Multiple sequence alignment - TraesCS7B01G404400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G404400 chr7B 100.000 3323 0 0 1 3323 672766486 672763164 0.000000e+00 6137.0
1 TraesCS7B01G404400 chr7D 93.694 2109 86 15 585 2685 595329328 595327259 0.000000e+00 3114.0
2 TraesCS7B01G404400 chr7D 91.988 337 21 6 2990 3323 595326904 595326571 5.020000e-128 468.0
3 TraesCS7B01G404400 chr7D 88.846 260 26 3 2685 2942 595327143 595326885 1.920000e-82 316.0
4 TraesCS7B01G404400 chr7A 93.964 1690 78 8 996 2685 688314253 688312588 0.000000e+00 2534.0
5 TraesCS7B01G404400 chr7A 94.118 340 15 3 585 924 688314697 688314363 2.290000e-141 512.0
6 TraesCS7B01G404400 chr7A 91.265 332 25 4 2994 3323 688312229 688311900 1.820000e-122 449.0
7 TraesCS7B01G404400 chr7A 97.600 250 5 1 310 558 735153869 735153620 8.520000e-116 427.0
8 TraesCS7B01G404400 chr7A 86.957 253 30 3 2692 2942 688312465 688312214 7.020000e-72 281.0
9 TraesCS7B01G404400 chr7A 73.837 172 32 10 1539 1703 232024962 232025127 4.630000e-04 56.5
10 TraesCS7B01G404400 chr7A 73.837 172 32 10 1539 1703 232058505 232058670 4.630000e-04 56.5
11 TraesCS7B01G404400 chr1B 98.776 245 2 1 314 557 37633493 37633249 5.090000e-118 435.0
12 TraesCS7B01G404400 chr1B 97.255 255 5 2 301 553 91965692 91965438 6.590000e-117 431.0
13 TraesCS7B01G404400 chr1B 98.374 246 2 2 309 553 687177737 687177493 6.590000e-117 431.0
14 TraesCS7B01G404400 chr1A 97.276 257 5 2 314 568 580495063 580495319 5.090000e-118 435.0
15 TraesCS7B01G404400 chr2A 96.578 263 5 4 311 570 553492273 553492534 1.830000e-117 433.0
16 TraesCS7B01G404400 chr6A 97.619 252 4 2 304 553 601242887 601243138 6.590000e-117 431.0
17 TraesCS7B01G404400 chr4B 98.374 246 2 2 314 557 36970245 36970490 6.590000e-117 431.0
18 TraesCS7B01G404400 chr5A 96.512 258 7 2 314 569 676603682 676603425 3.060000e-115 425.0
19 TraesCS7B01G404400 chr5A 79.261 487 76 22 1269 1738 531083135 531082657 1.920000e-82 316.0
20 TraesCS7B01G404400 chr5A 83.529 85 11 3 1156 1238 531083356 531083273 3.550000e-10 76.8
21 TraesCS7B01G404400 chr5B 79.671 487 74 19 1269 1738 504833234 504832756 8.890000e-86 327.0
22 TraesCS7B01G404400 chr5B 78.906 128 23 4 1113 1238 504833499 504833374 2.120000e-12 84.2
23 TraesCS7B01G404400 chr5D 79.055 487 77 19 1269 1738 417627059 417626581 8.950000e-81 311.0
24 TraesCS7B01G404400 chrUn 73.837 172 32 10 1539 1703 270733612 270733447 4.630000e-04 56.5
25 TraesCS7B01G404400 chrUn 73.837 172 32 10 1539 1703 282197326 282197491 4.630000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G404400 chr7B 672763164 672766486 3322 True 6137.000000 6137 100.000000 1 3323 1 chr7B.!!$R1 3322
1 TraesCS7B01G404400 chr7D 595326571 595329328 2757 True 1299.333333 3114 91.509333 585 3323 3 chr7D.!!$R1 2738
2 TraesCS7B01G404400 chr7A 688311900 688314697 2797 True 944.000000 2534 91.576000 585 3323 4 chr7A.!!$R2 2738
3 TraesCS7B01G404400 chr5B 504832756 504833499 743 True 205.600000 327 79.288500 1113 1738 2 chr5B.!!$R1 625

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
351 352 0.029834 TATAGCGCGTCCTCGGTTTC 59.97 55.0 8.43 0.0 40.82 2.78 F
539 540 0.040425 GTGGGCGCGCTATATTTTGG 60.04 55.0 32.29 0.0 0.00 3.28 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2139 2329 0.320160 TCTCGTCGTCTTCCTCGTCA 60.320 55.000 0.0 0.0 0.0 4.35 R
2502 2697 1.062587 GCGCGCACATTCAAAGATACT 59.937 47.619 29.1 0.0 0.0 2.12 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 48 8.729805 TTTTAAATGCTCCTGTTTTTCAATGT 57.270 26.923 0.00 0.00 0.00 2.71
48 49 8.729805 TTTAAATGCTCCTGTTTTTCAATGTT 57.270 26.923 0.00 0.00 0.00 2.71
49 50 8.729805 TTAAATGCTCCTGTTTTTCAATGTTT 57.270 26.923 0.00 0.00 0.00 2.83
50 51 6.607735 AATGCTCCTGTTTTTCAATGTTTG 57.392 33.333 0.00 0.00 0.00 2.93
51 52 5.083533 TGCTCCTGTTTTTCAATGTTTGT 57.916 34.783 0.00 0.00 0.00 2.83
52 53 5.108517 TGCTCCTGTTTTTCAATGTTTGTC 58.891 37.500 0.00 0.00 0.00 3.18
53 54 4.507756 GCTCCTGTTTTTCAATGTTTGTCC 59.492 41.667 0.00 0.00 0.00 4.02
54 55 5.659463 CTCCTGTTTTTCAATGTTTGTCCA 58.341 37.500 0.00 0.00 0.00 4.02
55 56 5.415221 TCCTGTTTTTCAATGTTTGTCCAC 58.585 37.500 0.00 0.00 0.00 4.02
56 57 5.186797 TCCTGTTTTTCAATGTTTGTCCACT 59.813 36.000 0.00 0.00 0.00 4.00
57 58 6.378564 TCCTGTTTTTCAATGTTTGTCCACTA 59.621 34.615 0.00 0.00 0.00 2.74
58 59 6.475402 CCTGTTTTTCAATGTTTGTCCACTAC 59.525 38.462 0.00 0.00 0.00 2.73
59 60 7.164230 TGTTTTTCAATGTTTGTCCACTACT 57.836 32.000 0.00 0.00 0.00 2.57
60 61 7.607250 TGTTTTTCAATGTTTGTCCACTACTT 58.393 30.769 0.00 0.00 0.00 2.24
61 62 7.757624 TGTTTTTCAATGTTTGTCCACTACTTC 59.242 33.333 0.00 0.00 0.00 3.01
62 63 7.397892 TTTTCAATGTTTGTCCACTACTTCA 57.602 32.000 0.00 0.00 0.00 3.02
63 64 7.397892 TTTCAATGTTTGTCCACTACTTCAA 57.602 32.000 0.00 0.00 0.00 2.69
64 65 7.397892 TTCAATGTTTGTCCACTACTTCAAA 57.602 32.000 0.00 0.00 0.00 2.69
65 66 7.397892 TCAATGTTTGTCCACTACTTCAAAA 57.602 32.000 0.00 0.00 32.81 2.44
66 67 8.006298 TCAATGTTTGTCCACTACTTCAAAAT 57.994 30.769 0.00 0.00 32.81 1.82
67 68 8.474025 TCAATGTTTGTCCACTACTTCAAAATT 58.526 29.630 0.00 0.00 32.81 1.82
68 69 9.743057 CAATGTTTGTCCACTACTTCAAAATTA 57.257 29.630 0.00 0.00 32.81 1.40
72 73 9.836076 GTTTGTCCACTACTTCAAAATTATACC 57.164 33.333 0.00 0.00 32.81 2.73
73 74 9.802039 TTTGTCCACTACTTCAAAATTATACCT 57.198 29.630 0.00 0.00 0.00 3.08
74 75 9.802039 TTGTCCACTACTTCAAAATTATACCTT 57.198 29.630 0.00 0.00 0.00 3.50
75 76 9.802039 TGTCCACTACTTCAAAATTATACCTTT 57.198 29.630 0.00 0.00 0.00 3.11
105 106 7.659290 AAATTTGTTCTGTTAGAAACGTTCG 57.341 32.000 0.00 0.00 35.75 3.95
106 107 4.782252 TTGTTCTGTTAGAAACGTTCGG 57.218 40.909 0.00 0.00 35.75 4.30
107 108 4.044336 TGTTCTGTTAGAAACGTTCGGA 57.956 40.909 0.00 0.00 35.75 4.55
108 109 3.798337 TGTTCTGTTAGAAACGTTCGGAC 59.202 43.478 0.00 0.00 35.75 4.79
109 110 3.996150 TCTGTTAGAAACGTTCGGACT 57.004 42.857 0.00 2.00 34.02 3.85
110 111 4.311816 TCTGTTAGAAACGTTCGGACTT 57.688 40.909 0.00 0.00 34.02 3.01
111 112 4.685924 TCTGTTAGAAACGTTCGGACTTT 58.314 39.130 0.00 0.00 34.02 2.66
112 113 5.111293 TCTGTTAGAAACGTTCGGACTTTT 58.889 37.500 0.00 0.00 30.79 2.27
113 114 5.005971 TCTGTTAGAAACGTTCGGACTTTTG 59.994 40.000 2.57 0.00 28.57 2.44
114 115 4.869297 TGTTAGAAACGTTCGGACTTTTGA 59.131 37.500 2.57 0.00 28.57 2.69
115 116 5.005971 TGTTAGAAACGTTCGGACTTTTGAG 59.994 40.000 2.57 0.00 28.57 3.02
116 117 3.788937 AGAAACGTTCGGACTTTTGAGA 58.211 40.909 2.57 0.00 28.57 3.27
117 118 4.186159 AGAAACGTTCGGACTTTTGAGAA 58.814 39.130 2.57 0.00 28.57 2.87
118 119 4.632688 AGAAACGTTCGGACTTTTGAGAAA 59.367 37.500 2.57 0.00 28.57 2.52
119 120 4.950434 AACGTTCGGACTTTTGAGAAAA 57.050 36.364 0.00 0.00 0.00 2.29
120 121 4.268767 ACGTTCGGACTTTTGAGAAAAC 57.731 40.909 0.00 0.00 0.00 2.43
121 122 3.685756 ACGTTCGGACTTTTGAGAAAACA 59.314 39.130 0.00 0.00 0.00 2.83
122 123 4.334481 ACGTTCGGACTTTTGAGAAAACAT 59.666 37.500 0.00 0.00 0.00 2.71
123 124 5.524646 ACGTTCGGACTTTTGAGAAAACATA 59.475 36.000 0.00 0.00 0.00 2.29
124 125 6.204108 ACGTTCGGACTTTTGAGAAAACATAT 59.796 34.615 0.00 0.00 0.00 1.78
125 126 7.075741 CGTTCGGACTTTTGAGAAAACATATT 58.924 34.615 0.00 0.00 0.00 1.28
126 127 7.268447 CGTTCGGACTTTTGAGAAAACATATTC 59.732 37.037 0.00 0.00 0.00 1.75
127 128 7.737972 TCGGACTTTTGAGAAAACATATTCA 57.262 32.000 0.00 0.00 0.00 2.57
128 129 7.806690 TCGGACTTTTGAGAAAACATATTCAG 58.193 34.615 0.00 0.00 0.00 3.02
129 130 7.659799 TCGGACTTTTGAGAAAACATATTCAGA 59.340 33.333 0.00 0.00 0.00 3.27
130 131 7.746475 CGGACTTTTGAGAAAACATATTCAGAC 59.254 37.037 0.00 0.00 0.00 3.51
131 132 8.787852 GGACTTTTGAGAAAACATATTCAGACT 58.212 33.333 0.00 0.00 0.00 3.24
138 139 9.554395 TGAGAAAACATATTCAGACTTTACACA 57.446 29.630 0.00 0.00 0.00 3.72
142 143 9.744468 AAAACATATTCAGACTTTACACAAACC 57.256 29.630 0.00 0.00 0.00 3.27
143 144 7.129109 ACATATTCAGACTTTACACAAACCG 57.871 36.000 0.00 0.00 0.00 4.44
144 145 6.932400 ACATATTCAGACTTTACACAAACCGA 59.068 34.615 0.00 0.00 0.00 4.69
145 146 7.606456 ACATATTCAGACTTTACACAAACCGAT 59.394 33.333 0.00 0.00 0.00 4.18
146 147 5.917541 TTCAGACTTTACACAAACCGATC 57.082 39.130 0.00 0.00 0.00 3.69
147 148 3.985279 TCAGACTTTACACAAACCGATCG 59.015 43.478 8.51 8.51 0.00 3.69
148 149 3.985279 CAGACTTTACACAAACCGATCGA 59.015 43.478 18.66 0.00 0.00 3.59
149 150 4.090066 CAGACTTTACACAAACCGATCGAG 59.910 45.833 18.66 9.42 0.00 4.04
150 151 4.022589 AGACTTTACACAAACCGATCGAGA 60.023 41.667 18.66 0.00 0.00 4.04
151 152 4.235360 ACTTTACACAAACCGATCGAGAG 58.765 43.478 18.66 1.96 0.00 3.20
167 168 3.994392 TCGAGAGAAGGAAAAACAATCCG 59.006 43.478 0.00 0.00 37.32 4.18
168 169 3.994392 CGAGAGAAGGAAAAACAATCCGA 59.006 43.478 0.00 0.00 42.03 4.55
169 170 4.143094 CGAGAGAAGGAAAAACAATCCGAC 60.143 45.833 0.00 0.00 42.03 4.79
170 171 4.072839 AGAGAAGGAAAAACAATCCGACC 58.927 43.478 0.00 0.00 42.03 4.79
171 172 4.072839 GAGAAGGAAAAACAATCCGACCT 58.927 43.478 0.00 0.00 42.03 3.85
172 173 3.821033 AGAAGGAAAAACAATCCGACCTG 59.179 43.478 0.00 0.00 42.03 4.00
173 174 1.886542 AGGAAAAACAATCCGACCTGC 59.113 47.619 0.00 0.00 42.03 4.85
174 175 1.067846 GGAAAAACAATCCGACCTGCC 60.068 52.381 0.00 0.00 0.00 4.85
175 176 0.596082 AAAAACAATCCGACCTGCCG 59.404 50.000 0.00 0.00 0.00 5.69
176 177 0.250553 AAAACAATCCGACCTGCCGA 60.251 50.000 0.00 0.00 0.00 5.54
177 178 0.035439 AAACAATCCGACCTGCCGAT 60.035 50.000 0.00 0.00 0.00 4.18
178 179 0.744414 AACAATCCGACCTGCCGATG 60.744 55.000 0.00 0.00 0.00 3.84
179 180 2.203070 AATCCGACCTGCCGATGC 60.203 61.111 0.00 0.00 38.26 3.91
180 181 4.592192 ATCCGACCTGCCGATGCG 62.592 66.667 0.00 0.00 41.78 4.73
183 184 4.498520 CGACCTGCCGATGCGACT 62.499 66.667 0.00 0.00 41.78 4.18
184 185 2.805546 GACCTGCCGATGCGACTA 59.194 61.111 0.00 0.00 41.78 2.59
185 186 1.299468 GACCTGCCGATGCGACTAG 60.299 63.158 0.00 0.00 41.78 2.57
200 201 4.580528 GCGACTAGCTCTATAGTATTCGC 58.419 47.826 13.84 13.84 44.04 4.70
201 202 4.093115 GCGACTAGCTCTATAGTATTCGCA 59.907 45.833 19.67 0.00 41.96 5.10
202 203 5.725590 GCGACTAGCTCTATAGTATTCGCAG 60.726 48.000 19.67 4.18 41.96 5.18
203 204 5.349270 CGACTAGCTCTATAGTATTCGCAGT 59.651 44.000 0.00 3.69 36.13 4.40
204 205 6.489127 ACTAGCTCTATAGTATTCGCAGTG 57.511 41.667 0.00 0.00 34.21 3.66
205 206 4.167554 AGCTCTATAGTATTCGCAGTGC 57.832 45.455 4.58 4.58 0.00 4.40
206 207 3.057174 AGCTCTATAGTATTCGCAGTGCC 60.057 47.826 10.11 0.00 0.00 5.01
207 208 3.057174 GCTCTATAGTATTCGCAGTGCCT 60.057 47.826 10.11 2.59 0.00 4.75
208 209 4.559704 GCTCTATAGTATTCGCAGTGCCTT 60.560 45.833 10.11 0.00 0.00 4.35
209 210 5.531122 TCTATAGTATTCGCAGTGCCTTT 57.469 39.130 10.11 0.00 0.00 3.11
210 211 5.914033 TCTATAGTATTCGCAGTGCCTTTT 58.086 37.500 10.11 0.00 0.00 2.27
211 212 5.983720 TCTATAGTATTCGCAGTGCCTTTTC 59.016 40.000 10.11 0.00 0.00 2.29
212 213 2.778299 AGTATTCGCAGTGCCTTTTCA 58.222 42.857 10.11 0.00 0.00 2.69
213 214 2.484264 AGTATTCGCAGTGCCTTTTCAC 59.516 45.455 10.11 0.43 37.24 3.18
214 215 0.598065 ATTCGCAGTGCCTTTTCACC 59.402 50.000 10.11 0.00 37.68 4.02
215 216 0.749818 TTCGCAGTGCCTTTTCACCA 60.750 50.000 10.11 0.00 37.68 4.17
216 217 1.008538 CGCAGTGCCTTTTCACCAC 60.009 57.895 10.11 0.00 37.68 4.16
217 218 1.363807 GCAGTGCCTTTTCACCACC 59.636 57.895 2.85 0.00 37.68 4.61
218 219 1.391157 GCAGTGCCTTTTCACCACCA 61.391 55.000 2.85 0.00 37.68 4.17
219 220 1.110442 CAGTGCCTTTTCACCACCAA 58.890 50.000 0.00 0.00 37.68 3.67
220 221 1.111277 AGTGCCTTTTCACCACCAAC 58.889 50.000 0.00 0.00 37.68 3.77
221 222 0.820871 GTGCCTTTTCACCACCAACA 59.179 50.000 0.00 0.00 0.00 3.33
222 223 1.412343 GTGCCTTTTCACCACCAACAT 59.588 47.619 0.00 0.00 0.00 2.71
223 224 1.411977 TGCCTTTTCACCACCAACATG 59.588 47.619 0.00 0.00 0.00 3.21
224 225 1.686052 GCCTTTTCACCACCAACATGA 59.314 47.619 0.00 0.00 0.00 3.07
225 226 2.102252 GCCTTTTCACCACCAACATGAA 59.898 45.455 0.00 0.00 0.00 2.57
226 227 3.716601 CCTTTTCACCACCAACATGAAC 58.283 45.455 0.00 0.00 32.21 3.18
227 228 3.492482 CCTTTTCACCACCAACATGAACC 60.492 47.826 0.00 0.00 32.21 3.62
228 229 2.443958 TTCACCACCAACATGAACCA 57.556 45.000 0.00 0.00 0.00 3.67
229 230 1.979855 TCACCACCAACATGAACCAG 58.020 50.000 0.00 0.00 0.00 4.00
230 231 0.961019 CACCACCAACATGAACCAGG 59.039 55.000 0.00 0.00 0.00 4.45
231 232 0.827507 ACCACCAACATGAACCAGGC 60.828 55.000 0.00 0.00 0.00 4.85
232 233 1.580942 CACCAACATGAACCAGGCG 59.419 57.895 0.00 0.00 0.00 5.52
233 234 1.150536 ACCAACATGAACCAGGCGT 59.849 52.632 0.00 0.00 0.00 5.68
234 235 0.398696 ACCAACATGAACCAGGCGTA 59.601 50.000 0.00 0.00 0.00 4.42
235 236 1.086696 CCAACATGAACCAGGCGTAG 58.913 55.000 0.00 0.00 0.00 3.51
236 237 1.610624 CCAACATGAACCAGGCGTAGT 60.611 52.381 0.00 0.00 0.00 2.73
237 238 1.464608 CAACATGAACCAGGCGTAGTG 59.535 52.381 0.00 0.00 0.00 2.74
238 239 0.036388 ACATGAACCAGGCGTAGTGG 60.036 55.000 0.00 0.00 41.30 4.00
239 240 1.078426 ATGAACCAGGCGTAGTGGC 60.078 57.895 0.32 0.00 45.27 5.01
247 248 1.363080 GGCGTAGTGGCTAGCTACC 59.637 63.158 25.75 11.89 40.72 3.18
248 249 1.108132 GGCGTAGTGGCTAGCTACCT 61.108 60.000 25.75 15.91 40.72 3.08
249 250 0.311477 GCGTAGTGGCTAGCTACCTC 59.689 60.000 25.75 17.72 36.40 3.85
250 251 1.970092 CGTAGTGGCTAGCTACCTCT 58.030 55.000 25.75 11.67 36.40 3.69
251 252 1.604755 CGTAGTGGCTAGCTACCTCTG 59.395 57.143 25.75 11.08 36.40 3.35
252 253 2.745482 CGTAGTGGCTAGCTACCTCTGA 60.745 54.545 25.75 5.57 36.40 3.27
253 254 1.770294 AGTGGCTAGCTACCTCTGAC 58.230 55.000 25.75 1.01 30.03 3.51
254 255 0.747852 GTGGCTAGCTACCTCTGACC 59.252 60.000 19.79 0.00 0.00 4.02
255 256 0.335019 TGGCTAGCTACCTCTGACCA 59.665 55.000 15.72 0.00 0.00 4.02
256 257 0.747852 GGCTAGCTACCTCTGACCAC 59.252 60.000 15.72 0.00 0.00 4.16
257 258 1.475403 GCTAGCTACCTCTGACCACA 58.525 55.000 7.70 0.00 0.00 4.17
258 259 1.407258 GCTAGCTACCTCTGACCACAG 59.593 57.143 7.70 0.00 44.66 3.66
259 260 2.028130 CTAGCTACCTCTGACCACAGG 58.972 57.143 0.00 0.00 43.60 4.00
260 261 0.409876 AGCTACCTCTGACCACAGGA 59.590 55.000 0.00 0.00 43.60 3.86
261 262 0.820871 GCTACCTCTGACCACAGGAG 59.179 60.000 0.00 0.00 43.60 3.69
262 263 1.617263 GCTACCTCTGACCACAGGAGA 60.617 57.143 0.00 0.00 43.60 3.71
263 264 2.952702 GCTACCTCTGACCACAGGAGAT 60.953 54.545 0.00 0.00 43.60 2.75
264 265 2.334006 ACCTCTGACCACAGGAGATT 57.666 50.000 0.00 0.00 43.60 2.40
265 266 1.905215 ACCTCTGACCACAGGAGATTG 59.095 52.381 0.00 0.00 43.60 2.67
266 267 1.209019 CCTCTGACCACAGGAGATTGG 59.791 57.143 0.00 0.00 43.60 3.16
270 271 1.296715 ACCACAGGAGATTGGTCGC 59.703 57.895 0.00 0.00 42.86 5.19
271 272 1.811266 CCACAGGAGATTGGTCGCG 60.811 63.158 0.00 0.00 0.00 5.87
272 273 1.215382 CACAGGAGATTGGTCGCGA 59.785 57.895 3.71 3.71 0.00 5.87
273 274 0.803768 CACAGGAGATTGGTCGCGAG 60.804 60.000 10.24 0.00 0.00 5.03
274 275 1.251527 ACAGGAGATTGGTCGCGAGT 61.252 55.000 10.24 0.00 0.00 4.18
275 276 0.108615 CAGGAGATTGGTCGCGAGTT 60.109 55.000 10.24 0.00 0.00 3.01
276 277 0.173708 AGGAGATTGGTCGCGAGTTC 59.826 55.000 10.24 4.08 0.00 3.01
277 278 0.806492 GGAGATTGGTCGCGAGTTCC 60.806 60.000 10.24 8.44 0.00 3.62
278 279 1.140407 GAGATTGGTCGCGAGTTCCG 61.140 60.000 10.24 0.00 42.21 4.30
299 300 3.777807 CAGAATGCGGCGTATAGAAAG 57.222 47.619 11.68 0.00 0.00 2.62
300 301 3.123804 CAGAATGCGGCGTATAGAAAGT 58.876 45.455 11.68 0.00 0.00 2.66
301 302 3.182572 CAGAATGCGGCGTATAGAAAGTC 59.817 47.826 11.68 3.89 0.00 3.01
302 303 2.150397 ATGCGGCGTATAGAAAGTCC 57.850 50.000 9.21 0.00 0.00 3.85
303 304 0.103572 TGCGGCGTATAGAAAGTCCC 59.896 55.000 9.37 0.00 0.00 4.46
304 305 0.938168 GCGGCGTATAGAAAGTCCCG 60.938 60.000 9.37 0.00 37.43 5.14
305 306 0.938168 CGGCGTATAGAAAGTCCCGC 60.938 60.000 0.00 0.00 40.33 6.13
306 307 0.103572 GGCGTATAGAAAGTCCCGCA 59.896 55.000 0.00 0.00 42.63 5.69
307 308 1.270147 GGCGTATAGAAAGTCCCGCAT 60.270 52.381 0.00 0.00 42.63 4.73
308 309 2.059541 GCGTATAGAAAGTCCCGCATC 58.940 52.381 0.00 0.00 40.72 3.91
309 310 2.673833 CGTATAGAAAGTCCCGCATCC 58.326 52.381 0.00 0.00 0.00 3.51
310 311 2.296471 CGTATAGAAAGTCCCGCATCCT 59.704 50.000 0.00 0.00 0.00 3.24
311 312 3.504906 CGTATAGAAAGTCCCGCATCCTA 59.495 47.826 0.00 0.00 0.00 2.94
312 313 4.379603 CGTATAGAAAGTCCCGCATCCTAG 60.380 50.000 0.00 0.00 0.00 3.02
313 314 1.867363 AGAAAGTCCCGCATCCTAGT 58.133 50.000 0.00 0.00 0.00 2.57
314 315 3.028094 AGAAAGTCCCGCATCCTAGTA 57.972 47.619 0.00 0.00 0.00 1.82
315 316 2.694109 AGAAAGTCCCGCATCCTAGTAC 59.306 50.000 0.00 0.00 0.00 2.73
316 317 2.456073 AAGTCCCGCATCCTAGTACT 57.544 50.000 0.00 0.00 0.00 2.73
317 318 1.984066 AGTCCCGCATCCTAGTACTC 58.016 55.000 0.00 0.00 0.00 2.59
318 319 0.960286 GTCCCGCATCCTAGTACTCC 59.040 60.000 0.00 0.00 0.00 3.85
319 320 0.178970 TCCCGCATCCTAGTACTCCC 60.179 60.000 0.00 0.00 0.00 4.30
320 321 0.178958 CCCGCATCCTAGTACTCCCT 60.179 60.000 0.00 0.00 0.00 4.20
321 322 1.249407 CCGCATCCTAGTACTCCCTC 58.751 60.000 0.00 0.00 0.00 4.30
322 323 1.249407 CGCATCCTAGTACTCCCTCC 58.751 60.000 0.00 0.00 0.00 4.30
323 324 1.249407 GCATCCTAGTACTCCCTCCG 58.751 60.000 0.00 0.00 0.00 4.63
324 325 1.479021 GCATCCTAGTACTCCCTCCGT 60.479 57.143 0.00 0.00 0.00 4.69
325 326 2.946785 CATCCTAGTACTCCCTCCGTT 58.053 52.381 0.00 0.00 0.00 4.44
326 327 2.725221 TCCTAGTACTCCCTCCGTTC 57.275 55.000 0.00 0.00 0.00 3.95
327 328 1.213926 TCCTAGTACTCCCTCCGTTCC 59.786 57.143 0.00 0.00 0.00 3.62
328 329 1.064166 CCTAGTACTCCCTCCGTTCCA 60.064 57.143 0.00 0.00 0.00 3.53
329 330 2.622452 CCTAGTACTCCCTCCGTTCCAA 60.622 54.545 0.00 0.00 0.00 3.53
330 331 2.019807 AGTACTCCCTCCGTTCCAAA 57.980 50.000 0.00 0.00 0.00 3.28
331 332 2.332117 AGTACTCCCTCCGTTCCAAAA 58.668 47.619 0.00 0.00 0.00 2.44
332 333 2.910977 AGTACTCCCTCCGTTCCAAAAT 59.089 45.455 0.00 0.00 0.00 1.82
333 334 4.098894 AGTACTCCCTCCGTTCCAAAATA 58.901 43.478 0.00 0.00 0.00 1.40
334 335 4.720273 AGTACTCCCTCCGTTCCAAAATAT 59.280 41.667 0.00 0.00 0.00 1.28
335 336 5.901276 AGTACTCCCTCCGTTCCAAAATATA 59.099 40.000 0.00 0.00 0.00 0.86
336 337 5.291905 ACTCCCTCCGTTCCAAAATATAG 57.708 43.478 0.00 0.00 0.00 1.31
337 338 4.065789 CTCCCTCCGTTCCAAAATATAGC 58.934 47.826 0.00 0.00 0.00 2.97
338 339 2.806244 CCCTCCGTTCCAAAATATAGCG 59.194 50.000 0.00 0.00 0.00 4.26
339 340 2.223377 CCTCCGTTCCAAAATATAGCGC 59.777 50.000 0.00 0.00 0.00 5.92
340 341 1.862201 TCCGTTCCAAAATATAGCGCG 59.138 47.619 0.00 0.00 0.00 6.86
341 342 1.595794 CCGTTCCAAAATATAGCGCGT 59.404 47.619 8.43 0.00 0.00 6.01
342 343 2.348218 CCGTTCCAAAATATAGCGCGTC 60.348 50.000 8.43 0.00 0.00 5.19
343 344 2.348218 CGTTCCAAAATATAGCGCGTCC 60.348 50.000 8.43 0.00 0.00 4.79
344 345 2.870411 GTTCCAAAATATAGCGCGTCCT 59.130 45.455 8.43 0.00 0.00 3.85
345 346 2.750948 TCCAAAATATAGCGCGTCCTC 58.249 47.619 8.43 0.00 0.00 3.71
346 347 1.455786 CCAAAATATAGCGCGTCCTCG 59.544 52.381 8.43 0.00 40.37 4.63
347 348 1.455786 CAAAATATAGCGCGTCCTCGG 59.544 52.381 8.43 0.00 37.56 4.63
348 349 0.672342 AAATATAGCGCGTCCTCGGT 59.328 50.000 8.43 0.00 43.07 4.69
349 350 0.672342 AATATAGCGCGTCCTCGGTT 59.328 50.000 8.43 0.00 40.82 4.44
350 351 0.672342 ATATAGCGCGTCCTCGGTTT 59.328 50.000 8.43 0.00 40.82 3.27
351 352 0.029834 TATAGCGCGTCCTCGGTTTC 59.970 55.000 8.43 0.00 40.82 2.78
352 353 2.624437 ATAGCGCGTCCTCGGTTTCC 62.624 60.000 8.43 0.00 40.82 3.13
362 363 4.914291 CGGTTTCCGTGCTTCAAC 57.086 55.556 0.00 0.00 42.73 3.18
363 364 2.317230 CGGTTTCCGTGCTTCAACT 58.683 52.632 0.00 0.00 42.73 3.16
364 365 0.661020 CGGTTTCCGTGCTTCAACTT 59.339 50.000 0.00 0.00 42.73 2.66
365 366 1.064952 CGGTTTCCGTGCTTCAACTTT 59.935 47.619 0.00 0.00 42.73 2.66
366 367 2.459934 GGTTTCCGTGCTTCAACTTTG 58.540 47.619 0.00 0.00 0.00 2.77
367 368 2.098443 GGTTTCCGTGCTTCAACTTTGA 59.902 45.455 0.00 0.00 34.92 2.69
368 369 3.105937 GTTTCCGTGCTTCAACTTTGAC 58.894 45.455 0.00 0.00 36.83 3.18
369 370 1.305201 TCCGTGCTTCAACTTTGACC 58.695 50.000 0.00 0.00 36.83 4.02
370 371 1.021202 CCGTGCTTCAACTTTGACCA 58.979 50.000 0.00 0.00 36.83 4.02
371 372 1.608590 CCGTGCTTCAACTTTGACCAT 59.391 47.619 0.00 0.00 36.83 3.55
372 373 2.034558 CCGTGCTTCAACTTTGACCATT 59.965 45.455 0.00 0.00 36.83 3.16
373 374 3.252215 CCGTGCTTCAACTTTGACCATTA 59.748 43.478 0.00 0.00 36.83 1.90
374 375 4.261405 CCGTGCTTCAACTTTGACCATTAA 60.261 41.667 0.00 0.00 36.83 1.40
375 376 5.460646 CGTGCTTCAACTTTGACCATTAAT 58.539 37.500 0.00 0.00 36.83 1.40
376 377 5.920273 CGTGCTTCAACTTTGACCATTAATT 59.080 36.000 0.00 0.00 36.83 1.40
377 378 6.420604 CGTGCTTCAACTTTGACCATTAATTT 59.579 34.615 0.00 0.00 36.83 1.82
378 379 7.593273 CGTGCTTCAACTTTGACCATTAATTTA 59.407 33.333 0.00 0.00 36.83 1.40
379 380 9.255304 GTGCTTCAACTTTGACCATTAATTTAA 57.745 29.630 0.00 0.00 36.83 1.52
380 381 9.995003 TGCTTCAACTTTGACCATTAATTTAAT 57.005 25.926 0.00 0.00 36.83 1.40
390 391 9.921637 TTGACCATTAATTTAATCAACAAGACC 57.078 29.630 0.00 0.00 0.00 3.85
391 392 8.240682 TGACCATTAATTTAATCAACAAGACCG 58.759 33.333 0.00 0.00 0.00 4.79
392 393 8.343168 ACCATTAATTTAATCAACAAGACCGA 57.657 30.769 0.00 0.00 0.00 4.69
393 394 8.966868 ACCATTAATTTAATCAACAAGACCGAT 58.033 29.630 0.00 0.00 0.00 4.18
394 395 9.801873 CCATTAATTTAATCAACAAGACCGATT 57.198 29.630 0.00 0.00 33.98 3.34
396 397 8.682128 TTAATTTAATCAACAAGACCGATTGC 57.318 30.769 0.00 0.00 33.28 3.56
397 398 2.900122 AATCAACAAGACCGATTGCG 57.100 45.000 0.00 0.00 33.28 4.85
471 472 2.793278 ATAATTTTTGATCCCGCCGC 57.207 45.000 0.00 0.00 0.00 6.53
472 473 1.464734 TAATTTTTGATCCCGCCGCA 58.535 45.000 0.00 0.00 0.00 5.69
473 474 0.173255 AATTTTTGATCCCGCCGCAG 59.827 50.000 0.00 0.00 0.00 5.18
474 475 0.965363 ATTTTTGATCCCGCCGCAGT 60.965 50.000 0.00 0.00 0.00 4.40
475 476 1.582610 TTTTTGATCCCGCCGCAGTC 61.583 55.000 0.00 0.00 0.00 3.51
476 477 4.812476 TTGATCCCGCCGCAGTCG 62.812 66.667 0.00 0.00 0.00 4.18
486 487 4.778415 CGCAGTCGGTCTCGTGGG 62.778 72.222 0.00 0.00 37.69 4.61
487 488 3.681835 GCAGTCGGTCTCGTGGGT 61.682 66.667 0.00 0.00 37.69 4.51
488 489 3.048602 CAGTCGGTCTCGTGGGTT 58.951 61.111 0.00 0.00 37.69 4.11
489 490 1.870055 GCAGTCGGTCTCGTGGGTTA 61.870 60.000 0.00 0.00 37.69 2.85
490 491 0.599558 CAGTCGGTCTCGTGGGTTAA 59.400 55.000 0.00 0.00 37.69 2.01
491 492 1.203994 CAGTCGGTCTCGTGGGTTAAT 59.796 52.381 0.00 0.00 37.69 1.40
492 493 1.897802 AGTCGGTCTCGTGGGTTAATT 59.102 47.619 0.00 0.00 37.69 1.40
493 494 2.301009 AGTCGGTCTCGTGGGTTAATTT 59.699 45.455 0.00 0.00 37.69 1.82
494 495 3.511146 AGTCGGTCTCGTGGGTTAATTTA 59.489 43.478 0.00 0.00 37.69 1.40
495 496 4.161001 AGTCGGTCTCGTGGGTTAATTTAT 59.839 41.667 0.00 0.00 37.69 1.40
496 497 4.269363 GTCGGTCTCGTGGGTTAATTTATG 59.731 45.833 0.00 0.00 37.69 1.90
497 498 3.558418 CGGTCTCGTGGGTTAATTTATGG 59.442 47.826 0.00 0.00 0.00 2.74
498 499 4.520179 GGTCTCGTGGGTTAATTTATGGT 58.480 43.478 0.00 0.00 0.00 3.55
499 500 4.573607 GGTCTCGTGGGTTAATTTATGGTC 59.426 45.833 0.00 0.00 0.00 4.02
500 501 5.180271 GTCTCGTGGGTTAATTTATGGTCA 58.820 41.667 0.00 0.00 0.00 4.02
501 502 5.644636 GTCTCGTGGGTTAATTTATGGTCAA 59.355 40.000 0.00 0.00 0.00 3.18
502 503 6.149807 GTCTCGTGGGTTAATTTATGGTCAAA 59.850 38.462 0.00 0.00 0.00 2.69
503 504 6.373216 TCTCGTGGGTTAATTTATGGTCAAAG 59.627 38.462 0.00 0.00 0.00 2.77
504 505 6.005198 TCGTGGGTTAATTTATGGTCAAAGT 58.995 36.000 0.00 0.00 0.00 2.66
505 506 6.490721 TCGTGGGTTAATTTATGGTCAAAGTT 59.509 34.615 0.00 0.00 0.00 2.66
506 507 6.584563 CGTGGGTTAATTTATGGTCAAAGTTG 59.415 38.462 0.00 0.00 0.00 3.16
507 508 7.522399 CGTGGGTTAATTTATGGTCAAAGTTGA 60.522 37.037 0.00 0.00 34.20 3.18
508 509 8.145122 GTGGGTTAATTTATGGTCAAAGTTGAA 58.855 33.333 0.00 0.00 39.21 2.69
509 510 8.875168 TGGGTTAATTTATGGTCAAAGTTGAAT 58.125 29.630 0.00 0.00 39.21 2.57
510 511 9.366216 GGGTTAATTTATGGTCAAAGTTGAATC 57.634 33.333 0.00 0.00 39.21 2.52
514 515 7.921786 ATTTATGGTCAAAGTTGAATCTCGA 57.078 32.000 0.00 0.00 39.21 4.04
515 516 7.737972 TTTATGGTCAAAGTTGAATCTCGAA 57.262 32.000 0.00 0.00 39.21 3.71
516 517 7.737972 TTATGGTCAAAGTTGAATCTCGAAA 57.262 32.000 0.00 0.00 39.21 3.46
517 518 6.633500 ATGGTCAAAGTTGAATCTCGAAAA 57.367 33.333 0.00 0.00 39.21 2.29
518 519 6.060028 TGGTCAAAGTTGAATCTCGAAAAG 57.940 37.500 0.00 0.00 39.21 2.27
519 520 4.912187 GGTCAAAGTTGAATCTCGAAAAGC 59.088 41.667 0.00 0.00 39.21 3.51
520 521 4.608882 GTCAAAGTTGAATCTCGAAAAGCG 59.391 41.667 0.00 0.00 39.21 4.68
521 522 4.272504 TCAAAGTTGAATCTCGAAAAGCGT 59.727 37.500 0.00 0.00 36.33 5.07
522 523 3.795561 AGTTGAATCTCGAAAAGCGTG 57.204 42.857 0.00 0.00 41.80 5.34
523 524 2.480419 AGTTGAATCTCGAAAAGCGTGG 59.520 45.455 0.00 0.00 41.80 4.94
524 525 1.438651 TGAATCTCGAAAAGCGTGGG 58.561 50.000 0.00 0.00 41.80 4.61
525 526 0.097150 GAATCTCGAAAAGCGTGGGC 59.903 55.000 0.00 0.00 41.80 5.36
526 527 1.635663 AATCTCGAAAAGCGTGGGCG 61.636 55.000 0.00 0.00 46.35 6.13
536 537 3.637714 CGTGGGCGCGCTATATTT 58.362 55.556 32.29 0.00 0.00 1.40
537 538 1.938861 CGTGGGCGCGCTATATTTT 59.061 52.632 32.29 0.00 0.00 1.82
538 539 0.384230 CGTGGGCGCGCTATATTTTG 60.384 55.000 32.29 9.06 0.00 2.44
539 540 0.040425 GTGGGCGCGCTATATTTTGG 60.040 55.000 32.29 0.00 0.00 3.28
540 541 0.179043 TGGGCGCGCTATATTTTGGA 60.179 50.000 32.29 0.00 0.00 3.53
541 542 0.948678 GGGCGCGCTATATTTTGGAA 59.051 50.000 32.29 0.00 0.00 3.53
542 543 1.334689 GGGCGCGCTATATTTTGGAAC 60.335 52.381 32.29 8.93 0.00 3.62
543 544 1.658968 GCGCGCTATATTTTGGAACG 58.341 50.000 26.67 0.00 0.00 3.95
544 545 1.659211 GCGCGCTATATTTTGGAACGG 60.659 52.381 26.67 0.00 0.00 4.44
545 546 1.862201 CGCGCTATATTTTGGAACGGA 59.138 47.619 5.56 0.00 0.00 4.69
546 547 2.096909 CGCGCTATATTTTGGAACGGAG 60.097 50.000 5.56 0.00 0.00 4.63
547 548 2.223377 GCGCTATATTTTGGAACGGAGG 59.777 50.000 0.00 0.00 0.00 4.30
548 549 2.806244 CGCTATATTTTGGAACGGAGGG 59.194 50.000 0.00 0.00 0.00 4.30
549 550 3.493699 CGCTATATTTTGGAACGGAGGGA 60.494 47.826 0.00 0.00 0.00 4.20
550 551 4.065789 GCTATATTTTGGAACGGAGGGAG 58.934 47.826 0.00 0.00 0.00 4.30
551 552 4.444449 GCTATATTTTGGAACGGAGGGAGT 60.444 45.833 0.00 0.00 0.00 3.85
552 553 5.221581 GCTATATTTTGGAACGGAGGGAGTA 60.222 44.000 0.00 0.00 0.00 2.59
553 554 5.703730 ATATTTTGGAACGGAGGGAGTAA 57.296 39.130 0.00 0.00 0.00 2.24
554 555 4.586306 ATTTTGGAACGGAGGGAGTAAT 57.414 40.909 0.00 0.00 0.00 1.89
555 556 4.376225 TTTTGGAACGGAGGGAGTAATT 57.624 40.909 0.00 0.00 0.00 1.40
556 557 4.376225 TTTGGAACGGAGGGAGTAATTT 57.624 40.909 0.00 0.00 0.00 1.82
557 558 3.343941 TGGAACGGAGGGAGTAATTTG 57.656 47.619 0.00 0.00 0.00 2.32
558 559 2.026636 TGGAACGGAGGGAGTAATTTGG 60.027 50.000 0.00 0.00 0.00 3.28
559 560 2.237893 GGAACGGAGGGAGTAATTTGGA 59.762 50.000 0.00 0.00 0.00 3.53
560 561 3.307904 GGAACGGAGGGAGTAATTTGGAA 60.308 47.826 0.00 0.00 0.00 3.53
561 562 3.345508 ACGGAGGGAGTAATTTGGAAC 57.654 47.619 0.00 0.00 0.00 3.62
562 563 2.910977 ACGGAGGGAGTAATTTGGAACT 59.089 45.455 0.00 0.00 0.00 3.01
563 564 3.270877 CGGAGGGAGTAATTTGGAACTG 58.729 50.000 0.00 0.00 0.00 3.16
564 565 3.055385 CGGAGGGAGTAATTTGGAACTGA 60.055 47.826 0.00 0.00 0.00 3.41
565 566 4.262617 GGAGGGAGTAATTTGGAACTGAC 58.737 47.826 0.00 0.00 0.00 3.51
566 567 4.263331 GGAGGGAGTAATTTGGAACTGACA 60.263 45.833 0.00 0.00 0.00 3.58
567 568 5.501156 GAGGGAGTAATTTGGAACTGACAT 58.499 41.667 0.00 0.00 0.00 3.06
568 569 5.256474 AGGGAGTAATTTGGAACTGACATG 58.744 41.667 0.00 0.00 0.00 3.21
569 570 4.142381 GGGAGTAATTTGGAACTGACATGC 60.142 45.833 0.00 0.00 0.00 4.06
570 571 4.437390 GGAGTAATTTGGAACTGACATGCG 60.437 45.833 0.00 0.00 0.00 4.73
571 572 3.440173 AGTAATTTGGAACTGACATGCGG 59.560 43.478 0.00 0.00 0.00 5.69
572 573 1.176527 ATTTGGAACTGACATGCGGG 58.823 50.000 0.00 0.00 0.00 6.13
573 574 0.893270 TTTGGAACTGACATGCGGGG 60.893 55.000 0.00 0.00 0.00 5.73
574 575 3.134127 GGAACTGACATGCGGGGC 61.134 66.667 0.00 0.00 0.00 5.80
575 576 3.134127 GAACTGACATGCGGGGCC 61.134 66.667 0.00 0.00 0.00 5.80
576 577 3.628646 GAACTGACATGCGGGGCCT 62.629 63.158 0.84 0.00 0.00 5.19
577 578 3.925630 AACTGACATGCGGGGCCTG 62.926 63.158 8.39 8.39 0.00 4.85
578 579 4.415150 CTGACATGCGGGGCCTGT 62.415 66.667 15.16 4.83 39.86 4.00
579 580 4.720902 TGACATGCGGGGCCTGTG 62.721 66.667 15.16 7.87 37.51 3.66
580 581 4.722700 GACATGCGGGGCCTGTGT 62.723 66.667 15.16 11.45 37.51 3.72
581 582 4.722700 ACATGCGGGGCCTGTGTC 62.723 66.667 15.16 0.00 36.18 3.67
582 583 4.720902 CATGCGGGGCCTGTGTCA 62.721 66.667 15.16 3.69 0.00 3.58
583 584 4.722700 ATGCGGGGCCTGTGTCAC 62.723 66.667 15.16 0.00 0.00 3.67
609 610 2.268920 CAGCCCATACCACTGCGT 59.731 61.111 0.00 0.00 0.00 5.24
755 756 0.174162 GCATGGCACCAAACCATCTC 59.826 55.000 0.00 0.00 44.85 2.75
855 856 3.898509 GCACGCCAACTGCCAACA 61.899 61.111 0.00 0.00 36.24 3.33
936 992 0.101759 CCATCCAAGCATTGCTTCCG 59.898 55.000 20.75 13.66 46.77 4.30
941 997 0.804364 CAAGCATTGCTTCCGCTGTA 59.196 50.000 20.75 0.00 46.77 2.74
973 1029 1.007964 CCGAGGCAGAGCAGATACG 60.008 63.158 0.00 0.00 0.00 3.06
974 1030 1.729470 CCGAGGCAGAGCAGATACGT 61.729 60.000 0.00 0.00 0.00 3.57
976 1032 1.334239 CGAGGCAGAGCAGATACGTAC 60.334 57.143 0.00 0.00 0.00 3.67
980 1036 0.311165 CAGAGCAGATACGTACCCGG 59.689 60.000 0.00 0.00 38.78 5.73
1010 1066 4.707768 TCCGTCCATGGGGTCCGT 62.708 66.667 13.02 0.00 34.93 4.69
1524 1714 2.126071 CACCTACACCACGAGGCG 60.126 66.667 0.00 0.00 39.06 5.52
1668 1858 4.335647 AGGGTCAAGGGCACGCTG 62.336 66.667 0.00 0.00 35.81 5.18
1710 1900 1.746615 CATGTGGGGCAAGGTCTCG 60.747 63.158 0.00 0.00 0.00 4.04
1752 1942 1.298713 CGGCATCCTTCTCGTCGAG 60.299 63.158 16.33 16.33 0.00 4.04
1815 2005 2.031919 AAGCGCACCATCACCGAA 59.968 55.556 11.47 0.00 0.00 4.30
2169 2359 4.856607 GACGAGAAGGAGGCCGCG 62.857 72.222 0.00 0.00 0.00 6.46
2329 2519 3.742882 CGGCGTCAAGATATGATCATGTT 59.257 43.478 18.72 5.58 40.97 2.71
2330 2520 4.923281 CGGCGTCAAGATATGATCATGTTA 59.077 41.667 18.72 0.00 40.97 2.41
2356 2546 6.594788 ATTCTATTGTGTGAAAATGCCAGT 57.405 33.333 0.00 0.00 0.00 4.00
2551 2746 2.092968 TCTAGCCCATTTGCTTGACGAT 60.093 45.455 0.00 0.00 42.75 3.73
2588 2783 1.198713 CTACAGTGGGAGCCAGATGT 58.801 55.000 0.00 0.00 38.00 3.06
2641 2843 9.770097 GATGATTAGAGATTTTGTGTCATCCTA 57.230 33.333 0.00 0.00 36.41 2.94
2654 2856 4.454504 GTGTCATCCTACGTGACCAAAATT 59.545 41.667 0.00 0.00 44.10 1.82
2658 2860 5.644636 TCATCCTACGTGACCAAAATTTACC 59.355 40.000 0.00 0.00 0.00 2.85
2668 2870 3.570975 ACCAAAATTTACCGGGAGAACAC 59.429 43.478 6.32 0.00 0.00 3.32
2690 3008 3.058160 GCCGCACATGAGTTGCCT 61.058 61.111 0.00 0.00 0.00 4.75
2698 3016 4.260375 CGCACATGAGTTGCCTAGTTAATC 60.260 45.833 0.00 0.00 0.00 1.75
2708 3026 6.719370 AGTTGCCTAGTTAATCATGAAAACCA 59.281 34.615 16.55 6.50 0.00 3.67
2710 3028 6.480763 TGCCTAGTTAATCATGAAAACCAGA 58.519 36.000 16.19 6.31 0.00 3.86
2712 3030 8.271458 TGCCTAGTTAATCATGAAAACCAGATA 58.729 33.333 16.19 6.26 0.00 1.98
2731 3049 6.320164 CCAGATAAAAACCGATACAAATGGGA 59.680 38.462 0.00 0.00 34.71 4.37
2736 3054 2.718563 ACCGATACAAATGGGACCAAC 58.281 47.619 0.00 0.00 34.71 3.77
2737 3055 2.307686 ACCGATACAAATGGGACCAACT 59.692 45.455 0.00 0.00 34.71 3.16
2772 3090 1.071299 GCCAAGCCAACCCCTTTTG 59.929 57.895 0.00 0.00 0.00 2.44
2809 3128 0.591236 CACCAAACTTGCCAACGACG 60.591 55.000 0.00 0.00 0.00 5.12
2920 3241 2.838693 GGCCCGGGACTCTCCTAC 60.839 72.222 29.31 1.68 36.57 3.18
2937 3258 2.151202 CTACGTGCCACAGGTTTTGAT 58.849 47.619 0.00 0.00 34.30 2.57
2938 3259 2.264005 ACGTGCCACAGGTTTTGATA 57.736 45.000 0.00 0.00 0.00 2.15
2939 3260 1.877443 ACGTGCCACAGGTTTTGATAC 59.123 47.619 0.00 0.00 0.00 2.24
2940 3261 1.876799 CGTGCCACAGGTTTTGATACA 59.123 47.619 0.00 0.00 0.00 2.29
2941 3262 2.487762 CGTGCCACAGGTTTTGATACAT 59.512 45.455 0.00 0.00 0.00 2.29
2942 3263 3.057596 CGTGCCACAGGTTTTGATACATT 60.058 43.478 0.00 0.00 0.00 2.71
2943 3264 4.558496 CGTGCCACAGGTTTTGATACATTT 60.558 41.667 0.00 0.00 0.00 2.32
2944 3265 4.685628 GTGCCACAGGTTTTGATACATTTG 59.314 41.667 0.00 0.00 0.00 2.32
2945 3266 4.343526 TGCCACAGGTTTTGATACATTTGT 59.656 37.500 0.00 0.00 0.00 2.83
2946 3267 5.163364 TGCCACAGGTTTTGATACATTTGTT 60.163 36.000 0.00 0.00 0.00 2.83
2947 3268 5.757808 GCCACAGGTTTTGATACATTTGTTT 59.242 36.000 0.00 0.00 0.00 2.83
2948 3269 6.259829 GCCACAGGTTTTGATACATTTGTTTT 59.740 34.615 0.00 0.00 0.00 2.43
2949 3270 7.201688 GCCACAGGTTTTGATACATTTGTTTTT 60.202 33.333 0.00 0.00 0.00 1.94
2969 3290 6.465439 TTTTTGAAAAGGAGAAAGACCCTC 57.535 37.500 0.00 0.00 31.17 4.30
2970 3291 3.402628 TGAAAAGGAGAAAGACCCTCG 57.597 47.619 0.00 0.00 31.17 4.63
2971 3292 2.038557 TGAAAAGGAGAAAGACCCTCGG 59.961 50.000 0.00 0.00 31.17 4.63
2972 3293 0.325272 AAAGGAGAAAGACCCTCGGC 59.675 55.000 0.00 0.00 31.17 5.54
2973 3294 1.554583 AAGGAGAAAGACCCTCGGCC 61.555 60.000 0.00 0.00 31.17 6.13
2974 3295 1.990614 GGAGAAAGACCCTCGGCCT 60.991 63.158 0.00 0.00 0.00 5.19
2975 3296 1.518302 GAGAAAGACCCTCGGCCTC 59.482 63.158 0.00 0.00 0.00 4.70
2976 3297 0.973496 GAGAAAGACCCTCGGCCTCT 60.973 60.000 0.00 0.00 0.00 3.69
2977 3298 0.335361 AGAAAGACCCTCGGCCTCTA 59.665 55.000 0.00 0.00 0.00 2.43
2978 3299 0.460722 GAAAGACCCTCGGCCTCTAC 59.539 60.000 0.00 0.00 0.00 2.59
2979 3300 0.252103 AAAGACCCTCGGCCTCTACA 60.252 55.000 0.00 0.00 0.00 2.74
2980 3301 0.032017 AAGACCCTCGGCCTCTACAT 60.032 55.000 0.00 0.00 0.00 2.29
2981 3302 0.468400 AGACCCTCGGCCTCTACATC 60.468 60.000 0.00 0.00 0.00 3.06
2982 3303 0.468400 GACCCTCGGCCTCTACATCT 60.468 60.000 0.00 0.00 0.00 2.90
2983 3304 0.757188 ACCCTCGGCCTCTACATCTG 60.757 60.000 0.00 0.00 0.00 2.90
2984 3305 1.467678 CCCTCGGCCTCTACATCTGG 61.468 65.000 0.00 0.00 0.00 3.86
2985 3306 1.467678 CCTCGGCCTCTACATCTGGG 61.468 65.000 0.00 0.00 0.00 4.45
2986 3307 0.757188 CTCGGCCTCTACATCTGGGT 60.757 60.000 0.00 0.00 0.00 4.51
2987 3308 1.043116 TCGGCCTCTACATCTGGGTG 61.043 60.000 0.00 0.00 0.00 4.61
2988 3309 1.043116 CGGCCTCTACATCTGGGTGA 61.043 60.000 0.00 0.00 0.00 4.02
2989 3310 1.428869 GGCCTCTACATCTGGGTGAT 58.571 55.000 0.00 0.00 35.40 3.06
2997 3318 1.100510 CATCTGGGTGATGCAACAGG 58.899 55.000 0.00 0.00 44.96 4.00
2998 3319 0.700564 ATCTGGGTGATGCAACAGGT 59.299 50.000 0.00 0.00 33.43 4.00
2999 3320 0.478072 TCTGGGTGATGCAACAGGTT 59.522 50.000 0.00 0.00 0.00 3.50
3000 3321 1.133513 TCTGGGTGATGCAACAGGTTT 60.134 47.619 0.00 0.00 0.00 3.27
3001 3322 1.688197 CTGGGTGATGCAACAGGTTTT 59.312 47.619 0.00 0.00 0.00 2.43
3002 3323 1.686052 TGGGTGATGCAACAGGTTTTC 59.314 47.619 0.00 0.00 0.00 2.29
3003 3324 1.686052 GGGTGATGCAACAGGTTTTCA 59.314 47.619 0.00 0.00 0.00 2.69
3004 3325 2.299867 GGGTGATGCAACAGGTTTTCAT 59.700 45.455 0.00 0.00 0.00 2.57
3034 3355 3.732212 TCATGCCTGATTGTAATCGAGG 58.268 45.455 13.87 13.87 38.26 4.63
3045 3366 9.869844 CTGATTGTAATCGAGGATAATTGAAAC 57.130 33.333 0.00 0.00 38.26 2.78
3067 3388 5.219739 ACATAAGAGCTCCCTTTATCCTCA 58.780 41.667 10.93 0.00 0.00 3.86
3139 3460 1.798813 GCCGCCATTTGTATGAGCAAC 60.799 52.381 0.00 0.00 33.37 4.17
3158 3479 4.152580 GCAACTGAGCAGAGTAAAGTAACC 59.847 45.833 4.21 0.00 0.00 2.85
3174 3495 0.599558 AACCTGTGTGATGCATGCAC 59.400 50.000 25.37 17.16 36.81 4.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 9.171877 ACATTGAAAAACAGGAGCATTTAAAAA 57.828 25.926 0.00 0.00 0.00 1.94
22 23 8.729805 ACATTGAAAAACAGGAGCATTTAAAA 57.270 26.923 0.00 0.00 0.00 1.52
23 24 8.729805 AACATTGAAAAACAGGAGCATTTAAA 57.270 26.923 0.00 0.00 0.00 1.52
24 25 8.610896 CAAACATTGAAAAACAGGAGCATTTAA 58.389 29.630 0.00 0.00 0.00 1.52
25 26 7.768120 ACAAACATTGAAAAACAGGAGCATTTA 59.232 29.630 0.00 0.00 0.00 1.40
26 27 6.598850 ACAAACATTGAAAAACAGGAGCATTT 59.401 30.769 0.00 0.00 0.00 2.32
27 28 6.114767 ACAAACATTGAAAAACAGGAGCATT 58.885 32.000 0.00 0.00 0.00 3.56
28 29 5.673514 ACAAACATTGAAAAACAGGAGCAT 58.326 33.333 0.00 0.00 0.00 3.79
29 30 5.083533 ACAAACATTGAAAAACAGGAGCA 57.916 34.783 0.00 0.00 0.00 4.26
30 31 4.507756 GGACAAACATTGAAAAACAGGAGC 59.492 41.667 0.00 0.00 0.00 4.70
31 32 5.519927 GTGGACAAACATTGAAAAACAGGAG 59.480 40.000 0.00 0.00 0.00 3.69
32 33 5.186797 AGTGGACAAACATTGAAAAACAGGA 59.813 36.000 0.00 0.00 0.00 3.86
33 34 5.418676 AGTGGACAAACATTGAAAAACAGG 58.581 37.500 0.00 0.00 0.00 4.00
34 35 7.257722 AGTAGTGGACAAACATTGAAAAACAG 58.742 34.615 0.00 0.00 0.00 3.16
35 36 7.164230 AGTAGTGGACAAACATTGAAAAACA 57.836 32.000 0.00 0.00 0.00 2.83
36 37 7.757624 TGAAGTAGTGGACAAACATTGAAAAAC 59.242 33.333 0.00 0.00 0.00 2.43
37 38 7.831753 TGAAGTAGTGGACAAACATTGAAAAA 58.168 30.769 0.00 0.00 0.00 1.94
38 39 7.397892 TGAAGTAGTGGACAAACATTGAAAA 57.602 32.000 0.00 0.00 0.00 2.29
39 40 7.397892 TTGAAGTAGTGGACAAACATTGAAA 57.602 32.000 0.00 0.00 0.00 2.69
40 41 7.397892 TTTGAAGTAGTGGACAAACATTGAA 57.602 32.000 0.00 0.00 0.00 2.69
41 42 7.397892 TTTTGAAGTAGTGGACAAACATTGA 57.602 32.000 0.00 0.00 33.09 2.57
42 43 8.647143 AATTTTGAAGTAGTGGACAAACATTG 57.353 30.769 0.00 0.00 33.09 2.82
46 47 9.836076 GGTATAATTTTGAAGTAGTGGACAAAC 57.164 33.333 0.00 0.00 33.09 2.93
47 48 9.802039 AGGTATAATTTTGAAGTAGTGGACAAA 57.198 29.630 0.00 0.00 0.00 2.83
48 49 9.802039 AAGGTATAATTTTGAAGTAGTGGACAA 57.198 29.630 0.00 0.00 0.00 3.18
49 50 9.802039 AAAGGTATAATTTTGAAGTAGTGGACA 57.198 29.630 0.00 0.00 0.00 4.02
79 80 9.212687 CGAACGTTTCTAACAGAACAAATTTTA 57.787 29.630 0.46 0.00 33.26 1.52
80 81 7.219344 CCGAACGTTTCTAACAGAACAAATTTT 59.781 33.333 0.46 0.00 33.26 1.82
81 82 6.689669 CCGAACGTTTCTAACAGAACAAATTT 59.310 34.615 0.46 0.00 33.26 1.82
82 83 6.037391 TCCGAACGTTTCTAACAGAACAAATT 59.963 34.615 0.46 0.00 33.26 1.82
83 84 5.524646 TCCGAACGTTTCTAACAGAACAAAT 59.475 36.000 0.46 0.00 33.26 2.32
84 85 4.869297 TCCGAACGTTTCTAACAGAACAAA 59.131 37.500 0.46 0.00 33.26 2.83
85 86 4.268405 GTCCGAACGTTTCTAACAGAACAA 59.732 41.667 0.46 0.00 33.26 2.83
86 87 3.798337 GTCCGAACGTTTCTAACAGAACA 59.202 43.478 0.46 0.00 33.26 3.18
87 88 4.047142 AGTCCGAACGTTTCTAACAGAAC 58.953 43.478 0.46 0.00 33.26 3.01
88 89 4.311816 AGTCCGAACGTTTCTAACAGAA 57.688 40.909 0.46 0.00 31.28 3.02
89 90 3.996150 AGTCCGAACGTTTCTAACAGA 57.004 42.857 0.46 0.00 0.00 3.41
90 91 5.005971 TCAAAAGTCCGAACGTTTCTAACAG 59.994 40.000 0.46 0.00 35.31 3.16
91 92 4.869297 TCAAAAGTCCGAACGTTTCTAACA 59.131 37.500 0.46 0.00 35.31 2.41
92 93 5.232838 TCTCAAAAGTCCGAACGTTTCTAAC 59.767 40.000 0.46 0.00 35.31 2.34
93 94 5.350633 TCTCAAAAGTCCGAACGTTTCTAA 58.649 37.500 0.46 0.00 35.31 2.10
94 95 4.935702 TCTCAAAAGTCCGAACGTTTCTA 58.064 39.130 0.46 0.00 35.31 2.10
95 96 3.788937 TCTCAAAAGTCCGAACGTTTCT 58.211 40.909 0.46 0.00 35.31 2.52
96 97 4.525411 TTCTCAAAAGTCCGAACGTTTC 57.475 40.909 0.46 0.00 35.31 2.78
97 98 4.950434 TTTCTCAAAAGTCCGAACGTTT 57.050 36.364 0.46 0.00 37.53 3.60
98 99 4.154556 TGTTTTCTCAAAAGTCCGAACGTT 59.845 37.500 0.00 0.00 0.00 3.99
99 100 3.685756 TGTTTTCTCAAAAGTCCGAACGT 59.314 39.130 0.00 0.00 0.00 3.99
100 101 4.267357 TGTTTTCTCAAAAGTCCGAACG 57.733 40.909 0.00 0.00 0.00 3.95
101 102 8.073768 TGAATATGTTTTCTCAAAAGTCCGAAC 58.926 33.333 0.00 0.00 0.00 3.95
102 103 8.160521 TGAATATGTTTTCTCAAAAGTCCGAA 57.839 30.769 0.00 0.00 0.00 4.30
103 104 7.659799 TCTGAATATGTTTTCTCAAAAGTCCGA 59.340 33.333 0.00 0.00 0.00 4.55
104 105 7.746475 GTCTGAATATGTTTTCTCAAAAGTCCG 59.254 37.037 0.00 0.00 0.00 4.79
105 106 8.787852 AGTCTGAATATGTTTTCTCAAAAGTCC 58.212 33.333 0.00 0.00 0.00 3.85
112 113 9.554395 TGTGTAAAGTCTGAATATGTTTTCTCA 57.446 29.630 0.00 0.00 0.00 3.27
116 117 9.744468 GGTTTGTGTAAAGTCTGAATATGTTTT 57.256 29.630 0.00 0.00 0.00 2.43
117 118 8.073768 CGGTTTGTGTAAAGTCTGAATATGTTT 58.926 33.333 0.00 0.00 0.00 2.83
118 119 7.442969 TCGGTTTGTGTAAAGTCTGAATATGTT 59.557 33.333 0.00 0.00 0.00 2.71
119 120 6.932400 TCGGTTTGTGTAAAGTCTGAATATGT 59.068 34.615 0.00 0.00 0.00 2.29
120 121 7.359262 TCGGTTTGTGTAAAGTCTGAATATG 57.641 36.000 0.00 0.00 0.00 1.78
121 122 7.010183 CGATCGGTTTGTGTAAAGTCTGAATAT 59.990 37.037 7.38 0.00 0.00 1.28
122 123 6.309494 CGATCGGTTTGTGTAAAGTCTGAATA 59.691 38.462 7.38 0.00 0.00 1.75
123 124 5.120208 CGATCGGTTTGTGTAAAGTCTGAAT 59.880 40.000 7.38 0.00 0.00 2.57
124 125 4.446385 CGATCGGTTTGTGTAAAGTCTGAA 59.554 41.667 7.38 0.00 0.00 3.02
125 126 3.985279 CGATCGGTTTGTGTAAAGTCTGA 59.015 43.478 7.38 0.00 0.00 3.27
126 127 3.985279 TCGATCGGTTTGTGTAAAGTCTG 59.015 43.478 16.41 0.00 0.00 3.51
127 128 4.022589 TCTCGATCGGTTTGTGTAAAGTCT 60.023 41.667 16.41 0.00 0.00 3.24
128 129 4.232221 TCTCGATCGGTTTGTGTAAAGTC 58.768 43.478 16.41 0.00 0.00 3.01
129 130 4.022589 TCTCTCGATCGGTTTGTGTAAAGT 60.023 41.667 16.41 0.00 0.00 2.66
130 131 4.482386 TCTCTCGATCGGTTTGTGTAAAG 58.518 43.478 16.41 0.80 0.00 1.85
131 132 4.508461 TCTCTCGATCGGTTTGTGTAAA 57.492 40.909 16.41 0.00 0.00 2.01
132 133 4.482386 CTTCTCTCGATCGGTTTGTGTAA 58.518 43.478 16.41 0.00 0.00 2.41
133 134 3.119602 CCTTCTCTCGATCGGTTTGTGTA 60.120 47.826 16.41 0.00 0.00 2.90
134 135 2.352814 CCTTCTCTCGATCGGTTTGTGT 60.353 50.000 16.41 0.00 0.00 3.72
135 136 2.094700 TCCTTCTCTCGATCGGTTTGTG 60.095 50.000 16.41 4.92 0.00 3.33
136 137 2.168496 TCCTTCTCTCGATCGGTTTGT 58.832 47.619 16.41 0.00 0.00 2.83
137 138 2.941453 TCCTTCTCTCGATCGGTTTG 57.059 50.000 16.41 3.76 0.00 2.93
138 139 3.955650 TTTCCTTCTCTCGATCGGTTT 57.044 42.857 16.41 0.00 0.00 3.27
139 140 3.955650 TTTTCCTTCTCTCGATCGGTT 57.044 42.857 16.41 0.00 0.00 4.44
140 141 3.006537 TGTTTTTCCTTCTCTCGATCGGT 59.993 43.478 16.41 0.00 0.00 4.69
141 142 3.585862 TGTTTTTCCTTCTCTCGATCGG 58.414 45.455 16.41 6.26 0.00 4.18
142 143 5.220491 GGATTGTTTTTCCTTCTCTCGATCG 60.220 44.000 9.36 9.36 0.00 3.69
143 144 5.220491 CGGATTGTTTTTCCTTCTCTCGATC 60.220 44.000 0.00 0.00 0.00 3.69
144 145 4.631813 CGGATTGTTTTTCCTTCTCTCGAT 59.368 41.667 0.00 0.00 0.00 3.59
145 146 3.994392 CGGATTGTTTTTCCTTCTCTCGA 59.006 43.478 0.00 0.00 0.00 4.04
146 147 3.994392 TCGGATTGTTTTTCCTTCTCTCG 59.006 43.478 0.00 0.00 0.00 4.04
147 148 4.154375 GGTCGGATTGTTTTTCCTTCTCTC 59.846 45.833 0.00 0.00 0.00 3.20
148 149 4.072839 GGTCGGATTGTTTTTCCTTCTCT 58.927 43.478 0.00 0.00 0.00 3.10
149 150 4.072839 AGGTCGGATTGTTTTTCCTTCTC 58.927 43.478 0.00 0.00 0.00 2.87
150 151 3.821033 CAGGTCGGATTGTTTTTCCTTCT 59.179 43.478 0.00 0.00 0.00 2.85
151 152 3.611766 GCAGGTCGGATTGTTTTTCCTTC 60.612 47.826 0.00 0.00 0.00 3.46
152 153 2.296190 GCAGGTCGGATTGTTTTTCCTT 59.704 45.455 0.00 0.00 0.00 3.36
153 154 1.886542 GCAGGTCGGATTGTTTTTCCT 59.113 47.619 0.00 0.00 0.00 3.36
154 155 1.067846 GGCAGGTCGGATTGTTTTTCC 60.068 52.381 0.00 0.00 0.00 3.13
155 156 1.401018 CGGCAGGTCGGATTGTTTTTC 60.401 52.381 0.00 0.00 0.00 2.29
156 157 0.596082 CGGCAGGTCGGATTGTTTTT 59.404 50.000 0.00 0.00 0.00 1.94
157 158 0.250553 TCGGCAGGTCGGATTGTTTT 60.251 50.000 0.00 0.00 0.00 2.43
158 159 0.035439 ATCGGCAGGTCGGATTGTTT 60.035 50.000 0.00 0.00 31.59 2.83
159 160 0.744414 CATCGGCAGGTCGGATTGTT 60.744 55.000 0.00 0.00 33.12 2.83
160 161 1.153369 CATCGGCAGGTCGGATTGT 60.153 57.895 0.00 0.00 33.12 2.71
161 162 2.537560 GCATCGGCAGGTCGGATTG 61.538 63.158 0.00 0.00 40.72 2.67
162 163 2.203070 GCATCGGCAGGTCGGATT 60.203 61.111 0.00 0.00 40.72 3.01
163 164 4.592192 CGCATCGGCAGGTCGGAT 62.592 66.667 0.00 0.00 41.24 4.18
166 167 2.990674 CTAGTCGCATCGGCAGGTCG 62.991 65.000 0.00 0.00 41.24 4.79
167 168 1.299468 CTAGTCGCATCGGCAGGTC 60.299 63.158 0.00 0.00 41.24 3.85
168 169 2.808315 CTAGTCGCATCGGCAGGT 59.192 61.111 0.00 0.00 41.24 4.00
169 170 2.659897 GCTAGTCGCATCGGCAGG 60.660 66.667 0.00 0.00 41.24 4.85
170 171 1.659954 GAGCTAGTCGCATCGGCAG 60.660 63.158 0.00 0.00 42.61 4.85
171 172 0.818040 TAGAGCTAGTCGCATCGGCA 60.818 55.000 0.00 0.00 42.61 5.69
172 173 0.523966 ATAGAGCTAGTCGCATCGGC 59.476 55.000 0.00 0.00 42.61 5.54
173 174 3.004171 ACTATAGAGCTAGTCGCATCGG 58.996 50.000 6.78 0.00 42.61 4.18
174 175 5.977171 ATACTATAGAGCTAGTCGCATCG 57.023 43.478 6.78 0.00 42.61 3.84
175 176 6.415702 CGAATACTATAGAGCTAGTCGCATC 58.584 44.000 6.78 0.00 42.61 3.91
176 177 5.220700 GCGAATACTATAGAGCTAGTCGCAT 60.221 44.000 25.77 0.00 43.74 4.73
177 178 4.093115 GCGAATACTATAGAGCTAGTCGCA 59.907 45.833 25.77 0.00 43.74 5.10
178 179 4.093115 TGCGAATACTATAGAGCTAGTCGC 59.907 45.833 24.79 24.79 44.09 5.19
179 180 5.349270 ACTGCGAATACTATAGAGCTAGTCG 59.651 44.000 6.78 10.09 33.96 4.18
180 181 6.539324 CACTGCGAATACTATAGAGCTAGTC 58.461 44.000 6.78 0.00 33.96 2.59
181 182 5.106475 GCACTGCGAATACTATAGAGCTAGT 60.106 44.000 6.78 7.23 36.04 2.57
182 183 5.328691 GCACTGCGAATACTATAGAGCTAG 58.671 45.833 6.78 6.73 0.00 3.42
183 184 4.156190 GGCACTGCGAATACTATAGAGCTA 59.844 45.833 6.78 0.00 0.00 3.32
184 185 3.057174 GGCACTGCGAATACTATAGAGCT 60.057 47.826 6.78 0.00 0.00 4.09
185 186 3.057174 AGGCACTGCGAATACTATAGAGC 60.057 47.826 6.78 4.62 37.18 4.09
186 187 4.775058 AGGCACTGCGAATACTATAGAG 57.225 45.455 6.78 0.00 37.18 2.43
187 188 5.531122 AAAGGCACTGCGAATACTATAGA 57.469 39.130 6.78 0.00 40.86 1.98
188 189 5.753438 TGAAAAGGCACTGCGAATACTATAG 59.247 40.000 0.00 0.00 40.86 1.31
189 190 5.522460 GTGAAAAGGCACTGCGAATACTATA 59.478 40.000 0.00 0.00 40.86 1.31
190 191 4.332819 GTGAAAAGGCACTGCGAATACTAT 59.667 41.667 0.00 0.00 40.86 2.12
191 192 3.682858 GTGAAAAGGCACTGCGAATACTA 59.317 43.478 0.00 0.00 40.86 1.82
192 193 2.484264 GTGAAAAGGCACTGCGAATACT 59.516 45.455 0.00 0.00 40.86 2.12
193 194 2.414161 GGTGAAAAGGCACTGCGAATAC 60.414 50.000 0.00 0.00 40.86 1.89
194 195 1.810151 GGTGAAAAGGCACTGCGAATA 59.190 47.619 0.00 0.00 40.86 1.75
195 196 0.598065 GGTGAAAAGGCACTGCGAAT 59.402 50.000 0.00 0.00 40.86 3.34
196 197 0.749818 TGGTGAAAAGGCACTGCGAA 60.750 50.000 0.00 0.00 40.86 4.70
197 198 1.153066 TGGTGAAAAGGCACTGCGA 60.153 52.632 0.00 0.00 40.86 5.10
198 199 1.008538 GTGGTGAAAAGGCACTGCG 60.009 57.895 0.00 0.00 40.86 5.18
199 200 1.363807 GGTGGTGAAAAGGCACTGC 59.636 57.895 0.00 0.00 40.86 4.40
200 201 1.110442 TTGGTGGTGAAAAGGCACTG 58.890 50.000 0.00 0.00 40.86 3.66
202 203 0.820871 TGTTGGTGGTGAAAAGGCAC 59.179 50.000 0.00 0.00 38.05 5.01
203 204 1.411977 CATGTTGGTGGTGAAAAGGCA 59.588 47.619 0.00 0.00 0.00 4.75
204 205 1.686052 TCATGTTGGTGGTGAAAAGGC 59.314 47.619 0.00 0.00 0.00 4.35
205 206 3.492482 GGTTCATGTTGGTGGTGAAAAGG 60.492 47.826 0.00 0.00 34.04 3.11
206 207 3.131933 TGGTTCATGTTGGTGGTGAAAAG 59.868 43.478 0.00 0.00 34.04 2.27
207 208 3.099905 TGGTTCATGTTGGTGGTGAAAA 58.900 40.909 0.00 0.00 34.04 2.29
208 209 2.692557 CTGGTTCATGTTGGTGGTGAAA 59.307 45.455 0.00 0.00 34.04 2.69
209 210 2.305928 CTGGTTCATGTTGGTGGTGAA 58.694 47.619 0.00 0.00 0.00 3.18
210 211 1.478471 CCTGGTTCATGTTGGTGGTGA 60.478 52.381 0.00 0.00 0.00 4.02
211 212 0.961019 CCTGGTTCATGTTGGTGGTG 59.039 55.000 0.00 0.00 0.00 4.17
212 213 0.827507 GCCTGGTTCATGTTGGTGGT 60.828 55.000 0.00 0.00 0.00 4.16
213 214 1.865788 CGCCTGGTTCATGTTGGTGG 61.866 60.000 0.00 0.00 0.00 4.61
214 215 1.172180 ACGCCTGGTTCATGTTGGTG 61.172 55.000 0.00 0.00 0.00 4.17
215 216 0.398696 TACGCCTGGTTCATGTTGGT 59.601 50.000 0.00 0.00 0.00 3.67
216 217 1.086696 CTACGCCTGGTTCATGTTGG 58.913 55.000 0.00 0.00 0.00 3.77
217 218 1.464608 CACTACGCCTGGTTCATGTTG 59.535 52.381 0.00 0.00 0.00 3.33
218 219 1.610624 CCACTACGCCTGGTTCATGTT 60.611 52.381 0.00 0.00 0.00 2.71
219 220 0.036388 CCACTACGCCTGGTTCATGT 60.036 55.000 0.00 0.00 0.00 3.21
220 221 1.369091 GCCACTACGCCTGGTTCATG 61.369 60.000 0.00 0.00 0.00 3.07
221 222 1.078426 GCCACTACGCCTGGTTCAT 60.078 57.895 0.00 0.00 0.00 2.57
222 223 0.901114 TAGCCACTACGCCTGGTTCA 60.901 55.000 0.00 0.00 0.00 3.18
223 224 0.179108 CTAGCCACTACGCCTGGTTC 60.179 60.000 0.00 0.00 0.00 3.62
224 225 1.898154 CTAGCCACTACGCCTGGTT 59.102 57.895 0.00 0.00 0.00 3.67
225 226 2.722201 GCTAGCCACTACGCCTGGT 61.722 63.158 2.29 0.00 0.00 4.00
226 227 1.107538 TAGCTAGCCACTACGCCTGG 61.108 60.000 12.13 0.00 0.00 4.45
227 228 0.030908 GTAGCTAGCCACTACGCCTG 59.969 60.000 12.13 0.00 31.42 4.85
228 229 1.108132 GGTAGCTAGCCACTACGCCT 61.108 60.000 12.13 0.00 40.78 5.52
229 230 1.108132 AGGTAGCTAGCCACTACGCC 61.108 60.000 19.06 1.20 40.78 5.68
230 231 0.311477 GAGGTAGCTAGCCACTACGC 59.689 60.000 19.06 2.57 40.78 4.42
231 232 1.604755 CAGAGGTAGCTAGCCACTACG 59.395 57.143 19.06 5.30 40.78 3.51
232 233 2.619646 GTCAGAGGTAGCTAGCCACTAC 59.380 54.545 19.06 7.59 39.44 2.73
233 234 2.423088 GGTCAGAGGTAGCTAGCCACTA 60.423 54.545 19.06 0.66 0.00 2.74
234 235 1.686741 GGTCAGAGGTAGCTAGCCACT 60.687 57.143 19.06 15.30 0.00 4.00
235 236 0.747852 GGTCAGAGGTAGCTAGCCAC 59.252 60.000 19.06 8.15 0.00 5.01
236 237 0.335019 TGGTCAGAGGTAGCTAGCCA 59.665 55.000 19.06 6.29 0.00 4.75
237 238 0.747852 GTGGTCAGAGGTAGCTAGCC 59.252 60.000 19.06 11.24 0.00 3.93
238 239 1.407258 CTGTGGTCAGAGGTAGCTAGC 59.593 57.143 15.19 15.19 43.76 3.42
239 240 2.028130 CCTGTGGTCAGAGGTAGCTAG 58.972 57.143 6.04 0.00 43.76 3.42
240 241 1.639108 TCCTGTGGTCAGAGGTAGCTA 59.361 52.381 12.92 0.00 43.76 3.32
241 242 0.409876 TCCTGTGGTCAGAGGTAGCT 59.590 55.000 12.92 0.00 43.76 3.32
242 243 0.820871 CTCCTGTGGTCAGAGGTAGC 59.179 60.000 12.92 0.00 43.76 3.58
243 244 2.516227 TCTCCTGTGGTCAGAGGTAG 57.484 55.000 12.92 9.58 43.76 3.18
244 245 3.099905 CAATCTCCTGTGGTCAGAGGTA 58.900 50.000 12.92 4.71 43.76 3.08
245 246 1.905215 CAATCTCCTGTGGTCAGAGGT 59.095 52.381 12.92 0.00 43.76 3.85
246 247 1.209019 CCAATCTCCTGTGGTCAGAGG 59.791 57.143 7.74 7.74 43.76 3.69
247 248 1.905215 ACCAATCTCCTGTGGTCAGAG 59.095 52.381 0.00 0.00 45.18 3.35
248 249 2.030027 ACCAATCTCCTGTGGTCAGA 57.970 50.000 0.00 0.00 45.18 3.27
253 254 1.811266 CGCGACCAATCTCCTGTGG 60.811 63.158 0.00 0.00 41.00 4.17
254 255 0.803768 CTCGCGACCAATCTCCTGTG 60.804 60.000 3.71 0.00 0.00 3.66
255 256 1.251527 ACTCGCGACCAATCTCCTGT 61.252 55.000 3.71 0.00 0.00 4.00
256 257 0.108615 AACTCGCGACCAATCTCCTG 60.109 55.000 3.71 0.00 0.00 3.86
257 258 0.173708 GAACTCGCGACCAATCTCCT 59.826 55.000 3.71 0.00 0.00 3.69
258 259 0.806492 GGAACTCGCGACCAATCTCC 60.806 60.000 3.71 1.01 0.00 3.71
259 260 1.140407 CGGAACTCGCGACCAATCTC 61.140 60.000 3.71 0.00 0.00 2.75
260 261 1.153823 CGGAACTCGCGACCAATCT 60.154 57.895 3.71 0.00 0.00 2.40
261 262 3.384927 CGGAACTCGCGACCAATC 58.615 61.111 3.71 0.52 0.00 2.67
278 279 1.497991 TTCTATACGCCGCATTCTGC 58.502 50.000 0.00 0.00 40.69 4.26
279 280 3.123804 ACTTTCTATACGCCGCATTCTG 58.876 45.455 0.00 0.00 0.00 3.02
280 281 3.381949 GACTTTCTATACGCCGCATTCT 58.618 45.455 0.00 0.00 0.00 2.40
281 282 2.475487 GGACTTTCTATACGCCGCATTC 59.525 50.000 0.00 0.00 0.00 2.67
282 283 2.480845 GGACTTTCTATACGCCGCATT 58.519 47.619 0.00 0.00 0.00 3.56
283 284 1.270147 GGGACTTTCTATACGCCGCAT 60.270 52.381 0.00 0.00 0.00 4.73
284 285 0.103572 GGGACTTTCTATACGCCGCA 59.896 55.000 0.00 0.00 0.00 5.69
285 286 0.938168 CGGGACTTTCTATACGCCGC 60.938 60.000 0.00 0.00 0.00 6.53
286 287 0.938168 GCGGGACTTTCTATACGCCG 60.938 60.000 0.00 0.00 41.02 6.46
287 288 0.103572 TGCGGGACTTTCTATACGCC 59.896 55.000 0.00 0.00 45.67 5.68
288 289 2.059541 GATGCGGGACTTTCTATACGC 58.940 52.381 0.00 0.00 46.34 4.42
289 290 2.296471 AGGATGCGGGACTTTCTATACG 59.704 50.000 0.00 0.00 0.00 3.06
290 291 4.523558 ACTAGGATGCGGGACTTTCTATAC 59.476 45.833 0.00 0.00 0.00 1.47
291 292 4.737578 ACTAGGATGCGGGACTTTCTATA 58.262 43.478 0.00 0.00 0.00 1.31
292 293 3.577919 ACTAGGATGCGGGACTTTCTAT 58.422 45.455 0.00 0.00 0.00 1.98
293 294 3.028094 ACTAGGATGCGGGACTTTCTA 57.972 47.619 0.00 0.00 0.00 2.10
294 295 1.867363 ACTAGGATGCGGGACTTTCT 58.133 50.000 0.00 0.00 0.00 2.52
295 296 2.694109 AGTACTAGGATGCGGGACTTTC 59.306 50.000 0.00 0.00 0.00 2.62
296 297 2.694109 GAGTACTAGGATGCGGGACTTT 59.306 50.000 0.00 0.00 0.00 2.66
297 298 2.308690 GAGTACTAGGATGCGGGACTT 58.691 52.381 0.00 0.00 0.00 3.01
298 299 1.479021 GGAGTACTAGGATGCGGGACT 60.479 57.143 0.00 0.00 0.00 3.85
299 300 0.960286 GGAGTACTAGGATGCGGGAC 59.040 60.000 0.00 0.00 0.00 4.46
300 301 0.178970 GGGAGTACTAGGATGCGGGA 60.179 60.000 0.00 0.00 0.00 5.14
301 302 0.178958 AGGGAGTACTAGGATGCGGG 60.179 60.000 0.00 0.00 0.00 6.13
302 303 1.249407 GAGGGAGTACTAGGATGCGG 58.751 60.000 0.00 0.00 0.00 5.69
303 304 1.249407 GGAGGGAGTACTAGGATGCG 58.751 60.000 0.00 0.00 0.00 4.73
304 305 1.249407 CGGAGGGAGTACTAGGATGC 58.751 60.000 0.00 0.00 0.00 3.91
305 306 2.660670 ACGGAGGGAGTACTAGGATG 57.339 55.000 0.00 0.00 0.00 3.51
306 307 2.158490 GGAACGGAGGGAGTACTAGGAT 60.158 54.545 0.00 0.00 0.00 3.24
307 308 1.213926 GGAACGGAGGGAGTACTAGGA 59.786 57.143 0.00 0.00 0.00 2.94
308 309 1.064166 TGGAACGGAGGGAGTACTAGG 60.064 57.143 0.00 0.00 0.00 3.02
309 310 2.431954 TGGAACGGAGGGAGTACTAG 57.568 55.000 0.00 0.00 0.00 2.57
310 311 2.905415 TTGGAACGGAGGGAGTACTA 57.095 50.000 0.00 0.00 0.00 1.82
311 312 2.019807 TTTGGAACGGAGGGAGTACT 57.980 50.000 0.00 0.00 0.00 2.73
312 313 2.845363 TTTTGGAACGGAGGGAGTAC 57.155 50.000 0.00 0.00 0.00 2.73
313 314 5.221581 GCTATATTTTGGAACGGAGGGAGTA 60.222 44.000 0.00 0.00 0.00 2.59
314 315 4.444449 GCTATATTTTGGAACGGAGGGAGT 60.444 45.833 0.00 0.00 0.00 3.85
315 316 4.065789 GCTATATTTTGGAACGGAGGGAG 58.934 47.826 0.00 0.00 0.00 4.30
316 317 3.493699 CGCTATATTTTGGAACGGAGGGA 60.494 47.826 0.00 0.00 0.00 4.20
317 318 2.806244 CGCTATATTTTGGAACGGAGGG 59.194 50.000 0.00 0.00 0.00 4.30
318 319 2.223377 GCGCTATATTTTGGAACGGAGG 59.777 50.000 0.00 0.00 0.00 4.30
319 320 2.096909 CGCGCTATATTTTGGAACGGAG 60.097 50.000 5.56 0.00 0.00 4.63
320 321 1.862201 CGCGCTATATTTTGGAACGGA 59.138 47.619 5.56 0.00 0.00 4.69
321 322 1.595794 ACGCGCTATATTTTGGAACGG 59.404 47.619 5.73 0.00 0.00 4.44
322 323 2.348218 GGACGCGCTATATTTTGGAACG 60.348 50.000 5.73 0.00 0.00 3.95
323 324 2.870411 AGGACGCGCTATATTTTGGAAC 59.130 45.455 5.73 0.00 0.00 3.62
324 325 3.128349 GAGGACGCGCTATATTTTGGAA 58.872 45.455 5.73 0.00 0.00 3.53
325 326 2.750948 GAGGACGCGCTATATTTTGGA 58.249 47.619 5.73 0.00 0.00 3.53
326 327 1.455786 CGAGGACGCGCTATATTTTGG 59.544 52.381 5.73 0.00 0.00 3.28
327 328 1.455786 CCGAGGACGCGCTATATTTTG 59.544 52.381 5.73 0.00 38.29 2.44
328 329 1.068127 ACCGAGGACGCGCTATATTTT 59.932 47.619 5.73 0.00 38.29 1.82
329 330 0.672342 ACCGAGGACGCGCTATATTT 59.328 50.000 5.73 0.00 38.29 1.40
330 331 0.672342 AACCGAGGACGCGCTATATT 59.328 50.000 5.73 0.00 38.29 1.28
331 332 0.672342 AAACCGAGGACGCGCTATAT 59.328 50.000 5.73 0.00 38.29 0.86
332 333 0.029834 GAAACCGAGGACGCGCTATA 59.970 55.000 5.73 0.00 38.29 1.31
333 334 1.226888 GAAACCGAGGACGCGCTAT 60.227 57.895 5.73 0.00 38.29 2.97
334 335 2.180017 GAAACCGAGGACGCGCTA 59.820 61.111 5.73 0.00 38.29 4.26
335 336 4.736896 GGAAACCGAGGACGCGCT 62.737 66.667 5.73 0.00 38.29 5.92
345 346 5.321388 TCAAAGTTGAAGCACGGAAACCG 62.321 47.826 8.67 8.67 43.00 4.44
346 347 2.098443 TCAAAGTTGAAGCACGGAAACC 59.902 45.455 0.00 0.00 33.55 3.27
347 348 3.105937 GTCAAAGTTGAAGCACGGAAAC 58.894 45.455 0.00 0.00 39.21 2.78
348 349 2.098443 GGTCAAAGTTGAAGCACGGAAA 59.902 45.455 0.00 0.00 39.21 3.13
349 350 1.673920 GGTCAAAGTTGAAGCACGGAA 59.326 47.619 0.00 0.00 39.21 4.30
350 351 1.305201 GGTCAAAGTTGAAGCACGGA 58.695 50.000 0.00 0.00 39.21 4.69
351 352 1.021202 TGGTCAAAGTTGAAGCACGG 58.979 50.000 0.00 0.00 39.21 4.94
352 353 3.354089 AATGGTCAAAGTTGAAGCACG 57.646 42.857 0.00 0.00 39.21 5.34
353 354 7.713764 AAATTAATGGTCAAAGTTGAAGCAC 57.286 32.000 0.00 0.00 39.21 4.40
354 355 9.995003 ATTAAATTAATGGTCAAAGTTGAAGCA 57.005 25.926 0.00 0.00 39.21 3.91
364 365 9.921637 GGTCTTGTTGATTAAATTAATGGTCAA 57.078 29.630 2.58 0.04 0.00 3.18
365 366 8.240682 CGGTCTTGTTGATTAAATTAATGGTCA 58.759 33.333 2.58 0.00 0.00 4.02
366 367 8.455682 TCGGTCTTGTTGATTAAATTAATGGTC 58.544 33.333 2.58 0.00 0.00 4.02
367 368 8.343168 TCGGTCTTGTTGATTAAATTAATGGT 57.657 30.769 2.58 0.00 0.00 3.55
368 369 9.801873 AATCGGTCTTGTTGATTAAATTAATGG 57.198 29.630 2.58 0.00 30.90 3.16
370 371 9.301153 GCAATCGGTCTTGTTGATTAAATTAAT 57.699 29.630 0.00 0.00 31.45 1.40
371 372 7.483375 CGCAATCGGTCTTGTTGATTAAATTAA 59.517 33.333 0.00 0.00 31.45 1.40
372 373 6.964370 CGCAATCGGTCTTGTTGATTAAATTA 59.036 34.615 0.00 0.00 31.45 1.40
373 374 5.799936 CGCAATCGGTCTTGTTGATTAAATT 59.200 36.000 0.00 0.00 31.45 1.82
374 375 5.331902 CGCAATCGGTCTTGTTGATTAAAT 58.668 37.500 0.00 0.00 31.45 1.40
375 376 4.717991 CGCAATCGGTCTTGTTGATTAAA 58.282 39.130 0.00 0.00 31.45 1.52
376 377 4.335082 CGCAATCGGTCTTGTTGATTAA 57.665 40.909 0.00 0.00 31.45 1.40
378 379 2.900122 CGCAATCGGTCTTGTTGATT 57.100 45.000 0.00 0.00 32.77 2.57
391 392 3.618710 TTTTTCGCCCGCCGCAATC 62.619 57.895 0.00 0.00 37.30 2.67
392 393 3.675563 TTTTTCGCCCGCCGCAAT 61.676 55.556 0.00 0.00 37.30 3.56
445 446 8.185505 GCGGCGGGATCAAAAATTATATAATTA 58.814 33.333 18.75 6.09 35.00 1.40
446 447 7.033185 GCGGCGGGATCAAAAATTATATAATT 58.967 34.615 13.85 13.85 37.49 1.40
447 448 6.151985 TGCGGCGGGATCAAAAATTATATAAT 59.848 34.615 9.78 1.91 0.00 1.28
448 449 5.473846 TGCGGCGGGATCAAAAATTATATAA 59.526 36.000 9.78 0.00 0.00 0.98
449 450 5.004448 TGCGGCGGGATCAAAAATTATATA 58.996 37.500 9.78 0.00 0.00 0.86
450 451 3.823873 TGCGGCGGGATCAAAAATTATAT 59.176 39.130 9.78 0.00 0.00 0.86
451 452 3.215151 TGCGGCGGGATCAAAAATTATA 58.785 40.909 9.78 0.00 0.00 0.98
452 453 2.028130 TGCGGCGGGATCAAAAATTAT 58.972 42.857 9.78 0.00 0.00 1.28
453 454 1.403679 CTGCGGCGGGATCAAAAATTA 59.596 47.619 9.78 0.00 0.00 1.40
454 455 0.173255 CTGCGGCGGGATCAAAAATT 59.827 50.000 9.78 0.00 0.00 1.82
455 456 0.965363 ACTGCGGCGGGATCAAAAAT 60.965 50.000 14.26 0.00 0.00 1.82
456 457 1.582610 GACTGCGGCGGGATCAAAAA 61.583 55.000 14.26 0.00 0.00 1.94
457 458 2.033448 ACTGCGGCGGGATCAAAA 59.967 55.556 14.26 0.00 0.00 2.44
458 459 2.435938 GACTGCGGCGGGATCAAA 60.436 61.111 14.26 0.00 0.00 2.69
459 460 4.812476 CGACTGCGGCGGGATCAA 62.812 66.667 14.26 0.00 0.00 2.57
469 470 4.778415 CCCACGAGACCGACTGCG 62.778 72.222 0.00 0.00 39.50 5.18
470 471 1.870055 TAACCCACGAGACCGACTGC 61.870 60.000 0.00 0.00 39.50 4.40
471 472 0.599558 TTAACCCACGAGACCGACTG 59.400 55.000 0.00 0.00 39.50 3.51
472 473 1.553706 ATTAACCCACGAGACCGACT 58.446 50.000 0.00 0.00 39.50 4.18
473 474 2.375173 AATTAACCCACGAGACCGAC 57.625 50.000 0.00 0.00 39.50 4.79
474 475 4.435425 CATAAATTAACCCACGAGACCGA 58.565 43.478 0.00 0.00 39.50 4.69
475 476 3.558418 CCATAAATTAACCCACGAGACCG 59.442 47.826 0.00 0.00 42.50 4.79
476 477 4.520179 ACCATAAATTAACCCACGAGACC 58.480 43.478 0.00 0.00 0.00 3.85
477 478 5.180271 TGACCATAAATTAACCCACGAGAC 58.820 41.667 0.00 0.00 0.00 3.36
478 479 5.423704 TGACCATAAATTAACCCACGAGA 57.576 39.130 0.00 0.00 0.00 4.04
479 480 6.150474 ACTTTGACCATAAATTAACCCACGAG 59.850 38.462 0.00 0.00 0.00 4.18
480 481 6.005198 ACTTTGACCATAAATTAACCCACGA 58.995 36.000 0.00 0.00 0.00 4.35
481 482 6.262193 ACTTTGACCATAAATTAACCCACG 57.738 37.500 0.00 0.00 0.00 4.94
482 483 7.662897 TCAACTTTGACCATAAATTAACCCAC 58.337 34.615 0.00 0.00 31.01 4.61
483 484 7.841282 TCAACTTTGACCATAAATTAACCCA 57.159 32.000 0.00 0.00 31.01 4.51
484 485 9.366216 GATTCAACTTTGACCATAAATTAACCC 57.634 33.333 0.00 0.00 36.83 4.11
488 489 9.443323 TCGAGATTCAACTTTGACCATAAATTA 57.557 29.630 0.00 0.00 36.83 1.40
489 490 8.335532 TCGAGATTCAACTTTGACCATAAATT 57.664 30.769 0.00 0.00 36.83 1.82
490 491 7.921786 TCGAGATTCAACTTTGACCATAAAT 57.078 32.000 0.00 0.00 36.83 1.40
491 492 7.737972 TTCGAGATTCAACTTTGACCATAAA 57.262 32.000 0.00 0.00 36.83 1.40
492 493 7.737972 TTTCGAGATTCAACTTTGACCATAA 57.262 32.000 0.00 0.00 36.83 1.90
493 494 7.573096 GCTTTTCGAGATTCAACTTTGACCATA 60.573 37.037 0.00 0.00 36.83 2.74
494 495 6.633500 TTTTCGAGATTCAACTTTGACCAT 57.367 33.333 0.00 0.00 36.83 3.55
495 496 5.505654 GCTTTTCGAGATTCAACTTTGACCA 60.506 40.000 0.00 0.00 36.83 4.02
496 497 4.912187 GCTTTTCGAGATTCAACTTTGACC 59.088 41.667 0.00 0.00 36.83 4.02
497 498 4.608882 CGCTTTTCGAGATTCAACTTTGAC 59.391 41.667 0.00 0.00 41.67 3.18
498 499 4.272504 ACGCTTTTCGAGATTCAACTTTGA 59.727 37.500 0.00 0.00 41.67 2.69
499 500 4.376861 CACGCTTTTCGAGATTCAACTTTG 59.623 41.667 0.00 0.00 41.67 2.77
500 501 4.527564 CACGCTTTTCGAGATTCAACTTT 58.472 39.130 0.00 0.00 41.67 2.66
501 502 3.058914 CCACGCTTTTCGAGATTCAACTT 60.059 43.478 0.00 0.00 41.67 2.66
502 503 2.480419 CCACGCTTTTCGAGATTCAACT 59.520 45.455 0.00 0.00 41.67 3.16
503 504 2.412847 CCCACGCTTTTCGAGATTCAAC 60.413 50.000 0.00 0.00 41.67 3.18
504 505 1.804151 CCCACGCTTTTCGAGATTCAA 59.196 47.619 0.00 0.00 41.67 2.69
505 506 1.438651 CCCACGCTTTTCGAGATTCA 58.561 50.000 0.00 0.00 41.67 2.57
506 507 0.097150 GCCCACGCTTTTCGAGATTC 59.903 55.000 0.00 0.00 41.67 2.52
507 508 1.635663 CGCCCACGCTTTTCGAGATT 61.636 55.000 0.00 0.00 41.67 2.40
508 509 2.100631 CGCCCACGCTTTTCGAGAT 61.101 57.895 0.00 0.00 41.67 2.75
509 510 2.736995 CGCCCACGCTTTTCGAGA 60.737 61.111 0.00 0.00 41.67 4.04
519 520 0.384230 CAAAATATAGCGCGCCCACG 60.384 55.000 30.33 4.40 44.07 4.94
520 521 0.040425 CCAAAATATAGCGCGCCCAC 60.040 55.000 30.33 0.00 0.00 4.61
521 522 0.179043 TCCAAAATATAGCGCGCCCA 60.179 50.000 30.33 17.44 0.00 5.36
522 523 0.948678 TTCCAAAATATAGCGCGCCC 59.051 50.000 30.33 0.16 0.00 6.13
523 524 1.659211 CGTTCCAAAATATAGCGCGCC 60.659 52.381 30.33 10.31 0.00 6.53
524 525 1.658968 CGTTCCAAAATATAGCGCGC 58.341 50.000 26.66 26.66 0.00 6.86
525 526 1.862201 TCCGTTCCAAAATATAGCGCG 59.138 47.619 0.00 0.00 0.00 6.86
526 527 2.223377 CCTCCGTTCCAAAATATAGCGC 59.777 50.000 0.00 0.00 0.00 5.92
527 528 2.806244 CCCTCCGTTCCAAAATATAGCG 59.194 50.000 0.00 0.00 0.00 4.26
528 529 4.065789 CTCCCTCCGTTCCAAAATATAGC 58.934 47.826 0.00 0.00 0.00 2.97
529 530 5.291905 ACTCCCTCCGTTCCAAAATATAG 57.708 43.478 0.00 0.00 0.00 1.31
530 531 6.811634 TTACTCCCTCCGTTCCAAAATATA 57.188 37.500 0.00 0.00 0.00 0.86
531 532 5.703730 TTACTCCCTCCGTTCCAAAATAT 57.296 39.130 0.00 0.00 0.00 1.28
532 533 5.703730 ATTACTCCCTCCGTTCCAAAATA 57.296 39.130 0.00 0.00 0.00 1.40
533 534 4.586306 ATTACTCCCTCCGTTCCAAAAT 57.414 40.909 0.00 0.00 0.00 1.82
534 535 4.376225 AATTACTCCCTCCGTTCCAAAA 57.624 40.909 0.00 0.00 0.00 2.44
535 536 4.076394 CAAATTACTCCCTCCGTTCCAAA 58.924 43.478 0.00 0.00 0.00 3.28
536 537 3.560453 CCAAATTACTCCCTCCGTTCCAA 60.560 47.826 0.00 0.00 0.00 3.53
537 538 2.026636 CCAAATTACTCCCTCCGTTCCA 60.027 50.000 0.00 0.00 0.00 3.53
538 539 2.237893 TCCAAATTACTCCCTCCGTTCC 59.762 50.000 0.00 0.00 0.00 3.62
539 540 3.622166 TCCAAATTACTCCCTCCGTTC 57.378 47.619 0.00 0.00 0.00 3.95
540 541 3.329814 AGTTCCAAATTACTCCCTCCGTT 59.670 43.478 0.00 0.00 0.00 4.44
541 542 2.910977 AGTTCCAAATTACTCCCTCCGT 59.089 45.455 0.00 0.00 0.00 4.69
542 543 3.055385 TCAGTTCCAAATTACTCCCTCCG 60.055 47.826 0.00 0.00 0.00 4.63
543 544 4.262617 GTCAGTTCCAAATTACTCCCTCC 58.737 47.826 0.00 0.00 0.00 4.30
544 545 4.906618 TGTCAGTTCCAAATTACTCCCTC 58.093 43.478 0.00 0.00 0.00 4.30
545 546 4.993705 TGTCAGTTCCAAATTACTCCCT 57.006 40.909 0.00 0.00 0.00 4.20
546 547 4.142381 GCATGTCAGTTCCAAATTACTCCC 60.142 45.833 0.00 0.00 0.00 4.30
547 548 4.437390 CGCATGTCAGTTCCAAATTACTCC 60.437 45.833 0.00 0.00 0.00 3.85
548 549 4.437390 CCGCATGTCAGTTCCAAATTACTC 60.437 45.833 0.00 0.00 0.00 2.59
549 550 3.440173 CCGCATGTCAGTTCCAAATTACT 59.560 43.478 0.00 0.00 0.00 2.24
550 551 3.427503 CCCGCATGTCAGTTCCAAATTAC 60.428 47.826 0.00 0.00 0.00 1.89
551 552 2.752354 CCCGCATGTCAGTTCCAAATTA 59.248 45.455 0.00 0.00 0.00 1.40
552 553 1.545582 CCCGCATGTCAGTTCCAAATT 59.454 47.619 0.00 0.00 0.00 1.82
553 554 1.176527 CCCGCATGTCAGTTCCAAAT 58.823 50.000 0.00 0.00 0.00 2.32
554 555 0.893270 CCCCGCATGTCAGTTCCAAA 60.893 55.000 0.00 0.00 0.00 3.28
555 556 1.303236 CCCCGCATGTCAGTTCCAA 60.303 57.895 0.00 0.00 0.00 3.53
556 557 2.350895 CCCCGCATGTCAGTTCCA 59.649 61.111 0.00 0.00 0.00 3.53
557 558 3.134127 GCCCCGCATGTCAGTTCC 61.134 66.667 0.00 0.00 0.00 3.62
558 559 3.134127 GGCCCCGCATGTCAGTTC 61.134 66.667 0.00 0.00 0.00 3.01
559 560 3.650950 AGGCCCCGCATGTCAGTT 61.651 61.111 0.00 0.00 0.00 3.16
560 561 4.415150 CAGGCCCCGCATGTCAGT 62.415 66.667 0.00 0.00 35.52 3.41
565 566 4.720902 TGACACAGGCCCCGCATG 62.721 66.667 0.00 0.00 46.22 4.06
566 567 4.722700 GTGACACAGGCCCCGCAT 62.723 66.667 0.00 0.00 0.00 4.73
574 575 4.704833 CCCGGGCTGTGACACAGG 62.705 72.222 31.47 18.63 46.01 4.00
602 603 1.278637 GAACCGGTCAAACGCAGTG 59.721 57.895 8.04 0.00 45.00 3.66
609 610 3.851098 CCAAAAACTTGAACCGGTCAAA 58.149 40.909 8.04 4.41 45.67 2.69
643 644 0.178861 AGGGCAGGAGAGAAAGGGAA 60.179 55.000 0.00 0.00 0.00 3.97
682 683 1.520564 TGTGTGTGTCAGCGTGGAC 60.521 57.895 2.20 2.20 38.29 4.02
755 756 0.396435 TGCTGGTTGACCTGGTAGTG 59.604 55.000 0.00 0.00 35.73 2.74
936 992 1.120437 GCGCAACAACTTTGTACAGC 58.880 50.000 0.30 0.28 41.31 4.40
941 997 1.355210 CTCGGCGCAACAACTTTGT 59.645 52.632 10.83 0.00 44.72 2.83
973 1029 4.185059 GACGCCTCGACCGGGTAC 62.185 72.222 6.32 0.00 0.00 3.34
1524 1714 2.182842 GTGGATGATGCTGGGCGAC 61.183 63.158 0.00 0.00 0.00 5.19
1527 1717 2.903855 CGGTGGATGATGCTGGGC 60.904 66.667 0.00 0.00 0.00 5.36
1752 1942 4.329545 TTCCTGCCCGACACCAGC 62.330 66.667 0.00 0.00 0.00 4.85
2131 2321 1.064296 CTTCCTCGTCATCGTCCCG 59.936 63.158 0.00 0.00 38.33 5.14
2139 2329 0.320160 TCTCGTCGTCTTCCTCGTCA 60.320 55.000 0.00 0.00 0.00 4.35
2169 2359 1.226435 CTCGTCGCTGCTGTAGTCC 60.226 63.158 0.00 0.00 0.00 3.85
2329 2519 8.800370 TGGCATTTTCACACAATAGAATAGTA 57.200 30.769 0.00 0.00 0.00 1.82
2330 2520 7.394359 ACTGGCATTTTCACACAATAGAATAGT 59.606 33.333 0.00 0.00 0.00 2.12
2497 2692 4.024556 GCGCACATTCAAAGATACTAGCAT 60.025 41.667 0.30 0.00 0.00 3.79
2501 2696 2.284150 GCGCGCACATTCAAAGATACTA 59.716 45.455 29.10 0.00 0.00 1.82
2502 2697 1.062587 GCGCGCACATTCAAAGATACT 59.937 47.619 29.10 0.00 0.00 2.12
2503 2698 1.202020 TGCGCGCACATTCAAAGATAC 60.202 47.619 33.09 0.00 0.00 2.24
2548 2743 5.227238 AGATGTTGCTGAAGCTTAAATCG 57.773 39.130 0.00 0.00 42.66 3.34
2551 2746 5.997746 ACTGTAGATGTTGCTGAAGCTTAAA 59.002 36.000 0.00 0.00 42.66 1.52
2588 2783 1.078214 CTCCTCGCAGCAATCCCAA 60.078 57.895 0.00 0.00 0.00 4.12
2591 2786 1.522580 GGTCTCCTCGCAGCAATCC 60.523 63.158 0.00 0.00 0.00 3.01
2593 2788 0.392193 CTTGGTCTCCTCGCAGCAAT 60.392 55.000 0.00 0.00 30.00 3.56
2596 2791 0.739112 CTTCTTGGTCTCCTCGCAGC 60.739 60.000 0.00 0.00 0.00 5.25
2599 2794 1.478510 TCATCTTCTTGGTCTCCTCGC 59.521 52.381 0.00 0.00 0.00 5.03
2638 2840 3.125658 CCGGTAAATTTTGGTCACGTAGG 59.874 47.826 0.00 0.00 0.00 3.18
2641 2843 1.881324 CCCGGTAAATTTTGGTCACGT 59.119 47.619 0.00 0.00 0.00 4.49
2654 2856 0.682852 CCACAGTGTTCTCCCGGTAA 59.317 55.000 0.00 0.00 0.00 2.85
2658 2860 2.358737 GGCCACAGTGTTCTCCCG 60.359 66.667 0.00 0.00 0.00 5.14
2698 3016 8.240682 TGTATCGGTTTTTATCTGGTTTTCATG 58.759 33.333 0.00 0.00 0.00 3.07
2708 3026 6.320418 GGTCCCATTTGTATCGGTTTTTATCT 59.680 38.462 0.00 0.00 0.00 1.98
2710 3028 5.952947 TGGTCCCATTTGTATCGGTTTTTAT 59.047 36.000 0.00 0.00 0.00 1.40
2712 3030 4.153411 TGGTCCCATTTGTATCGGTTTTT 58.847 39.130 0.00 0.00 0.00 1.94
2731 3049 1.458777 TGACGAGTGGGGAGTTGGT 60.459 57.895 0.00 0.00 0.00 3.67
2736 3054 1.219124 CCATGTGACGAGTGGGGAG 59.781 63.158 0.00 0.00 0.00 4.30
2737 3055 2.954684 GCCATGTGACGAGTGGGGA 61.955 63.158 0.00 0.00 33.58 4.81
2772 3090 2.110213 TGTCCTTGTGGTGCGACC 59.890 61.111 0.00 0.00 39.22 4.79
2809 3128 1.335324 GCTCCTGTGATGTTTGTGTGC 60.335 52.381 0.00 0.00 0.00 4.57
2904 3225 3.217743 CGTAGGAGAGTCCCGGGC 61.218 72.222 18.49 11.70 37.19 6.13
2920 3241 1.876799 TGTATCAAAACCTGTGGCACG 59.123 47.619 13.77 7.78 0.00 5.34
2946 3267 5.067283 CGAGGGTCTTTCTCCTTTTCAAAAA 59.933 40.000 0.00 0.00 32.74 1.94
2947 3268 4.578928 CGAGGGTCTTTCTCCTTTTCAAAA 59.421 41.667 0.00 0.00 32.74 2.44
2948 3269 4.134563 CGAGGGTCTTTCTCCTTTTCAAA 58.865 43.478 0.00 0.00 32.74 2.69
2949 3270 3.496160 CCGAGGGTCTTTCTCCTTTTCAA 60.496 47.826 0.00 0.00 32.74 2.69
2950 3271 2.038557 CCGAGGGTCTTTCTCCTTTTCA 59.961 50.000 0.00 0.00 32.74 2.69
2951 3272 2.701107 CCGAGGGTCTTTCTCCTTTTC 58.299 52.381 0.00 0.00 32.74 2.29
2952 3273 1.271434 GCCGAGGGTCTTTCTCCTTTT 60.271 52.381 0.00 0.00 32.74 2.27
2953 3274 0.325272 GCCGAGGGTCTTTCTCCTTT 59.675 55.000 0.00 0.00 32.74 3.11
2954 3275 1.554583 GGCCGAGGGTCTTTCTCCTT 61.555 60.000 0.00 0.00 32.74 3.36
2955 3276 1.990614 GGCCGAGGGTCTTTCTCCT 60.991 63.158 0.00 0.00 35.82 3.69
2956 3277 1.962321 GAGGCCGAGGGTCTTTCTCC 61.962 65.000 0.00 0.00 38.01 3.71
2957 3278 0.973496 AGAGGCCGAGGGTCTTTCTC 60.973 60.000 0.00 0.00 38.01 2.87
2958 3279 0.335361 TAGAGGCCGAGGGTCTTTCT 59.665 55.000 0.00 0.00 38.01 2.52
2959 3280 0.460722 GTAGAGGCCGAGGGTCTTTC 59.539 60.000 0.00 0.00 38.01 2.62
2960 3281 0.252103 TGTAGAGGCCGAGGGTCTTT 60.252 55.000 0.00 0.00 38.01 2.52
2961 3282 0.032017 ATGTAGAGGCCGAGGGTCTT 60.032 55.000 0.00 0.00 38.01 3.01
2962 3283 0.468400 GATGTAGAGGCCGAGGGTCT 60.468 60.000 0.00 0.00 42.15 3.85
2963 3284 0.468400 AGATGTAGAGGCCGAGGGTC 60.468 60.000 0.00 0.00 0.00 4.46
2964 3285 0.757188 CAGATGTAGAGGCCGAGGGT 60.757 60.000 0.00 0.00 0.00 4.34
2965 3286 1.467678 CCAGATGTAGAGGCCGAGGG 61.468 65.000 0.00 0.00 0.00 4.30
2966 3287 1.467678 CCCAGATGTAGAGGCCGAGG 61.468 65.000 0.00 0.00 0.00 4.63
2967 3288 0.757188 ACCCAGATGTAGAGGCCGAG 60.757 60.000 0.00 0.00 0.00 4.63
2968 3289 1.043116 CACCCAGATGTAGAGGCCGA 61.043 60.000 0.00 0.00 0.00 5.54
2969 3290 1.043116 TCACCCAGATGTAGAGGCCG 61.043 60.000 0.00 0.00 0.00 6.13
2970 3291 1.428869 ATCACCCAGATGTAGAGGCC 58.571 55.000 0.00 0.00 35.06 5.19
2979 3300 0.700564 ACCTGTTGCATCACCCAGAT 59.299 50.000 0.00 0.00 37.48 2.90
2980 3301 0.478072 AACCTGTTGCATCACCCAGA 59.522 50.000 0.00 0.00 0.00 3.86
2981 3302 1.331214 AAACCTGTTGCATCACCCAG 58.669 50.000 0.00 0.00 0.00 4.45
2982 3303 1.686052 GAAAACCTGTTGCATCACCCA 59.314 47.619 0.00 0.00 0.00 4.51
2983 3304 1.686052 TGAAAACCTGTTGCATCACCC 59.314 47.619 0.00 0.00 0.00 4.61
2984 3305 3.665745 ATGAAAACCTGTTGCATCACC 57.334 42.857 0.00 0.00 0.00 4.02
2985 3306 5.119931 TGTATGAAAACCTGTTGCATCAC 57.880 39.130 0.00 0.00 0.00 3.06
2986 3307 5.243507 ACATGTATGAAAACCTGTTGCATCA 59.756 36.000 0.00 0.00 0.00 3.07
2987 3308 5.713025 ACATGTATGAAAACCTGTTGCATC 58.287 37.500 0.00 0.00 0.00 3.91
2988 3309 5.726980 ACATGTATGAAAACCTGTTGCAT 57.273 34.783 0.00 4.68 0.00 3.96
2989 3310 6.641169 TTACATGTATGAAAACCTGTTGCA 57.359 33.333 6.36 0.00 31.75 4.08
2990 3311 7.312154 TGATTACATGTATGAAAACCTGTTGC 58.688 34.615 6.36 0.00 31.75 4.17
2991 3312 9.292846 CATGATTACATGTATGAAAACCTGTTG 57.707 33.333 6.36 0.00 46.01 3.33
3028 3349 8.153550 AGCTCTTATGTTTCAATTATCCTCGAT 58.846 33.333 0.00 0.00 0.00 3.59
3029 3350 7.500992 AGCTCTTATGTTTCAATTATCCTCGA 58.499 34.615 0.00 0.00 0.00 4.04
3031 3352 7.174080 GGGAGCTCTTATGTTTCAATTATCCTC 59.826 40.741 14.64 0.00 0.00 3.71
3032 3353 7.001073 GGGAGCTCTTATGTTTCAATTATCCT 58.999 38.462 14.64 0.00 0.00 3.24
3034 3355 8.457238 AAGGGAGCTCTTATGTTTCAATTATC 57.543 34.615 14.64 0.00 0.00 1.75
3045 3366 5.815233 TGAGGATAAAGGGAGCTCTTATG 57.185 43.478 14.64 0.00 0.00 1.90
3095 3416 4.475016 ACCCCATAGTTCAACTGCTAGATT 59.525 41.667 0.00 0.00 0.00 2.40
3139 3460 4.926238 CACAGGTTACTTTACTCTGCTCAG 59.074 45.833 0.00 0.00 0.00 3.35
3158 3479 1.268625 ACAAGTGCATGCATCACACAG 59.731 47.619 25.64 19.25 36.76 3.66
3174 3495 7.387673 TGACAAAGGAGAACATGTATGTACAAG 59.612 37.037 0.00 0.00 40.80 3.16
3240 3563 8.289618 GTCACTGTCACTAGATATTCTGATCTC 58.710 40.741 0.00 0.00 37.38 2.75


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.