Multiple sequence alignment - TraesCS7B01G409300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G409300 chr7B 100.000 4889 0 0 1 4889 678639288 678634400 0.000000e+00 9029.0
1 TraesCS7B01G409300 chr7B 80.435 138 17 7 48 180 45442733 45442601 4.030000e-16 97.1
2 TraesCS7B01G409300 chr7D 93.757 2723 140 11 1 2715 599186866 599184166 0.000000e+00 4060.0
3 TraesCS7B01G409300 chr7D 90.323 558 40 4 2708 3251 599184117 599183560 0.000000e+00 719.0
4 TraesCS7B01G409300 chr7D 79.598 696 75 29 3794 4468 599182796 599182147 2.090000e-118 436.0
5 TraesCS7B01G409300 chr7D 90.208 337 27 3 3049 3381 599183494 599183160 7.520000e-118 435.0
6 TraesCS7B01G409300 chr7D 93.130 262 14 3 3498 3759 599183058 599182801 9.930000e-102 381.0
7 TraesCS7B01G409300 chr7D 90.821 207 15 1 3049 3251 599183698 599183492 1.730000e-69 274.0
8 TraesCS7B01G409300 chr7D 90.338 207 16 1 3049 3251 599183562 599183356 8.070000e-68 268.0
9 TraesCS7B01G409300 chr7D 80.189 318 41 14 4185 4486 579907718 579908029 8.240000e-53 219.0
10 TraesCS7B01G409300 chr7D 89.286 84 9 0 3374 3457 188264124 188264041 6.690000e-19 106.0
11 TraesCS7B01G409300 chr7D 98.113 53 1 0 4634 4686 599179297 599179245 5.210000e-15 93.5
12 TraesCS7B01G409300 chr7D 83.962 106 8 6 44 145 614483399 614483299 5.210000e-15 93.5
13 TraesCS7B01G409300 chr7D 95.745 47 2 0 1963 2009 599185014 599184968 5.250000e-10 76.8
14 TraesCS7B01G409300 chr7D 95.652 46 2 0 3456 3501 599183142 599183097 1.890000e-09 75.0
15 TraesCS7B01G409300 chr7D 100.000 37 0 0 4465 4501 599179535 599179499 8.780000e-08 69.4
16 TraesCS7B01G409300 chr5D 93.035 2728 132 13 1 2710 445804724 445807411 0.000000e+00 3932.0
17 TraesCS7B01G409300 chr5D 90.143 558 41 4 2708 3251 445807465 445808022 0.000000e+00 713.0
18 TraesCS7B01G409300 chr5D 91.239 331 23 3 3049 3375 445808549 445808877 3.470000e-121 446.0
19 TraesCS7B01G409300 chr5D 93.511 262 13 3 3498 3759 445808988 445809245 2.130000e-103 387.0
20 TraesCS7B01G409300 chr5D 91.304 207 14 1 3049 3251 445808413 445808619 3.730000e-71 279.0
21 TraesCS7B01G409300 chr5D 90.821 207 15 1 3049 3251 445808481 445808687 1.730000e-69 274.0
22 TraesCS7B01G409300 chr5D 79.419 413 46 25 4084 4468 445809483 445809884 6.280000e-64 255.0
23 TraesCS7B01G409300 chr5D 98.113 53 1 0 4634 4686 445812825 445812877 5.210000e-15 93.5
24 TraesCS7B01G409300 chr5D 95.652 46 2 0 3456 3501 445808904 445808949 1.890000e-09 75.0
25 TraesCS7B01G409300 chr5D 100.000 37 0 0 4465 4501 445812587 445812623 8.780000e-08 69.4
26 TraesCS7B01G409300 chr7A 91.988 2721 118 27 2 2715 691440481 691437854 0.000000e+00 3725.0
27 TraesCS7B01G409300 chr7A 90.497 684 42 6 2708 3375 691437804 691437128 0.000000e+00 881.0
28 TraesCS7B01G409300 chr7A 93.893 262 13 2 3498 3759 691436990 691436732 4.590000e-105 392.0
29 TraesCS7B01G409300 chr7A 89.756 205 14 4 4465 4663 691432841 691432638 6.280000e-64 255.0
30 TraesCS7B01G409300 chr7A 79.063 363 53 16 4084 4433 691436479 691436127 1.370000e-55 228.0
31 TraesCS7B01G409300 chr7A 94.845 97 5 0 1913 2009 691438680 691438584 8.480000e-33 152.0
32 TraesCS7B01G409300 chr7A 87.288 118 8 5 4459 4574 691436132 691436020 1.430000e-25 128.0
33 TraesCS7B01G409300 chr7A 81.633 147 15 6 2062 2208 691438315 691438181 1.440000e-20 111.0
34 TraesCS7B01G409300 chr7A 98.113 53 1 0 4634 4686 691432637 691432585 5.210000e-15 93.5
35 TraesCS7B01G409300 chr7A 73.563 348 49 30 4177 4486 691437820 691437478 5.210000e-15 93.5
36 TraesCS7B01G409300 chr7A 97.917 48 1 0 1961 2008 691438680 691438633 3.140000e-12 84.2
37 TraesCS7B01G409300 chr7A 100.000 32 0 0 4406 4437 691436016 691435985 5.280000e-05 60.2
38 TraesCS7B01G409300 chr7A 100.000 30 0 0 3456 3485 691437101 691437072 6.840000e-04 56.5
39 TraesCS7B01G409300 chr4B 91.518 672 31 10 998 1660 12867536 12868190 0.000000e+00 902.0
40 TraesCS7B01G409300 chr4B 94.634 205 8 2 4687 4889 545440586 545440789 1.020000e-81 315.0
41 TraesCS7B01G409300 chr4B 82.051 390 34 21 319 698 12865392 12865755 2.860000e-77 300.0
42 TraesCS7B01G409300 chr4B 82.051 390 34 21 319 698 12876952 12877315 2.860000e-77 300.0
43 TraesCS7B01G409300 chr4B 86.580 231 15 7 739 963 12867318 12867538 1.760000e-59 241.0
44 TraesCS7B01G409300 chr2B 94.146 205 8 3 4687 4889 725214306 725214508 4.750000e-80 309.0
45 TraesCS7B01G409300 chr4D 89.268 205 15 4 4465 4663 485779074 485779277 2.920000e-62 250.0
46 TraesCS7B01G409300 chr4D 98.113 53 1 0 4634 4686 485779278 485779330 5.210000e-15 93.5
47 TraesCS7B01G409300 chr6A 87.379 206 22 3 4688 4889 55541788 55541583 2.940000e-57 233.0
48 TraesCS7B01G409300 chr6A 93.976 83 4 1 3374 3455 610797874 610797956 1.850000e-24 124.0
49 TraesCS7B01G409300 chr5B 91.111 90 6 2 3376 3465 699995979 699996066 2.390000e-23 121.0
50 TraesCS7B01G409300 chr3D 76.419 229 49 4 44 268 598342888 598342661 8.600000e-23 119.0
51 TraesCS7B01G409300 chr3D 84.404 109 8 6 41 145 2938473 2938576 1.120000e-16 99.0
52 TraesCS7B01G409300 chr6B 91.566 83 7 0 3374 3456 602844876 602844794 1.110000e-21 115.0
53 TraesCS7B01G409300 chr6B 85.057 87 11 2 3373 3459 572488234 572488150 2.420000e-13 87.9
54 TraesCS7B01G409300 chr3A 78.392 199 25 8 4704 4886 272794447 272794643 4.000000e-21 113.0
55 TraesCS7B01G409300 chr3A 80.576 139 25 2 44 180 474206757 474206619 6.690000e-19 106.0
56 TraesCS7B01G409300 chr4A 84.348 115 12 5 44 153 79048708 79048595 1.860000e-19 108.0
57 TraesCS7B01G409300 chr1D 87.273 55 7 0 3383 3437 411518164 411518218 4.090000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G409300 chr7B 678634400 678639288 4888 True 9029.000000 9029 100.000000 1 4889 1 chr7B.!!$R2 4888
1 TraesCS7B01G409300 chr7D 599179245 599186866 7621 True 626.154545 4060 92.516818 1 4686 11 chr7D.!!$R3 4685
2 TraesCS7B01G409300 chr5D 445804724 445812877 8153 False 652.390000 3932 92.323700 1 4686 10 chr5D.!!$F1 4685
3 TraesCS7B01G409300 chr7A 691432585 691440481 7896 True 481.530769 3725 90.658154 2 4686 13 chr7A.!!$R1 4684
4 TraesCS7B01G409300 chr4B 12865392 12868190 2798 False 481.000000 902 86.716333 319 1660 3 chr4B.!!$F3 1341

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
713 1728 0.455295 GAGACGTGAGAGACCGCAAG 60.455 60.0 0.00 0.0 0.0 4.01 F
1895 3510 0.040958 GCAGCAGGTGTTCAAGTTCG 60.041 55.0 0.66 0.0 0.0 3.95 F
1931 3546 0.543749 GGGGATGAAGCTGCAGTAGT 59.456 55.0 16.64 0.0 0.0 2.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1995 3610 0.405198 TCTGCACCACCATGGATTGT 59.595 50.0 21.47 9.28 40.96 2.71 R
3746 6239 0.179034 GGAGCCTACCTGCAAGATGG 60.179 60.0 0.00 0.00 34.07 3.51 R
3892 6385 0.826715 GAGCTCATCCCTGTAGTGCA 59.173 55.0 9.40 0.00 0.00 4.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
172 173 1.005512 CCGTCATCGTGGAACCACA 60.006 57.895 21.41 10.62 46.47 4.17
173 174 0.601576 CCGTCATCGTGGAACCACAA 60.602 55.000 21.41 5.94 46.47 3.33
174 175 1.222300 CGTCATCGTGGAACCACAAA 58.778 50.000 21.41 10.76 46.47 2.83
248 250 1.150536 ACCACGCCAAGTTGTCCAT 59.849 52.632 1.45 0.00 0.00 3.41
289 293 1.887707 GGATCGGCCATTGACGACC 60.888 63.158 2.24 0.00 42.39 4.79
322 326 0.798776 CGCCCGCCATCAGATAATTC 59.201 55.000 0.00 0.00 0.00 2.17
328 332 5.335191 GCCCGCCATCAGATAATTCTAAAAG 60.335 44.000 0.00 0.00 0.00 2.27
543 554 5.627367 TGAAACGTTGTTGAAAGTGTTTGAG 59.373 36.000 0.00 0.00 30.40 3.02
564 575 6.705302 TGAGATATGACTGGGATAATTGCTC 58.295 40.000 0.00 0.00 0.00 4.26
709 1724 0.961358 AAGGGAGACGTGAGAGACCG 60.961 60.000 0.00 0.00 0.00 4.79
710 1725 2.486042 GGAGACGTGAGAGACCGC 59.514 66.667 0.00 0.00 0.00 5.68
711 1726 2.333417 GGAGACGTGAGAGACCGCA 61.333 63.158 0.00 0.00 0.00 5.69
712 1727 1.579932 GAGACGTGAGAGACCGCAA 59.420 57.895 0.00 0.00 0.00 4.85
713 1728 0.455295 GAGACGTGAGAGACCGCAAG 60.455 60.000 0.00 0.00 0.00 4.01
714 1729 1.173444 AGACGTGAGAGACCGCAAGT 61.173 55.000 0.00 0.00 37.48 3.16
715 1730 0.729816 GACGTGAGAGACCGCAAGTC 60.730 60.000 0.00 0.00 46.71 3.01
722 1737 4.403976 GACCGCAAGTCTCCGATC 57.596 61.111 0.00 0.00 42.69 3.69
723 1738 1.511305 GACCGCAAGTCTCCGATCA 59.489 57.895 0.00 0.00 42.69 2.92
724 1739 0.802607 GACCGCAAGTCTCCGATCAC 60.803 60.000 0.00 0.00 42.69 3.06
725 1740 1.874019 CCGCAAGTCTCCGATCACG 60.874 63.158 0.00 0.00 39.43 4.35
726 1741 1.136774 CGCAAGTCTCCGATCACGA 59.863 57.895 0.00 0.00 42.66 4.35
731 1746 2.414994 AGTCTCCGATCACGACCTTA 57.585 50.000 0.00 0.00 42.66 2.69
980 2569 1.281656 CCAACACCGCCGAAAGAAC 59.718 57.895 0.00 0.00 0.00 3.01
988 2577 0.806492 CGCCGAAAGAACCCTAGAGC 60.806 60.000 0.00 0.00 0.00 4.09
1041 2648 4.475135 GAGAAGAGCCCCACCGCC 62.475 72.222 0.00 0.00 0.00 6.13
1052 2659 4.394712 CACCGCCGAGAAAGCCCT 62.395 66.667 0.00 0.00 0.00 5.19
1053 2660 2.682494 ACCGCCGAGAAAGCCCTA 60.682 61.111 0.00 0.00 0.00 3.53
1054 2661 2.107141 CCGCCGAGAAAGCCCTAG 59.893 66.667 0.00 0.00 0.00 3.02
1055 2662 2.423898 CCGCCGAGAAAGCCCTAGA 61.424 63.158 0.00 0.00 0.00 2.43
1056 2663 1.066587 CGCCGAGAAAGCCCTAGAG 59.933 63.158 0.00 0.00 0.00 2.43
1057 2664 1.443828 GCCGAGAAAGCCCTAGAGG 59.556 63.158 0.00 0.00 39.47 3.69
1482 3089 1.700042 GGATCCTCCCGCAGTTCCAT 61.700 60.000 3.84 0.00 0.00 3.41
1663 3278 3.204526 CATCTCCTGAGACTCATTTGGC 58.795 50.000 5.42 0.00 40.75 4.52
1697 3312 1.670791 GTGTTCGGGTTGAAGGACAA 58.329 50.000 0.00 0.00 37.23 3.18
1737 3352 3.128242 GGGTGCATCTTGACAGAATCTTG 59.872 47.826 0.00 0.00 30.76 3.02
1761 3376 1.002142 CAGGTAGTCGACAACGTGACA 60.002 52.381 19.50 0.00 40.69 3.58
1791 3406 2.268298 CGGTTGGAGTTTATGAGACCG 58.732 52.381 0.00 0.00 41.89 4.79
1895 3510 0.040958 GCAGCAGGTGTTCAAGTTCG 60.041 55.000 0.66 0.00 0.00 3.95
1906 3521 3.248363 TGTTCAAGTTCGACAGCAATCTG 59.752 43.478 0.00 0.00 45.71 2.90
1928 3543 2.233566 TGGGGGATGAAGCTGCAGT 61.234 57.895 16.64 0.00 0.00 4.40
1931 3546 0.543749 GGGGATGAAGCTGCAGTAGT 59.456 55.000 16.64 0.00 0.00 2.73
1951 3566 4.485163 AGTTGTTCAAGTTCAACAGCAAC 58.515 39.130 9.01 0.00 44.08 4.17
1954 3569 1.021202 TCAAGTTCAACAGCAACCCG 58.979 50.000 0.00 0.00 0.00 5.28
1995 3610 4.484236 CAGCAGTTGTTCAAGTTCAACAA 58.516 39.130 0.37 0.37 44.08 2.83
2163 3778 1.702182 TTCAGCAGGGCAATCAACAA 58.298 45.000 0.00 0.00 0.00 2.83
2249 3864 2.671070 CGTGGGCAAGAGGGACAT 59.329 61.111 0.00 0.00 0.00 3.06
2450 4065 6.426025 GGAATAAAGAGTGAGGTTAAACGTGT 59.574 38.462 0.00 0.00 0.00 4.49
2511 4126 4.340381 GCAGAGATGTTTATCCAGGCAATT 59.660 41.667 0.00 0.00 33.64 2.32
2532 4147 1.617322 AGGTGCTGAACGAGACACTA 58.383 50.000 0.00 0.00 32.44 2.74
2631 4248 5.662456 GTGGAGGTCACTAAATAGGAGAAC 58.338 45.833 0.00 0.00 42.86 3.01
2673 4290 2.626785 TCCTGGTGGGATCAGTAACAA 58.373 47.619 0.00 0.00 39.58 2.83
2754 4428 6.723052 AGAACTGGAATCATTGGTTCATCTTT 59.277 34.615 11.61 0.00 38.78 2.52
2801 4475 5.755861 GGAGCCAGAGTACTTCATATGAAAC 59.244 44.000 18.47 14.41 33.07 2.78
2893 4568 6.043012 CCAGGTCTGATCCTTATCTTGATTCT 59.957 42.308 0.00 0.00 35.37 2.40
2953 4628 5.052481 TCGGATGATGCTTATGTCTTGAAG 58.948 41.667 0.00 0.00 0.00 3.02
2957 4632 5.164620 TGATGCTTATGTCTTGAAGACCA 57.835 39.130 21.45 12.38 44.44 4.02
2959 4634 5.819379 TGATGCTTATGTCTTGAAGACCATC 59.181 40.000 23.07 23.07 44.44 3.51
2966 4641 8.948631 TTATGTCTTGAAGACCATCTGATTAC 57.051 34.615 21.45 0.00 44.44 1.89
3012 4693 8.383374 TGCTATTTTAGTTTTCCTACTCCCTA 57.617 34.615 0.00 0.00 0.00 3.53
3013 4694 8.999895 TGCTATTTTAGTTTTCCTACTCCCTAT 58.000 33.333 0.00 0.00 0.00 2.57
3060 4744 5.621555 GCATCATGAAGCAAGAATGACAGTT 60.622 40.000 17.64 0.00 33.37 3.16
3137 5418 8.849168 TGTTGAAGAATGACAGTGTTTATGATT 58.151 29.630 0.00 0.00 0.00 2.57
3138 5419 9.683069 GTTGAAGAATGACAGTGTTTATGATTT 57.317 29.630 0.00 0.00 0.00 2.17
3159 5440 9.958180 TGATTTGATATTCAGTCTTGGTTAGAA 57.042 29.630 0.00 0.00 33.81 2.10
3202 5487 7.984422 TGAAGAATGACAGTGTTTATGATGT 57.016 32.000 0.00 0.00 0.00 3.06
3211 5632 9.617523 TGACAGTGTTTATGATGTGATATTCAT 57.382 29.630 0.00 0.00 36.57 2.57
3234 5655 9.308000 TCATTCTTGGTTTGTTAGAAATATGGT 57.692 29.630 0.00 0.00 32.20 3.55
3267 5688 5.763204 TGTTCAAGTGGTTAGTTTGGATCTC 59.237 40.000 0.00 0.00 0.00 2.75
3268 5689 4.566004 TCAAGTGGTTAGTTTGGATCTCG 58.434 43.478 0.00 0.00 0.00 4.04
3295 5719 8.341903 TCTTCCATATGTTTATATGTTGTTGCG 58.658 33.333 1.24 0.00 42.97 4.85
3307 5731 9.772973 TTATATGTTGTTGCGGAGAAGTAATAT 57.227 29.630 0.00 0.00 0.00 1.28
3375 5799 5.703592 TGGTGTGATCAGTATTGTTTGTACC 59.296 40.000 0.00 0.00 0.00 3.34
3377 5801 6.374333 GGTGTGATCAGTATTGTTTGTACCAT 59.626 38.462 0.00 0.00 0.00 3.55
3379 5803 7.119116 GTGTGATCAGTATTGTTTGTACCATCA 59.881 37.037 0.00 0.00 0.00 3.07
3380 5804 7.828717 TGTGATCAGTATTGTTTGTACCATCAT 59.171 33.333 0.00 0.00 30.65 2.45
3381 5805 8.124823 GTGATCAGTATTGTTTGTACCATCATG 58.875 37.037 0.00 0.00 30.65 3.07
3382 5806 6.435430 TCAGTATTGTTTGTACCATCATGC 57.565 37.500 0.00 0.00 0.00 4.06
3383 5807 5.356751 TCAGTATTGTTTGTACCATCATGCC 59.643 40.000 0.00 0.00 0.00 4.40
3384 5808 4.644685 AGTATTGTTTGTACCATCATGCCC 59.355 41.667 0.00 0.00 0.00 5.36
3385 5809 2.897271 TGTTTGTACCATCATGCCCT 57.103 45.000 0.00 0.00 0.00 5.19
3386 5810 3.168035 TGTTTGTACCATCATGCCCTT 57.832 42.857 0.00 0.00 0.00 3.95
3387 5811 3.505386 TGTTTGTACCATCATGCCCTTT 58.495 40.909 0.00 0.00 0.00 3.11
3388 5812 4.667573 TGTTTGTACCATCATGCCCTTTA 58.332 39.130 0.00 0.00 0.00 1.85
3389 5813 5.268387 TGTTTGTACCATCATGCCCTTTAT 58.732 37.500 0.00 0.00 0.00 1.40
3392 5816 7.563188 TGTTTGTACCATCATGCCCTTTATTAT 59.437 33.333 0.00 0.00 0.00 1.28
3396 5820 9.295825 TGTACCATCATGCCCTTTATTATAAAG 57.704 33.333 15.62 15.62 0.00 1.85
3397 5821 7.781324 ACCATCATGCCCTTTATTATAAAGG 57.219 36.000 28.01 28.01 44.90 3.11
3407 5831 7.111136 CCTTTATTATAAAGGGGTATGGGGT 57.889 40.000 27.53 0.00 42.32 4.95
3408 5832 8.234601 CCTTTATTATAAAGGGGTATGGGGTA 57.765 38.462 27.53 0.00 42.32 3.69
3409 5833 8.680654 CCTTTATTATAAAGGGGTATGGGGTAA 58.319 37.037 27.53 0.00 42.32 2.85
3412 5836 9.652324 TTATTATAAAGGGGTATGGGGTAATCT 57.348 33.333 0.00 0.00 0.00 2.40
3413 5837 7.578458 TTATAAAGGGGTATGGGGTAATCTC 57.422 40.000 0.00 0.00 0.00 2.75
3414 5838 3.448277 AAGGGGTATGGGGTAATCTCA 57.552 47.619 0.00 0.00 0.00 3.27
3415 5839 2.991580 AGGGGTATGGGGTAATCTCAG 58.008 52.381 0.00 0.00 0.00 3.35
3416 5840 1.351350 GGGGTATGGGGTAATCTCAGC 59.649 57.143 0.00 0.00 0.00 4.26
3417 5841 1.351350 GGGTATGGGGTAATCTCAGCC 59.649 57.143 0.00 0.00 35.23 4.85
3418 5842 2.054799 GGTATGGGGTAATCTCAGCCA 58.945 52.381 0.00 0.00 37.84 4.75
3419 5843 2.644798 GGTATGGGGTAATCTCAGCCAT 59.355 50.000 0.00 0.00 37.84 4.40
3420 5844 3.307762 GGTATGGGGTAATCTCAGCCATC 60.308 52.174 0.00 0.00 37.84 3.51
3421 5845 0.758734 TGGGGTAATCTCAGCCATCG 59.241 55.000 0.00 0.00 37.84 3.84
3422 5846 1.048601 GGGGTAATCTCAGCCATCGA 58.951 55.000 0.00 0.00 37.84 3.59
3423 5847 1.625818 GGGGTAATCTCAGCCATCGAT 59.374 52.381 0.00 0.00 37.84 3.59
3424 5848 2.613977 GGGGTAATCTCAGCCATCGATG 60.614 54.545 18.76 18.76 37.84 3.84
3425 5849 2.037772 GGGTAATCTCAGCCATCGATGT 59.962 50.000 23.27 3.55 36.06 3.06
3426 5850 3.062763 GGTAATCTCAGCCATCGATGTG 58.937 50.000 23.27 15.93 0.00 3.21
3427 5851 2.996249 AATCTCAGCCATCGATGTGT 57.004 45.000 23.27 7.74 0.00 3.72
3428 5852 2.996249 ATCTCAGCCATCGATGTGTT 57.004 45.000 23.27 10.50 0.00 3.32
3429 5853 2.768253 TCTCAGCCATCGATGTGTTT 57.232 45.000 23.27 3.76 0.00 2.83
3430 5854 3.885724 TCTCAGCCATCGATGTGTTTA 57.114 42.857 23.27 4.83 0.00 2.01
3431 5855 3.785486 TCTCAGCCATCGATGTGTTTAG 58.215 45.455 23.27 13.48 0.00 1.85
3432 5856 2.868583 CTCAGCCATCGATGTGTTTAGG 59.131 50.000 23.27 7.93 0.00 2.69
3433 5857 1.942657 CAGCCATCGATGTGTTTAGGG 59.057 52.381 23.27 7.19 0.00 3.53
3434 5858 1.837439 AGCCATCGATGTGTTTAGGGA 59.163 47.619 23.27 0.00 0.00 4.20
3435 5859 2.158900 AGCCATCGATGTGTTTAGGGAG 60.159 50.000 23.27 5.72 0.00 4.30
3436 5860 2.838736 CCATCGATGTGTTTAGGGAGG 58.161 52.381 23.27 0.11 0.00 4.30
3437 5861 2.170607 CCATCGATGTGTTTAGGGAGGT 59.829 50.000 23.27 0.00 0.00 3.85
3438 5862 3.198068 CATCGATGTGTTTAGGGAGGTG 58.802 50.000 17.50 0.00 0.00 4.00
3439 5863 2.253610 TCGATGTGTTTAGGGAGGTGT 58.746 47.619 0.00 0.00 0.00 4.16
3440 5864 3.433343 TCGATGTGTTTAGGGAGGTGTA 58.567 45.455 0.00 0.00 0.00 2.90
3441 5865 3.833650 TCGATGTGTTTAGGGAGGTGTAA 59.166 43.478 0.00 0.00 0.00 2.41
3442 5866 3.930848 CGATGTGTTTAGGGAGGTGTAAC 59.069 47.826 0.00 0.00 0.00 2.50
3443 5867 3.389925 TGTGTTTAGGGAGGTGTAACG 57.610 47.619 0.00 0.00 38.12 3.18
3444 5868 2.964464 TGTGTTTAGGGAGGTGTAACGA 59.036 45.455 0.00 0.00 38.12 3.85
3445 5869 3.387374 TGTGTTTAGGGAGGTGTAACGAA 59.613 43.478 0.00 0.00 38.12 3.85
3446 5870 3.992427 GTGTTTAGGGAGGTGTAACGAAG 59.008 47.826 0.00 0.00 38.12 3.79
3447 5871 2.998670 GTTTAGGGAGGTGTAACGAAGC 59.001 50.000 0.00 0.00 38.12 3.86
3448 5872 1.927487 TAGGGAGGTGTAACGAAGCA 58.073 50.000 0.00 0.00 38.12 3.91
3449 5873 0.608640 AGGGAGGTGTAACGAAGCAG 59.391 55.000 0.00 0.00 38.12 4.24
3450 5874 0.606604 GGGAGGTGTAACGAAGCAGA 59.393 55.000 0.00 0.00 38.12 4.26
3451 5875 1.001633 GGGAGGTGTAACGAAGCAGAA 59.998 52.381 0.00 0.00 38.12 3.02
3452 5876 2.338500 GGAGGTGTAACGAAGCAGAAG 58.662 52.381 0.00 0.00 38.12 2.85
3453 5877 2.288886 GGAGGTGTAACGAAGCAGAAGT 60.289 50.000 0.00 0.00 38.12 3.01
3454 5878 2.731976 GAGGTGTAACGAAGCAGAAGTG 59.268 50.000 0.00 0.00 38.12 3.16
3508 6001 7.395190 TGAGCAATGTAAATGACTAAATGCT 57.605 32.000 0.00 0.00 43.64 3.79
3713 6206 9.764363 TTACAAGTGTTCTCCTGCTATATATTG 57.236 33.333 0.00 0.00 0.00 1.90
3718 6211 8.874156 AGTGTTCTCCTGCTATATATTGAATGA 58.126 33.333 0.00 0.00 0.00 2.57
3744 6237 7.470935 AACCAAAAGACATTCATCATCATCA 57.529 32.000 0.00 0.00 0.00 3.07
3745 6238 7.655521 ACCAAAAGACATTCATCATCATCAT 57.344 32.000 0.00 0.00 0.00 2.45
3746 6239 7.713750 ACCAAAAGACATTCATCATCATCATC 58.286 34.615 0.00 0.00 0.00 2.92
3759 6252 4.348754 TCATCATCATCCATCTTGCAGGTA 59.651 41.667 0.00 0.00 0.00 3.08
3760 6253 4.347360 TCATCATCCATCTTGCAGGTAG 57.653 45.455 0.00 0.00 0.00 3.18
3761 6254 3.072038 TCATCATCCATCTTGCAGGTAGG 59.928 47.826 0.00 0.00 0.00 3.18
3762 6255 1.141657 TCATCCATCTTGCAGGTAGGC 59.858 52.381 0.00 0.00 0.00 3.93
3763 6256 1.142465 CATCCATCTTGCAGGTAGGCT 59.858 52.381 0.00 0.00 34.04 4.58
3764 6257 0.833287 TCCATCTTGCAGGTAGGCTC 59.167 55.000 0.00 0.00 34.04 4.70
3765 6258 0.179034 CCATCTTGCAGGTAGGCTCC 60.179 60.000 0.00 0.00 34.04 4.70
3766 6259 0.835941 CATCTTGCAGGTAGGCTCCT 59.164 55.000 0.00 0.00 38.51 3.69
3767 6260 2.042464 CATCTTGCAGGTAGGCTCCTA 58.958 52.381 0.00 0.00 35.87 2.94
3768 6261 2.478872 TCTTGCAGGTAGGCTCCTAT 57.521 50.000 0.00 0.00 35.87 2.57
3769 6262 3.612795 TCTTGCAGGTAGGCTCCTATA 57.387 47.619 0.00 0.00 35.87 1.31
3770 6263 3.231818 TCTTGCAGGTAGGCTCCTATAC 58.768 50.000 0.00 0.00 35.87 1.47
3771 6264 3.117093 TCTTGCAGGTAGGCTCCTATACT 60.117 47.826 0.00 0.00 35.87 2.12
3772 6265 4.105858 TCTTGCAGGTAGGCTCCTATACTA 59.894 45.833 0.00 0.00 35.87 1.82
3773 6266 4.035612 TGCAGGTAGGCTCCTATACTAG 57.964 50.000 0.00 0.00 35.87 2.57
3775 6268 3.358118 CAGGTAGGCTCCTATACTAGGC 58.642 54.545 0.00 0.00 45.82 3.93
3776 6269 2.994581 AGGTAGGCTCCTATACTAGGCA 59.005 50.000 0.00 0.00 45.82 4.75
3777 6270 3.401683 AGGTAGGCTCCTATACTAGGCAA 59.598 47.826 0.00 0.00 45.82 4.52
3778 6271 3.510753 GGTAGGCTCCTATACTAGGCAAC 59.489 52.174 0.00 0.00 45.82 4.17
3779 6272 3.330126 AGGCTCCTATACTAGGCAACA 57.670 47.619 0.00 0.00 45.82 3.33
3780 6273 3.654273 AGGCTCCTATACTAGGCAACAA 58.346 45.455 0.00 0.00 45.82 2.83
3781 6274 4.235372 AGGCTCCTATACTAGGCAACAAT 58.765 43.478 0.00 0.00 45.82 2.71
3782 6275 4.284746 AGGCTCCTATACTAGGCAACAATC 59.715 45.833 0.00 0.00 45.82 2.67
3783 6276 4.040461 GGCTCCTATACTAGGCAACAATCA 59.960 45.833 0.00 0.00 45.82 2.57
3784 6277 5.454755 GGCTCCTATACTAGGCAACAATCAA 60.455 44.000 0.00 0.00 45.82 2.57
3785 6278 5.698545 GCTCCTATACTAGGCAACAATCAAG 59.301 44.000 0.00 0.00 45.82 3.02
3786 6279 6.463049 GCTCCTATACTAGGCAACAATCAAGA 60.463 42.308 0.00 0.00 45.82 3.02
3787 6280 7.432148 TCCTATACTAGGCAACAATCAAGAA 57.568 36.000 0.00 0.00 45.82 2.52
3788 6281 8.034313 TCCTATACTAGGCAACAATCAAGAAT 57.966 34.615 0.00 0.00 45.82 2.40
3789 6282 7.933577 TCCTATACTAGGCAACAATCAAGAATG 59.066 37.037 0.00 0.00 45.82 2.67
3790 6283 6.949352 ATACTAGGCAACAATCAAGAATGG 57.051 37.500 0.00 0.00 41.41 3.16
3791 6284 3.445096 ACTAGGCAACAATCAAGAATGGC 59.555 43.478 0.00 0.00 41.41 4.40
3792 6285 2.250031 AGGCAACAATCAAGAATGGCA 58.750 42.857 0.00 0.00 38.86 4.92
3807 6300 0.337773 TGGCACTCCATCTCCTCTCT 59.662 55.000 0.00 0.00 37.47 3.10
3826 6319 2.434185 GGTCCGCGTGCTTCATCA 60.434 61.111 4.92 0.00 0.00 3.07
3828 6321 1.369091 GGTCCGCGTGCTTCATCATT 61.369 55.000 4.92 0.00 0.00 2.57
3850 6343 1.664649 CTCGTCGTTGCTTCTGCCA 60.665 57.895 0.00 0.00 38.71 4.92
3861 6354 1.202580 GCTTCTGCCACCGACTATGAT 60.203 52.381 0.00 0.00 0.00 2.45
3866 6359 3.449377 TCTGCCACCGACTATGATTGTAA 59.551 43.478 0.00 0.00 0.00 2.41
3871 6364 5.932303 GCCACCGACTATGATTGTAATATGT 59.068 40.000 0.00 0.00 0.00 2.29
3872 6365 6.128553 GCCACCGACTATGATTGTAATATGTG 60.129 42.308 0.00 0.00 0.00 3.21
3873 6366 6.929049 CCACCGACTATGATTGTAATATGTGT 59.071 38.462 0.00 0.00 0.00 3.72
3874 6367 7.116376 CCACCGACTATGATTGTAATATGTGTC 59.884 40.741 0.00 0.00 0.00 3.67
3875 6368 7.116376 CACCGACTATGATTGTAATATGTGTCC 59.884 40.741 0.00 0.00 0.00 4.02
3892 6385 2.115266 CTTGGGGGCGGTGACTTT 59.885 61.111 0.00 0.00 0.00 2.66
3898 6391 1.302192 GGGCGGTGACTTTGCACTA 60.302 57.895 0.00 0.00 38.78 2.74
3908 6401 3.265791 GACTTTGCACTACAGGGATGAG 58.734 50.000 0.00 0.00 0.00 2.90
3916 6409 3.110705 ACTACAGGGATGAGCTCACATT 58.889 45.455 20.97 2.51 0.00 2.71
3936 6429 5.245526 ACATTGGGTTATATCTACCGGAGAC 59.754 44.000 9.46 0.00 36.87 3.36
3937 6430 4.736611 TGGGTTATATCTACCGGAGACT 57.263 45.455 9.46 1.02 36.87 3.24
3952 6445 3.004944 CGGAGACTAGAGCCTTATTGGTC 59.995 52.174 0.00 0.00 38.35 4.02
3981 6474 3.799917 GCTGCCAGCAACTTAAATGTGTT 60.800 43.478 12.82 0.00 41.89 3.32
4000 6493 4.904154 GTGTTAACGAAGCAACATGTTCTC 59.096 41.667 8.48 3.64 37.90 2.87
4015 6508 2.158475 TGTTCTCCCCTGCTTCACATTT 60.158 45.455 0.00 0.00 0.00 2.32
4021 6514 3.198635 TCCCCTGCTTCACATTTCTCTAG 59.801 47.826 0.00 0.00 0.00 2.43
4024 6517 4.633565 CCCTGCTTCACATTTCTCTAGTTC 59.366 45.833 0.00 0.00 0.00 3.01
4031 6524 9.547753 GCTTCACATTTCTCTAGTTCCATATAA 57.452 33.333 0.00 0.00 0.00 0.98
4045 6538 8.798859 AGTTCCATATAATACATGAAGATGCC 57.201 34.615 0.00 0.00 32.14 4.40
4048 6541 8.741603 TCCATATAATACATGAAGATGCCATG 57.258 34.615 0.00 0.00 45.03 3.66
4053 6546 2.750301 CATGAAGATGCCATGTGTCG 57.250 50.000 0.00 0.00 37.28 4.35
4054 6547 2.011947 CATGAAGATGCCATGTGTCGT 58.988 47.619 0.00 0.00 37.28 4.34
4055 6548 2.183478 TGAAGATGCCATGTGTCGTT 57.817 45.000 0.00 0.00 0.00 3.85
4056 6549 2.076100 TGAAGATGCCATGTGTCGTTC 58.924 47.619 0.00 0.00 0.00 3.95
4057 6550 2.076100 GAAGATGCCATGTGTCGTTCA 58.924 47.619 0.00 0.00 0.00 3.18
4058 6551 1.730501 AGATGCCATGTGTCGTTCAG 58.269 50.000 0.00 0.00 0.00 3.02
4059 6552 1.276138 AGATGCCATGTGTCGTTCAGA 59.724 47.619 0.00 0.00 0.00 3.27
4060 6553 2.076100 GATGCCATGTGTCGTTCAGAA 58.924 47.619 0.00 0.00 0.00 3.02
4061 6554 2.183478 TGCCATGTGTCGTTCAGAAT 57.817 45.000 0.00 0.00 0.00 2.40
4062 6555 1.805943 TGCCATGTGTCGTTCAGAATG 59.194 47.619 0.00 0.00 37.54 2.67
4063 6556 1.806542 GCCATGTGTCGTTCAGAATGT 59.193 47.619 2.18 0.00 37.40 2.71
4064 6557 2.226437 GCCATGTGTCGTTCAGAATGTT 59.774 45.455 2.18 0.00 37.40 2.71
4065 6558 3.304659 GCCATGTGTCGTTCAGAATGTTT 60.305 43.478 2.18 0.00 37.40 2.83
4066 6559 4.792704 GCCATGTGTCGTTCAGAATGTTTT 60.793 41.667 2.18 0.00 37.40 2.43
4067 6560 5.280945 CCATGTGTCGTTCAGAATGTTTTT 58.719 37.500 2.18 0.00 37.40 1.94
4087 6580 1.348938 TTTTTGCGGACACGTGTCG 59.651 52.632 35.21 30.02 45.65 4.35
4101 6594 1.995484 CGTGTCGCTCAGAATGTGATT 59.005 47.619 0.00 0.00 37.40 2.57
4112 6605 3.071874 GAATGTGATTCTGGTGGGACA 57.928 47.619 0.00 0.00 36.37 4.02
4125 6619 5.780282 TCTGGTGGGACATGTAATAGGATAG 59.220 44.000 0.00 0.00 44.52 2.08
4126 6620 4.844085 TGGTGGGACATGTAATAGGATAGG 59.156 45.833 0.00 0.00 44.52 2.57
4127 6621 5.091552 GGTGGGACATGTAATAGGATAGGA 58.908 45.833 0.00 0.00 44.52 2.94
4128 6622 5.726793 GGTGGGACATGTAATAGGATAGGAT 59.273 44.000 0.00 0.00 44.52 3.24
4158 6660 3.311322 TGTTCTTGTCTGGTTAGCGTTTG 59.689 43.478 0.00 0.00 0.00 2.93
4180 6682 3.411415 CTTTTGGAGCTCGGCTTTATG 57.589 47.619 7.83 0.00 39.88 1.90
4188 6690 1.676014 GCTCGGCTTTATGTGGTCTGT 60.676 52.381 0.00 0.00 0.00 3.41
4191 6693 1.933853 CGGCTTTATGTGGTCTGTAGC 59.066 52.381 0.00 0.00 0.00 3.58
4194 6696 3.369471 GGCTTTATGTGGTCTGTAGCTCA 60.369 47.826 0.00 0.00 0.00 4.26
4196 6701 4.272018 GCTTTATGTGGTCTGTAGCTCATG 59.728 45.833 0.00 0.00 37.73 3.07
4199 6704 1.977854 TGTGGTCTGTAGCTCATGGTT 59.022 47.619 0.00 0.00 0.00 3.67
4200 6705 2.289631 TGTGGTCTGTAGCTCATGGTTG 60.290 50.000 0.00 0.00 0.00 3.77
4201 6706 1.278985 TGGTCTGTAGCTCATGGTTGG 59.721 52.381 0.00 0.00 0.00 3.77
4202 6707 1.373570 GTCTGTAGCTCATGGTTGGC 58.626 55.000 0.00 0.00 0.00 4.52
4203 6708 1.065854 GTCTGTAGCTCATGGTTGGCT 60.066 52.381 0.00 0.91 39.74 4.75
4204 6709 1.208052 TCTGTAGCTCATGGTTGGCTC 59.792 52.381 0.00 2.21 37.50 4.70
4205 6710 1.209019 CTGTAGCTCATGGTTGGCTCT 59.791 52.381 0.00 0.00 37.50 4.09
4206 6711 1.065926 TGTAGCTCATGGTTGGCTCTG 60.066 52.381 0.00 0.00 37.50 3.35
4207 6712 0.107508 TAGCTCATGGTTGGCTCTGC 60.108 55.000 0.00 0.00 37.50 4.26
4211 6716 0.111061 TCATGGTTGGCTCTGCTGTT 59.889 50.000 0.00 0.00 0.00 3.16
4218 6723 3.317993 GGTTGGCTCTGCTGTTAGAAAAA 59.682 43.478 0.00 0.00 0.00 1.94
4234 6739 5.549742 AGAAAAATTGGATGCTTGGTTCA 57.450 34.783 0.00 0.00 0.00 3.18
4253 6758 2.264813 CATCTTTTGGATGCTTTGCCG 58.735 47.619 0.00 0.00 44.21 5.69
4285 6790 4.345257 GGAGCCAGAGTACCTCATATGAAA 59.655 45.833 6.90 0.00 32.06 2.69
4288 6793 6.904626 AGCCAGAGTACCTCATATGAAAAAT 58.095 36.000 6.90 0.00 32.06 1.82
4290 6795 8.153550 AGCCAGAGTACCTCATATGAAAAATAG 58.846 37.037 6.90 0.00 32.06 1.73
4316 6822 8.568732 AAGTTTTACGTGTTGGATGTTTTATG 57.431 30.769 0.00 0.00 0.00 1.90
4333 6856 0.609131 ATGGTTTCTTGGGTGCTCGG 60.609 55.000 0.00 0.00 0.00 4.63
4352 6875 2.131023 GGGATTTCCAGGTCTGATCCT 58.869 52.381 13.43 0.00 37.14 3.24
4353 6876 2.511637 GGGATTTCCAGGTCTGATCCTT 59.488 50.000 13.43 0.00 37.14 3.36
4355 6878 4.445019 GGGATTTCCAGGTCTGATCCTTAC 60.445 50.000 13.43 0.00 37.14 2.34
4356 6879 4.445019 GGATTTCCAGGTCTGATCCTTACC 60.445 50.000 8.90 0.00 35.37 2.85
4357 6880 3.491766 TTCCAGGTCTGATCCTTACCT 57.508 47.619 5.20 5.20 44.54 3.08
4360 6883 2.950990 AGGTCTGATCCTTACCTGGT 57.049 50.000 4.05 4.05 42.08 4.00
4361 6884 3.207044 AGGTCTGATCCTTACCTGGTT 57.793 47.619 3.84 0.00 42.08 3.67
4362 6885 3.532102 AGGTCTGATCCTTACCTGGTTT 58.468 45.455 3.84 0.00 42.08 3.27
4363 6886 3.519913 AGGTCTGATCCTTACCTGGTTTC 59.480 47.826 3.84 0.00 42.08 2.78
4364 6887 3.519913 GGTCTGATCCTTACCTGGTTTCT 59.480 47.826 3.84 0.00 0.00 2.52
4366 6889 4.468153 GTCTGATCCTTACCTGGTTTCTCT 59.532 45.833 3.84 0.00 0.00 3.10
4367 6890 5.046231 GTCTGATCCTTACCTGGTTTCTCTT 60.046 44.000 3.84 0.00 0.00 2.85
4368 6891 6.154706 GTCTGATCCTTACCTGGTTTCTCTTA 59.845 42.308 3.84 0.00 0.00 2.10
4369 6892 6.903534 TCTGATCCTTACCTGGTTTCTCTTAT 59.096 38.462 3.84 0.00 0.00 1.73
4370 6893 7.403231 TCTGATCCTTACCTGGTTTCTCTTATT 59.597 37.037 3.84 0.00 0.00 1.40
4371 6894 8.618240 TGATCCTTACCTGGTTTCTCTTATTA 57.382 34.615 3.84 0.00 0.00 0.98
4372 6895 8.705594 TGATCCTTACCTGGTTTCTCTTATTAG 58.294 37.037 3.84 0.00 0.00 1.73
4373 6896 8.625467 ATCCTTACCTGGTTTCTCTTATTAGT 57.375 34.615 3.84 0.00 0.00 2.24
4374 6897 9.725206 ATCCTTACCTGGTTTCTCTTATTAGTA 57.275 33.333 3.84 0.00 0.00 1.82
4375 6898 8.975295 TCCTTACCTGGTTTCTCTTATTAGTAC 58.025 37.037 3.84 0.00 0.00 2.73
4378 6901 7.184067 ACCTGGTTTCTCTTATTAGTACCAG 57.816 40.000 10.59 10.59 42.93 4.00
4522 10543 2.354403 GCAATCTTGGGCATGCTCTTTT 60.354 45.455 20.42 4.14 35.93 2.27
4597 10620 6.037172 GCTTTGCGTCTAAAAATCTAGGATGA 59.963 38.462 0.00 0.00 0.00 2.92
4607 10630 9.495572 CTAAAAATCTAGGATGAATGAGGTACC 57.504 37.037 2.73 2.73 0.00 3.34
4614 10637 5.831103 AGGATGAATGAGGTACCAAACAAT 58.169 37.500 15.94 4.39 0.00 2.71
4627 10650 3.448301 ACCAAACAATCTGGCATATGGTG 59.552 43.478 4.56 0.00 38.44 4.17
4657 10714 6.238484 GCTTGAGTTGAAAGTGTACAATCAGT 60.238 38.462 0.00 0.00 0.00 3.41
4686 10743 7.823745 ATTAATCATCAAATTAGCCGGACTT 57.176 32.000 5.05 0.00 0.00 3.01
4687 10744 8.918202 ATTAATCATCAAATTAGCCGGACTTA 57.082 30.769 5.05 0.00 0.00 2.24
4688 10745 8.918202 TTAATCATCAAATTAGCCGGACTTAT 57.082 30.769 5.05 0.00 0.00 1.73
4689 10746 7.823745 AATCATCAAATTAGCCGGACTTATT 57.176 32.000 5.05 4.92 0.00 1.40
4690 10747 7.823745 ATCATCAAATTAGCCGGACTTATTT 57.176 32.000 5.05 11.04 37.95 1.40
4691 10748 7.639113 TCATCAAATTAGCCGGACTTATTTT 57.361 32.000 5.05 0.63 35.88 1.82
4692 10749 8.062065 TCATCAAATTAGCCGGACTTATTTTT 57.938 30.769 5.05 1.90 35.88 1.94
4693 10750 9.179909 TCATCAAATTAGCCGGACTTATTTTTA 57.820 29.630 5.05 5.36 35.88 1.52
4694 10751 9.233232 CATCAAATTAGCCGGACTTATTTTTAC 57.767 33.333 5.05 0.00 35.88 2.01
4695 10752 7.764331 TCAAATTAGCCGGACTTATTTTTACC 58.236 34.615 5.05 0.00 35.88 2.85
4696 10753 6.704289 AATTAGCCGGACTTATTTTTACCC 57.296 37.500 5.05 0.00 0.00 3.69
4697 10754 5.440207 TTAGCCGGACTTATTTTTACCCT 57.560 39.130 5.05 0.00 0.00 4.34
4698 10755 4.311520 AGCCGGACTTATTTTTACCCTT 57.688 40.909 5.05 0.00 0.00 3.95
4699 10756 4.669700 AGCCGGACTTATTTTTACCCTTT 58.330 39.130 5.05 0.00 0.00 3.11
4700 10757 5.818887 AGCCGGACTTATTTTTACCCTTTA 58.181 37.500 5.05 0.00 0.00 1.85
4701 10758 6.429151 AGCCGGACTTATTTTTACCCTTTAT 58.571 36.000 5.05 0.00 0.00 1.40
4702 10759 6.320418 AGCCGGACTTATTTTTACCCTTTATG 59.680 38.462 5.05 0.00 0.00 1.90
4703 10760 6.095860 GCCGGACTTATTTTTACCCTTTATGT 59.904 38.462 5.05 0.00 0.00 2.29
4704 10761 7.282901 GCCGGACTTATTTTTACCCTTTATGTA 59.717 37.037 5.05 0.00 0.00 2.29
4705 10762 8.615211 CCGGACTTATTTTTACCCTTTATGTAC 58.385 37.037 0.00 0.00 0.00 2.90
4706 10763 8.330302 CGGACTTATTTTTACCCTTTATGTACG 58.670 37.037 0.00 0.00 0.00 3.67
4707 10764 8.124823 GGACTTATTTTTACCCTTTATGTACGC 58.875 37.037 0.00 0.00 0.00 4.42
4708 10765 8.564509 ACTTATTTTTACCCTTTATGTACGCA 57.435 30.769 0.00 0.00 0.00 5.24
4709 10766 9.012161 ACTTATTTTTACCCTTTATGTACGCAA 57.988 29.630 0.00 0.00 0.00 4.85
4710 10767 9.843334 CTTATTTTTACCCTTTATGTACGCAAA 57.157 29.630 0.00 0.00 0.00 3.68
4712 10769 8.920509 ATTTTTACCCTTTATGTACGCAAATC 57.079 30.769 0.00 0.00 0.00 2.17
4713 10770 7.690952 TTTTACCCTTTATGTACGCAAATCT 57.309 32.000 0.00 0.00 0.00 2.40
4714 10771 6.913873 TTACCCTTTATGTACGCAAATCTC 57.086 37.500 0.00 0.00 0.00 2.75
4715 10772 5.099042 ACCCTTTATGTACGCAAATCTCT 57.901 39.130 0.00 0.00 0.00 3.10
4716 10773 5.497474 ACCCTTTATGTACGCAAATCTCTT 58.503 37.500 0.00 0.00 0.00 2.85
4717 10774 5.944007 ACCCTTTATGTACGCAAATCTCTTT 59.056 36.000 0.00 0.00 0.00 2.52
4718 10775 6.128007 ACCCTTTATGTACGCAAATCTCTTTG 60.128 38.462 0.00 0.00 43.81 2.77
4719 10776 6.128007 CCCTTTATGTACGCAAATCTCTTTGT 60.128 38.462 0.62 0.00 43.07 2.83
4727 10784 4.398247 CGCAAATCTCTTTGTGTTCTAGC 58.602 43.478 4.00 0.00 44.27 3.42
4728 10785 4.083855 CGCAAATCTCTTTGTGTTCTAGCA 60.084 41.667 4.00 0.00 44.27 3.49
4729 10786 5.388944 GCAAATCTCTTTGTGTTCTAGCAG 58.611 41.667 0.62 0.00 43.07 4.24
4730 10787 5.049129 GCAAATCTCTTTGTGTTCTAGCAGT 60.049 40.000 0.62 0.00 43.07 4.40
4731 10788 6.369005 CAAATCTCTTTGTGTTCTAGCAGTG 58.631 40.000 0.00 0.00 37.54 3.66
4732 10789 4.937201 TCTCTTTGTGTTCTAGCAGTGA 57.063 40.909 0.00 0.00 0.00 3.41
4733 10790 5.276461 TCTCTTTGTGTTCTAGCAGTGAA 57.724 39.130 0.00 0.00 0.00 3.18
4734 10791 5.050490 TCTCTTTGTGTTCTAGCAGTGAAC 58.950 41.667 0.00 8.80 42.77 3.18
4740 10797 4.335400 TGTTCTAGCAGTGAACACATCA 57.665 40.909 12.83 0.00 45.77 3.07
4741 10798 4.702831 TGTTCTAGCAGTGAACACATCAA 58.297 39.130 12.83 0.00 45.77 2.57
4742 10799 5.308014 TGTTCTAGCAGTGAACACATCAAT 58.692 37.500 12.83 0.00 45.77 2.57
4743 10800 5.409520 TGTTCTAGCAGTGAACACATCAATC 59.590 40.000 12.83 0.00 45.77 2.67
4744 10801 4.507710 TCTAGCAGTGAACACATCAATCC 58.492 43.478 7.68 0.00 40.50 3.01
4745 10802 3.144657 AGCAGTGAACACATCAATCCA 57.855 42.857 7.68 0.00 40.50 3.41
4746 10803 2.816087 AGCAGTGAACACATCAATCCAC 59.184 45.455 7.68 0.00 40.50 4.02
4747 10804 2.816087 GCAGTGAACACATCAATCCACT 59.184 45.455 7.68 0.00 40.50 4.00
4748 10805 3.120060 GCAGTGAACACATCAATCCACTC 60.120 47.826 7.68 0.00 40.50 3.51
4749 10806 3.438087 CAGTGAACACATCAATCCACTCC 59.562 47.826 7.68 0.00 40.50 3.85
4750 10807 2.749621 GTGAACACATCAATCCACTCCC 59.250 50.000 0.00 0.00 40.50 4.30
4751 10808 2.644299 TGAACACATCAATCCACTCCCT 59.356 45.455 0.00 0.00 34.30 4.20
4752 10809 3.843619 TGAACACATCAATCCACTCCCTA 59.156 43.478 0.00 0.00 34.30 3.53
4753 10810 4.288366 TGAACACATCAATCCACTCCCTAA 59.712 41.667 0.00 0.00 34.30 2.69
4754 10811 5.044919 TGAACACATCAATCCACTCCCTAAT 60.045 40.000 0.00 0.00 34.30 1.73
4755 10812 4.785301 ACACATCAATCCACTCCCTAATG 58.215 43.478 0.00 0.00 0.00 1.90
4756 10813 4.474651 ACACATCAATCCACTCCCTAATGA 59.525 41.667 0.00 0.00 0.00 2.57
4757 10814 5.061853 CACATCAATCCACTCCCTAATGAG 58.938 45.833 0.00 0.00 38.37 2.90
4758 10815 3.845781 TCAATCCACTCCCTAATGAGC 57.154 47.619 0.00 0.00 35.72 4.26
4759 10816 3.114606 TCAATCCACTCCCTAATGAGCA 58.885 45.455 0.00 0.00 35.72 4.26
4760 10817 3.135348 TCAATCCACTCCCTAATGAGCAG 59.865 47.826 0.00 0.00 35.72 4.24
4761 10818 2.550277 TCCACTCCCTAATGAGCAGA 57.450 50.000 0.00 0.00 35.72 4.26
4762 10819 3.051940 TCCACTCCCTAATGAGCAGAT 57.948 47.619 0.00 0.00 35.72 2.90
4763 10820 3.387962 TCCACTCCCTAATGAGCAGATT 58.612 45.455 0.00 0.00 35.72 2.40
4764 10821 3.782523 TCCACTCCCTAATGAGCAGATTT 59.217 43.478 0.00 0.00 35.72 2.17
4765 10822 3.881688 CCACTCCCTAATGAGCAGATTTG 59.118 47.826 0.00 0.00 35.72 2.32
4766 10823 4.384537 CCACTCCCTAATGAGCAGATTTGA 60.385 45.833 0.00 0.00 35.72 2.69
4767 10824 4.815308 CACTCCCTAATGAGCAGATTTGAG 59.185 45.833 0.00 0.00 35.72 3.02
4768 10825 4.472833 ACTCCCTAATGAGCAGATTTGAGT 59.527 41.667 0.00 0.00 35.72 3.41
4769 10826 5.028549 TCCCTAATGAGCAGATTTGAGTC 57.971 43.478 0.00 0.00 0.00 3.36
4770 10827 4.133078 CCCTAATGAGCAGATTTGAGTCC 58.867 47.826 0.00 0.00 0.00 3.85
4771 10828 4.141528 CCCTAATGAGCAGATTTGAGTCCT 60.142 45.833 0.00 0.00 0.00 3.85
4772 10829 5.055812 CCTAATGAGCAGATTTGAGTCCTC 58.944 45.833 0.00 0.00 0.00 3.71
4773 10830 4.840716 AATGAGCAGATTTGAGTCCTCT 57.159 40.909 0.00 0.00 0.00 3.69
4774 10831 3.883830 TGAGCAGATTTGAGTCCTCTC 57.116 47.619 0.00 0.00 40.79 3.20
4775 10832 3.439154 TGAGCAGATTTGAGTCCTCTCT 58.561 45.455 0.00 0.00 40.98 3.10
4776 10833 4.604156 TGAGCAGATTTGAGTCCTCTCTA 58.396 43.478 0.00 0.00 40.98 2.43
4777 10834 5.019470 TGAGCAGATTTGAGTCCTCTCTAA 58.981 41.667 0.00 0.00 40.98 2.10
4778 10835 5.105554 TGAGCAGATTTGAGTCCTCTCTAAC 60.106 44.000 0.00 0.00 40.98 2.34
4779 10836 4.161377 AGCAGATTTGAGTCCTCTCTAACC 59.839 45.833 0.00 0.00 40.98 2.85
4780 10837 4.682050 GCAGATTTGAGTCCTCTCTAACCC 60.682 50.000 0.00 0.00 40.98 4.11
4781 10838 4.467795 CAGATTTGAGTCCTCTCTAACCCA 59.532 45.833 0.00 0.00 40.98 4.51
4782 10839 4.468153 AGATTTGAGTCCTCTCTAACCCAC 59.532 45.833 0.00 0.00 40.98 4.61
4783 10840 2.233305 TGAGTCCTCTCTAACCCACC 57.767 55.000 0.00 0.00 40.98 4.61
4784 10841 1.431633 TGAGTCCTCTCTAACCCACCA 59.568 52.381 0.00 0.00 40.98 4.17
4785 10842 1.826096 GAGTCCTCTCTAACCCACCAC 59.174 57.143 0.00 0.00 37.68 4.16
4786 10843 0.531200 GTCCTCTCTAACCCACCACG 59.469 60.000 0.00 0.00 0.00 4.94
4787 10844 0.613853 TCCTCTCTAACCCACCACGG 60.614 60.000 0.00 0.00 0.00 4.94
4788 10845 1.218316 CTCTCTAACCCACCACGGC 59.782 63.158 0.00 0.00 0.00 5.68
4789 10846 1.229082 TCTCTAACCCACCACGGCT 60.229 57.895 0.00 0.00 0.00 5.52
4790 10847 0.834687 TCTCTAACCCACCACGGCTT 60.835 55.000 0.00 0.00 0.00 4.35
4791 10848 0.899720 CTCTAACCCACCACGGCTTA 59.100 55.000 0.00 0.00 0.00 3.09
4792 10849 1.276989 CTCTAACCCACCACGGCTTAA 59.723 52.381 0.00 0.00 0.00 1.85
4793 10850 1.698532 TCTAACCCACCACGGCTTAAA 59.301 47.619 0.00 0.00 0.00 1.52
4794 10851 2.106166 TCTAACCCACCACGGCTTAAAA 59.894 45.455 0.00 0.00 0.00 1.52
4795 10852 1.777941 AACCCACCACGGCTTAAAAA 58.222 45.000 0.00 0.00 0.00 1.94
4823 10880 8.728088 AATTAAACACTAAAATCAAGCTGACG 57.272 30.769 0.00 0.00 0.00 4.35
4824 10881 7.485418 TTAAACACTAAAATCAAGCTGACGA 57.515 32.000 0.00 0.00 0.00 4.20
4825 10882 5.597813 AACACTAAAATCAAGCTGACGAG 57.402 39.130 0.00 0.00 0.00 4.18
4826 10883 4.883083 ACACTAAAATCAAGCTGACGAGA 58.117 39.130 0.00 0.00 0.00 4.04
4827 10884 4.686554 ACACTAAAATCAAGCTGACGAGAC 59.313 41.667 0.00 0.00 0.00 3.36
4828 10885 4.926238 CACTAAAATCAAGCTGACGAGACT 59.074 41.667 0.00 0.00 0.00 3.24
4829 10886 4.926238 ACTAAAATCAAGCTGACGAGACTG 59.074 41.667 0.00 0.00 0.00 3.51
4830 10887 2.376808 AATCAAGCTGACGAGACTGG 57.623 50.000 0.00 0.00 0.00 4.00
4831 10888 1.261480 ATCAAGCTGACGAGACTGGT 58.739 50.000 0.00 0.00 0.00 4.00
4832 10889 1.905637 TCAAGCTGACGAGACTGGTA 58.094 50.000 0.00 0.00 0.00 3.25
4833 10890 1.813178 TCAAGCTGACGAGACTGGTAG 59.187 52.381 0.00 0.00 0.00 3.18
4834 10891 1.542030 CAAGCTGACGAGACTGGTAGT 59.458 52.381 0.00 0.00 0.00 2.73
4835 10892 1.455248 AGCTGACGAGACTGGTAGTC 58.545 55.000 0.79 0.79 45.38 2.59
4843 10900 2.791170 GACTGGTAGTCGATCCCGT 58.209 57.895 0.00 0.00 35.28 5.28
4844 10901 0.381089 GACTGGTAGTCGATCCCGTG 59.619 60.000 6.19 0.01 35.28 4.94
4845 10902 0.034767 ACTGGTAGTCGATCCCGTGA 60.035 55.000 0.00 0.00 37.05 4.35
4846 10903 0.381089 CTGGTAGTCGATCCCGTGAC 59.619 60.000 0.00 0.00 37.05 3.67
4847 10904 1.354506 GGTAGTCGATCCCGTGACG 59.645 63.158 0.00 0.00 40.05 4.35
4848 10905 1.298190 GTAGTCGATCCCGTGACGC 60.298 63.158 0.00 0.00 40.05 5.19
4849 10906 1.450848 TAGTCGATCCCGTGACGCT 60.451 57.895 0.00 0.00 40.05 5.07
4850 10907 1.712018 TAGTCGATCCCGTGACGCTG 61.712 60.000 0.00 0.00 40.05 5.18
4851 10908 2.748647 TCGATCCCGTGACGCTGA 60.749 61.111 0.00 0.00 37.05 4.26
4852 10909 2.180769 CGATCCCGTGACGCTGAA 59.819 61.111 0.00 0.00 0.00 3.02
4853 10910 1.445410 CGATCCCGTGACGCTGAAA 60.445 57.895 0.00 0.00 0.00 2.69
4854 10911 1.413767 CGATCCCGTGACGCTGAAAG 61.414 60.000 0.00 0.00 0.00 2.62
4868 10925 1.000938 CTGAAAGCACTTCCACAAGGC 60.001 52.381 0.00 0.00 33.37 4.35
4869 10926 1.322442 GAAAGCACTTCCACAAGGCT 58.678 50.000 0.00 0.00 37.60 4.58
4870 10927 2.158682 TGAAAGCACTTCCACAAGGCTA 60.159 45.455 0.00 0.00 35.99 3.93
4871 10928 2.191128 AAGCACTTCCACAAGGCTAG 57.809 50.000 0.00 0.00 35.99 3.42
4872 10929 0.326264 AGCACTTCCACAAGGCTAGG 59.674 55.000 0.00 0.00 35.54 3.02
4873 10930 0.678048 GCACTTCCACAAGGCTAGGG 60.678 60.000 0.00 0.00 33.37 3.53
4874 10931 0.035056 CACTTCCACAAGGCTAGGGG 60.035 60.000 0.00 0.00 33.37 4.79
4875 10932 1.077429 CTTCCACAAGGCTAGGGGC 60.077 63.158 0.00 0.00 40.90 5.80
4884 10941 2.736670 AGGCTAGGGGCTATGTTTTG 57.263 50.000 0.00 0.00 46.85 2.44
4885 10942 1.923148 AGGCTAGGGGCTATGTTTTGT 59.077 47.619 0.00 0.00 46.85 2.83
4886 10943 2.024414 GGCTAGGGGCTATGTTTTGTG 58.976 52.381 0.00 0.00 41.46 3.33
4887 10944 1.405463 GCTAGGGGCTATGTTTTGTGC 59.595 52.381 0.00 0.00 38.06 4.57
4888 10945 2.945890 GCTAGGGGCTATGTTTTGTGCT 60.946 50.000 0.00 0.00 38.06 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
248 250 6.782494 TCCAGTATAGTTGCCTGATTCAGATA 59.218 38.462 15.36 1.31 32.44 1.98
273 277 2.189521 GGGTCGTCAATGGCCGAT 59.810 61.111 0.00 0.00 35.30 4.18
282 286 3.379445 GGAGCTTCGGGGTCGTCA 61.379 66.667 0.00 0.00 42.80 4.35
543 554 7.663081 TCAAAGAGCAATTATCCCAGTCATATC 59.337 37.037 0.00 0.00 0.00 1.63
564 575 9.715123 TGCGTACATATTCATAAATGTTCAAAG 57.285 29.630 0.00 0.00 37.50 2.77
709 1724 0.802607 GGTCGTGATCGGAGACTTGC 60.803 60.000 12.59 0.00 42.51 4.01
710 1725 0.811915 AGGTCGTGATCGGAGACTTG 59.188 55.000 12.59 0.00 42.51 3.16
711 1726 1.546961 AAGGTCGTGATCGGAGACTT 58.453 50.000 12.59 4.91 42.51 3.01
712 1727 2.015587 GTAAGGTCGTGATCGGAGACT 58.984 52.381 12.59 1.58 42.51 3.24
713 1728 1.065251 GGTAAGGTCGTGATCGGAGAC 59.935 57.143 6.51 6.51 42.51 3.36
714 1729 1.386533 GGTAAGGTCGTGATCGGAGA 58.613 55.000 0.00 0.00 45.75 3.71
715 1730 0.384669 GGGTAAGGTCGTGATCGGAG 59.615 60.000 0.00 0.00 37.69 4.63
716 1731 0.323633 TGGGTAAGGTCGTGATCGGA 60.324 55.000 0.00 0.00 37.69 4.55
717 1732 0.102481 CTGGGTAAGGTCGTGATCGG 59.898 60.000 0.00 0.00 37.69 4.18
718 1733 0.815734 ACTGGGTAAGGTCGTGATCG 59.184 55.000 0.00 0.00 38.55 3.69
719 1734 1.739371 GCACTGGGTAAGGTCGTGATC 60.739 57.143 0.00 0.00 0.00 2.92
720 1735 0.249398 GCACTGGGTAAGGTCGTGAT 59.751 55.000 0.00 0.00 0.00 3.06
721 1736 1.669440 GCACTGGGTAAGGTCGTGA 59.331 57.895 0.00 0.00 0.00 4.35
722 1737 1.375523 GGCACTGGGTAAGGTCGTG 60.376 63.158 0.00 0.00 0.00 4.35
723 1738 2.590114 GGGCACTGGGTAAGGTCGT 61.590 63.158 0.00 0.00 0.00 4.34
724 1739 2.267961 GGGCACTGGGTAAGGTCG 59.732 66.667 0.00 0.00 0.00 4.79
725 1740 1.002502 GTGGGCACTGGGTAAGGTC 60.003 63.158 0.00 0.00 0.00 3.85
726 1741 2.890766 CGTGGGCACTGGGTAAGGT 61.891 63.158 0.00 0.00 0.00 3.50
980 2569 4.537433 GCGGCACTGGCTCTAGGG 62.537 72.222 0.00 0.00 40.87 3.53
1103 2710 3.567579 ATGTGGAACTGGGCGGTGG 62.568 63.158 0.00 0.00 38.04 4.61
1554 3161 0.980231 AGATCAGCTCACCCCAGTCC 60.980 60.000 0.00 0.00 0.00 3.85
1663 3278 2.932614 CGAACACCTCTGGATGCTTTAG 59.067 50.000 0.00 0.00 0.00 1.85
1697 3312 0.457851 CCGAGCGAGTCTTTCCATCT 59.542 55.000 0.00 0.00 0.00 2.90
1737 3352 2.092882 GTTGTCGACTACCTGCGGC 61.093 63.158 17.81 0.00 0.00 6.53
1755 3370 2.080286 ACCGGATTCTTTCTGTCACG 57.920 50.000 9.46 0.00 0.00 4.35
1761 3376 3.790089 AACTCCAACCGGATTCTTTCT 57.210 42.857 9.46 0.00 41.79 2.52
1784 3399 4.259356 TCTCGTAATCTTCTTCGGTCTCA 58.741 43.478 0.00 0.00 0.00 3.27
1791 3406 5.688176 CCGGAAGAATCTCGTAATCTTCTTC 59.312 44.000 13.00 13.00 46.59 2.87
1833 3448 2.096248 GGTTTGGACAGGTTGTTGACA 58.904 47.619 0.00 0.00 0.00 3.58
1906 3521 1.379044 CAGCTTCATCCCCCACCAC 60.379 63.158 0.00 0.00 0.00 4.16
1928 3543 5.392595 GGTTGCTGTTGAACTTGAACAACTA 60.393 40.000 0.00 0.00 44.25 2.24
1931 3546 3.367910 GGGTTGCTGTTGAACTTGAACAA 60.368 43.478 0.00 0.00 33.01 2.83
1954 3569 1.379044 CAGCTTCATCCCCCACCAC 60.379 63.158 0.00 0.00 0.00 4.16
1995 3610 0.405198 TCTGCACCACCATGGATTGT 59.595 50.000 21.47 9.28 40.96 2.71
2026 3641 3.794475 GCATCATTATTCAGCACTGTGGC 60.794 47.826 10.21 2.10 0.00 5.01
2030 3645 4.042398 GCTTGCATCATTATTCAGCACTG 58.958 43.478 0.00 0.00 34.56 3.66
2163 3778 5.031066 TGTTACTGTTACAGGTCTGCTTT 57.969 39.130 17.21 0.00 35.51 3.51
2249 3864 2.233566 ACCAGGGCAGCTTCCATGA 61.234 57.895 18.90 0.00 40.11 3.07
2450 4065 1.070786 GGTTGGTTCTCCAGTCGCA 59.929 57.895 0.00 0.00 45.22 5.10
2511 4126 1.961394 AGTGTCTCGTTCAGCACCTTA 59.039 47.619 0.00 0.00 32.51 2.69
2532 4147 3.610040 TGTACGATGGTTTCTGCAGAT 57.390 42.857 19.04 0.85 0.00 2.90
2586 4203 4.722700 GCACCACCCCGCATCAGT 62.723 66.667 0.00 0.00 0.00 3.41
2631 4248 0.732880 ACATTCGAGCGTGAGAACCG 60.733 55.000 2.16 0.00 0.00 4.44
2673 4290 5.301551 ACGAGATGAGAGCAAATCTACATCT 59.698 40.000 0.00 0.00 45.49 2.90
2754 4428 2.630580 GGTTTTAGGGCAACACATCCAA 59.369 45.455 0.00 0.00 39.74 3.53
2860 4535 0.620556 GATCAGACCTGGAAAGCCCA 59.379 55.000 0.00 0.00 44.25 5.36
2864 4539 5.885449 AGATAAGGATCAGACCTGGAAAG 57.115 43.478 0.00 0.00 40.49 2.62
2921 4596 6.936335 ACATAAGCATCATCCGAATTGACATA 59.064 34.615 0.00 0.00 0.00 2.29
2928 4603 5.614308 TCAAGACATAAGCATCATCCGAAT 58.386 37.500 0.00 0.00 0.00 3.34
2953 4628 5.809562 CACAGTTCAGAGTAATCAGATGGTC 59.190 44.000 0.00 0.00 0.00 4.02
2957 4632 7.238486 ACTTCACAGTTCAGAGTAATCAGAT 57.762 36.000 0.00 0.00 0.00 2.90
2959 4634 8.465999 AGATACTTCACAGTTCAGAGTAATCAG 58.534 37.037 0.00 0.00 34.06 2.90
2966 4641 6.804677 AGCATAGATACTTCACAGTTCAGAG 58.195 40.000 0.00 0.00 34.06 3.35
3002 4677 7.574607 AGTAAATTTGGACAATAGGGAGTAGG 58.425 38.462 0.00 0.00 0.00 3.18
3060 4744 8.849168 ACCAAGATTGAATATCGCATCATAAAA 58.151 29.630 0.00 0.00 0.00 1.52
3156 5437 5.769662 TCAACAACAGAAATGCCATAGTTCT 59.230 36.000 0.00 0.00 43.96 3.01
3158 5439 6.265196 TCTTCAACAACAGAAATGCCATAGTT 59.735 34.615 0.00 0.00 0.00 2.24
3159 5440 5.769662 TCTTCAACAACAGAAATGCCATAGT 59.230 36.000 0.00 0.00 0.00 2.12
3160 5441 6.258230 TCTTCAACAACAGAAATGCCATAG 57.742 37.500 0.00 0.00 0.00 2.23
3234 5655 8.514330 AACTAACCACTTGAACAACAGAAATA 57.486 30.769 0.00 0.00 0.00 1.40
3244 5665 5.107065 CGAGATCCAAACTAACCACTTGAAC 60.107 44.000 0.00 0.00 0.00 3.18
3267 5688 9.650371 CAACAACATATAAACATATGGAAGACG 57.350 33.333 7.80 0.00 38.49 4.18
3268 5689 9.450807 GCAACAACATATAAACATATGGAAGAC 57.549 33.333 7.80 0.00 38.49 3.01
3289 5713 4.188462 CACCATATTACTTCTCCGCAACA 58.812 43.478 0.00 0.00 0.00 3.33
3383 5807 7.111136 ACCCCATACCCCTTTATAATAAAGG 57.889 40.000 0.04 0.04 44.90 3.11
3386 5810 9.652324 AGATTACCCCATACCCCTTTATAATAA 57.348 33.333 0.00 0.00 0.00 1.40
3387 5811 9.287818 GAGATTACCCCATACCCCTTTATAATA 57.712 37.037 0.00 0.00 0.00 0.98
3388 5812 7.746865 TGAGATTACCCCATACCCCTTTATAAT 59.253 37.037 0.00 0.00 0.00 1.28
3389 5813 7.090229 TGAGATTACCCCATACCCCTTTATAA 58.910 38.462 0.00 0.00 0.00 0.98
3392 5816 4.910515 TGAGATTACCCCATACCCCTTTA 58.089 43.478 0.00 0.00 0.00 1.85
3396 5820 1.351350 GCTGAGATTACCCCATACCCC 59.649 57.143 0.00 0.00 0.00 4.95
3397 5821 1.351350 GGCTGAGATTACCCCATACCC 59.649 57.143 0.00 0.00 0.00 3.69
3398 5822 2.054799 TGGCTGAGATTACCCCATACC 58.945 52.381 0.00 0.00 0.00 2.73
3400 5824 2.567169 CGATGGCTGAGATTACCCCATA 59.433 50.000 0.00 0.00 36.48 2.74
3401 5825 1.349026 CGATGGCTGAGATTACCCCAT 59.651 52.381 0.00 0.00 38.90 4.00
3402 5826 0.758734 CGATGGCTGAGATTACCCCA 59.241 55.000 0.00 0.00 0.00 4.96
3403 5827 1.048601 TCGATGGCTGAGATTACCCC 58.951 55.000 0.00 0.00 0.00 4.95
3404 5828 2.037772 ACATCGATGGCTGAGATTACCC 59.962 50.000 28.09 0.00 0.00 3.69
3405 5829 3.062763 CACATCGATGGCTGAGATTACC 58.937 50.000 28.09 0.00 0.00 2.85
3406 5830 3.722147 ACACATCGATGGCTGAGATTAC 58.278 45.455 28.09 0.00 0.00 1.89
3407 5831 4.406648 AACACATCGATGGCTGAGATTA 57.593 40.909 28.09 0.00 0.00 1.75
3408 5832 2.996249 ACACATCGATGGCTGAGATT 57.004 45.000 28.09 2.64 0.00 2.40
3409 5833 2.996249 AACACATCGATGGCTGAGAT 57.004 45.000 28.09 3.42 0.00 2.75
3410 5834 2.768253 AAACACATCGATGGCTGAGA 57.232 45.000 28.09 0.00 0.00 3.27
3411 5835 2.868583 CCTAAACACATCGATGGCTGAG 59.131 50.000 28.09 17.12 0.00 3.35
3412 5836 2.419990 CCCTAAACACATCGATGGCTGA 60.420 50.000 28.09 9.32 0.00 4.26
3413 5837 1.942657 CCCTAAACACATCGATGGCTG 59.057 52.381 28.09 20.11 0.00 4.85
3414 5838 1.837439 TCCCTAAACACATCGATGGCT 59.163 47.619 28.09 10.58 0.00 4.75
3415 5839 2.213499 CTCCCTAAACACATCGATGGC 58.787 52.381 28.09 0.00 0.00 4.40
3416 5840 2.170607 ACCTCCCTAAACACATCGATGG 59.829 50.000 28.09 18.89 0.00 3.51
3417 5841 3.198068 CACCTCCCTAAACACATCGATG 58.802 50.000 23.68 23.68 0.00 3.84
3418 5842 2.838202 ACACCTCCCTAAACACATCGAT 59.162 45.455 0.00 0.00 0.00 3.59
3419 5843 2.253610 ACACCTCCCTAAACACATCGA 58.746 47.619 0.00 0.00 0.00 3.59
3420 5844 2.762535 ACACCTCCCTAAACACATCG 57.237 50.000 0.00 0.00 0.00 3.84
3421 5845 3.930848 CGTTACACCTCCCTAAACACATC 59.069 47.826 0.00 0.00 0.00 3.06
3422 5846 3.579586 TCGTTACACCTCCCTAAACACAT 59.420 43.478 0.00 0.00 0.00 3.21
3423 5847 2.964464 TCGTTACACCTCCCTAAACACA 59.036 45.455 0.00 0.00 0.00 3.72
3424 5848 3.665745 TCGTTACACCTCCCTAAACAC 57.334 47.619 0.00 0.00 0.00 3.32
3425 5849 3.555586 GCTTCGTTACACCTCCCTAAACA 60.556 47.826 0.00 0.00 0.00 2.83
3426 5850 2.998670 GCTTCGTTACACCTCCCTAAAC 59.001 50.000 0.00 0.00 0.00 2.01
3427 5851 2.633967 TGCTTCGTTACACCTCCCTAAA 59.366 45.455 0.00 0.00 0.00 1.85
3428 5852 2.232941 CTGCTTCGTTACACCTCCCTAA 59.767 50.000 0.00 0.00 0.00 2.69
3429 5853 1.822990 CTGCTTCGTTACACCTCCCTA 59.177 52.381 0.00 0.00 0.00 3.53
3430 5854 0.608640 CTGCTTCGTTACACCTCCCT 59.391 55.000 0.00 0.00 0.00 4.20
3431 5855 0.606604 TCTGCTTCGTTACACCTCCC 59.393 55.000 0.00 0.00 0.00 4.30
3432 5856 2.288886 ACTTCTGCTTCGTTACACCTCC 60.289 50.000 0.00 0.00 0.00 4.30
3433 5857 2.731976 CACTTCTGCTTCGTTACACCTC 59.268 50.000 0.00 0.00 0.00 3.85
3434 5858 2.102588 ACACTTCTGCTTCGTTACACCT 59.897 45.455 0.00 0.00 0.00 4.00
3435 5859 2.480845 ACACTTCTGCTTCGTTACACC 58.519 47.619 0.00 0.00 0.00 4.16
3436 5860 4.505191 TGTTACACTTCTGCTTCGTTACAC 59.495 41.667 0.00 0.00 0.00 2.90
3437 5861 4.684877 TGTTACACTTCTGCTTCGTTACA 58.315 39.130 0.00 0.00 0.00 2.41
3438 5862 5.840940 ATGTTACACTTCTGCTTCGTTAC 57.159 39.130 0.00 0.00 0.00 2.50
3439 5863 6.854496 AAATGTTACACTTCTGCTTCGTTA 57.146 33.333 0.00 0.00 0.00 3.18
3440 5864 5.751243 AAATGTTACACTTCTGCTTCGTT 57.249 34.783 0.00 0.00 0.00 3.85
3441 5865 6.649141 TGATAAATGTTACACTTCTGCTTCGT 59.351 34.615 0.00 0.00 0.00 3.85
3442 5866 7.060600 TGATAAATGTTACACTTCTGCTTCG 57.939 36.000 0.00 0.00 0.00 3.79
3487 5938 8.693542 AGAAAGCATTTAGTCATTTACATTGC 57.306 30.769 0.00 0.00 39.27 3.56
3587 6080 7.313740 ACTAATTCATGATGAGCTACTCCAT 57.686 36.000 0.00 0.00 0.00 3.41
3625 6118 6.873605 GGGCATTAACTGACTGCTAAATTTTT 59.126 34.615 0.00 0.00 36.18 1.94
3713 6206 8.592105 TGATGAATGTCTTTTGGTTTTCATTC 57.408 30.769 0.00 0.00 40.47 2.67
3718 6211 8.369424 TGATGATGATGAATGTCTTTTGGTTTT 58.631 29.630 0.00 0.00 0.00 2.43
3744 6237 1.419387 GAGCCTACCTGCAAGATGGAT 59.581 52.381 0.00 0.00 34.07 3.41
3745 6238 0.833287 GAGCCTACCTGCAAGATGGA 59.167 55.000 0.00 0.00 34.07 3.41
3746 6239 0.179034 GGAGCCTACCTGCAAGATGG 60.179 60.000 0.00 0.00 34.07 3.51
3765 6258 7.308229 GCCATTCTTGATTGTTGCCTAGTATAG 60.308 40.741 0.00 0.00 38.80 1.31
3766 6259 6.486657 GCCATTCTTGATTGTTGCCTAGTATA 59.513 38.462 0.00 0.00 0.00 1.47
3767 6260 5.300286 GCCATTCTTGATTGTTGCCTAGTAT 59.700 40.000 0.00 0.00 0.00 2.12
3768 6261 4.640201 GCCATTCTTGATTGTTGCCTAGTA 59.360 41.667 0.00 0.00 0.00 1.82
3769 6262 3.445096 GCCATTCTTGATTGTTGCCTAGT 59.555 43.478 0.00 0.00 0.00 2.57
3770 6263 3.444742 TGCCATTCTTGATTGTTGCCTAG 59.555 43.478 0.00 0.00 0.00 3.02
3771 6264 3.193267 GTGCCATTCTTGATTGTTGCCTA 59.807 43.478 0.00 0.00 0.00 3.93
3772 6265 2.028748 GTGCCATTCTTGATTGTTGCCT 60.029 45.455 0.00 0.00 0.00 4.75
3773 6266 2.028748 AGTGCCATTCTTGATTGTTGCC 60.029 45.455 0.00 0.00 0.00 4.52
3774 6267 3.248266 GAGTGCCATTCTTGATTGTTGC 58.752 45.455 0.00 0.00 0.00 4.17
3775 6268 3.256383 TGGAGTGCCATTCTTGATTGTTG 59.744 43.478 0.00 0.00 39.92 3.33
3776 6269 3.499338 TGGAGTGCCATTCTTGATTGTT 58.501 40.909 0.00 0.00 39.92 2.83
3777 6270 3.159213 TGGAGTGCCATTCTTGATTGT 57.841 42.857 0.00 0.00 39.92 2.71
3789 6282 1.138661 CAAGAGAGGAGATGGAGTGCC 59.861 57.143 0.00 0.00 0.00 5.01
3790 6283 1.138661 CCAAGAGAGGAGATGGAGTGC 59.861 57.143 0.00 0.00 34.82 4.40
3791 6284 2.430332 GACCAAGAGAGGAGATGGAGTG 59.570 54.545 0.00 0.00 36.75 3.51
3792 6285 2.625617 GGACCAAGAGAGGAGATGGAGT 60.626 54.545 0.00 0.00 36.75 3.85
3803 6296 2.765250 GAAGCACGCGGACCAAGAGA 62.765 60.000 12.47 0.00 0.00 3.10
3807 6300 2.031919 ATGAAGCACGCGGACCAA 59.968 55.556 12.47 0.00 0.00 3.67
3826 6319 2.476619 CAGAAGCAACGACGAGAACAAT 59.523 45.455 0.00 0.00 0.00 2.71
3828 6321 1.487482 CAGAAGCAACGACGAGAACA 58.513 50.000 0.00 0.00 0.00 3.18
3850 6343 7.015292 AGGACACATATTACAATCATAGTCGGT 59.985 37.037 0.00 0.00 0.00 4.69
3861 6354 3.626222 GCCCCCAAGGACACATATTACAA 60.626 47.826 0.00 0.00 38.24 2.41
3866 6359 1.531748 CGCCCCCAAGGACACATAT 59.468 57.895 0.00 0.00 38.24 1.78
3872 6365 4.717313 GTCACCGCCCCCAAGGAC 62.717 72.222 0.00 0.00 38.24 3.85
3873 6366 4.974438 AGTCACCGCCCCCAAGGA 62.974 66.667 0.00 0.00 38.24 3.36
3874 6367 3.507377 AAAGTCACCGCCCCCAAGG 62.507 63.158 0.00 0.00 39.47 3.61
3875 6368 2.115266 AAAGTCACCGCCCCCAAG 59.885 61.111 0.00 0.00 0.00 3.61
3892 6385 0.826715 GAGCTCATCCCTGTAGTGCA 59.173 55.000 9.40 0.00 0.00 4.57
3898 6391 1.064906 CCAATGTGAGCTCATCCCTGT 60.065 52.381 21.47 0.00 0.00 4.00
3908 6401 4.929808 CGGTAGATATAACCCAATGTGAGC 59.070 45.833 1.96 0.00 33.10 4.26
3916 6409 4.736611 AGTCTCCGGTAGATATAACCCA 57.263 45.455 0.00 0.00 36.36 4.51
3936 6429 5.238214 GCATTCAAGACCAATAAGGCTCTAG 59.762 44.000 0.00 0.00 43.14 2.43
3937 6430 5.104360 AGCATTCAAGACCAATAAGGCTCTA 60.104 40.000 0.00 0.00 43.14 2.43
3981 6474 3.071479 GGGAGAACATGTTGCTTCGTTA 58.929 45.455 17.58 0.00 0.00 3.18
4000 6493 2.503895 AGAGAAATGTGAAGCAGGGG 57.496 50.000 0.00 0.00 0.00 4.79
4021 6514 8.565896 TGGCATCTTCATGTATTATATGGAAC 57.434 34.615 0.00 0.00 31.86 3.62
4069 6562 1.348938 CGACACGTGTCCGCAAAAA 59.651 52.632 36.01 0.00 41.86 1.94
4070 6563 3.007516 CGACACGTGTCCGCAAAA 58.992 55.556 36.01 0.00 41.86 2.44
4071 6564 3.632107 GCGACACGTGTCCGCAAA 61.632 61.111 37.04 0.00 41.86 3.68
4072 6565 4.578898 AGCGACACGTGTCCGCAA 62.579 61.111 39.77 0.00 42.54 4.85
4073 6566 4.994201 GAGCGACACGTGTCCGCA 62.994 66.667 39.77 0.00 42.54 5.69
4074 6567 4.994201 TGAGCGACACGTGTCCGC 62.994 66.667 36.14 36.14 41.86 5.54
4075 6568 2.726850 TTCTGAGCGACACGTGTCCG 62.727 60.000 36.01 30.34 41.86 4.79
4076 6569 0.388649 ATTCTGAGCGACACGTGTCC 60.389 55.000 36.01 28.54 41.86 4.02
4077 6570 0.710567 CATTCTGAGCGACACGTGTC 59.289 55.000 33.76 33.76 41.47 3.67
4078 6571 0.032130 ACATTCTGAGCGACACGTGT 59.968 50.000 23.64 23.64 0.00 4.49
4079 6572 0.436150 CACATTCTGAGCGACACGTG 59.564 55.000 15.48 15.48 0.00 4.49
4080 6573 0.313987 TCACATTCTGAGCGACACGT 59.686 50.000 0.00 0.00 0.00 4.49
4081 6574 1.633561 ATCACATTCTGAGCGACACG 58.366 50.000 0.00 0.00 30.20 4.49
4082 6575 3.648179 GAATCACATTCTGAGCGACAC 57.352 47.619 0.00 0.00 36.37 3.67
4101 6594 4.002256 TCCTATTACATGTCCCACCAGA 57.998 45.455 0.00 0.00 0.00 3.86
4125 6619 5.940470 ACCAGACAAGAACAAATCTACATCC 59.060 40.000 0.00 0.00 37.42 3.51
4126 6620 7.440523 AACCAGACAAGAACAAATCTACATC 57.559 36.000 0.00 0.00 37.42 3.06
4127 6621 7.119846 GCTAACCAGACAAGAACAAATCTACAT 59.880 37.037 0.00 0.00 37.42 2.29
4128 6622 6.426937 GCTAACCAGACAAGAACAAATCTACA 59.573 38.462 0.00 0.00 37.42 2.74
4178 6680 2.191400 ACCATGAGCTACAGACCACAT 58.809 47.619 0.00 0.00 0.00 3.21
4179 6681 1.644509 ACCATGAGCTACAGACCACA 58.355 50.000 0.00 0.00 0.00 4.17
4180 6682 2.350522 CAACCATGAGCTACAGACCAC 58.649 52.381 0.00 0.00 0.00 4.16
4188 6690 0.107508 GCAGAGCCAACCATGAGCTA 60.108 55.000 0.00 0.00 34.52 3.32
4191 6693 0.322277 ACAGCAGAGCCAACCATGAG 60.322 55.000 0.00 0.00 0.00 2.90
4194 6696 1.630369 TCTAACAGCAGAGCCAACCAT 59.370 47.619 0.00 0.00 0.00 3.55
4196 6701 2.185004 TTCTAACAGCAGAGCCAACC 57.815 50.000 0.00 0.00 0.00 3.77
4199 6704 4.022068 CCAATTTTTCTAACAGCAGAGCCA 60.022 41.667 0.00 0.00 0.00 4.75
4200 6705 4.218417 TCCAATTTTTCTAACAGCAGAGCC 59.782 41.667 0.00 0.00 0.00 4.70
4201 6706 5.376854 TCCAATTTTTCTAACAGCAGAGC 57.623 39.130 0.00 0.00 0.00 4.09
4202 6707 5.803967 GCATCCAATTTTTCTAACAGCAGAG 59.196 40.000 0.00 0.00 0.00 3.35
4203 6708 5.477984 AGCATCCAATTTTTCTAACAGCAGA 59.522 36.000 0.00 0.00 0.00 4.26
4204 6709 5.717119 AGCATCCAATTTTTCTAACAGCAG 58.283 37.500 0.00 0.00 0.00 4.24
4205 6710 5.726980 AGCATCCAATTTTTCTAACAGCA 57.273 34.783 0.00 0.00 0.00 4.41
4206 6711 5.349543 CCAAGCATCCAATTTTTCTAACAGC 59.650 40.000 0.00 0.00 0.00 4.40
4207 6712 6.458210 ACCAAGCATCCAATTTTTCTAACAG 58.542 36.000 0.00 0.00 0.00 3.16
4211 6716 6.662865 TGAACCAAGCATCCAATTTTTCTA 57.337 33.333 0.00 0.00 0.00 2.10
4218 6723 5.484715 CAAAAGATGAACCAAGCATCCAAT 58.515 37.500 0.00 0.00 42.36 3.16
4234 6739 1.895131 ACGGCAAAGCATCCAAAAGAT 59.105 42.857 0.00 0.00 34.66 2.40
4285 6790 8.161699 ACATCCAACACGTAAAACTTCTATTT 57.838 30.769 0.00 0.00 0.00 1.40
4288 6793 7.556733 AAACATCCAACACGTAAAACTTCTA 57.443 32.000 0.00 0.00 0.00 2.10
4290 6795 8.687301 CATAAAACATCCAACACGTAAAACTTC 58.313 33.333 0.00 0.00 0.00 3.01
4294 6800 7.040473 ACCATAAAACATCCAACACGTAAAA 57.960 32.000 0.00 0.00 0.00 1.52
4299 6805 5.768317 AGAAACCATAAAACATCCAACACG 58.232 37.500 0.00 0.00 0.00 4.49
4300 6806 6.423604 CCAAGAAACCATAAAACATCCAACAC 59.576 38.462 0.00 0.00 0.00 3.32
4316 6822 1.971695 CCCGAGCACCCAAGAAACC 60.972 63.158 0.00 0.00 0.00 3.27
4333 6856 3.941704 AAGGATCAGACCTGGAAATCC 57.058 47.619 0.00 6.97 40.49 3.01
4352 6875 8.669055 TGGTACTAATAAGAGAAACCAGGTAA 57.331 34.615 0.00 0.00 33.78 2.85
4353 6876 8.302515 CTGGTACTAATAAGAGAAACCAGGTA 57.697 38.462 10.12 0.00 43.21 3.08
4356 6879 7.093465 TGACCTGGTACTAATAAGAGAAACCAG 60.093 40.741 10.87 10.87 44.69 4.00
4357 6880 6.727231 TGACCTGGTACTAATAAGAGAAACCA 59.273 38.462 0.00 0.00 35.84 3.67
4358 6881 7.179076 TGACCTGGTACTAATAAGAGAAACC 57.821 40.000 0.00 0.00 0.00 3.27
4359 6882 9.668497 AAATGACCTGGTACTAATAAGAGAAAC 57.332 33.333 0.00 0.00 0.00 2.78
4386 6909 8.673711 GTGCAAGACAATCATAAGTACCATAAA 58.326 33.333 0.00 0.00 0.00 1.40
4387 6910 7.826744 TGTGCAAGACAATCATAAGTACCATAA 59.173 33.333 0.00 0.00 0.00 1.90
4388 6911 7.334858 TGTGCAAGACAATCATAAGTACCATA 58.665 34.615 0.00 0.00 0.00 2.74
4440 7108 8.621532 ATGTTCAGTAGAAAAGCAATAACAGA 57.378 30.769 0.00 0.00 35.08 3.41
4443 7111 7.121315 AGGGATGTTCAGTAGAAAAGCAATAAC 59.879 37.037 0.00 0.00 35.08 1.89
4448 7116 4.326826 CAGGGATGTTCAGTAGAAAAGCA 58.673 43.478 0.00 0.00 35.08 3.91
4458 7126 0.325933 TGGACAGCAGGGATGTTCAG 59.674 55.000 0.00 0.00 32.11 3.02
4501 10487 0.822164 AAGAGCATGCCCAAGATTGC 59.178 50.000 15.66 0.00 35.34 3.56
4567 10590 6.985188 AGATTTTTAGACGCAAAGCATCTA 57.015 33.333 0.00 0.00 32.05 1.98
4590 10613 6.381498 TTGTTTGGTACCTCATTCATCCTA 57.619 37.500 14.36 0.00 0.00 2.94
4597 10620 3.763897 GCCAGATTGTTTGGTACCTCATT 59.236 43.478 14.36 6.46 38.02 2.57
4606 10629 4.049546 CACCATATGCCAGATTGTTTGG 57.950 45.455 0.00 0.00 38.78 3.28
4627 10650 2.111756 CACTTTCAACTCAAGCGTTGC 58.888 47.619 0.00 0.00 42.98 4.17
4631 10654 4.530094 TTGTACACTTTCAACTCAAGCG 57.470 40.909 0.00 0.00 0.00 4.68
4657 10714 8.160765 TCCGGCTAATTTGATGATTAATTCCTA 58.839 33.333 0.00 0.00 0.00 2.94
4687 10744 8.745590 AGATTTGCGTACATAAAGGGTAAAAAT 58.254 29.630 0.00 0.00 0.00 1.82
4688 10745 8.113173 AGATTTGCGTACATAAAGGGTAAAAA 57.887 30.769 0.00 0.00 0.00 1.94
4689 10746 7.608761 AGAGATTTGCGTACATAAAGGGTAAAA 59.391 33.333 0.00 0.00 0.00 1.52
4690 10747 7.107542 AGAGATTTGCGTACATAAAGGGTAAA 58.892 34.615 0.00 0.00 0.00 2.01
4691 10748 6.646267 AGAGATTTGCGTACATAAAGGGTAA 58.354 36.000 0.00 0.00 0.00 2.85
4692 10749 6.229936 AGAGATTTGCGTACATAAAGGGTA 57.770 37.500 0.00 0.00 0.00 3.69
4693 10750 5.099042 AGAGATTTGCGTACATAAAGGGT 57.901 39.130 0.00 0.00 0.00 4.34
4694 10751 6.128007 ACAAAGAGATTTGCGTACATAAAGGG 60.128 38.462 0.79 0.00 35.42 3.95
4695 10752 6.742718 CACAAAGAGATTTGCGTACATAAAGG 59.257 38.462 0.79 0.00 35.42 3.11
4696 10753 7.298122 ACACAAAGAGATTTGCGTACATAAAG 58.702 34.615 0.79 0.00 35.42 1.85
4697 10754 7.197071 ACACAAAGAGATTTGCGTACATAAA 57.803 32.000 0.79 0.00 35.42 1.40
4698 10755 6.795098 ACACAAAGAGATTTGCGTACATAA 57.205 33.333 0.79 0.00 35.42 1.90
4699 10756 6.649141 AGAACACAAAGAGATTTGCGTACATA 59.351 34.615 0.79 0.00 35.42 2.29
4700 10757 5.470098 AGAACACAAAGAGATTTGCGTACAT 59.530 36.000 0.79 0.00 35.42 2.29
4701 10758 4.814234 AGAACACAAAGAGATTTGCGTACA 59.186 37.500 0.79 0.00 35.42 2.90
4702 10759 5.344207 AGAACACAAAGAGATTTGCGTAC 57.656 39.130 0.79 0.00 35.42 3.67
4703 10760 5.120208 GCTAGAACACAAAGAGATTTGCGTA 59.880 40.000 0.00 0.00 35.42 4.42
4704 10761 4.083802 GCTAGAACACAAAGAGATTTGCGT 60.084 41.667 0.00 0.00 35.42 5.24
4705 10762 4.083855 TGCTAGAACACAAAGAGATTTGCG 60.084 41.667 0.00 0.00 35.42 4.85
4706 10763 5.049129 ACTGCTAGAACACAAAGAGATTTGC 60.049 40.000 0.00 0.00 35.42 3.68
4707 10764 6.203530 TCACTGCTAGAACACAAAGAGATTTG 59.796 38.462 0.00 0.00 37.89 2.32
4708 10765 6.291377 TCACTGCTAGAACACAAAGAGATTT 58.709 36.000 0.00 0.00 0.00 2.17
4709 10766 5.858381 TCACTGCTAGAACACAAAGAGATT 58.142 37.500 0.00 0.00 0.00 2.40
4710 10767 5.474578 TCACTGCTAGAACACAAAGAGAT 57.525 39.130 0.00 0.00 0.00 2.75
4711 10768 4.937201 TCACTGCTAGAACACAAAGAGA 57.063 40.909 0.00 0.00 0.00 3.10
4712 10769 5.335827 GTTCACTGCTAGAACACAAAGAG 57.664 43.478 0.00 0.00 43.64 2.85
4720 10777 5.163814 GGATTGATGTGTTCACTGCTAGAAC 60.164 44.000 0.00 8.80 44.26 3.01
4721 10778 4.937620 GGATTGATGTGTTCACTGCTAGAA 59.062 41.667 0.00 0.00 32.84 2.10
4722 10779 4.020307 TGGATTGATGTGTTCACTGCTAGA 60.020 41.667 0.00 0.00 32.84 2.43
4723 10780 4.093998 GTGGATTGATGTGTTCACTGCTAG 59.906 45.833 4.59 0.00 32.84 3.42
4724 10781 4.002982 GTGGATTGATGTGTTCACTGCTA 58.997 43.478 4.59 0.00 32.84 3.49
4725 10782 2.816087 GTGGATTGATGTGTTCACTGCT 59.184 45.455 4.59 0.00 32.84 4.24
4726 10783 2.816087 AGTGGATTGATGTGTTCACTGC 59.184 45.455 4.59 0.00 34.65 4.40
4727 10784 3.438087 GGAGTGGATTGATGTGTTCACTG 59.562 47.826 0.00 0.00 35.87 3.66
4728 10785 3.560025 GGGAGTGGATTGATGTGTTCACT 60.560 47.826 4.59 0.00 38.05 3.41
4729 10786 2.749621 GGGAGTGGATTGATGTGTTCAC 59.250 50.000 0.00 0.00 32.84 3.18
4730 10787 2.644299 AGGGAGTGGATTGATGTGTTCA 59.356 45.455 0.00 0.00 0.00 3.18
4731 10788 3.356529 AGGGAGTGGATTGATGTGTTC 57.643 47.619 0.00 0.00 0.00 3.18
4732 10789 4.927267 TTAGGGAGTGGATTGATGTGTT 57.073 40.909 0.00 0.00 0.00 3.32
4733 10790 4.474651 TCATTAGGGAGTGGATTGATGTGT 59.525 41.667 0.00 0.00 0.00 3.72
4734 10791 5.039920 TCATTAGGGAGTGGATTGATGTG 57.960 43.478 0.00 0.00 0.00 3.21
4735 10792 4.445448 GCTCATTAGGGAGTGGATTGATGT 60.445 45.833 0.00 0.00 37.24 3.06
4736 10793 4.070716 GCTCATTAGGGAGTGGATTGATG 58.929 47.826 0.00 0.00 37.24 3.07
4737 10794 3.718434 TGCTCATTAGGGAGTGGATTGAT 59.282 43.478 0.00 0.00 37.24 2.57
4738 10795 3.114606 TGCTCATTAGGGAGTGGATTGA 58.885 45.455 0.00 0.00 37.24 2.57
4739 10796 3.135348 TCTGCTCATTAGGGAGTGGATTG 59.865 47.826 0.00 0.00 37.24 2.67
4740 10797 3.387962 TCTGCTCATTAGGGAGTGGATT 58.612 45.455 0.00 0.00 37.24 3.01
4741 10798 3.051940 TCTGCTCATTAGGGAGTGGAT 57.948 47.619 0.00 0.00 37.24 3.41
4742 10799 2.550277 TCTGCTCATTAGGGAGTGGA 57.450 50.000 0.00 0.00 37.24 4.02
4743 10800 3.853355 AATCTGCTCATTAGGGAGTGG 57.147 47.619 0.00 0.00 37.24 4.00
4744 10801 4.774124 TCAAATCTGCTCATTAGGGAGTG 58.226 43.478 0.00 0.00 37.24 3.51
4745 10802 4.472833 ACTCAAATCTGCTCATTAGGGAGT 59.527 41.667 0.00 0.00 37.24 3.85
4746 10803 5.033589 ACTCAAATCTGCTCATTAGGGAG 57.966 43.478 0.00 0.00 37.97 4.30
4747 10804 4.141620 GGACTCAAATCTGCTCATTAGGGA 60.142 45.833 0.00 0.00 0.00 4.20
4748 10805 4.133078 GGACTCAAATCTGCTCATTAGGG 58.867 47.826 0.00 0.00 0.00 3.53
4749 10806 5.033589 AGGACTCAAATCTGCTCATTAGG 57.966 43.478 0.00 0.00 0.00 2.69
4750 10807 5.916318 AGAGGACTCAAATCTGCTCATTAG 58.084 41.667 1.75 0.00 0.00 1.73
4751 10808 5.660417 AGAGAGGACTCAAATCTGCTCATTA 59.340 40.000 1.75 0.00 44.79 1.90
4752 10809 4.470664 AGAGAGGACTCAAATCTGCTCATT 59.529 41.667 1.75 0.00 44.79 2.57
4753 10810 4.032310 AGAGAGGACTCAAATCTGCTCAT 58.968 43.478 1.75 0.00 44.79 2.90
4754 10811 3.439154 AGAGAGGACTCAAATCTGCTCA 58.561 45.455 1.75 0.00 44.79 4.26
4755 10812 5.348164 GTTAGAGAGGACTCAAATCTGCTC 58.652 45.833 1.75 0.00 44.79 4.26
4756 10813 4.161377 GGTTAGAGAGGACTCAAATCTGCT 59.839 45.833 1.75 0.00 44.79 4.24
4757 10814 4.438148 GGTTAGAGAGGACTCAAATCTGC 58.562 47.826 1.75 0.00 44.79 4.26
4758 10815 4.467795 TGGGTTAGAGAGGACTCAAATCTG 59.532 45.833 1.75 0.00 44.79 2.90
4759 10816 4.468153 GTGGGTTAGAGAGGACTCAAATCT 59.532 45.833 1.75 0.00 44.79 2.40
4760 10817 4.383226 GGTGGGTTAGAGAGGACTCAAATC 60.383 50.000 1.75 0.00 44.79 2.17
4761 10818 3.519913 GGTGGGTTAGAGAGGACTCAAAT 59.480 47.826 1.75 0.00 44.79 2.32
4762 10819 2.904434 GGTGGGTTAGAGAGGACTCAAA 59.096 50.000 1.75 0.00 44.79 2.69
4763 10820 2.158219 TGGTGGGTTAGAGAGGACTCAA 60.158 50.000 1.75 0.00 44.79 3.02
4764 10821 1.431633 TGGTGGGTTAGAGAGGACTCA 59.568 52.381 1.75 0.00 44.79 3.41
4765 10822 1.826096 GTGGTGGGTTAGAGAGGACTC 59.174 57.143 0.00 0.00 42.90 3.36
4766 10823 1.891450 CGTGGTGGGTTAGAGAGGACT 60.891 57.143 0.00 0.00 0.00 3.85
4767 10824 0.531200 CGTGGTGGGTTAGAGAGGAC 59.469 60.000 0.00 0.00 0.00 3.85
4768 10825 0.613853 CCGTGGTGGGTTAGAGAGGA 60.614 60.000 0.00 0.00 0.00 3.71
4769 10826 1.898154 CCGTGGTGGGTTAGAGAGG 59.102 63.158 0.00 0.00 0.00 3.69
4770 10827 1.218316 GCCGTGGTGGGTTAGAGAG 59.782 63.158 0.00 0.00 38.63 3.20
4771 10828 3.384348 GCCGTGGTGGGTTAGAGA 58.616 61.111 0.00 0.00 38.63 3.10
4797 10854 9.820229 CGTCAGCTTGATTTTAGTGTTTAATTA 57.180 29.630 0.00 0.00 0.00 1.40
4798 10855 8.564574 TCGTCAGCTTGATTTTAGTGTTTAATT 58.435 29.630 0.00 0.00 0.00 1.40
4799 10856 8.094798 TCGTCAGCTTGATTTTAGTGTTTAAT 57.905 30.769 0.00 0.00 0.00 1.40
4800 10857 7.439955 TCTCGTCAGCTTGATTTTAGTGTTTAA 59.560 33.333 0.00 0.00 0.00 1.52
4801 10858 6.926826 TCTCGTCAGCTTGATTTTAGTGTTTA 59.073 34.615 0.00 0.00 0.00 2.01
4802 10859 5.758296 TCTCGTCAGCTTGATTTTAGTGTTT 59.242 36.000 0.00 0.00 0.00 2.83
4803 10860 5.177696 GTCTCGTCAGCTTGATTTTAGTGTT 59.822 40.000 0.00 0.00 0.00 3.32
4804 10861 4.686554 GTCTCGTCAGCTTGATTTTAGTGT 59.313 41.667 0.00 0.00 0.00 3.55
4805 10862 4.926238 AGTCTCGTCAGCTTGATTTTAGTG 59.074 41.667 0.00 0.00 0.00 2.74
4806 10863 4.926238 CAGTCTCGTCAGCTTGATTTTAGT 59.074 41.667 0.00 0.00 0.00 2.24
4807 10864 4.328440 CCAGTCTCGTCAGCTTGATTTTAG 59.672 45.833 0.00 0.00 0.00 1.85
4808 10865 4.245660 CCAGTCTCGTCAGCTTGATTTTA 58.754 43.478 0.00 0.00 0.00 1.52
4809 10866 3.070018 CCAGTCTCGTCAGCTTGATTTT 58.930 45.455 0.00 0.00 0.00 1.82
4810 10867 2.037772 ACCAGTCTCGTCAGCTTGATTT 59.962 45.455 0.00 0.00 0.00 2.17
4811 10868 1.620819 ACCAGTCTCGTCAGCTTGATT 59.379 47.619 0.00 0.00 0.00 2.57
4812 10869 1.261480 ACCAGTCTCGTCAGCTTGAT 58.739 50.000 0.00 0.00 0.00 2.57
4813 10870 1.813178 CTACCAGTCTCGTCAGCTTGA 59.187 52.381 0.00 0.00 0.00 3.02
4814 10871 1.542030 ACTACCAGTCTCGTCAGCTTG 59.458 52.381 0.00 0.00 0.00 4.01
4815 10872 1.813786 GACTACCAGTCTCGTCAGCTT 59.186 52.381 0.00 0.00 41.88 3.74
4816 10873 1.455248 GACTACCAGTCTCGTCAGCT 58.545 55.000 0.00 0.00 41.88 4.24
4817 10874 0.097325 CGACTACCAGTCTCGTCAGC 59.903 60.000 4.91 0.00 42.92 4.26
4818 10875 1.723220 TCGACTACCAGTCTCGTCAG 58.277 55.000 4.91 0.00 42.92 3.51
4819 10876 2.277969 GATCGACTACCAGTCTCGTCA 58.722 52.381 4.91 0.00 42.92 4.35
4820 10877 1.598601 GGATCGACTACCAGTCTCGTC 59.401 57.143 4.91 0.86 42.92 4.20
4821 10878 1.666054 GGATCGACTACCAGTCTCGT 58.334 55.000 4.91 0.00 42.92 4.18
4822 10879 0.945813 GGGATCGACTACCAGTCTCG 59.054 60.000 4.91 0.00 42.92 4.04
4823 10880 0.945813 CGGGATCGACTACCAGTCTC 59.054 60.000 4.91 0.00 42.92 3.36
4824 10881 0.255318 ACGGGATCGACTACCAGTCT 59.745 55.000 4.91 0.00 42.92 3.24
4825 10882 0.381089 CACGGGATCGACTACCAGTC 59.619 60.000 7.64 0.00 41.71 3.51
4826 10883 0.034767 TCACGGGATCGACTACCAGT 60.035 55.000 7.30 6.34 40.11 4.00
4827 10884 0.381089 GTCACGGGATCGACTACCAG 59.619 60.000 0.00 5.80 40.11 4.00
4828 10885 1.371337 CGTCACGGGATCGACTACCA 61.371 60.000 0.00 0.00 40.11 3.25
4829 10886 1.354506 CGTCACGGGATCGACTACC 59.645 63.158 0.00 0.00 40.11 3.18
4830 10887 1.298190 GCGTCACGGGATCGACTAC 60.298 63.158 12.74 0.00 40.11 2.73
4831 10888 1.450848 AGCGTCACGGGATCGACTA 60.451 57.895 12.74 0.00 40.11 2.59
4832 10889 2.750637 AGCGTCACGGGATCGACT 60.751 61.111 12.74 7.13 40.11 4.18
4833 10890 2.537792 TTCAGCGTCACGGGATCGAC 62.538 60.000 12.74 5.30 40.11 4.20
4834 10891 1.868987 TTTCAGCGTCACGGGATCGA 61.869 55.000 12.74 0.00 40.11 3.59
4835 10892 1.413767 CTTTCAGCGTCACGGGATCG 61.414 60.000 0.00 0.00 43.02 3.69
4836 10893 1.696832 GCTTTCAGCGTCACGGGATC 61.697 60.000 0.00 0.00 0.00 3.36
4837 10894 1.741770 GCTTTCAGCGTCACGGGAT 60.742 57.895 0.00 0.00 0.00 3.85
4838 10895 2.357034 GCTTTCAGCGTCACGGGA 60.357 61.111 0.00 0.00 0.00 5.14
4839 10896 2.664851 TGCTTTCAGCGTCACGGG 60.665 61.111 0.00 0.00 46.26 5.28
4840 10897 1.498865 AAGTGCTTTCAGCGTCACGG 61.499 55.000 0.00 0.00 46.26 4.94
4841 10898 0.111089 GAAGTGCTTTCAGCGTCACG 60.111 55.000 0.00 0.00 46.26 4.35
4842 10899 0.235926 GGAAGTGCTTTCAGCGTCAC 59.764 55.000 4.36 0.00 46.26 3.67
4843 10900 0.179059 TGGAAGTGCTTTCAGCGTCA 60.179 50.000 4.36 0.00 46.26 4.35
4844 10901 0.235926 GTGGAAGTGCTTTCAGCGTC 59.764 55.000 0.00 0.00 46.26 5.19
4845 10902 0.463654 TGTGGAAGTGCTTTCAGCGT 60.464 50.000 0.00 0.00 46.26 5.07
4846 10903 0.662619 TTGTGGAAGTGCTTTCAGCG 59.337 50.000 0.00 0.00 46.26 5.18
4847 10904 1.000938 CCTTGTGGAAGTGCTTTCAGC 60.001 52.381 0.00 0.00 37.54 4.26
4848 10905 1.000938 GCCTTGTGGAAGTGCTTTCAG 60.001 52.381 0.00 0.00 37.54 3.02
4849 10906 1.032014 GCCTTGTGGAAGTGCTTTCA 58.968 50.000 4.36 0.00 37.54 2.69
4850 10907 1.322442 AGCCTTGTGGAAGTGCTTTC 58.678 50.000 0.00 0.00 34.10 2.62
4851 10908 2.508526 CTAGCCTTGTGGAAGTGCTTT 58.491 47.619 0.00 0.00 37.13 3.51
4852 10909 1.271597 CCTAGCCTTGTGGAAGTGCTT 60.272 52.381 0.00 0.00 37.13 3.91
4853 10910 0.326264 CCTAGCCTTGTGGAAGTGCT 59.674 55.000 0.00 0.00 38.50 4.40
4854 10911 0.678048 CCCTAGCCTTGTGGAAGTGC 60.678 60.000 0.00 0.00 34.57 4.40
4855 10912 0.035056 CCCCTAGCCTTGTGGAAGTG 60.035 60.000 0.00 0.00 34.57 3.16
4856 10913 1.853250 GCCCCTAGCCTTGTGGAAGT 61.853 60.000 0.00 0.00 34.35 3.01
4857 10914 1.077429 GCCCCTAGCCTTGTGGAAG 60.077 63.158 0.00 0.00 34.35 3.46
4858 10915 0.252974 TAGCCCCTAGCCTTGTGGAA 60.253 55.000 0.00 0.00 45.47 3.53
4859 10916 0.030092 ATAGCCCCTAGCCTTGTGGA 60.030 55.000 0.00 0.00 45.47 4.02
4860 10917 0.109342 CATAGCCCCTAGCCTTGTGG 59.891 60.000 0.00 0.00 45.47 4.17
4861 10918 0.839946 ACATAGCCCCTAGCCTTGTG 59.160 55.000 0.00 0.00 45.47 3.33
4862 10919 1.596496 AACATAGCCCCTAGCCTTGT 58.404 50.000 0.00 0.00 45.47 3.16
4863 10920 2.689983 CAAAACATAGCCCCTAGCCTTG 59.310 50.000 0.00 0.00 45.47 3.61
4864 10921 2.311841 ACAAAACATAGCCCCTAGCCTT 59.688 45.455 0.00 0.00 45.47 4.35
4865 10922 1.923148 ACAAAACATAGCCCCTAGCCT 59.077 47.619 0.00 0.00 45.47 4.58
4866 10923 2.024414 CACAAAACATAGCCCCTAGCC 58.976 52.381 0.00 0.00 45.47 3.93
4867 10924 1.405463 GCACAAAACATAGCCCCTAGC 59.595 52.381 0.00 0.00 44.25 3.42
4868 10925 3.004752 AGCACAAAACATAGCCCCTAG 57.995 47.619 0.00 0.00 0.00 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.