Multiple sequence alignment - TraesCS7B01G406600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G406600 chr7B 100.000 2849 0 0 1 2849 675308060 675310908 0.000000e+00 5262.0
1 TraesCS7B01G406600 chr7B 85.766 1103 78 11 824 1907 675212709 675213751 0.000000e+00 1094.0
2 TraesCS7B01G406600 chr7B 87.534 738 59 18 2063 2785 675190225 675190944 0.000000e+00 822.0
3 TraesCS7B01G406600 chr7B 86.519 675 52 8 824 1465 675189126 675189794 0.000000e+00 706.0
4 TraesCS7B01G406600 chr7B 91.002 489 41 2 2063 2548 675213839 675214327 0.000000e+00 656.0
5 TraesCS7B01G406600 chr7B 83.333 342 30 8 1570 1907 675189820 675190138 9.990000e-75 291.0
6 TraesCS7B01G406600 chr7A 93.482 1795 77 10 824 2601 689914072 689915843 0.000000e+00 2630.0
7 TraesCS7B01G406600 chr7A 90.877 285 16 5 64 346 63719031 63719307 9.640000e-100 374.0
8 TraesCS7B01G406600 chr7A 90.000 290 24 1 62 346 101429610 101429321 1.250000e-98 370.0
9 TraesCS7B01G406600 chr7A 92.593 54 2 2 2012 2065 673031143 673031092 3.040000e-10 76.8
10 TraesCS7B01G406600 chr7D 90.537 1099 73 5 809 1907 596701043 596702110 0.000000e+00 1424.0
11 TraesCS7B01G406600 chr7D 89.388 801 66 12 2063 2849 596702198 596702993 0.000000e+00 990.0
12 TraesCS7B01G406600 chr7D 90.164 61 3 3 2004 2063 3732646 3732704 3.040000e-10 76.8
13 TraesCS7B01G406600 chr7D 89.831 59 3 3 2007 2065 282229733 282229678 3.940000e-09 73.1
14 TraesCS7B01G406600 chr5B 82.622 633 98 3 824 1448 676113590 676112962 1.490000e-152 549.0
15 TraesCS7B01G406600 chr5B 80.094 427 69 11 2063 2479 544487481 544487901 1.280000e-78 303.0
16 TraesCS7B01G406600 chr4A 82.132 638 101 6 824 1448 636642171 636642808 4.180000e-148 534.0
17 TraesCS7B01G406600 chr4A 81.790 637 100 11 826 1448 637164846 637164212 1.170000e-143 520.0
18 TraesCS7B01G406600 chr4A 91.034 290 21 1 62 346 83669139 83668850 1.240000e-103 387.0
19 TraesCS7B01G406600 chr4A 90.877 285 18 4 65 343 585239604 585239886 2.680000e-100 375.0
20 TraesCS7B01G406600 chr3D 92.199 282 16 2 65 346 473463415 473463140 7.400000e-106 394.0
21 TraesCS7B01G406600 chr2B 91.065 291 19 3 61 346 486334430 486334718 1.240000e-103 387.0
22 TraesCS7B01G406600 chr2A 91.882 271 21 1 74 344 682946108 682945839 7.450000e-101 377.0
23 TraesCS7B01G406600 chr2A 91.379 58 3 2 2008 2065 179285285 179285230 8.460000e-11 78.7
24 TraesCS7B01G406600 chr4B 90.813 283 21 1 65 347 124506731 124506454 9.640000e-100 374.0
25 TraesCS7B01G406600 chr3A 90.459 283 21 3 64 341 34900580 34900861 4.480000e-98 368.0
26 TraesCS7B01G406600 chr3A 81.026 390 30 11 361 741 182636059 182635705 1.300000e-68 270.0
27 TraesCS7B01G406600 chr1A 92.593 54 2 2 2011 2063 269575968 269576020 3.040000e-10 76.8
28 TraesCS7B01G406600 chr3B 94.000 50 1 2 2016 2065 470496100 470496147 1.090000e-09 75.0
29 TraesCS7B01G406600 chr1D 91.228 57 2 3 2011 2065 128471280 128471335 1.090000e-09 75.0
30 TraesCS7B01G406600 chr5A 87.500 64 5 3 2003 2065 46674943 46675004 1.420000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G406600 chr7B 675308060 675310908 2848 False 5262.000000 5262 100.000000 1 2849 1 chr7B.!!$F1 2848
1 TraesCS7B01G406600 chr7B 675212709 675214327 1618 False 875.000000 1094 88.384000 824 2548 2 chr7B.!!$F3 1724
2 TraesCS7B01G406600 chr7B 675189126 675190944 1818 False 606.333333 822 85.795333 824 2785 3 chr7B.!!$F2 1961
3 TraesCS7B01G406600 chr7A 689914072 689915843 1771 False 2630.000000 2630 93.482000 824 2601 1 chr7A.!!$F2 1777
4 TraesCS7B01G406600 chr7D 596701043 596702993 1950 False 1207.000000 1424 89.962500 809 2849 2 chr7D.!!$F2 2040
5 TraesCS7B01G406600 chr5B 676112962 676113590 628 True 549.000000 549 82.622000 824 1448 1 chr5B.!!$R1 624
6 TraesCS7B01G406600 chr4A 636642171 636642808 637 False 534.000000 534 82.132000 824 1448 1 chr4A.!!$F2 624
7 TraesCS7B01G406600 chr4A 637164212 637164846 634 True 520.000000 520 81.790000 826 1448 1 chr4A.!!$R2 622

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
749 750 0.026803 GTTCATTCGTGCCGCAGATC 59.973 55.0 0.0 0.0 0.0 2.75 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2652 2759 0.877743 GTCCCAGCTGAAGAAAGCAC 59.122 55.0 17.39 0.0 46.08 4.4 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 4.272511 TTTTTCCCGGCCCAGCGA 62.273 61.111 0.00 0.00 0.00 4.93
26 27 4.715523 TTTTCCCGGCCCAGCGAG 62.716 66.667 0.00 0.00 0.00 5.03
63 64 4.368756 CGTCTCGCTACTCACAGC 57.631 61.111 0.00 0.00 38.23 4.40
64 65 1.797441 CGTCTCGCTACTCACAGCT 59.203 57.895 0.00 0.00 39.51 4.24
65 66 1.007580 CGTCTCGCTACTCACAGCTA 58.992 55.000 0.00 0.00 39.51 3.32
66 67 1.004398 CGTCTCGCTACTCACAGCTAG 60.004 57.143 0.00 0.00 39.51 3.42
67 68 2.281517 GTCTCGCTACTCACAGCTAGA 58.718 52.381 0.00 0.00 40.06 2.43
68 69 2.281517 TCTCGCTACTCACAGCTAGAC 58.718 52.381 0.00 0.00 38.15 2.59
69 70 1.332375 CTCGCTACTCACAGCTAGACC 59.668 57.143 0.00 0.00 36.67 3.85
70 71 1.065345 TCGCTACTCACAGCTAGACCT 60.065 52.381 0.00 0.00 39.51 3.85
71 72 1.064803 CGCTACTCACAGCTAGACCTG 59.935 57.143 0.00 0.00 39.51 4.00
72 73 2.096248 GCTACTCACAGCTAGACCTGT 58.904 52.381 0.00 0.00 46.47 4.00
73 74 2.494073 GCTACTCACAGCTAGACCTGTT 59.506 50.000 0.00 0.00 43.19 3.16
74 75 3.428316 GCTACTCACAGCTAGACCTGTTC 60.428 52.174 0.00 0.00 43.19 3.18
75 76 2.598565 ACTCACAGCTAGACCTGTTCA 58.401 47.619 0.00 0.00 43.19 3.18
76 77 3.169099 ACTCACAGCTAGACCTGTTCAT 58.831 45.455 0.00 0.00 43.19 2.57
77 78 3.056250 ACTCACAGCTAGACCTGTTCATG 60.056 47.826 0.00 0.00 43.19 3.07
78 79 2.234661 TCACAGCTAGACCTGTTCATGG 59.765 50.000 0.00 0.00 43.19 3.66
79 80 2.234661 CACAGCTAGACCTGTTCATGGA 59.765 50.000 0.00 0.00 43.19 3.41
80 81 2.234908 ACAGCTAGACCTGTTCATGGAC 59.765 50.000 0.00 0.00 43.19 4.02
81 82 2.234661 CAGCTAGACCTGTTCATGGACA 59.765 50.000 6.66 6.66 0.00 4.02
82 83 2.906389 AGCTAGACCTGTTCATGGACAA 59.094 45.455 8.51 0.00 0.00 3.18
83 84 3.003480 GCTAGACCTGTTCATGGACAAC 58.997 50.000 8.51 3.13 0.00 3.32
84 85 2.568623 AGACCTGTTCATGGACAACC 57.431 50.000 8.51 0.31 0.00 3.77
85 86 1.073923 AGACCTGTTCATGGACAACCC 59.926 52.381 8.51 0.00 34.81 4.11
86 87 0.250727 ACCTGTTCATGGACAACCCG 60.251 55.000 8.51 0.00 37.93 5.28
87 88 0.960364 CCTGTTCATGGACAACCCGG 60.960 60.000 8.51 1.80 37.93 5.73
88 89 1.586154 CTGTTCATGGACAACCCGGC 61.586 60.000 8.51 0.00 37.93 6.13
89 90 2.034999 TTCATGGACAACCCGGCC 59.965 61.111 0.00 0.00 37.93 6.13
90 91 3.577334 TTCATGGACAACCCGGCCC 62.577 63.158 0.00 0.00 37.93 5.80
113 114 3.702048 CCTGAACCCGAAGCCCGA 61.702 66.667 0.00 0.00 41.76 5.14
114 115 2.434359 CTGAACCCGAAGCCCGAC 60.434 66.667 0.00 0.00 41.76 4.79
115 116 3.234630 CTGAACCCGAAGCCCGACA 62.235 63.158 0.00 0.00 41.76 4.35
116 117 2.267961 GAACCCGAAGCCCGACAT 59.732 61.111 0.00 0.00 41.76 3.06
117 118 1.376812 GAACCCGAAGCCCGACATT 60.377 57.895 0.00 0.00 41.76 2.71
118 119 1.366854 GAACCCGAAGCCCGACATTC 61.367 60.000 0.00 0.00 41.76 2.67
119 120 2.890474 CCCGAAGCCCGACATTCG 60.890 66.667 8.33 8.33 45.96 3.34
128 129 2.579201 CGACATTCGGTCCAGGCT 59.421 61.111 0.00 0.00 43.95 4.58
129 130 1.519455 CGACATTCGGTCCAGGCTC 60.519 63.158 0.00 0.00 43.95 4.70
130 131 1.519455 GACATTCGGTCCAGGCTCG 60.519 63.158 0.00 0.00 40.83 5.03
131 132 2.202932 CATTCGGTCCAGGCTCGG 60.203 66.667 0.00 0.00 0.00 4.63
132 133 3.470888 ATTCGGTCCAGGCTCGGG 61.471 66.667 3.64 0.00 0.00 5.14
140 141 3.710722 CAGGCTCGGGCTCCACTT 61.711 66.667 7.48 0.00 35.88 3.16
141 142 2.930562 AGGCTCGGGCTCCACTTT 60.931 61.111 7.48 0.00 38.73 2.66
142 143 2.436824 GGCTCGGGCTCCACTTTC 60.437 66.667 7.48 0.00 38.73 2.62
143 144 2.665603 GCTCGGGCTCCACTTTCT 59.334 61.111 0.00 0.00 35.22 2.52
144 145 1.743252 GCTCGGGCTCCACTTTCTG 60.743 63.158 0.00 0.00 35.22 3.02
145 146 1.975327 CTCGGGCTCCACTTTCTGA 59.025 57.895 0.00 0.00 0.00 3.27
146 147 0.390472 CTCGGGCTCCACTTTCTGAC 60.390 60.000 0.00 0.00 0.00 3.51
147 148 1.376037 CGGGCTCCACTTTCTGACC 60.376 63.158 0.00 0.00 0.00 4.02
148 149 1.002011 GGGCTCCACTTTCTGACCC 60.002 63.158 0.00 0.00 0.00 4.46
149 150 1.376037 GGCTCCACTTTCTGACCCG 60.376 63.158 0.00 0.00 0.00 5.28
150 151 1.671742 GCTCCACTTTCTGACCCGA 59.328 57.895 0.00 0.00 0.00 5.14
151 152 0.034896 GCTCCACTTTCTGACCCGAA 59.965 55.000 0.00 0.00 0.00 4.30
152 153 1.941668 GCTCCACTTTCTGACCCGAAG 60.942 57.143 0.00 0.00 0.00 3.79
153 154 0.034896 TCCACTTTCTGACCCGAAGC 59.965 55.000 0.00 0.00 0.00 3.86
154 155 0.955919 CCACTTTCTGACCCGAAGCC 60.956 60.000 0.00 0.00 0.00 4.35
155 156 0.955919 CACTTTCTGACCCGAAGCCC 60.956 60.000 0.00 0.00 0.00 5.19
156 157 1.741770 CTTTCTGACCCGAAGCCCG 60.742 63.158 0.00 0.00 38.18 6.13
157 158 2.167398 CTTTCTGACCCGAAGCCCGA 62.167 60.000 0.00 0.00 41.76 5.14
158 159 2.444700 TTTCTGACCCGAAGCCCGAC 62.445 60.000 0.00 0.00 41.76 4.79
159 160 4.452733 CTGACCCGAAGCCCGACC 62.453 72.222 0.00 0.00 41.76 4.79
164 165 4.382320 CCGAAGCCCGACCCGAAA 62.382 66.667 0.00 0.00 41.76 3.46
165 166 2.813908 CGAAGCCCGACCCGAAAG 60.814 66.667 0.00 0.00 41.76 2.62
166 167 3.125573 GAAGCCCGACCCGAAAGC 61.126 66.667 0.00 0.00 0.00 3.51
167 168 4.717313 AAGCCCGACCCGAAAGCC 62.717 66.667 0.00 0.00 0.00 4.35
171 172 4.382320 CCGACCCGAAAGCCCGAA 62.382 66.667 0.00 0.00 0.00 4.30
172 173 2.125269 CGACCCGAAAGCCCGAAT 60.125 61.111 0.00 0.00 0.00 3.34
173 174 1.142314 CGACCCGAAAGCCCGAATA 59.858 57.895 0.00 0.00 0.00 1.75
174 175 0.460635 CGACCCGAAAGCCCGAATAA 60.461 55.000 0.00 0.00 0.00 1.40
175 176 1.741528 GACCCGAAAGCCCGAATAAA 58.258 50.000 0.00 0.00 0.00 1.40
176 177 1.669265 GACCCGAAAGCCCGAATAAAG 59.331 52.381 0.00 0.00 0.00 1.85
177 178 0.380733 CCCGAAAGCCCGAATAAAGC 59.619 55.000 0.00 0.00 0.00 3.51
178 179 0.380733 CCGAAAGCCCGAATAAAGCC 59.619 55.000 0.00 0.00 0.00 4.35
179 180 0.380733 CGAAAGCCCGAATAAAGCCC 59.619 55.000 0.00 0.00 0.00 5.19
180 181 0.380733 GAAAGCCCGAATAAAGCCCG 59.619 55.000 0.00 0.00 0.00 6.13
181 182 0.034863 AAAGCCCGAATAAAGCCCGA 60.035 50.000 0.00 0.00 0.00 5.14
182 183 0.034863 AAGCCCGAATAAAGCCCGAA 60.035 50.000 0.00 0.00 0.00 4.30
183 184 0.034863 AGCCCGAATAAAGCCCGAAA 60.035 50.000 0.00 0.00 0.00 3.46
184 185 1.029681 GCCCGAATAAAGCCCGAAAT 58.970 50.000 0.00 0.00 0.00 2.17
185 186 1.269051 GCCCGAATAAAGCCCGAAATG 60.269 52.381 0.00 0.00 0.00 2.32
186 187 2.021457 CCCGAATAAAGCCCGAAATGT 58.979 47.619 0.00 0.00 0.00 2.71
187 188 3.207778 CCCGAATAAAGCCCGAAATGTA 58.792 45.455 0.00 0.00 0.00 2.29
188 189 3.818773 CCCGAATAAAGCCCGAAATGTAT 59.181 43.478 0.00 0.00 0.00 2.29
189 190 4.998672 CCCGAATAAAGCCCGAAATGTATA 59.001 41.667 0.00 0.00 0.00 1.47
190 191 5.646360 CCCGAATAAAGCCCGAAATGTATAT 59.354 40.000 0.00 0.00 0.00 0.86
191 192 6.819649 CCCGAATAAAGCCCGAAATGTATATA 59.180 38.462 0.00 0.00 0.00 0.86
192 193 7.497909 CCCGAATAAAGCCCGAAATGTATATAT 59.502 37.037 0.00 0.00 0.00 0.86
193 194 9.537192 CCGAATAAAGCCCGAAATGTATATATA 57.463 33.333 0.00 0.00 0.00 0.86
287 288 5.845985 AATGTCACTGTTCATGTACTTCG 57.154 39.130 4.01 0.00 0.00 3.79
288 289 3.649073 TGTCACTGTTCATGTACTTCGG 58.351 45.455 4.01 0.00 0.00 4.30
289 290 2.993899 GTCACTGTTCATGTACTTCGGG 59.006 50.000 4.01 0.00 0.00 5.14
290 291 1.732259 CACTGTTCATGTACTTCGGGC 59.268 52.381 4.01 0.00 0.00 6.13
291 292 1.338769 ACTGTTCATGTACTTCGGGCC 60.339 52.381 0.00 0.00 0.00 5.80
292 293 0.687920 TGTTCATGTACTTCGGGCCA 59.312 50.000 4.39 0.00 0.00 5.36
293 294 1.338674 TGTTCATGTACTTCGGGCCAG 60.339 52.381 4.39 0.00 0.00 4.85
294 295 0.251916 TTCATGTACTTCGGGCCAGG 59.748 55.000 4.39 0.00 0.00 4.45
295 296 1.819632 CATGTACTTCGGGCCAGGC 60.820 63.158 4.39 1.26 0.00 4.85
314 315 4.129148 GGGCTCGGGCTTGGGATT 62.129 66.667 7.48 0.00 38.73 3.01
315 316 2.043953 GGCTCGGGCTTGGGATTT 60.044 61.111 7.48 0.00 38.73 2.17
316 317 1.682344 GGCTCGGGCTTGGGATTTT 60.682 57.895 7.48 0.00 38.73 1.82
317 318 1.257750 GGCTCGGGCTTGGGATTTTT 61.258 55.000 7.48 0.00 38.73 1.94
343 344 3.373565 CTTTGTCAAGCCCGGCCC 61.374 66.667 5.55 0.00 0.00 5.80
350 351 4.360405 AAGCCCGGCCCGACAAAT 62.360 61.111 3.71 0.00 0.00 2.32
351 352 4.796495 AGCCCGGCCCGACAAATC 62.796 66.667 3.71 0.00 0.00 2.17
353 354 2.124320 CCCGGCCCGACAAATCAT 60.124 61.111 3.71 0.00 0.00 2.45
354 355 2.186826 CCCGGCCCGACAAATCATC 61.187 63.158 3.71 0.00 0.00 2.92
355 356 1.451207 CCGGCCCGACAAATCATCA 60.451 57.895 3.71 0.00 0.00 3.07
356 357 1.439353 CCGGCCCGACAAATCATCAG 61.439 60.000 3.71 0.00 0.00 2.90
357 358 1.439353 CGGCCCGACAAATCATCAGG 61.439 60.000 0.00 0.00 0.00 3.86
358 359 0.394352 GGCCCGACAAATCATCAGGT 60.394 55.000 0.00 0.00 0.00 4.00
359 360 1.463674 GCCCGACAAATCATCAGGTT 58.536 50.000 0.00 0.00 0.00 3.50
360 361 1.818674 GCCCGACAAATCATCAGGTTT 59.181 47.619 0.00 0.00 0.00 3.27
361 362 3.013921 GCCCGACAAATCATCAGGTTTA 58.986 45.455 0.00 0.00 0.00 2.01
362 363 3.181500 GCCCGACAAATCATCAGGTTTAC 60.181 47.826 0.00 0.00 0.00 2.01
363 364 4.261801 CCCGACAAATCATCAGGTTTACT 58.738 43.478 0.00 0.00 0.00 2.24
364 365 4.332819 CCCGACAAATCATCAGGTTTACTC 59.667 45.833 0.00 0.00 0.00 2.59
365 366 4.935205 CCGACAAATCATCAGGTTTACTCA 59.065 41.667 0.00 0.00 0.00 3.41
366 367 5.163854 CCGACAAATCATCAGGTTTACTCAC 60.164 44.000 0.00 0.00 0.00 3.51
367 368 5.408299 CGACAAATCATCAGGTTTACTCACA 59.592 40.000 0.00 0.00 0.00 3.58
368 369 6.401474 CGACAAATCATCAGGTTTACTCACAG 60.401 42.308 0.00 0.00 0.00 3.66
369 370 5.182001 ACAAATCATCAGGTTTACTCACAGC 59.818 40.000 0.00 0.00 0.00 4.40
370 371 3.334583 TCATCAGGTTTACTCACAGCC 57.665 47.619 0.00 0.00 0.00 4.85
371 372 2.637382 TCATCAGGTTTACTCACAGCCA 59.363 45.455 0.00 0.00 0.00 4.75
372 373 3.072330 TCATCAGGTTTACTCACAGCCAA 59.928 43.478 0.00 0.00 0.00 4.52
373 374 3.126001 TCAGGTTTACTCACAGCCAAG 57.874 47.619 0.00 0.00 0.00 3.61
374 375 1.537202 CAGGTTTACTCACAGCCAAGC 59.463 52.381 0.00 0.00 0.00 4.01
375 376 0.517316 GGTTTACTCACAGCCAAGCG 59.483 55.000 0.00 0.00 0.00 4.68
376 377 0.110192 GTTTACTCACAGCCAAGCGC 60.110 55.000 0.00 0.00 37.98 5.92
377 378 1.565156 TTTACTCACAGCCAAGCGCG 61.565 55.000 0.00 0.00 44.76 6.86
378 379 2.428960 TTACTCACAGCCAAGCGCGA 62.429 55.000 12.10 0.00 44.76 5.87
379 380 2.428960 TACTCACAGCCAAGCGCGAA 62.429 55.000 12.10 0.00 44.76 4.70
380 381 3.300667 CTCACAGCCAAGCGCGAAC 62.301 63.158 12.10 0.00 44.76 3.95
381 382 4.389576 CACAGCCAAGCGCGAACC 62.390 66.667 12.10 0.00 44.76 3.62
384 385 3.702048 AGCCAAGCGCGAACCCTA 61.702 61.111 12.10 0.00 44.76 3.53
385 386 3.195698 GCCAAGCGCGAACCCTAG 61.196 66.667 12.10 0.00 0.00 3.02
386 387 2.511600 CCAAGCGCGAACCCTAGG 60.512 66.667 12.10 0.06 0.00 3.02
387 388 2.577059 CAAGCGCGAACCCTAGGA 59.423 61.111 12.10 0.00 0.00 2.94
388 389 1.079405 CAAGCGCGAACCCTAGGAA 60.079 57.895 12.10 0.00 0.00 3.36
389 390 1.079336 AAGCGCGAACCCTAGGAAC 60.079 57.895 12.10 0.00 0.00 3.62
390 391 2.510918 GCGCGAACCCTAGGAACC 60.511 66.667 12.10 0.00 0.00 3.62
391 392 2.202703 CGCGAACCCTAGGAACCG 60.203 66.667 11.48 11.07 0.00 4.44
392 393 2.703798 CGCGAACCCTAGGAACCGA 61.704 63.158 11.48 0.00 0.00 4.69
393 394 1.593265 GCGAACCCTAGGAACCGAA 59.407 57.895 11.48 0.00 0.00 4.30
394 395 0.037046 GCGAACCCTAGGAACCGAAA 60.037 55.000 11.48 0.00 0.00 3.46
395 396 1.608801 GCGAACCCTAGGAACCGAAAA 60.609 52.381 11.48 0.00 0.00 2.29
396 397 2.071540 CGAACCCTAGGAACCGAAAAC 58.928 52.381 11.48 0.00 0.00 2.43
397 398 2.071540 GAACCCTAGGAACCGAAAACG 58.928 52.381 11.48 0.00 0.00 3.60
398 399 0.321034 ACCCTAGGAACCGAAAACGC 60.321 55.000 11.48 0.00 0.00 4.84
399 400 1.022982 CCCTAGGAACCGAAAACGCC 61.023 60.000 11.48 0.00 0.00 5.68
400 401 1.022982 CCTAGGAACCGAAAACGCCC 61.023 60.000 1.05 0.00 0.00 6.13
401 402 1.356527 CTAGGAACCGAAAACGCCCG 61.357 60.000 0.00 0.00 0.00 6.13
406 407 3.116531 CCGAAAACGCCCGGTCTC 61.117 66.667 0.00 0.00 40.78 3.36
407 408 2.048503 CGAAAACGCCCGGTCTCT 60.049 61.111 0.00 0.00 0.00 3.10
408 409 2.092882 CGAAAACGCCCGGTCTCTC 61.093 63.158 0.00 0.00 0.00 3.20
409 410 1.292541 GAAAACGCCCGGTCTCTCT 59.707 57.895 0.00 0.00 0.00 3.10
410 411 0.736672 GAAAACGCCCGGTCTCTCTC 60.737 60.000 0.00 0.00 0.00 3.20
411 412 2.488087 AAAACGCCCGGTCTCTCTCG 62.488 60.000 0.00 0.00 0.00 4.04
412 413 4.719106 ACGCCCGGTCTCTCTCGT 62.719 66.667 0.00 0.00 0.00 4.18
413 414 3.878519 CGCCCGGTCTCTCTCGTC 61.879 72.222 0.00 0.00 0.00 4.20
414 415 2.438795 GCCCGGTCTCTCTCGTCT 60.439 66.667 0.00 0.00 0.00 4.18
415 416 2.474612 GCCCGGTCTCTCTCGTCTC 61.475 68.421 0.00 0.00 0.00 3.36
416 417 1.222387 CCCGGTCTCTCTCGTCTCT 59.778 63.158 0.00 0.00 0.00 3.10
417 418 0.393267 CCCGGTCTCTCTCGTCTCTT 60.393 60.000 0.00 0.00 0.00 2.85
418 419 1.011333 CCGGTCTCTCTCGTCTCTTC 58.989 60.000 0.00 0.00 0.00 2.87
419 420 1.011333 CGGTCTCTCTCGTCTCTTCC 58.989 60.000 0.00 0.00 0.00 3.46
420 421 1.406341 CGGTCTCTCTCGTCTCTTCCT 60.406 57.143 0.00 0.00 0.00 3.36
421 422 2.285977 GGTCTCTCTCGTCTCTTCCTC 58.714 57.143 0.00 0.00 0.00 3.71
422 423 2.285977 GTCTCTCTCGTCTCTTCCTCC 58.714 57.143 0.00 0.00 0.00 4.30
423 424 1.210967 TCTCTCTCGTCTCTTCCTCCC 59.789 57.143 0.00 0.00 0.00 4.30
424 425 0.256464 TCTCTCGTCTCTTCCTCCCC 59.744 60.000 0.00 0.00 0.00 4.81
425 426 0.033991 CTCTCGTCTCTTCCTCCCCA 60.034 60.000 0.00 0.00 0.00 4.96
426 427 0.408309 TCTCGTCTCTTCCTCCCCAA 59.592 55.000 0.00 0.00 0.00 4.12
427 428 1.203137 TCTCGTCTCTTCCTCCCCAAA 60.203 52.381 0.00 0.00 0.00 3.28
428 429 1.834263 CTCGTCTCTTCCTCCCCAAAT 59.166 52.381 0.00 0.00 0.00 2.32
429 430 1.831736 TCGTCTCTTCCTCCCCAAATC 59.168 52.381 0.00 0.00 0.00 2.17
430 431 1.134371 CGTCTCTTCCTCCCCAAATCC 60.134 57.143 0.00 0.00 0.00 3.01
431 432 1.213182 GTCTCTTCCTCCCCAAATCCC 59.787 57.143 0.00 0.00 0.00 3.85
432 433 1.082879 TCTCTTCCTCCCCAAATCCCT 59.917 52.381 0.00 0.00 0.00 4.20
433 434 1.925959 CTCTTCCTCCCCAAATCCCTT 59.074 52.381 0.00 0.00 0.00 3.95
434 435 2.313041 CTCTTCCTCCCCAAATCCCTTT 59.687 50.000 0.00 0.00 0.00 3.11
435 436 2.311841 TCTTCCTCCCCAAATCCCTTTC 59.688 50.000 0.00 0.00 0.00 2.62
436 437 1.007607 TCCTCCCCAAATCCCTTTCC 58.992 55.000 0.00 0.00 0.00 3.13
437 438 0.032117 CCTCCCCAAATCCCTTTCCC 60.032 60.000 0.00 0.00 0.00 3.97
438 439 0.709992 CTCCCCAAATCCCTTTCCCA 59.290 55.000 0.00 0.00 0.00 4.37
439 440 0.411848 TCCCCAAATCCCTTTCCCAC 59.588 55.000 0.00 0.00 0.00 4.61
440 441 0.116143 CCCCAAATCCCTTTCCCACA 59.884 55.000 0.00 0.00 0.00 4.17
441 442 1.484065 CCCCAAATCCCTTTCCCACAA 60.484 52.381 0.00 0.00 0.00 3.33
442 443 2.334023 CCCAAATCCCTTTCCCACAAA 58.666 47.619 0.00 0.00 0.00 2.83
443 444 2.708325 CCCAAATCCCTTTCCCACAAAA 59.292 45.455 0.00 0.00 0.00 2.44
444 445 3.137360 CCCAAATCCCTTTCCCACAAAAA 59.863 43.478 0.00 0.00 0.00 1.94
511 512 4.796495 GCGGCGAATCCACCCCTT 62.796 66.667 12.98 0.00 34.01 3.95
512 513 2.824041 CGGCGAATCCACCCCTTG 60.824 66.667 0.00 0.00 34.01 3.61
513 514 3.140814 GGCGAATCCACCCCTTGC 61.141 66.667 0.00 0.00 34.01 4.01
514 515 3.140814 GCGAATCCACCCCTTGCC 61.141 66.667 0.00 0.00 0.00 4.52
515 516 2.677228 CGAATCCACCCCTTGCCT 59.323 61.111 0.00 0.00 0.00 4.75
516 517 1.452108 CGAATCCACCCCTTGCCTC 60.452 63.158 0.00 0.00 0.00 4.70
517 518 1.915078 CGAATCCACCCCTTGCCTCT 61.915 60.000 0.00 0.00 0.00 3.69
518 519 0.106967 GAATCCACCCCTTGCCTCTC 60.107 60.000 0.00 0.00 0.00 3.20
519 520 0.551131 AATCCACCCCTTGCCTCTCT 60.551 55.000 0.00 0.00 0.00 3.10
520 521 1.277580 ATCCACCCCTTGCCTCTCTG 61.278 60.000 0.00 0.00 0.00 3.35
521 522 2.227036 CCACCCCTTGCCTCTCTGT 61.227 63.158 0.00 0.00 0.00 3.41
522 523 1.298014 CACCCCTTGCCTCTCTGTC 59.702 63.158 0.00 0.00 0.00 3.51
523 524 1.159664 ACCCCTTGCCTCTCTGTCT 59.840 57.895 0.00 0.00 0.00 3.41
524 525 0.413832 ACCCCTTGCCTCTCTGTCTA 59.586 55.000 0.00 0.00 0.00 2.59
525 526 1.118838 CCCCTTGCCTCTCTGTCTAG 58.881 60.000 0.00 0.00 0.00 2.43
526 527 0.463620 CCCTTGCCTCTCTGTCTAGC 59.536 60.000 0.00 0.00 0.00 3.42
527 528 1.484038 CCTTGCCTCTCTGTCTAGCT 58.516 55.000 0.00 0.00 0.00 3.32
528 529 1.136695 CCTTGCCTCTCTGTCTAGCTG 59.863 57.143 0.00 0.00 0.00 4.24
529 530 0.534412 TTGCCTCTCTGTCTAGCTGC 59.466 55.000 0.00 0.00 0.00 5.25
530 531 1.065600 GCCTCTCTGTCTAGCTGCG 59.934 63.158 0.00 0.00 0.00 5.18
531 532 1.732917 CCTCTCTGTCTAGCTGCGG 59.267 63.158 0.00 0.00 0.00 5.69
532 533 0.749818 CCTCTCTGTCTAGCTGCGGA 60.750 60.000 0.00 0.00 0.00 5.54
533 534 0.662619 CTCTCTGTCTAGCTGCGGAG 59.337 60.000 13.93 13.93 38.96 4.63
534 535 0.034960 TCTCTGTCTAGCTGCGGAGT 60.035 55.000 17.39 0.00 38.77 3.85
535 536 0.100325 CTCTGTCTAGCTGCGGAGTG 59.900 60.000 5.62 0.00 34.38 3.51
536 537 1.140589 CTGTCTAGCTGCGGAGTGG 59.859 63.158 5.62 0.00 0.00 4.00
537 538 1.304134 TGTCTAGCTGCGGAGTGGA 60.304 57.895 5.62 0.00 0.00 4.02
538 539 1.139947 GTCTAGCTGCGGAGTGGAC 59.860 63.158 5.62 7.92 0.00 4.02
539 540 2.103143 CTAGCTGCGGAGTGGACG 59.897 66.667 5.62 0.00 0.00 4.79
540 541 2.675423 TAGCTGCGGAGTGGACGT 60.675 61.111 5.62 0.00 0.00 4.34
541 542 2.874010 CTAGCTGCGGAGTGGACGTG 62.874 65.000 5.62 0.00 0.00 4.49
543 544 4.363990 CTGCGGAGTGGACGTGCT 62.364 66.667 8.99 0.00 0.00 4.40
544 545 4.357947 TGCGGAGTGGACGTGCTC 62.358 66.667 8.99 4.55 0.00 4.26
545 546 4.057428 GCGGAGTGGACGTGCTCT 62.057 66.667 11.60 11.60 32.67 4.09
546 547 2.179517 CGGAGTGGACGTGCTCTC 59.820 66.667 25.34 25.34 32.67 3.20
547 548 2.179517 GGAGTGGACGTGCTCTCG 59.820 66.667 25.94 0.00 32.67 4.04
548 549 2.505118 GAGTGGACGTGCTCTCGC 60.505 66.667 20.73 3.10 0.00 5.03
549 550 3.973267 GAGTGGACGTGCTCTCGCC 62.973 68.421 20.73 1.86 34.43 5.54
550 551 4.057428 GTGGACGTGCTCTCGCCT 62.057 66.667 8.99 0.00 34.43 5.52
551 552 3.749064 TGGACGTGCTCTCGCCTC 61.749 66.667 8.99 0.00 34.43 4.70
552 553 3.444805 GGACGTGCTCTCGCCTCT 61.445 66.667 0.00 0.00 34.43 3.69
553 554 2.569134 GACGTGCTCTCGCCTCTT 59.431 61.111 0.00 0.00 34.43 2.85
554 555 1.515304 GACGTGCTCTCGCCTCTTC 60.515 63.158 0.00 0.00 34.43 2.87
555 556 2.201436 GACGTGCTCTCGCCTCTTCA 62.201 60.000 0.00 0.00 34.43 3.02
556 557 1.803519 CGTGCTCTCGCCTCTTCAC 60.804 63.158 0.00 0.00 34.43 3.18
557 558 1.803519 GTGCTCTCGCCTCTTCACG 60.804 63.158 0.00 0.00 34.43 4.35
558 559 2.202676 GCTCTCGCCTCTTCACGG 60.203 66.667 0.00 0.00 0.00 4.94
559 560 2.202676 CTCTCGCCTCTTCACGGC 60.203 66.667 0.00 0.00 44.11 5.68
560 561 3.708220 CTCTCGCCTCTTCACGGCC 62.708 68.421 0.00 0.00 44.73 6.13
561 562 3.764466 CTCGCCTCTTCACGGCCT 61.764 66.667 0.00 0.00 44.73 5.19
562 563 3.708220 CTCGCCTCTTCACGGCCTC 62.708 68.421 0.00 0.00 44.73 4.70
564 565 4.821589 GCCTCTTCACGGCCTCGG 62.822 72.222 0.00 0.00 41.73 4.63
565 566 4.821589 CCTCTTCACGGCCTCGGC 62.822 72.222 0.00 0.00 41.39 5.54
566 567 4.069232 CTCTTCACGGCCTCGGCA 62.069 66.667 10.51 0.00 44.11 5.69
567 568 3.997064 CTCTTCACGGCCTCGGCAG 62.997 68.421 10.51 8.47 44.11 4.85
582 583 4.767255 CAGTGGGGCGCTCTCACC 62.767 72.222 20.77 8.05 32.29 4.02
587 588 4.864334 GGGCGCTCTCACCCATGG 62.864 72.222 7.64 4.14 46.22 3.66
590 591 4.457496 CGCTCTCACCCATGGCGT 62.457 66.667 6.09 2.76 40.78 5.68
591 592 2.512515 GCTCTCACCCATGGCGTC 60.513 66.667 6.09 0.00 0.00 5.19
592 593 3.023949 GCTCTCACCCATGGCGTCT 62.024 63.158 6.09 0.00 0.00 4.18
593 594 1.153489 CTCTCACCCATGGCGTCTG 60.153 63.158 6.09 0.00 0.00 3.51
594 595 1.892819 CTCTCACCCATGGCGTCTGT 61.893 60.000 6.09 0.00 0.00 3.41
595 596 1.003355 CTCACCCATGGCGTCTGTT 60.003 57.895 6.09 0.00 0.00 3.16
596 597 1.300971 CTCACCCATGGCGTCTGTTG 61.301 60.000 6.09 0.00 0.00 3.33
597 598 2.672996 ACCCATGGCGTCTGTTGC 60.673 61.111 6.09 0.00 0.00 4.17
598 599 2.672651 CCCATGGCGTCTGTTGCA 60.673 61.111 6.09 0.00 0.00 4.08
599 600 2.267351 CCCATGGCGTCTGTTGCAA 61.267 57.895 6.09 0.00 0.00 4.08
600 601 1.210931 CCATGGCGTCTGTTGCAAG 59.789 57.895 0.00 0.00 0.00 4.01
601 602 1.210931 CATGGCGTCTGTTGCAAGG 59.789 57.895 0.00 0.00 0.00 3.61
602 603 1.973281 ATGGCGTCTGTTGCAAGGG 60.973 57.895 0.00 0.00 0.00 3.95
603 604 3.365265 GGCGTCTGTTGCAAGGGG 61.365 66.667 0.00 0.00 0.00 4.79
604 605 3.365265 GCGTCTGTTGCAAGGGGG 61.365 66.667 0.00 0.00 0.00 5.40
605 606 2.429930 CGTCTGTTGCAAGGGGGA 59.570 61.111 0.00 0.00 0.00 4.81
606 607 1.002134 CGTCTGTTGCAAGGGGGAT 60.002 57.895 0.00 0.00 0.00 3.85
607 608 1.308069 CGTCTGTTGCAAGGGGGATG 61.308 60.000 0.00 0.00 0.00 3.51
608 609 0.967380 GTCTGTTGCAAGGGGGATGG 60.967 60.000 0.00 0.00 0.00 3.51
609 610 1.683365 CTGTTGCAAGGGGGATGGG 60.683 63.158 0.00 0.00 0.00 4.00
610 611 2.364186 GTTGCAAGGGGGATGGGG 60.364 66.667 0.00 0.00 0.00 4.96
611 612 4.397010 TTGCAAGGGGGATGGGGC 62.397 66.667 0.00 0.00 0.00 5.80
632 633 4.081030 GCGATGCCGATGCCGATG 62.081 66.667 0.00 0.00 38.22 3.84
633 634 3.417224 CGATGCCGATGCCGATGG 61.417 66.667 0.00 0.00 38.22 3.51
643 644 3.896133 GCCGATGGCGACCTACGA 61.896 66.667 12.99 0.00 45.77 3.43
644 645 2.802792 CCGATGGCGACCTACGAA 59.197 61.111 12.99 0.00 45.77 3.85
645 646 1.588139 CCGATGGCGACCTACGAAC 60.588 63.158 12.99 0.00 45.77 3.95
646 647 1.138036 CGATGGCGACCTACGAACA 59.862 57.895 0.00 0.00 45.77 3.18
647 648 0.866061 CGATGGCGACCTACGAACAG 60.866 60.000 0.00 0.00 45.77 3.16
648 649 0.172803 GATGGCGACCTACGAACAGT 59.827 55.000 0.00 0.00 45.77 3.55
649 650 1.402968 GATGGCGACCTACGAACAGTA 59.597 52.381 0.00 0.00 45.77 2.74
650 651 5.898911 CGATGGCGACCTACGAACAGTAG 62.899 56.522 0.00 0.00 45.18 2.57
657 658 2.510768 CTACGAACAGTAGGGATGGC 57.489 55.000 0.00 0.00 46.93 4.40
658 659 2.032620 CTACGAACAGTAGGGATGGCT 58.967 52.381 0.00 0.00 46.93 4.75
659 660 0.537188 ACGAACAGTAGGGATGGCTG 59.463 55.000 0.00 0.00 36.41 4.85
660 661 0.537188 CGAACAGTAGGGATGGCTGT 59.463 55.000 0.00 0.00 44.31 4.40
661 662 1.471676 CGAACAGTAGGGATGGCTGTC 60.472 57.143 0.00 0.00 41.94 3.51
662 663 0.537188 AACAGTAGGGATGGCTGTCG 59.463 55.000 0.00 0.00 41.94 4.35
663 664 0.614979 ACAGTAGGGATGGCTGTCGT 60.615 55.000 0.00 0.00 38.96 4.34
664 665 0.103208 CAGTAGGGATGGCTGTCGTC 59.897 60.000 0.00 0.00 0.00 4.20
665 666 1.065928 GTAGGGATGGCTGTCGTCG 59.934 63.158 0.00 0.00 32.24 5.12
666 667 2.782222 TAGGGATGGCTGTCGTCGC 61.782 63.158 10.22 10.22 42.58 5.19
676 677 4.430765 GTCGTCGCCGGTGTCCAT 62.431 66.667 16.01 0.00 33.95 3.41
677 678 4.429212 TCGTCGCCGGTGTCCATG 62.429 66.667 16.01 1.09 33.95 3.66
685 686 4.722700 GGTGTCCATGGCGCAGGT 62.723 66.667 10.83 0.00 0.00 4.00
686 687 3.127533 GTGTCCATGGCGCAGGTC 61.128 66.667 10.83 6.40 0.00 3.85
687 688 3.635191 TGTCCATGGCGCAGGTCA 61.635 61.111 10.83 9.17 0.00 4.02
688 689 2.124570 GTCCATGGCGCAGGTCAT 60.125 61.111 10.83 0.00 39.62 3.06
705 706 7.361889 CAGGTCATGCATCTTAATCTATCAC 57.638 40.000 0.00 0.00 0.00 3.06
706 707 6.370994 CAGGTCATGCATCTTAATCTATCACC 59.629 42.308 0.00 0.00 0.00 4.02
707 708 5.349817 GGTCATGCATCTTAATCTATCACCG 59.650 44.000 0.00 0.00 0.00 4.94
708 709 5.928839 GTCATGCATCTTAATCTATCACCGT 59.071 40.000 0.00 0.00 0.00 4.83
709 710 6.090088 GTCATGCATCTTAATCTATCACCGTC 59.910 42.308 0.00 0.00 0.00 4.79
710 711 4.546570 TGCATCTTAATCTATCACCGTCG 58.453 43.478 0.00 0.00 0.00 5.12
711 712 3.921021 GCATCTTAATCTATCACCGTCGG 59.079 47.826 10.48 10.48 0.00 4.79
712 713 3.637998 TCTTAATCTATCACCGTCGGC 57.362 47.619 12.28 0.00 0.00 5.54
713 714 2.295349 TCTTAATCTATCACCGTCGGCC 59.705 50.000 12.28 0.00 0.00 6.13
714 715 1.694844 TAATCTATCACCGTCGGCCA 58.305 50.000 12.28 0.00 0.00 5.36
715 716 0.389391 AATCTATCACCGTCGGCCAG 59.611 55.000 12.28 1.48 0.00 4.85
716 717 1.464376 ATCTATCACCGTCGGCCAGG 61.464 60.000 12.28 5.31 0.00 4.45
717 718 3.151710 TATCACCGTCGGCCAGGG 61.152 66.667 12.28 7.97 35.97 4.45
729 730 3.790437 CCAGGGCAGAGCGGATGT 61.790 66.667 0.00 0.00 0.00 3.06
730 731 2.513204 CAGGGCAGAGCGGATGTG 60.513 66.667 0.00 0.00 0.00 3.21
731 732 3.005539 AGGGCAGAGCGGATGTGT 61.006 61.111 0.00 0.00 0.00 3.72
732 733 2.045926 GGGCAGAGCGGATGTGTT 60.046 61.111 0.00 0.00 0.00 3.32
733 734 2.109126 GGGCAGAGCGGATGTGTTC 61.109 63.158 0.00 0.00 0.00 3.18
734 735 1.375908 GGCAGAGCGGATGTGTTCA 60.376 57.895 0.00 0.00 0.00 3.18
735 736 0.745845 GGCAGAGCGGATGTGTTCAT 60.746 55.000 0.00 0.00 36.95 2.57
736 737 1.089920 GCAGAGCGGATGTGTTCATT 58.910 50.000 0.00 0.00 34.06 2.57
737 738 1.063174 GCAGAGCGGATGTGTTCATTC 59.937 52.381 0.00 0.00 34.06 2.67
741 742 3.586039 CGGATGTGTTCATTCGTGC 57.414 52.632 1.32 0.00 45.07 5.34
742 743 0.096976 CGGATGTGTTCATTCGTGCC 59.903 55.000 1.32 0.00 45.07 5.01
743 744 0.096976 GGATGTGTTCATTCGTGCCG 59.903 55.000 0.00 0.00 34.06 5.69
744 745 0.521242 GATGTGTTCATTCGTGCCGC 60.521 55.000 0.00 0.00 34.06 6.53
745 746 1.233950 ATGTGTTCATTCGTGCCGCA 61.234 50.000 0.00 0.00 0.00 5.69
746 747 1.154413 GTGTTCATTCGTGCCGCAG 60.154 57.895 0.00 0.00 0.00 5.18
747 748 1.301322 TGTTCATTCGTGCCGCAGA 60.301 52.632 0.00 0.00 0.00 4.26
748 749 0.673333 TGTTCATTCGTGCCGCAGAT 60.673 50.000 0.00 0.00 0.00 2.90
749 750 0.026803 GTTCATTCGTGCCGCAGATC 59.973 55.000 0.00 0.00 0.00 2.75
750 751 0.108186 TTCATTCGTGCCGCAGATCT 60.108 50.000 0.00 0.00 0.00 2.75
751 752 0.744281 TCATTCGTGCCGCAGATCTA 59.256 50.000 0.00 0.00 0.00 1.98
752 753 1.136110 TCATTCGTGCCGCAGATCTAA 59.864 47.619 0.00 0.00 0.00 2.10
753 754 2.138320 CATTCGTGCCGCAGATCTAAT 58.862 47.619 0.00 0.00 0.00 1.73
754 755 1.570813 TTCGTGCCGCAGATCTAATG 58.429 50.000 0.00 0.00 0.00 1.90
755 756 0.875908 TCGTGCCGCAGATCTAATGC 60.876 55.000 0.00 0.00 40.35 3.56
756 757 0.877649 CGTGCCGCAGATCTAATGCT 60.878 55.000 0.00 0.00 41.61 3.79
757 758 0.585357 GTGCCGCAGATCTAATGCTG 59.415 55.000 0.00 0.00 41.61 4.41
758 759 0.465287 TGCCGCAGATCTAATGCTGA 59.535 50.000 0.00 0.00 41.61 4.26
759 760 1.134431 TGCCGCAGATCTAATGCTGAA 60.134 47.619 0.00 0.00 41.61 3.02
760 761 1.262683 GCCGCAGATCTAATGCTGAAC 59.737 52.381 0.00 0.00 41.61 3.18
761 762 2.831333 CCGCAGATCTAATGCTGAACT 58.169 47.619 0.00 0.00 41.61 3.01
762 763 3.800261 GCCGCAGATCTAATGCTGAACTA 60.800 47.826 0.00 0.00 41.61 2.24
763 764 4.564041 CCGCAGATCTAATGCTGAACTAT 58.436 43.478 0.00 0.00 41.61 2.12
764 765 4.388165 CCGCAGATCTAATGCTGAACTATG 59.612 45.833 0.00 0.00 41.61 2.23
765 766 4.143158 CGCAGATCTAATGCTGAACTATGC 60.143 45.833 0.00 0.00 41.61 3.14
766 767 4.996122 GCAGATCTAATGCTGAACTATGCT 59.004 41.667 0.00 0.00 40.59 3.79
767 768 5.469421 GCAGATCTAATGCTGAACTATGCTT 59.531 40.000 0.00 0.00 40.59 3.91
768 769 6.017275 GCAGATCTAATGCTGAACTATGCTTT 60.017 38.462 0.00 0.00 40.59 3.51
769 770 7.468357 GCAGATCTAATGCTGAACTATGCTTTT 60.468 37.037 0.00 0.00 40.59 2.27
770 771 7.856398 CAGATCTAATGCTGAACTATGCTTTTG 59.144 37.037 0.00 0.00 34.06 2.44
771 772 7.555554 AGATCTAATGCTGAACTATGCTTTTGT 59.444 33.333 0.00 0.00 0.00 2.83
772 773 7.452880 TCTAATGCTGAACTATGCTTTTGTT 57.547 32.000 0.00 0.00 0.00 2.83
773 774 7.307694 TCTAATGCTGAACTATGCTTTTGTTG 58.692 34.615 0.00 0.00 0.00 3.33
774 775 4.241590 TGCTGAACTATGCTTTTGTTGG 57.758 40.909 0.00 0.00 0.00 3.77
775 776 3.636300 TGCTGAACTATGCTTTTGTTGGT 59.364 39.130 0.00 0.00 0.00 3.67
776 777 4.229876 GCTGAACTATGCTTTTGTTGGTC 58.770 43.478 0.00 0.00 0.00 4.02
777 778 4.261572 GCTGAACTATGCTTTTGTTGGTCA 60.262 41.667 0.00 0.00 0.00 4.02
778 779 5.565439 GCTGAACTATGCTTTTGTTGGTCAT 60.565 40.000 0.00 0.00 0.00 3.06
779 780 6.349280 GCTGAACTATGCTTTTGTTGGTCATA 60.349 38.462 0.00 0.00 0.00 2.15
780 781 7.517614 TGAACTATGCTTTTGTTGGTCATAA 57.482 32.000 0.00 0.00 0.00 1.90
781 782 8.121305 TGAACTATGCTTTTGTTGGTCATAAT 57.879 30.769 0.00 0.00 0.00 1.28
782 783 8.028354 TGAACTATGCTTTTGTTGGTCATAATG 58.972 33.333 0.00 0.00 0.00 1.90
783 784 7.466746 ACTATGCTTTTGTTGGTCATAATGT 57.533 32.000 0.00 0.00 0.00 2.71
784 785 7.895759 ACTATGCTTTTGTTGGTCATAATGTT 58.104 30.769 0.00 0.00 0.00 2.71
785 786 7.814107 ACTATGCTTTTGTTGGTCATAATGTTG 59.186 33.333 0.00 0.00 0.00 3.33
786 787 4.749099 TGCTTTTGTTGGTCATAATGTTGC 59.251 37.500 0.00 0.00 0.00 4.17
787 788 4.990426 GCTTTTGTTGGTCATAATGTTGCT 59.010 37.500 0.00 0.00 0.00 3.91
788 789 6.155827 GCTTTTGTTGGTCATAATGTTGCTA 58.844 36.000 0.00 0.00 0.00 3.49
789 790 6.813152 GCTTTTGTTGGTCATAATGTTGCTAT 59.187 34.615 0.00 0.00 0.00 2.97
790 791 7.973388 GCTTTTGTTGGTCATAATGTTGCTATA 59.027 33.333 0.00 0.00 0.00 1.31
792 793 9.800433 TTTTGTTGGTCATAATGTTGCTATATG 57.200 29.630 0.00 0.00 0.00 1.78
793 794 8.518430 TTGTTGGTCATAATGTTGCTATATGT 57.482 30.769 0.00 0.00 0.00 2.29
794 795 7.929159 TGTTGGTCATAATGTTGCTATATGTG 58.071 34.615 0.00 0.00 0.00 3.21
795 796 7.555914 TGTTGGTCATAATGTTGCTATATGTGT 59.444 33.333 0.00 0.00 0.00 3.72
796 797 8.405531 GTTGGTCATAATGTTGCTATATGTGTT 58.594 33.333 0.00 0.00 0.00 3.32
797 798 7.929159 TGGTCATAATGTTGCTATATGTGTTG 58.071 34.615 0.00 0.00 0.00 3.33
798 799 7.555914 TGGTCATAATGTTGCTATATGTGTTGT 59.444 33.333 0.00 0.00 0.00 3.32
799 800 8.405531 GGTCATAATGTTGCTATATGTGTTGTT 58.594 33.333 0.00 0.00 0.00 2.83
800 801 9.225201 GTCATAATGTTGCTATATGTGTTGTTG 57.775 33.333 0.00 0.00 0.00 3.33
801 802 8.404765 TCATAATGTTGCTATATGTGTTGTTGG 58.595 33.333 0.00 0.00 0.00 3.77
802 803 6.588719 AATGTTGCTATATGTGTTGTTGGT 57.411 33.333 0.00 0.00 0.00 3.67
803 804 5.621197 TGTTGCTATATGTGTTGTTGGTC 57.379 39.130 0.00 0.00 0.00 4.02
804 805 5.312895 TGTTGCTATATGTGTTGTTGGTCT 58.687 37.500 0.00 0.00 0.00 3.85
805 806 5.411361 TGTTGCTATATGTGTTGTTGGTCTC 59.589 40.000 0.00 0.00 0.00 3.36
806 807 5.420725 TGCTATATGTGTTGTTGGTCTCT 57.579 39.130 0.00 0.00 0.00 3.10
807 808 5.178061 TGCTATATGTGTTGTTGGTCTCTG 58.822 41.667 0.00 0.00 0.00 3.35
808 809 5.046663 TGCTATATGTGTTGTTGGTCTCTGA 60.047 40.000 0.00 0.00 0.00 3.27
809 810 5.874810 GCTATATGTGTTGTTGGTCTCTGAA 59.125 40.000 0.00 0.00 0.00 3.02
810 811 6.036517 GCTATATGTGTTGTTGGTCTCTGAAG 59.963 42.308 0.00 0.00 0.00 3.02
811 812 3.627395 TGTGTTGTTGGTCTCTGAAGT 57.373 42.857 0.00 0.00 0.00 3.01
812 813 3.531538 TGTGTTGTTGGTCTCTGAAGTC 58.468 45.455 0.00 0.00 0.00 3.01
813 814 2.540101 GTGTTGTTGGTCTCTGAAGTCG 59.460 50.000 0.00 0.00 0.00 4.18
814 815 2.167693 TGTTGTTGGTCTCTGAAGTCGT 59.832 45.455 0.00 0.00 0.00 4.34
815 816 2.795175 TGTTGGTCTCTGAAGTCGTC 57.205 50.000 0.00 0.00 0.00 4.20
816 817 1.340248 TGTTGGTCTCTGAAGTCGTCC 59.660 52.381 0.00 0.00 0.00 4.79
971 987 3.754188 GCTAAGCCATGAACAAGACAG 57.246 47.619 0.00 0.00 0.00 3.51
1013 1029 3.036819 AGAGCAGCATGAGGTCTGAATA 58.963 45.455 16.38 0.00 41.82 1.75
1062 1078 1.069049 GCAAATGCCAAACAGGACTGT 59.931 47.619 0.00 0.00 41.22 3.55
1226 1275 1.380524 CTGAAGCTCCCATTCAGCTG 58.619 55.000 7.63 7.63 46.96 4.24
1259 1308 6.530913 AGCAATGACATGATATACGTTGTC 57.469 37.500 0.00 8.52 33.51 3.18
1325 1374 5.412594 TGAGTTGAGTCATTTTGTAGATGGC 59.587 40.000 0.00 0.00 0.00 4.40
1349 1398 0.593128 GCATGCAAGACAACGACCTT 59.407 50.000 14.21 0.00 0.00 3.50
1421 1470 0.934496 CGAGCGGTTGTGAGAAAACA 59.066 50.000 0.00 0.00 0.00 2.83
1462 1511 4.127171 TCTTCAAACGTTTCCAGAGAAGG 58.873 43.478 25.49 14.39 33.65 3.46
1463 1512 2.218603 TCAAACGTTTCCAGAGAAGGC 58.781 47.619 11.37 0.00 32.35 4.35
1464 1513 1.266989 CAAACGTTTCCAGAGAAGGCC 59.733 52.381 11.37 0.00 32.35 5.19
1465 1514 0.765510 AACGTTTCCAGAGAAGGCCT 59.234 50.000 0.00 0.00 32.35 5.19
1466 1515 0.765510 ACGTTTCCAGAGAAGGCCTT 59.234 50.000 20.65 20.65 32.35 4.35
1467 1516 1.270893 ACGTTTCCAGAGAAGGCCTTC 60.271 52.381 34.25 34.25 39.78 3.46
1468 1517 1.270839 CGTTTCCAGAGAAGGCCTTCA 60.271 52.381 39.84 21.39 41.84 3.02
1469 1518 2.810400 CGTTTCCAGAGAAGGCCTTCAA 60.810 50.000 39.84 25.41 41.84 2.69
1470 1519 3.222603 GTTTCCAGAGAAGGCCTTCAAA 58.777 45.455 39.84 28.84 41.84 2.69
1471 1520 2.568623 TCCAGAGAAGGCCTTCAAAC 57.431 50.000 39.84 29.83 41.84 2.93
1472 1521 1.160137 CCAGAGAAGGCCTTCAAACG 58.840 55.000 39.84 26.20 41.84 3.60
1473 1522 1.543429 CCAGAGAAGGCCTTCAAACGT 60.543 52.381 39.84 23.73 41.84 3.99
1474 1523 2.222027 CAGAGAAGGCCTTCAAACGTT 58.778 47.619 39.84 23.02 41.84 3.99
1475 1524 2.618709 CAGAGAAGGCCTTCAAACGTTT 59.381 45.455 39.84 22.32 41.84 3.60
1476 1525 2.879026 AGAGAAGGCCTTCAAACGTTTC 59.121 45.455 39.84 27.92 41.84 2.78
1477 1526 1.954382 AGAAGGCCTTCAAACGTTTCC 59.046 47.619 39.84 15.74 41.84 3.13
1478 1527 1.679153 GAAGGCCTTCAAACGTTTCCA 59.321 47.619 35.71 0.00 39.31 3.53
1479 1528 1.318576 AGGCCTTCAAACGTTTCCAG 58.681 50.000 11.37 9.60 0.00 3.86
1480 1529 1.133915 AGGCCTTCAAACGTTTCCAGA 60.134 47.619 11.37 2.77 0.00 3.86
1481 1530 1.266989 GGCCTTCAAACGTTTCCAGAG 59.733 52.381 11.37 6.54 0.00 3.35
1482 1531 2.218603 GCCTTCAAACGTTTCCAGAGA 58.781 47.619 11.37 1.96 0.00 3.10
1483 1532 2.616842 GCCTTCAAACGTTTCCAGAGAA 59.383 45.455 11.37 10.23 0.00 2.87
1484 1533 3.304057 GCCTTCAAACGTTTCCAGAGAAG 60.304 47.826 21.96 21.96 32.35 2.85
1498 1547 3.414700 GAAGGCCGTCGTGCACAG 61.415 66.667 18.64 9.95 0.00 3.66
1519 1568 0.508641 CTCAGAACACGGCTTCAACG 59.491 55.000 0.00 0.00 37.36 4.10
1566 1617 0.673985 AGCAATGCAGCTGCCATATG 59.326 50.000 34.64 25.91 44.66 1.78
1575 1630 2.104967 AGCTGCCATATGTGTGCATTT 58.895 42.857 5.72 0.00 36.58 2.32
1664 1721 1.048601 TTTCAGGACTCCAAGCTCGT 58.951 50.000 0.00 0.00 0.00 4.18
1722 1779 5.943416 TCCAACAACTACATATCAACCCAAG 59.057 40.000 0.00 0.00 0.00 3.61
1740 1797 0.186386 AGCGACCCCTCTACATAGCT 59.814 55.000 0.00 0.00 0.00 3.32
1999 2082 7.441017 TGCCACTGCAATTTAGAAGTAAAAAT 58.559 30.769 0.00 0.00 46.66 1.82
2025 2108 6.065374 TGTGCACTTTTCTTCCTTTATACCA 58.935 36.000 19.41 0.00 0.00 3.25
2028 2111 7.001674 TGCACTTTTCTTCCTTTATACCAGAA 58.998 34.615 0.00 0.00 0.00 3.02
2161 2246 1.259840 TGTACTTGGGCCCGGAGTAC 61.260 60.000 37.52 37.52 43.68 2.73
2290 2375 3.453070 GATCGACAGAGCCTGGCCC 62.453 68.421 16.57 2.63 35.82 5.80
2347 2432 1.328279 TCTGCCTCTTCGAACTGACA 58.672 50.000 0.00 0.00 0.00 3.58
2359 2444 1.001268 GAACTGACAGACACGAGCAGA 60.001 52.381 10.08 0.00 0.00 4.26
2364 2449 2.232208 TGACAGACACGAGCAGATTCAT 59.768 45.455 0.00 0.00 0.00 2.57
2430 2519 7.326454 CCATGAGAGAGTTTGACTGAAGAATA 58.674 38.462 0.00 0.00 0.00 1.75
2574 2674 8.167605 TCCTATAACTAACTAGTGATGACTGC 57.832 38.462 0.00 0.00 36.50 4.40
2589 2689 2.027653 TGACTGCGATTTCCACCATGTA 60.028 45.455 0.00 0.00 0.00 2.29
2607 2713 5.412594 CCATGTATCTCTCTCTCTAGTGAGC 59.587 48.000 15.54 2.53 41.24 4.26
2613 2719 3.872696 TCTCTCTCTAGTGAGCTGACAG 58.127 50.000 15.54 8.54 40.03 3.51
2619 2725 5.718146 TCTCTAGTGAGCTGACAGAAATTG 58.282 41.667 5.98 0.00 40.03 2.32
2623 2729 2.810274 GTGAGCTGACAGAAATTGCTGA 59.190 45.455 20.85 0.00 39.20 4.26
2624 2730 3.072211 TGAGCTGACAGAAATTGCTGAG 58.928 45.455 20.85 9.00 39.20 3.35
2625 2731 3.072944 GAGCTGACAGAAATTGCTGAGT 58.927 45.455 20.85 0.00 39.20 3.41
2626 2732 2.812591 AGCTGACAGAAATTGCTGAGTG 59.187 45.455 20.85 9.67 39.20 3.51
2627 2733 2.551459 GCTGACAGAAATTGCTGAGTGT 59.449 45.455 20.85 0.00 39.20 3.55
2628 2734 3.608707 GCTGACAGAAATTGCTGAGTGTG 60.609 47.826 20.85 6.41 39.20 3.82
2629 2735 3.544684 TGACAGAAATTGCTGAGTGTGT 58.455 40.909 20.85 0.00 39.20 3.72
2643 2750 3.942748 TGAGTGTGTTTGTGTTTCCTACC 59.057 43.478 0.00 0.00 0.00 3.18
2699 2808 6.300354 ACGTGTCCTATTTTTCAGTCAAAG 57.700 37.500 0.00 0.00 0.00 2.77
2707 2816 5.701029 ATTTTTCAGTCAAAGTTGTTGCG 57.299 34.783 0.00 0.00 0.00 4.85
2737 2846 4.378770 CCACATGAATAGTGATATTGCGCC 60.379 45.833 4.18 0.00 39.30 6.53
2775 2884 7.985476 ACTTGTTATAAGTAGATGCGCAAAAT 58.015 30.769 17.11 5.80 0.00 1.82
2790 2901 4.030977 GCGCAAAATAGCATTCAACTCAAG 59.969 41.667 0.30 0.00 0.00 3.02
2794 2905 7.096106 CGCAAAATAGCATTCAACTCAAGAAAA 60.096 33.333 0.00 0.00 0.00 2.29
2828 2939 1.069022 GCATTCAAGTCTGCTTTCGCA 60.069 47.619 0.00 0.00 45.60 5.10
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 4.272511 TCGCTGGGCCGGGAAAAA 62.273 61.111 15.62 0.00 0.00 1.94
9 10 4.715523 CTCGCTGGGCCGGGAAAA 62.716 66.667 15.62 0.00 0.00 2.29
19 20 4.441695 TTCGCTGGCTCTCGCTGG 62.442 66.667 0.00 0.00 36.09 4.85
20 21 2.884685 CTTCGCTGGCTCTCGCTG 60.885 66.667 0.00 0.00 36.09 5.18
21 22 4.140599 CCTTCGCTGGCTCTCGCT 62.141 66.667 0.00 0.00 36.09 4.93
46 47 1.004398 CTAGCTGTGAGTAGCGAGACG 60.004 57.143 0.00 0.00 45.63 4.18
47 48 2.281517 TCTAGCTGTGAGTAGCGAGAC 58.718 52.381 6.50 0.00 46.07 3.36
52 53 2.096248 ACAGGTCTAGCTGTGAGTAGC 58.904 52.381 13.65 0.00 44.01 3.58
53 54 3.759086 TGAACAGGTCTAGCTGTGAGTAG 59.241 47.826 14.99 0.00 33.66 2.57
54 55 3.763057 TGAACAGGTCTAGCTGTGAGTA 58.237 45.455 14.99 0.84 33.66 2.59
55 56 2.598565 TGAACAGGTCTAGCTGTGAGT 58.401 47.619 14.99 0.38 33.66 3.41
56 57 3.519579 CATGAACAGGTCTAGCTGTGAG 58.480 50.000 14.99 3.12 33.66 3.51
57 58 2.234661 CCATGAACAGGTCTAGCTGTGA 59.765 50.000 14.99 6.23 33.66 3.58
58 59 2.234661 TCCATGAACAGGTCTAGCTGTG 59.765 50.000 14.99 3.37 33.66 3.66
59 60 2.234908 GTCCATGAACAGGTCTAGCTGT 59.765 50.000 8.95 8.95 35.00 4.40
60 61 2.234661 TGTCCATGAACAGGTCTAGCTG 59.765 50.000 7.60 7.60 0.00 4.24
61 62 2.540383 TGTCCATGAACAGGTCTAGCT 58.460 47.619 0.00 0.00 0.00 3.32
62 63 3.003480 GTTGTCCATGAACAGGTCTAGC 58.997 50.000 0.00 0.00 0.00 3.42
63 64 3.600388 GGTTGTCCATGAACAGGTCTAG 58.400 50.000 0.00 0.00 0.00 2.43
64 65 2.304761 GGGTTGTCCATGAACAGGTCTA 59.695 50.000 0.00 0.00 35.00 2.59
65 66 1.073923 GGGTTGTCCATGAACAGGTCT 59.926 52.381 0.00 0.00 35.00 3.85
66 67 1.534729 GGGTTGTCCATGAACAGGTC 58.465 55.000 0.00 0.00 35.00 3.85
67 68 0.250727 CGGGTTGTCCATGAACAGGT 60.251 55.000 0.00 0.00 34.36 4.00
68 69 0.960364 CCGGGTTGTCCATGAACAGG 60.960 60.000 0.00 0.00 34.36 4.00
69 70 1.586154 GCCGGGTTGTCCATGAACAG 61.586 60.000 2.18 0.00 34.36 3.16
70 71 1.602323 GCCGGGTTGTCCATGAACA 60.602 57.895 2.18 0.00 34.36 3.18
71 72 2.340328 GGCCGGGTTGTCCATGAAC 61.340 63.158 2.18 0.00 34.36 3.18
72 73 2.034999 GGCCGGGTTGTCCATGAA 59.965 61.111 2.18 0.00 34.36 2.57
73 74 4.041762 GGGCCGGGTTGTCCATGA 62.042 66.667 2.18 0.00 34.36 3.07
96 97 3.702048 TCGGGCTTCGGGTTCAGG 61.702 66.667 0.75 0.00 39.77 3.86
97 98 2.434359 GTCGGGCTTCGGGTTCAG 60.434 66.667 0.75 0.00 39.77 3.02
98 99 2.119484 AATGTCGGGCTTCGGGTTCA 62.119 55.000 0.75 0.00 39.77 3.18
99 100 1.366854 GAATGTCGGGCTTCGGGTTC 61.367 60.000 0.75 0.81 39.77 3.62
100 101 1.376812 GAATGTCGGGCTTCGGGTT 60.377 57.895 0.75 0.00 39.77 4.11
101 102 2.267961 GAATGTCGGGCTTCGGGT 59.732 61.111 0.75 0.00 39.77 5.28
102 103 2.890474 CGAATGTCGGGCTTCGGG 60.890 66.667 6.38 0.00 40.31 5.14
111 112 1.519455 GAGCCTGGACCGAATGTCG 60.519 63.158 0.00 0.00 45.46 4.35
112 113 1.519455 CGAGCCTGGACCGAATGTC 60.519 63.158 0.00 0.00 43.67 3.06
113 114 2.579201 CGAGCCTGGACCGAATGT 59.421 61.111 0.00 0.00 0.00 2.71
114 115 2.202932 CCGAGCCTGGACCGAATG 60.203 66.667 0.00 0.00 0.00 2.67
115 116 3.470888 CCCGAGCCTGGACCGAAT 61.471 66.667 0.00 0.00 0.00 3.34
123 124 3.259633 AAAGTGGAGCCCGAGCCTG 62.260 63.158 0.00 0.00 41.25 4.85
124 125 2.930562 AAAGTGGAGCCCGAGCCT 60.931 61.111 0.00 0.00 41.25 4.58
125 126 2.436824 GAAAGTGGAGCCCGAGCC 60.437 66.667 0.00 0.00 41.25 4.70
126 127 1.743252 CAGAAAGTGGAGCCCGAGC 60.743 63.158 0.00 0.00 40.32 5.03
127 128 0.390472 GTCAGAAAGTGGAGCCCGAG 60.390 60.000 0.00 0.00 0.00 4.63
128 129 1.671742 GTCAGAAAGTGGAGCCCGA 59.328 57.895 0.00 0.00 0.00 5.14
129 130 1.376037 GGTCAGAAAGTGGAGCCCG 60.376 63.158 0.00 0.00 0.00 6.13
130 131 1.002011 GGGTCAGAAAGTGGAGCCC 60.002 63.158 0.00 0.00 44.03 5.19
131 132 1.376037 CGGGTCAGAAAGTGGAGCC 60.376 63.158 0.00 0.00 45.80 4.70
132 133 0.034896 TTCGGGTCAGAAAGTGGAGC 59.965 55.000 0.00 0.00 0.00 4.70
133 134 1.941668 GCTTCGGGTCAGAAAGTGGAG 60.942 57.143 0.00 0.00 0.00 3.86
134 135 0.034896 GCTTCGGGTCAGAAAGTGGA 59.965 55.000 0.00 0.00 0.00 4.02
135 136 0.955919 GGCTTCGGGTCAGAAAGTGG 60.956 60.000 0.00 0.00 0.00 4.00
136 137 0.955919 GGGCTTCGGGTCAGAAAGTG 60.956 60.000 0.00 0.00 0.00 3.16
137 138 1.375326 GGGCTTCGGGTCAGAAAGT 59.625 57.895 0.00 0.00 0.00 2.66
138 139 1.741770 CGGGCTTCGGGTCAGAAAG 60.742 63.158 0.00 0.00 34.75 2.62
139 140 2.211410 TCGGGCTTCGGGTCAGAAA 61.211 57.895 0.75 0.00 39.77 2.52
140 141 2.602267 TCGGGCTTCGGGTCAGAA 60.602 61.111 0.75 0.00 39.77 3.02
141 142 3.379445 GTCGGGCTTCGGGTCAGA 61.379 66.667 0.75 0.00 39.77 3.27
142 143 4.452733 GGTCGGGCTTCGGGTCAG 62.453 72.222 0.75 0.00 39.77 3.51
147 148 4.382320 TTTCGGGTCGGGCTTCGG 62.382 66.667 0.75 0.00 39.77 4.30
148 149 2.813908 CTTTCGGGTCGGGCTTCG 60.814 66.667 0.00 0.00 40.90 3.79
149 150 3.125573 GCTTTCGGGTCGGGCTTC 61.126 66.667 0.00 0.00 0.00 3.86
150 151 4.717313 GGCTTTCGGGTCGGGCTT 62.717 66.667 0.00 0.00 0.00 4.35
154 155 2.300850 TATTCGGGCTTTCGGGTCGG 62.301 60.000 0.00 0.00 0.00 4.79
155 156 0.460635 TTATTCGGGCTTTCGGGTCG 60.461 55.000 0.00 0.00 0.00 4.79
156 157 1.669265 CTTTATTCGGGCTTTCGGGTC 59.331 52.381 0.00 0.00 0.00 4.46
157 158 1.746470 CTTTATTCGGGCTTTCGGGT 58.254 50.000 0.00 0.00 0.00 5.28
158 159 0.380733 GCTTTATTCGGGCTTTCGGG 59.619 55.000 0.00 0.00 0.00 5.14
159 160 0.380733 GGCTTTATTCGGGCTTTCGG 59.619 55.000 0.00 0.00 0.00 4.30
160 161 0.380733 GGGCTTTATTCGGGCTTTCG 59.619 55.000 0.00 0.00 0.00 3.46
161 162 0.380733 CGGGCTTTATTCGGGCTTTC 59.619 55.000 0.00 0.00 0.00 2.62
162 163 0.034863 TCGGGCTTTATTCGGGCTTT 60.035 50.000 0.00 0.00 0.00 3.51
163 164 0.034863 TTCGGGCTTTATTCGGGCTT 60.035 50.000 0.00 0.00 0.00 4.35
164 165 0.034863 TTTCGGGCTTTATTCGGGCT 60.035 50.000 0.00 0.00 0.00 5.19
165 166 1.029681 ATTTCGGGCTTTATTCGGGC 58.970 50.000 0.00 0.00 0.00 6.13
166 167 2.021457 ACATTTCGGGCTTTATTCGGG 58.979 47.619 0.00 0.00 0.00 5.14
167 168 6.737254 ATATACATTTCGGGCTTTATTCGG 57.263 37.500 0.00 0.00 0.00 4.30
262 263 7.132213 CGAAGTACATGAACAGTGACATTTTT 58.868 34.615 0.00 0.00 0.00 1.94
263 264 6.293407 CCGAAGTACATGAACAGTGACATTTT 60.293 38.462 0.00 0.00 0.00 1.82
264 265 5.179368 CCGAAGTACATGAACAGTGACATTT 59.821 40.000 0.00 0.00 0.00 2.32
265 266 4.690748 CCGAAGTACATGAACAGTGACATT 59.309 41.667 0.00 0.00 0.00 2.71
266 267 4.245660 CCGAAGTACATGAACAGTGACAT 58.754 43.478 0.00 0.00 0.00 3.06
267 268 3.554129 CCCGAAGTACATGAACAGTGACA 60.554 47.826 0.00 0.00 0.00 3.58
268 269 2.993899 CCCGAAGTACATGAACAGTGAC 59.006 50.000 0.00 0.00 0.00 3.67
269 270 2.611971 GCCCGAAGTACATGAACAGTGA 60.612 50.000 0.00 0.00 0.00 3.41
270 271 1.732259 GCCCGAAGTACATGAACAGTG 59.268 52.381 0.00 0.00 0.00 3.66
271 272 1.338769 GGCCCGAAGTACATGAACAGT 60.339 52.381 0.00 0.00 0.00 3.55
272 273 1.338674 TGGCCCGAAGTACATGAACAG 60.339 52.381 0.00 0.00 0.00 3.16
273 274 0.687920 TGGCCCGAAGTACATGAACA 59.312 50.000 0.00 0.00 0.00 3.18
274 275 1.369625 CTGGCCCGAAGTACATGAAC 58.630 55.000 0.00 0.00 0.00 3.18
275 276 0.251916 CCTGGCCCGAAGTACATGAA 59.748 55.000 0.00 0.00 0.00 2.57
276 277 1.904771 CCTGGCCCGAAGTACATGA 59.095 57.895 0.00 0.00 0.00 3.07
277 278 1.819632 GCCTGGCCCGAAGTACATG 60.820 63.158 7.66 0.00 0.00 3.21
278 279 2.590092 GCCTGGCCCGAAGTACAT 59.410 61.111 7.66 0.00 0.00 2.29
279 280 3.712907 GGCCTGGCCCGAAGTACA 61.713 66.667 27.77 0.00 44.06 2.90
297 298 3.662117 AAATCCCAAGCCCGAGCCC 62.662 63.158 0.00 0.00 41.25 5.19
298 299 1.257750 AAAAATCCCAAGCCCGAGCC 61.258 55.000 0.00 0.00 41.25 4.70
299 300 2.276869 AAAAATCCCAAGCCCGAGC 58.723 52.632 0.00 0.00 40.32 5.03
326 327 3.373565 GGGCCGGGCTTGACAAAG 61.374 66.667 28.80 0.00 36.41 2.77
333 334 4.360405 ATTTGTCGGGCCGGGCTT 62.360 61.111 28.80 4.71 0.00 4.35
334 335 4.796495 GATTTGTCGGGCCGGGCT 62.796 66.667 28.80 5.51 0.00 5.19
336 337 2.124320 ATGATTTGTCGGGCCGGG 60.124 61.111 27.98 0.00 0.00 5.73
337 338 1.439353 CTGATGATTTGTCGGGCCGG 61.439 60.000 27.98 7.65 0.00 6.13
338 339 1.439353 CCTGATGATTTGTCGGGCCG 61.439 60.000 22.51 22.51 35.47 6.13
339 340 0.394352 ACCTGATGATTTGTCGGGCC 60.394 55.000 0.00 0.00 44.42 5.80
340 341 1.463674 AACCTGATGATTTGTCGGGC 58.536 50.000 1.01 0.00 44.42 6.13
341 342 4.261801 AGTAAACCTGATGATTTGTCGGG 58.738 43.478 0.00 0.00 45.74 5.14
342 343 4.935205 TGAGTAAACCTGATGATTTGTCGG 59.065 41.667 0.00 0.00 0.00 4.79
343 344 5.408299 TGTGAGTAAACCTGATGATTTGTCG 59.592 40.000 0.00 0.00 0.00 4.35
344 345 6.621596 GCTGTGAGTAAACCTGATGATTTGTC 60.622 42.308 0.00 0.00 0.00 3.18
345 346 5.182001 GCTGTGAGTAAACCTGATGATTTGT 59.818 40.000 0.00 0.00 0.00 2.83
346 347 5.392380 GGCTGTGAGTAAACCTGATGATTTG 60.392 44.000 0.00 0.00 0.00 2.32
347 348 4.702131 GGCTGTGAGTAAACCTGATGATTT 59.298 41.667 0.00 0.00 0.00 2.17
348 349 4.263462 TGGCTGTGAGTAAACCTGATGATT 60.263 41.667 0.00 0.00 0.00 2.57
349 350 3.264193 TGGCTGTGAGTAAACCTGATGAT 59.736 43.478 0.00 0.00 0.00 2.45
350 351 2.637382 TGGCTGTGAGTAAACCTGATGA 59.363 45.455 0.00 0.00 0.00 2.92
351 352 3.057969 TGGCTGTGAGTAAACCTGATG 57.942 47.619 0.00 0.00 0.00 3.07
352 353 3.679389 CTTGGCTGTGAGTAAACCTGAT 58.321 45.455 0.00 0.00 0.00 2.90
353 354 2.810400 GCTTGGCTGTGAGTAAACCTGA 60.810 50.000 0.00 0.00 0.00 3.86
354 355 1.537202 GCTTGGCTGTGAGTAAACCTG 59.463 52.381 0.00 0.00 0.00 4.00
355 356 1.878102 CGCTTGGCTGTGAGTAAACCT 60.878 52.381 0.00 0.00 0.00 3.50
356 357 0.517316 CGCTTGGCTGTGAGTAAACC 59.483 55.000 0.00 0.00 0.00 3.27
357 358 0.110192 GCGCTTGGCTGTGAGTAAAC 60.110 55.000 0.00 0.00 39.11 2.01
358 359 1.565156 CGCGCTTGGCTGTGAGTAAA 61.565 55.000 5.56 0.00 40.44 2.01
359 360 2.027073 CGCGCTTGGCTGTGAGTAA 61.027 57.895 5.56 0.00 40.44 2.24
360 361 2.428960 TTCGCGCTTGGCTGTGAGTA 62.429 55.000 5.56 0.00 40.44 2.59
361 362 3.807631 TTCGCGCTTGGCTGTGAGT 62.808 57.895 5.56 0.00 40.44 3.41
362 363 3.043713 TTCGCGCTTGGCTGTGAG 61.044 61.111 5.56 0.00 40.44 3.51
363 364 3.345808 GTTCGCGCTTGGCTGTGA 61.346 61.111 5.56 0.00 40.44 3.58
364 365 4.389576 GGTTCGCGCTTGGCTGTG 62.390 66.667 5.56 0.00 40.44 3.66
366 367 3.950794 TAGGGTTCGCGCTTGGCTG 62.951 63.158 5.56 0.00 40.98 4.85
367 368 3.665675 CTAGGGTTCGCGCTTGGCT 62.666 63.158 5.56 0.00 40.98 4.75
368 369 3.195698 CTAGGGTTCGCGCTTGGC 61.196 66.667 5.56 0.00 40.98 4.52
369 370 2.511600 CCTAGGGTTCGCGCTTGG 60.512 66.667 5.56 0.00 43.68 3.61
370 371 1.079405 TTCCTAGGGTTCGCGCTTG 60.079 57.895 9.46 0.00 40.98 4.01
371 372 1.079336 GTTCCTAGGGTTCGCGCTT 60.079 57.895 9.46 0.00 40.98 4.68
372 373 2.577593 GTTCCTAGGGTTCGCGCT 59.422 61.111 9.46 0.00 43.22 5.92
373 374 2.510918 GGTTCCTAGGGTTCGCGC 60.511 66.667 9.46 0.00 0.00 6.86
374 375 2.202703 CGGTTCCTAGGGTTCGCG 60.203 66.667 9.46 0.00 0.00 5.87
375 376 0.037046 TTTCGGTTCCTAGGGTTCGC 60.037 55.000 9.46 0.00 0.00 4.70
376 377 2.071540 GTTTTCGGTTCCTAGGGTTCG 58.928 52.381 9.46 10.27 0.00 3.95
377 378 2.071540 CGTTTTCGGTTCCTAGGGTTC 58.928 52.381 9.46 0.00 39.94 3.62
378 379 1.879372 GCGTTTTCGGTTCCTAGGGTT 60.879 52.381 9.46 0.00 44.29 4.11
379 380 0.321034 GCGTTTTCGGTTCCTAGGGT 60.321 55.000 9.46 0.00 44.29 4.34
380 381 1.022982 GGCGTTTTCGGTTCCTAGGG 61.023 60.000 9.46 0.00 44.29 3.53
381 382 1.022982 GGGCGTTTTCGGTTCCTAGG 61.023 60.000 0.82 0.82 44.29 3.02
382 383 1.356527 CGGGCGTTTTCGGTTCCTAG 61.357 60.000 0.00 0.00 44.29 3.02
383 384 1.374505 CGGGCGTTTTCGGTTCCTA 60.375 57.895 0.00 0.00 44.29 2.94
384 385 2.667199 CGGGCGTTTTCGGTTCCT 60.667 61.111 0.00 0.00 44.29 3.36
385 386 3.729698 CCGGGCGTTTTCGGTTCC 61.730 66.667 0.00 0.00 44.29 3.62
391 392 0.736672 GAGAGAGACCGGGCGTTTTC 60.737 60.000 6.32 0.00 0.00 2.29
392 393 1.292541 GAGAGAGACCGGGCGTTTT 59.707 57.895 6.32 0.00 0.00 2.43
393 394 2.971452 GAGAGAGACCGGGCGTTT 59.029 61.111 6.32 0.00 0.00 3.60
394 395 3.441290 CGAGAGAGACCGGGCGTT 61.441 66.667 6.32 0.00 0.00 4.84
395 396 4.719106 ACGAGAGAGACCGGGCGT 62.719 66.667 6.32 0.00 0.00 5.68
396 397 3.878519 GACGAGAGAGACCGGGCG 61.879 72.222 6.32 0.00 0.00 6.13
397 398 2.438795 AGACGAGAGAGACCGGGC 60.439 66.667 6.32 0.52 0.00 6.13
398 399 0.393267 AAGAGACGAGAGAGACCGGG 60.393 60.000 6.32 0.00 0.00 5.73
399 400 1.011333 GAAGAGACGAGAGAGACCGG 58.989 60.000 0.00 0.00 0.00 5.28
400 401 1.011333 GGAAGAGACGAGAGAGACCG 58.989 60.000 0.00 0.00 0.00 4.79
401 402 2.285977 GAGGAAGAGACGAGAGAGACC 58.714 57.143 0.00 0.00 0.00 3.85
402 403 2.285977 GGAGGAAGAGACGAGAGAGAC 58.714 57.143 0.00 0.00 0.00 3.36
403 404 1.210967 GGGAGGAAGAGACGAGAGAGA 59.789 57.143 0.00 0.00 0.00 3.10
404 405 1.675552 GGGAGGAAGAGACGAGAGAG 58.324 60.000 0.00 0.00 0.00 3.20
405 406 0.256464 GGGGAGGAAGAGACGAGAGA 59.744 60.000 0.00 0.00 0.00 3.10
406 407 0.033991 TGGGGAGGAAGAGACGAGAG 60.034 60.000 0.00 0.00 0.00 3.20
407 408 0.408309 TTGGGGAGGAAGAGACGAGA 59.592 55.000 0.00 0.00 0.00 4.04
408 409 1.267121 TTTGGGGAGGAAGAGACGAG 58.733 55.000 0.00 0.00 0.00 4.18
409 410 1.831736 GATTTGGGGAGGAAGAGACGA 59.168 52.381 0.00 0.00 0.00 4.20
410 411 1.134371 GGATTTGGGGAGGAAGAGACG 60.134 57.143 0.00 0.00 0.00 4.18
411 412 1.213182 GGGATTTGGGGAGGAAGAGAC 59.787 57.143 0.00 0.00 0.00 3.36
412 413 1.082879 AGGGATTTGGGGAGGAAGAGA 59.917 52.381 0.00 0.00 0.00 3.10
413 414 1.601248 AGGGATTTGGGGAGGAAGAG 58.399 55.000 0.00 0.00 0.00 2.85
414 415 2.074922 AAGGGATTTGGGGAGGAAGA 57.925 50.000 0.00 0.00 0.00 2.87
415 416 2.624293 GGAAAGGGATTTGGGGAGGAAG 60.624 54.545 0.00 0.00 0.00 3.46
416 417 1.361197 GGAAAGGGATTTGGGGAGGAA 59.639 52.381 0.00 0.00 0.00 3.36
417 418 1.007607 GGAAAGGGATTTGGGGAGGA 58.992 55.000 0.00 0.00 0.00 3.71
418 419 0.032117 GGGAAAGGGATTTGGGGAGG 60.032 60.000 0.00 0.00 0.00 4.30
419 420 0.709992 TGGGAAAGGGATTTGGGGAG 59.290 55.000 0.00 0.00 0.00 4.30
420 421 0.411848 GTGGGAAAGGGATTTGGGGA 59.588 55.000 0.00 0.00 0.00 4.81
421 422 0.116143 TGTGGGAAAGGGATTTGGGG 59.884 55.000 0.00 0.00 0.00 4.96
422 423 2.022718 TTGTGGGAAAGGGATTTGGG 57.977 50.000 0.00 0.00 0.00 4.12
423 424 4.429854 TTTTTGTGGGAAAGGGATTTGG 57.570 40.909 0.00 0.00 0.00 3.28
495 496 2.824041 CAAGGGGTGGATTCGCCG 60.824 66.667 0.00 0.00 44.27 6.46
496 497 3.140814 GCAAGGGGTGGATTCGCC 61.141 66.667 0.00 0.00 42.66 5.54
497 498 3.140814 GGCAAGGGGTGGATTCGC 61.141 66.667 0.00 0.00 0.00 4.70
498 499 1.452108 GAGGCAAGGGGTGGATTCG 60.452 63.158 0.00 0.00 0.00 3.34
499 500 0.106967 GAGAGGCAAGGGGTGGATTC 60.107 60.000 0.00 0.00 0.00 2.52
500 501 0.551131 AGAGAGGCAAGGGGTGGATT 60.551 55.000 0.00 0.00 0.00 3.01
501 502 1.083706 AGAGAGGCAAGGGGTGGAT 59.916 57.895 0.00 0.00 0.00 3.41
502 503 1.920325 CAGAGAGGCAAGGGGTGGA 60.920 63.158 0.00 0.00 0.00 4.02
503 504 2.190488 GACAGAGAGGCAAGGGGTGG 62.190 65.000 0.00 0.00 0.00 4.61
504 505 1.197430 AGACAGAGAGGCAAGGGGTG 61.197 60.000 0.00 0.00 0.00 4.61
505 506 0.413832 TAGACAGAGAGGCAAGGGGT 59.586 55.000 0.00 0.00 0.00 4.95
506 507 1.118838 CTAGACAGAGAGGCAAGGGG 58.881 60.000 0.00 0.00 0.00 4.79
507 508 0.463620 GCTAGACAGAGAGGCAAGGG 59.536 60.000 0.00 0.00 0.00 3.95
508 509 1.136695 CAGCTAGACAGAGAGGCAAGG 59.863 57.143 0.00 0.00 0.00 3.61
509 510 1.471327 GCAGCTAGACAGAGAGGCAAG 60.471 57.143 0.00 0.00 0.00 4.01
510 511 0.534412 GCAGCTAGACAGAGAGGCAA 59.466 55.000 0.00 0.00 0.00 4.52
511 512 1.661498 CGCAGCTAGACAGAGAGGCA 61.661 60.000 0.00 0.00 0.00 4.75
512 513 1.065600 CGCAGCTAGACAGAGAGGC 59.934 63.158 0.00 0.00 0.00 4.70
513 514 0.749818 TCCGCAGCTAGACAGAGAGG 60.750 60.000 0.00 0.00 0.00 3.69
514 515 0.662619 CTCCGCAGCTAGACAGAGAG 59.337 60.000 0.00 0.00 0.00 3.20
515 516 0.034960 ACTCCGCAGCTAGACAGAGA 60.035 55.000 0.00 0.00 0.00 3.10
516 517 0.100325 CACTCCGCAGCTAGACAGAG 59.900 60.000 0.00 0.00 0.00 3.35
517 518 1.315981 CCACTCCGCAGCTAGACAGA 61.316 60.000 0.00 0.00 0.00 3.41
518 519 1.140589 CCACTCCGCAGCTAGACAG 59.859 63.158 0.00 0.00 0.00 3.51
519 520 1.304134 TCCACTCCGCAGCTAGACA 60.304 57.895 0.00 0.00 0.00 3.41
520 521 1.139947 GTCCACTCCGCAGCTAGAC 59.860 63.158 0.00 0.00 0.00 2.59
521 522 2.407428 CGTCCACTCCGCAGCTAGA 61.407 63.158 0.00 0.00 0.00 2.43
522 523 2.103143 CGTCCACTCCGCAGCTAG 59.897 66.667 0.00 0.00 0.00 3.42
523 524 2.675423 ACGTCCACTCCGCAGCTA 60.675 61.111 0.00 0.00 0.00 3.32
524 525 4.363990 CACGTCCACTCCGCAGCT 62.364 66.667 0.00 0.00 0.00 4.24
526 527 4.363990 AGCACGTCCACTCCGCAG 62.364 66.667 0.00 0.00 0.00 5.18
527 528 4.357947 GAGCACGTCCACTCCGCA 62.358 66.667 0.00 0.00 0.00 5.69
528 529 3.973267 GAGAGCACGTCCACTCCGC 62.973 68.421 6.22 0.00 33.18 5.54
529 530 2.179517 GAGAGCACGTCCACTCCG 59.820 66.667 6.22 0.00 33.18 4.63
530 531 2.179517 CGAGAGCACGTCCACTCC 59.820 66.667 0.00 0.00 33.18 3.85
542 543 2.202676 GCCGTGAAGAGGCGAGAG 60.203 66.667 0.00 0.00 45.58 3.20
548 549 4.821589 GCCGAGGCCGTGAAGAGG 62.822 72.222 1.97 0.00 34.56 3.69
549 550 3.997064 CTGCCGAGGCCGTGAAGAG 62.997 68.421 12.05 0.00 41.09 2.85
550 551 4.069232 CTGCCGAGGCCGTGAAGA 62.069 66.667 12.05 0.00 41.09 2.87
551 552 4.379243 ACTGCCGAGGCCGTGAAG 62.379 66.667 12.05 4.30 37.20 3.02
565 566 4.767255 GGTGAGAGCGCCCCACTG 62.767 72.222 19.20 0.00 38.80 3.66
574 575 2.512515 GACGCCATGGGTGAGAGC 60.513 66.667 15.13 0.00 36.58 4.09
575 576 1.153489 CAGACGCCATGGGTGAGAG 60.153 63.158 15.13 0.00 36.58 3.20
576 577 1.480212 AACAGACGCCATGGGTGAGA 61.480 55.000 15.13 0.00 36.58 3.27
577 578 1.003355 AACAGACGCCATGGGTGAG 60.003 57.895 15.13 6.93 36.58 3.51
578 579 1.302431 CAACAGACGCCATGGGTGA 60.302 57.895 15.13 0.00 36.58 4.02
579 580 2.981560 GCAACAGACGCCATGGGTG 61.982 63.158 15.13 3.46 39.41 4.61
580 581 2.672996 GCAACAGACGCCATGGGT 60.673 61.111 15.13 9.85 0.00 4.51
581 582 2.203972 CTTGCAACAGACGCCATGGG 62.204 60.000 15.13 6.26 0.00 4.00
582 583 1.210931 CTTGCAACAGACGCCATGG 59.789 57.895 7.63 7.63 0.00 3.66
583 584 1.210931 CCTTGCAACAGACGCCATG 59.789 57.895 0.00 0.00 0.00 3.66
584 585 1.973281 CCCTTGCAACAGACGCCAT 60.973 57.895 0.00 0.00 0.00 4.40
585 586 2.594303 CCCTTGCAACAGACGCCA 60.594 61.111 0.00 0.00 0.00 5.69
586 587 3.365265 CCCCTTGCAACAGACGCC 61.365 66.667 0.00 0.00 0.00 5.68
587 588 3.365265 CCCCCTTGCAACAGACGC 61.365 66.667 0.00 0.00 0.00 5.19
588 589 1.002134 ATCCCCCTTGCAACAGACG 60.002 57.895 0.00 0.00 0.00 4.18
589 590 0.967380 CCATCCCCCTTGCAACAGAC 60.967 60.000 0.00 0.00 0.00 3.51
590 591 1.383799 CCATCCCCCTTGCAACAGA 59.616 57.895 0.00 0.00 0.00 3.41
591 592 1.683365 CCCATCCCCCTTGCAACAG 60.683 63.158 0.00 0.00 0.00 3.16
592 593 2.444696 CCCATCCCCCTTGCAACA 59.555 61.111 0.00 0.00 0.00 3.33
593 594 2.364186 CCCCATCCCCCTTGCAAC 60.364 66.667 0.00 0.00 0.00 4.17
594 595 4.397010 GCCCCATCCCCCTTGCAA 62.397 66.667 0.00 0.00 0.00 4.08
615 616 4.081030 CATCGGCATCGGCATCGC 62.081 66.667 0.00 0.00 43.71 4.58
616 617 3.417224 CCATCGGCATCGGCATCG 61.417 66.667 0.00 0.00 43.71 3.84
626 627 3.420214 TTCGTAGGTCGCCATCGGC 62.420 63.158 0.00 0.00 46.75 5.54
627 628 1.588139 GTTCGTAGGTCGCCATCGG 60.588 63.158 10.56 0.00 39.67 4.18
628 629 0.866061 CTGTTCGTAGGTCGCCATCG 60.866 60.000 0.00 3.35 39.67 3.84
629 630 0.172803 ACTGTTCGTAGGTCGCCATC 59.827 55.000 0.00 0.00 39.67 3.51
630 631 1.404391 CTACTGTTCGTAGGTCGCCAT 59.596 52.381 0.00 0.00 41.57 4.40
631 632 0.806868 CTACTGTTCGTAGGTCGCCA 59.193 55.000 0.00 0.00 41.57 5.69
632 633 3.618774 CTACTGTTCGTAGGTCGCC 57.381 57.895 0.00 0.00 41.57 5.54
638 639 2.032620 AGCCATCCCTACTGTTCGTAG 58.967 52.381 0.00 0.00 44.26 3.51
639 640 1.754803 CAGCCATCCCTACTGTTCGTA 59.245 52.381 0.00 0.00 0.00 3.43
640 641 0.537188 CAGCCATCCCTACTGTTCGT 59.463 55.000 0.00 0.00 0.00 3.85
641 642 0.537188 ACAGCCATCCCTACTGTTCG 59.463 55.000 0.00 0.00 41.78 3.95
642 643 1.471676 CGACAGCCATCCCTACTGTTC 60.472 57.143 0.00 0.00 44.40 3.18
643 644 0.537188 CGACAGCCATCCCTACTGTT 59.463 55.000 0.00 0.00 44.40 3.16
644 645 0.614979 ACGACAGCCATCCCTACTGT 60.615 55.000 0.00 0.00 46.92 3.55
645 646 0.103208 GACGACAGCCATCCCTACTG 59.897 60.000 0.00 0.00 37.45 2.74
646 647 1.384989 CGACGACAGCCATCCCTACT 61.385 60.000 0.00 0.00 0.00 2.57
647 648 1.065928 CGACGACAGCCATCCCTAC 59.934 63.158 0.00 0.00 0.00 3.18
648 649 2.782222 GCGACGACAGCCATCCCTA 61.782 63.158 0.00 0.00 0.00 3.53
649 650 4.148825 GCGACGACAGCCATCCCT 62.149 66.667 0.00 0.00 0.00 4.20
668 669 4.722700 ACCTGCGCCATGGACACC 62.723 66.667 18.40 0.00 0.00 4.16
669 670 3.127533 GACCTGCGCCATGGACAC 61.128 66.667 18.40 3.78 0.00 3.67
670 671 2.970379 ATGACCTGCGCCATGGACA 61.970 57.895 18.40 12.00 33.19 4.02
671 672 2.124570 ATGACCTGCGCCATGGAC 60.125 61.111 18.40 7.14 0.00 4.02
672 673 2.124612 CATGACCTGCGCCATGGA 60.125 61.111 18.40 0.00 37.19 3.41
673 674 3.896133 GCATGACCTGCGCCATGG 61.896 66.667 20.93 7.63 41.97 3.66
681 682 6.370994 GGTGATAGATTAAGATGCATGACCTG 59.629 42.308 2.46 0.00 0.00 4.00
682 683 6.471146 GGTGATAGATTAAGATGCATGACCT 58.529 40.000 2.46 0.00 0.00 3.85
683 684 5.349817 CGGTGATAGATTAAGATGCATGACC 59.650 44.000 2.46 0.00 0.00 4.02
684 685 5.928839 ACGGTGATAGATTAAGATGCATGAC 59.071 40.000 2.46 0.00 0.00 3.06
685 686 6.101650 ACGGTGATAGATTAAGATGCATGA 57.898 37.500 2.46 0.00 0.00 3.07
686 687 5.061435 CGACGGTGATAGATTAAGATGCATG 59.939 44.000 2.46 0.00 0.00 4.06
687 688 5.164233 CGACGGTGATAGATTAAGATGCAT 58.836 41.667 0.00 0.00 0.00 3.96
688 689 4.546570 CGACGGTGATAGATTAAGATGCA 58.453 43.478 0.00 0.00 0.00 3.96
689 690 3.921021 CCGACGGTGATAGATTAAGATGC 59.079 47.826 5.48 0.00 0.00 3.91
690 691 3.921021 GCCGACGGTGATAGATTAAGATG 59.079 47.826 16.73 0.00 0.00 2.90
691 692 3.056749 GGCCGACGGTGATAGATTAAGAT 60.057 47.826 16.73 0.00 0.00 2.40
692 693 2.295349 GGCCGACGGTGATAGATTAAGA 59.705 50.000 16.73 0.00 0.00 2.10
693 694 2.035449 TGGCCGACGGTGATAGATTAAG 59.965 50.000 16.73 0.00 0.00 1.85
694 695 2.033372 TGGCCGACGGTGATAGATTAA 58.967 47.619 16.73 0.00 0.00 1.40
695 696 1.611977 CTGGCCGACGGTGATAGATTA 59.388 52.381 16.73 0.00 0.00 1.75
696 697 0.389391 CTGGCCGACGGTGATAGATT 59.611 55.000 16.73 0.00 0.00 2.40
697 698 1.464376 CCTGGCCGACGGTGATAGAT 61.464 60.000 16.73 0.00 0.00 1.98
698 699 2.125326 CCTGGCCGACGGTGATAGA 61.125 63.158 16.73 0.00 0.00 1.98
699 700 2.417516 CCTGGCCGACGGTGATAG 59.582 66.667 16.73 8.57 0.00 2.08
700 701 3.151710 CCCTGGCCGACGGTGATA 61.152 66.667 16.73 0.00 0.00 2.15
712 713 3.790437 ACATCCGCTCTGCCCTGG 61.790 66.667 0.00 0.00 0.00 4.45
713 714 2.513204 CACATCCGCTCTGCCCTG 60.513 66.667 0.00 0.00 0.00 4.45
714 715 2.527951 GAACACATCCGCTCTGCCCT 62.528 60.000 0.00 0.00 0.00 5.19
715 716 2.045926 AACACATCCGCTCTGCCC 60.046 61.111 0.00 0.00 0.00 5.36
716 717 0.745845 ATGAACACATCCGCTCTGCC 60.746 55.000 0.00 0.00 0.00 4.85
717 718 1.063174 GAATGAACACATCCGCTCTGC 59.937 52.381 0.00 0.00 0.00 4.26
718 719 1.325640 CGAATGAACACATCCGCTCTG 59.674 52.381 0.00 0.00 0.00 3.35
719 720 1.066858 ACGAATGAACACATCCGCTCT 60.067 47.619 0.00 0.00 0.00 4.09
720 721 1.061131 CACGAATGAACACATCCGCTC 59.939 52.381 0.00 0.00 0.00 5.03
721 722 1.078709 CACGAATGAACACATCCGCT 58.921 50.000 0.00 0.00 0.00 5.52
722 723 0.521242 GCACGAATGAACACATCCGC 60.521 55.000 0.00 0.00 0.00 5.54
723 724 0.096976 GGCACGAATGAACACATCCG 59.903 55.000 0.00 0.00 0.00 4.18
724 725 3.996825 GGCACGAATGAACACATCC 57.003 52.632 0.00 0.00 0.00 3.51
738 739 0.585357 CAGCATTAGATCTGCGGCAC 59.415 55.000 5.18 0.00 44.38 5.01
739 740 0.465287 TCAGCATTAGATCTGCGGCA 59.535 50.000 5.18 1.29 44.38 5.69
740 741 1.262683 GTTCAGCATTAGATCTGCGGC 59.737 52.381 5.18 5.86 44.38 6.53
741 742 2.831333 AGTTCAGCATTAGATCTGCGG 58.169 47.619 5.18 2.18 44.38 5.69
742 743 4.143158 GCATAGTTCAGCATTAGATCTGCG 60.143 45.833 5.18 0.00 44.38 5.18
743 744 4.996122 AGCATAGTTCAGCATTAGATCTGC 59.004 41.667 5.18 0.74 39.97 4.26
744 745 7.493743 AAAGCATAGTTCAGCATTAGATCTG 57.506 36.000 5.18 0.00 0.00 2.90
745 746 7.555554 ACAAAAGCATAGTTCAGCATTAGATCT 59.444 33.333 0.00 0.00 0.00 2.75
746 747 7.701445 ACAAAAGCATAGTTCAGCATTAGATC 58.299 34.615 0.00 0.00 0.00 2.75
747 748 7.636150 ACAAAAGCATAGTTCAGCATTAGAT 57.364 32.000 0.00 0.00 0.00 1.98
748 749 7.307694 CAACAAAAGCATAGTTCAGCATTAGA 58.692 34.615 0.00 0.00 0.00 2.10
749 750 6.529125 CCAACAAAAGCATAGTTCAGCATTAG 59.471 38.462 0.00 0.00 0.00 1.73
750 751 6.015519 ACCAACAAAAGCATAGTTCAGCATTA 60.016 34.615 0.00 0.00 0.00 1.90
751 752 5.221501 ACCAACAAAAGCATAGTTCAGCATT 60.222 36.000 0.00 0.00 0.00 3.56
752 753 4.281688 ACCAACAAAAGCATAGTTCAGCAT 59.718 37.500 0.00 0.00 0.00 3.79
753 754 3.636300 ACCAACAAAAGCATAGTTCAGCA 59.364 39.130 0.00 0.00 0.00 4.41
754 755 4.229876 GACCAACAAAAGCATAGTTCAGC 58.770 43.478 0.00 0.00 0.00 4.26
755 756 5.437289 TGACCAACAAAAGCATAGTTCAG 57.563 39.130 0.00 0.00 0.00 3.02
756 757 7.517614 TTATGACCAACAAAAGCATAGTTCA 57.482 32.000 0.00 0.00 0.00 3.18
757 758 8.028938 ACATTATGACCAACAAAAGCATAGTTC 58.971 33.333 0.00 0.00 0.00 3.01
758 759 7.895759 ACATTATGACCAACAAAAGCATAGTT 58.104 30.769 0.00 0.00 0.00 2.24
759 760 7.466746 ACATTATGACCAACAAAAGCATAGT 57.533 32.000 0.00 0.00 0.00 2.12
760 761 7.201461 GCAACATTATGACCAACAAAAGCATAG 60.201 37.037 0.00 0.00 0.00 2.23
761 762 6.589523 GCAACATTATGACCAACAAAAGCATA 59.410 34.615 0.00 0.00 0.00 3.14
762 763 5.409214 GCAACATTATGACCAACAAAAGCAT 59.591 36.000 0.00 0.00 0.00 3.79
763 764 4.749099 GCAACATTATGACCAACAAAAGCA 59.251 37.500 0.00 0.00 0.00 3.91
764 765 4.990426 AGCAACATTATGACCAACAAAAGC 59.010 37.500 0.00 0.00 0.00 3.51
766 767 9.800433 CATATAGCAACATTATGACCAACAAAA 57.200 29.630 0.00 0.00 0.00 2.44
767 768 8.965819 ACATATAGCAACATTATGACCAACAAA 58.034 29.630 0.00 0.00 0.00 2.83
768 769 8.404765 CACATATAGCAACATTATGACCAACAA 58.595 33.333 0.00 0.00 0.00 2.83
769 770 7.555914 ACACATATAGCAACATTATGACCAACA 59.444 33.333 0.00 0.00 0.00 3.33
770 771 7.930217 ACACATATAGCAACATTATGACCAAC 58.070 34.615 0.00 0.00 0.00 3.77
771 772 8.404765 CAACACATATAGCAACATTATGACCAA 58.595 33.333 0.00 0.00 0.00 3.67
772 773 7.555914 ACAACACATATAGCAACATTATGACCA 59.444 33.333 0.00 0.00 0.00 4.02
773 774 7.930217 ACAACACATATAGCAACATTATGACC 58.070 34.615 0.00 0.00 0.00 4.02
774 775 9.225201 CAACAACACATATAGCAACATTATGAC 57.775 33.333 0.00 0.00 0.00 3.06
775 776 8.404765 CCAACAACACATATAGCAACATTATGA 58.595 33.333 0.00 0.00 0.00 2.15
776 777 8.190122 ACCAACAACACATATAGCAACATTATG 58.810 33.333 0.00 0.00 0.00 1.90
777 778 8.292444 ACCAACAACACATATAGCAACATTAT 57.708 30.769 0.00 0.00 0.00 1.28
778 779 7.609918 AGACCAACAACACATATAGCAACATTA 59.390 33.333 0.00 0.00 0.00 1.90
779 780 6.434028 AGACCAACAACACATATAGCAACATT 59.566 34.615 0.00 0.00 0.00 2.71
780 781 5.945784 AGACCAACAACACATATAGCAACAT 59.054 36.000 0.00 0.00 0.00 2.71
781 782 5.312895 AGACCAACAACACATATAGCAACA 58.687 37.500 0.00 0.00 0.00 3.33
782 783 5.643777 AGAGACCAACAACACATATAGCAAC 59.356 40.000 0.00 0.00 0.00 4.17
783 784 5.643348 CAGAGACCAACAACACATATAGCAA 59.357 40.000 0.00 0.00 0.00 3.91
784 785 5.046663 TCAGAGACCAACAACACATATAGCA 60.047 40.000 0.00 0.00 0.00 3.49
785 786 5.419542 TCAGAGACCAACAACACATATAGC 58.580 41.667 0.00 0.00 0.00 2.97
786 787 7.099764 ACTTCAGAGACCAACAACACATATAG 58.900 38.462 0.00 0.00 0.00 1.31
787 788 7.004555 ACTTCAGAGACCAACAACACATATA 57.995 36.000 0.00 0.00 0.00 0.86
788 789 5.869579 ACTTCAGAGACCAACAACACATAT 58.130 37.500 0.00 0.00 0.00 1.78
789 790 5.290493 ACTTCAGAGACCAACAACACATA 57.710 39.130 0.00 0.00 0.00 2.29
790 791 4.130118 GACTTCAGAGACCAACAACACAT 58.870 43.478 0.00 0.00 0.00 3.21
791 792 3.531538 GACTTCAGAGACCAACAACACA 58.468 45.455 0.00 0.00 0.00 3.72
792 793 2.540101 CGACTTCAGAGACCAACAACAC 59.460 50.000 0.00 0.00 0.00 3.32
793 794 2.167693 ACGACTTCAGAGACCAACAACA 59.832 45.455 0.00 0.00 0.00 3.33
794 795 2.795470 GACGACTTCAGAGACCAACAAC 59.205 50.000 0.00 0.00 0.00 3.32
795 796 2.223971 GGACGACTTCAGAGACCAACAA 60.224 50.000 0.00 0.00 0.00 2.83
796 797 1.340248 GGACGACTTCAGAGACCAACA 59.660 52.381 0.00 0.00 0.00 3.33
797 798 1.340248 TGGACGACTTCAGAGACCAAC 59.660 52.381 0.00 0.00 0.00 3.77
798 799 1.613925 CTGGACGACTTCAGAGACCAA 59.386 52.381 0.00 0.00 33.11 3.67
799 800 1.248486 CTGGACGACTTCAGAGACCA 58.752 55.000 0.00 0.00 33.11 4.02
800 801 1.068194 CACTGGACGACTTCAGAGACC 60.068 57.143 0.00 0.00 35.20 3.85
801 802 1.667467 GCACTGGACGACTTCAGAGAC 60.667 57.143 0.00 0.00 35.20 3.36
802 803 0.598562 GCACTGGACGACTTCAGAGA 59.401 55.000 0.00 0.00 35.20 3.10
803 804 0.600557 AGCACTGGACGACTTCAGAG 59.399 55.000 0.00 0.00 35.20 3.35
804 805 1.040646 AAGCACTGGACGACTTCAGA 58.959 50.000 0.00 0.00 35.20 3.27
805 806 1.143305 CAAGCACTGGACGACTTCAG 58.857 55.000 0.00 0.00 37.07 3.02
806 807 0.880278 GCAAGCACTGGACGACTTCA 60.880 55.000 0.00 0.00 0.00 3.02
807 808 0.601311 AGCAAGCACTGGACGACTTC 60.601 55.000 0.00 0.00 0.00 3.01
808 809 0.179045 AAGCAAGCACTGGACGACTT 60.179 50.000 0.00 0.00 0.00 3.01
809 810 0.179045 AAAGCAAGCACTGGACGACT 60.179 50.000 0.00 0.00 0.00 4.18
810 811 0.663153 AAAAGCAAGCACTGGACGAC 59.337 50.000 0.00 0.00 0.00 4.34
811 812 0.662619 CAAAAGCAAGCACTGGACGA 59.337 50.000 0.00 0.00 0.00 4.20
812 813 0.318107 CCAAAAGCAAGCACTGGACG 60.318 55.000 0.00 0.00 0.00 4.79
813 814 0.746659 ACCAAAAGCAAGCACTGGAC 59.253 50.000 12.23 0.00 0.00 4.02
814 815 0.746063 CACCAAAAGCAAGCACTGGA 59.254 50.000 12.23 0.00 0.00 3.86
815 816 0.746063 TCACCAAAAGCAAGCACTGG 59.254 50.000 0.00 0.35 0.00 4.00
816 817 2.400399 CATCACCAAAAGCAAGCACTG 58.600 47.619 0.00 0.00 0.00 3.66
869 870 1.601162 GCACCACTTGTTCTGCACATG 60.601 52.381 0.00 0.00 34.43 3.21
971 987 4.158764 TCTGAGCTAGTTCTAGCACTTTCC 59.841 45.833 26.62 12.73 45.11 3.13
1062 1078 6.653320 GGTGAAGGATGTAACTTACAACATGA 59.347 38.462 5.73 0.00 42.76 3.07
1226 1275 3.633525 TCATGTCATTGCTATGGGCTTTC 59.366 43.478 8.30 0.00 42.39 2.62
1325 1374 1.081242 GTTGTCTTGCATGCGGTGG 60.081 57.895 14.09 2.99 0.00 4.61
1349 1398 2.233922 CCCCTTGCTTCTAAAGACGAGA 59.766 50.000 0.00 0.00 0.00 4.04
1421 1470 2.158667 AGAGTTTCCCGTGTCAAACCAT 60.159 45.455 0.00 0.00 33.66 3.55
1462 1511 2.218603 TCTCTGGAAACGTTTGAAGGC 58.781 47.619 20.10 2.96 0.00 4.35
1463 1512 3.251004 CCTTCTCTGGAAACGTTTGAAGG 59.749 47.826 28.34 28.34 41.69 3.46
1464 1513 3.304057 GCCTTCTCTGGAAACGTTTGAAG 60.304 47.826 20.10 21.31 0.00 3.02
1465 1514 2.616842 GCCTTCTCTGGAAACGTTTGAA 59.383 45.455 20.10 13.65 0.00 2.69
1466 1515 2.218603 GCCTTCTCTGGAAACGTTTGA 58.781 47.619 20.10 8.80 0.00 2.69
1467 1516 1.266989 GGCCTTCTCTGGAAACGTTTG 59.733 52.381 20.10 4.23 0.00 2.93
1468 1517 1.605753 GGCCTTCTCTGGAAACGTTT 58.394 50.000 14.57 14.57 0.00 3.60
1469 1518 0.602905 CGGCCTTCTCTGGAAACGTT 60.603 55.000 0.00 0.00 0.00 3.99
1470 1519 1.004918 CGGCCTTCTCTGGAAACGT 60.005 57.895 0.00 0.00 0.00 3.99
1471 1520 1.004918 ACGGCCTTCTCTGGAAACG 60.005 57.895 0.00 0.00 32.98 3.60
1472 1521 1.014564 CGACGGCCTTCTCTGGAAAC 61.015 60.000 7.75 0.00 0.00 2.78
1473 1522 1.292223 CGACGGCCTTCTCTGGAAA 59.708 57.895 7.75 0.00 0.00 3.13
1474 1523 1.906824 ACGACGGCCTTCTCTGGAA 60.907 57.895 7.75 0.00 0.00 3.53
1475 1524 2.282958 ACGACGGCCTTCTCTGGA 60.283 61.111 7.75 0.00 0.00 3.86
1476 1525 2.125912 CACGACGGCCTTCTCTGG 60.126 66.667 7.75 0.00 0.00 3.86
1477 1526 2.811317 GCACGACGGCCTTCTCTG 60.811 66.667 7.75 3.76 0.00 3.35
1478 1527 3.303135 TGCACGACGGCCTTCTCT 61.303 61.111 7.75 0.00 0.00 3.10
1479 1528 3.112709 GTGCACGACGGCCTTCTC 61.113 66.667 7.75 0.00 0.00 2.87
1480 1529 3.865929 CTGTGCACGACGGCCTTCT 62.866 63.158 13.13 0.00 0.00 2.85
1481 1530 3.414700 CTGTGCACGACGGCCTTC 61.415 66.667 13.13 0.00 0.00 3.46
1482 1531 4.988598 CCTGTGCACGACGGCCTT 62.989 66.667 13.13 0.00 0.00 4.35
1498 1547 0.884704 TTGAAGCCGTGTTCTGAGCC 60.885 55.000 0.00 0.00 0.00 4.70
1566 1617 5.049167 TGGTGAAATGAAAGAAATGCACAC 58.951 37.500 0.00 0.00 0.00 3.82
1664 1721 2.839486 AACCTGCTTCATTCGACTCA 57.161 45.000 0.00 0.00 0.00 3.41
1722 1779 1.906990 TAGCTATGTAGAGGGGTCGC 58.093 55.000 0.00 0.00 0.00 5.19
1740 1797 7.273320 TCTCTTCGACTTTCTCTTTCTGTTA 57.727 36.000 0.00 0.00 0.00 2.41
1999 2082 7.885922 TGGTATAAAGGAAGAAAAGTGCACATA 59.114 33.333 21.04 0.00 0.00 2.29
2003 2086 6.539173 TCTGGTATAAAGGAAGAAAAGTGCA 58.461 36.000 0.00 0.00 0.00 4.57
2007 2090 9.914131 CCTTTTTCTGGTATAAAGGAAGAAAAG 57.086 33.333 6.96 0.00 46.99 2.27
2142 2227 1.078891 TACTCCGGGCCCAAGTACA 59.921 57.895 24.92 7.63 0.00 2.90
2161 2246 2.169789 CAGGAGACATGCCGAAGCG 61.170 63.158 0.00 0.00 44.31 4.68
2290 2375 2.545526 CCCGACATCCGAGATGAATTTG 59.454 50.000 17.37 3.32 41.76 2.32
2347 2432 3.131755 TCATCATGAATCTGCTCGTGTCT 59.868 43.478 0.00 0.00 34.51 3.41
2359 2444 5.120054 TCACATGGACCTTCATCATGAAT 57.880 39.130 0.00 0.00 40.28 2.57
2364 2449 2.158914 CGGATCACATGGACCTTCATCA 60.159 50.000 0.00 0.00 0.00 3.07
2430 2519 3.577848 CAGGCTCTATCTAGCATCAGGTT 59.422 47.826 0.00 0.00 44.64 3.50
2482 2581 1.394917 GCAACAATAGCACAGGAGTCG 59.605 52.381 0.00 0.00 0.00 4.18
2574 2674 5.010516 AGAGAGAGATACATGGTGGAAATCG 59.989 44.000 0.00 0.00 0.00 3.34
2589 2689 4.164030 TGTCAGCTCACTAGAGAGAGAGAT 59.836 45.833 19.94 4.06 44.98 2.75
2607 2713 3.562973 ACACACTCAGCAATTTCTGTCAG 59.437 43.478 4.99 0.00 35.63 3.51
2613 2719 4.423732 ACACAAACACACTCAGCAATTTC 58.576 39.130 0.00 0.00 0.00 2.17
2619 2725 2.423538 AGGAAACACAAACACACTCAGC 59.576 45.455 0.00 0.00 0.00 4.26
2623 2729 3.284617 GGGTAGGAAACACAAACACACT 58.715 45.455 0.00 0.00 0.00 3.55
2624 2730 3.018149 TGGGTAGGAAACACAAACACAC 58.982 45.455 0.00 0.00 39.04 3.82
2625 2731 3.018149 GTGGGTAGGAAACACAAACACA 58.982 45.455 0.00 0.00 45.14 3.72
2626 2732 3.018149 TGTGGGTAGGAAACACAAACAC 58.982 45.455 0.00 0.00 45.14 3.32
2627 2733 3.367646 TGTGGGTAGGAAACACAAACA 57.632 42.857 0.00 0.00 45.14 2.83
2628 2734 3.634910 ACATGTGGGTAGGAAACACAAAC 59.365 43.478 0.00 0.00 45.14 2.93
2629 2735 3.634448 CACATGTGGGTAGGAAACACAAA 59.366 43.478 18.51 0.00 45.14 2.83
2643 2750 5.699299 GCTGAAGAAAGCACCACATGTGG 62.699 52.174 37.81 37.81 45.55 4.17
2652 2759 0.877743 GTCCCAGCTGAAGAAAGCAC 59.122 55.000 17.39 0.00 46.08 4.40
2658 2765 1.853963 GTCCTAGTCCCAGCTGAAGA 58.146 55.000 17.39 8.95 0.00 2.87
2685 2794 5.406649 TCGCAACAACTTTGACTGAAAAAT 58.593 33.333 0.00 0.00 0.00 1.82
2699 2808 1.301423 TGTGGTACCTTCGCAACAAC 58.699 50.000 14.36 0.00 0.00 3.32
2707 2816 8.993121 CAATATCACTATTCATGTGGTACCTTC 58.007 37.037 14.36 7.07 34.37 3.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.