Multiple sequence alignment - TraesCS7B01G407000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G407000 chr7B 100.000 3180 0 0 1 3180 675995197 675998376 0.000000e+00 5873
1 TraesCS7B01G407000 chr7B 84.126 1178 144 27 1421 2587 677073055 677074200 0.000000e+00 1099
2 TraesCS7B01G407000 chr7D 95.841 2092 46 15 594 2680 597342604 597344659 0.000000e+00 3343
3 TraesCS7B01G407000 chr7D 82.824 1310 166 23 1323 2618 597475335 597474071 0.000000e+00 1118
4 TraesCS7B01G407000 chr7D 84.490 1167 142 18 1431 2587 598027909 598026772 0.000000e+00 1116
5 TraesCS7B01G407000 chr7D 91.632 239 11 5 1 237 597342330 597342561 3.960000e-84 322
6 TraesCS7B01G407000 chr7D 96.273 161 5 1 2887 3047 597344909 597345068 2.430000e-66 263
7 TraesCS7B01G407000 chr7D 99.281 139 1 0 2751 2889 597344660 597344798 5.270000e-63 252
8 TraesCS7B01G407000 chr7D 90.845 142 2 1 3039 3180 597380787 597380917 2.520000e-41 180
9 TraesCS7B01G407000 chr2B 85.855 1018 130 13 1285 2299 765392045 765393051 0.000000e+00 1070
10 TraesCS7B01G407000 chr2B 83.658 257 33 6 896 1151 765391318 765391566 1.910000e-57 233
11 TraesCS7B01G407000 chr5B 79.879 1327 184 36 1409 2689 591816439 591817728 0.000000e+00 894
12 TraesCS7B01G407000 chr5B 82.619 840 116 13 1758 2592 591648054 591648868 0.000000e+00 715
13 TraesCS7B01G407000 chr5B 83.778 450 65 4 1322 1771 591647594 591648035 1.360000e-113 420
14 TraesCS7B01G407000 chr5B 82.955 176 22 4 998 1165 591814359 591814534 5.490000e-33 152
15 TraesCS7B01G407000 chr5D 81.470 939 130 23 1758 2681 482563352 482564261 0.000000e+00 730
16 TraesCS7B01G407000 chr5D 82.857 840 114 13 1758 2592 482293201 482294015 0.000000e+00 726
17 TraesCS7B01G407000 chr5D 84.000 450 64 3 1322 1771 482292740 482293181 2.930000e-115 425
18 TraesCS7B01G407000 chr5D 73.136 845 185 32 1484 2297 550923389 550924222 6.760000e-67 265
19 TraesCS7B01G407000 chr5D 83.333 162 19 4 1012 1165 482562395 482562556 3.310000e-30 143
20 TraesCS7B01G407000 chr5A 82.346 844 112 19 1758 2592 601993732 601994547 0.000000e+00 699
21 TraesCS7B01G407000 chr5A 83.111 450 68 4 1322 1771 601993271 601993712 1.370000e-108 403


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G407000 chr7B 675995197 675998376 3179 False 5873.0 5873 100.00000 1 3180 1 chr7B.!!$F1 3179
1 TraesCS7B01G407000 chr7B 677073055 677074200 1145 False 1099.0 1099 84.12600 1421 2587 1 chr7B.!!$F2 1166
2 TraesCS7B01G407000 chr7D 597474071 597475335 1264 True 1118.0 1118 82.82400 1323 2618 1 chr7D.!!$R1 1295
3 TraesCS7B01G407000 chr7D 598026772 598027909 1137 True 1116.0 1116 84.49000 1431 2587 1 chr7D.!!$R2 1156
4 TraesCS7B01G407000 chr7D 597342330 597345068 2738 False 1045.0 3343 95.75675 1 3047 4 chr7D.!!$F2 3046
5 TraesCS7B01G407000 chr2B 765391318 765393051 1733 False 651.5 1070 84.75650 896 2299 2 chr2B.!!$F1 1403
6 TraesCS7B01G407000 chr5B 591647594 591648868 1274 False 567.5 715 83.19850 1322 2592 2 chr5B.!!$F1 1270
7 TraesCS7B01G407000 chr5B 591814359 591817728 3369 False 523.0 894 81.41700 998 2689 2 chr5B.!!$F2 1691
8 TraesCS7B01G407000 chr5D 482292740 482294015 1275 False 575.5 726 83.42850 1322 2592 2 chr5D.!!$F2 1270
9 TraesCS7B01G407000 chr5D 482562395 482564261 1866 False 436.5 730 82.40150 1012 2681 2 chr5D.!!$F3 1669
10 TraesCS7B01G407000 chr5D 550923389 550924222 833 False 265.0 265 73.13600 1484 2297 1 chr5D.!!$F1 813
11 TraesCS7B01G407000 chr5A 601993271 601994547 1276 False 551.0 699 82.72850 1322 2592 2 chr5A.!!$F1 1270

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
419 422 0.036765 GTGGGTGTGACATTCGGCTA 60.037 55.0 0.00 0.0 0.00 3.93 F
428 431 0.108329 ACATTCGGCTACTGTTCCGG 60.108 55.0 17.15 0.0 45.31 5.14 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1255 3114 0.887836 CATCATGCTGACGGGGATGG 60.888 60.0 0.00 0.0 36.05 3.51 R
2337 4330 1.645034 GCATACACGTGCACATCTCT 58.355 50.0 17.22 0.0 44.43 3.10 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
63 65 5.131809 AGAAGGGAATAAGAAGGATGGAGTG 59.868 44.000 0.00 0.00 0.00 3.51
91 93 2.356913 CACACGGGACATGCGTCA 60.357 61.111 0.00 0.00 44.54 4.35
92 94 1.741401 CACACGGGACATGCGTCAT 60.741 57.895 0.00 0.00 44.54 3.06
93 95 1.003839 ACACGGGACATGCGTCATT 60.004 52.632 0.00 0.00 44.54 2.57
99 101 1.675483 GGGACATGCGTCATTATTGCA 59.325 47.619 0.00 0.00 44.54 4.08
107 109 4.244066 TGCGTCATTATTGCAGCAAAAAT 58.756 34.783 12.97 0.00 33.95 1.82
110 112 6.534436 TGCGTCATTATTGCAGCAAAAATATT 59.466 30.769 12.97 0.00 33.95 1.28
138 141 6.715347 ATTTCAAGGCATATTGTAGAACCC 57.285 37.500 0.00 0.00 0.00 4.11
153 156 2.031870 GAACCCTTTTGCAACAGAGGT 58.968 47.619 14.20 15.15 0.00 3.85
154 157 1.692411 ACCCTTTTGCAACAGAGGTC 58.308 50.000 14.20 0.00 0.00 3.85
155 158 0.593128 CCCTTTTGCAACAGAGGTCG 59.407 55.000 14.20 0.00 0.00 4.79
156 159 0.593128 CCTTTTGCAACAGAGGTCGG 59.407 55.000 14.20 0.00 0.00 4.79
166 169 1.300697 AGAGGTCGGTCGCAAACAC 60.301 57.895 0.00 0.00 0.00 3.32
188 191 2.548920 GGATAAGAAGGATGGAGCGGTG 60.549 54.545 0.00 0.00 0.00 4.94
205 208 0.743345 GTGCGGGGTCTACATGGAAC 60.743 60.000 0.00 0.00 0.00 3.62
214 217 2.987149 GTCTACATGGAACACGTGTCAG 59.013 50.000 23.61 12.33 46.14 3.51
243 246 4.410400 GGTGGAAGCCCCGGTCTG 62.410 72.222 0.00 0.00 37.93 3.51
244 247 4.410400 GTGGAAGCCCCGGTCTGG 62.410 72.222 0.00 0.00 37.93 3.86
246 249 3.090532 GGAAGCCCCGGTCTGGAT 61.091 66.667 0.00 0.00 42.00 3.41
258 261 4.592192 CTGGATCGGCCGCGTGAT 62.592 66.667 23.51 8.89 40.66 3.06
259 262 4.585526 TGGATCGGCCGCGTGATC 62.586 66.667 23.51 18.13 40.66 2.92
261 264 2.356313 GATCGGCCGCGTGATCAT 60.356 61.111 23.51 6.61 40.54 2.45
262 265 1.956170 GATCGGCCGCGTGATCATT 60.956 57.895 23.51 0.00 40.54 2.57
263 266 1.498865 GATCGGCCGCGTGATCATTT 61.499 55.000 23.51 0.00 40.54 2.32
264 267 1.498865 ATCGGCCGCGTGATCATTTC 61.499 55.000 23.51 0.00 0.00 2.17
266 269 2.715624 GCCGCGTGATCATTTCCC 59.284 61.111 4.92 0.00 0.00 3.97
267 270 1.819632 GCCGCGTGATCATTTCCCT 60.820 57.895 4.92 0.00 0.00 4.20
269 272 0.657840 CCGCGTGATCATTTCCCTTC 59.342 55.000 4.92 0.00 0.00 3.46
270 273 1.368641 CGCGTGATCATTTCCCTTCA 58.631 50.000 0.00 0.00 0.00 3.02
273 276 3.181497 CGCGTGATCATTTCCCTTCAAAT 60.181 43.478 0.00 0.00 0.00 2.32
274 277 4.035091 CGCGTGATCATTTCCCTTCAAATA 59.965 41.667 0.00 0.00 0.00 1.40
275 278 5.277974 CGCGTGATCATTTCCCTTCAAATAT 60.278 40.000 0.00 0.00 0.00 1.28
276 279 6.507023 GCGTGATCATTTCCCTTCAAATATT 58.493 36.000 0.00 0.00 0.00 1.28
277 280 6.638468 GCGTGATCATTTCCCTTCAAATATTC 59.362 38.462 0.00 0.00 0.00 1.75
278 281 7.469181 GCGTGATCATTTCCCTTCAAATATTCT 60.469 37.037 0.00 0.00 0.00 2.40
279 282 8.408601 CGTGATCATTTCCCTTCAAATATTCTT 58.591 33.333 0.00 0.00 0.00 2.52
280 283 9.741647 GTGATCATTTCCCTTCAAATATTCTTC 57.258 33.333 0.00 0.00 0.00 2.87
281 284 8.917088 TGATCATTTCCCTTCAAATATTCTTCC 58.083 33.333 0.00 0.00 0.00 3.46
282 285 7.660030 TCATTTCCCTTCAAATATTCTTCCC 57.340 36.000 0.00 0.00 0.00 3.97
283 286 7.188381 TCATTTCCCTTCAAATATTCTTCCCA 58.812 34.615 0.00 0.00 0.00 4.37
284 287 7.342799 TCATTTCCCTTCAAATATTCTTCCCAG 59.657 37.037 0.00 0.00 0.00 4.45
285 288 5.796502 TCCCTTCAAATATTCTTCCCAGT 57.203 39.130 0.00 0.00 0.00 4.00
286 289 5.509498 TCCCTTCAAATATTCTTCCCAGTG 58.491 41.667 0.00 0.00 0.00 3.66
287 290 5.252863 TCCCTTCAAATATTCTTCCCAGTGA 59.747 40.000 0.00 0.00 0.00 3.41
288 291 5.591877 CCCTTCAAATATTCTTCCCAGTGAG 59.408 44.000 0.00 0.00 0.00 3.51
289 292 6.183347 CCTTCAAATATTCTTCCCAGTGAGT 58.817 40.000 0.00 0.00 0.00 3.41
290 293 6.660949 CCTTCAAATATTCTTCCCAGTGAGTT 59.339 38.462 0.00 0.00 0.00 3.01
291 294 7.362401 CCTTCAAATATTCTTCCCAGTGAGTTG 60.362 40.741 0.00 0.00 0.00 3.16
292 295 6.542821 TCAAATATTCTTCCCAGTGAGTTGT 58.457 36.000 0.00 0.00 0.00 3.32
293 296 7.004086 TCAAATATTCTTCCCAGTGAGTTGTT 58.996 34.615 0.00 0.00 0.00 2.83
294 297 7.174946 TCAAATATTCTTCCCAGTGAGTTGTTC 59.825 37.037 0.00 0.00 0.00 3.18
295 298 4.713792 ATTCTTCCCAGTGAGTTGTTCT 57.286 40.909 0.00 0.00 0.00 3.01
296 299 3.753294 TCTTCCCAGTGAGTTGTTCTC 57.247 47.619 0.00 0.00 43.03 2.87
297 300 2.368875 TCTTCCCAGTGAGTTGTTCTCC 59.631 50.000 0.00 0.00 42.12 3.71
298 301 0.679505 TCCCAGTGAGTTGTTCTCCG 59.320 55.000 0.00 0.00 42.12 4.63
299 302 0.951040 CCCAGTGAGTTGTTCTCCGC 60.951 60.000 0.00 0.00 42.12 5.54
300 303 0.951040 CCAGTGAGTTGTTCTCCGCC 60.951 60.000 0.00 0.00 42.12 6.13
301 304 0.249868 CAGTGAGTTGTTCTCCGCCA 60.250 55.000 0.00 0.00 42.12 5.69
302 305 0.468226 AGTGAGTTGTTCTCCGCCAA 59.532 50.000 0.00 0.00 42.12 4.52
303 306 0.586802 GTGAGTTGTTCTCCGCCAAC 59.413 55.000 0.00 0.00 42.12 3.77
304 307 0.179234 TGAGTTGTTCTCCGCCAACA 59.821 50.000 5.45 0.00 42.62 3.33
305 308 1.202758 TGAGTTGTTCTCCGCCAACAT 60.203 47.619 5.45 0.00 42.62 2.71
306 309 1.464997 GAGTTGTTCTCCGCCAACATC 59.535 52.381 5.45 0.00 42.62 3.06
307 310 0.521735 GTTGTTCTCCGCCAACATCC 59.478 55.000 0.00 0.00 40.46 3.51
308 311 0.608035 TTGTTCTCCGCCAACATCCC 60.608 55.000 0.00 0.00 33.76 3.85
309 312 1.002624 GTTCTCCGCCAACATCCCA 60.003 57.895 0.00 0.00 0.00 4.37
310 313 1.002624 TTCTCCGCCAACATCCCAC 60.003 57.895 0.00 0.00 0.00 4.61
311 314 1.488705 TTCTCCGCCAACATCCCACT 61.489 55.000 0.00 0.00 0.00 4.00
312 315 1.450312 CTCCGCCAACATCCCACTC 60.450 63.158 0.00 0.00 0.00 3.51
313 316 1.903877 CTCCGCCAACATCCCACTCT 61.904 60.000 0.00 0.00 0.00 3.24
314 317 1.746615 CCGCCAACATCCCACTCTG 60.747 63.158 0.00 0.00 0.00 3.35
315 318 1.003355 CGCCAACATCCCACTCTGT 60.003 57.895 0.00 0.00 0.00 3.41
316 319 0.606401 CGCCAACATCCCACTCTGTT 60.606 55.000 0.00 0.00 36.04 3.16
317 320 1.168714 GCCAACATCCCACTCTGTTC 58.831 55.000 0.00 0.00 33.45 3.18
318 321 1.271597 GCCAACATCCCACTCTGTTCT 60.272 52.381 0.00 0.00 33.45 3.01
319 322 2.704572 CCAACATCCCACTCTGTTCTC 58.295 52.381 0.00 0.00 33.45 2.87
320 323 2.341257 CAACATCCCACTCTGTTCTCG 58.659 52.381 0.00 0.00 33.45 4.04
321 324 1.924731 ACATCCCACTCTGTTCTCGA 58.075 50.000 0.00 0.00 0.00 4.04
322 325 1.546476 ACATCCCACTCTGTTCTCGAC 59.454 52.381 0.00 0.00 0.00 4.20
323 326 1.134965 CATCCCACTCTGTTCTCGACC 60.135 57.143 0.00 0.00 0.00 4.79
324 327 0.112606 TCCCACTCTGTTCTCGACCT 59.887 55.000 0.00 0.00 0.00 3.85
325 328 1.353358 TCCCACTCTGTTCTCGACCTA 59.647 52.381 0.00 0.00 0.00 3.08
326 329 2.168496 CCCACTCTGTTCTCGACCTAA 58.832 52.381 0.00 0.00 0.00 2.69
327 330 2.094649 CCCACTCTGTTCTCGACCTAAC 60.095 54.545 0.00 0.00 0.00 2.34
328 331 2.557056 CCACTCTGTTCTCGACCTAACA 59.443 50.000 3.89 3.89 34.57 2.41
331 334 1.997669 CTGTTCTCGACCTAACAGGC 58.002 55.000 17.08 0.00 45.68 4.85
332 335 1.272490 CTGTTCTCGACCTAACAGGCA 59.728 52.381 17.08 0.00 45.68 4.75
333 336 1.689813 TGTTCTCGACCTAACAGGCAA 59.310 47.619 0.36 0.00 39.63 4.52
334 337 2.103432 TGTTCTCGACCTAACAGGCAAA 59.897 45.455 0.36 0.00 39.63 3.68
335 338 2.737252 GTTCTCGACCTAACAGGCAAAG 59.263 50.000 0.00 0.00 39.63 2.77
336 339 1.079503 CTCGACCTAACAGGCAAAGC 58.920 55.000 0.00 0.00 39.63 3.51
337 340 0.394938 TCGACCTAACAGGCAAAGCA 59.605 50.000 0.00 0.00 39.63 3.91
338 341 0.798776 CGACCTAACAGGCAAAGCAG 59.201 55.000 0.00 0.00 39.63 4.24
339 342 0.523519 GACCTAACAGGCAAAGCAGC 59.476 55.000 0.00 0.00 39.63 5.25
348 351 2.890941 GCAAAGCAGCCACTGTTTC 58.109 52.632 0.00 0.00 34.01 2.78
349 352 0.386838 GCAAAGCAGCCACTGTTTCT 59.613 50.000 0.00 0.00 34.01 2.52
350 353 1.601412 GCAAAGCAGCCACTGTTTCTC 60.601 52.381 0.00 0.00 34.01 2.87
351 354 1.952296 CAAAGCAGCCACTGTTTCTCT 59.048 47.619 0.00 0.00 34.01 3.10
352 355 2.355010 AAGCAGCCACTGTTTCTCTT 57.645 45.000 0.00 0.00 29.26 2.85
353 356 2.355010 AGCAGCCACTGTTTCTCTTT 57.645 45.000 0.00 0.00 33.43 2.52
354 357 2.659428 AGCAGCCACTGTTTCTCTTTT 58.341 42.857 0.00 0.00 33.43 2.27
355 358 2.620585 AGCAGCCACTGTTTCTCTTTTC 59.379 45.455 0.00 0.00 33.43 2.29
356 359 2.620585 GCAGCCACTGTTTCTCTTTTCT 59.379 45.455 0.00 0.00 33.43 2.52
357 360 3.304324 GCAGCCACTGTTTCTCTTTTCTC 60.304 47.826 0.00 0.00 33.43 2.87
358 361 3.879295 CAGCCACTGTTTCTCTTTTCTCA 59.121 43.478 0.00 0.00 0.00 3.27
359 362 4.518211 CAGCCACTGTTTCTCTTTTCTCAT 59.482 41.667 0.00 0.00 0.00 2.90
360 363 4.759183 AGCCACTGTTTCTCTTTTCTCATC 59.241 41.667 0.00 0.00 0.00 2.92
361 364 4.377841 GCCACTGTTTCTCTTTTCTCATCG 60.378 45.833 0.00 0.00 0.00 3.84
362 365 4.991056 CCACTGTTTCTCTTTTCTCATCGA 59.009 41.667 0.00 0.00 0.00 3.59
363 366 5.107298 CCACTGTTTCTCTTTTCTCATCGAC 60.107 44.000 0.00 0.00 0.00 4.20
364 367 5.463392 CACTGTTTCTCTTTTCTCATCGACA 59.537 40.000 0.00 0.00 0.00 4.35
365 368 5.694006 ACTGTTTCTCTTTTCTCATCGACAG 59.306 40.000 0.00 0.00 37.41 3.51
366 369 4.991056 TGTTTCTCTTTTCTCATCGACAGG 59.009 41.667 0.00 0.00 0.00 4.00
367 370 3.876274 TCTCTTTTCTCATCGACAGGG 57.124 47.619 0.00 0.00 0.00 4.45
368 371 3.431415 TCTCTTTTCTCATCGACAGGGA 58.569 45.455 0.00 0.00 0.00 4.20
369 372 3.193691 TCTCTTTTCTCATCGACAGGGAC 59.806 47.826 0.00 0.00 0.00 4.46
370 373 2.897326 TCTTTTCTCATCGACAGGGACA 59.103 45.455 0.00 0.00 0.00 4.02
371 374 2.743636 TTTCTCATCGACAGGGACAC 57.256 50.000 0.00 0.00 0.00 3.67
372 375 1.627864 TTCTCATCGACAGGGACACA 58.372 50.000 0.00 0.00 0.00 3.72
373 376 1.852633 TCTCATCGACAGGGACACAT 58.147 50.000 0.00 0.00 0.00 3.21
374 377 1.751351 TCTCATCGACAGGGACACATC 59.249 52.381 0.00 0.00 0.00 3.06
375 378 0.455815 TCATCGACAGGGACACATCG 59.544 55.000 0.00 0.00 35.91 3.84
376 379 0.528466 CATCGACAGGGACACATCGG 60.528 60.000 2.01 0.00 35.31 4.18
377 380 0.683179 ATCGACAGGGACACATCGGA 60.683 55.000 2.01 0.00 35.31 4.55
378 381 1.139734 CGACAGGGACACATCGGAG 59.860 63.158 0.00 0.00 0.00 4.63
379 382 1.517832 GACAGGGACACATCGGAGG 59.482 63.158 0.00 0.00 0.00 4.30
380 383 1.229209 ACAGGGACACATCGGAGGT 60.229 57.895 0.00 0.00 0.00 3.85
381 384 0.040646 ACAGGGACACATCGGAGGTA 59.959 55.000 0.00 0.00 0.00 3.08
382 385 1.191535 CAGGGACACATCGGAGGTAA 58.808 55.000 0.00 0.00 0.00 2.85
383 386 1.762957 CAGGGACACATCGGAGGTAAT 59.237 52.381 0.00 0.00 0.00 1.89
384 387 2.040178 AGGGACACATCGGAGGTAATC 58.960 52.381 0.00 0.00 0.00 1.75
385 388 1.070289 GGGACACATCGGAGGTAATCC 59.930 57.143 13.90 13.90 45.64 3.01
396 399 1.619332 GAGGTAATCCAGGTCGATCCC 59.381 57.143 0.00 0.00 36.75 3.85
397 400 1.220750 AGGTAATCCAGGTCGATCCCT 59.779 52.381 0.00 0.00 36.75 4.20
398 401 2.047830 GGTAATCCAGGTCGATCCCTT 58.952 52.381 0.00 0.00 36.75 3.95
399 402 2.037381 GGTAATCCAGGTCGATCCCTTC 59.963 54.545 0.00 0.00 36.75 3.46
413 416 3.322514 CCTTCGTGGGTGTGACATT 57.677 52.632 0.00 0.00 0.00 2.71
414 417 1.156736 CCTTCGTGGGTGTGACATTC 58.843 55.000 0.00 0.00 0.00 2.67
415 418 0.790207 CTTCGTGGGTGTGACATTCG 59.210 55.000 0.00 0.00 0.00 3.34
416 419 0.601576 TTCGTGGGTGTGACATTCGG 60.602 55.000 0.00 0.00 0.00 4.30
417 420 2.677003 CGTGGGTGTGACATTCGGC 61.677 63.158 0.00 0.00 0.00 5.54
418 421 1.302511 GTGGGTGTGACATTCGGCT 60.303 57.895 0.00 0.00 0.00 5.52
419 422 0.036765 GTGGGTGTGACATTCGGCTA 60.037 55.000 0.00 0.00 0.00 3.93
420 423 0.036765 TGGGTGTGACATTCGGCTAC 60.037 55.000 0.00 0.00 0.00 3.58
421 424 0.249398 GGGTGTGACATTCGGCTACT 59.751 55.000 0.00 0.00 0.00 2.57
422 425 1.359848 GGTGTGACATTCGGCTACTG 58.640 55.000 0.00 0.00 0.00 2.74
423 426 1.337823 GGTGTGACATTCGGCTACTGT 60.338 52.381 0.00 0.00 0.00 3.55
424 427 2.413837 GTGTGACATTCGGCTACTGTT 58.586 47.619 0.00 0.00 0.00 3.16
425 428 2.412089 GTGTGACATTCGGCTACTGTTC 59.588 50.000 0.00 0.00 0.00 3.18
426 429 2.000447 GTGACATTCGGCTACTGTTCC 59.000 52.381 0.00 0.00 0.00 3.62
427 430 1.278238 GACATTCGGCTACTGTTCCG 58.722 55.000 12.93 12.93 46.52 4.30
428 431 0.108329 ACATTCGGCTACTGTTCCGG 60.108 55.000 17.15 0.00 45.31 5.14
429 432 0.810031 CATTCGGCTACTGTTCCGGG 60.810 60.000 17.15 0.00 45.31 5.73
430 433 2.588856 ATTCGGCTACTGTTCCGGGC 62.589 60.000 17.15 0.00 45.31 6.13
431 434 3.771160 CGGCTACTGTTCCGGGCT 61.771 66.667 0.00 0.00 41.82 5.19
432 435 2.187163 GGCTACTGTTCCGGGCTC 59.813 66.667 0.00 0.00 0.00 4.70
433 436 2.202756 GCTACTGTTCCGGGCTCG 60.203 66.667 0.00 0.00 0.00 5.03
434 437 2.202756 CTACTGTTCCGGGCTCGC 60.203 66.667 0.00 0.00 34.56 5.03
435 438 3.718210 CTACTGTTCCGGGCTCGCC 62.718 68.421 0.00 0.00 34.56 5.54
456 459 4.459089 GCCAGTCTCTCCGGCCAC 62.459 72.222 2.24 0.00 40.07 5.01
457 460 3.775654 CCAGTCTCTCCGGCCACC 61.776 72.222 2.24 0.00 0.00 4.61
476 479 2.829003 CGACCTCCGCCAGCTAGA 60.829 66.667 0.00 0.00 0.00 2.43
477 480 2.415608 CGACCTCCGCCAGCTAGAA 61.416 63.158 0.00 0.00 0.00 2.10
478 481 1.439644 GACCTCCGCCAGCTAGAAG 59.560 63.158 0.00 0.00 0.00 2.85
479 482 2.107953 CCTCCGCCAGCTAGAAGC 59.892 66.667 0.00 0.00 42.84 3.86
480 483 2.725312 CCTCCGCCAGCTAGAAGCA 61.725 63.158 1.22 0.00 45.56 3.91
481 484 1.227205 CTCCGCCAGCTAGAAGCAG 60.227 63.158 1.22 0.00 45.56 4.24
485 488 2.191641 CCAGCTAGAAGCAGGCCC 59.808 66.667 0.00 0.00 45.56 5.80
486 489 2.191641 CAGCTAGAAGCAGGCCCC 59.808 66.667 0.00 0.00 45.56 5.80
487 490 3.474570 AGCTAGAAGCAGGCCCCG 61.475 66.667 0.00 0.00 45.56 5.73
488 491 3.470888 GCTAGAAGCAGGCCCCGA 61.471 66.667 0.00 0.00 41.89 5.14
489 492 2.501610 CTAGAAGCAGGCCCCGAC 59.498 66.667 0.00 0.00 0.00 4.79
490 493 3.081409 TAGAAGCAGGCCCCGACC 61.081 66.667 0.00 0.00 0.00 4.79
491 494 3.618855 TAGAAGCAGGCCCCGACCT 62.619 63.158 0.00 0.00 42.30 3.85
492 495 4.035102 GAAGCAGGCCCCGACCTT 62.035 66.667 0.00 0.00 38.26 3.50
493 496 3.978571 GAAGCAGGCCCCGACCTTC 62.979 68.421 0.00 0.71 38.26 3.46
500 503 3.400054 CCCCGACCTTCCCTGGAC 61.400 72.222 0.00 0.00 0.00 4.02
501 504 2.284699 CCCGACCTTCCCTGGACT 60.285 66.667 0.00 0.00 0.00 3.85
502 505 2.359967 CCCGACCTTCCCTGGACTC 61.360 68.421 0.00 0.00 0.00 3.36
503 506 2.359967 CCGACCTTCCCTGGACTCC 61.360 68.421 0.00 0.00 0.00 3.85
504 507 1.609501 CGACCTTCCCTGGACTCCA 60.610 63.158 0.00 0.00 0.00 3.86
505 508 1.192146 CGACCTTCCCTGGACTCCAA 61.192 60.000 0.00 0.00 30.80 3.53
506 509 1.290134 GACCTTCCCTGGACTCCAAT 58.710 55.000 0.00 0.00 30.80 3.16
507 510 1.210722 GACCTTCCCTGGACTCCAATC 59.789 57.143 0.00 0.00 30.80 2.67
508 511 1.203492 ACCTTCCCTGGACTCCAATCT 60.203 52.381 0.00 0.00 30.80 2.40
509 512 1.918957 CCTTCCCTGGACTCCAATCTT 59.081 52.381 0.00 0.00 30.80 2.40
510 513 2.092699 CCTTCCCTGGACTCCAATCTTC 60.093 54.545 0.00 0.00 30.80 2.87
511 514 1.195115 TCCCTGGACTCCAATCTTCG 58.805 55.000 0.00 0.00 30.80 3.79
512 515 0.179000 CCCTGGACTCCAATCTTCGG 59.821 60.000 0.00 0.00 30.80 4.30
513 516 0.462759 CCTGGACTCCAATCTTCGGC 60.463 60.000 0.00 0.00 30.80 5.54
514 517 0.462759 CTGGACTCCAATCTTCGGCC 60.463 60.000 0.00 0.00 30.80 6.13
515 518 1.521681 GGACTCCAATCTTCGGCCG 60.522 63.158 22.12 22.12 0.00 6.13
516 519 1.521681 GACTCCAATCTTCGGCCGG 60.522 63.158 27.83 10.69 0.00 6.13
517 520 2.897350 CTCCAATCTTCGGCCGGC 60.897 66.667 27.83 21.18 0.00 6.13
518 521 4.483243 TCCAATCTTCGGCCGGCC 62.483 66.667 36.69 36.69 0.00 6.13
519 522 4.794648 CCAATCTTCGGCCGGCCA 62.795 66.667 42.78 27.76 35.37 5.36
520 523 3.204827 CAATCTTCGGCCGGCCAG 61.205 66.667 42.78 33.01 35.37 4.85
550 553 4.208686 CCGCCTCCACCGAGCTAC 62.209 72.222 0.00 0.00 34.49 3.58
551 554 3.141488 CGCCTCCACCGAGCTACT 61.141 66.667 0.00 0.00 34.49 2.57
552 555 2.809010 GCCTCCACCGAGCTACTC 59.191 66.667 0.00 0.00 34.49 2.59
553 556 1.755008 GCCTCCACCGAGCTACTCT 60.755 63.158 0.00 0.00 34.49 3.24
554 557 1.324005 GCCTCCACCGAGCTACTCTT 61.324 60.000 0.00 0.00 34.49 2.85
555 558 1.187087 CCTCCACCGAGCTACTCTTT 58.813 55.000 0.00 0.00 34.49 2.52
556 559 2.376109 CCTCCACCGAGCTACTCTTTA 58.624 52.381 0.00 0.00 34.49 1.85
557 560 2.099427 CCTCCACCGAGCTACTCTTTAC 59.901 54.545 0.00 0.00 34.49 2.01
558 561 2.097825 TCCACCGAGCTACTCTTTACC 58.902 52.381 0.00 0.00 0.00 2.85
559 562 1.136500 CCACCGAGCTACTCTTTACCC 59.864 57.143 0.00 0.00 0.00 3.69
560 563 1.136500 CACCGAGCTACTCTTTACCCC 59.864 57.143 0.00 0.00 0.00 4.95
561 564 0.751452 CCGAGCTACTCTTTACCCCC 59.249 60.000 0.00 0.00 0.00 5.40
562 565 1.688627 CCGAGCTACTCTTTACCCCCT 60.689 57.143 0.00 0.00 0.00 4.79
563 566 1.409427 CGAGCTACTCTTTACCCCCTG 59.591 57.143 0.00 0.00 0.00 4.45
564 567 1.139256 GAGCTACTCTTTACCCCCTGC 59.861 57.143 0.00 0.00 0.00 4.85
565 568 0.179081 GCTACTCTTTACCCCCTGCG 60.179 60.000 0.00 0.00 0.00 5.18
566 569 0.464452 CTACTCTTTACCCCCTGCGG 59.536 60.000 0.00 0.00 0.00 5.69
567 570 1.619807 TACTCTTTACCCCCTGCGGC 61.620 60.000 0.00 0.00 0.00 6.53
568 571 3.699134 CTCTTTACCCCCTGCGGCC 62.699 68.421 0.00 0.00 0.00 6.13
569 572 4.815108 CTTTACCCCCTGCGGCCC 62.815 72.222 0.00 0.00 0.00 5.80
576 579 4.489771 CCCTGCGGCCCCTACTTG 62.490 72.222 0.00 0.00 0.00 3.16
577 580 3.717294 CCTGCGGCCCCTACTTGT 61.717 66.667 0.00 0.00 0.00 3.16
578 581 2.125106 CTGCGGCCCCTACTTGTC 60.125 66.667 0.00 0.00 0.00 3.18
579 582 2.925706 TGCGGCCCCTACTTGTCA 60.926 61.111 0.00 0.00 0.00 3.58
580 583 2.349755 GCGGCCCCTACTTGTCAA 59.650 61.111 0.00 0.00 0.00 3.18
581 584 1.745489 GCGGCCCCTACTTGTCAAG 60.745 63.158 11.17 11.17 0.00 3.02
582 585 1.745489 CGGCCCCTACTTGTCAAGC 60.745 63.158 12.66 0.00 0.00 4.01
583 586 1.685820 GGCCCCTACTTGTCAAGCT 59.314 57.895 12.66 3.08 0.00 3.74
584 587 0.678048 GGCCCCTACTTGTCAAGCTG 60.678 60.000 12.66 5.58 0.00 4.24
585 588 1.308783 GCCCCTACTTGTCAAGCTGC 61.309 60.000 12.66 4.83 0.00 5.25
586 589 0.326264 CCCCTACTTGTCAAGCTGCT 59.674 55.000 12.66 0.00 0.00 4.24
587 590 1.271597 CCCCTACTTGTCAAGCTGCTT 60.272 52.381 9.53 9.53 0.00 3.91
588 591 2.508526 CCCTACTTGTCAAGCTGCTTT 58.491 47.619 13.10 0.00 0.00 3.51
589 592 2.887152 CCCTACTTGTCAAGCTGCTTTT 59.113 45.455 13.10 0.00 0.00 2.27
590 593 4.072131 CCCTACTTGTCAAGCTGCTTTTA 58.928 43.478 13.10 0.74 0.00 1.52
591 594 4.083271 CCCTACTTGTCAAGCTGCTTTTAC 60.083 45.833 13.10 14.05 0.00 2.01
592 595 3.609103 ACTTGTCAAGCTGCTTTTACG 57.391 42.857 13.10 1.34 0.00 3.18
593 596 2.290641 ACTTGTCAAGCTGCTTTTACGG 59.709 45.455 13.10 12.31 0.00 4.02
594 597 1.234821 TGTCAAGCTGCTTTTACGGG 58.765 50.000 13.10 0.15 0.00 5.28
595 598 0.521735 GTCAAGCTGCTTTTACGGGG 59.478 55.000 13.10 0.00 0.00 5.73
596 599 0.398696 TCAAGCTGCTTTTACGGGGA 59.601 50.000 13.10 2.07 0.00 4.81
597 600 0.804989 CAAGCTGCTTTTACGGGGAG 59.195 55.000 13.10 0.00 0.00 4.30
609 612 1.137697 ACGGGGAGAAAAACAGAGGT 58.862 50.000 0.00 0.00 0.00 3.85
610 613 1.202770 ACGGGGAGAAAAACAGAGGTG 60.203 52.381 0.00 0.00 0.00 4.00
670 673 0.459489 AGCAGCATCCTTCTCGACTC 59.541 55.000 0.00 0.00 0.00 3.36
675 678 1.202359 GCATCCTTCTCGACTCAGGTC 60.202 57.143 0.78 0.00 38.97 3.85
689 692 0.391263 CAGGTCGTTCCCAGGTTAGC 60.391 60.000 0.00 0.00 36.75 3.09
754 757 2.226912 AGCTCTGTCGTACTGTCTTGTC 59.773 50.000 0.00 0.00 0.00 3.18
802 805 6.127479 TGTGCCCAAATCTAAATTACCATGTC 60.127 38.462 0.00 0.00 0.00 3.06
911 917 5.885449 AGAGGTCAATAAGGAGAAGATGG 57.115 43.478 0.00 0.00 0.00 3.51
972 979 9.453572 TCGACCCGTAAAATATACAGATATACT 57.546 33.333 0.00 0.00 0.00 2.12
1026 1033 1.202114 GATGCAAATTCGGAGCCAACA 59.798 47.619 0.00 0.00 0.00 3.33
1122 1129 3.746940 TGGAAAGGTGTACTTGGTAAGC 58.253 45.455 0.00 0.00 39.96 3.09
1151 1166 3.990469 GTGTATATGGCTTCCTGACATCG 59.010 47.826 0.00 0.00 41.43 3.84
1192 1207 9.961265 CTATACACTACCATCATTTAGACGAAA 57.039 33.333 0.00 0.00 0.00 3.46
1243 1632 1.645710 TTGGTGACCCTCCTTCTCTC 58.354 55.000 0.00 0.00 0.00 3.20
1389 3298 9.655769 CATATTGTCATGTAGCAGTAAATGTTC 57.344 33.333 0.00 0.00 0.00 3.18
1816 3771 4.949856 TGAGAATTCTCCTTATTTGGTGCC 59.050 41.667 28.40 3.87 42.20 5.01
1894 3849 6.381707 GGATTTGCCAGGGTTTAAATTACCTA 59.618 38.462 8.24 0.00 34.66 3.08
1896 3851 4.602107 TGCCAGGGTTTAAATTACCTACC 58.398 43.478 8.24 0.00 35.92 3.18
2007 3965 4.860802 TTGGGATATCAAGGCTCTTCAA 57.139 40.909 4.83 0.00 0.00 2.69
2274 4267 5.411831 TCAATAGTGCTGACATGTCTTCT 57.588 39.130 25.55 18.44 0.00 2.85
2347 4340 7.692460 ATGTTTTCTTATCAAGAGATGTGCA 57.308 32.000 0.00 0.00 39.03 4.57
2657 4666 5.105716 ACTGATCGCTATTAACACAGTGTCT 60.106 40.000 6.67 0.21 36.11 3.41
2674 4683 6.183360 ACAGTGTCTTCGTCTTAAACTGTACT 60.183 38.462 3.86 0.00 43.53 2.73
2680 4689 7.861872 GTCTTCGTCTTAAACTGTACTCTTCTT 59.138 37.037 0.00 0.00 0.00 2.52
2681 4690 8.074972 TCTTCGTCTTAAACTGTACTCTTCTTC 58.925 37.037 0.00 0.00 0.00 2.87
2682 4691 7.507733 TCGTCTTAAACTGTACTCTTCTTCT 57.492 36.000 0.00 0.00 0.00 2.85
2683 4692 7.938715 TCGTCTTAAACTGTACTCTTCTTCTT 58.061 34.615 0.00 0.00 0.00 2.52
2684 4693 8.074972 TCGTCTTAAACTGTACTCTTCTTCTTC 58.925 37.037 0.00 0.00 0.00 2.87
2685 4694 8.077386 CGTCTTAAACTGTACTCTTCTTCTTCT 58.923 37.037 0.00 0.00 0.00 2.85
2686 4695 9.752961 GTCTTAAACTGTACTCTTCTTCTTCTT 57.247 33.333 0.00 0.00 0.00 2.52
2687 4696 9.968870 TCTTAAACTGTACTCTTCTTCTTCTTC 57.031 33.333 0.00 0.00 0.00 2.87
2688 4697 9.974980 CTTAAACTGTACTCTTCTTCTTCTTCT 57.025 33.333 0.00 0.00 0.00 2.85
2691 4700 9.674068 AAACTGTACTCTTCTTCTTCTTCTTTT 57.326 29.630 0.00 0.00 0.00 2.27
2692 4701 9.674068 AACTGTACTCTTCTTCTTCTTCTTTTT 57.326 29.630 0.00 0.00 0.00 1.94
2693 4702 9.320352 ACTGTACTCTTCTTCTTCTTCTTTTTC 57.680 33.333 0.00 0.00 0.00 2.29
2694 4703 8.664211 TGTACTCTTCTTCTTCTTCTTTTTCC 57.336 34.615 0.00 0.00 0.00 3.13
2695 4704 8.487028 TGTACTCTTCTTCTTCTTCTTTTTCCT 58.513 33.333 0.00 0.00 0.00 3.36
2696 4705 9.984190 GTACTCTTCTTCTTCTTCTTTTTCCTA 57.016 33.333 0.00 0.00 0.00 2.94
2698 4707 9.500785 ACTCTTCTTCTTCTTCTTTTTCCTATG 57.499 33.333 0.00 0.00 0.00 2.23
2699 4708 8.854614 TCTTCTTCTTCTTCTTTTTCCTATGG 57.145 34.615 0.00 0.00 0.00 2.74
2700 4709 8.660435 TCTTCTTCTTCTTCTTTTTCCTATGGA 58.340 33.333 0.00 0.00 0.00 3.41
2701 4710 9.460019 CTTCTTCTTCTTCTTTTTCCTATGGAT 57.540 33.333 0.00 0.00 0.00 3.41
2712 4721 1.673767 CCTATGGATAGGGCATGGGT 58.326 55.000 4.92 0.00 44.97 4.51
2713 4722 2.845659 CCTATGGATAGGGCATGGGTA 58.154 52.381 4.92 0.00 44.97 3.69
2714 4723 2.505819 CCTATGGATAGGGCATGGGTAC 59.494 54.545 4.92 0.00 44.97 3.34
2715 4724 2.132303 ATGGATAGGGCATGGGTACA 57.868 50.000 0.00 0.00 0.00 2.90
2716 4725 2.132303 TGGATAGGGCATGGGTACAT 57.868 50.000 0.00 0.00 37.99 2.29
2717 4726 1.985159 TGGATAGGGCATGGGTACATC 59.015 52.381 0.00 0.00 34.35 3.06
2718 4727 2.269940 GGATAGGGCATGGGTACATCT 58.730 52.381 0.00 0.00 34.35 2.90
2719 4728 2.237392 GGATAGGGCATGGGTACATCTC 59.763 54.545 0.00 0.00 34.35 2.75
2720 4729 2.795291 TAGGGCATGGGTACATCTCT 57.205 50.000 0.00 0.00 34.35 3.10
2721 4730 1.135094 AGGGCATGGGTACATCTCTG 58.865 55.000 0.00 0.00 34.35 3.35
2722 4731 0.839946 GGGCATGGGTACATCTCTGT 59.160 55.000 0.00 0.00 39.49 3.41
2723 4732 1.475751 GGGCATGGGTACATCTCTGTG 60.476 57.143 0.00 0.00 36.79 3.66
2724 4733 1.303309 GCATGGGTACATCTCTGTGC 58.697 55.000 0.00 0.00 36.79 4.57
2731 4740 3.444703 GTACATCTCTGTGCCCACTAG 57.555 52.381 0.00 0.00 36.79 2.57
2732 4741 0.539051 ACATCTCTGTGCCCACTAGC 59.461 55.000 0.00 0.00 33.22 3.42
2733 4742 0.538584 CATCTCTGTGCCCACTAGCA 59.461 55.000 0.00 0.00 41.46 3.49
2734 4743 1.140452 CATCTCTGTGCCCACTAGCAT 59.860 52.381 0.00 0.00 46.24 3.79
2735 4744 0.538584 TCTCTGTGCCCACTAGCATG 59.461 55.000 0.00 0.00 46.24 4.06
2736 4745 1.078214 TCTGTGCCCACTAGCATGC 60.078 57.895 10.51 10.51 46.24 4.06
2737 4746 2.045045 TGTGCCCACTAGCATGCC 60.045 61.111 15.66 0.00 46.24 4.40
2738 4747 2.045045 GTGCCCACTAGCATGCCA 60.045 61.111 15.66 0.00 46.24 4.92
2739 4748 2.117156 GTGCCCACTAGCATGCCAG 61.117 63.158 15.66 13.63 46.24 4.85
2740 4749 2.300197 TGCCCACTAGCATGCCAGA 61.300 57.895 20.39 2.08 38.00 3.86
2741 4750 1.077501 GCCCACTAGCATGCCAGAA 60.078 57.895 20.39 0.00 0.00 3.02
2742 4751 0.466922 GCCCACTAGCATGCCAGAAT 60.467 55.000 20.39 0.27 0.00 2.40
2743 4752 1.602311 CCCACTAGCATGCCAGAATC 58.398 55.000 20.39 0.00 0.00 2.52
2744 4753 1.602311 CCACTAGCATGCCAGAATCC 58.398 55.000 20.39 0.00 0.00 3.01
2745 4754 1.134007 CCACTAGCATGCCAGAATCCA 60.134 52.381 20.39 0.00 0.00 3.41
2746 4755 1.945394 CACTAGCATGCCAGAATCCAC 59.055 52.381 20.39 0.00 0.00 4.02
2747 4756 1.133976 ACTAGCATGCCAGAATCCACC 60.134 52.381 20.39 0.00 0.00 4.61
2748 4757 0.183492 TAGCATGCCAGAATCCACCC 59.817 55.000 15.66 0.00 0.00 4.61
2749 4758 2.129785 GCATGCCAGAATCCACCCC 61.130 63.158 6.36 0.00 0.00 4.95
2765 4774 0.249120 CCCCGACAAGCTGACATGTA 59.751 55.000 0.00 0.00 0.00 2.29
2925 5047 2.028876 GTGTATGGGGTTGTTATGCCC 58.971 52.381 0.00 0.00 44.09 5.36
2968 5090 4.500375 GCCATCTTAAATCCAATCCAGTGC 60.500 45.833 0.00 0.00 0.00 4.40
3047 5169 5.067674 GGCAGTTTGGCACATATAGATTTCA 59.932 40.000 0.00 0.00 43.14 2.69
3048 5170 5.973565 GCAGTTTGGCACATATAGATTTCAC 59.026 40.000 0.00 0.00 39.30 3.18
3049 5171 6.194463 CAGTTTGGCACATATAGATTTCACG 58.806 40.000 0.00 0.00 39.30 4.35
3050 5172 5.880332 AGTTTGGCACATATAGATTTCACGT 59.120 36.000 0.00 0.00 39.30 4.49
3051 5173 5.733226 TTGGCACATATAGATTTCACGTG 57.267 39.130 9.94 9.94 39.30 4.49
3052 5174 4.765273 TGGCACATATAGATTTCACGTGT 58.235 39.130 16.51 0.00 0.00 4.49
3053 5175 4.570369 TGGCACATATAGATTTCACGTGTG 59.430 41.667 16.51 5.44 38.69 3.82
3054 5176 4.570772 GGCACATATAGATTTCACGTGTGT 59.429 41.667 16.51 6.13 38.13 3.72
3055 5177 9.210935 TTGGCACATATAGATTTCACGTGTGTG 62.211 40.741 19.76 19.76 43.33 3.82
3056 5178 5.502382 GCACATATAGATTTCACGTGTGTGG 60.502 44.000 23.14 11.19 46.42 4.17
3057 5179 5.006649 CACATATAGATTTCACGTGTGTGGG 59.993 44.000 16.51 0.00 46.42 4.61
3058 5180 3.695830 ATAGATTTCACGTGTGTGGGT 57.304 42.857 16.51 0.01 46.42 4.51
3059 5181 1.593196 AGATTTCACGTGTGTGGGTG 58.407 50.000 16.51 0.00 46.42 4.61
3060 5182 0.591170 GATTTCACGTGTGTGGGTGG 59.409 55.000 16.51 0.00 46.42 4.61
3061 5183 0.821711 ATTTCACGTGTGTGGGTGGG 60.822 55.000 16.51 0.00 46.42 4.61
3062 5184 4.555709 TCACGTGTGTGGGTGGGC 62.556 66.667 16.51 0.00 46.42 5.36
3063 5185 4.866224 CACGTGTGTGGGTGGGCA 62.866 66.667 7.58 0.00 42.59 5.36
3064 5186 3.884774 ACGTGTGTGGGTGGGCAT 61.885 61.111 0.00 0.00 0.00 4.40
3065 5187 2.597217 CGTGTGTGGGTGGGCATT 60.597 61.111 0.00 0.00 0.00 3.56
3066 5188 2.918345 CGTGTGTGGGTGGGCATTG 61.918 63.158 0.00 0.00 0.00 2.82
3067 5189 2.916703 TGTGTGGGTGGGCATTGC 60.917 61.111 0.00 0.00 0.00 3.56
3068 5190 2.916703 GTGTGGGTGGGCATTGCA 60.917 61.111 11.39 0.00 0.00 4.08
3069 5191 2.601067 TGTGGGTGGGCATTGCAG 60.601 61.111 11.39 0.00 0.00 4.41
3070 5192 4.073200 GTGGGTGGGCATTGCAGC 62.073 66.667 11.39 0.09 0.00 5.25
3071 5193 4.304413 TGGGTGGGCATTGCAGCT 62.304 61.111 11.39 0.00 34.17 4.24
3072 5194 3.455469 GGGTGGGCATTGCAGCTC 61.455 66.667 11.39 0.00 34.90 4.09
3073 5195 3.455469 GGTGGGCATTGCAGCTCC 61.455 66.667 11.39 2.81 32.74 4.70
3074 5196 3.818787 GTGGGCATTGCAGCTCCG 61.819 66.667 11.39 0.00 32.74 4.63
3075 5197 4.032452 TGGGCATTGCAGCTCCGA 62.032 61.111 11.39 0.00 32.74 4.55
3076 5198 3.207669 GGGCATTGCAGCTCCGAG 61.208 66.667 11.39 0.00 34.17 4.63
3077 5199 2.124983 GGCATTGCAGCTCCGAGA 60.125 61.111 11.39 0.00 34.17 4.04
3078 5200 2.467826 GGCATTGCAGCTCCGAGAC 61.468 63.158 11.39 0.00 34.17 3.36
3079 5201 1.742880 GCATTGCAGCTCCGAGACA 60.743 57.895 3.15 0.00 0.00 3.41
3080 5202 1.094073 GCATTGCAGCTCCGAGACAT 61.094 55.000 3.15 0.00 0.00 3.06
3081 5203 0.656259 CATTGCAGCTCCGAGACATG 59.344 55.000 0.00 0.00 0.00 3.21
3082 5204 0.251354 ATTGCAGCTCCGAGACATGT 59.749 50.000 0.00 0.00 0.00 3.21
3083 5205 0.671472 TTGCAGCTCCGAGACATGTG 60.671 55.000 1.15 0.00 0.00 3.21
3084 5206 1.079543 GCAGCTCCGAGACATGTGT 60.080 57.895 1.15 0.00 0.00 3.72
3085 5207 1.357258 GCAGCTCCGAGACATGTGTG 61.357 60.000 1.15 0.00 0.00 3.82
3086 5208 0.738762 CAGCTCCGAGACATGTGTGG 60.739 60.000 1.15 0.00 0.00 4.17
3087 5209 1.448540 GCTCCGAGACATGTGTGGG 60.449 63.158 16.81 16.81 0.00 4.61
3088 5210 1.448540 CTCCGAGACATGTGTGGGC 60.449 63.158 17.93 0.00 0.00 5.36
3089 5211 2.171209 CTCCGAGACATGTGTGGGCA 62.171 60.000 17.93 7.40 0.00 5.36
3090 5212 1.078214 CCGAGACATGTGTGGGCAT 60.078 57.895 11.12 0.00 0.00 4.40
3091 5213 0.677731 CCGAGACATGTGTGGGCATT 60.678 55.000 11.12 0.00 0.00 3.56
3092 5214 0.729116 CGAGACATGTGTGGGCATTC 59.271 55.000 1.15 0.00 0.00 2.67
3093 5215 1.676916 CGAGACATGTGTGGGCATTCT 60.677 52.381 1.15 0.00 0.00 2.40
3094 5216 2.440409 GAGACATGTGTGGGCATTCTT 58.560 47.619 1.15 0.00 0.00 2.52
3095 5217 2.163010 GAGACATGTGTGGGCATTCTTG 59.837 50.000 1.15 0.00 0.00 3.02
3115 5237 4.339872 TGCACCAAGATTGCAAGAAATT 57.660 36.364 4.94 0.00 46.90 1.82
3116 5238 4.309099 TGCACCAAGATTGCAAGAAATTC 58.691 39.130 4.94 0.00 46.90 2.17
3117 5239 4.202233 TGCACCAAGATTGCAAGAAATTCA 60.202 37.500 4.94 0.00 46.90 2.57
3118 5240 4.151157 GCACCAAGATTGCAAGAAATTCAC 59.849 41.667 4.94 0.00 39.93 3.18
3119 5241 5.291178 CACCAAGATTGCAAGAAATTCACA 58.709 37.500 4.94 0.00 0.00 3.58
3120 5242 5.929992 CACCAAGATTGCAAGAAATTCACAT 59.070 36.000 4.94 0.00 0.00 3.21
3121 5243 5.929992 ACCAAGATTGCAAGAAATTCACATG 59.070 36.000 4.94 0.00 0.00 3.21
3122 5244 5.929992 CCAAGATTGCAAGAAATTCACATGT 59.070 36.000 4.94 0.00 0.00 3.21
3123 5245 6.425721 CCAAGATTGCAAGAAATTCACATGTT 59.574 34.615 4.94 0.00 0.00 2.71
3124 5246 7.041644 CCAAGATTGCAAGAAATTCACATGTTT 60.042 33.333 4.94 0.00 0.00 2.83
3125 5247 7.416154 AGATTGCAAGAAATTCACATGTTTG 57.584 32.000 4.94 0.00 0.00 2.93
3126 5248 6.987992 AGATTGCAAGAAATTCACATGTTTGT 59.012 30.769 4.94 0.00 36.15 2.83
3127 5249 8.143193 AGATTGCAAGAAATTCACATGTTTGTA 58.857 29.630 4.94 0.00 33.76 2.41
3128 5250 7.697352 TTGCAAGAAATTCACATGTTTGTAG 57.303 32.000 0.00 0.00 33.76 2.74
3129 5251 6.804677 TGCAAGAAATTCACATGTTTGTAGT 58.195 32.000 0.00 0.00 33.76 2.73
3130 5252 7.264221 TGCAAGAAATTCACATGTTTGTAGTT 58.736 30.769 0.00 0.00 33.76 2.24
3131 5253 8.409371 TGCAAGAAATTCACATGTTTGTAGTTA 58.591 29.630 0.00 0.00 33.76 2.24
3132 5254 8.690840 GCAAGAAATTCACATGTTTGTAGTTAC 58.309 33.333 0.00 0.00 33.76 2.50
3133 5255 9.729023 CAAGAAATTCACATGTTTGTAGTTACA 57.271 29.630 0.00 0.00 33.76 2.41
3136 5258 9.891828 GAAATTCACATGTTTGTAGTTACATCA 57.108 29.630 0.00 0.00 35.89 3.07
3160 5282 9.323985 TCAAAATTTTGTCTTTAATCAAGGGTG 57.676 29.630 25.98 0.00 39.18 4.61
3161 5283 7.728847 AAATTTTGTCTTTAATCAAGGGTGC 57.271 32.000 0.00 0.00 32.64 5.01
3162 5284 5.860941 TTTTGTCTTTAATCAAGGGTGCA 57.139 34.783 0.00 0.00 32.64 4.57
3163 5285 4.846779 TTGTCTTTAATCAAGGGTGCAC 57.153 40.909 8.80 8.80 32.64 4.57
3164 5286 3.826524 TGTCTTTAATCAAGGGTGCACA 58.173 40.909 20.43 0.00 32.64 4.57
3165 5287 4.211125 TGTCTTTAATCAAGGGTGCACAA 58.789 39.130 20.43 0.00 32.64 3.33
3166 5288 4.037446 TGTCTTTAATCAAGGGTGCACAAC 59.963 41.667 20.43 11.03 32.64 3.32
3167 5289 4.278419 GTCTTTAATCAAGGGTGCACAACT 59.722 41.667 20.43 13.36 32.64 3.16
3168 5290 4.892934 TCTTTAATCAAGGGTGCACAACTT 59.107 37.500 20.43 18.59 32.64 2.66
3169 5291 5.362430 TCTTTAATCAAGGGTGCACAACTTT 59.638 36.000 20.43 9.79 32.64 2.66
3170 5292 3.733443 AATCAAGGGTGCACAACTTTC 57.267 42.857 20.43 0.00 0.00 2.62
3171 5293 2.136298 TCAAGGGTGCACAACTTTCA 57.864 45.000 20.43 8.25 0.00 2.69
3172 5294 2.665165 TCAAGGGTGCACAACTTTCAT 58.335 42.857 20.43 0.00 0.00 2.57
3173 5295 2.622942 TCAAGGGTGCACAACTTTCATC 59.377 45.455 20.43 0.00 0.00 2.92
3174 5296 2.624838 CAAGGGTGCACAACTTTCATCT 59.375 45.455 20.43 0.00 0.00 2.90
3175 5297 2.233271 AGGGTGCACAACTTTCATCTG 58.767 47.619 20.43 0.00 0.00 2.90
3176 5298 2.158623 AGGGTGCACAACTTTCATCTGA 60.159 45.455 20.43 0.00 0.00 3.27
3177 5299 2.622942 GGGTGCACAACTTTCATCTGAA 59.377 45.455 20.43 0.00 0.00 3.02
3178 5300 3.550842 GGGTGCACAACTTTCATCTGAAC 60.551 47.826 20.43 0.00 33.13 3.18
3179 5301 3.066621 GGTGCACAACTTTCATCTGAACA 59.933 43.478 20.43 0.00 33.13 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 5.649831 AGGATCTCTGTTGCAAAAGGATTAC 59.350 40.000 16.70 13.34 0.00 1.89
63 65 2.436646 CCGTGTGGATCCTGCACC 60.437 66.667 24.31 13.07 37.97 5.01
136 139 0.593128 CGACCTCTGTTGCAAAAGGG 59.407 55.000 16.70 13.42 32.97 3.95
138 141 1.264288 GACCGACCTCTGTTGCAAAAG 59.736 52.381 10.64 10.64 0.00 2.27
153 156 0.038435 TTATCCGTGTTTGCGACCGA 60.038 50.000 0.00 0.00 0.00 4.69
154 157 0.368907 CTTATCCGTGTTTGCGACCG 59.631 55.000 0.00 0.00 0.00 4.79
155 158 1.717194 TCTTATCCGTGTTTGCGACC 58.283 50.000 0.00 0.00 0.00 4.79
156 159 2.093783 CCTTCTTATCCGTGTTTGCGAC 59.906 50.000 0.00 0.00 0.00 5.19
166 169 1.337260 CCGCTCCATCCTTCTTATCCG 60.337 57.143 0.00 0.00 0.00 4.18
188 191 0.743345 GTGTTCCATGTAGACCCCGC 60.743 60.000 0.00 0.00 0.00 6.13
205 208 1.515088 CTCTAGCGCCTGACACGTG 60.515 63.158 15.48 15.48 0.00 4.49
241 244 4.592192 ATCACGCGGCCGATCCAG 62.592 66.667 33.48 16.07 38.29 3.86
242 245 4.585526 GATCACGCGGCCGATCCA 62.586 66.667 33.48 9.89 38.29 3.41
243 246 3.865929 ATGATCACGCGGCCGATCC 62.866 63.158 33.48 10.82 37.77 3.36
244 247 1.498865 AAATGATCACGCGGCCGATC 61.499 55.000 33.48 22.95 38.81 3.69
246 249 2.125310 AAATGATCACGCGGCCGA 60.125 55.556 33.48 8.40 38.29 5.54
249 252 1.376609 AAGGGAAATGATCACGCGGC 61.377 55.000 12.47 0.00 36.19 6.53
250 253 0.657840 GAAGGGAAATGATCACGCGG 59.342 55.000 12.47 0.00 36.19 6.46
251 254 1.368641 TGAAGGGAAATGATCACGCG 58.631 50.000 3.53 3.53 36.19 6.01
252 255 3.848272 TTTGAAGGGAAATGATCACGC 57.152 42.857 0.00 0.00 36.19 5.34
253 256 7.934457 AGAATATTTGAAGGGAAATGATCACG 58.066 34.615 0.00 0.00 36.19 4.35
254 257 9.741647 GAAGAATATTTGAAGGGAAATGATCAC 57.258 33.333 0.00 0.00 0.00 3.06
255 258 8.917088 GGAAGAATATTTGAAGGGAAATGATCA 58.083 33.333 0.00 0.00 0.00 2.92
256 259 8.363390 GGGAAGAATATTTGAAGGGAAATGATC 58.637 37.037 0.00 0.00 0.00 2.92
257 260 7.845800 TGGGAAGAATATTTGAAGGGAAATGAT 59.154 33.333 0.00 0.00 0.00 2.45
258 261 7.188381 TGGGAAGAATATTTGAAGGGAAATGA 58.812 34.615 0.00 0.00 0.00 2.57
259 262 7.124750 ACTGGGAAGAATATTTGAAGGGAAATG 59.875 37.037 0.00 0.00 0.00 2.32
261 264 6.437162 CACTGGGAAGAATATTTGAAGGGAAA 59.563 38.462 0.00 0.00 0.00 3.13
262 265 5.951747 CACTGGGAAGAATATTTGAAGGGAA 59.048 40.000 0.00 0.00 0.00 3.97
263 266 5.252863 TCACTGGGAAGAATATTTGAAGGGA 59.747 40.000 0.00 0.00 0.00 4.20
264 267 5.509498 TCACTGGGAAGAATATTTGAAGGG 58.491 41.667 0.00 0.00 0.00 3.95
266 269 7.175641 ACAACTCACTGGGAAGAATATTTGAAG 59.824 37.037 0.00 0.00 0.00 3.02
267 270 7.004086 ACAACTCACTGGGAAGAATATTTGAA 58.996 34.615 0.00 0.00 0.00 2.69
269 272 6.824305 ACAACTCACTGGGAAGAATATTTG 57.176 37.500 0.00 0.00 0.00 2.32
270 273 7.234355 AGAACAACTCACTGGGAAGAATATTT 58.766 34.615 0.00 0.00 0.00 1.40
273 276 5.280011 GGAGAACAACTCACTGGGAAGAATA 60.280 44.000 0.00 0.00 46.54 1.75
274 277 4.505742 GGAGAACAACTCACTGGGAAGAAT 60.506 45.833 0.00 0.00 46.54 2.40
275 278 3.181454 GGAGAACAACTCACTGGGAAGAA 60.181 47.826 0.00 0.00 46.54 2.52
276 279 2.368875 GGAGAACAACTCACTGGGAAGA 59.631 50.000 0.00 0.00 46.54 2.87
277 280 2.772287 GGAGAACAACTCACTGGGAAG 58.228 52.381 0.00 0.00 46.54 3.46
278 281 1.070134 CGGAGAACAACTCACTGGGAA 59.930 52.381 0.00 0.00 46.54 3.97
279 282 0.679505 CGGAGAACAACTCACTGGGA 59.320 55.000 0.00 0.00 46.54 4.37
280 283 0.951040 GCGGAGAACAACTCACTGGG 60.951 60.000 0.00 0.00 46.54 4.45
281 284 0.951040 GGCGGAGAACAACTCACTGG 60.951 60.000 0.00 0.00 46.54 4.00
282 285 0.249868 TGGCGGAGAACAACTCACTG 60.250 55.000 0.00 0.00 46.54 3.66
283 286 0.468226 TTGGCGGAGAACAACTCACT 59.532 50.000 0.00 0.00 46.54 3.41
284 287 0.586802 GTTGGCGGAGAACAACTCAC 59.413 55.000 0.00 0.00 46.54 3.51
285 288 0.179234 TGTTGGCGGAGAACAACTCA 59.821 50.000 8.71 0.00 46.54 3.41
286 289 1.464997 GATGTTGGCGGAGAACAACTC 59.535 52.381 8.71 0.00 43.71 3.01
287 290 1.523758 GATGTTGGCGGAGAACAACT 58.476 50.000 8.71 0.00 43.71 3.16
288 291 0.521735 GGATGTTGGCGGAGAACAAC 59.478 55.000 0.00 0.00 43.66 3.32
289 292 0.608035 GGGATGTTGGCGGAGAACAA 60.608 55.000 0.00 0.00 36.90 2.83
290 293 1.002624 GGGATGTTGGCGGAGAACA 60.003 57.895 0.00 0.00 37.70 3.18
291 294 1.002624 TGGGATGTTGGCGGAGAAC 60.003 57.895 0.00 0.00 0.00 3.01
292 295 1.002624 GTGGGATGTTGGCGGAGAA 60.003 57.895 0.00 0.00 0.00 2.87
293 296 1.899437 GAGTGGGATGTTGGCGGAGA 61.899 60.000 0.00 0.00 0.00 3.71
294 297 1.450312 GAGTGGGATGTTGGCGGAG 60.450 63.158 0.00 0.00 0.00 4.63
295 298 1.918293 AGAGTGGGATGTTGGCGGA 60.918 57.895 0.00 0.00 0.00 5.54
296 299 1.746615 CAGAGTGGGATGTTGGCGG 60.747 63.158 0.00 0.00 0.00 6.13
297 300 0.606401 AACAGAGTGGGATGTTGGCG 60.606 55.000 0.00 0.00 38.19 5.69
298 301 1.168714 GAACAGAGTGGGATGTTGGC 58.831 55.000 0.00 0.00 39.66 4.52
299 302 2.704572 GAGAACAGAGTGGGATGTTGG 58.295 52.381 0.00 0.00 39.66 3.77
300 303 2.029020 TCGAGAACAGAGTGGGATGTTG 60.029 50.000 0.00 0.00 39.66 3.33
301 304 2.028930 GTCGAGAACAGAGTGGGATGTT 60.029 50.000 0.00 0.00 42.17 2.71
302 305 1.546476 GTCGAGAACAGAGTGGGATGT 59.454 52.381 0.00 0.00 0.00 3.06
303 306 1.134965 GGTCGAGAACAGAGTGGGATG 60.135 57.143 0.00 0.00 0.00 3.51
304 307 1.187087 GGTCGAGAACAGAGTGGGAT 58.813 55.000 0.00 0.00 0.00 3.85
305 308 0.112606 AGGTCGAGAACAGAGTGGGA 59.887 55.000 0.00 0.00 0.00 4.37
306 309 1.835494 TAGGTCGAGAACAGAGTGGG 58.165 55.000 0.00 0.00 0.00 4.61
307 310 2.557056 TGTTAGGTCGAGAACAGAGTGG 59.443 50.000 3.91 0.00 31.98 4.00
308 311 3.917329 TGTTAGGTCGAGAACAGAGTG 57.083 47.619 3.91 0.00 31.98 3.51
313 316 1.334160 TGCCTGTTAGGTCGAGAACA 58.666 50.000 7.14 7.14 37.80 3.18
314 317 2.450609 TTGCCTGTTAGGTCGAGAAC 57.549 50.000 0.00 0.00 37.80 3.01
315 318 2.870435 GCTTTGCCTGTTAGGTCGAGAA 60.870 50.000 0.00 0.00 37.80 2.87
316 319 1.337823 GCTTTGCCTGTTAGGTCGAGA 60.338 52.381 0.00 0.00 37.80 4.04
317 320 1.079503 GCTTTGCCTGTTAGGTCGAG 58.920 55.000 0.00 0.00 37.80 4.04
318 321 0.394938 TGCTTTGCCTGTTAGGTCGA 59.605 50.000 0.00 0.00 37.80 4.20
319 322 0.798776 CTGCTTTGCCTGTTAGGTCG 59.201 55.000 0.00 0.00 37.80 4.79
320 323 0.523519 GCTGCTTTGCCTGTTAGGTC 59.476 55.000 0.00 0.00 37.80 3.85
321 324 2.646121 GCTGCTTTGCCTGTTAGGT 58.354 52.632 0.00 0.00 37.80 3.08
330 333 0.386838 AGAAACAGTGGCTGCTTTGC 59.613 50.000 0.00 0.00 34.37 3.68
331 334 1.952296 AGAGAAACAGTGGCTGCTTTG 59.048 47.619 0.00 0.00 34.37 2.77
332 335 2.355010 AGAGAAACAGTGGCTGCTTT 57.645 45.000 0.00 0.00 34.37 3.51
333 336 2.355010 AAGAGAAACAGTGGCTGCTT 57.645 45.000 0.00 0.00 34.37 3.91
334 337 2.355010 AAAGAGAAACAGTGGCTGCT 57.645 45.000 0.00 0.00 34.37 4.24
335 338 2.620585 AGAAAAGAGAAACAGTGGCTGC 59.379 45.455 0.00 0.00 34.37 5.25
336 339 3.879295 TGAGAAAAGAGAAACAGTGGCTG 59.121 43.478 0.00 0.00 37.52 4.85
337 340 4.156455 TGAGAAAAGAGAAACAGTGGCT 57.844 40.909 0.00 0.00 0.00 4.75
338 341 4.377841 CGATGAGAAAAGAGAAACAGTGGC 60.378 45.833 0.00 0.00 0.00 5.01
339 342 4.991056 TCGATGAGAAAAGAGAAACAGTGG 59.009 41.667 0.00 0.00 0.00 4.00
340 343 5.463392 TGTCGATGAGAAAAGAGAAACAGTG 59.537 40.000 0.00 0.00 0.00 3.66
341 344 5.601662 TGTCGATGAGAAAAGAGAAACAGT 58.398 37.500 0.00 0.00 0.00 3.55
342 345 5.119898 CCTGTCGATGAGAAAAGAGAAACAG 59.880 44.000 0.00 0.00 0.00 3.16
343 346 4.991056 CCTGTCGATGAGAAAAGAGAAACA 59.009 41.667 0.00 0.00 0.00 2.83
344 347 4.390297 CCCTGTCGATGAGAAAAGAGAAAC 59.610 45.833 0.00 0.00 0.00 2.78
345 348 4.283467 TCCCTGTCGATGAGAAAAGAGAAA 59.717 41.667 0.00 0.00 0.00 2.52
346 349 3.832490 TCCCTGTCGATGAGAAAAGAGAA 59.168 43.478 0.00 0.00 0.00 2.87
347 350 3.193691 GTCCCTGTCGATGAGAAAAGAGA 59.806 47.826 0.00 0.00 0.00 3.10
348 351 3.056536 TGTCCCTGTCGATGAGAAAAGAG 60.057 47.826 0.00 0.00 0.00 2.85
349 352 2.897326 TGTCCCTGTCGATGAGAAAAGA 59.103 45.455 0.00 0.00 0.00 2.52
350 353 2.996621 GTGTCCCTGTCGATGAGAAAAG 59.003 50.000 0.00 0.00 0.00 2.27
351 354 2.367241 TGTGTCCCTGTCGATGAGAAAA 59.633 45.455 0.00 0.00 0.00 2.29
352 355 1.967779 TGTGTCCCTGTCGATGAGAAA 59.032 47.619 0.00 0.00 0.00 2.52
353 356 1.627864 TGTGTCCCTGTCGATGAGAA 58.372 50.000 0.00 0.00 0.00 2.87
354 357 1.751351 GATGTGTCCCTGTCGATGAGA 59.249 52.381 0.00 0.00 0.00 3.27
355 358 1.534805 CGATGTGTCCCTGTCGATGAG 60.535 57.143 0.00 0.00 36.25 2.90
356 359 0.455815 CGATGTGTCCCTGTCGATGA 59.544 55.000 0.00 0.00 36.25 2.92
357 360 0.528466 CCGATGTGTCCCTGTCGATG 60.528 60.000 0.00 0.00 36.25 3.84
358 361 0.683179 TCCGATGTGTCCCTGTCGAT 60.683 55.000 0.00 0.00 36.25 3.59
359 362 1.303806 TCCGATGTGTCCCTGTCGA 60.304 57.895 0.00 0.00 36.25 4.20
360 363 1.139734 CTCCGATGTGTCCCTGTCG 59.860 63.158 0.00 0.00 0.00 4.35
361 364 1.258445 ACCTCCGATGTGTCCCTGTC 61.258 60.000 0.00 0.00 0.00 3.51
362 365 0.040646 TACCTCCGATGTGTCCCTGT 59.959 55.000 0.00 0.00 0.00 4.00
363 366 1.191535 TTACCTCCGATGTGTCCCTG 58.808 55.000 0.00 0.00 0.00 4.45
364 367 2.040178 GATTACCTCCGATGTGTCCCT 58.960 52.381 0.00 0.00 0.00 4.20
365 368 1.070289 GGATTACCTCCGATGTGTCCC 59.930 57.143 0.00 0.00 33.29 4.46
366 369 2.528041 GGATTACCTCCGATGTGTCC 57.472 55.000 0.00 0.00 33.29 4.02
375 378 1.619332 GGATCGACCTGGATTACCTCC 59.381 57.143 0.00 0.00 45.19 4.30
376 379 1.619332 GGGATCGACCTGGATTACCTC 59.381 57.143 0.00 0.00 38.98 3.85
377 380 1.220750 AGGGATCGACCTGGATTACCT 59.779 52.381 0.00 0.00 40.04 3.08
378 381 1.718280 AGGGATCGACCTGGATTACC 58.282 55.000 0.00 0.00 40.04 2.85
379 382 3.388345 GAAGGGATCGACCTGGATTAC 57.612 52.381 0.00 0.00 40.87 1.89
395 398 1.156736 GAATGTCACACCCACGAAGG 58.843 55.000 0.00 0.00 37.03 3.46
396 399 0.790207 CGAATGTCACACCCACGAAG 59.210 55.000 0.00 0.00 0.00 3.79
397 400 0.601576 CCGAATGTCACACCCACGAA 60.602 55.000 0.00 0.00 0.00 3.85
398 401 1.005512 CCGAATGTCACACCCACGA 60.006 57.895 0.00 0.00 0.00 4.35
399 402 2.677003 GCCGAATGTCACACCCACG 61.677 63.158 0.00 0.00 0.00 4.94
400 403 0.036765 TAGCCGAATGTCACACCCAC 60.037 55.000 0.00 0.00 0.00 4.61
401 404 0.036765 GTAGCCGAATGTCACACCCA 60.037 55.000 0.00 0.00 0.00 4.51
402 405 0.249398 AGTAGCCGAATGTCACACCC 59.751 55.000 0.00 0.00 0.00 4.61
403 406 1.337823 ACAGTAGCCGAATGTCACACC 60.338 52.381 0.00 0.00 0.00 4.16
404 407 2.080286 ACAGTAGCCGAATGTCACAC 57.920 50.000 0.00 0.00 0.00 3.82
405 408 2.611971 GGAACAGTAGCCGAATGTCACA 60.612 50.000 0.00 0.00 0.00 3.58
406 409 2.000447 GGAACAGTAGCCGAATGTCAC 59.000 52.381 0.00 0.00 0.00 3.67
407 410 2.380084 GGAACAGTAGCCGAATGTCA 57.620 50.000 0.00 0.00 0.00 3.58
414 417 3.718210 GAGCCCGGAACAGTAGCCG 62.718 68.421 0.73 7.62 46.80 5.52
415 418 2.187163 GAGCCCGGAACAGTAGCC 59.813 66.667 0.73 0.00 0.00 3.93
416 419 2.202756 CGAGCCCGGAACAGTAGC 60.203 66.667 0.73 0.00 0.00 3.58
417 420 2.202756 GCGAGCCCGGAACAGTAG 60.203 66.667 0.73 0.00 36.06 2.57
418 421 3.766691 GGCGAGCCCGGAACAGTA 61.767 66.667 0.73 0.00 36.06 2.74
441 444 4.135153 CGGTGGCCGGAGAGACTG 62.135 72.222 5.05 0.00 44.15 3.51
459 462 2.343163 CTTCTAGCTGGCGGAGGTCG 62.343 65.000 0.00 0.00 42.76 4.79
460 463 1.439644 CTTCTAGCTGGCGGAGGTC 59.560 63.158 0.00 0.00 33.31 3.85
461 464 2.726351 GCTTCTAGCTGGCGGAGGT 61.726 63.158 0.00 0.00 38.45 3.85
462 465 2.107953 GCTTCTAGCTGGCGGAGG 59.892 66.667 0.00 0.00 38.45 4.30
463 466 1.227205 CTGCTTCTAGCTGGCGGAG 60.227 63.158 0.00 0.00 42.97 4.63
464 467 2.895680 CTGCTTCTAGCTGGCGGA 59.104 61.111 0.00 0.00 42.97 5.54
469 472 2.191641 GGGGCCTGCTTCTAGCTG 59.808 66.667 0.84 0.00 42.97 4.24
470 473 3.474570 CGGGGCCTGCTTCTAGCT 61.475 66.667 0.84 0.00 42.97 3.32
471 474 3.470888 TCGGGGCCTGCTTCTAGC 61.471 66.667 7.74 0.00 42.82 3.42
472 475 2.501610 GTCGGGGCCTGCTTCTAG 59.498 66.667 7.74 0.00 0.00 2.43
473 476 3.081409 GGTCGGGGCCTGCTTCTA 61.081 66.667 7.74 0.00 0.00 2.10
475 478 3.978571 GAAGGTCGGGGCCTGCTTC 62.979 68.421 14.48 14.48 39.17 3.86
476 479 4.035102 GAAGGTCGGGGCCTGCTT 62.035 66.667 7.74 6.18 39.17 3.91
483 486 3.400054 GTCCAGGGAAGGTCGGGG 61.400 72.222 0.00 0.00 0.00 5.73
484 487 2.284699 AGTCCAGGGAAGGTCGGG 60.285 66.667 0.00 0.00 0.00 5.14
485 488 2.359967 GGAGTCCAGGGAAGGTCGG 61.360 68.421 3.60 0.00 0.00 4.79
486 489 1.192146 TTGGAGTCCAGGGAAGGTCG 61.192 60.000 12.67 0.00 33.81 4.79
487 490 1.210722 GATTGGAGTCCAGGGAAGGTC 59.789 57.143 12.67 0.34 33.81 3.85
488 491 1.203492 AGATTGGAGTCCAGGGAAGGT 60.203 52.381 12.67 0.00 33.81 3.50
489 492 1.589414 AGATTGGAGTCCAGGGAAGG 58.411 55.000 12.67 0.00 33.81 3.46
490 493 2.419297 CGAAGATTGGAGTCCAGGGAAG 60.419 54.545 12.67 0.31 33.81 3.46
491 494 1.555075 CGAAGATTGGAGTCCAGGGAA 59.445 52.381 12.67 0.00 33.81 3.97
492 495 1.195115 CGAAGATTGGAGTCCAGGGA 58.805 55.000 12.67 0.00 33.81 4.20
493 496 0.179000 CCGAAGATTGGAGTCCAGGG 59.821 60.000 12.67 4.71 33.81 4.45
494 497 0.462759 GCCGAAGATTGGAGTCCAGG 60.463 60.000 12.67 10.16 33.81 4.45
495 498 0.462759 GGCCGAAGATTGGAGTCCAG 60.463 60.000 12.67 0.00 33.81 3.86
496 499 1.602237 GGCCGAAGATTGGAGTCCA 59.398 57.895 8.12 8.12 0.00 4.02
497 500 1.521681 CGGCCGAAGATTGGAGTCC 60.522 63.158 24.07 0.73 0.00 3.85
498 501 1.521681 CCGGCCGAAGATTGGAGTC 60.522 63.158 30.73 0.00 0.00 3.36
499 502 2.584608 CCGGCCGAAGATTGGAGT 59.415 61.111 30.73 0.00 0.00 3.85
500 503 2.897350 GCCGGCCGAAGATTGGAG 60.897 66.667 30.73 7.40 0.00 3.86
501 504 4.483243 GGCCGGCCGAAGATTGGA 62.483 66.667 33.60 0.00 0.00 3.53
502 505 4.794648 TGGCCGGCCGAAGATTGG 62.795 66.667 39.00 9.14 39.42 3.16
503 506 3.204827 CTGGCCGGCCGAAGATTG 61.205 66.667 39.00 18.65 39.42 2.67
533 536 4.208686 GTAGCTCGGTGGAGGCGG 62.209 72.222 0.00 0.00 40.80 6.13
534 537 3.127352 GAGTAGCTCGGTGGAGGCG 62.127 68.421 0.00 0.00 40.80 5.52
535 538 1.324005 AAGAGTAGCTCGGTGGAGGC 61.324 60.000 0.00 0.00 40.80 4.70
536 539 1.187087 AAAGAGTAGCTCGGTGGAGG 58.813 55.000 0.00 0.00 40.80 4.30
537 540 2.099427 GGTAAAGAGTAGCTCGGTGGAG 59.901 54.545 0.00 0.00 43.46 3.86
538 541 2.097825 GGTAAAGAGTAGCTCGGTGGA 58.902 52.381 0.00 0.00 35.36 4.02
539 542 1.136500 GGGTAAAGAGTAGCTCGGTGG 59.864 57.143 0.00 0.00 35.36 4.61
540 543 1.136500 GGGGTAAAGAGTAGCTCGGTG 59.864 57.143 0.00 0.00 35.36 4.94
541 544 1.482954 GGGGTAAAGAGTAGCTCGGT 58.517 55.000 0.00 0.00 35.36 4.69
542 545 0.751452 GGGGGTAAAGAGTAGCTCGG 59.249 60.000 0.00 0.00 35.36 4.63
543 546 1.409427 CAGGGGGTAAAGAGTAGCTCG 59.591 57.143 0.00 0.00 35.36 5.03
544 547 1.139256 GCAGGGGGTAAAGAGTAGCTC 59.861 57.143 0.00 0.00 0.00 4.09
545 548 1.205055 GCAGGGGGTAAAGAGTAGCT 58.795 55.000 0.00 0.00 0.00 3.32
546 549 0.179081 CGCAGGGGGTAAAGAGTAGC 60.179 60.000 0.00 0.00 0.00 3.58
561 564 2.125106 GACAAGTAGGGGCCGCAG 60.125 66.667 23.39 8.47 0.00 5.18
562 565 2.463589 CTTGACAAGTAGGGGCCGCA 62.464 60.000 23.39 5.16 0.00 5.69
563 566 1.745489 CTTGACAAGTAGGGGCCGC 60.745 63.158 12.88 12.88 0.00 6.53
564 567 1.745489 GCTTGACAAGTAGGGGCCG 60.745 63.158 16.39 0.00 0.00 6.13
565 568 0.678048 CAGCTTGACAAGTAGGGGCC 60.678 60.000 16.39 0.00 0.00 5.80
566 569 1.308783 GCAGCTTGACAAGTAGGGGC 61.309 60.000 16.39 9.33 0.00 5.80
567 570 0.326264 AGCAGCTTGACAAGTAGGGG 59.674 55.000 16.39 3.77 0.00 4.79
568 571 2.191128 AAGCAGCTTGACAAGTAGGG 57.809 50.000 16.39 5.36 0.00 3.53
569 572 4.377431 CGTAAAAGCAGCTTGACAAGTAGG 60.377 45.833 16.39 7.61 0.00 3.18
570 573 4.377431 CCGTAAAAGCAGCTTGACAAGTAG 60.377 45.833 16.39 10.21 0.00 2.57
571 574 3.496884 CCGTAAAAGCAGCTTGACAAGTA 59.503 43.478 16.39 0.00 0.00 2.24
572 575 2.290641 CCGTAAAAGCAGCTTGACAAGT 59.709 45.455 16.39 1.18 0.00 3.16
573 576 2.350772 CCCGTAAAAGCAGCTTGACAAG 60.351 50.000 8.88 11.02 0.00 3.16
574 577 1.606668 CCCGTAAAAGCAGCTTGACAA 59.393 47.619 8.88 0.00 0.00 3.18
575 578 1.234821 CCCGTAAAAGCAGCTTGACA 58.765 50.000 8.88 0.00 0.00 3.58
576 579 0.521735 CCCCGTAAAAGCAGCTTGAC 59.478 55.000 8.88 9.28 0.00 3.18
577 580 0.398696 TCCCCGTAAAAGCAGCTTGA 59.601 50.000 8.88 0.00 0.00 3.02
578 581 0.804989 CTCCCCGTAAAAGCAGCTTG 59.195 55.000 8.88 0.00 0.00 4.01
579 582 0.690762 TCTCCCCGTAAAAGCAGCTT 59.309 50.000 0.21 0.21 0.00 3.74
580 583 0.690762 TTCTCCCCGTAAAAGCAGCT 59.309 50.000 0.00 0.00 0.00 4.24
581 584 1.530323 TTTCTCCCCGTAAAAGCAGC 58.470 50.000 0.00 0.00 0.00 5.25
582 585 3.316868 TGTTTTTCTCCCCGTAAAAGCAG 59.683 43.478 0.00 0.00 32.93 4.24
583 586 3.288964 TGTTTTTCTCCCCGTAAAAGCA 58.711 40.909 0.00 0.00 34.68 3.91
584 587 3.566742 TCTGTTTTTCTCCCCGTAAAAGC 59.433 43.478 0.00 0.00 0.00 3.51
585 588 4.215613 CCTCTGTTTTTCTCCCCGTAAAAG 59.784 45.833 0.00 0.00 0.00 2.27
586 589 4.139038 CCTCTGTTTTTCTCCCCGTAAAA 58.861 43.478 0.00 0.00 0.00 1.52
587 590 3.136992 ACCTCTGTTTTTCTCCCCGTAAA 59.863 43.478 0.00 0.00 0.00 2.01
588 591 2.707257 ACCTCTGTTTTTCTCCCCGTAA 59.293 45.455 0.00 0.00 0.00 3.18
589 592 2.038033 CACCTCTGTTTTTCTCCCCGTA 59.962 50.000 0.00 0.00 0.00 4.02
590 593 1.137697 ACCTCTGTTTTTCTCCCCGT 58.862 50.000 0.00 0.00 0.00 5.28
591 594 1.523758 CACCTCTGTTTTTCTCCCCG 58.476 55.000 0.00 0.00 0.00 5.73
592 595 1.248486 GCACCTCTGTTTTTCTCCCC 58.752 55.000 0.00 0.00 0.00 4.81
593 596 1.202940 AGGCACCTCTGTTTTTCTCCC 60.203 52.381 0.00 0.00 0.00 4.30
594 597 2.155279 GAGGCACCTCTGTTTTTCTCC 58.845 52.381 9.54 0.00 39.80 3.71
609 612 2.421952 GCAGTGGAATTATGGAGAGGCA 60.422 50.000 0.00 0.00 0.00 4.75
610 613 2.225467 GCAGTGGAATTATGGAGAGGC 58.775 52.381 0.00 0.00 0.00 4.70
618 621 2.825532 GTGGTTGGTGCAGTGGAATTAT 59.174 45.455 0.00 0.00 0.00 1.28
670 673 0.391263 GCTAACCTGGGAACGACCTG 60.391 60.000 0.00 0.00 38.98 4.00
675 678 0.953960 AAAGCGCTAACCTGGGAACG 60.954 55.000 12.05 0.00 0.00 3.95
689 692 2.269241 GAGGGAGTGGGGAAAGCG 59.731 66.667 0.00 0.00 0.00 4.68
754 757 1.597937 GCAAAAGGTCGTCAAGTGCAG 60.598 52.381 0.00 0.00 0.00 4.41
934 940 0.373716 CGGGTCGAATAAGCAACAGC 59.626 55.000 0.00 0.00 0.00 4.40
973 980 9.608617 GCTGTTACAGAAGGAAATAAAACTTAC 57.391 33.333 17.40 0.00 32.44 2.34
974 981 9.344772 TGCTGTTACAGAAGGAAATAAAACTTA 57.655 29.630 17.40 0.00 32.44 2.24
1026 1033 6.509656 TCGTAATAAATCGAGTGGCATAACT 58.490 36.000 0.00 0.00 0.00 2.24
1122 1129 7.498900 TGTCAGGAAGCCATATACACAATTAAG 59.501 37.037 0.00 0.00 0.00 1.85
1192 1207 8.137745 ACAATGACAAAATCACCATATTCCTT 57.862 30.769 0.00 0.00 41.24 3.36
1255 3114 0.887836 CATCATGCTGACGGGGATGG 60.888 60.000 0.00 0.00 36.05 3.51
1816 3771 8.328864 CAATCATATCTATCACATTCATCTGCG 58.671 37.037 0.00 0.00 0.00 5.18
1894 3849 7.189087 ACATAGGAGGTTTTAATTCATTGGGT 58.811 34.615 0.00 0.00 0.00 4.51
2007 3965 3.255888 TGTAGCTCGTGTCTGTTCATCTT 59.744 43.478 0.00 0.00 0.00 2.40
2323 4316 7.533426 GTGCACATCTCTTGATAAGAAAACAT 58.467 34.615 13.17 0.00 37.02 2.71
2324 4317 6.347644 CGTGCACATCTCTTGATAAGAAAACA 60.348 38.462 18.64 0.00 37.02 2.83
2325 4318 6.017933 CGTGCACATCTCTTGATAAGAAAAC 58.982 40.000 18.64 0.00 37.02 2.43
2326 4319 5.700832 ACGTGCACATCTCTTGATAAGAAAA 59.299 36.000 18.64 0.00 37.02 2.29
2327 4320 5.120674 CACGTGCACATCTCTTGATAAGAAA 59.879 40.000 18.64 0.00 37.02 2.52
2328 4321 4.627035 CACGTGCACATCTCTTGATAAGAA 59.373 41.667 18.64 0.00 37.02 2.52
2329 4322 4.176271 CACGTGCACATCTCTTGATAAGA 58.824 43.478 18.64 0.00 35.87 2.10
2330 4323 3.928992 ACACGTGCACATCTCTTGATAAG 59.071 43.478 17.22 0.00 0.00 1.73
2331 4324 3.925379 ACACGTGCACATCTCTTGATAA 58.075 40.909 17.22 0.00 0.00 1.75
2332 4325 3.592898 ACACGTGCACATCTCTTGATA 57.407 42.857 17.22 0.00 0.00 2.15
2333 4326 2.462456 ACACGTGCACATCTCTTGAT 57.538 45.000 17.22 0.00 0.00 2.57
2334 4327 3.253230 CATACACGTGCACATCTCTTGA 58.747 45.455 17.22 0.00 0.00 3.02
2335 4328 2.222886 GCATACACGTGCACATCTCTTG 60.223 50.000 17.22 7.88 44.43 3.02
2336 4329 2.002586 GCATACACGTGCACATCTCTT 58.997 47.619 17.22 0.00 44.43 2.85
2337 4330 1.645034 GCATACACGTGCACATCTCT 58.355 50.000 17.22 0.00 44.43 3.10
2345 4338 4.908736 ACTTATGAAATGCATACACGTGC 58.091 39.130 17.22 1.31 45.25 5.34
2346 4339 9.580916 GTATTACTTATGAAATGCATACACGTG 57.419 33.333 15.48 15.48 39.14 4.49
2347 4340 9.542462 AGTATTACTTATGAAATGCATACACGT 57.458 29.630 0.00 5.31 39.14 4.49
2409 4412 5.916883 CAGTTTTTCTGCACCTACAGATTTG 59.083 40.000 0.00 0.00 45.75 2.32
2623 4632 7.229907 TGTTAATAGCGATCAGTACATACCTGA 59.770 37.037 0.00 0.00 0.00 3.86
2657 4666 7.938715 AGAAGAAGAGTACAGTTTAAGACGAA 58.061 34.615 0.00 0.00 0.00 3.85
2674 4683 8.660435 TCCATAGGAAAAAGAAGAAGAAGAAGA 58.340 33.333 0.00 0.00 0.00 2.87
2694 4703 3.181329 TGTACCCATGCCCTATCCATAG 58.819 50.000 0.00 0.00 0.00 2.23
2695 4704 3.283712 TGTACCCATGCCCTATCCATA 57.716 47.619 0.00 0.00 0.00 2.74
2696 4705 2.132303 TGTACCCATGCCCTATCCAT 57.868 50.000 0.00 0.00 0.00 3.41
2697 4706 1.985159 GATGTACCCATGCCCTATCCA 59.015 52.381 0.00 0.00 0.00 3.41
2698 4707 2.237392 GAGATGTACCCATGCCCTATCC 59.763 54.545 0.00 0.00 0.00 2.59
2699 4708 3.055530 CAGAGATGTACCCATGCCCTATC 60.056 52.174 0.00 0.00 0.00 2.08
2700 4709 2.909006 CAGAGATGTACCCATGCCCTAT 59.091 50.000 0.00 0.00 0.00 2.57
2701 4710 2.329267 CAGAGATGTACCCATGCCCTA 58.671 52.381 0.00 0.00 0.00 3.53
2702 4711 1.135094 CAGAGATGTACCCATGCCCT 58.865 55.000 0.00 0.00 0.00 5.19
2703 4712 0.839946 ACAGAGATGTACCCATGCCC 59.160 55.000 0.00 0.00 0.00 5.36
2704 4713 1.959042 CACAGAGATGTACCCATGCC 58.041 55.000 0.00 0.00 0.00 4.40
2705 4714 1.303309 GCACAGAGATGTACCCATGC 58.697 55.000 0.00 0.00 0.00 4.06
2706 4715 1.475751 GGGCACAGAGATGTACCCATG 60.476 57.143 11.14 0.00 43.38 3.66
2707 4716 0.839946 GGGCACAGAGATGTACCCAT 59.160 55.000 11.14 0.00 43.38 4.00
2708 4717 2.296920 GGGCACAGAGATGTACCCA 58.703 57.895 11.14 0.00 43.38 4.51
2709 4718 0.107654 GTGGGCACAGAGATGTACCC 60.108 60.000 9.38 9.38 44.01 3.69
2710 4719 0.905357 AGTGGGCACAGAGATGTACC 59.095 55.000 0.00 0.00 0.00 3.34
2711 4720 2.482142 GCTAGTGGGCACAGAGATGTAC 60.482 54.545 1.86 0.00 0.00 2.90
2712 4721 1.757118 GCTAGTGGGCACAGAGATGTA 59.243 52.381 1.86 0.00 0.00 2.29
2713 4722 0.539051 GCTAGTGGGCACAGAGATGT 59.461 55.000 1.86 0.00 0.00 3.06
2714 4723 0.538584 TGCTAGTGGGCACAGAGATG 59.461 55.000 1.86 0.00 37.29 2.90
2715 4724 1.140452 CATGCTAGTGGGCACAGAGAT 59.860 52.381 1.86 0.00 45.36 2.75
2716 4725 0.538584 CATGCTAGTGGGCACAGAGA 59.461 55.000 1.86 0.00 45.36 3.10
2717 4726 1.094073 GCATGCTAGTGGGCACAGAG 61.094 60.000 11.37 0.00 45.36 3.35
2718 4727 1.078214 GCATGCTAGTGGGCACAGA 60.078 57.895 11.37 0.00 45.36 3.41
2719 4728 2.117156 GGCATGCTAGTGGGCACAG 61.117 63.158 18.92 0.00 45.36 3.66
2720 4729 2.045045 GGCATGCTAGTGGGCACA 60.045 61.111 18.92 0.00 45.36 4.57
2721 4730 2.045045 TGGCATGCTAGTGGGCAC 60.045 61.111 18.92 0.00 45.36 5.01
2722 4731 1.851065 TTCTGGCATGCTAGTGGGCA 61.851 55.000 27.75 10.32 46.63 5.36
2723 4732 0.466922 ATTCTGGCATGCTAGTGGGC 60.467 55.000 27.75 5.95 0.00 5.36
2724 4733 1.602311 GATTCTGGCATGCTAGTGGG 58.398 55.000 27.75 6.33 0.00 4.61
2725 4734 1.134007 TGGATTCTGGCATGCTAGTGG 60.134 52.381 27.75 6.70 0.00 4.00
2726 4735 1.945394 GTGGATTCTGGCATGCTAGTG 59.055 52.381 27.75 7.45 0.00 2.74
2727 4736 1.133976 GGTGGATTCTGGCATGCTAGT 60.134 52.381 27.75 12.19 0.00 2.57
2728 4737 1.602311 GGTGGATTCTGGCATGCTAG 58.398 55.000 24.02 24.02 0.00 3.42
2729 4738 0.183492 GGGTGGATTCTGGCATGCTA 59.817 55.000 18.92 11.28 0.00 3.49
2730 4739 1.076485 GGGTGGATTCTGGCATGCT 60.076 57.895 18.92 0.00 0.00 3.79
2731 4740 2.129785 GGGGTGGATTCTGGCATGC 61.130 63.158 9.90 9.90 0.00 4.06
2732 4741 1.825191 CGGGGTGGATTCTGGCATG 60.825 63.158 0.00 0.00 0.00 4.06
2733 4742 2.000701 TCGGGGTGGATTCTGGCAT 61.001 57.895 0.00 0.00 0.00 4.40
2734 4743 2.609299 TCGGGGTGGATTCTGGCA 60.609 61.111 0.00 0.00 0.00 4.92
2735 4744 2.124695 GTCGGGGTGGATTCTGGC 60.125 66.667 0.00 0.00 0.00 4.85
2736 4745 0.392998 CTTGTCGGGGTGGATTCTGG 60.393 60.000 0.00 0.00 0.00 3.86
2737 4746 1.026718 GCTTGTCGGGGTGGATTCTG 61.027 60.000 0.00 0.00 0.00 3.02
2738 4747 1.201429 AGCTTGTCGGGGTGGATTCT 61.201 55.000 0.00 0.00 0.00 2.40
2739 4748 1.026718 CAGCTTGTCGGGGTGGATTC 61.027 60.000 0.00 0.00 0.00 2.52
2740 4749 1.002134 CAGCTTGTCGGGGTGGATT 60.002 57.895 0.00 0.00 0.00 3.01
2741 4750 1.918293 TCAGCTTGTCGGGGTGGAT 60.918 57.895 0.00 0.00 33.61 3.41
2742 4751 2.525629 TCAGCTTGTCGGGGTGGA 60.526 61.111 0.00 0.00 33.61 4.02
2743 4752 2.358737 GTCAGCTTGTCGGGGTGG 60.359 66.667 0.00 0.00 33.61 4.61
2744 4753 1.003355 ATGTCAGCTTGTCGGGGTG 60.003 57.895 0.00 0.00 0.00 4.61
2745 4754 1.003355 CATGTCAGCTTGTCGGGGT 60.003 57.895 0.00 0.00 0.00 4.95
2746 4755 0.249120 TACATGTCAGCTTGTCGGGG 59.751 55.000 0.00 0.00 35.14 5.73
2747 4756 1.645034 CTACATGTCAGCTTGTCGGG 58.355 55.000 0.00 0.00 35.14 5.14
2748 4757 1.645034 CCTACATGTCAGCTTGTCGG 58.355 55.000 0.00 0.00 35.14 4.79
2749 4758 1.645034 CCCTACATGTCAGCTTGTCG 58.355 55.000 0.00 0.00 35.14 4.35
2765 4774 4.586235 ACGCAGCAGTTTGGCCCT 62.586 61.111 0.00 0.00 0.00 5.19
2895 5017 1.887242 CCCATACACATGCCCGACG 60.887 63.158 0.00 0.00 0.00 5.12
2925 5047 3.497942 GGCAATGGGTTAGGTATAGGGTG 60.498 52.174 0.00 0.00 0.00 4.61
2997 5119 1.143684 ACAGCAGAGCCAAGAAAAGGA 59.856 47.619 0.00 0.00 0.00 3.36
3047 5169 3.429372 AATGCCCACCCACACACGT 62.429 57.895 0.00 0.00 0.00 4.49
3048 5170 2.597217 AATGCCCACCCACACACG 60.597 61.111 0.00 0.00 0.00 4.49
3049 5171 3.050339 CAATGCCCACCCACACAC 58.950 61.111 0.00 0.00 0.00 3.82
3050 5172 2.916703 GCAATGCCCACCCACACA 60.917 61.111 0.00 0.00 0.00 3.72
3051 5173 2.916703 TGCAATGCCCACCCACAC 60.917 61.111 1.53 0.00 0.00 3.82
3052 5174 2.601067 CTGCAATGCCCACCCACA 60.601 61.111 1.53 0.00 0.00 4.17
3053 5175 4.073200 GCTGCAATGCCCACCCAC 62.073 66.667 1.53 0.00 0.00 4.61
3054 5176 4.304413 AGCTGCAATGCCCACCCA 62.304 61.111 1.53 0.00 0.00 4.51
3055 5177 3.455469 GAGCTGCAATGCCCACCC 61.455 66.667 1.53 0.00 0.00 4.61
3056 5178 3.455469 GGAGCTGCAATGCCCACC 61.455 66.667 1.53 0.00 0.00 4.61
3057 5179 3.818787 CGGAGCTGCAATGCCCAC 61.819 66.667 5.91 0.00 0.00 4.61
3058 5180 3.982316 CTCGGAGCTGCAATGCCCA 62.982 63.158 5.91 0.00 0.00 5.36
3059 5181 3.207669 CTCGGAGCTGCAATGCCC 61.208 66.667 5.91 0.00 0.00 5.36
3060 5182 2.124983 TCTCGGAGCTGCAATGCC 60.125 61.111 5.91 0.00 0.00 4.40
3061 5183 1.094073 ATGTCTCGGAGCTGCAATGC 61.094 55.000 5.91 0.00 0.00 3.56
3062 5184 0.656259 CATGTCTCGGAGCTGCAATG 59.344 55.000 5.91 0.00 0.00 2.82
3063 5185 0.251354 ACATGTCTCGGAGCTGCAAT 59.749 50.000 5.91 0.00 0.00 3.56
3064 5186 0.671472 CACATGTCTCGGAGCTGCAA 60.671 55.000 5.91 0.00 0.00 4.08
3065 5187 1.079612 CACATGTCTCGGAGCTGCA 60.080 57.895 5.91 0.00 0.00 4.41
3066 5188 1.079543 ACACATGTCTCGGAGCTGC 60.080 57.895 0.00 0.00 0.00 5.25
3067 5189 0.738762 CCACACATGTCTCGGAGCTG 60.739 60.000 0.00 0.68 0.00 4.24
3068 5190 1.593787 CCACACATGTCTCGGAGCT 59.406 57.895 0.00 0.00 0.00 4.09
3069 5191 1.448540 CCCACACATGTCTCGGAGC 60.449 63.158 0.00 0.00 0.00 4.70
3070 5192 1.448540 GCCCACACATGTCTCGGAG 60.449 63.158 0.00 0.00 0.00 4.63
3071 5193 1.552799 ATGCCCACACATGTCTCGGA 61.553 55.000 0.00 0.00 0.00 4.55
3072 5194 0.677731 AATGCCCACACATGTCTCGG 60.678 55.000 0.00 0.00 0.00 4.63
3073 5195 0.729116 GAATGCCCACACATGTCTCG 59.271 55.000 0.00 0.00 0.00 4.04
3074 5196 2.119801 AGAATGCCCACACATGTCTC 57.880 50.000 0.00 0.00 0.00 3.36
3075 5197 2.165167 CAAGAATGCCCACACATGTCT 58.835 47.619 0.00 0.00 0.00 3.41
3076 5198 2.642139 CAAGAATGCCCACACATGTC 57.358 50.000 0.00 0.00 0.00 3.06
3095 5217 4.151157 GTGAATTTCTTGCAATCTTGGTGC 59.849 41.667 0.00 0.00 42.55 5.01
3096 5218 5.291178 TGTGAATTTCTTGCAATCTTGGTG 58.709 37.500 0.00 0.00 0.00 4.17
3097 5219 5.534207 TGTGAATTTCTTGCAATCTTGGT 57.466 34.783 0.00 0.00 0.00 3.67
3098 5220 5.929992 ACATGTGAATTTCTTGCAATCTTGG 59.070 36.000 0.00 0.00 0.00 3.61
3099 5221 7.416154 AACATGTGAATTTCTTGCAATCTTG 57.584 32.000 0.00 0.00 0.00 3.02
3100 5222 7.496591 ACAAACATGTGAATTTCTTGCAATCTT 59.503 29.630 0.00 0.00 0.00 2.40
3101 5223 6.987992 ACAAACATGTGAATTTCTTGCAATCT 59.012 30.769 0.00 0.00 0.00 2.40
3102 5224 7.181143 ACAAACATGTGAATTTCTTGCAATC 57.819 32.000 0.00 0.00 0.00 2.67
3103 5225 7.927629 ACTACAAACATGTGAATTTCTTGCAAT 59.072 29.630 0.00 0.00 0.00 3.56
3104 5226 7.264221 ACTACAAACATGTGAATTTCTTGCAA 58.736 30.769 0.00 0.00 0.00 4.08
3105 5227 6.804677 ACTACAAACATGTGAATTTCTTGCA 58.195 32.000 0.00 0.00 0.00 4.08
3106 5228 7.698836 AACTACAAACATGTGAATTTCTTGC 57.301 32.000 0.00 0.00 0.00 4.01
3107 5229 9.729023 TGTAACTACAAACATGTGAATTTCTTG 57.271 29.630 0.00 0.36 32.40 3.02
3110 5232 9.891828 TGATGTAACTACAAACATGTGAATTTC 57.108 29.630 0.00 0.00 39.99 2.17
3134 5256 9.323985 CACCCTTGATTAAAGACAAAATTTTGA 57.676 29.630 32.20 13.04 38.00 2.69
3135 5257 8.069574 GCACCCTTGATTAAAGACAAAATTTTG 58.930 33.333 25.73 25.73 38.24 2.44
3136 5258 7.772757 TGCACCCTTGATTAAAGACAAAATTTT 59.227 29.630 0.00 0.00 38.24 1.82
3137 5259 7.226523 GTGCACCCTTGATTAAAGACAAAATTT 59.773 33.333 5.22 0.00 38.24 1.82
3138 5260 6.705825 GTGCACCCTTGATTAAAGACAAAATT 59.294 34.615 5.22 0.00 38.24 1.82
3139 5261 6.183360 TGTGCACCCTTGATTAAAGACAAAAT 60.183 34.615 15.69 0.00 38.24 1.82
3140 5262 5.127845 TGTGCACCCTTGATTAAAGACAAAA 59.872 36.000 15.69 0.00 38.24 2.44
3141 5263 4.646945 TGTGCACCCTTGATTAAAGACAAA 59.353 37.500 15.69 0.00 38.24 2.83
3142 5264 4.211125 TGTGCACCCTTGATTAAAGACAA 58.789 39.130 15.69 0.00 38.24 3.18
3143 5265 3.826524 TGTGCACCCTTGATTAAAGACA 58.173 40.909 15.69 0.00 38.24 3.41
3144 5266 4.278419 AGTTGTGCACCCTTGATTAAAGAC 59.722 41.667 15.69 0.00 38.24 3.01
3145 5267 4.469657 AGTTGTGCACCCTTGATTAAAGA 58.530 39.130 15.69 0.00 38.24 2.52
3146 5268 4.853924 AGTTGTGCACCCTTGATTAAAG 57.146 40.909 15.69 0.00 35.47 1.85
3147 5269 5.127845 TGAAAGTTGTGCACCCTTGATTAAA 59.872 36.000 15.69 0.00 0.00 1.52
3148 5270 4.646945 TGAAAGTTGTGCACCCTTGATTAA 59.353 37.500 15.69 0.00 0.00 1.40
3149 5271 4.211125 TGAAAGTTGTGCACCCTTGATTA 58.789 39.130 15.69 2.04 0.00 1.75
3150 5272 3.030291 TGAAAGTTGTGCACCCTTGATT 58.970 40.909 15.69 1.83 0.00 2.57
3151 5273 2.665165 TGAAAGTTGTGCACCCTTGAT 58.335 42.857 15.69 2.47 0.00 2.57
3152 5274 2.136298 TGAAAGTTGTGCACCCTTGA 57.864 45.000 15.69 4.58 0.00 3.02
3153 5275 2.624838 AGATGAAAGTTGTGCACCCTTG 59.375 45.455 15.69 0.00 0.00 3.61
3154 5276 2.624838 CAGATGAAAGTTGTGCACCCTT 59.375 45.455 15.69 13.42 0.00 3.95
3155 5277 2.158623 TCAGATGAAAGTTGTGCACCCT 60.159 45.455 15.69 7.39 0.00 4.34
3156 5278 2.229792 TCAGATGAAAGTTGTGCACCC 58.770 47.619 15.69 4.81 0.00 4.61
3157 5279 3.066621 TGTTCAGATGAAAGTTGTGCACC 59.933 43.478 15.69 0.00 35.58 5.01
3158 5280 4.291540 TGTTCAGATGAAAGTTGTGCAC 57.708 40.909 10.75 10.75 35.58 4.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.