CCCAACAAAGGATTTTTGGTTCATAAG 59.827 37.037 5.93 0.00 40.94 1.73
492 496 8.764287 CAACAAAGGATTTTTGGTTCATAAGAC 58.236 33.333 4.84 0.00 35.03 3.01
493 497 8.250143 ACAAAGGATTTTTGGTTCATAAGACT 57.750 30.769 4.84 0.00 35.03 3.24
494 498 9.362151 ACAAAGGATTTTTGGTTCATAAGACTA 57.638 29.630 4.84 0.00 35.03 2.59
495 499 9.846248 CAAAGGATTTTTGGTTCATAAGACTAG 57.154 33.333 0.00 0.00 35.03 2.57
496 500 7.631717 AGGATTTTTGGTTCATAAGACTAGC 57.368 36.000 0.00 0.00 0.00 3.42
497 501 6.603599 AGGATTTTTGGTTCATAAGACTAGCC 59.396 38.462 0.00 0.00 0.00 3.93
499 503 6.569179 TTTTTGGTTCATAAGACTAGCCAC 57.431 37.500 0.00 0.00 0.00 5.01
500 504 4.901197 TTGGTTCATAAGACTAGCCACA 57.099 40.909 0.00 0.00 0.00 4.17
501 505 4.471904 TGGTTCATAAGACTAGCCACAG 57.528 45.455 0.00 0.00 0.00 3.66
502 506 3.838317 TGGTTCATAAGACTAGCCACAGT 59.162 43.478 0.00 0.00 0.00 3.55
503 507 4.184629 GGTTCATAAGACTAGCCACAGTG 58.815 47.826 0.00 0.00 0.00 3.66
504 508 4.184629 GTTCATAAGACTAGCCACAGTGG 58.815 47.826 16.16 16.16 41.55 4.00
505 509 2.766263 TCATAAGACTAGCCACAGTGGG 59.234 50.000 21.77 7.25 38.19 4.61
506 510 2.615986 TAAGACTAGCCACAGTGGGA 57.384 50.000 21.77 0.00 38.19 4.37
507 511 1.270907 AAGACTAGCCACAGTGGGAG 58.729 55.000 21.77 0.00 38.19 4.30
508 512 0.115349 AGACTAGCCACAGTGGGAGT 59.885 55.000 21.77 2.87 38.19 3.85
509 513 1.358103 AGACTAGCCACAGTGGGAGTA 59.642 52.381 21.77 0.00 38.19 2.59
510 514 2.176889 GACTAGCCACAGTGGGAGTAA 58.823 52.381 21.77 0.00 38.19 2.24
511 515 1.900486 ACTAGCCACAGTGGGAGTAAC 59.100 52.381 21.77 3.06 38.19 2.50
512 516 2.180276 CTAGCCACAGTGGGAGTAACT 58.820 52.381 21.77 10.69 38.19 2.24
513 517 1.435256 AGCCACAGTGGGAGTAACTT 58.565 50.000 21.77 0.00 38.19 2.66
514 518 1.348036 AGCCACAGTGGGAGTAACTTC 59.652 52.381 21.77 0.78 38.19 3.01
515 519 1.071699 GCCACAGTGGGAGTAACTTCA 59.928 52.381 21.77 0.00 38.19 3.02
516 520 2.872038 GCCACAGTGGGAGTAACTTCAG 60.872 54.545 21.77 0.00 38.19 3.02
517 521 2.417719 CACAGTGGGAGTAACTTCAGC 58.582 52.381 0.00 0.00 0.00 4.26
518 522 2.047061 ACAGTGGGAGTAACTTCAGCA 58.953 47.619 0.00 0.00 0.00 4.41
519 523 2.037772 ACAGTGGGAGTAACTTCAGCAG 59.962 50.000 0.00 0.00 0.00 4.24
520 524 2.037772 CAGTGGGAGTAACTTCAGCAGT 59.962 50.000 0.00 0.00 37.30 4.40
521 525 3.258372 CAGTGGGAGTAACTTCAGCAGTA 59.742 47.826 0.00 0.00 32.94 2.74
522 526 3.901844 AGTGGGAGTAACTTCAGCAGTAA 59.098 43.478 0.00 0.00 32.94 2.24
523 527 3.995048 GTGGGAGTAACTTCAGCAGTAAC 59.005 47.826 0.00 0.00 32.94 2.50
524 528 3.901844 TGGGAGTAACTTCAGCAGTAACT 59.098 43.478 0.00 0.00 32.94 2.24
525 529 4.347000 TGGGAGTAACTTCAGCAGTAACTT 59.653 41.667 0.00 0.00 32.94 2.66
526 530 4.930405 GGGAGTAACTTCAGCAGTAACTTC 59.070 45.833 0.00 0.00 32.94 3.01
527 531 5.510861 GGGAGTAACTTCAGCAGTAACTTCA 60.511 44.000 0.00 0.00 32.94 3.02
528 532 5.989777 GGAGTAACTTCAGCAGTAACTTCAA 59.010 40.000 0.00 0.00 32.94 2.69
529 533 6.146347 GGAGTAACTTCAGCAGTAACTTCAAG 59.854 42.308 0.00 0.00 32.94 3.02
530 534 6.583562 AGTAACTTCAGCAGTAACTTCAAGT 58.416 36.000 0.00 0.00 32.94 3.16
531 535 5.993106 AACTTCAGCAGTAACTTCAAGTC 57.007 39.130 0.00 0.00 32.94 3.01
532 536 4.381411 ACTTCAGCAGTAACTTCAAGTCC 58.619 43.478 0.00 0.00 31.97 3.85
533 537 4.141711 ACTTCAGCAGTAACTTCAAGTCCA 60.142 41.667 0.00 0.00 31.97 4.02
534 538 4.415881 TCAGCAGTAACTTCAAGTCCAA 57.584 40.909 0.00 0.00 0.00 3.53
535 539 4.127171 TCAGCAGTAACTTCAAGTCCAAC 58.873 43.478 0.00 0.00 0.00 3.77
536 540 4.130118 CAGCAGTAACTTCAAGTCCAACT 58.870 43.478 0.00 0.00 0.00 3.16
537 541 4.024556 CAGCAGTAACTTCAAGTCCAACTG 60.025 45.833 17.42 17.42 36.89 3.16
538 542 4.127171 GCAGTAACTTCAAGTCCAACTGA 58.873 43.478 22.62 0.00 36.39 3.41
539 543 4.212214 GCAGTAACTTCAAGTCCAACTGAG 59.788 45.833 22.62 6.35 36.39 3.35
540 544 4.212214 CAGTAACTTCAAGTCCAACTGAGC 59.788 45.833 17.04 0.00 36.39 4.26
541 545 3.281727 AACTTCAAGTCCAACTGAGCA 57.718 42.857 0.00 0.00 0.00 4.26
542 546 3.281727 ACTTCAAGTCCAACTGAGCAA 57.718 42.857 0.00 0.00 0.00 3.91
543 547 3.620488 ACTTCAAGTCCAACTGAGCAAA 58.380 40.909 0.00 0.00 0.00 3.68
544 548 4.210331 ACTTCAAGTCCAACTGAGCAAAT 58.790 39.130 0.00 0.00 0.00 2.32
545 549 4.646492 ACTTCAAGTCCAACTGAGCAAATT 59.354 37.500 0.00 0.00 0.00 1.82
546 550 5.127682 ACTTCAAGTCCAACTGAGCAAATTT 59.872 36.000 0.00 0.00 0.00 1.82
547 551 4.935702 TCAAGTCCAACTGAGCAAATTTG 58.064 39.130 14.03 14.03 0.00 2.32
548 552 4.402155 TCAAGTCCAACTGAGCAAATTTGT 59.598 37.500 19.03 6.52 0.00 2.83
549 553 4.574599 AGTCCAACTGAGCAAATTTGTC 57.425 40.909 19.03 14.71 0.00 3.18
550 554 4.210331 AGTCCAACTGAGCAAATTTGTCT 58.790 39.130 19.03 15.66 0.00 3.41
551 555 5.376625 AGTCCAACTGAGCAAATTTGTCTA 58.623 37.500 19.03 5.35 0.00 2.59
552 556 6.006449 AGTCCAACTGAGCAAATTTGTCTAT 58.994 36.000 19.03 3.84 0.00 1.98
553 557 6.072286 AGTCCAACTGAGCAAATTTGTCTATG 60.072 38.462 19.03 13.44 0.00 2.23
554 558 5.769662 TCCAACTGAGCAAATTTGTCTATGT 59.230 36.000 19.03 13.94 0.00 2.29
555 559 5.860182 CCAACTGAGCAAATTTGTCTATGTG 59.140 40.000 19.03 10.85 0.00 3.21
556 560 5.633830 ACTGAGCAAATTTGTCTATGTGG 57.366 39.130 19.03 8.33 0.00 4.17
557 561 4.082571 ACTGAGCAAATTTGTCTATGTGGC 60.083 41.667 19.03 1.86 0.00 5.01
558 562 3.825585 TGAGCAAATTTGTCTATGTGGCA 59.174 39.130 19.03 7.43 0.00 4.92
559 563 4.280425 TGAGCAAATTTGTCTATGTGGCAA 59.720 37.500 19.03 0.00 38.67 4.52
560 564 5.047164 TGAGCAAATTTGTCTATGTGGCAAT 60.047 36.000 19.03 0.00 40.27 3.56
561 565 5.172934 AGCAAATTTGTCTATGTGGCAATG 58.827 37.500 19.03 0.00 40.27 2.82
562 566 5.047164 AGCAAATTTGTCTATGTGGCAATGA 60.047 36.000 19.03 0.00 40.27 2.57
563 567 5.290158 GCAAATTTGTCTATGTGGCAATGAG 59.710 40.000 19.03 0.00 40.27 2.90
564 568 6.392354 CAAATTTGTCTATGTGGCAATGAGT 58.608 36.000 10.15 0.00 40.27 3.41
565 569 6.594788 AATTTGTCTATGTGGCAATGAGTT 57.405 33.333 0.00 0.00 40.27 3.01
566 570 7.701539 AATTTGTCTATGTGGCAATGAGTTA 57.298 32.000 0.00 0.00 40.27 2.24
567 571 7.701539 ATTTGTCTATGTGGCAATGAGTTAA 57.298 32.000 0.00 0.00 40.27 2.01
568 572 7.701539 TTTGTCTATGTGGCAATGAGTTAAT 57.298 32.000 0.00 0.00 40.27 1.40
569 573 6.682423 TGTCTATGTGGCAATGAGTTAATG 57.318 37.500 0.00 0.00 0.00 1.90
570 574 5.589855 TGTCTATGTGGCAATGAGTTAATGG 59.410 40.000 0.00 0.00 0.00 3.16
571 575 5.822519 GTCTATGTGGCAATGAGTTAATGGA 59.177 40.000 0.00 0.00 0.00 3.41
572 576 6.017605 GTCTATGTGGCAATGAGTTAATGGAG 60.018 42.308 0.00 0.00 0.00 3.86
573 577 4.299586 TGTGGCAATGAGTTAATGGAGA 57.700 40.909 0.00 0.00 0.00 3.71
574 578 4.264253 TGTGGCAATGAGTTAATGGAGAG 58.736 43.478 0.00 0.00 0.00 3.20
575 579 4.019411 TGTGGCAATGAGTTAATGGAGAGA 60.019 41.667 0.00 0.00 0.00 3.10
576 580 4.574013 GTGGCAATGAGTTAATGGAGAGAG 59.426 45.833 0.00 0.00 0.00 3.20
577 581 4.471025 TGGCAATGAGTTAATGGAGAGAGA 59.529 41.667 0.00 0.00 0.00 3.10
578 582 5.055812 GGCAATGAGTTAATGGAGAGAGAG 58.944 45.833 0.00 0.00 0.00 3.20
582 586 7.432869 CAATGAGTTAATGGAGAGAGAGGTAG 58.567 42.308 0.00 0.00 0.00 3.18
584 588 6.494952 TGAGTTAATGGAGAGAGAGGTAGTT 58.505 40.000 0.00 0.00 0.00 2.24
585 589 6.603997 TGAGTTAATGGAGAGAGAGGTAGTTC 59.396 42.308 0.00 0.00 0.00 3.01
591 595 6.887886 TGGAGAGAGAGGTAGTTCTAGTAA 57.112 41.667 0.00 0.00 0.00 2.24
593 597 6.444493 TGGAGAGAGAGGTAGTTCTAGTAACT 59.556 42.308 10.91 10.91 0.00 2.24
615 619 8.983307 AACTTAGCTAGTTACTGTAACATCAC 57.017 34.615 27.12 15.70 45.22 3.06
616 620 8.118976 ACTTAGCTAGTTACTGTAACATCACA 57.881 34.615 27.12 10.61 41.07 3.58
617 621 8.027771 ACTTAGCTAGTTACTGTAACATCACAC 58.972 37.037 27.12 13.16 41.07 3.82
619 623 6.936279 AGCTAGTTACTGTAACATCACACAT 58.064 36.000 27.12 10.64 41.07 3.21
621 625 8.696374 AGCTAGTTACTGTAACATCACACATAT 58.304 33.333 27.12 9.43 41.07 1.78
622 626 8.969267 GCTAGTTACTGTAACATCACACATATC 58.031 37.037 27.12 5.73 41.07 1.63
625 629 9.371136 AGTTACTGTAACATCACACATATCAAG 57.629 33.333 27.12 0.00 41.07 3.02
626 630 8.604035 GTTACTGTAACATCACACATATCAAGG 58.396 37.037 22.30 0.00 38.52 3.61
627 631 5.586243 ACTGTAACATCACACATATCAAGGC 59.414 40.000 0.00 0.00 0.00 4.35
629 681 5.942826 TGTAACATCACACATATCAAGGCAA 59.057 36.000 0.00 0.00 0.00 4.52
630 682 5.571784 AACATCACACATATCAAGGCAAG 57.428 39.130 0.00 0.00 0.00 4.01
635 687 5.121105 TCACACATATCAAGGCAAGATGAG 58.879 41.667 2.43 0.00 0.00 2.90
636 688 4.880120 CACACATATCAAGGCAAGATGAGT 59.120 41.667 2.43 0.00 0.00 3.41
639 691 6.098838 ACACATATCAAGGCAAGATGAGTCTA 59.901 38.462 2.43 0.00 33.30 2.59
642 694 8.530311 ACATATCAAGGCAAGATGAGTCTATAG 58.470 37.037 0.00 0.00 33.30 1.31
672 724 9.801873 AATAAATGAAGTATTGCATGTTACCAC 57.198 29.630 0.00 0.00 0.00 4.16
673 725 6.832520 AATGAAGTATTGCATGTTACCACA 57.167 33.333 0.00 0.00 37.31 4.17
680 765 6.828273 AGTATTGCATGTTACCACACATATGT 59.172 34.615 1.41 1.41 40.80 2.29
683 768 7.637631 TTGCATGTTACCACACATATGTTAT 57.362 32.000 5.37 0.00 36.72 1.89
685 770 8.060931 TGCATGTTACCACACATATGTTATTT 57.939 30.769 5.37 0.00 36.72 1.40
686 771 8.187480 TGCATGTTACCACACATATGTTATTTC 58.813 33.333 5.37 0.00 36.72 2.17
687 772 7.647715 GCATGTTACCACACATATGTTATTTCC 59.352 37.037 5.37 0.00 36.72 3.13
690 775 7.121463 TGTTACCACACATATGTTATTTCCCAC 59.879 37.037 5.37 0.00 36.72 4.61
693 778 7.582719 ACCACACATATGTTATTTCCCACTAT 58.417 34.615 5.37 0.00 36.72 2.12
694 779 8.719596 ACCACACATATGTTATTTCCCACTATA 58.280 33.333 5.37 0.00 36.72 1.31
704 789 9.940974 TGTTATTTCCCACTATAGAGGTAGTAA 57.059 33.333 14.29 8.88 33.29 2.24
709 794 9.584008 TTTCCCACTATAGAGGTAGTAACATAG 57.416 37.037 14.29 0.00 33.29 2.23
711 796 8.604184 TCCCACTATAGAGGTAGTAACATAGAG 58.396 40.741 14.29 0.00 33.29 2.43
719 804 8.885494 AGAGGTAGTAACATAGAGTAGTAACG 57.115 38.462 0.00 0.00 0.00 3.18
721 806 8.430801 AGGTAGTAACATAGAGTAGTAACGTG 57.569 38.462 0.00 0.00 0.00 4.49
722 807 7.011857 AGGTAGTAACATAGAGTAGTAACGTGC 59.988 40.741 0.00 0.00 0.00 5.34
723 808 6.129053 AGTAACATAGAGTAGTAACGTGCC 57.871 41.667 0.00 0.00 0.00 5.01
727 812 5.135383 ACATAGAGTAGTAACGTGCCCATA 58.865 41.667 0.00 0.00 0.00 2.74
728 813 5.773680 ACATAGAGTAGTAACGTGCCCATAT 59.226 40.000 0.00 0.00 0.00 1.78
736 821 6.081872 AGTAACGTGCCCATATTACTACTC 57.918 41.667 0.00 0.00 36.37 2.59
741 826 5.773680 ACGTGCCCATATTACTACTCTATGT 59.226 40.000 0.00 0.00 0.00 2.29
801 1037 2.432510 CCCTCCTCTACATGGAAGTGTC 59.567 54.545 0.00 0.00 33.62 3.67
838 1074 3.922375 TCCCAACAGAGGATTTTTGGTT 58.078 40.909 0.00 0.00 37.41 3.67
858 1094 6.105333 TGGTTCATAATAAATGCAGCCAAAC 58.895 36.000 0.00 0.00 0.00 2.93
862 1098 5.424895 TCATAATAAATGCAGCCAAACCCTT 59.575 36.000 0.00 0.00 0.00 3.95
877 1113 4.559862 AACCCTTCTCTACATGGAAGTG 57.440 45.455 0.00 0.00 37.73 3.16
1034 1570 3.858247 AGTTAATTAGCCAGTCGGTGTC 58.142 45.455 0.00 0.00 33.28 3.67
1054 1593 7.538575 GGTGTCTTTGCATTTCTACAACATAT 58.461 34.615 0.00 0.00 0.00 1.78
1142 1687 2.316867 CGCCACTGTTGACGATGCA 61.317 57.895 0.00 0.00 0.00 3.96
1318 1863 0.685097 AGGTACAGCGTTGTCACCAT 59.315 50.000 22.79 11.88 38.76 3.55
1422 1967 0.033228 CCAACGCCCATTTCAGCAAA 59.967 50.000 0.00 0.00 0.00 3.68
1531 2076 1.227853 GCAAGTTCCACGTCACCCT 60.228 57.895 0.00 0.00 0.00 4.34
1655 2212 3.119193 CACAGCAGCACGGGTTTT 58.881 55.556 0.00 0.00 0.00 2.43
1769 2326 3.055458 GCTTCTCCTACTGCCTCTTCTTT 60.055 47.826 0.00 0.00 0.00 2.52
1771 2328 4.054359 TCTCCTACTGCCTCTTCTTTCT 57.946 45.455 0.00 0.00 0.00 2.52
1784 2341 1.373748 CTTTCTCGGGTCGGCGAAA 60.374 57.895 12.92 0.00 0.00 3.46
1947 2504 2.397413 CTTGGCGGAGGTGTTCAGGT 62.397 60.000 0.00 0.00 0.00 4.00
2232 2804 1.508088 CAAGACATTTGCCTCGCCC 59.492 57.895 0.00 0.00 0.00 6.13
2472 3075 6.042143 AGAGTGCACAAACAAACAAAATAGG 58.958 36.000 21.04 0.00 0.00 2.57
2582 3187 3.589288 AGTAAAAAGCTGGGAGGATCACT 59.411 43.478 0.00 0.00 41.12 3.41
2711 3318 6.420604 CGGTATGCTTTTTGAAAACAATCAGT 59.579 34.615 0.00 0.00 0.00 3.41
3072 6341 5.758296 AGAAAAGTTACTTGTGATCGCTTGA 59.242 36.000 7.94 0.00 0.00 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 9.411801 GAATTGAAAATCTTTAGTTGGGAGTTC 57.588 33.333 0.00 0.00 0.00 3.01
132 136 3.181476 GGGTTTGGCTGCATTTACTATGG 60.181 47.826 0.50 0.00 0.00 2.74
163 167 0.532115 CTTGCCCATTGTAACCAGCC 59.468 55.000 0.00 0.00 0.00 4.85
164 168 1.544724 TCTTGCCCATTGTAACCAGC 58.455 50.000 0.00 0.00 0.00 4.85
165 169 2.890311 TGTTCTTGCCCATTGTAACCAG 59.110 45.455 0.00 0.00 0.00 4.00
166 170 2.950781 TGTTCTTGCCCATTGTAACCA 58.049 42.857 0.00 0.00 0.00 3.67
167 171 5.650543 CTTATGTTCTTGCCCATTGTAACC 58.349 41.667 0.00 0.00 0.00 2.85
169 173 5.016173 AGCTTATGTTCTTGCCCATTGTAA 58.984 37.500 0.00 0.00 0.00 2.41
170 174 4.599041 AGCTTATGTTCTTGCCCATTGTA 58.401 39.130 0.00 0.00 0.00 2.41
171 175 3.434309 AGCTTATGTTCTTGCCCATTGT 58.566 40.909 0.00 0.00 0.00 2.71
172 176 4.641989 ACTAGCTTATGTTCTTGCCCATTG 59.358 41.667 0.00 0.00 0.00 2.82
173 177 4.860022 ACTAGCTTATGTTCTTGCCCATT 58.140 39.130 0.00 0.00 0.00 3.16
174 178 4.510167 ACTAGCTTATGTTCTTGCCCAT 57.490 40.909 0.00 0.00 0.00 4.00
175 179 5.045869 AGTTACTAGCTTATGTTCTTGCCCA 60.046 40.000 0.00 0.00 0.00 5.36
176 180 5.429130 AGTTACTAGCTTATGTTCTTGCCC 58.571 41.667 0.00 0.00 0.00 5.36
177 181 6.986904 AAGTTACTAGCTTATGTTCTTGCC 57.013 37.500 0.00 0.00 0.00 4.52
178 182 8.381387 GTGTAAGTTACTAGCTTATGTTCTTGC 58.619 37.037 14.00 3.08 32.01 4.01
179 183 9.419297 TGTGTAAGTTACTAGCTTATGTTCTTG 57.581 33.333 14.00 0.00 32.01 3.02
180 184 9.991906 TTGTGTAAGTTACTAGCTTATGTTCTT 57.008 29.630 14.00 1.42 32.01 2.52
184 188 9.379791 GGAATTGTGTAAGTTACTAGCTTATGT 57.620 33.333 14.00 0.00 32.01 2.29
185 189 8.827677 GGGAATTGTGTAAGTTACTAGCTTATG 58.172 37.037 14.00 0.00 32.01 1.90
186 190 8.769359 AGGGAATTGTGTAAGTTACTAGCTTAT 58.231 33.333 14.00 0.00 32.01 1.73
187 191 8.142485 AGGGAATTGTGTAAGTTACTAGCTTA 57.858 34.615 14.00 0.00 0.00 3.09
188 192 7.017319 AGGGAATTGTGTAAGTTACTAGCTT 57.983 36.000 14.00 3.51 0.00 3.74
189 193 6.622427 AGGGAATTGTGTAAGTTACTAGCT 57.378 37.500 14.00 0.00 0.00 3.32
190 194 7.705752 GTCTAGGGAATTGTGTAAGTTACTAGC 59.294 40.741 14.00 5.48 0.00 3.42
191 195 8.968969 AGTCTAGGGAATTGTGTAAGTTACTAG 58.031 37.037 14.00 4.64 0.00 2.57
192 196 8.890410 AGTCTAGGGAATTGTGTAAGTTACTA 57.110 34.615 14.00 1.06 0.00 1.82
193 197 7.793948 AGTCTAGGGAATTGTGTAAGTTACT 57.206 36.000 14.00 0.00 0.00 2.24
194 198 9.530633 CATAGTCTAGGGAATTGTGTAAGTTAC 57.469 37.037 6.06 6.06 0.00 2.50
195 199 9.263446 ACATAGTCTAGGGAATTGTGTAAGTTA 57.737 33.333 0.00 0.00 0.00 2.24
196 200 8.147244 ACATAGTCTAGGGAATTGTGTAAGTT 57.853 34.615 0.00 0.00 0.00 2.66
197 201 7.735326 ACATAGTCTAGGGAATTGTGTAAGT 57.265 36.000 0.00 0.00 0.00 2.24
198 202 9.530633 GTAACATAGTCTAGGGAATTGTGTAAG 57.469 37.037 0.00 0.00 0.00 2.34
199 203 9.263446 AGTAACATAGTCTAGGGAATTGTGTAA 57.737 33.333 0.00 0.00 0.00 2.41
200 204 8.834004 AGTAACATAGTCTAGGGAATTGTGTA 57.166 34.615 0.00 0.00 0.00 2.90
201 205 7.735326 AGTAACATAGTCTAGGGAATTGTGT 57.265 36.000 0.00 0.00 0.00 3.72
202 206 8.142551 GGTAGTAACATAGTCTAGGGAATTGTG 58.857 40.741 0.00 0.00 0.00 3.33
203 207 8.066247 AGGTAGTAACATAGTCTAGGGAATTGT 58.934 37.037 0.00 0.00 0.00 2.71
204 208 8.480133 AGGTAGTAACATAGTCTAGGGAATTG 57.520 38.462 0.00 0.00 0.00 2.32
205 209 9.145442 GAAGGTAGTAACATAGTCTAGGGAATT 57.855 37.037 0.00 0.00 0.00 2.17
206 210 8.287350 TGAAGGTAGTAACATAGTCTAGGGAAT 58.713 37.037 0.00 0.00 0.00 3.01
207 211 7.645942 TGAAGGTAGTAACATAGTCTAGGGAA 58.354 38.462 0.00 0.00 0.00 3.97
208 212 7.217028 TGAAGGTAGTAACATAGTCTAGGGA 57.783 40.000 0.00 0.00 0.00 4.20
209 213 9.233649 CTATGAAGGTAGTAACATAGTCTAGGG 57.766 40.741 0.00 0.00 38.06 3.53
210 214 9.796180 ACTATGAAGGTAGTAACATAGTCTAGG 57.204 37.037 0.00 0.00 46.61 3.02
212 216 9.570468 CCACTATGAAGGTAGTAACATAGTCTA 57.430 37.037 13.37 0.00 46.61 2.59
213 217 7.506261 CCCACTATGAAGGTAGTAACATAGTCT 59.494 40.741 13.37 0.00 46.61 3.24
214 218 7.287235 ACCCACTATGAAGGTAGTAACATAGTC 59.713 40.741 13.37 0.00 46.61 2.59
216 220 7.598759 ACCCACTATGAAGGTAGTAACATAG 57.401 40.000 0.00 0.00 44.14 2.23
217 221 8.701908 CTACCCACTATGAAGGTAGTAACATA 57.298 38.462 7.19 0.00 45.39 2.29
218 222 7.598759 CTACCCACTATGAAGGTAGTAACAT 57.401 40.000 7.19 0.00 45.39 2.71
225 229 4.950361 TGTTCCTACCCACTATGAAGGTA 58.050 43.478 0.00 0.00 35.02 3.08
226 230 3.798515 TGTTCCTACCCACTATGAAGGT 58.201 45.455 0.00 0.00 37.69 3.50
227 231 4.656112 AGATGTTCCTACCCACTATGAAGG 59.344 45.833 0.00 0.00 0.00 3.46
228 232 5.878406 AGATGTTCCTACCCACTATGAAG 57.122 43.478 0.00 0.00 0.00 3.02
229 233 6.844388 ACATAGATGTTCCTACCCACTATGAA 59.156 38.462 1.97 0.00 37.90 2.57
230 234 6.382087 ACATAGATGTTCCTACCCACTATGA 58.618 40.000 1.97 0.00 37.90 2.15
231 235 6.672266 ACATAGATGTTCCTACCCACTATG 57.328 41.667 0.00 0.00 37.90 2.23
232 236 7.451877 CACTACATAGATGTTCCTACCCACTAT 59.548 40.741 0.00 0.00 41.97 2.12
233 237 6.776116 CACTACATAGATGTTCCTACCCACTA 59.224 42.308 0.00 0.00 41.97 2.74
234 238 5.598830 CACTACATAGATGTTCCTACCCACT 59.401 44.000 0.00 0.00 41.97 4.00
235 239 5.363005 ACACTACATAGATGTTCCTACCCAC 59.637 44.000 0.00 0.00 41.97 4.61
236 240 5.525484 ACACTACATAGATGTTCCTACCCA 58.475 41.667 0.00 0.00 41.97 4.51
237 241 5.597182 TGACACTACATAGATGTTCCTACCC 59.403 44.000 0.00 0.00 41.97 3.69
238 242 6.710597 TGACACTACATAGATGTTCCTACC 57.289 41.667 0.00 0.00 41.97 3.18
239 243 6.642950 GCATGACACTACATAGATGTTCCTAC 59.357 42.308 0.00 0.00 41.97 3.18
240 244 6.323739 TGCATGACACTACATAGATGTTCCTA 59.676 38.462 0.00 0.00 41.97 2.94
241 245 5.129320 TGCATGACACTACATAGATGTTCCT 59.871 40.000 0.00 0.00 41.97 3.36
242 246 5.359756 TGCATGACACTACATAGATGTTCC 58.640 41.667 0.00 0.00 41.97 3.62
243 247 6.508563 CGTTGCATGACACTACATAGATGTTC 60.509 42.308 0.00 0.00 41.97 3.18
244 248 5.291858 CGTTGCATGACACTACATAGATGTT 59.708 40.000 0.00 0.00 41.97 2.71
245 249 4.805719 CGTTGCATGACACTACATAGATGT 59.194 41.667 0.00 0.08 44.48 3.06
246 250 5.043248 TCGTTGCATGACACTACATAGATG 58.957 41.667 0.00 0.00 0.00 2.90
247 251 5.262588 TCGTTGCATGACACTACATAGAT 57.737 39.130 0.00 0.00 0.00 1.98
248 252 4.712122 TCGTTGCATGACACTACATAGA 57.288 40.909 0.00 0.00 0.00 1.98
249 253 4.805719 ACATCGTTGCATGACACTACATAG 59.194 41.667 0.00 0.00 0.00 2.23
250 254 4.754322 ACATCGTTGCATGACACTACATA 58.246 39.130 0.00 0.00 0.00 2.29
251 255 3.599343 ACATCGTTGCATGACACTACAT 58.401 40.909 0.00 0.00 0.00 2.29
252 256 3.038788 ACATCGTTGCATGACACTACA 57.961 42.857 0.00 0.00 0.00 2.74
253 257 5.718649 AATACATCGTTGCATGACACTAC 57.281 39.130 0.00 0.00 0.00 2.73
254 258 8.432110 AATAAATACATCGTTGCATGACACTA 57.568 30.769 0.00 0.00 0.00 2.74
255 259 6.925610 ATAAATACATCGTTGCATGACACT 57.074 33.333 0.00 0.00 0.00 3.55
256 260 7.798516 CCTAATAAATACATCGTTGCATGACAC 59.201 37.037 0.00 0.00 0.00 3.67
257 261 7.497579 ACCTAATAAATACATCGTTGCATGACA 59.502 33.333 0.00 0.00 0.00 3.58
258 262 7.861630 ACCTAATAAATACATCGTTGCATGAC 58.138 34.615 0.00 0.00 0.00 3.06
259 263 8.445275 AACCTAATAAATACATCGTTGCATGA 57.555 30.769 0.00 0.00 0.00 3.07
285 289 7.497249 GCACACTCCAAGAAATAATGAGTCTAT 59.503 37.037 0.00 0.00 34.21 1.98
286 290 6.818644 GCACACTCCAAGAAATAATGAGTCTA 59.181 38.462 0.00 0.00 34.21 2.59
287 291 5.645497 GCACACTCCAAGAAATAATGAGTCT 59.355 40.000 0.00 0.00 34.21 3.24
288 292 5.446473 CGCACACTCCAAGAAATAATGAGTC 60.446 44.000 0.00 0.00 34.21 3.36
289 293 4.393062 CGCACACTCCAAGAAATAATGAGT 59.607 41.667 0.00 0.00 36.77 3.41
290 294 4.631377 TCGCACACTCCAAGAAATAATGAG 59.369 41.667 0.00 0.00 0.00 2.90
291 295 4.574892 TCGCACACTCCAAGAAATAATGA 58.425 39.130 0.00 0.00 0.00 2.57
292 296 4.944962 TCGCACACTCCAAGAAATAATG 57.055 40.909 0.00 0.00 0.00 1.90
293 297 4.943705 ACATCGCACACTCCAAGAAATAAT 59.056 37.500 0.00 0.00 0.00 1.28
294 298 4.323417 ACATCGCACACTCCAAGAAATAA 58.677 39.130 0.00 0.00 0.00 1.40
295 299 3.937814 ACATCGCACACTCCAAGAAATA 58.062 40.909 0.00 0.00 0.00 1.40
296 300 2.783135 ACATCGCACACTCCAAGAAAT 58.217 42.857 0.00 0.00 0.00 2.17
297 301 2.254546 ACATCGCACACTCCAAGAAA 57.745 45.000 0.00 0.00 0.00 2.52
298 302 2.143122 GAACATCGCACACTCCAAGAA 58.857 47.619 0.00 0.00 0.00 2.52
299 303 1.608025 GGAACATCGCACACTCCAAGA 60.608 52.381 0.00 0.00 0.00 3.02
300 304 0.798776 GGAACATCGCACACTCCAAG 59.201 55.000 0.00 0.00 0.00 3.61
301 305 0.948623 CGGAACATCGCACACTCCAA 60.949 55.000 0.00 0.00 0.00 3.53
302 306 1.374125 CGGAACATCGCACACTCCA 60.374 57.895 0.00 0.00 0.00 3.86
303 307 2.100631 CCGGAACATCGCACACTCC 61.101 63.158 0.00 0.00 0.00 3.85
304 308 0.108992 TACCGGAACATCGCACACTC 60.109 55.000 9.46 0.00 0.00 3.51
305 309 0.319083 TTACCGGAACATCGCACACT 59.681 50.000 9.46 0.00 0.00 3.55
306 310 0.441145 GTTACCGGAACATCGCACAC 59.559 55.000 9.46 0.00 38.02 3.82
307 311 0.319083 AGTTACCGGAACATCGCACA 59.681 50.000 9.46 0.00 40.86 4.57
308 312 1.435577 AAGTTACCGGAACATCGCAC 58.564 50.000 9.46 0.00 40.86 5.34
309 313 2.883574 CTAAGTTACCGGAACATCGCA 58.116 47.619 9.46 0.00 40.86 5.10
310 314 1.591619 GCTAAGTTACCGGAACATCGC 59.408 52.381 9.46 5.66 40.86 4.58
311 315 3.160777 AGCTAAGTTACCGGAACATCG 57.839 47.619 9.46 0.00 40.86 3.84
312 316 7.170489 GGTAATTAGCTAAGTTACCGGAACATC 59.830 40.741 25.44 12.15 40.86 3.06
313 317 6.988580 GGTAATTAGCTAAGTTACCGGAACAT 59.011 38.462 25.44 4.03 40.86 2.71
314 318 6.070881 TGGTAATTAGCTAAGTTACCGGAACA 60.071 38.462 28.98 19.48 46.55 3.18
315 319 6.256539 GTGGTAATTAGCTAAGTTACCGGAAC 59.743 42.308 28.98 23.55 46.55 3.62
316 320 6.070881 TGTGGTAATTAGCTAAGTTACCGGAA 60.071 38.462 28.98 21.73 46.55 4.30
317 321 5.421693 TGTGGTAATTAGCTAAGTTACCGGA 59.578 40.000 28.98 22.31 46.55 5.14
318 322 5.663456 TGTGGTAATTAGCTAAGTTACCGG 58.337 41.667 28.98 0.00 46.55 5.28
319 323 6.238022 GCTTGTGGTAATTAGCTAAGTTACCG 60.238 42.308 28.98 22.44 46.55 4.02
320 324 6.596497 TGCTTGTGGTAATTAGCTAAGTTACC 59.404 38.462 28.74 28.74 44.79 2.85
321 325 7.413767 GGTGCTTGTGGTAATTAGCTAAGTTAC 60.414 40.741 12.23 17.21 34.77 2.50
322 326 6.596497 GGTGCTTGTGGTAATTAGCTAAGTTA 59.404 38.462 12.23 7.79 34.77 2.24
323 327 5.414765 GGTGCTTGTGGTAATTAGCTAAGTT 59.585 40.000 12.23 8.70 34.77 2.66
324 328 4.941873 GGTGCTTGTGGTAATTAGCTAAGT 59.058 41.667 21.83 12.09 34.77 2.24
325 329 5.186198 AGGTGCTTGTGGTAATTAGCTAAG 58.814 41.667 12.54 17.61 34.77 2.18
326 330 5.045869 AGAGGTGCTTGTGGTAATTAGCTAA 60.046 40.000 8.99 8.99 34.77 3.09
327 331 4.469945 AGAGGTGCTTGTGGTAATTAGCTA 59.530 41.667 15.27 0.00 34.77 3.32
328 332 3.264450 AGAGGTGCTTGTGGTAATTAGCT 59.736 43.478 15.27 0.00 34.77 3.32
329 333 3.610911 AGAGGTGCTTGTGGTAATTAGC 58.389 45.455 7.74 7.74 0.00 3.09
330 334 5.091261 AGAGAGGTGCTTGTGGTAATTAG 57.909 43.478 0.00 0.00 0.00 1.73
331 335 4.777896 AGAGAGAGGTGCTTGTGGTAATTA 59.222 41.667 0.00 0.00 0.00 1.40
332 336 3.584848 AGAGAGAGGTGCTTGTGGTAATT 59.415 43.478 0.00 0.00 0.00 1.40
333 337 3.177228 AGAGAGAGGTGCTTGTGGTAAT 58.823 45.455 0.00 0.00 0.00 1.89
334 338 2.609747 AGAGAGAGGTGCTTGTGGTAA 58.390 47.619 0.00 0.00 0.00 2.85
335 339 2.310779 AGAGAGAGGTGCTTGTGGTA 57.689 50.000 0.00 0.00 0.00 3.25
336 340 1.346068 GAAGAGAGAGGTGCTTGTGGT 59.654 52.381 0.00 0.00 0.00 4.16
337 341 1.345741 TGAAGAGAGAGGTGCTTGTGG 59.654 52.381 0.00 0.00 0.00 4.17
338 342 2.827800 TGAAGAGAGAGGTGCTTGTG 57.172 50.000 0.00 0.00 0.00 3.33
339 343 5.489792 TTAATGAAGAGAGAGGTGCTTGT 57.510 39.130 0.00 0.00 0.00 3.16
340 344 6.998968 ATTTAATGAAGAGAGAGGTGCTTG 57.001 37.500 0.00 0.00 0.00 4.01
341 345 8.270744 ACATATTTAATGAAGAGAGAGGTGCTT 58.729 33.333 0.00 0.00 0.00 3.91
342 346 7.714377 CACATATTTAATGAAGAGAGAGGTGCT 59.286 37.037 0.00 0.00 0.00 4.40
343 347 7.519649 GCACATATTTAATGAAGAGAGAGGTGC 60.520 40.741 0.00 0.00 37.76 5.01
344 348 7.041508 GGCACATATTTAATGAAGAGAGAGGTG 60.042 40.741 0.00 0.00 0.00 4.00
345 349 6.995091 GGCACATATTTAATGAAGAGAGAGGT 59.005 38.462 0.00 0.00 0.00 3.85
346 350 6.994496 TGGCACATATTTAATGAAGAGAGAGG 59.006 38.462 0.00 0.00 0.00 3.69
347 351 7.496920 TGTGGCACATATTTAATGAAGAGAGAG 59.503 37.037 17.96 0.00 44.52 3.20
348 352 7.337938 TGTGGCACATATTTAATGAAGAGAGA 58.662 34.615 17.96 0.00 44.52 3.10
349 353 7.558161 TGTGGCACATATTTAATGAAGAGAG 57.442 36.000 17.96 0.00 44.52 3.20
350 354 9.625747 TTATGTGGCACATATTTAATGAAGAGA 57.374 29.630 33.89 16.11 44.52 3.10
351 355 9.888878 CTTATGTGGCACATATTTAATGAAGAG 57.111 33.333 33.89 22.09 44.52 2.85
352 356 8.352201 GCTTATGTGGCACATATTTAATGAAGA 58.648 33.333 33.89 17.83 44.52 2.87
353 357 8.136800 TGCTTATGTGGCACATATTTAATGAAG 58.863 33.333 33.89 27.40 44.52 3.02
354 358 8.005192 TGCTTATGTGGCACATATTTAATGAA 57.995 30.769 33.89 20.49 44.52 2.57
355 359 7.579761 TGCTTATGTGGCACATATTTAATGA 57.420 32.000 33.89 19.68 44.52 2.57
356 360 8.645730 TTTGCTTATGTGGCACATATTTAATG 57.354 30.769 33.89 20.34 44.52 1.90
357 361 8.477256 ACTTTGCTTATGTGGCACATATTTAAT 58.523 29.630 33.89 15.77 44.52 1.40
358 362 7.835822 ACTTTGCTTATGTGGCACATATTTAA 58.164 30.769 33.89 25.24 44.52 1.52
359 363 7.403312 ACTTTGCTTATGTGGCACATATTTA 57.597 32.000 33.89 21.55 44.52 1.40
360 364 6.284891 ACTTTGCTTATGTGGCACATATTT 57.715 33.333 33.89 17.52 44.52 1.40
361 365 5.920193 ACTTTGCTTATGTGGCACATATT 57.080 34.783 33.89 17.87 44.52 1.28
362 366 5.185635 ACAACTTTGCTTATGTGGCACATAT 59.814 36.000 33.89 18.57 44.52 1.78
363 367 4.522405 ACAACTTTGCTTATGTGGCACATA 59.478 37.500 31.06 31.06 44.52 2.29
364 368 3.321682 ACAACTTTGCTTATGTGGCACAT 59.678 39.130 33.18 33.18 44.52 3.21
365 369 2.692557 ACAACTTTGCTTATGTGGCACA 59.307 40.909 24.36 24.36 39.55 4.57
366 370 3.369546 ACAACTTTGCTTATGTGGCAC 57.630 42.857 11.55 11.55 39.55 5.01
367 371 5.468592 CAATACAACTTTGCTTATGTGGCA 58.531 37.500 0.00 0.00 37.97 4.92
368 372 4.864247 CCAATACAACTTTGCTTATGTGGC 59.136 41.667 0.00 0.00 0.00 5.01
369 373 6.071952 ACTCCAATACAACTTTGCTTATGTGG 60.072 38.462 0.00 0.00 0.00 4.17
370 374 6.803320 CACTCCAATACAACTTTGCTTATGTG 59.197 38.462 0.00 0.00 0.00 3.21
371 375 6.490040 ACACTCCAATACAACTTTGCTTATGT 59.510 34.615 0.00 0.00 0.00 2.29
372 376 6.803320 CACACTCCAATACAACTTTGCTTATG 59.197 38.462 0.00 0.00 0.00 1.90
373 377 6.490040 ACACACTCCAATACAACTTTGCTTAT 59.510 34.615 0.00 0.00 0.00 1.73
374 378 5.825679 ACACACTCCAATACAACTTTGCTTA 59.174 36.000 0.00 0.00 0.00 3.09
375 379 4.644685 ACACACTCCAATACAACTTTGCTT 59.355 37.500 0.00 0.00 0.00 3.91
376 380 4.036734 CACACACTCCAATACAACTTTGCT 59.963 41.667 0.00 0.00 0.00 3.91
377 381 4.036262 TCACACACTCCAATACAACTTTGC 59.964 41.667 0.00 0.00 0.00 3.68
378 382 5.749596 TCACACACTCCAATACAACTTTG 57.250 39.130 0.00 0.00 0.00 2.77
379 383 5.827797 ACATCACACACTCCAATACAACTTT 59.172 36.000 0.00 0.00 0.00 2.66
380 384 5.376625 ACATCACACACTCCAATACAACTT 58.623 37.500 0.00 0.00 0.00 2.66
381 385 4.973168 ACATCACACACTCCAATACAACT 58.027 39.130 0.00 0.00 0.00 3.16
382 386 5.689383 AACATCACACACTCCAATACAAC 57.311 39.130 0.00 0.00 0.00 3.32
383 387 6.530120 AGTAACATCACACACTCCAATACAA 58.470 36.000 0.00 0.00 0.00 2.41
384 388 6.109156 AGTAACATCACACACTCCAATACA 57.891 37.500 0.00 0.00 0.00 2.29
385 389 6.648725 GAGTAACATCACACACTCCAATAC 57.351 41.667 0.00 0.00 32.93 1.89
391 395 6.026947 ACTTAGGAGTAACATCACACACTC 57.973 41.667 0.00 0.00 37.32 3.51
392 396 6.420913 AACTTAGGAGTAACATCACACACT 57.579 37.500 0.00 0.00 34.21 3.55
393 397 5.638234 GGAACTTAGGAGTAACATCACACAC 59.362 44.000 0.00 0.00 34.21 3.82
394 398 5.542635 AGGAACTTAGGAGTAACATCACACA 59.457 40.000 0.00 0.00 34.21 3.72
395 399 6.038997 AGGAACTTAGGAGTAACATCACAC 57.961 41.667 0.00 0.00 34.21 3.82
396 400 5.187186 GGAGGAACTTAGGAGTAACATCACA 59.813 44.000 0.00 0.00 41.55 3.58
397 401 5.395435 GGGAGGAACTTAGGAGTAACATCAC 60.395 48.000 0.00 0.00 41.55 3.06
398 402 4.715297 GGGAGGAACTTAGGAGTAACATCA 59.285 45.833 0.00 0.00 41.55 3.07
399 403 4.101274 GGGGAGGAACTTAGGAGTAACATC 59.899 50.000 0.00 0.00 41.55 3.06
400 404 4.038633 GGGGAGGAACTTAGGAGTAACAT 58.961 47.826 0.00 0.00 41.55 2.71
401 405 3.181404 TGGGGAGGAACTTAGGAGTAACA 60.181 47.826 0.00 0.00 41.55 2.41
402 406 3.447950 TGGGGAGGAACTTAGGAGTAAC 58.552 50.000 0.00 0.00 41.55 2.50
403 407 3.858696 TGGGGAGGAACTTAGGAGTAA 57.141 47.619 0.00 0.00 41.55 2.24
404 408 4.037927 CAATGGGGAGGAACTTAGGAGTA 58.962 47.826 0.00 0.00 41.55 2.59
405 409 2.846827 CAATGGGGAGGAACTTAGGAGT 59.153 50.000 0.00 0.00 41.55 3.85
406 410 2.846827 ACAATGGGGAGGAACTTAGGAG 59.153 50.000 0.00 0.00 41.55 3.69
407 411 2.576191 CACAATGGGGAGGAACTTAGGA 59.424 50.000 0.00 0.00 41.55 2.94
408 412 2.576191 TCACAATGGGGAGGAACTTAGG 59.424 50.000 0.00 0.00 41.55 2.69
409 413 3.610911 GTCACAATGGGGAGGAACTTAG 58.389 50.000 0.00 0.00 41.55 2.18
410 414 2.307686 GGTCACAATGGGGAGGAACTTA 59.692 50.000 0.00 0.00 41.55 2.24
411 415 1.075536 GGTCACAATGGGGAGGAACTT 59.924 52.381 0.00 0.00 41.55 2.66
413 417 0.404040 TGGTCACAATGGGGAGGAAC 59.596 55.000 0.00 0.00 0.00 3.62
414 418 0.698238 CTGGTCACAATGGGGAGGAA 59.302 55.000 0.00 0.00 0.00 3.36
415 419 1.852157 GCTGGTCACAATGGGGAGGA 61.852 60.000 0.00 0.00 0.00 3.71
416 420 1.379044 GCTGGTCACAATGGGGAGG 60.379 63.158 0.00 0.00 0.00 4.30
417 421 1.379044 GGCTGGTCACAATGGGGAG 60.379 63.158 0.00 0.00 0.00 4.30
418 422 0.548926 TAGGCTGGTCACAATGGGGA 60.549 55.000 0.00 0.00 0.00 4.81
419 423 0.394352 GTAGGCTGGTCACAATGGGG 60.394 60.000 0.00 0.00 0.00 4.96
420 424 0.327924 TGTAGGCTGGTCACAATGGG 59.672 55.000 0.00 0.00 0.00 4.00
421 425 2.019249 CATGTAGGCTGGTCACAATGG 58.981 52.381 0.00 0.00 0.00 3.16
422 426 2.019249 CCATGTAGGCTGGTCACAATG 58.981 52.381 0.00 0.00 0.00 2.82
423 427 1.915489 TCCATGTAGGCTGGTCACAAT 59.085 47.619 0.00 0.00 37.29 2.71
424 428 1.357137 TCCATGTAGGCTGGTCACAA 58.643 50.000 0.00 0.00 37.29 3.33
425 429 1.278985 CTTCCATGTAGGCTGGTCACA 59.721 52.381 0.00 0.00 37.29 3.58
426 430 1.279271 ACTTCCATGTAGGCTGGTCAC 59.721 52.381 0.00 0.00 37.29 3.67
427 431 1.656587 ACTTCCATGTAGGCTGGTCA 58.343 50.000 0.00 0.00 37.29 4.02
428 432 3.388024 TCATACTTCCATGTAGGCTGGTC 59.612 47.826 0.00 0.00 37.29 4.02
429 433 3.384168 TCATACTTCCATGTAGGCTGGT 58.616 45.455 0.00 0.00 37.29 4.00
430 434 3.643320 TCTCATACTTCCATGTAGGCTGG 59.357 47.826 0.00 0.00 37.29 4.85
431 435 4.586421 TCTCTCATACTTCCATGTAGGCTG 59.414 45.833 0.00 0.00 37.29 4.85
432 436 4.809193 TCTCTCATACTTCCATGTAGGCT 58.191 43.478 0.00 0.00 37.29 4.58
433 437 5.736951 ATCTCTCATACTTCCATGTAGGC 57.263 43.478 0.00 0.00 37.29 3.93
434 438 6.623986 GCGTATCTCTCATACTTCCATGTAGG 60.624 46.154 0.00 0.00 39.47 3.18
435 439 6.072452 TGCGTATCTCTCATACTTCCATGTAG 60.072 42.308 0.00 0.00 0.00 2.74
436 440 5.768164 TGCGTATCTCTCATACTTCCATGTA 59.232 40.000 0.00 0.00 0.00 2.29
437 441 4.584743 TGCGTATCTCTCATACTTCCATGT 59.415 41.667 0.00 0.00 0.00 3.21
438 442 5.126396 TGCGTATCTCTCATACTTCCATG 57.874 43.478 0.00 0.00 0.00 3.66
439 443 5.991933 ATGCGTATCTCTCATACTTCCAT 57.008 39.130 0.00 0.00 0.00 3.41
440 444 6.095580 GGATATGCGTATCTCTCATACTTCCA 59.904 42.308 22.20 0.00 37.46 3.53
441 445 6.460399 GGGATATGCGTATCTCTCATACTTCC 60.460 46.154 22.20 9.53 35.34 3.46
442 446 6.095580 TGGGATATGCGTATCTCTCATACTTC 59.904 42.308 23.26 5.44 38.42 3.01
443 447 5.952347 TGGGATATGCGTATCTCTCATACTT 59.048 40.000 23.26 0.00 38.42 2.24
444 448 5.510430 TGGGATATGCGTATCTCTCATACT 58.490 41.667 23.26 0.00 38.42 2.12
445 449 5.836821 TGGGATATGCGTATCTCTCATAC 57.163 43.478 23.26 7.30 38.42 2.39
446 450 5.714806 TGTTGGGATATGCGTATCTCTCATA 59.285 40.000 23.26 8.61 38.42 2.15
447 451 4.528206 TGTTGGGATATGCGTATCTCTCAT 59.472 41.667 23.26 0.00 38.42 2.90
448 452 3.895041 TGTTGGGATATGCGTATCTCTCA 59.105 43.478 23.26 18.81 38.42 3.27
452 456 4.102524 TCCTTTGTTGGGATATGCGTATCT 59.897 41.667 22.20 0.00 37.46 1.98
457 461 4.654091 AAATCCTTTGTTGGGATATGCG 57.346 40.909 0.00 0.00 42.15 4.73
461 465 6.327626 TGAACCAAAAATCCTTTGTTGGGATA 59.672 34.615 11.36 0.00 44.01 2.59
481 485 4.184629 CACTGTGGCTAGTCTTATGAACC 58.815 47.826 0.00 0.00 0.00 3.62
490 494 1.848652 TACTCCCACTGTGGCTAGTC 58.151 55.000 26.56 0.00 35.79 2.59
492 496 2.180276 AGTTACTCCCACTGTGGCTAG 58.820 52.381 21.47 20.51 35.79 3.42
493 497 2.320681 AGTTACTCCCACTGTGGCTA 57.679 50.000 21.47 10.31 35.79 3.93
494 498 1.348036 GAAGTTACTCCCACTGTGGCT 59.652 52.381 21.47 8.83 35.79 4.75
495 499 1.071699 TGAAGTTACTCCCACTGTGGC 59.928 52.381 21.47 6.54 35.79 5.01
496 500 2.872038 GCTGAAGTTACTCCCACTGTGG 60.872 54.545 20.01 20.01 37.25 4.17
497 501 2.224281 TGCTGAAGTTACTCCCACTGTG 60.224 50.000 0.00 0.00 0.00 3.66
499 503 2.037772 ACTGCTGAAGTTACTCCCACTG 59.962 50.000 0.00 0.00 34.57 3.66
500 504 2.330216 ACTGCTGAAGTTACTCCCACT 58.670 47.619 0.00 0.00 34.57 4.00
501 505 2.841442 ACTGCTGAAGTTACTCCCAC 57.159 50.000 0.00 0.00 34.57 4.61
502 506 3.901844 AGTTACTGCTGAAGTTACTCCCA 59.098 43.478 1.61 0.00 43.59 4.37
503 507 4.538746 AGTTACTGCTGAAGTTACTCCC 57.461 45.455 1.61 0.00 43.59 4.30
504 508 5.539048 TGAAGTTACTGCTGAAGTTACTCC 58.461 41.667 7.84 0.00 45.68 3.85
505 509 6.702282 ACTTGAAGTTACTGCTGAAGTTACTC 59.298 38.462 7.84 3.50 45.68 2.59
507 511 6.073711 GGACTTGAAGTTACTGCTGAAGTTAC 60.074 42.308 0.00 0.00 40.56 2.50
508 512 5.989777 GGACTTGAAGTTACTGCTGAAGTTA 59.010 40.000 0.00 0.00 40.56 2.24
509 513 4.816925 GGACTTGAAGTTACTGCTGAAGTT 59.183 41.667 0.00 0.00 40.56 2.66
510 514 4.141711 TGGACTTGAAGTTACTGCTGAAGT 60.142 41.667 0.00 0.00 43.40 3.01
511 515 4.380531 TGGACTTGAAGTTACTGCTGAAG 58.619 43.478 0.00 0.00 0.00 3.02
512 516 4.415881 TGGACTTGAAGTTACTGCTGAA 57.584 40.909 0.00 0.00 0.00 3.02
513 517 4.127171 GTTGGACTTGAAGTTACTGCTGA 58.873 43.478 0.00 0.00 0.00 4.26
514 518 4.024556 CAGTTGGACTTGAAGTTACTGCTG 60.025 45.833 17.15 12.88 31.09 4.41
515 519 4.130118 CAGTTGGACTTGAAGTTACTGCT 58.870 43.478 17.15 7.28 31.09 4.24
516 520 4.127171 TCAGTTGGACTTGAAGTTACTGC 58.873 43.478 21.21 2.88 34.90 4.40
517 521 4.212214 GCTCAGTTGGACTTGAAGTTACTG 59.788 45.833 20.52 20.52 35.56 2.74
518 522 4.141711 TGCTCAGTTGGACTTGAAGTTACT 60.142 41.667 0.00 1.27 0.00 2.24
519 523 4.127171 TGCTCAGTTGGACTTGAAGTTAC 58.873 43.478 0.00 0.00 0.00 2.50
520 524 4.415881 TGCTCAGTTGGACTTGAAGTTA 57.584 40.909 0.00 0.00 0.00 2.24
521 525 3.281727 TGCTCAGTTGGACTTGAAGTT 57.718 42.857 0.00 0.00 0.00 2.66
522 526 3.281727 TTGCTCAGTTGGACTTGAAGT 57.718 42.857 0.00 0.00 0.00 3.01
523 527 4.843220 ATTTGCTCAGTTGGACTTGAAG 57.157 40.909 0.00 0.00 0.00 3.02
524 528 5.105392 ACAAATTTGCTCAGTTGGACTTGAA 60.105 36.000 18.12 0.00 0.00 2.69
525 529 4.402155 ACAAATTTGCTCAGTTGGACTTGA 59.598 37.500 18.12 0.00 0.00 3.02
526 530 4.685924 ACAAATTTGCTCAGTTGGACTTG 58.314 39.130 18.12 0.00 0.00 3.16
527 531 4.646492 AGACAAATTTGCTCAGTTGGACTT 59.354 37.500 18.12 0.00 0.00 3.01
528 532 4.210331 AGACAAATTTGCTCAGTTGGACT 58.790 39.130 18.12 0.00 0.00 3.85
529 533 4.574599 AGACAAATTTGCTCAGTTGGAC 57.425 40.909 18.12 0.00 0.00 4.02
530 534 5.769662 ACATAGACAAATTTGCTCAGTTGGA 59.230 36.000 18.12 0.79 0.00 3.53
531 535 5.860182 CACATAGACAAATTTGCTCAGTTGG 59.140 40.000 18.12 3.57 0.00 3.77
532 536 5.860182 CCACATAGACAAATTTGCTCAGTTG 59.140 40.000 18.12 10.57 0.00 3.16
533 537 5.565439 GCCACATAGACAAATTTGCTCAGTT 60.565 40.000 18.12 0.00 0.00 3.16
534 538 4.082571 GCCACATAGACAAATTTGCTCAGT 60.083 41.667 18.12 13.51 0.00 3.41
535 539 4.082625 TGCCACATAGACAAATTTGCTCAG 60.083 41.667 18.12 13.00 0.00 3.35
536 540 3.825585 TGCCACATAGACAAATTTGCTCA 59.174 39.130 18.12 3.52 0.00 4.26
537 541 4.439305 TGCCACATAGACAAATTTGCTC 57.561 40.909 18.12 13.81 0.00 4.26
538 542 4.870123 TTGCCACATAGACAAATTTGCT 57.130 36.364 18.12 16.84 0.00 3.91
539 543 5.170021 TCATTGCCACATAGACAAATTTGC 58.830 37.500 18.12 10.76 0.00 3.68
540 544 6.392354 ACTCATTGCCACATAGACAAATTTG 58.608 36.000 16.67 16.67 0.00 2.32
541 545 6.594788 ACTCATTGCCACATAGACAAATTT 57.405 33.333 0.00 0.00 0.00 1.82
542 546 6.594788 AACTCATTGCCACATAGACAAATT 57.405 33.333 0.00 0.00 0.00 1.82
543 547 7.701539 TTAACTCATTGCCACATAGACAAAT 57.298 32.000 0.00 0.00 0.00 2.32
544 548 7.362834 CCATTAACTCATTGCCACATAGACAAA 60.363 37.037 0.00 0.00 0.00 2.83
545 549 6.095300 CCATTAACTCATTGCCACATAGACAA 59.905 38.462 0.00 0.00 0.00 3.18
546 550 5.589855 CCATTAACTCATTGCCACATAGACA 59.410 40.000 0.00 0.00 0.00 3.41
547 551 5.822519 TCCATTAACTCATTGCCACATAGAC 59.177 40.000 0.00 0.00 0.00 2.59
548 552 6.000246 TCCATTAACTCATTGCCACATAGA 58.000 37.500 0.00 0.00 0.00 1.98
549 553 6.057533 TCTCCATTAACTCATTGCCACATAG 58.942 40.000 0.00 0.00 0.00 2.23
550 554 6.000246 TCTCCATTAACTCATTGCCACATA 58.000 37.500 0.00 0.00 0.00 2.29
551 555 4.858850 TCTCCATTAACTCATTGCCACAT 58.141 39.130 0.00 0.00 0.00 3.21
552 556 4.019411 TCTCTCCATTAACTCATTGCCACA 60.019 41.667 0.00 0.00 0.00 4.17
553 557 4.517285 TCTCTCCATTAACTCATTGCCAC 58.483 43.478 0.00 0.00 0.00 5.01
554 558 4.471025 TCTCTCTCCATTAACTCATTGCCA 59.529 41.667 0.00 0.00 0.00 4.92
555 559 5.028549 TCTCTCTCCATTAACTCATTGCC 57.971 43.478 0.00 0.00 0.00 4.52
556 560 5.055812 CCTCTCTCTCCATTAACTCATTGC 58.944 45.833 0.00 0.00 0.00 3.56
557 561 6.232581 ACCTCTCTCTCCATTAACTCATTG 57.767 41.667 0.00 0.00 0.00 2.82
558 562 7.129425 ACTACCTCTCTCTCCATTAACTCATT 58.871 38.462 0.00 0.00 0.00 2.57
559 563 6.678547 ACTACCTCTCTCTCCATTAACTCAT 58.321 40.000 0.00 0.00 0.00 2.90
560 564 6.080969 ACTACCTCTCTCTCCATTAACTCA 57.919 41.667 0.00 0.00 0.00 3.41
561 565 6.831868 AGAACTACCTCTCTCTCCATTAACTC 59.168 42.308 0.00 0.00 0.00 3.01
562 566 6.737608 AGAACTACCTCTCTCTCCATTAACT 58.262 40.000 0.00 0.00 0.00 2.24
563 567 7.776500 ACTAGAACTACCTCTCTCTCCATTAAC 59.224 40.741 0.00 0.00 0.00 2.01
564 568 7.874252 ACTAGAACTACCTCTCTCTCCATTAA 58.126 38.462 0.00 0.00 0.00 1.40
565 569 7.454553 ACTAGAACTACCTCTCTCTCCATTA 57.545 40.000 0.00 0.00 0.00 1.90
566 570 6.335781 ACTAGAACTACCTCTCTCTCCATT 57.664 41.667 0.00 0.00 0.00 3.16
567 571 5.987019 ACTAGAACTACCTCTCTCTCCAT 57.013 43.478 0.00 0.00 0.00 3.41
568 572 6.444493 AGTTACTAGAACTACCTCTCTCTCCA 59.556 42.308 0.00 0.00 0.00 3.86
569 573 6.892485 AGTTACTAGAACTACCTCTCTCTCC 58.108 44.000 0.00 0.00 0.00 3.71
570 574 9.538508 CTAAGTTACTAGAACTACCTCTCTCTC 57.461 40.741 0.00 0.00 0.00 3.20
571 575 7.989170 GCTAAGTTACTAGAACTACCTCTCTCT 59.011 40.741 0.00 0.00 0.00 3.10
572 576 7.989170 AGCTAAGTTACTAGAACTACCTCTCTC 59.011 40.741 0.00 0.00 0.00 3.20
573 577 7.864770 AGCTAAGTTACTAGAACTACCTCTCT 58.135 38.462 0.00 0.00 0.00 3.10
574 578 9.264719 CTAGCTAAGTTACTAGAACTACCTCTC 57.735 40.741 0.00 0.00 38.53 3.20
575 579 8.771286 ACTAGCTAAGTTACTAGAACTACCTCT 58.229 37.037 18.49 1.85 38.53 3.69
576 580 8.962884 ACTAGCTAAGTTACTAGAACTACCTC 57.037 38.462 18.49 0.00 38.53 3.85
591 595 8.027771 GTGTGATGTTACAGTAACTAGCTAAGT 58.972 37.037 21.56 0.00 41.49 2.24
593 597 7.888424 TGTGTGATGTTACAGTAACTAGCTAA 58.112 34.615 21.56 3.59 39.38 3.09
602 606 6.761242 GCCTTGATATGTGTGATGTTACAGTA 59.239 38.462 0.00 0.00 0.00 2.74
603 607 5.586243 GCCTTGATATGTGTGATGTTACAGT 59.414 40.000 0.00 0.00 0.00 3.55
605 609 5.495640 TGCCTTGATATGTGTGATGTTACA 58.504 37.500 0.00 0.00 0.00 2.41
606 610 6.316140 TCTTGCCTTGATATGTGTGATGTTAC 59.684 38.462 0.00 0.00 0.00 2.50
607 611 6.413892 TCTTGCCTTGATATGTGTGATGTTA 58.586 36.000 0.00 0.00 0.00 2.41
608 612 5.255687 TCTTGCCTTGATATGTGTGATGTT 58.744 37.500 0.00 0.00 0.00 2.71
610 614 5.529800 TCATCTTGCCTTGATATGTGTGATG 59.470 40.000 0.00 0.00 0.00 3.07
611 615 5.687780 TCATCTTGCCTTGATATGTGTGAT 58.312 37.500 0.00 0.00 0.00 3.06
612 616 5.101648 TCATCTTGCCTTGATATGTGTGA 57.898 39.130 0.00 0.00 0.00 3.58
615 619 5.366460 AGACTCATCTTGCCTTGATATGTG 58.634 41.667 0.00 0.00 0.00 3.21
616 620 5.627182 AGACTCATCTTGCCTTGATATGT 57.373 39.130 0.00 0.00 0.00 2.29
617 621 7.492020 GCTATAGACTCATCTTGCCTTGATATG 59.508 40.741 3.21 0.00 36.29 1.78
619 623 6.494835 TGCTATAGACTCATCTTGCCTTGATA 59.505 38.462 3.21 0.00 36.29 2.15
621 625 4.651045 TGCTATAGACTCATCTTGCCTTGA 59.349 41.667 3.21 0.00 36.29 3.02
622 626 4.953667 TGCTATAGACTCATCTTGCCTTG 58.046 43.478 3.21 0.00 36.29 3.61
624 628 6.924913 TTATGCTATAGACTCATCTTGCCT 57.075 37.500 3.21 0.00 36.29 4.75
625 629 9.658799 TTTATTATGCTATAGACTCATCTTGCC 57.341 33.333 3.21 0.00 36.29 4.52
665 717 7.338449 AGTGGGAAATAACATATGTGTGGTAAC 59.662 37.037 9.63 2.39 38.92 2.50
666 718 7.406916 AGTGGGAAATAACATATGTGTGGTAA 58.593 34.615 9.63 0.00 38.92 2.85
668 720 5.826643 AGTGGGAAATAACATATGTGTGGT 58.173 37.500 9.63 0.00 38.92 4.16
669 721 9.219603 CTATAGTGGGAAATAACATATGTGTGG 57.780 37.037 9.63 0.00 38.92 4.17
672 724 9.658799 CCTCTATAGTGGGAAATAACATATGTG 57.341 37.037 9.63 0.00 0.00 3.21
673 725 9.393786 ACCTCTATAGTGGGAAATAACATATGT 57.606 33.333 21.82 1.41 33.22 2.29
680 765 9.940974 TGTTACTACCTCTATAGTGGGAAATAA 57.059 33.333 21.82 13.14 36.09 1.40
683 768 9.584008 CTATGTTACTACCTCTATAGTGGGAAA 57.416 37.037 21.82 6.05 36.09 3.13
685 770 8.515927 TCTATGTTACTACCTCTATAGTGGGA 57.484 38.462 21.82 14.49 36.09 4.37
686 771 8.384718 ACTCTATGTTACTACCTCTATAGTGGG 58.615 40.741 21.82 16.23 36.09 4.61
693 778 9.973450 CGTTACTACTCTATGTTACTACCTCTA 57.027 37.037 0.00 0.00 0.00 2.43
694 779 8.482128 ACGTTACTACTCTATGTTACTACCTCT 58.518 37.037 0.00 0.00 0.00 3.69
704 789 3.359033 TGGGCACGTTACTACTCTATGT 58.641 45.455 0.00 0.00 0.00 2.29
709 794 6.081872 AGTAATATGGGCACGTTACTACTC 57.918 41.667 8.85 0.00 36.06 2.59
717 802 5.773680 ACATAGAGTAGTAATATGGGCACGT 59.226 40.000 7.03 0.00 32.36 4.49
719 804 8.804204 AGTAACATAGAGTAGTAATATGGGCAC 58.196 37.037 7.03 0.00 32.36 5.01
754 839 9.595823 GTTTGGCTACATTTATTAGACTAGTCA 57.404 33.333 24.44 5.48 0.00 3.41
755 840 9.043079 GGTTTGGCTACATTTATTAGACTAGTC 57.957 37.037 15.41 15.41 0.00 2.59
758 843 8.097791 AGGGTTTGGCTACATTTATTAGACTA 57.902 34.615 0.00 0.00 0.00 2.59
761 846 6.159751 AGGAGGGTTTGGCTACATTTATTAGA 59.840 38.462 0.00 0.00 0.00 2.10
766 851 3.850173 AGAGGAGGGTTTGGCTACATTTA 59.150 43.478 0.00 0.00 0.00 1.40
767 852 2.649816 AGAGGAGGGTTTGGCTACATTT 59.350 45.455 0.00 0.00 0.00 2.32
768 853 2.279173 AGAGGAGGGTTTGGCTACATT 58.721 47.619 0.00 0.00 0.00 2.71
834 1070 5.929058 TTGGCTGCATTTATTATGAACCA 57.071 34.783 0.50 0.00 0.00 3.67
838 1074 4.961730 AGGGTTTGGCTGCATTTATTATGA 59.038 37.500 0.50 0.00 0.00 2.15
858 1094 3.866651 CACACTTCCATGTAGAGAAGGG 58.133 50.000 9.39 9.39 46.79 3.95
862 1098 3.306989 CCTTGCACACTTCCATGTAGAGA 60.307 47.826 0.00 0.00 0.00 3.10
928 1190 2.978156 ATTGGAGGAGAGTTTGGCAA 57.022 45.000 0.00 0.00 0.00 4.52
1054 1593 1.748403 GCGGTGAGCTCCATGGATA 59.252 57.895 16.63 0.00 44.04 2.59
1318 1863 2.282816 CATGGCCCGTCCCAACAA 60.283 61.111 0.00 0.00 38.61 2.83
1422 1967 4.796495 GTGGAAGGGCGGCGGATT 62.796 66.667 9.78 0.00 0.00 3.01
1445 1990 2.180204 GCGGAATGACGGGGACATG 61.180 63.158 0.00 0.00 0.00 3.21
1451 1996 4.096003 AGGTGGCGGAATGACGGG 62.096 66.667 0.00 0.00 0.00 5.28
1549 2094 4.705519 GCACGCCGCTTGCATGTT 62.706 61.111 16.39 0.00 41.33 2.71
1655 2212 3.226429 GAGCACTCCGTGGCTGACA 62.226 63.158 0.00 0.00 41.22 3.58
1769 2326 4.409218 CGTTTCGCCGACCCGAGA 62.409 66.667 0.00 0.00 38.60 4.04
1929 2486 2.429930 CCTGAACACCTCCGCCAA 59.570 61.111 0.00 0.00 0.00 4.52
2135 2701 4.555709 ACCGTGGGCAACTGCGAA 62.556 61.111 0.00 0.00 43.26 4.70
2232 2804 1.892819 ATGTCCAGGCTCGGTGACAG 61.893 60.000 10.29 0.00 40.70 3.51
2245 2817 0.469494 CCCGATGATGGTGATGTCCA 59.531 55.000 0.00 0.00 42.01 4.02
2711 3318 4.041691 GGAGCCCCTATACTGCTATTTTGA 59.958 45.833 0.00 0.00 34.99 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.