Multiple sequence alignment - TraesCS7B01G401000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G401000 chr7B 100.000 4726 0 0 1 4726 667470496 667475221 0.000000e+00 8728.0
1 TraesCS7B01G401000 chr7B 93.284 134 7 2 3213 3345 219565280 219565148 3.730000e-46 196.0
2 TraesCS7B01G401000 chr7A 83.308 1306 88 54 1439 2672 686165515 686164268 0.000000e+00 1085.0
3 TraesCS7B01G401000 chr7A 86.494 733 56 25 718 1416 686166224 686165501 0.000000e+00 765.0
4 TraesCS7B01G401000 chr7A 87.500 512 26 20 3356 3849 686163539 686163048 1.490000e-154 556.0
5 TraesCS7B01G401000 chr7A 85.306 490 62 7 1 487 686167264 686166782 9.130000e-137 497.0
6 TraesCS7B01G401000 chr7A 87.943 423 30 9 2811 3220 686163963 686163549 3.310000e-131 479.0
7 TraesCS7B01G401000 chr7A 95.918 196 3 3 4534 4726 686162207 686162014 3.550000e-81 313.0
8 TraesCS7B01G401000 chr7A 87.356 261 14 6 3844 4102 686163021 686162778 1.000000e-71 281.0
9 TraesCS7B01G401000 chr7A 94.828 116 6 0 571 686 686166338 686166223 1.040000e-41 182.0
10 TraesCS7B01G401000 chr7D 88.956 824 39 27 3345 4124 593376054 593375239 0.000000e+00 970.0
11 TraesCS7B01G401000 chr7D 88.546 777 60 16 2453 3208 593376829 593376061 0.000000e+00 915.0
12 TraesCS7B01G401000 chr7D 82.198 1028 89 38 1485 2456 593377980 593376991 0.000000e+00 798.0
13 TraesCS7B01G401000 chr7D 86.164 730 70 24 702 1411 593378748 593378030 0.000000e+00 760.0
14 TraesCS7B01G401000 chr7D 87.018 285 23 7 4205 4488 593375209 593374938 4.590000e-80 309.0
15 TraesCS7B01G401000 chr7D 92.157 204 6 3 4532 4726 593374579 593374377 3.600000e-71 279.0
16 TraesCS7B01G401000 chr7D 87.742 155 17 2 3213 3367 40443830 40443982 3.760000e-41 180.0
17 TraesCS7B01G401000 chr7D 100.000 29 0 0 482 510 47327694 47327722 2.000000e-03 54.7
18 TraesCS7B01G401000 chr6B 85.564 381 26 12 1911 2284 322068011 322067653 5.780000e-99 372.0
19 TraesCS7B01G401000 chr6B 94.697 132 4 3 3217 3347 46658295 46658166 8.020000e-48 202.0
20 TraesCS7B01G401000 chr6B 93.939 132 7 1 3215 3346 354257310 354257180 1.040000e-46 198.0
21 TraesCS7B01G401000 chr6A 84.881 377 31 12 1911 2284 189413440 189413793 1.620000e-94 357.0
22 TraesCS7B01G401000 chr6A 84.350 377 34 11 1911 2284 130945421 130945775 3.500000e-91 346.0
23 TraesCS7B01G401000 chr1A 84.615 377 33 11 1911 2284 522898515 522898161 7.520000e-93 351.0
24 TraesCS7B01G401000 chr2A 84.350 377 33 12 1911 2284 554436213 554436566 3.500000e-91 346.0
25 TraesCS7B01G401000 chr2D 93.939 132 7 1 3217 3348 592467983 592468113 1.040000e-46 198.0
26 TraesCS7B01G401000 chr3A 93.939 132 5 3 3217 3347 736073173 736073302 3.730000e-46 196.0
27 TraesCS7B01G401000 chr3A 86.792 53 5 2 481 533 709157930 709157880 1.840000e-04 58.4
28 TraesCS7B01G401000 chr2B 93.284 134 6 3 3214 3346 77137382 77137513 1.340000e-45 195.0
29 TraesCS7B01G401000 chr2B 92.086 139 9 2 3212 3349 305317098 305317235 1.340000e-45 195.0
30 TraesCS7B01G401000 chr2B 92.029 138 10 1 3217 3354 378986160 378986024 4.830000e-45 193.0
31 TraesCS7B01G401000 chr2B 90.411 73 7 0 1911 1983 10409368 10409296 3.890000e-16 97.1
32 TraesCS7B01G401000 chr4B 88.136 59 4 3 1556 1613 103054025 103053969 3.050000e-07 67.6
33 TraesCS7B01G401000 chr6D 100.000 32 0 0 409 440 50680208 50680177 5.110000e-05 60.2
34 TraesCS7B01G401000 chr1D 82.353 68 10 1 482 549 362515837 362515772 1.840000e-04 58.4
35 TraesCS7B01G401000 chr1D 100.000 28 0 0 483 510 365888917 365888890 9.000000e-03 52.8
36 TraesCS7B01G401000 chr5D 100.000 29 0 0 482 510 545275622 545275594 2.000000e-03 54.7
37 TraesCS7B01G401000 chr5D 100.000 28 0 0 481 508 242571870 242571843 9.000000e-03 52.8
38 TraesCS7B01G401000 chr4A 100.000 29 0 0 482 510 735874476 735874448 2.000000e-03 54.7
39 TraesCS7B01G401000 chr5B 100.000 28 0 0 481 508 256050518 256050545 9.000000e-03 52.8
40 TraesCS7B01G401000 chr5A 100.000 28 0 0 481 508 309959472 309959499 9.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G401000 chr7B 667470496 667475221 4725 False 8728.000000 8728 100.000000 1 4726 1 chr7B.!!$F1 4725
1 TraesCS7B01G401000 chr7A 686162014 686167264 5250 True 519.750000 1085 88.581625 1 4726 8 chr7A.!!$R1 4725
2 TraesCS7B01G401000 chr7D 593374377 593378748 4371 True 671.833333 970 87.506500 702 4726 6 chr7D.!!$R1 4024

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
491 492 0.039035 TTGGAGCGGTAAGGGCATTT 59.961 50.0 0.00 0.00 0.0 2.32 F
688 1050 0.103390 TCTGTCGTTTTGCCTGTCGA 59.897 50.0 0.00 0.00 0.0 4.20 F
984 1366 0.108329 AGGTCACGATTAAGCACGGG 60.108 55.0 0.00 0.00 0.0 5.28 F
2544 3229 0.183492 AACCATGTCCGGGGATGATG 59.817 55.0 13.48 4.25 0.0 3.07 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2074 2589 0.179034 GGCGAGAATGGAAGATGCCT 60.179 55.0 0.00 0.0 38.00 4.75 R
2171 2686 0.794229 CAAATAACGCAGCACCGCAG 60.794 55.0 0.00 0.0 0.00 5.18 R
2942 3824 0.114364 AGGTTGATTTCGGGGCCTTT 59.886 50.0 0.84 0.0 0.00 3.11 R
4516 5699 0.032952 GTGGATCGGCCGTATAAGCA 59.967 55.0 27.15 3.4 40.66 3.91 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 3.710722 CCCGCTCCTCTTGGCAGT 61.711 66.667 0.00 0.00 0.00 4.40
38 39 1.448540 GCAGTGCTAGTGCCGATGT 60.449 57.895 8.18 0.00 38.58 3.06
39 40 1.424493 GCAGTGCTAGTGCCGATGTC 61.424 60.000 8.18 0.00 38.58 3.06
54 55 1.067212 GATGTCGGTATTGTCGAGCCT 59.933 52.381 0.00 0.00 37.31 4.58
134 135 4.344474 CGGATCTAGCCGGTCCGC 62.344 72.222 16.41 1.24 46.90 5.54
136 137 3.224324 GATCTAGCCGGTCCGCCA 61.224 66.667 5.50 0.00 34.09 5.69
137 138 2.524394 ATCTAGCCGGTCCGCCAT 60.524 61.111 5.50 0.00 34.09 4.40
138 139 2.493907 GATCTAGCCGGTCCGCCATC 62.494 65.000 5.50 0.00 34.09 3.51
139 140 3.227276 CTAGCCGGTCCGCCATCT 61.227 66.667 5.50 2.43 34.09 2.90
143 144 4.873129 CCGGTCCGCCATCTGTCG 62.873 72.222 5.50 0.00 34.09 4.35
144 145 4.873129 CGGTCCGCCATCTGTCGG 62.873 72.222 0.00 0.00 46.52 4.79
182 183 2.766925 TTGCCCTGCCCTCACACTT 61.767 57.895 0.00 0.00 0.00 3.16
183 184 2.674380 GCCCTGCCCTCACACTTG 60.674 66.667 0.00 0.00 0.00 3.16
198 199 0.759346 ACTTGAAGGACGAGCTGGTT 59.241 50.000 1.83 0.00 33.49 3.67
201 202 2.048127 AAGGACGAGCTGGTTCGC 60.048 61.111 1.83 0.00 44.15 4.70
202 203 2.765250 GAAGGACGAGCTGGTTCGCA 62.765 60.000 1.83 0.00 44.15 5.10
213 214 2.325082 GGTTCGCAGCAACATCCGT 61.325 57.895 9.14 0.00 0.00 4.69
215 216 1.301322 TTCGCAGCAACATCCGTCA 60.301 52.632 0.00 0.00 0.00 4.35
232 233 2.046314 ATTCCTTGACCACGGCGG 60.046 61.111 13.24 0.00 42.50 6.13
237 238 3.220999 CTTGACCACGGCGGAGACA 62.221 63.158 13.24 5.62 38.63 3.41
238 239 3.220999 TTGACCACGGCGGAGACAG 62.221 63.158 13.24 0.00 38.63 3.51
239 240 4.436998 GACCACGGCGGAGACAGG 62.437 72.222 13.24 5.54 38.63 4.00
269 270 2.964174 CCGCTGCAGAAATGGCAA 59.036 55.556 20.43 0.00 41.39 4.52
271 272 1.153901 CGCTGCAGAAATGGCAAGG 60.154 57.895 20.43 0.00 41.39 3.61
362 363 4.623814 CTCGCCAAGGAGCATGAA 57.376 55.556 0.00 0.00 0.00 2.57
373 374 0.815213 GAGCATGAATGTGCCGCCTA 60.815 55.000 0.00 0.00 46.19 3.93
375 376 0.815213 GCATGAATGTGCCGCCTAGA 60.815 55.000 0.00 0.00 39.18 2.43
384 385 2.815308 CCGCCTAGAAGCATCCGT 59.185 61.111 0.00 0.00 0.00 4.69
385 386 1.144057 CCGCCTAGAAGCATCCGTT 59.856 57.895 0.00 0.00 0.00 4.44
391 392 2.348666 CCTAGAAGCATCCGTTTTGTCG 59.651 50.000 0.00 0.00 0.00 4.35
403 404 2.368131 TTTTGTCGTGCACGGCTTCG 62.368 55.000 39.52 15.46 45.41 3.79
407 408 4.059459 CGTGCACGGCTTCGTCAC 62.059 66.667 31.15 0.00 46.38 3.67
411 412 2.651361 CACGGCTTCGTCACCTCT 59.349 61.111 0.00 0.00 46.38 3.69
412 413 1.006102 CACGGCTTCGTCACCTCTT 60.006 57.895 0.00 0.00 46.38 2.85
443 444 2.809601 CCCCGACGACTTCAAGCG 60.810 66.667 0.00 0.44 0.00 4.68
451 452 1.021390 CGACTTCAAGCGATGCCCTT 61.021 55.000 0.00 0.00 0.00 3.95
471 472 6.238648 CCCTTTCTTCCTACATGTAGTTTGT 58.761 40.000 27.07 0.00 0.00 2.83
478 479 5.001232 TCCTACATGTAGTTTGTTTGGAGC 58.999 41.667 27.07 0.00 30.40 4.70
484 485 3.810941 TGTAGTTTGTTTGGAGCGGTAAG 59.189 43.478 0.00 0.00 0.00 2.34
487 488 0.891904 TTGTTTGGAGCGGTAAGGGC 60.892 55.000 0.00 0.00 0.00 5.19
488 489 1.302993 GTTTGGAGCGGTAAGGGCA 60.303 57.895 0.00 0.00 0.00 5.36
491 492 0.039035 TTGGAGCGGTAAGGGCATTT 59.961 50.000 0.00 0.00 0.00 2.32
492 493 0.393808 TGGAGCGGTAAGGGCATTTC 60.394 55.000 0.00 0.00 0.00 2.17
493 494 0.107165 GGAGCGGTAAGGGCATTTCT 60.107 55.000 0.00 0.00 0.00 2.52
494 495 1.140252 GGAGCGGTAAGGGCATTTCTA 59.860 52.381 0.00 0.00 0.00 2.10
496 497 2.612672 GAGCGGTAAGGGCATTTCTAAC 59.387 50.000 0.00 0.00 0.00 2.34
498 499 1.937899 CGGTAAGGGCATTTCTAACCG 59.062 52.381 9.22 9.22 41.92 4.44
499 500 3.271055 GGTAAGGGCATTTCTAACCGA 57.729 47.619 0.00 0.00 0.00 4.69
501 502 3.813724 GGTAAGGGCATTTCTAACCGATC 59.186 47.826 0.00 0.00 0.00 3.69
502 503 2.640316 AGGGCATTTCTAACCGATCC 57.360 50.000 0.00 0.00 0.00 3.36
503 504 1.143073 AGGGCATTTCTAACCGATCCC 59.857 52.381 0.00 0.00 0.00 3.85
505 506 2.422945 GGGCATTTCTAACCGATCCCTT 60.423 50.000 0.00 0.00 0.00 3.95
506 507 3.181448 GGGCATTTCTAACCGATCCCTTA 60.181 47.826 0.00 0.00 0.00 2.69
507 508 4.506802 GGGCATTTCTAACCGATCCCTTAT 60.507 45.833 0.00 0.00 0.00 1.73
508 509 5.280317 GGGCATTTCTAACCGATCCCTTATA 60.280 44.000 0.00 0.00 0.00 0.98
510 511 6.713450 GGCATTTCTAACCGATCCCTTATAAA 59.287 38.462 0.00 0.00 0.00 1.40
511 512 7.229907 GGCATTTCTAACCGATCCCTTATAAAA 59.770 37.037 0.00 0.00 0.00 1.52
514 515 7.797038 TTCTAACCGATCCCTTATAAAAAGC 57.203 36.000 0.00 0.00 0.00 3.51
515 516 7.133133 TCTAACCGATCCCTTATAAAAAGCT 57.867 36.000 0.00 0.00 0.00 3.74
516 517 8.253867 TCTAACCGATCCCTTATAAAAAGCTA 57.746 34.615 0.00 0.00 0.00 3.32
518 519 9.333724 CTAACCGATCCCTTATAAAAAGCTAAA 57.666 33.333 0.00 0.00 0.00 1.85
519 520 8.584063 AACCGATCCCTTATAAAAAGCTAAAA 57.416 30.769 0.00 0.00 0.00 1.52
520 521 8.221965 ACCGATCCCTTATAAAAAGCTAAAAG 57.778 34.615 0.00 0.00 0.00 2.27
521 522 7.284716 ACCGATCCCTTATAAAAAGCTAAAAGG 59.715 37.037 0.00 0.00 34.54 3.11
522 523 7.139392 CGATCCCTTATAAAAAGCTAAAAGGC 58.861 38.462 0.00 0.00 33.63 4.35
523 524 7.201785 CGATCCCTTATAAAAAGCTAAAAGGCA 60.202 37.037 0.00 0.00 33.63 4.75
524 525 7.404671 TCCCTTATAAAAAGCTAAAAGGCAG 57.595 36.000 0.00 0.00 33.63 4.85
525 526 6.951778 TCCCTTATAAAAAGCTAAAAGGCAGT 59.048 34.615 0.00 0.00 33.63 4.40
526 527 8.110908 TCCCTTATAAAAAGCTAAAAGGCAGTA 58.889 33.333 0.00 0.00 33.63 2.74
527 528 8.745590 CCCTTATAAAAAGCTAAAAGGCAGTAA 58.254 33.333 0.00 0.00 33.63 2.24
536 537 9.559732 AAAGCTAAAAGGCAGTAAAAATTTGAT 57.440 25.926 0.00 0.00 34.17 2.57
546 547 8.914011 GGCAGTAAAAATTTGATTATACTCCCT 58.086 33.333 0.00 0.00 27.96 4.20
552 553 7.506328 AAATTTGATTATACTCCCTTACGGC 57.494 36.000 0.00 0.00 0.00 5.68
563 615 1.514014 CTTACGGCGCAATTGCACC 60.514 57.895 28.77 26.68 42.21 5.01
564 616 1.922135 CTTACGGCGCAATTGCACCT 61.922 55.000 29.51 20.28 40.92 4.00
565 617 0.673956 TTACGGCGCAATTGCACCTA 60.674 50.000 29.51 19.42 40.92 3.08
566 618 1.087202 TACGGCGCAATTGCACCTAG 61.087 55.000 29.51 19.70 40.92 3.02
567 619 2.102946 GGCGCAATTGCACCTAGC 59.897 61.111 26.65 21.19 39.99 3.42
568 620 2.102946 GCGCAATTGCACCTAGCC 59.897 61.111 28.77 6.17 44.83 3.93
569 621 2.404789 CGCAATTGCACCTAGCCG 59.595 61.111 28.77 7.24 44.83 5.52
649 1011 4.279169 ACCATGAGTGTCCAATTTCAGTTG 59.721 41.667 0.00 0.00 0.00 3.16
652 1014 3.559655 TGAGTGTCCAATTTCAGTTGACG 59.440 43.478 0.00 0.00 0.00 4.35
653 1015 3.804036 AGTGTCCAATTTCAGTTGACGA 58.196 40.909 0.00 0.00 0.00 4.20
665 1027 3.014085 TTGACGACCCATCCGAGCC 62.014 63.158 0.00 0.00 0.00 4.70
673 1035 1.599047 CCATCCGAGCCTTGTCTGT 59.401 57.895 0.00 0.00 0.00 3.41
677 1039 1.006102 CCGAGCCTTGTCTGTCGTT 60.006 57.895 0.00 0.00 0.00 3.85
680 1042 1.070577 CGAGCCTTGTCTGTCGTTTTG 60.071 52.381 0.00 0.00 0.00 2.44
681 1043 0.663153 AGCCTTGTCTGTCGTTTTGC 59.337 50.000 0.00 0.00 0.00 3.68
682 1044 0.317854 GCCTTGTCTGTCGTTTTGCC 60.318 55.000 0.00 0.00 0.00 4.52
683 1045 1.308998 CCTTGTCTGTCGTTTTGCCT 58.691 50.000 0.00 0.00 0.00 4.75
684 1046 1.002468 CCTTGTCTGTCGTTTTGCCTG 60.002 52.381 0.00 0.00 0.00 4.85
685 1047 1.670811 CTTGTCTGTCGTTTTGCCTGT 59.329 47.619 0.00 0.00 0.00 4.00
686 1048 1.295792 TGTCTGTCGTTTTGCCTGTC 58.704 50.000 0.00 0.00 0.00 3.51
687 1049 0.232303 GTCTGTCGTTTTGCCTGTCG 59.768 55.000 0.00 0.00 0.00 4.35
688 1050 0.103390 TCTGTCGTTTTGCCTGTCGA 59.897 50.000 0.00 0.00 0.00 4.20
689 1051 1.148310 CTGTCGTTTTGCCTGTCGAT 58.852 50.000 0.00 0.00 34.93 3.59
690 1052 1.126846 CTGTCGTTTTGCCTGTCGATC 59.873 52.381 0.00 0.00 34.93 3.69
691 1053 1.144969 GTCGTTTTGCCTGTCGATCA 58.855 50.000 0.00 0.00 34.93 2.92
692 1054 1.136336 GTCGTTTTGCCTGTCGATCAC 60.136 52.381 0.00 0.00 34.93 3.06
693 1055 1.148310 CGTTTTGCCTGTCGATCACT 58.852 50.000 0.00 0.00 0.00 3.41
694 1056 1.126846 CGTTTTGCCTGTCGATCACTC 59.873 52.381 0.00 0.00 0.00 3.51
695 1057 1.126846 GTTTTGCCTGTCGATCACTCG 59.873 52.381 0.00 0.00 46.41 4.18
713 1075 3.000819 ATCGGTTGGGCGGTCAGA 61.001 61.111 0.00 0.00 0.00 3.27
714 1076 2.907897 GATCGGTTGGGCGGTCAGAG 62.908 65.000 0.00 0.00 0.00 3.35
715 1077 3.691342 CGGTTGGGCGGTCAGAGA 61.691 66.667 0.00 0.00 0.00 3.10
716 1078 2.747686 GGTTGGGCGGTCAGAGAA 59.252 61.111 0.00 0.00 0.00 2.87
723 1085 1.675116 GGGCGGTCAGAGAAGTTAACC 60.675 57.143 0.88 0.00 0.00 2.85
744 1106 0.595588 CGCAGTGCATTAAACCCACA 59.404 50.000 16.83 0.00 32.09 4.17
751 1113 1.816224 GCATTAAACCCACACACCGAT 59.184 47.619 0.00 0.00 0.00 4.18
759 1121 2.094659 CACACACCGATCACCGCTC 61.095 63.158 0.00 0.00 36.84 5.03
822 1189 1.948138 CGCACATGCTCTCGCCTAG 60.948 63.158 1.82 0.00 39.32 3.02
824 1191 1.440893 CACATGCTCTCGCCTAGCT 59.559 57.895 0.00 0.00 40.73 3.32
825 1192 0.670706 CACATGCTCTCGCCTAGCTA 59.329 55.000 0.00 0.00 40.73 3.32
826 1193 1.271934 CACATGCTCTCGCCTAGCTAT 59.728 52.381 0.00 0.00 40.73 2.97
827 1194 1.543802 ACATGCTCTCGCCTAGCTATC 59.456 52.381 0.00 0.00 40.73 2.08
828 1195 0.808125 ATGCTCTCGCCTAGCTATCG 59.192 55.000 8.69 8.69 40.73 2.92
829 1196 1.154112 GCTCTCGCCTAGCTATCGC 60.154 63.158 9.80 6.75 37.01 4.58
830 1197 1.857318 GCTCTCGCCTAGCTATCGCA 61.857 60.000 12.09 2.01 39.10 5.10
901 1269 2.482490 CCTATAAAACTCCCGTGACCCG 60.482 54.545 0.00 0.00 0.00 5.28
948 1317 3.381949 GCTAGACACGAGACAAACACTT 58.618 45.455 0.00 0.00 0.00 3.16
951 1320 1.003866 GACACGAGACAAACACTTGCC 60.004 52.381 0.00 0.00 35.84 4.52
954 1323 1.299541 CGAGACAAACACTTGCCAGT 58.700 50.000 0.00 0.00 35.84 4.00
963 1333 1.625818 ACACTTGCCAGTAGCTAGCTT 59.374 47.619 24.88 1.98 46.85 3.74
967 1349 0.826715 TGCCAGTAGCTAGCTTGAGG 59.173 55.000 24.88 21.34 44.23 3.86
970 1352 2.103373 CCAGTAGCTAGCTTGAGGTCA 58.897 52.381 24.88 0.00 0.00 4.02
972 1354 1.746220 AGTAGCTAGCTTGAGGTCACG 59.254 52.381 24.88 0.00 0.00 4.35
974 1356 1.479709 AGCTAGCTTGAGGTCACGAT 58.520 50.000 12.68 0.00 0.00 3.73
977 1359 3.447586 AGCTAGCTTGAGGTCACGATTAA 59.552 43.478 12.68 0.00 0.00 1.40
978 1360 3.799420 GCTAGCTTGAGGTCACGATTAAG 59.201 47.826 7.70 0.00 0.00 1.85
979 1361 2.622436 AGCTTGAGGTCACGATTAAGC 58.378 47.619 0.00 0.00 40.44 3.09
981 1363 2.094417 GCTTGAGGTCACGATTAAGCAC 59.906 50.000 0.00 0.00 40.02 4.40
982 1364 1.990799 TGAGGTCACGATTAAGCACG 58.009 50.000 0.00 0.00 0.00 5.34
984 1366 0.108329 AGGTCACGATTAAGCACGGG 60.108 55.000 0.00 0.00 0.00 5.28
1189 1577 3.386237 ACGCCCTCTGGTGAGCTC 61.386 66.667 6.82 6.82 45.51 4.09
1190 1578 3.073735 CGCCCTCTGGTGAGCTCT 61.074 66.667 16.19 0.00 45.51 4.09
1191 1579 2.654079 CGCCCTCTGGTGAGCTCTT 61.654 63.158 16.19 0.00 45.51 2.85
1192 1580 1.220477 GCCCTCTGGTGAGCTCTTC 59.780 63.158 16.19 8.05 38.93 2.87
1193 1581 1.264045 GCCCTCTGGTGAGCTCTTCT 61.264 60.000 16.19 0.00 38.93 2.85
1194 1582 1.274712 CCCTCTGGTGAGCTCTTCTT 58.725 55.000 16.19 0.00 38.93 2.52
1239 1643 5.140872 GTGATATCTGTACGTGTGATCGAG 58.859 45.833 0.00 0.00 34.70 4.04
1240 1644 2.476873 ATCTGTACGTGTGATCGAGC 57.523 50.000 0.00 0.00 34.70 5.03
1255 1662 1.135315 GAGCCGAGCACGTAACGTA 59.865 57.895 2.18 0.00 38.32 3.57
1260 1667 1.609932 CGAGCACGTAACGTATGTGT 58.390 50.000 13.92 4.05 45.26 3.72
1261 1668 1.576246 CGAGCACGTAACGTATGTGTC 59.424 52.381 13.92 10.04 45.26 3.67
1262 1669 1.916000 GAGCACGTAACGTATGTGTCC 59.084 52.381 13.92 5.26 45.26 4.02
1382 1789 4.223125 AACAGCAGGGCCTTGGCA 62.223 61.111 17.71 0.00 0.00 4.92
1392 1799 1.986210 GCCTTGGCATGGGCTTTCT 60.986 57.895 19.82 0.00 44.48 2.52
1408 1815 2.011122 TTCTTCCTCCTCGACAAGGT 57.989 50.000 7.94 0.00 46.32 3.50
1409 1816 2.893215 TCTTCCTCCTCGACAAGGTA 57.107 50.000 7.94 0.00 46.32 3.08
1410 1817 2.444421 TCTTCCTCCTCGACAAGGTAC 58.556 52.381 7.94 0.00 46.32 3.34
1411 1818 2.168496 CTTCCTCCTCGACAAGGTACA 58.832 52.381 7.94 0.00 46.32 2.90
1412 1819 2.526888 TCCTCCTCGACAAGGTACAT 57.473 50.000 7.94 0.00 46.32 2.29
1413 1820 3.657398 TCCTCCTCGACAAGGTACATA 57.343 47.619 7.94 0.00 46.32 2.29
1414 1821 3.285484 TCCTCCTCGACAAGGTACATAC 58.715 50.000 7.94 0.00 46.32 2.39
1415 1822 3.053842 TCCTCCTCGACAAGGTACATACT 60.054 47.826 7.94 0.00 46.32 2.12
1416 1823 3.700038 CCTCCTCGACAAGGTACATACTT 59.300 47.826 0.00 0.00 46.32 2.24
1417 1824 4.159879 CCTCCTCGACAAGGTACATACTTT 59.840 45.833 0.00 0.00 46.32 2.66
1418 1825 5.337330 CCTCCTCGACAAGGTACATACTTTT 60.337 44.000 0.00 0.00 46.32 2.27
1419 1826 5.475719 TCCTCGACAAGGTACATACTTTTG 58.524 41.667 0.00 5.73 46.32 2.44
1420 1827 5.011329 TCCTCGACAAGGTACATACTTTTGT 59.989 40.000 10.28 10.28 46.32 2.83
1421 1828 5.699458 CCTCGACAAGGTACATACTTTTGTT 59.301 40.000 11.22 1.11 40.67 2.83
1422 1829 6.204108 CCTCGACAAGGTACATACTTTTGTTT 59.796 38.462 11.22 0.00 40.67 2.83
1423 1830 7.181143 TCGACAAGGTACATACTTTTGTTTC 57.819 36.000 11.22 3.35 35.64 2.78
1424 1831 6.762187 TCGACAAGGTACATACTTTTGTTTCA 59.238 34.615 11.22 0.00 35.64 2.69
1425 1832 7.280428 TCGACAAGGTACATACTTTTGTTTCAA 59.720 33.333 11.22 0.00 35.64 2.69
1426 1833 7.911205 CGACAAGGTACATACTTTTGTTTCAAA 59.089 33.333 11.22 0.00 35.64 2.69
1427 1834 9.575783 GACAAGGTACATACTTTTGTTTCAAAA 57.424 29.630 7.31 7.31 35.64 2.44
1428 1835 9.930693 ACAAGGTACATACTTTTGTTTCAAAAA 57.069 25.926 8.59 0.00 33.53 1.94
1515 1944 3.406764 GTTTCTTCTGCACAGTCTCCAT 58.593 45.455 0.00 0.00 0.00 3.41
1562 1992 3.433598 CCTCTGTCACTTTGGGTTTCAGA 60.434 47.826 0.00 0.00 35.45 3.27
1582 2012 6.227522 TCAGAAATATTTCAGACACAACCGA 58.772 36.000 26.02 7.16 39.61 4.69
1588 2018 5.964958 ATTTCAGACACAACCGAAATCAT 57.035 34.783 0.00 0.00 33.87 2.45
1646 2085 9.603921 AACATTCACTTGAGATTCAACAAAAAT 57.396 25.926 0.00 0.00 32.21 1.82
1647 2086 9.037737 ACATTCACTTGAGATTCAACAAAAATG 57.962 29.630 0.00 0.00 32.21 2.32
1679 2123 8.741101 TCGAAAAATATTTGAATTCCTGTGTG 57.259 30.769 0.39 0.00 0.00 3.82
1681 2125 7.116090 CGAAAAATATTTGAATTCCTGTGTGCA 59.884 33.333 0.39 0.00 0.00 4.57
1687 2131 4.933505 TGAATTCCTGTGTGCAAATGAA 57.066 36.364 2.27 0.00 0.00 2.57
1688 2132 5.471556 TGAATTCCTGTGTGCAAATGAAT 57.528 34.783 2.27 0.00 0.00 2.57
1689 2133 5.856156 TGAATTCCTGTGTGCAAATGAATT 58.144 33.333 2.27 10.17 33.74 2.17
1692 2136 5.471556 TTCCTGTGTGCAAATGAATTCAT 57.528 34.783 15.36 15.36 38.41 2.57
1754 2212 6.160684 TGCTGAAATCATTGAAATTGAGTGG 58.839 36.000 0.00 0.00 0.00 4.00
1793 2267 5.577835 TGAAAGTGAAAACTCATTTCCACG 58.422 37.500 0.00 0.00 45.67 4.94
1811 2299 0.793478 CGCACACTAGAGACCGTTCG 60.793 60.000 0.00 0.00 0.00 3.95
1812 2300 1.071567 GCACACTAGAGACCGTTCGC 61.072 60.000 0.00 0.00 0.00 4.70
1873 2369 3.617284 TGCATGAATTCTGATCAGCACT 58.383 40.909 18.36 0.00 31.04 4.40
1874 2370 3.626217 TGCATGAATTCTGATCAGCACTC 59.374 43.478 18.36 7.40 31.04 3.51
1875 2371 3.626217 GCATGAATTCTGATCAGCACTCA 59.374 43.478 18.36 13.43 0.00 3.41
1876 2372 4.496010 GCATGAATTCTGATCAGCACTCAC 60.496 45.833 18.36 7.51 0.00 3.51
1877 2373 4.548451 TGAATTCTGATCAGCACTCACT 57.452 40.909 18.36 0.00 0.00 3.41
1878 2374 4.502016 TGAATTCTGATCAGCACTCACTC 58.498 43.478 18.36 7.62 0.00 3.51
1879 2375 4.020839 TGAATTCTGATCAGCACTCACTCA 60.021 41.667 18.36 9.87 0.00 3.41
1880 2376 3.309961 TTCTGATCAGCACTCACTCAC 57.690 47.619 18.36 0.00 0.00 3.51
2000 2508 4.757149 ACAGTTTTCAGAGGCTATGAACAC 59.243 41.667 25.76 25.76 37.53 3.32
2002 2510 3.953712 TTTCAGAGGCTATGAACACGA 57.046 42.857 23.11 6.96 36.44 4.35
2121 2636 1.220749 GCCATCTACCAACGGCTCA 59.779 57.895 0.00 0.00 41.50 4.26
2122 2637 1.090052 GCCATCTACCAACGGCTCAC 61.090 60.000 0.00 0.00 41.50 3.51
2123 2638 0.462047 CCATCTACCAACGGCTCACC 60.462 60.000 0.00 0.00 0.00 4.02
2171 2686 2.513026 ATCAGACCAGGACAGTGCGC 62.513 60.000 0.00 0.00 0.00 6.09
2187 2702 3.499737 GCTGCGGTGCTGCGTTAT 61.500 61.111 4.93 0.00 42.83 1.89
2188 2703 3.039202 GCTGCGGTGCTGCGTTATT 62.039 57.895 4.93 0.00 42.83 1.40
2221 2736 2.409378 CACCGCTGTTTTTCATTCATGC 59.591 45.455 0.00 0.00 0.00 4.06
2236 2751 2.916640 TCATGCTTCCATCAATGCGTA 58.083 42.857 0.00 0.00 0.00 4.42
2237 2752 2.613595 TCATGCTTCCATCAATGCGTAC 59.386 45.455 0.00 0.00 0.00 3.67
2238 2753 1.006086 TGCTTCCATCAATGCGTACG 58.994 50.000 11.84 11.84 0.00 3.67
2239 2754 1.006832 GCTTCCATCAATGCGTACGT 58.993 50.000 17.90 0.00 0.00 3.57
2240 2755 2.198406 GCTTCCATCAATGCGTACGTA 58.802 47.619 17.90 13.65 0.00 3.57
2241 2756 2.800544 GCTTCCATCAATGCGTACGTAT 59.199 45.455 17.90 15.63 0.00 3.06
2266 2781 2.684374 GCCATCCCAAATCATTTTTGGC 59.316 45.455 10.86 7.16 45.70 4.52
2306 2822 1.266718 GCGCATTCAAGTTCCAAGTGA 59.733 47.619 0.30 0.00 0.00 3.41
2336 2852 3.472263 CATGCATGCATGTCCATCG 57.528 52.632 40.30 21.55 46.20 3.84
2337 2853 0.666374 CATGCATGCATGTCCATCGT 59.334 50.000 40.30 14.92 46.20 3.73
2338 2854 0.949397 ATGCATGCATGTCCATCGTC 59.051 50.000 31.74 8.94 35.03 4.20
2339 2855 1.096967 TGCATGCATGTCCATCGTCC 61.097 55.000 26.79 8.24 0.00 4.79
2340 2856 1.096967 GCATGCATGTCCATCGTCCA 61.097 55.000 26.79 0.00 0.00 4.02
2342 2858 1.064505 CATGCATGTCCATCGTCCAAC 59.935 52.381 18.91 0.00 0.00 3.77
2343 2859 0.324614 TGCATGTCCATCGTCCAACT 59.675 50.000 0.00 0.00 0.00 3.16
2344 2860 1.552792 TGCATGTCCATCGTCCAACTA 59.447 47.619 0.00 0.00 0.00 2.24
2345 2861 2.170397 TGCATGTCCATCGTCCAACTAT 59.830 45.455 0.00 0.00 0.00 2.12
2346 2862 2.545526 GCATGTCCATCGTCCAACTATG 59.454 50.000 0.00 0.00 0.00 2.23
2347 2863 3.797039 CATGTCCATCGTCCAACTATGT 58.203 45.455 0.00 0.00 0.00 2.29
2349 2865 2.565391 TGTCCATCGTCCAACTATGTGT 59.435 45.455 0.00 0.00 0.00 3.72
2350 2866 3.764972 TGTCCATCGTCCAACTATGTGTA 59.235 43.478 0.00 0.00 0.00 2.90
2351 2867 4.110482 GTCCATCGTCCAACTATGTGTAC 58.890 47.826 0.00 0.00 0.00 2.90
2352 2868 4.021229 TCCATCGTCCAACTATGTGTACT 58.979 43.478 0.00 0.00 0.00 2.73
2353 2869 4.097437 TCCATCGTCCAACTATGTGTACTC 59.903 45.833 0.00 0.00 0.00 2.59
2354 2870 4.098044 CCATCGTCCAACTATGTGTACTCT 59.902 45.833 0.00 0.00 0.00 3.24
2355 2871 5.298527 CCATCGTCCAACTATGTGTACTCTA 59.701 44.000 0.00 0.00 0.00 2.43
2356 2872 6.183360 CCATCGTCCAACTATGTGTACTCTAA 60.183 42.308 0.00 0.00 0.00 2.10
2357 2873 7.426410 CATCGTCCAACTATGTGTACTCTAAT 58.574 38.462 0.00 0.00 0.00 1.73
2405 2925 4.452114 GTGCCATGCATGTCGATAATCTTA 59.548 41.667 24.58 0.00 41.91 2.10
2517 3202 5.942872 CACTGTTTGTGGATAAATCAGTCC 58.057 41.667 0.00 0.00 42.68 3.85
2532 3217 3.779444 TCAGTCCAGTCTAGAACCATGT 58.221 45.455 0.00 0.00 0.00 3.21
2533 3218 3.764434 TCAGTCCAGTCTAGAACCATGTC 59.236 47.826 0.00 0.00 0.00 3.06
2536 3221 1.137086 CCAGTCTAGAACCATGTCCGG 59.863 57.143 0.00 0.00 0.00 5.14
2537 3222 1.137086 CAGTCTAGAACCATGTCCGGG 59.863 57.143 0.00 0.00 0.00 5.73
2538 3223 0.464452 GTCTAGAACCATGTCCGGGG 59.536 60.000 0.00 0.00 0.00 5.73
2539 3224 0.337082 TCTAGAACCATGTCCGGGGA 59.663 55.000 0.00 0.00 0.00 4.81
2540 3225 1.062428 TCTAGAACCATGTCCGGGGAT 60.062 52.381 0.00 0.00 0.00 3.85
2544 3229 0.183492 AACCATGTCCGGGGATGATG 59.817 55.000 13.48 4.25 0.00 3.07
2545 3230 1.601759 CCATGTCCGGGGATGATGC 60.602 63.158 13.48 0.00 0.00 3.91
2546 3231 1.962822 CATGTCCGGGGATGATGCG 60.963 63.158 0.00 0.00 0.00 4.73
2547 3232 3.182590 ATGTCCGGGGATGATGCGG 62.183 63.158 0.00 0.00 0.00 5.69
2548 3233 3.546543 GTCCGGGGATGATGCGGA 61.547 66.667 0.00 0.00 0.00 5.54
2549 3234 3.233980 TCCGGGGATGATGCGGAG 61.234 66.667 0.00 0.00 0.00 4.63
2640 3325 2.730550 GCAACCAGCTATGCAACTTT 57.269 45.000 12.06 0.00 42.12 2.66
2657 3342 9.672673 ATGCAACTTTAGTTATCAATAGTGTCT 57.327 29.630 0.00 0.00 36.32 3.41
2677 3554 9.498176 AGTGTCTAACATTTTAGTTTATCCGTT 57.502 29.630 0.00 0.00 36.75 4.44
2678 3555 9.537848 GTGTCTAACATTTTAGTTTATCCGTTG 57.462 33.333 0.00 0.00 36.75 4.10
2729 3608 3.565307 TGTCTTTTGTTGCTTCTCCCAT 58.435 40.909 0.00 0.00 0.00 4.00
2804 3685 3.625853 TGACACACTCAATTGTTTCCCA 58.374 40.909 5.13 0.00 0.00 4.37
2806 3687 4.464244 TGACACACTCAATTGTTTCCCAAA 59.536 37.500 5.13 0.00 36.44 3.28
2807 3688 5.047021 TGACACACTCAATTGTTTCCCAAAA 60.047 36.000 5.13 0.00 36.44 2.44
2897 3778 7.882271 AGCACTAGAACTCTTCTGATTTTTCAT 59.118 33.333 0.00 0.00 40.94 2.57
2941 3823 9.772973 ACACACAATTATTACTAACTTCTGTGA 57.227 29.630 5.46 0.00 36.14 3.58
2955 3840 1.203001 TCTGTGAAAAGGCCCCGAAAT 60.203 47.619 0.00 0.00 0.00 2.17
3031 3927 0.578683 CAATCCGCAGCACATAGTCG 59.421 55.000 0.00 0.00 0.00 4.18
3034 3930 0.099968 TCCGCAGCACATAGTCGTAC 59.900 55.000 0.00 0.00 0.00 3.67
3035 3931 0.179148 CCGCAGCACATAGTCGTACA 60.179 55.000 0.00 0.00 0.00 2.90
3101 4003 3.282021 GGTTTCTGAGATATGGCTTGCA 58.718 45.455 0.00 0.00 0.00 4.08
3117 4019 4.754114 GGCTTGCAACATTGACCATTTTTA 59.246 37.500 0.00 0.00 0.00 1.52
3163 4066 8.602424 TGTGATTATTCCAGGATATATTTCGGT 58.398 33.333 0.00 0.00 0.00 4.69
3164 4067 9.099454 GTGATTATTCCAGGATATATTTCGGTC 57.901 37.037 0.00 0.00 0.00 4.79
3174 4077 6.041296 AGGATATATTTCGGTCGGTTAACTGT 59.959 38.462 14.06 0.00 0.00 3.55
3176 4079 7.095899 GGATATATTTCGGTCGGTTAACTGTTC 60.096 40.741 14.06 8.65 0.00 3.18
3179 4082 2.472816 TCGGTCGGTTAACTGTTCAAC 58.527 47.619 14.06 5.03 0.00 3.18
3186 4089 5.006941 GTCGGTTAACTGTTCAACTTGCTAA 59.993 40.000 14.06 0.00 0.00 3.09
3225 4128 4.904895 AAAACACCTTACTACTCCCTCC 57.095 45.455 0.00 0.00 0.00 4.30
3226 4129 2.140839 ACACCTTACTACTCCCTCCG 57.859 55.000 0.00 0.00 0.00 4.63
3227 4130 1.357079 ACACCTTACTACTCCCTCCGT 59.643 52.381 0.00 0.00 0.00 4.69
3228 4131 2.022934 CACCTTACTACTCCCTCCGTC 58.977 57.143 0.00 0.00 0.00 4.79
3229 4132 1.064091 ACCTTACTACTCCCTCCGTCC 60.064 57.143 0.00 0.00 0.00 4.79
3230 4133 1.307097 CTTACTACTCCCTCCGTCCG 58.693 60.000 0.00 0.00 0.00 4.79
3231 4134 0.911769 TTACTACTCCCTCCGTCCGA 59.088 55.000 0.00 0.00 0.00 4.55
3232 4135 0.911769 TACTACTCCCTCCGTCCGAA 59.088 55.000 0.00 0.00 0.00 4.30
3233 4136 0.038744 ACTACTCCCTCCGTCCGAAA 59.961 55.000 0.00 0.00 0.00 3.46
3234 4137 1.180029 CTACTCCCTCCGTCCGAAAA 58.820 55.000 0.00 0.00 0.00 2.29
3235 4138 1.755380 CTACTCCCTCCGTCCGAAAAT 59.245 52.381 0.00 0.00 0.00 1.82
3236 4139 1.856629 ACTCCCTCCGTCCGAAAATA 58.143 50.000 0.00 0.00 0.00 1.40
3237 4140 1.479730 ACTCCCTCCGTCCGAAAATAC 59.520 52.381 0.00 0.00 0.00 1.89
3238 4141 1.755380 CTCCCTCCGTCCGAAAATACT 59.245 52.381 0.00 0.00 0.00 2.12
3239 4142 2.167900 CTCCCTCCGTCCGAAAATACTT 59.832 50.000 0.00 0.00 0.00 2.24
3240 4143 2.093869 TCCCTCCGTCCGAAAATACTTG 60.094 50.000 0.00 0.00 0.00 3.16
3241 4144 2.354403 CCCTCCGTCCGAAAATACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
3242 4145 2.928116 CCTCCGTCCGAAAATACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
3243 4146 3.581755 CTCCGTCCGAAAATACTTGTCA 58.418 45.455 0.00 0.00 0.00 3.58
3244 4147 4.181578 CTCCGTCCGAAAATACTTGTCAT 58.818 43.478 0.00 0.00 0.00 3.06
3245 4148 4.178540 TCCGTCCGAAAATACTTGTCATC 58.821 43.478 0.00 0.00 0.00 2.92
3246 4149 3.930229 CCGTCCGAAAATACTTGTCATCA 59.070 43.478 0.00 0.00 0.00 3.07
3247 4150 4.390603 CCGTCCGAAAATACTTGTCATCAA 59.609 41.667 0.00 0.00 0.00 2.57
3248 4151 5.106869 CCGTCCGAAAATACTTGTCATCAAA 60.107 40.000 0.00 0.00 32.87 2.69
3249 4152 6.367421 CGTCCGAAAATACTTGTCATCAAAA 58.633 36.000 0.00 0.00 32.87 2.44
3250 4153 7.021196 CGTCCGAAAATACTTGTCATCAAAAT 58.979 34.615 0.00 0.00 32.87 1.82
3251 4154 7.537306 CGTCCGAAAATACTTGTCATCAAAATT 59.463 33.333 0.00 0.00 32.87 1.82
3252 4155 8.638565 GTCCGAAAATACTTGTCATCAAAATTG 58.361 33.333 0.00 0.00 32.87 2.32
3253 4156 8.572185 TCCGAAAATACTTGTCATCAAAATTGA 58.428 29.630 0.00 0.00 42.14 2.57
3309 4212 8.078060 TGTCTAGATACATCCACTTTTGATCA 57.922 34.615 0.00 0.00 0.00 2.92
3310 4213 8.708378 TGTCTAGATACATCCACTTTTGATCAT 58.292 33.333 0.00 0.00 0.00 2.45
3311 4214 9.553064 GTCTAGATACATCCACTTTTGATCATT 57.447 33.333 0.00 0.00 0.00 2.57
3315 4218 9.246670 AGATACATCCACTTTTGATCATTTTGA 57.753 29.630 0.00 0.00 0.00 2.69
3317 4220 9.811995 ATACATCCACTTTTGATCATTTTGATG 57.188 29.630 0.00 7.45 37.20 3.07
3318 4221 7.898918 ACATCCACTTTTGATCATTTTGATGA 58.101 30.769 18.98 5.17 37.20 2.92
3319 4222 7.816031 ACATCCACTTTTGATCATTTTGATGAC 59.184 33.333 18.98 0.00 37.20 3.06
3320 4223 7.287512 TCCACTTTTGATCATTTTGATGACA 57.712 32.000 0.00 0.00 37.20 3.58
3321 4224 7.724287 TCCACTTTTGATCATTTTGATGACAA 58.276 30.769 0.00 0.00 37.20 3.18
3322 4225 7.868922 TCCACTTTTGATCATTTTGATGACAAG 59.131 33.333 0.00 0.00 37.20 3.16
3323 4226 7.654520 CCACTTTTGATCATTTTGATGACAAGT 59.345 33.333 0.00 3.63 40.07 3.16
3324 4227 9.681692 CACTTTTGATCATTTTGATGACAAGTA 57.318 29.630 7.75 0.00 38.37 2.24
3329 4232 9.859427 TTGATCATTTTGATGACAAGTATTTCC 57.141 29.630 0.00 0.00 37.20 3.13
3330 4233 8.183536 TGATCATTTTGATGACAAGTATTTCCG 58.816 33.333 0.00 0.00 37.20 4.30
3331 4234 6.851609 TCATTTTGATGACAAGTATTTCCGG 58.148 36.000 0.00 0.00 37.32 5.14
3332 4235 6.657117 TCATTTTGATGACAAGTATTTCCGGA 59.343 34.615 0.00 0.00 37.32 5.14
3333 4236 5.873179 TTTGATGACAAGTATTTCCGGAC 57.127 39.130 1.83 0.00 37.32 4.79
3334 4237 3.517602 TGATGACAAGTATTTCCGGACG 58.482 45.455 1.83 0.00 0.00 4.79
3335 4238 2.373540 TGACAAGTATTTCCGGACGG 57.626 50.000 1.83 3.96 0.00 4.79
3336 4239 1.894466 TGACAAGTATTTCCGGACGGA 59.106 47.619 1.83 9.76 43.52 4.69
3337 4240 2.094390 TGACAAGTATTTCCGGACGGAG 60.094 50.000 13.64 3.15 46.06 4.63
3338 4241 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
3339 4242 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
3340 4243 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
3341 4244 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
3342 4245 0.032813 TATTTCCGGACGGAGGGAGT 60.033 55.000 13.64 0.00 46.06 3.85
3343 4246 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.000 13.64 0.00 46.06 2.59
3344 4247 0.967380 TTTCCGGACGGAGGGAGTAC 60.967 60.000 13.64 0.00 46.06 2.73
3345 4248 1.856539 TTCCGGACGGAGGGAGTACT 61.857 60.000 13.64 0.00 46.06 2.73
3350 4253 4.972875 CGGAGGGAGTACTACCGT 57.027 61.111 18.87 11.70 39.08 4.83
3361 4264 3.905784 AGTACTACCGTGTTAACAGTGC 58.094 45.455 8.98 6.72 0.00 4.40
3367 4270 2.492484 ACCGTGTTAACAGTGCCAAAAA 59.508 40.909 8.98 0.00 0.00 1.94
3388 4291 9.214953 CAAAAAGCATTCATCGAGTTAATCTAC 57.785 33.333 0.00 0.00 0.00 2.59
3392 4295 5.986135 GCATTCATCGAGTTAATCTACTGGT 59.014 40.000 0.00 0.00 0.00 4.00
3436 4350 6.019801 CGTAAGATTAACTGTATGTGCCTGAC 60.020 42.308 0.00 0.00 43.02 3.51
3438 4352 3.945981 TTAACTGTATGTGCCTGACGA 57.054 42.857 0.00 0.00 0.00 4.20
3441 4355 0.109272 CTGTATGTGCCTGACGACGT 60.109 55.000 0.00 0.00 0.00 4.34
3442 4356 0.388006 TGTATGTGCCTGACGACGTG 60.388 55.000 4.58 0.00 0.00 4.49
3443 4357 1.445410 TATGTGCCTGACGACGTGC 60.445 57.895 4.58 3.07 0.00 5.34
3444 4358 2.829043 TATGTGCCTGACGACGTGCC 62.829 60.000 4.58 0.00 0.00 5.01
3445 4359 4.664677 GTGCCTGACGACGTGCCT 62.665 66.667 4.58 0.00 0.00 4.75
3446 4360 4.662961 TGCCTGACGACGTGCCTG 62.663 66.667 4.58 0.00 0.00 4.85
3448 4362 3.991051 CCTGACGACGTGCCTGGT 61.991 66.667 4.58 0.00 0.00 4.00
3449 4363 2.430921 CTGACGACGTGCCTGGTC 60.431 66.667 4.58 0.00 0.00 4.02
3787 4740 1.520342 GCTAGTGCTCTTGAGCCGG 60.520 63.158 18.48 0.00 36.03 6.13
3850 4835 3.480470 TCTTGGGCTTCTCTTCTGTTTG 58.520 45.455 0.00 0.00 0.00 2.93
3863 4848 7.168219 TCTCTTCTGTTTGGTTATGTTGCTAT 58.832 34.615 0.00 0.00 0.00 2.97
3884 4869 4.511617 TTAGTGTGAGAAGACTGCTCTG 57.488 45.455 11.91 0.00 33.57 3.35
3961 4953 7.255139 GCCCCAGAAAATATGTATTAGTGTGTC 60.255 40.741 0.00 0.00 0.00 3.67
4098 5098 7.431960 TCAAGCAATTGTTTAGCTAATTATGCG 59.568 33.333 7.08 3.71 37.70 4.73
4099 5099 5.687285 AGCAATTGTTTAGCTAATTATGCGC 59.313 36.000 7.08 0.00 36.73 6.09
4100 5100 5.386323 GCAATTGTTTAGCTAATTATGCGCG 60.386 40.000 7.08 0.00 35.28 6.86
4101 5101 4.868450 TTGTTTAGCTAATTATGCGCGT 57.132 36.364 8.43 7.55 35.28 6.01
4102 5102 4.190304 TGTTTAGCTAATTATGCGCGTG 57.810 40.909 13.61 0.00 35.28 5.34
4103 5103 2.941891 TTAGCTAATTATGCGCGTGC 57.058 45.000 15.48 15.48 43.20 5.34
4105 5105 1.299541 AGCTAATTATGCGCGTGCTT 58.700 45.000 23.16 18.43 43.34 3.91
4106 5106 1.003545 AGCTAATTATGCGCGTGCTTG 60.004 47.619 23.16 4.69 43.34 4.01
4107 5107 1.268032 GCTAATTATGCGCGTGCTTGT 60.268 47.619 23.16 10.64 43.34 3.16
4108 5108 2.791158 GCTAATTATGCGCGTGCTTGTT 60.791 45.455 23.16 16.21 43.34 2.83
4109 5109 2.346099 AATTATGCGCGTGCTTGTTT 57.654 40.000 23.16 10.78 43.34 2.83
4110 5110 3.479505 AATTATGCGCGTGCTTGTTTA 57.520 38.095 23.16 0.00 43.34 2.01
4111 5111 2.519002 TTATGCGCGTGCTTGTTTAG 57.481 45.000 23.16 0.00 43.34 1.85
4112 5112 1.715993 TATGCGCGTGCTTGTTTAGA 58.284 45.000 23.16 0.00 43.34 2.10
4113 5113 0.871722 ATGCGCGTGCTTGTTTAGAA 59.128 45.000 23.16 0.00 43.34 2.10
4114 5114 0.234625 TGCGCGTGCTTGTTTAGAAG 59.765 50.000 23.16 0.00 43.34 2.85
4115 5115 0.452784 GCGCGTGCTTGTTTAGAAGG 60.453 55.000 15.02 0.00 38.39 3.46
4116 5116 0.865769 CGCGTGCTTGTTTAGAAGGT 59.134 50.000 0.00 0.00 0.00 3.50
4117 5117 2.063266 CGCGTGCTTGTTTAGAAGGTA 58.937 47.619 0.00 0.00 0.00 3.08
4118 5118 2.092211 CGCGTGCTTGTTTAGAAGGTAG 59.908 50.000 0.00 0.00 0.00 3.18
4119 5119 3.323243 GCGTGCTTGTTTAGAAGGTAGA 58.677 45.455 0.00 0.00 0.00 2.59
4120 5120 3.744426 GCGTGCTTGTTTAGAAGGTAGAA 59.256 43.478 0.00 0.00 0.00 2.10
4121 5121 4.377124 GCGTGCTTGTTTAGAAGGTAGAAC 60.377 45.833 0.00 0.00 0.00 3.01
4122 5122 4.989168 CGTGCTTGTTTAGAAGGTAGAACT 59.011 41.667 0.00 0.00 0.00 3.01
4123 5123 6.154445 CGTGCTTGTTTAGAAGGTAGAACTA 58.846 40.000 0.00 0.00 0.00 2.24
4124 5124 6.643770 CGTGCTTGTTTAGAAGGTAGAACTAA 59.356 38.462 0.00 0.00 0.00 2.24
4125 5125 7.331193 CGTGCTTGTTTAGAAGGTAGAACTAAT 59.669 37.037 0.00 0.00 0.00 1.73
4126 5126 9.000486 GTGCTTGTTTAGAAGGTAGAACTAATT 58.000 33.333 0.00 0.00 0.00 1.40
4127 5127 9.569122 TGCTTGTTTAGAAGGTAGAACTAATTT 57.431 29.630 0.00 0.00 0.00 1.82
4161 5161 7.122353 TGAGGTAACAGAAGGTAGAACTATGAC 59.878 40.741 0.00 0.00 41.41 3.06
4187 5187 3.786495 GGTTCTGGACCCCCAAAAT 57.214 52.632 0.00 0.00 42.98 1.82
4188 5188 1.557099 GGTTCTGGACCCCCAAAATC 58.443 55.000 0.00 0.00 42.98 2.17
4189 5189 1.077169 GGTTCTGGACCCCCAAAATCT 59.923 52.381 0.00 0.00 42.98 2.40
4200 5200 3.633986 CCCCCAAAATCTGTTGAGCTATC 59.366 47.826 0.00 0.00 0.00 2.08
4230 5230 8.239314 AGCTGATTGTAATCATGTTAGTTGTTG 58.761 33.333 7.67 0.00 43.87 3.33
4231 5231 8.236586 GCTGATTGTAATCATGTTAGTTGTTGA 58.763 33.333 7.67 0.00 43.87 3.18
4232 5232 9.764870 CTGATTGTAATCATGTTAGTTGTTGAG 57.235 33.333 7.67 0.00 43.87 3.02
4235 5235 8.684386 TTGTAATCATGTTAGTTGTTGAGGAA 57.316 30.769 0.00 0.00 0.00 3.36
4261 5264 5.989777 AGTACAAGTGTTCTACTCGCAAAAT 59.010 36.000 0.00 0.00 39.18 1.82
4264 5267 7.435068 ACAAGTGTTCTACTCGCAAAATAAT 57.565 32.000 0.00 0.00 39.18 1.28
4298 5303 7.962995 ACCTCTTCTCTGTTGATACTATGAA 57.037 36.000 0.00 0.00 0.00 2.57
4309 5314 4.635223 TGATACTATGAACAGCAGCCATC 58.365 43.478 0.00 0.00 0.00 3.51
4350 5355 0.599728 GCGAAATTGTTGCCCTGCAA 60.600 50.000 0.00 0.00 46.80 4.08
4379 5384 0.106918 AGGCCCTGTTTCGAACACAA 60.107 50.000 0.00 0.00 36.25 3.33
4386 5391 4.154195 CCCTGTTTCGAACACAAGAATAGG 59.846 45.833 0.00 0.00 36.25 2.57
4431 5437 2.783135 TCCCTGCAAAACTGTCTCATC 58.217 47.619 0.00 0.00 0.00 2.92
4432 5438 2.106338 TCCCTGCAAAACTGTCTCATCA 59.894 45.455 0.00 0.00 0.00 3.07
4448 5455 7.262048 TGTCTCATCACGCAATAAACATACTA 58.738 34.615 0.00 0.00 0.00 1.82
4459 5466 8.394877 CGCAATAAACATACTAATTCCAGTGAA 58.605 33.333 0.00 0.00 34.33 3.18
4483 5666 1.274728 CACTCAGTTCTCCTGGACTGG 59.725 57.143 12.50 7.29 41.83 4.00
4495 5678 1.815003 CTGGACTGGTTTTGATCAGGC 59.185 52.381 0.00 0.00 38.26 4.85
4511 5694 0.994247 AGGCATCATCCAACAGTCCA 59.006 50.000 0.00 0.00 0.00 4.02
4512 5695 1.355381 AGGCATCATCCAACAGTCCAA 59.645 47.619 0.00 0.00 0.00 3.53
4513 5696 1.474077 GGCATCATCCAACAGTCCAAC 59.526 52.381 0.00 0.00 0.00 3.77
4514 5697 2.161855 GCATCATCCAACAGTCCAACA 58.838 47.619 0.00 0.00 0.00 3.33
4515 5698 2.095059 GCATCATCCAACAGTCCAACAC 60.095 50.000 0.00 0.00 0.00 3.32
4516 5699 3.415212 CATCATCCAACAGTCCAACACT 58.585 45.455 0.00 0.00 34.67 3.55
4526 5709 2.930040 CAGTCCAACACTGCTTATACGG 59.070 50.000 0.00 0.00 46.30 4.02
4527 5710 1.664151 GTCCAACACTGCTTATACGGC 59.336 52.381 0.00 0.00 0.00 5.68
4528 5711 1.014352 CCAACACTGCTTATACGGCC 58.986 55.000 0.00 0.00 0.00 6.13
4530 5713 0.533491 AACACTGCTTATACGGCCGA 59.467 50.000 35.90 16.57 0.00 5.54
4616 6037 4.799564 TCAGCCTTTGTTGTCAAAAAGT 57.200 36.364 14.03 1.58 42.02 2.66
4620 6043 4.929211 AGCCTTTGTTGTCAAAAAGTGTTC 59.071 37.500 14.03 5.84 42.02 3.18
4638 6061 7.526142 AGTGTTCGGTATCTATACATGACAT 57.474 36.000 0.00 0.00 34.98 3.06
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 4.479993 CTGCCAAGAGGAGCGGGG 62.480 72.222 0.00 0.00 36.89 5.73
22 23 1.139734 CGACATCGGCACTAGCACT 59.860 57.895 0.00 0.00 44.61 4.40
33 34 1.121240 GCTCGACAATACCGACATCG 58.879 55.000 0.00 0.00 39.44 3.84
35 36 1.112113 AGGCTCGACAATACCGACAT 58.888 50.000 0.00 0.00 32.18 3.06
38 39 0.172578 CACAGGCTCGACAATACCGA 59.827 55.000 0.00 0.00 34.61 4.69
39 40 0.806102 CCACAGGCTCGACAATACCG 60.806 60.000 0.00 0.00 0.00 4.02
42 43 4.932789 GCCACAGGCTCGACAATA 57.067 55.556 0.00 0.00 46.69 1.90
54 55 4.641645 CAAGGAGCCACGGCCACA 62.642 66.667 2.24 0.00 43.17 4.17
61 62 3.377656 TCCGACTCAAGGAGCCAC 58.622 61.111 0.00 0.00 32.04 5.01
134 135 0.752658 TCTGTATGGCCGACAGATGG 59.247 55.000 27.95 10.96 46.49 3.51
138 139 2.623416 TGTAGATCTGTATGGCCGACAG 59.377 50.000 24.95 24.95 44.75 3.51
139 140 2.361119 GTGTAGATCTGTATGGCCGACA 59.639 50.000 5.18 9.75 0.00 4.35
141 142 1.961394 GGTGTAGATCTGTATGGCCGA 59.039 52.381 5.18 0.00 0.00 5.54
142 143 1.000955 GGGTGTAGATCTGTATGGCCG 59.999 57.143 5.18 0.00 0.00 6.13
143 144 1.000955 CGGGTGTAGATCTGTATGGCC 59.999 57.143 5.18 0.00 0.00 5.36
144 145 1.687123 ACGGGTGTAGATCTGTATGGC 59.313 52.381 5.18 0.00 0.00 4.40
145 146 3.717707 CAACGGGTGTAGATCTGTATGG 58.282 50.000 5.18 0.00 0.00 2.74
149 150 0.249398 GGCAACGGGTGTAGATCTGT 59.751 55.000 5.18 0.00 0.00 3.41
178 179 0.034059 ACCAGCTCGTCCTTCAAGTG 59.966 55.000 0.00 0.00 0.00 3.16
182 183 1.289066 CGAACCAGCTCGTCCTTCA 59.711 57.895 0.00 0.00 34.08 3.02
183 184 2.095252 GCGAACCAGCTCGTCCTTC 61.095 63.158 0.00 0.00 40.99 3.46
198 199 0.673333 AATGACGGATGTTGCTGCGA 60.673 50.000 0.00 0.00 33.81 5.10
201 202 1.742761 AGGAATGACGGATGTTGCTG 58.257 50.000 0.00 0.00 0.00 4.41
202 203 2.086869 CAAGGAATGACGGATGTTGCT 58.913 47.619 0.00 0.00 0.00 3.91
213 214 1.375396 CGCCGTGGTCAAGGAATGA 60.375 57.895 7.11 0.00 35.05 2.57
215 216 2.046314 CCGCCGTGGTCAAGGAAT 60.046 61.111 7.11 0.00 31.21 3.01
232 233 3.050275 GTTGCGGGTGCCTGTCTC 61.050 66.667 0.00 0.00 41.78 3.36
257 258 1.087771 GCATGCCTTGCCATTTCTGC 61.088 55.000 6.36 0.00 46.15 4.26
269 270 2.964310 AAGGCTGAGTCGCATGCCT 61.964 57.895 13.15 3.77 46.34 4.75
271 272 1.703438 CTCAAGGCTGAGTCGCATGC 61.703 60.000 7.91 7.91 43.64 4.06
296 297 3.997064 CTCCTTGGTGAGCCGCTCG 62.997 68.421 15.58 0.78 37.67 5.03
329 330 2.113986 AGGCACTCCGCTTTTGCT 59.886 55.556 0.00 0.00 44.80 3.91
342 343 3.720601 ATGCTCCTTGGCGAGGCA 61.721 61.111 16.55 11.81 45.87 4.75
348 349 0.179119 GCACATTCATGCTCCTTGGC 60.179 55.000 0.00 0.00 42.62 4.52
361 362 0.107017 ATGCTTCTAGGCGGCACATT 60.107 50.000 13.08 0.00 38.83 2.71
362 363 0.533755 GATGCTTCTAGGCGGCACAT 60.534 55.000 13.08 4.55 38.83 3.21
373 374 1.531149 CACGACAAAACGGATGCTTCT 59.469 47.619 0.00 0.00 37.61 2.85
375 376 0.040425 GCACGACAAAACGGATGCTT 60.040 50.000 0.00 0.00 34.24 3.91
384 385 1.353804 GAAGCCGTGCACGACAAAA 59.646 52.632 39.10 0.00 43.02 2.44
385 386 2.876879 CGAAGCCGTGCACGACAAA 61.877 57.895 39.10 0.00 43.02 2.83
403 404 2.135933 CTCAACCGTGAAAGAGGTGAC 58.864 52.381 0.00 0.00 41.21 3.67
407 408 0.955919 GCCCTCAACCGTGAAAGAGG 60.956 60.000 0.00 0.00 45.68 3.69
411 412 2.114411 GGGCCCTCAACCGTGAAA 59.886 61.111 17.04 0.00 31.88 2.69
412 413 3.961414 GGGGCCCTCAACCGTGAA 61.961 66.667 24.38 0.00 31.88 3.18
433 434 1.131315 GAAAGGGCATCGCTTGAAGTC 59.869 52.381 0.00 0.00 36.76 3.01
443 444 3.891049 ACATGTAGGAAGAAAGGGCATC 58.109 45.455 0.00 0.00 0.00 3.91
451 452 7.284074 TCCAAACAAACTACATGTAGGAAGAA 58.716 34.615 31.20 9.33 37.49 2.52
471 472 0.039035 AATGCCCTTACCGCTCCAAA 59.961 50.000 0.00 0.00 0.00 3.28
478 479 1.937899 CGGTTAGAAATGCCCTTACCG 59.062 52.381 6.37 6.37 45.87 4.02
484 485 1.143073 AGGGATCGGTTAGAAATGCCC 59.857 52.381 0.00 0.00 31.74 5.36
488 489 8.847196 GCTTTTTATAAGGGATCGGTTAGAAAT 58.153 33.333 6.41 0.00 0.00 2.17
491 492 7.133133 AGCTTTTTATAAGGGATCGGTTAGA 57.867 36.000 0.00 0.00 0.00 2.10
492 493 8.897872 TTAGCTTTTTATAAGGGATCGGTTAG 57.102 34.615 0.00 0.00 0.00 2.34
493 494 9.683870 TTTTAGCTTTTTATAAGGGATCGGTTA 57.316 29.630 0.00 0.00 0.00 2.85
494 495 8.584063 TTTTAGCTTTTTATAAGGGATCGGTT 57.416 30.769 0.00 0.00 0.00 4.44
496 497 7.649057 CCTTTTAGCTTTTTATAAGGGATCGG 58.351 38.462 0.00 0.00 31.78 4.18
498 499 8.007405 TGCCTTTTAGCTTTTTATAAGGGATC 57.993 34.615 0.00 0.00 34.33 3.36
499 500 7.619698 ACTGCCTTTTAGCTTTTTATAAGGGAT 59.380 33.333 0.00 0.00 33.83 3.85
501 502 7.170393 ACTGCCTTTTAGCTTTTTATAAGGG 57.830 36.000 0.00 0.00 34.33 3.95
510 511 8.956533 TCAAATTTTTACTGCCTTTTAGCTTT 57.043 26.923 0.00 0.00 0.00 3.51
511 512 9.559732 AATCAAATTTTTACTGCCTTTTAGCTT 57.440 25.926 0.00 0.00 0.00 3.74
519 520 8.914011 GGGAGTATAATCAAATTTTTACTGCCT 58.086 33.333 15.67 1.18 40.71 4.75
520 521 8.914011 AGGGAGTATAATCAAATTTTTACTGCC 58.086 33.333 15.37 15.37 42.22 4.85
552 553 1.439353 ATCGGCTAGGTGCAATTGCG 61.439 55.000 24.58 11.53 45.83 4.85
563 615 1.070445 CAAGGCTGGGATCGGCTAG 59.930 63.158 0.00 0.00 44.44 3.42
564 616 1.686325 GACAAGGCTGGGATCGGCTA 61.686 60.000 0.00 0.00 44.44 3.93
565 617 3.011517 ACAAGGCTGGGATCGGCT 61.012 61.111 0.00 0.00 44.44 5.52
566 618 2.514824 GACAAGGCTGGGATCGGC 60.515 66.667 0.00 0.00 44.31 5.54
567 619 1.048724 TAGGACAAGGCTGGGATCGG 61.049 60.000 0.00 0.00 0.00 4.18
568 620 0.830648 TTAGGACAAGGCTGGGATCG 59.169 55.000 0.00 0.00 0.00 3.69
569 621 3.282885 CTTTTAGGACAAGGCTGGGATC 58.717 50.000 0.00 0.00 0.00 3.36
649 1011 2.722201 AAGGCTCGGATGGGTCGTC 61.722 63.158 0.00 0.00 0.00 4.20
652 1014 1.153349 GACAAGGCTCGGATGGGTC 60.153 63.158 0.00 0.00 0.00 4.46
653 1015 1.613630 AGACAAGGCTCGGATGGGT 60.614 57.895 0.00 0.00 0.00 4.51
665 1027 1.670811 ACAGGCAAAACGACAGACAAG 59.329 47.619 0.00 0.00 0.00 3.16
673 1035 1.144969 GTGATCGACAGGCAAAACGA 58.855 50.000 0.00 0.00 39.01 3.85
677 1039 0.601057 TCGAGTGATCGACAGGCAAA 59.399 50.000 0.00 0.00 37.20 3.68
680 1042 3.171705 GATCGAGTGATCGACAGGC 57.828 57.895 2.00 0.00 45.30 4.85
687 1049 0.876342 GCCCAACCGATCGAGTGATC 60.876 60.000 18.66 5.39 46.24 2.92
688 1050 1.144057 GCCCAACCGATCGAGTGAT 59.856 57.895 18.66 0.00 37.60 3.06
689 1051 2.577059 GCCCAACCGATCGAGTGA 59.423 61.111 18.66 0.00 0.00 3.41
690 1052 2.885644 CGCCCAACCGATCGAGTG 60.886 66.667 18.66 13.52 0.00 3.51
691 1053 4.143333 CCGCCCAACCGATCGAGT 62.143 66.667 18.66 10.13 0.00 4.18
692 1054 4.143333 ACCGCCCAACCGATCGAG 62.143 66.667 18.66 9.42 0.00 4.04
693 1055 4.137872 GACCGCCCAACCGATCGA 62.138 66.667 18.66 0.00 0.00 3.59
694 1056 4.444838 TGACCGCCCAACCGATCG 62.445 66.667 8.51 8.51 0.00 3.69
695 1057 2.511600 CTGACCGCCCAACCGATC 60.512 66.667 0.00 0.00 0.00 3.69
696 1058 3.000819 TCTGACCGCCCAACCGAT 61.001 61.111 0.00 0.00 0.00 4.18
697 1059 3.691342 CTCTGACCGCCCAACCGA 61.691 66.667 0.00 0.00 0.00 4.69
698 1060 3.234630 TTCTCTGACCGCCCAACCG 62.235 63.158 0.00 0.00 0.00 4.44
699 1061 1.376037 CTTCTCTGACCGCCCAACC 60.376 63.158 0.00 0.00 0.00 3.77
700 1062 0.250338 AACTTCTCTGACCGCCCAAC 60.250 55.000 0.00 0.00 0.00 3.77
713 1075 1.566018 GCACTGCGCGGTTAACTTCT 61.566 55.000 21.75 0.00 0.00 2.85
714 1076 1.154469 GCACTGCGCGGTTAACTTC 60.154 57.895 21.75 0.94 0.00 3.01
715 1077 1.234615 ATGCACTGCGCGGTTAACTT 61.235 50.000 21.75 7.72 46.97 2.66
716 1078 1.234615 AATGCACTGCGCGGTTAACT 61.235 50.000 21.75 1.61 46.97 2.24
723 1085 1.514014 GGGTTTAATGCACTGCGCG 60.514 57.895 0.00 0.00 46.97 6.86
724 1086 0.732538 GTGGGTTTAATGCACTGCGC 60.733 55.000 0.00 0.00 42.89 6.09
764 1126 2.202756 GTGGTCGATCGTGGAGGC 60.203 66.667 15.94 0.00 0.00 4.70
767 1129 2.872557 GACGTGGTCGATCGTGGA 59.127 61.111 15.94 0.00 40.39 4.02
824 1191 1.319541 GCTCTAGGGAGTGTGCGATA 58.680 55.000 0.00 0.00 41.38 2.92
825 1192 0.684479 TGCTCTAGGGAGTGTGCGAT 60.684 55.000 0.00 0.00 41.38 4.58
826 1193 1.304134 TGCTCTAGGGAGTGTGCGA 60.304 57.895 0.00 0.00 41.38 5.10
827 1194 1.140589 CTGCTCTAGGGAGTGTGCG 59.859 63.158 0.00 0.00 41.38 5.34
828 1195 0.174617 GTCTGCTCTAGGGAGTGTGC 59.825 60.000 0.00 0.00 41.38 4.57
829 1196 0.453793 CGTCTGCTCTAGGGAGTGTG 59.546 60.000 0.00 0.00 41.38 3.82
830 1197 1.316706 GCGTCTGCTCTAGGGAGTGT 61.317 60.000 0.00 0.00 41.38 3.55
948 1317 0.826715 CCTCAAGCTAGCTACTGGCA 59.173 55.000 19.70 0.00 40.47 4.92
951 1320 2.478709 CGTGACCTCAAGCTAGCTACTG 60.479 54.545 19.70 14.05 0.00 2.74
954 1323 2.124277 TCGTGACCTCAAGCTAGCTA 57.876 50.000 19.70 1.64 0.00 3.32
963 1333 1.403647 CCGTGCTTAATCGTGACCTCA 60.404 52.381 0.00 0.00 0.00 3.86
967 1349 1.713830 GCCCGTGCTTAATCGTGAC 59.286 57.895 0.00 0.00 33.53 3.67
978 1360 3.365265 CTCAACCCAAGCCCGTGC 61.365 66.667 0.00 0.00 37.95 5.34
979 1361 3.365265 GCTCAACCCAAGCCCGTG 61.365 66.667 0.00 0.00 33.53 4.94
984 1366 3.127533 ATCGCGCTCAACCCAAGC 61.128 61.111 5.56 0.00 36.38 4.01
986 1368 2.745884 CCATCGCGCTCAACCCAA 60.746 61.111 5.56 0.00 0.00 4.12
987 1369 3.700970 TCCATCGCGCTCAACCCA 61.701 61.111 5.56 0.00 0.00 4.51
1199 1587 2.277756 CGGTCGTACGTGCTAGCC 60.278 66.667 16.05 2.49 0.00 3.93
1223 1627 0.861866 CGGCTCGATCACACGTACAG 60.862 60.000 0.00 0.00 34.70 2.74
1239 1643 0.799534 ACATACGTTACGTGCTCGGC 60.800 55.000 21.22 1.73 41.39 5.54
1240 1644 0.911856 CACATACGTTACGTGCTCGG 59.088 55.000 21.22 7.49 41.39 4.63
1255 1662 2.034687 GCACCCTGCAGGACACAT 59.965 61.111 34.91 10.82 44.26 3.21
1382 1789 0.543749 CGAGGAGGAAGAAAGCCCAT 59.456 55.000 0.00 0.00 0.00 4.00
1428 1835 9.516314 GCAGTATGTACTTTGTCTTTTCTTTTT 57.484 29.630 0.00 0.00 39.31 1.94
1429 1836 8.682710 TGCAGTATGTACTTTGTCTTTTCTTTT 58.317 29.630 0.00 0.00 39.31 2.27
1430 1837 8.220755 TGCAGTATGTACTTTGTCTTTTCTTT 57.779 30.769 0.00 0.00 39.31 2.52
1431 1838 7.801716 TGCAGTATGTACTTTGTCTTTTCTT 57.198 32.000 0.00 0.00 39.31 2.52
1493 1922 2.147150 GGAGACTGTGCAGAAGAAACC 58.853 52.381 6.17 0.60 0.00 3.27
1515 1944 0.320374 GCCGATCATGGATACCGGAA 59.680 55.000 9.46 0.00 42.49 4.30
1562 1992 7.881142 TGATTTCGGTTGTGTCTGAAATATTT 58.119 30.769 0.00 0.00 46.69 1.40
1582 2012 9.350357 CTGAAAATCACTGAATTTCGATGATTT 57.650 29.630 22.56 22.56 46.68 2.17
1588 2018 7.431960 CACAAACTGAAAATCACTGAATTTCGA 59.568 33.333 12.79 4.34 35.08 3.71
1704 2148 6.094464 AGCGCTAAAATATTTACCTTTCGGTT 59.906 34.615 8.99 0.00 42.13 4.44
1729 2187 6.647481 CCACTCAATTTCAATGATTTCAGCAA 59.353 34.615 0.00 0.00 0.00 3.91
1793 2267 1.071567 GCGAACGGTCTCTAGTGTGC 61.072 60.000 0.00 0.00 0.00 4.57
1873 2369 4.074627 TGTTTAATTCACCGGTGAGTGA 57.925 40.909 34.25 24.19 44.89 3.41
1874 2370 4.513692 TCTTGTTTAATTCACCGGTGAGTG 59.486 41.667 34.25 18.87 41.13 3.51
1875 2371 4.710324 TCTTGTTTAATTCACCGGTGAGT 58.290 39.130 34.25 29.98 41.13 3.41
1876 2372 5.880054 ATCTTGTTTAATTCACCGGTGAG 57.120 39.130 34.25 20.61 41.13 3.51
1877 2373 5.878116 CCTATCTTGTTTAATTCACCGGTGA 59.122 40.000 33.23 33.23 37.91 4.02
1878 2374 5.448632 GCCTATCTTGTTTAATTCACCGGTG 60.449 44.000 29.26 29.26 0.00 4.94
1879 2375 4.638865 GCCTATCTTGTTTAATTCACCGGT 59.361 41.667 0.00 0.00 0.00 5.28
1880 2376 4.638421 TGCCTATCTTGTTTAATTCACCGG 59.362 41.667 0.00 0.00 0.00 5.28
1910 2406 1.647629 GGCGATCAATGAGCTGCAG 59.352 57.895 10.11 10.11 0.00 4.41
1911 2407 1.820906 GGGCGATCAATGAGCTGCA 60.821 57.895 14.61 0.00 0.00 4.41
1944 2440 1.950909 TCGCGGAATTGAAGGTTGTTT 59.049 42.857 6.13 0.00 0.00 2.83
2024 2532 1.035932 ACGACGGGACCGATCAAGAT 61.036 55.000 18.80 0.00 42.83 2.40
2074 2589 0.179034 GGCGAGAATGGAAGATGCCT 60.179 55.000 0.00 0.00 38.00 4.75
2075 2590 1.502163 CGGCGAGAATGGAAGATGCC 61.502 60.000 0.00 0.00 37.66 4.40
2081 2596 1.079405 GGTGACGGCGAGAATGGAA 60.079 57.895 16.62 0.00 0.00 3.53
2171 2686 0.794229 CAAATAACGCAGCACCGCAG 60.794 55.000 0.00 0.00 0.00 5.18
2176 2691 1.715519 CTGCAACAAATAACGCAGCAC 59.284 47.619 0.00 0.00 44.69 4.40
2221 2736 4.621460 CCTATACGTACGCATTGATGGAAG 59.379 45.833 16.72 0.11 0.00 3.46
2336 2852 9.601217 AATCAATTAGAGTACACATAGTTGGAC 57.399 33.333 0.00 0.00 0.00 4.02
2468 3153 3.064207 AGAAAGAGACAATAAACGCGCA 58.936 40.909 5.73 0.00 0.00 6.09
2472 3157 8.428536 CAGTGTTCTAGAAAGAGACAATAAACG 58.571 37.037 6.78 0.00 31.96 3.60
2515 3200 2.100197 CGGACATGGTTCTAGACTGGA 58.900 52.381 0.00 0.00 0.00 3.86
2517 3202 1.137086 CCCGGACATGGTTCTAGACTG 59.863 57.143 0.73 0.00 0.00 3.51
2533 3218 4.996434 GCTCCGCATCATCCCCGG 62.996 72.222 0.00 0.00 43.21 5.73
2544 3229 5.239525 AGAAACAATAAATAGGATGCTCCGC 59.760 40.000 0.00 0.00 42.75 5.54
2545 3230 6.867662 AGAAACAATAAATAGGATGCTCCG 57.132 37.500 0.00 0.00 42.75 4.63
2546 3231 8.907885 AGAAAGAAACAATAAATAGGATGCTCC 58.092 33.333 0.00 0.00 36.58 4.70
2695 3574 9.686683 AGCAACAAAAGACAATTCTAGGTATAT 57.313 29.630 0.00 0.00 0.00 0.86
2716 3595 9.489084 AAATTAGTTTTAAATGGGAGAAGCAAC 57.511 29.630 0.00 0.00 0.00 4.17
2807 3688 9.744468 GTAACATCCTACAAAGTTGTGAATTTT 57.256 29.630 6.94 1.08 42.31 1.82
2897 3778 3.508402 TGTGTTTGCGTCTACTCCTATCA 59.492 43.478 0.00 0.00 0.00 2.15
2941 3823 0.973632 GGTTGATTTCGGGGCCTTTT 59.026 50.000 0.84 0.00 0.00 2.27
2942 3824 0.114364 AGGTTGATTTCGGGGCCTTT 59.886 50.000 0.84 0.00 0.00 3.11
2945 3827 0.465642 CCTAGGTTGATTTCGGGGCC 60.466 60.000 0.00 0.00 0.00 5.80
2955 3840 4.606210 TCTACTGTGTATGCCTAGGTTGA 58.394 43.478 11.31 0.00 0.00 3.18
3031 3927 0.035725 GCTAACCCACCCACCTGTAC 60.036 60.000 0.00 0.00 0.00 2.90
3034 3930 1.299976 GAGCTAACCCACCCACCTG 59.700 63.158 0.00 0.00 0.00 4.00
3035 3931 1.151899 TGAGCTAACCCACCCACCT 60.152 57.895 0.00 0.00 0.00 4.00
3117 4019 8.798859 ATCACAGCTGACTCTTAAATTTGTAT 57.201 30.769 23.35 0.00 0.00 2.29
3163 4066 3.537580 AGCAAGTTGAACAGTTAACCGA 58.462 40.909 7.16 0.00 0.00 4.69
3164 4067 3.963383 AGCAAGTTGAACAGTTAACCG 57.037 42.857 7.16 0.00 0.00 4.44
3208 4111 2.022934 GACGGAGGGAGTAGTAAGGTG 58.977 57.143 0.00 0.00 0.00 4.00
3220 4123 2.277084 CAAGTATTTTCGGACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
3221 4124 2.928116 GACAAGTATTTTCGGACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
3222 4125 3.581755 TGACAAGTATTTTCGGACGGAG 58.418 45.455 0.00 0.00 0.00 4.63
3223 4126 3.663995 TGACAAGTATTTTCGGACGGA 57.336 42.857 0.00 0.00 0.00 4.69
3224 4127 3.930229 TGATGACAAGTATTTTCGGACGG 59.070 43.478 0.00 0.00 0.00 4.79
3225 4128 5.524511 TTGATGACAAGTATTTTCGGACG 57.475 39.130 0.00 0.00 0.00 4.79
3226 4129 8.638565 CAATTTTGATGACAAGTATTTTCGGAC 58.361 33.333 0.00 0.00 37.32 4.79
3227 4130 8.572185 TCAATTTTGATGACAAGTATTTTCGGA 58.428 29.630 0.00 0.00 37.32 4.55
3228 4131 8.741101 TCAATTTTGATGACAAGTATTTTCGG 57.259 30.769 0.00 0.00 37.32 4.30
3283 4186 8.708378 TGATCAAAAGTGGATGTATCTAGACAT 58.292 33.333 0.00 0.00 42.82 3.06
3284 4187 8.078060 TGATCAAAAGTGGATGTATCTAGACA 57.922 34.615 0.00 0.00 0.00 3.41
3285 4188 9.553064 AATGATCAAAAGTGGATGTATCTAGAC 57.447 33.333 0.00 0.00 0.00 2.59
3289 4192 9.246670 TCAAAATGATCAAAAGTGGATGTATCT 57.753 29.630 0.00 0.00 0.00 1.98
3291 4194 9.811995 CATCAAAATGATCAAAAGTGGATGTAT 57.188 29.630 0.00 0.00 34.28 2.29
3292 4195 9.022884 TCATCAAAATGATCAAAAGTGGATGTA 57.977 29.630 17.40 8.21 36.98 2.29
3293 4196 7.816031 GTCATCAAAATGATCAAAAGTGGATGT 59.184 33.333 17.40 0.00 43.62 3.06
3294 4197 7.815549 TGTCATCAAAATGATCAAAAGTGGATG 59.184 33.333 0.00 8.95 43.62 3.51
3295 4198 7.898918 TGTCATCAAAATGATCAAAAGTGGAT 58.101 30.769 0.00 0.00 43.62 3.41
3296 4199 7.287512 TGTCATCAAAATGATCAAAAGTGGA 57.712 32.000 0.00 0.00 43.62 4.02
3297 4200 7.654520 ACTTGTCATCAAAATGATCAAAAGTGG 59.345 33.333 0.00 0.00 43.62 4.00
3298 4201 8.583810 ACTTGTCATCAAAATGATCAAAAGTG 57.416 30.769 0.00 0.00 43.62 3.16
3303 4206 9.859427 GGAAATACTTGTCATCAAAATGATCAA 57.141 29.630 0.00 0.00 43.62 2.57
3304 4207 8.183536 CGGAAATACTTGTCATCAAAATGATCA 58.816 33.333 0.00 0.00 43.62 2.92
3305 4208 7.645340 CCGGAAATACTTGTCATCAAAATGATC 59.355 37.037 0.00 0.00 43.62 2.92
3306 4209 7.339212 TCCGGAAATACTTGTCATCAAAATGAT 59.661 33.333 0.00 0.00 43.62 2.45
3307 4210 6.657117 TCCGGAAATACTTGTCATCAAAATGA 59.343 34.615 0.00 0.00 39.63 2.57
3308 4211 6.747280 GTCCGGAAATACTTGTCATCAAAATG 59.253 38.462 5.23 0.00 32.87 2.32
3309 4212 6.403200 CGTCCGGAAATACTTGTCATCAAAAT 60.403 38.462 5.23 0.00 32.87 1.82
3310 4213 5.106869 CGTCCGGAAATACTTGTCATCAAAA 60.107 40.000 5.23 0.00 32.87 2.44
3311 4214 4.390603 CGTCCGGAAATACTTGTCATCAAA 59.609 41.667 5.23 0.00 32.87 2.69
3312 4215 3.930229 CGTCCGGAAATACTTGTCATCAA 59.070 43.478 5.23 0.00 0.00 2.57
3313 4216 3.517602 CGTCCGGAAATACTTGTCATCA 58.482 45.455 5.23 0.00 0.00 3.07
3314 4217 2.864343 CCGTCCGGAAATACTTGTCATC 59.136 50.000 5.23 0.00 37.50 2.92
3315 4218 2.498481 TCCGTCCGGAAATACTTGTCAT 59.502 45.455 5.23 0.00 42.05 3.06
3316 4219 1.894466 TCCGTCCGGAAATACTTGTCA 59.106 47.619 5.23 0.00 42.05 3.58
3317 4220 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
3318 4221 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
3319 4222 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
3320 4223 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
3321 4224 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
3322 4225 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
3323 4226 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
3324 4227 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
3325 4228 0.967380 GTACTCCCTCCGTCCGGAAA 60.967 60.000 5.23 0.00 44.66 3.13
3326 4229 1.379044 GTACTCCCTCCGTCCGGAA 60.379 63.158 5.23 0.00 44.66 4.30
3327 4230 0.982852 TAGTACTCCCTCCGTCCGGA 60.983 60.000 0.00 0.00 42.90 5.14
3328 4231 0.817229 GTAGTACTCCCTCCGTCCGG 60.817 65.000 0.00 0.00 0.00 5.14
3329 4232 0.817229 GGTAGTACTCCCTCCGTCCG 60.817 65.000 0.00 0.00 0.00 4.79
3330 4233 0.817229 CGGTAGTACTCCCTCCGTCC 60.817 65.000 0.00 0.00 36.99 4.79
3331 4234 2.700329 CGGTAGTACTCCCTCCGTC 58.300 63.158 0.00 0.00 36.99 4.79
3332 4235 4.972875 CGGTAGTACTCCCTCCGT 57.027 61.111 0.00 0.00 36.99 4.69
3333 4236 0.393537 ACACGGTAGTACTCCCTCCG 60.394 60.000 19.65 19.65 45.53 4.63
3334 4237 1.844687 AACACGGTAGTACTCCCTCC 58.155 55.000 0.00 0.00 0.00 4.30
3335 4238 3.758554 TGTTAACACGGTAGTACTCCCTC 59.241 47.826 3.59 0.00 0.00 4.30
3336 4239 3.760684 CTGTTAACACGGTAGTACTCCCT 59.239 47.826 3.59 0.00 0.00 4.20
3337 4240 3.507622 ACTGTTAACACGGTAGTACTCCC 59.492 47.826 3.59 0.00 41.08 4.30
3338 4241 4.479619 CACTGTTAACACGGTAGTACTCC 58.520 47.826 3.59 0.00 40.91 3.85
3339 4242 3.916776 GCACTGTTAACACGGTAGTACTC 59.083 47.826 3.59 0.00 40.91 2.59
3340 4243 3.305608 GGCACTGTTAACACGGTAGTACT 60.306 47.826 3.59 0.00 40.91 2.73
3341 4244 2.989166 GGCACTGTTAACACGGTAGTAC 59.011 50.000 3.59 0.00 40.91 2.73
3342 4245 2.627221 TGGCACTGTTAACACGGTAGTA 59.373 45.455 3.59 0.00 40.91 1.82
3343 4246 1.413445 TGGCACTGTTAACACGGTAGT 59.587 47.619 3.59 0.00 40.91 2.73
3344 4247 2.157834 TGGCACTGTTAACACGGTAG 57.842 50.000 3.59 0.00 40.91 3.18
3345 4248 2.616634 TTGGCACTGTTAACACGGTA 57.383 45.000 3.59 0.00 40.91 4.02
3350 4253 3.876274 TGCTTTTTGGCACTGTTAACA 57.124 38.095 8.28 8.28 37.29 2.41
3361 4264 7.253422 AGATTAACTCGATGAATGCTTTTTGG 58.747 34.615 0.00 0.00 0.00 3.28
3367 4270 6.183360 ACCAGTAGATTAACTCGATGAATGCT 60.183 38.462 0.00 0.00 0.00 3.79
3388 4291 7.974675 ACGTGTTTTTCAGATCATAATACCAG 58.025 34.615 0.00 0.00 0.00 4.00
3416 4319 4.267928 GTCGTCAGGCACATACAGTTAATC 59.732 45.833 0.00 0.00 0.00 1.75
3417 4320 4.181578 GTCGTCAGGCACATACAGTTAAT 58.818 43.478 0.00 0.00 0.00 1.40
3704 4636 0.250338 ACTTTGTGGAGGAGGAACGC 60.250 55.000 0.00 0.00 0.00 4.84
3778 4731 1.001406 AGTGTCTCTTTCCGGCTCAAG 59.999 52.381 0.00 0.00 0.00 3.02
3782 4735 1.587054 CGAGTGTCTCTTTCCGGCT 59.413 57.895 0.00 0.00 0.00 5.52
3787 4740 1.446272 CGGGCCGAGTGTCTCTTTC 60.446 63.158 24.41 0.00 0.00 2.62
3815 4769 2.882324 CCCAAGAAGAAGTAGTCGCTC 58.118 52.381 0.00 0.00 0.00 5.03
3850 4835 7.764443 TCTTCTCACACTAATAGCAACATAACC 59.236 37.037 0.00 0.00 0.00 2.85
3863 4848 3.256879 CCAGAGCAGTCTTCTCACACTAA 59.743 47.826 2.24 0.00 33.15 2.24
3905 4890 2.135139 ACTGCAGTACACACATTCACG 58.865 47.619 20.16 0.00 0.00 4.35
3906 4891 3.123621 GCTACTGCAGTACACACATTCAC 59.876 47.826 22.67 0.00 39.41 3.18
3907 4892 3.325870 GCTACTGCAGTACACACATTCA 58.674 45.455 22.67 0.17 39.41 2.57
3910 4895 1.272490 ACGCTACTGCAGTACACACAT 59.728 47.619 22.67 2.82 39.64 3.21
3911 4896 0.671796 ACGCTACTGCAGTACACACA 59.328 50.000 22.67 3.34 39.64 3.72
3912 4897 2.624316 TACGCTACTGCAGTACACAC 57.376 50.000 22.67 11.16 39.64 3.82
3961 4953 9.129209 CAATACACGGAGAATACATACATACAG 57.871 37.037 0.00 0.00 0.00 2.74
4098 5098 3.323243 TCTACCTTCTAAACAAGCACGC 58.677 45.455 0.00 0.00 0.00 5.34
4099 5099 4.989168 AGTTCTACCTTCTAAACAAGCACG 59.011 41.667 0.00 0.00 0.00 5.34
4100 5100 7.958053 TTAGTTCTACCTTCTAAACAAGCAC 57.042 36.000 0.00 0.00 0.00 4.40
4101 5101 9.569122 AAATTAGTTCTACCTTCTAAACAAGCA 57.431 29.630 0.00 0.00 0.00 3.91
4131 5131 7.571025 AGTTCTACCTTCTGTTACCTCAAAAA 58.429 34.615 0.00 0.00 0.00 1.94
4132 5132 7.133133 AGTTCTACCTTCTGTTACCTCAAAA 57.867 36.000 0.00 0.00 0.00 2.44
4133 5133 6.742559 AGTTCTACCTTCTGTTACCTCAAA 57.257 37.500 0.00 0.00 0.00 2.69
4134 5134 7.672660 TCATAGTTCTACCTTCTGTTACCTCAA 59.327 37.037 0.00 0.00 0.00 3.02
4135 5135 7.122353 GTCATAGTTCTACCTTCTGTTACCTCA 59.878 40.741 0.00 0.00 0.00 3.86
4136 5136 7.339976 AGTCATAGTTCTACCTTCTGTTACCTC 59.660 40.741 0.00 0.00 0.00 3.85
4137 5137 7.183460 AGTCATAGTTCTACCTTCTGTTACCT 58.817 38.462 0.00 0.00 0.00 3.08
4138 5138 7.407393 AGTCATAGTTCTACCTTCTGTTACC 57.593 40.000 0.00 0.00 0.00 2.85
4139 5139 7.760340 CCAAGTCATAGTTCTACCTTCTGTTAC 59.240 40.741 0.00 0.00 0.00 2.50
4140 5140 7.453752 ACCAAGTCATAGTTCTACCTTCTGTTA 59.546 37.037 0.00 0.00 0.00 2.41
4141 5141 6.270231 ACCAAGTCATAGTTCTACCTTCTGTT 59.730 38.462 0.00 0.00 0.00 3.16
4142 5142 5.780793 ACCAAGTCATAGTTCTACCTTCTGT 59.219 40.000 0.00 0.00 0.00 3.41
4143 5143 6.287589 ACCAAGTCATAGTTCTACCTTCTG 57.712 41.667 0.00 0.00 0.00 3.02
4161 5161 3.036431 GGTCCAGAACCCAACCAAG 57.964 57.895 0.00 0.00 42.85 3.61
4223 5223 6.827727 ACACTTGTACTATTCCTCAACAACT 58.172 36.000 0.00 0.00 0.00 3.16
4226 5226 7.062749 AGAACACTTGTACTATTCCTCAACA 57.937 36.000 0.00 0.00 0.00 3.33
4227 5227 8.305317 AGTAGAACACTTGTACTATTCCTCAAC 58.695 37.037 0.00 0.00 37.90 3.18
4230 5230 7.188157 CGAGTAGAACACTTGTACTATTCCTC 58.812 42.308 0.00 0.00 39.54 3.71
4231 5231 6.404513 GCGAGTAGAACACTTGTACTATTCCT 60.405 42.308 0.00 0.00 39.54 3.36
4232 5232 5.742926 GCGAGTAGAACACTTGTACTATTCC 59.257 44.000 0.00 0.00 39.54 3.01
4235 5235 5.892160 TGCGAGTAGAACACTTGTACTAT 57.108 39.130 0.00 0.00 39.54 2.12
4238 5238 5.646467 TTTTGCGAGTAGAACACTTGTAC 57.354 39.130 0.00 0.00 40.41 2.90
4261 5264 6.440647 ACAGAGAAGAGGTTACATGGTCATTA 59.559 38.462 0.00 0.00 0.00 1.90
4264 5267 4.160329 ACAGAGAAGAGGTTACATGGTCA 58.840 43.478 0.00 0.00 0.00 4.02
4298 5303 2.290768 ACTTCATTCAGATGGCTGCTGT 60.291 45.455 0.00 0.00 42.01 4.40
4309 5314 5.614231 CGCTCTGAAAAGACACTTCATTCAG 60.614 44.000 14.54 14.54 43.08 3.02
4350 5355 3.368323 CGAAACAGGGCCTATGCATTTTT 60.368 43.478 5.28 0.00 40.13 1.94
4379 5384 5.360591 CACTGGAATAAGTTCGCCTATTCT 58.639 41.667 0.00 0.00 35.10 2.40
4386 5391 2.396590 TCCCACTGGAATAAGTTCGC 57.603 50.000 0.00 0.00 37.86 4.70
4431 5437 7.639850 CACTGGAATTAGTATGTTTATTGCGTG 59.360 37.037 0.00 0.00 0.00 5.34
4432 5438 7.551262 TCACTGGAATTAGTATGTTTATTGCGT 59.449 33.333 0.00 0.00 0.00 5.24
4473 5480 2.040278 CCTGATCAAAACCAGTCCAGGA 59.960 50.000 0.00 0.00 41.49 3.86
4474 5481 2.440409 CCTGATCAAAACCAGTCCAGG 58.560 52.381 0.00 0.00 34.52 4.45
4483 5666 4.082081 TGTTGGATGATGCCTGATCAAAAC 60.082 41.667 0.00 0.00 44.50 2.43
4495 5678 3.189910 CAGTGTTGGACTGTTGGATGATG 59.810 47.826 0.00 0.00 46.30 3.07
4511 5694 0.533491 TCGGCCGTATAAGCAGTGTT 59.467 50.000 27.15 0.00 0.00 3.32
4512 5695 0.750850 ATCGGCCGTATAAGCAGTGT 59.249 50.000 27.15 0.00 0.00 3.55
4513 5696 1.419374 GATCGGCCGTATAAGCAGTG 58.581 55.000 27.15 0.00 0.00 3.66
4514 5697 0.317479 GGATCGGCCGTATAAGCAGT 59.683 55.000 27.15 0.78 0.00 4.40
4515 5698 0.317160 TGGATCGGCCGTATAAGCAG 59.683 55.000 27.15 0.00 40.66 4.24
4516 5699 0.032952 GTGGATCGGCCGTATAAGCA 59.967 55.000 27.15 3.40 40.66 3.91
4517 5700 0.317479 AGTGGATCGGCCGTATAAGC 59.683 55.000 27.15 8.37 40.66 3.09
4518 5701 3.079578 TCTAGTGGATCGGCCGTATAAG 58.920 50.000 27.15 14.13 40.66 1.73
4519 5702 3.144657 TCTAGTGGATCGGCCGTATAA 57.855 47.619 27.15 5.72 40.66 0.98
4520 5703 2.816087 GTTCTAGTGGATCGGCCGTATA 59.184 50.000 27.15 6.18 40.66 1.47
4521 5704 1.612463 GTTCTAGTGGATCGGCCGTAT 59.388 52.381 27.15 17.27 40.66 3.06
4522 5705 1.027357 GTTCTAGTGGATCGGCCGTA 58.973 55.000 27.15 12.70 40.66 4.02
4523 5706 0.968901 TGTTCTAGTGGATCGGCCGT 60.969 55.000 27.15 12.96 40.66 5.68
4524 5707 0.174845 TTGTTCTAGTGGATCGGCCG 59.825 55.000 22.12 22.12 40.66 6.13
4525 5708 2.396590 TTTGTTCTAGTGGATCGGCC 57.603 50.000 0.00 0.00 37.10 6.13
4526 5709 3.531538 TCATTTGTTCTAGTGGATCGGC 58.468 45.455 0.00 0.00 0.00 5.54
4527 5710 4.759782 ACTCATTTGTTCTAGTGGATCGG 58.240 43.478 0.00 0.00 0.00 4.18
4528 5711 6.727824 AAACTCATTTGTTCTAGTGGATCG 57.272 37.500 0.00 0.00 0.00 3.69
4616 6037 7.519032 TCATGTCATGTATAGATACCGAACA 57.481 36.000 12.54 0.41 32.33 3.18
4620 6043 8.458843 TGTGTATCATGTCATGTATAGATACCG 58.541 37.037 12.54 0.00 37.88 4.02
4638 6061 4.739195 TGTTCGTTCGATGATGTGTATCA 58.261 39.130 0.00 0.00 46.67 2.15


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.