Multiple sequence alignment - TraesCS7B01G399800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G399800 chr7B 100.000 3804 0 0 1 3804 666502081 666505884 0.000000e+00 7025.0
1 TraesCS7B01G399800 chr7B 93.005 1887 86 23 1256 3115 666550688 666552555 0.000000e+00 2712.0
2 TraesCS7B01G399800 chr7B 90.945 254 21 2 3553 3804 666510599 666510852 1.310000e-89 340.0
3 TraesCS7B01G399800 chr7B 94.872 39 2 0 3514 3552 666510507 666510545 1.140000e-05 62.1
4 TraesCS7B01G399800 chr7D 88.173 1708 139 42 1624 3301 591005879 591007553 0.000000e+00 1977.0
5 TraesCS7B01G399800 chr7D 86.545 825 69 25 780 1591 591004989 591005784 0.000000e+00 870.0
6 TraesCS7B01G399800 chr7D 89.800 451 29 5 1631 2078 591014042 591014478 2.570000e-156 562.0
7 TraesCS7B01G399800 chr7D 84.144 555 52 22 2759 3301 591093956 591094486 4.390000e-139 505.0
8 TraesCS7B01G399800 chr7D 86.577 447 33 11 2174 2617 591016071 591016493 5.750000e-128 468.0
9 TraesCS7B01G399800 chr7D 84.568 486 48 19 2759 3232 591074041 591074511 1.250000e-124 457.0
10 TraesCS7B01G399800 chr7D 92.913 254 16 2 3553 3804 591008064 591008317 6.000000e-98 368.0
11 TraesCS7B01G399800 chr7D 89.375 160 10 4 3356 3514 591007692 591007845 1.080000e-45 195.0
12 TraesCS7B01G399800 chr7D 92.029 138 9 2 2617 2752 591091418 591091555 3.880000e-45 193.0
13 TraesCS7B01G399800 chr7D 92.029 138 9 2 2617 2752 591092195 591092332 3.880000e-45 193.0
14 TraesCS7B01G399800 chr7D 91.304 138 10 2 2617 2752 591072052 591072189 1.800000e-43 187.0
15 TraesCS7B01G399800 chr7D 92.437 119 8 1 349 467 591004728 591004845 6.540000e-38 169.0
16 TraesCS7B01G399800 chr7D 86.986 146 9 5 1 137 591004592 591004736 5.090000e-34 156.0
17 TraesCS7B01G399800 chr7D 90.909 77 4 3 610 684 591004866 591004941 2.420000e-17 100.0
18 TraesCS7B01G399800 chr7D 94.872 39 2 0 3514 3552 591007972 591008010 1.140000e-05 62.1
19 TraesCS7B01G399800 chr1D 86.898 374 33 10 986 1355 94414766 94415127 4.580000e-109 405.0
20 TraesCS7B01G399800 chr1D 88.814 295 21 9 1623 1911 475431661 475431373 6.050000e-93 351.0
21 TraesCS7B01G399800 chr1D 94.286 140 7 1 1150 1288 403563413 403563552 2.980000e-51 213.0
22 TraesCS7B01G399800 chr1D 76.667 330 51 18 2371 2688 403564813 403565128 3.930000e-35 159.0
23 TraesCS7B01G399800 chr5D 89.831 295 18 9 1623 1911 481667079 481666791 6.000000e-98 368.0
24 TraesCS7B01G399800 chr2B 89.116 294 22 9 1623 1911 320514890 320514602 1.300000e-94 357.0
25 TraesCS7B01G399800 chr2B 95.261 211 10 0 138 348 795056465 795056255 6.090000e-88 335.0
26 TraesCS7B01G399800 chr4B 88.776 294 24 8 1623 1911 219273502 219273213 6.050000e-93 351.0
27 TraesCS7B01G399800 chr4B 84.659 176 23 2 2339 2514 249057669 249057498 5.050000e-39 172.0
28 TraesCS7B01G399800 chr5B 82.578 419 50 18 1507 1911 37322137 37322546 7.820000e-92 348.0
29 TraesCS7B01G399800 chr5B 95.041 121 6 0 1150 1270 624163610 624163490 1.390000e-44 191.0
30 TraesCS7B01G399800 chr5B 95.041 121 6 0 1150 1270 627763541 627763421 1.390000e-44 191.0
31 TraesCS7B01G399800 chr5B 94.215 121 7 0 1150 1270 325637550 325637430 6.490000e-43 185.0
32 TraesCS7B01G399800 chr2A 84.367 371 39 11 986 1351 251404012 251404368 2.810000e-91 346.0
33 TraesCS7B01G399800 chr6B 95.755 212 9 0 138 349 684532110 684531899 3.640000e-90 342.0
34 TraesCS7B01G399800 chr6B 94.787 211 11 0 138 348 130895619 130895829 2.830000e-86 329.0
35 TraesCS7B01G399800 chr1B 95.283 212 10 0 138 349 191011840 191011629 1.690000e-88 337.0
36 TraesCS7B01G399800 chr1B 95.261 211 10 0 138 348 53647501 53647711 6.090000e-88 335.0
37 TraesCS7B01G399800 chr1B 93.519 216 13 1 134 348 5507042 5507257 1.700000e-83 320.0
38 TraesCS7B01G399800 chr1B 91.429 140 11 1 1150 1288 542929290 542929429 1.390000e-44 191.0
39 TraesCS7B01G399800 chr6A 87.797 295 25 8 1623 1911 595722133 595722422 6.090000e-88 335.0
40 TraesCS7B01G399800 chr3A 95.261 211 10 0 138 348 739754572 739754362 6.090000e-88 335.0
41 TraesCS7B01G399800 chr5A 94.340 212 11 1 138 348 2396543 2396332 1.320000e-84 324.0
42 TraesCS7B01G399800 chr3D 93.548 217 10 4 138 352 554922068 554922282 1.700000e-83 320.0
43 TraesCS7B01G399800 chr1A 95.868 121 5 0 1150 1270 498809555 498809675 3.000000e-46 196.0
44 TraesCS7B01G399800 chr1A 75.610 328 58 17 2371 2688 498810916 498811231 3.960000e-30 143.0
45 TraesCS7B01G399800 chr4A 83.708 178 25 2 2339 2516 358848545 358848372 8.450000e-37 165.0
46 TraesCS7B01G399800 chr4D 82.022 178 21 7 2339 2516 235510088 235510254 1.420000e-29 141.0
47 TraesCS7B01G399800 chr7A 80.165 121 19 4 553 672 464250033 464249917 6.770000e-13 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G399800 chr7B 666502081 666505884 3803 False 7025.0000 7025 100.000000 1 3804 1 chr7B.!!$F1 3803
1 TraesCS7B01G399800 chr7B 666550688 666552555 1867 False 2712.0000 2712 93.005000 1256 3115 1 chr7B.!!$F2 1859
2 TraesCS7B01G399800 chr7D 591014042 591016493 2451 False 515.0000 562 88.188500 1631 2617 2 chr7D.!!$F2 986
3 TraesCS7B01G399800 chr7D 591004592 591008317 3725 False 487.1375 1977 90.276250 1 3804 8 chr7D.!!$F1 3803
4 TraesCS7B01G399800 chr7D 591072052 591074511 2459 False 322.0000 457 87.936000 2617 3232 2 chr7D.!!$F3 615
5 TraesCS7B01G399800 chr7D 591091418 591094486 3068 False 297.0000 505 89.400667 2617 3301 3 chr7D.!!$F4 684

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
228 237 0.033894 GAAAATAAGGCCCGACCCCA 60.034 55.0 0.0 0.0 40.58 4.96 F
314 323 0.107508 ATGAAGTGGGAGCACGGATG 60.108 55.0 0.0 0.0 0.00 3.51 F
1117 1135 0.171007 GGGTTGATGCGGTTGATGTG 59.829 55.0 0.0 0.0 0.00 3.21 F
1118 1136 0.456653 GGTTGATGCGGTTGATGTGC 60.457 55.0 0.0 0.0 0.00 4.57 F
1296 1323 0.512952 CCTCTGTTTTTCTCACGCCG 59.487 55.0 0.0 0.0 0.00 6.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1643 1749 0.395312 AATGGCAGCAAAAGCAAGCT 59.605 45.000 0.00 0.0 42.94 3.74 R
1971 2080 2.656947 ATTGCTACACAACAGTGGGT 57.343 45.000 0.00 0.0 45.78 4.51 R
2620 4266 1.228245 GCAGGCAGTTCCAAGGTCA 60.228 57.895 0.00 0.0 37.29 4.02 R
2671 4317 1.477685 GGGACGAACCAGGGTCAAGA 61.478 60.000 5.03 0.0 41.20 3.02 R
3259 7545 0.865769 ACAAATTCACCAGCGTCGTC 59.134 50.000 0.00 0.0 0.00 4.20 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.048153 GGAGGATGCAAAAGTAGTGTTTC 57.952 43.478 0.00 0.00 0.00 2.78
23 24 4.518970 GGAGGATGCAAAAGTAGTGTTTCA 59.481 41.667 0.00 0.00 0.00 2.69
28 29 9.461312 AGGATGCAAAAGTAGTGTTTCATATAA 57.539 29.630 0.00 0.00 0.00 0.98
31 32 8.942669 TGCAAAAGTAGTGTTTCATATAAACG 57.057 30.769 0.00 0.00 33.05 3.60
59 68 6.930164 ACATGCTTAAATGCTTTCATCACAAA 59.070 30.769 0.00 0.00 31.27 2.83
103 112 2.747446 GCTGGATGTGTTTATGGACGTT 59.253 45.455 0.00 0.00 0.00 3.99
131 140 5.176592 ACGGGAGTAATTAGAGAACAAAGC 58.823 41.667 0.00 0.00 44.60 3.51
132 141 5.046520 ACGGGAGTAATTAGAGAACAAAGCT 60.047 40.000 0.00 0.00 44.60 3.74
133 142 5.875359 CGGGAGTAATTAGAGAACAAAGCTT 59.125 40.000 0.00 0.00 0.00 3.74
134 143 6.036191 CGGGAGTAATTAGAGAACAAAGCTTC 59.964 42.308 0.00 0.00 0.00 3.86
135 144 6.316640 GGGAGTAATTAGAGAACAAAGCTTCC 59.683 42.308 0.00 0.00 0.00 3.46
136 145 7.106890 GGAGTAATTAGAGAACAAAGCTTCCT 58.893 38.462 0.00 0.00 0.00 3.36
137 146 7.065204 GGAGTAATTAGAGAACAAAGCTTCCTG 59.935 40.741 0.00 0.00 0.00 3.86
138 147 6.881602 AGTAATTAGAGAACAAAGCTTCCTGG 59.118 38.462 0.00 0.00 0.00 4.45
139 148 4.974645 TTAGAGAACAAAGCTTCCTGGA 57.025 40.909 0.00 0.00 0.00 3.86
140 149 3.133141 AGAGAACAAAGCTTCCTGGAC 57.867 47.619 0.00 0.00 0.00 4.02
141 150 1.801178 GAGAACAAAGCTTCCTGGACG 59.199 52.381 0.00 0.00 0.00 4.79
142 151 1.416401 AGAACAAAGCTTCCTGGACGA 59.584 47.619 0.00 0.00 0.00 4.20
143 152 1.801178 GAACAAAGCTTCCTGGACGAG 59.199 52.381 0.00 0.00 0.00 4.18
144 153 1.048601 ACAAAGCTTCCTGGACGAGA 58.951 50.000 0.00 0.00 0.00 4.04
145 154 1.270358 ACAAAGCTTCCTGGACGAGAC 60.270 52.381 0.00 0.00 0.00 3.36
146 155 1.001406 CAAAGCTTCCTGGACGAGACT 59.999 52.381 0.00 0.00 0.00 3.24
147 156 1.343069 AAGCTTCCTGGACGAGACTT 58.657 50.000 4.10 2.55 0.00 3.01
148 157 0.605589 AGCTTCCTGGACGAGACTTG 59.394 55.000 4.10 0.00 0.00 3.16
149 158 1.016653 GCTTCCTGGACGAGACTTGC 61.017 60.000 4.10 0.00 0.00 4.01
150 159 0.390472 CTTCCTGGACGAGACTTGCC 60.390 60.000 0.00 0.00 0.00 4.52
151 160 0.832135 TTCCTGGACGAGACTTGCCT 60.832 55.000 0.00 0.00 0.00 4.75
152 161 1.079543 CCTGGACGAGACTTGCCTG 60.080 63.158 0.00 4.68 0.00 4.85
153 162 1.739562 CTGGACGAGACTTGCCTGC 60.740 63.158 0.00 0.00 0.00 4.85
154 163 2.164865 CTGGACGAGACTTGCCTGCT 62.165 60.000 0.00 0.00 0.00 4.24
155 164 1.446966 GGACGAGACTTGCCTGCTC 60.447 63.158 0.00 0.00 0.00 4.26
156 165 1.446966 GACGAGACTTGCCTGCTCC 60.447 63.158 0.00 0.00 0.00 4.70
157 166 2.125350 CGAGACTTGCCTGCTCCC 60.125 66.667 0.00 0.00 0.00 4.30
158 167 2.654079 CGAGACTTGCCTGCTCCCT 61.654 63.158 0.00 0.00 0.00 4.20
159 168 1.220477 GAGACTTGCCTGCTCCCTC 59.780 63.158 0.00 0.00 0.00 4.30
160 169 2.250741 GAGACTTGCCTGCTCCCTCC 62.251 65.000 0.00 0.00 0.00 4.30
161 170 3.334054 ACTTGCCTGCTCCCTCCC 61.334 66.667 0.00 0.00 0.00 4.30
162 171 4.120755 CTTGCCTGCTCCCTCCCC 62.121 72.222 0.00 0.00 0.00 4.81
169 178 4.475135 GCTCCCTCCCCGTGCTTC 62.475 72.222 0.00 0.00 0.00 3.86
170 179 3.787001 CTCCCTCCCCGTGCTTCC 61.787 72.222 0.00 0.00 0.00 3.46
171 180 4.649705 TCCCTCCCCGTGCTTCCA 62.650 66.667 0.00 0.00 0.00 3.53
172 181 3.411517 CCCTCCCCGTGCTTCCAT 61.412 66.667 0.00 0.00 0.00 3.41
173 182 2.190578 CCTCCCCGTGCTTCCATC 59.809 66.667 0.00 0.00 0.00 3.51
174 183 2.190578 CTCCCCGTGCTTCCATCC 59.809 66.667 0.00 0.00 0.00 3.51
175 184 3.740128 CTCCCCGTGCTTCCATCCG 62.740 68.421 0.00 0.00 0.00 4.18
176 185 4.096003 CCCCGTGCTTCCATCCGT 62.096 66.667 0.00 0.00 0.00 4.69
177 186 2.819595 CCCGTGCTTCCATCCGTG 60.820 66.667 0.00 0.00 0.00 4.94
178 187 3.499737 CCGTGCTTCCATCCGTGC 61.500 66.667 0.00 0.00 0.00 5.34
179 188 2.434884 CGTGCTTCCATCCGTGCT 60.435 61.111 0.00 0.00 0.00 4.40
180 189 2.456119 CGTGCTTCCATCCGTGCTC 61.456 63.158 0.00 0.00 0.00 4.26
181 190 2.109126 GTGCTTCCATCCGTGCTCC 61.109 63.158 0.00 0.00 0.00 4.70
182 191 2.514824 GCTTCCATCCGTGCTCCC 60.515 66.667 0.00 0.00 0.00 4.30
183 192 2.202932 CTTCCATCCGTGCTCCCG 60.203 66.667 0.00 0.00 0.00 5.14
184 193 4.467084 TTCCATCCGTGCTCCCGC 62.467 66.667 0.00 0.00 0.00 6.13
187 196 4.201679 CATCCGTGCTCCCGCGTA 62.202 66.667 4.92 0.00 43.11 4.42
188 197 4.203076 ATCCGTGCTCCCGCGTAC 62.203 66.667 4.92 0.00 43.11 3.67
195 204 4.430765 CTCCCGCGTACGTGGCTT 62.431 66.667 36.56 0.00 43.94 4.35
196 205 4.728102 TCCCGCGTACGTGGCTTG 62.728 66.667 36.56 25.05 43.94 4.01
197 206 4.728102 CCCGCGTACGTGGCTTGA 62.728 66.667 36.56 0.00 43.94 3.02
198 207 2.508439 CCGCGTACGTGGCTTGAT 60.508 61.111 32.68 0.00 39.06 2.57
199 208 2.098233 CCGCGTACGTGGCTTGATT 61.098 57.895 32.68 0.00 39.06 2.57
200 209 1.632046 CCGCGTACGTGGCTTGATTT 61.632 55.000 32.68 0.00 39.06 2.17
201 210 0.518355 CGCGTACGTGGCTTGATTTG 60.518 55.000 20.84 0.00 33.53 2.32
202 211 0.793861 GCGTACGTGGCTTGATTTGA 59.206 50.000 17.90 0.00 0.00 2.69
203 212 1.396996 GCGTACGTGGCTTGATTTGAT 59.603 47.619 17.90 0.00 0.00 2.57
204 213 2.159572 GCGTACGTGGCTTGATTTGATT 60.160 45.455 17.90 0.00 0.00 2.57
205 214 3.416277 CGTACGTGGCTTGATTTGATTG 58.584 45.455 7.22 0.00 0.00 2.67
206 215 3.124466 CGTACGTGGCTTGATTTGATTGA 59.876 43.478 7.22 0.00 0.00 2.57
207 216 4.377943 CGTACGTGGCTTGATTTGATTGAA 60.378 41.667 7.22 0.00 0.00 2.69
208 217 4.582701 ACGTGGCTTGATTTGATTGAAA 57.417 36.364 0.00 0.00 0.00 2.69
209 218 4.549458 ACGTGGCTTGATTTGATTGAAAG 58.451 39.130 0.00 0.00 0.00 2.62
210 219 4.278170 ACGTGGCTTGATTTGATTGAAAGA 59.722 37.500 0.00 0.00 0.00 2.52
211 220 5.221224 ACGTGGCTTGATTTGATTGAAAGAA 60.221 36.000 0.00 0.00 0.00 2.52
212 221 5.691305 CGTGGCTTGATTTGATTGAAAGAAA 59.309 36.000 0.00 0.00 0.00 2.52
213 222 6.200665 CGTGGCTTGATTTGATTGAAAGAAAA 59.799 34.615 0.00 0.00 0.00 2.29
214 223 7.095523 CGTGGCTTGATTTGATTGAAAGAAAAT 60.096 33.333 0.00 0.00 0.00 1.82
215 224 9.206870 GTGGCTTGATTTGATTGAAAGAAAATA 57.793 29.630 0.00 0.00 0.00 1.40
216 225 9.775854 TGGCTTGATTTGATTGAAAGAAAATAA 57.224 25.926 0.00 0.00 0.00 1.40
220 229 8.776376 TGATTTGATTGAAAGAAAATAAGGCC 57.224 30.769 0.00 0.00 0.00 5.19
221 230 7.823799 TGATTTGATTGAAAGAAAATAAGGCCC 59.176 33.333 0.00 0.00 0.00 5.80
222 231 5.323371 TGATTGAAAGAAAATAAGGCCCG 57.677 39.130 0.00 0.00 0.00 6.13
223 232 5.013547 TGATTGAAAGAAAATAAGGCCCGA 58.986 37.500 0.00 0.00 0.00 5.14
224 233 4.776795 TTGAAAGAAAATAAGGCCCGAC 57.223 40.909 0.00 0.00 0.00 4.79
225 234 3.086282 TGAAAGAAAATAAGGCCCGACC 58.914 45.455 0.00 0.00 39.61 4.79
226 235 2.139323 AAGAAAATAAGGCCCGACCC 57.861 50.000 0.00 0.00 40.58 4.46
227 236 0.257905 AGAAAATAAGGCCCGACCCC 59.742 55.000 0.00 0.00 40.58 4.95
228 237 0.033894 GAAAATAAGGCCCGACCCCA 60.034 55.000 0.00 0.00 40.58 4.96
229 238 0.323999 AAAATAAGGCCCGACCCCAC 60.324 55.000 0.00 0.00 40.58 4.61
230 239 2.219449 AAATAAGGCCCGACCCCACC 62.219 60.000 0.00 0.00 40.58 4.61
237 246 3.253838 CCGACCCCACCCCTTGAA 61.254 66.667 0.00 0.00 0.00 2.69
238 247 2.836187 CCGACCCCACCCCTTGAAA 61.836 63.158 0.00 0.00 0.00 2.69
239 248 1.151908 CGACCCCACCCCTTGAAAA 59.848 57.895 0.00 0.00 0.00 2.29
240 249 0.251608 CGACCCCACCCCTTGAAAAT 60.252 55.000 0.00 0.00 0.00 1.82
241 250 1.557099 GACCCCACCCCTTGAAAATC 58.443 55.000 0.00 0.00 0.00 2.17
242 251 0.863956 ACCCCACCCCTTGAAAATCA 59.136 50.000 0.00 0.00 0.00 2.57
243 252 1.203174 ACCCCACCCCTTGAAAATCAG 60.203 52.381 0.00 0.00 0.00 2.90
244 253 1.560505 CCCACCCCTTGAAAATCAGG 58.439 55.000 0.00 0.00 0.00 3.86
245 254 1.560505 CCACCCCTTGAAAATCAGGG 58.439 55.000 1.75 1.75 42.66 4.45
270 279 7.978925 GGGGGAGATGATTAGATTAGAAAAGA 58.021 38.462 0.00 0.00 0.00 2.52
271 280 8.440771 GGGGGAGATGATTAGATTAGAAAAGAA 58.559 37.037 0.00 0.00 0.00 2.52
272 281 9.853177 GGGGAGATGATTAGATTAGAAAAGAAA 57.147 33.333 0.00 0.00 0.00 2.52
288 297 8.640091 AGAAAAGAAAAAGAGAAAATGACAGC 57.360 30.769 0.00 0.00 0.00 4.40
289 298 7.708322 AGAAAAGAAAAAGAGAAAATGACAGCC 59.292 33.333 0.00 0.00 0.00 4.85
290 299 5.113502 AGAAAAAGAGAAAATGACAGCCG 57.886 39.130 0.00 0.00 0.00 5.52
291 300 4.580580 AGAAAAAGAGAAAATGACAGCCGT 59.419 37.500 0.00 0.00 0.00 5.68
292 301 5.763204 AGAAAAAGAGAAAATGACAGCCGTA 59.237 36.000 0.00 0.00 0.00 4.02
293 302 5.613358 AAAAGAGAAAATGACAGCCGTAG 57.387 39.130 0.00 0.00 0.00 3.51
307 316 3.669354 CGTAGGATGAAGTGGGAGC 57.331 57.895 0.00 0.00 0.00 4.70
308 317 0.824109 CGTAGGATGAAGTGGGAGCA 59.176 55.000 0.00 0.00 0.00 4.26
309 318 1.471676 CGTAGGATGAAGTGGGAGCAC 60.472 57.143 0.00 0.00 0.00 4.40
310 319 0.824109 TAGGATGAAGTGGGAGCACG 59.176 55.000 0.00 0.00 0.00 5.34
311 320 1.450312 GGATGAAGTGGGAGCACGG 60.450 63.158 0.00 0.00 0.00 4.94
312 321 1.596934 GATGAAGTGGGAGCACGGA 59.403 57.895 0.00 0.00 0.00 4.69
313 322 0.179000 GATGAAGTGGGAGCACGGAT 59.821 55.000 0.00 0.00 0.00 4.18
314 323 0.107508 ATGAAGTGGGAGCACGGATG 60.108 55.000 0.00 0.00 0.00 3.51
315 324 1.450312 GAAGTGGGAGCACGGATGG 60.450 63.158 0.00 0.00 0.00 3.51
316 325 1.899437 GAAGTGGGAGCACGGATGGA 61.899 60.000 0.00 0.00 0.00 3.41
317 326 1.488705 AAGTGGGAGCACGGATGGAA 61.489 55.000 0.00 0.00 0.00 3.53
318 327 1.450312 GTGGGAGCACGGATGGAAG 60.450 63.158 0.00 0.00 0.00 3.46
319 328 1.918293 TGGGAGCACGGATGGAAGT 60.918 57.895 0.00 0.00 0.00 3.01
320 329 0.616395 TGGGAGCACGGATGGAAGTA 60.616 55.000 0.00 0.00 0.00 2.24
321 330 0.759346 GGGAGCACGGATGGAAGTAT 59.241 55.000 0.00 0.00 0.00 2.12
322 331 1.541233 GGGAGCACGGATGGAAGTATG 60.541 57.143 0.00 0.00 0.00 2.39
323 332 1.412710 GGAGCACGGATGGAAGTATGA 59.587 52.381 0.00 0.00 0.00 2.15
324 333 2.546795 GGAGCACGGATGGAAGTATGAG 60.547 54.545 0.00 0.00 0.00 2.90
325 334 2.362397 GAGCACGGATGGAAGTATGAGA 59.638 50.000 0.00 0.00 0.00 3.27
326 335 2.766263 AGCACGGATGGAAGTATGAGAA 59.234 45.455 0.00 0.00 0.00 2.87
327 336 3.126831 GCACGGATGGAAGTATGAGAAG 58.873 50.000 0.00 0.00 0.00 2.85
328 337 3.722147 CACGGATGGAAGTATGAGAAGG 58.278 50.000 0.00 0.00 0.00 3.46
329 338 2.700897 ACGGATGGAAGTATGAGAAGGG 59.299 50.000 0.00 0.00 0.00 3.95
330 339 2.965831 CGGATGGAAGTATGAGAAGGGA 59.034 50.000 0.00 0.00 0.00 4.20
331 340 3.006323 CGGATGGAAGTATGAGAAGGGAG 59.994 52.174 0.00 0.00 0.00 4.30
332 341 3.244387 GGATGGAAGTATGAGAAGGGAGC 60.244 52.174 0.00 0.00 0.00 4.70
333 342 2.832838 TGGAAGTATGAGAAGGGAGCA 58.167 47.619 0.00 0.00 0.00 4.26
334 343 2.768527 TGGAAGTATGAGAAGGGAGCAG 59.231 50.000 0.00 0.00 0.00 4.24
335 344 2.103941 GGAAGTATGAGAAGGGAGCAGG 59.896 54.545 0.00 0.00 0.00 4.85
336 345 1.127343 AGTATGAGAAGGGAGCAGGC 58.873 55.000 0.00 0.00 0.00 4.85
337 346 0.833287 GTATGAGAAGGGAGCAGGCA 59.167 55.000 0.00 0.00 0.00 4.75
338 347 1.210478 GTATGAGAAGGGAGCAGGCAA 59.790 52.381 0.00 0.00 0.00 4.52
339 348 0.255318 ATGAGAAGGGAGCAGGCAAG 59.745 55.000 0.00 0.00 0.00 4.01
340 349 1.748500 GAGAAGGGAGCAGGCAAGC 60.749 63.158 0.00 0.00 0.00 4.01
341 350 2.753446 GAAGGGAGCAGGCAAGCC 60.753 66.667 2.02 2.02 34.23 4.35
342 351 4.729918 AAGGGAGCAGGCAAGCCG 62.730 66.667 5.28 2.12 41.95 5.52
345 354 4.496336 GGAGCAGGCAAGCCGGAT 62.496 66.667 15.46 8.74 41.95 4.18
346 355 2.899339 GAGCAGGCAAGCCGGATC 60.899 66.667 15.46 14.32 39.23 3.36
347 356 4.496336 AGCAGGCAAGCCGGATCC 62.496 66.667 15.46 0.00 41.95 3.36
350 359 2.117156 CAGGCAAGCCGGATCCAAG 61.117 63.158 13.41 3.20 41.95 3.61
358 367 1.227380 CCGGATCCAAGCTTCCTCG 60.227 63.158 13.41 0.00 0.00 4.63
375 384 3.446161 TCCTCGTCCAACGACAAAGATAT 59.554 43.478 0.00 0.00 46.73 1.63
383 392 0.861837 CGACAAAGATATGGCTCGGC 59.138 55.000 0.00 0.00 0.00 5.54
448 457 3.814842 ACTCGCAACATGACAAATCAAGA 59.185 39.130 0.00 0.00 38.69 3.02
456 465 1.142060 TGACAAATCAAGACCACCCGT 59.858 47.619 0.00 0.00 0.00 5.28
458 467 3.181453 TGACAAATCAAGACCACCCGTAA 60.181 43.478 0.00 0.00 0.00 3.18
459 468 3.143728 ACAAATCAAGACCACCCGTAAC 58.856 45.455 0.00 0.00 0.00 2.50
460 469 3.142951 CAAATCAAGACCACCCGTAACA 58.857 45.455 0.00 0.00 0.00 2.41
461 470 3.495434 AATCAAGACCACCCGTAACAA 57.505 42.857 0.00 0.00 0.00 2.83
462 471 3.495434 ATCAAGACCACCCGTAACAAA 57.505 42.857 0.00 0.00 0.00 2.83
463 472 3.278668 TCAAGACCACCCGTAACAAAA 57.721 42.857 0.00 0.00 0.00 2.44
464 473 3.618351 TCAAGACCACCCGTAACAAAAA 58.382 40.909 0.00 0.00 0.00 1.94
486 495 3.564053 AAAAGACCACCCGTAACAAGA 57.436 42.857 0.00 0.00 0.00 3.02
487 496 2.833631 AAGACCACCCGTAACAAGAG 57.166 50.000 0.00 0.00 0.00 2.85
492 501 3.473625 ACCACCCGTAACAAGAGAAAAG 58.526 45.455 0.00 0.00 0.00 2.27
502 511 7.406553 CGTAACAAGAGAAAAGAAACATGACA 58.593 34.615 0.00 0.00 0.00 3.58
520 529 4.728772 TGACAAATCAAGACAACTGGGAT 58.271 39.130 0.00 0.00 0.00 3.85
521 530 4.520111 TGACAAATCAAGACAACTGGGATG 59.480 41.667 0.00 0.00 0.00 3.51
522 531 3.256631 ACAAATCAAGACAACTGGGATGC 59.743 43.478 0.00 0.00 0.00 3.91
523 532 2.885135 ATCAAGACAACTGGGATGCA 57.115 45.000 0.00 0.00 0.00 3.96
524 533 1.896220 TCAAGACAACTGGGATGCAC 58.104 50.000 0.00 0.00 0.00 4.57
525 534 0.883833 CAAGACAACTGGGATGCACC 59.116 55.000 0.00 0.00 38.08 5.01
526 535 0.478072 AAGACAACTGGGATGCACCA 59.522 50.000 7.49 2.05 41.20 4.17
527 536 0.700564 AGACAACTGGGATGCACCAT 59.299 50.000 0.00 0.00 40.36 3.55
528 537 1.076024 AGACAACTGGGATGCACCATT 59.924 47.619 0.00 0.00 40.36 3.16
529 538 1.895131 GACAACTGGGATGCACCATTT 59.105 47.619 0.00 0.00 40.36 2.32
530 539 2.299867 GACAACTGGGATGCACCATTTT 59.700 45.455 0.00 0.00 40.36 1.82
531 540 3.505386 ACAACTGGGATGCACCATTTTA 58.495 40.909 0.00 0.00 40.36 1.52
532 541 4.095946 ACAACTGGGATGCACCATTTTAT 58.904 39.130 0.00 0.00 40.36 1.40
533 542 4.531732 ACAACTGGGATGCACCATTTTATT 59.468 37.500 0.00 0.00 40.36 1.40
534 543 5.012975 ACAACTGGGATGCACCATTTTATTT 59.987 36.000 0.00 0.00 40.36 1.40
535 544 5.760484 ACTGGGATGCACCATTTTATTTT 57.240 34.783 0.00 0.00 40.36 1.82
536 545 6.125589 ACTGGGATGCACCATTTTATTTTT 57.874 33.333 0.00 0.00 40.36 1.94
573 582 9.888878 AAATCTGCATCACATATTATTTCTTCG 57.111 29.630 0.00 0.00 0.00 3.79
574 583 8.837788 ATCTGCATCACATATTATTTCTTCGA 57.162 30.769 0.00 0.00 0.00 3.71
575 584 8.661352 TCTGCATCACATATTATTTCTTCGAA 57.339 30.769 0.00 0.00 0.00 3.71
576 585 8.551205 TCTGCATCACATATTATTTCTTCGAAC 58.449 33.333 0.00 0.00 0.00 3.95
577 586 8.207521 TGCATCACATATTATTTCTTCGAACA 57.792 30.769 0.00 0.00 0.00 3.18
578 587 8.672815 TGCATCACATATTATTTCTTCGAACAA 58.327 29.630 0.00 0.00 0.00 2.83
579 588 9.502145 GCATCACATATTATTTCTTCGAACAAA 57.498 29.630 0.94 0.94 0.00 2.83
599 608 4.622260 AAAGTTCATTTTGATGGGGGTG 57.378 40.909 0.00 0.00 0.00 4.61
600 609 2.539302 AGTTCATTTTGATGGGGGTGG 58.461 47.619 0.00 0.00 0.00 4.61
601 610 2.111613 AGTTCATTTTGATGGGGGTGGA 59.888 45.455 0.00 0.00 0.00 4.02
602 611 2.497273 GTTCATTTTGATGGGGGTGGAG 59.503 50.000 0.00 0.00 0.00 3.86
603 612 1.006998 TCATTTTGATGGGGGTGGAGG 59.993 52.381 0.00 0.00 0.00 4.30
604 613 0.339510 ATTTTGATGGGGGTGGAGGG 59.660 55.000 0.00 0.00 0.00 4.30
605 614 0.778078 TTTTGATGGGGGTGGAGGGA 60.778 55.000 0.00 0.00 0.00 4.20
606 615 1.214305 TTTGATGGGGGTGGAGGGAG 61.214 60.000 0.00 0.00 0.00 4.30
607 616 2.774351 GATGGGGGTGGAGGGAGG 60.774 72.222 0.00 0.00 0.00 4.30
608 617 3.300962 ATGGGGGTGGAGGGAGGA 61.301 66.667 0.00 0.00 0.00 3.71
609 618 3.353689 ATGGGGGTGGAGGGAGGAG 62.354 68.421 0.00 0.00 0.00 3.69
610 619 4.825679 GGGGGTGGAGGGAGGAGG 62.826 77.778 0.00 0.00 0.00 4.30
611 620 4.825679 GGGGTGGAGGGAGGAGGG 62.826 77.778 0.00 0.00 0.00 4.30
643 652 1.665679 GGTGTTGTCATCGCCACTATG 59.334 52.381 8.37 0.00 35.75 2.23
658 667 3.120060 CCACTATGTCTGCAGAACTTTGC 60.120 47.826 20.19 5.30 44.33 3.68
667 676 3.758521 GCAGAACTTTGCAATGAAACG 57.241 42.857 18.35 5.94 43.53 3.60
669 678 3.551485 GCAGAACTTTGCAATGAAACGTT 59.449 39.130 18.35 0.00 43.53 3.99
670 679 4.548726 GCAGAACTTTGCAATGAAACGTTG 60.549 41.667 18.35 8.72 43.53 4.10
705 714 2.978156 TTGATGAGGGGTTGCTCTTT 57.022 45.000 0.00 0.00 0.00 2.52
706 715 2.978156 TGATGAGGGGTTGCTCTTTT 57.022 45.000 0.00 0.00 0.00 2.27
707 716 3.243359 TGATGAGGGGTTGCTCTTTTT 57.757 42.857 0.00 0.00 0.00 1.94
733 742 9.771915 TTTTCTTTTGAGAAATTGCAATGAAAC 57.228 25.926 13.82 6.37 37.59 2.78
734 743 8.721019 TTCTTTTGAGAAATTGCAATGAAACT 57.279 26.923 13.82 9.82 0.00 2.66
735 744 8.721019 TCTTTTGAGAAATTGCAATGAAACTT 57.279 26.923 13.82 2.50 0.00 2.66
736 745 9.165035 TCTTTTGAGAAATTGCAATGAAACTTT 57.835 25.926 13.82 2.62 0.00 2.66
737 746 9.217223 CTTTTGAGAAATTGCAATGAAACTTTG 57.783 29.630 13.82 0.00 0.00 2.77
738 747 6.289745 TGAGAAATTGCAATGAAACTTTGC 57.710 33.333 13.82 12.97 0.00 3.68
739 748 5.236911 TGAGAAATTGCAATGAAACTTTGCC 59.763 36.000 13.82 0.00 0.00 4.52
740 749 5.370679 AGAAATTGCAATGAAACTTTGCCT 58.629 33.333 13.82 0.00 0.00 4.75
751 760 4.704540 TGAAACTTTGCCTGAGAGAAAACA 59.295 37.500 0.00 0.00 0.00 2.83
764 773 5.104259 AGAGAAAACAGTTGTCCTGAGTT 57.896 39.130 0.00 0.00 44.49 3.01
767 776 3.366052 AAACAGTTGTCCTGAGTTGGT 57.634 42.857 0.00 0.00 44.49 3.67
775 784 0.991920 TCCTGAGTTGGTCCATTCCC 59.008 55.000 0.00 0.00 0.00 3.97
779 788 1.630369 TGAGTTGGTCCATTCCCTGAG 59.370 52.381 0.00 0.00 0.00 3.35
780 789 1.909302 GAGTTGGTCCATTCCCTGAGA 59.091 52.381 0.00 0.00 0.00 3.27
781 790 1.912043 AGTTGGTCCATTCCCTGAGAG 59.088 52.381 0.00 0.00 0.00 3.20
782 791 1.630878 GTTGGTCCATTCCCTGAGAGT 59.369 52.381 0.00 0.00 0.00 3.24
783 792 1.573108 TGGTCCATTCCCTGAGAGTC 58.427 55.000 0.00 0.00 0.00 3.36
784 793 0.461961 GGTCCATTCCCTGAGAGTCG 59.538 60.000 0.00 0.00 0.00 4.18
785 794 0.461961 GTCCATTCCCTGAGAGTCGG 59.538 60.000 0.00 0.00 0.00 4.79
786 795 1.144936 CCATTCCCTGAGAGTCGGC 59.855 63.158 0.00 0.00 0.00 5.54
787 796 1.144936 CATTCCCTGAGAGTCGGCC 59.855 63.158 0.00 0.00 0.00 6.13
788 797 2.066999 ATTCCCTGAGAGTCGGCCC 61.067 63.158 0.00 0.00 0.00 5.80
789 798 2.822643 ATTCCCTGAGAGTCGGCCCA 62.823 60.000 0.00 0.00 0.00 5.36
790 799 2.765807 CCCTGAGAGTCGGCCCAT 60.766 66.667 0.00 0.00 0.00 4.00
791 800 1.457643 CCCTGAGAGTCGGCCCATA 60.458 63.158 0.00 0.00 0.00 2.74
792 801 1.742768 CCTGAGAGTCGGCCCATAC 59.257 63.158 0.00 0.00 0.00 2.39
793 802 1.742768 CTGAGAGTCGGCCCATACC 59.257 63.158 0.00 0.00 0.00 2.73
815 824 1.101331 GTATTCGGACTGGACGAGGT 58.899 55.000 0.00 0.00 41.81 3.85
825 834 2.435059 GACGAGGTCCAGCAAGGC 60.435 66.667 0.00 0.00 37.29 4.35
828 837 3.650950 GAGGTCCAGCAAGGCCCA 61.651 66.667 0.00 0.00 38.12 5.36
842 851 2.751436 CCCAACCAGGCGACCATG 60.751 66.667 0.00 0.00 35.39 3.66
869 878 0.179200 GTGGCAGCCACGTAATTTCG 60.179 55.000 28.91 2.65 44.95 3.46
875 884 1.356527 GCCACGTAATTTCGACCGCT 61.357 55.000 11.66 0.00 34.70 5.52
900 909 3.563915 GCCGAACCCTATATACTCCCTCT 60.564 52.174 0.00 0.00 0.00 3.69
943 952 3.646715 CCCCCGAAGAAGCCACCA 61.647 66.667 0.00 0.00 0.00 4.17
956 974 3.086600 CACCAGCCTCCTCCTCCC 61.087 72.222 0.00 0.00 0.00 4.30
957 975 3.288381 ACCAGCCTCCTCCTCCCT 61.288 66.667 0.00 0.00 0.00 4.20
959 977 2.366167 CAGCCTCCTCCTCCCTCA 59.634 66.667 0.00 0.00 0.00 3.86
960 978 2.063378 CAGCCTCCTCCTCCCTCAC 61.063 68.421 0.00 0.00 0.00 3.51
961 979 2.766229 GCCTCCTCCTCCCTCACC 60.766 72.222 0.00 0.00 0.00 4.02
963 981 2.443016 CTCCTCCTCCCTCACCCG 60.443 72.222 0.00 0.00 0.00 5.28
964 982 4.779733 TCCTCCTCCCTCACCCGC 62.780 72.222 0.00 0.00 0.00 6.13
1039 1057 3.384532 TACGAACCGCACCCCTCC 61.385 66.667 0.00 0.00 0.00 4.30
1053 1071 4.548513 CTCCCCCTCTCCCTCCCG 62.549 77.778 0.00 0.00 0.00 5.14
1099 1117 1.153289 CCAGCTGATTCTGTCCCGG 60.153 63.158 17.39 0.00 32.32 5.73
1102 1120 1.201429 AGCTGATTCTGTCCCGGGTT 61.201 55.000 22.86 0.00 0.00 4.11
1104 1122 0.613260 CTGATTCTGTCCCGGGTTGA 59.387 55.000 22.86 14.28 0.00 3.18
1107 1125 0.394352 ATTCTGTCCCGGGTTGATGC 60.394 55.000 22.86 5.73 0.00 3.91
1109 1127 4.402528 TGTCCCGGGTTGATGCGG 62.403 66.667 22.86 0.00 0.00 5.69
1113 1131 2.359354 CCGGGTTGATGCGGTTGA 60.359 61.111 0.00 0.00 0.00 3.18
1114 1132 1.748879 CCGGGTTGATGCGGTTGAT 60.749 57.895 0.00 0.00 0.00 2.57
1116 1134 1.305219 CGGGTTGATGCGGTTGATGT 61.305 55.000 0.00 0.00 0.00 3.06
1117 1135 0.171007 GGGTTGATGCGGTTGATGTG 59.829 55.000 0.00 0.00 0.00 3.21
1118 1136 0.456653 GGTTGATGCGGTTGATGTGC 60.457 55.000 0.00 0.00 0.00 4.57
1296 1323 0.512952 CCTCTGTTTTTCTCACGCCG 59.487 55.000 0.00 0.00 0.00 6.46
1385 1412 1.009829 AGCGGAAATGCAGAATCGAC 58.990 50.000 0.00 0.00 37.31 4.20
1540 1567 1.334556 GTCAATGCCATGCGCTGAATA 59.665 47.619 9.73 0.00 38.78 1.75
1542 1569 2.227149 TCAATGCCATGCGCTGAATATC 59.773 45.455 9.73 0.00 38.78 1.63
1595 1668 1.321474 ATTACAATGCCATGCTCCGG 58.679 50.000 0.00 0.00 0.00 5.14
1643 1749 4.591498 TCCAGTCTGTAGTTTGGCTCTTAA 59.409 41.667 0.00 0.00 0.00 1.85
1771 1880 7.038048 TGTTCAGACAATAGAGTTCATGCTAG 58.962 38.462 0.00 0.00 31.49 3.42
1909 2018 5.710099 CCAGCCTCTTTATTAACACTTCCAA 59.290 40.000 0.00 0.00 0.00 3.53
1965 2074 5.815581 TGGGATACTTGTATTTTGCTGACT 58.184 37.500 0.00 0.00 0.00 3.41
2079 3713 9.268268 TGCATTTGTACTTATTGTAGTATAGCC 57.732 33.333 0.00 0.00 33.49 3.93
2095 3729 1.044790 AGCCTGCAGTTTGGTGCTTT 61.045 50.000 13.81 0.00 44.32 3.51
2117 3751 5.378230 TCTTATGATCCAGCACCATTCTT 57.622 39.130 0.00 0.00 0.00 2.52
2118 3752 5.759059 TCTTATGATCCAGCACCATTCTTT 58.241 37.500 0.00 0.00 0.00 2.52
2135 3769 6.464222 CATTCTTTTCCAGTAGGTAGTCACA 58.536 40.000 0.00 0.00 35.89 3.58
2227 3863 6.315393 CACGTTCAGGCTATTACTAAACCAAT 59.685 38.462 0.00 0.00 0.00 3.16
2233 3871 7.985184 TCAGGCTATTACTAAACCAATAGTGTG 59.015 37.037 0.00 0.00 37.17 3.82
2282 3920 9.629878 TTGGTAACTGTTTAAGATTGTCCTTTA 57.370 29.630 0.00 0.00 37.61 1.85
2298 3936 7.266922 TGTCCTTTATTGGTAGTTGAAACAC 57.733 36.000 0.00 0.00 0.00 3.32
2319 3957 9.862371 AAACACGAGATGGACTCATATTATATC 57.138 33.333 0.00 0.00 45.14 1.63
2320 3958 8.815565 ACACGAGATGGACTCATATTATATCT 57.184 34.615 0.00 0.00 45.14 1.98
2635 4281 1.620822 ATGTTGACCTTGGAACTGCC 58.379 50.000 0.00 0.00 37.10 4.85
2656 4302 1.140375 CGGCAAGTACTACCGGGTC 59.860 63.158 23.23 2.13 43.23 4.46
3056 7331 3.306156 GCTCCTCTAGTGAAACGGAACTT 60.306 47.826 0.00 0.00 45.86 2.66
3062 7337 5.047847 TCTAGTGAAACGGAACTTGAACAG 58.952 41.667 0.00 0.00 45.86 3.16
3069 7344 2.364324 ACGGAACTTGAACAGCTAGTCA 59.636 45.455 0.00 0.00 31.22 3.41
3093 7373 5.406780 ACTTAACTGAAGAATTGCGTGAGAG 59.593 40.000 0.00 0.00 38.65 3.20
3095 7375 3.733337 ACTGAAGAATTGCGTGAGAGTT 58.267 40.909 0.00 0.00 0.00 3.01
3120 7404 5.091431 GTGATGCTTGTGTAATCTTTGCTC 58.909 41.667 0.00 0.00 0.00 4.26
3121 7405 4.156556 TGATGCTTGTGTAATCTTTGCTCC 59.843 41.667 0.00 0.00 0.00 4.70
3122 7406 2.483877 TGCTTGTGTAATCTTTGCTCCG 59.516 45.455 0.00 0.00 0.00 4.63
3127 7412 3.007506 TGTGTAATCTTTGCTCCGGAGAA 59.992 43.478 35.69 24.14 0.00 2.87
3128 7413 4.000988 GTGTAATCTTTGCTCCGGAGAAA 58.999 43.478 35.69 28.97 0.00 2.52
3129 7414 4.636206 GTGTAATCTTTGCTCCGGAGAAAT 59.364 41.667 35.69 18.01 0.00 2.17
3131 7416 2.113860 TCTTTGCTCCGGAGAAATGG 57.886 50.000 35.69 24.03 0.00 3.16
3134 7419 2.806945 TTGCTCCGGAGAAATGGAAT 57.193 45.000 35.69 0.00 32.89 3.01
3136 7421 1.312815 GCTCCGGAGAAATGGAATGG 58.687 55.000 35.69 4.98 32.89 3.16
3137 7422 1.408822 GCTCCGGAGAAATGGAATGGT 60.409 52.381 35.69 0.00 32.89 3.55
3138 7423 2.945890 GCTCCGGAGAAATGGAATGGTT 60.946 50.000 35.69 0.00 32.89 3.67
3144 7429 4.160252 CGGAGAAATGGAATGGTTTGGAAT 59.840 41.667 0.00 0.00 0.00 3.01
3219 7505 0.110486 ATTTCACGGAACCTGGCACT 59.890 50.000 0.00 0.00 0.00 4.40
3240 7526 4.142138 ACTCTAATTTCACTACCGCCAGAG 60.142 45.833 0.00 0.00 34.54 3.35
3251 7537 1.153901 CGCCAGAGCATTGCAAAGG 60.154 57.895 11.91 9.85 39.83 3.11
3253 7539 0.319405 GCCAGAGCATTGCAAAGGTT 59.681 50.000 11.91 0.00 39.53 3.50
3254 7540 1.670967 GCCAGAGCATTGCAAAGGTTC 60.671 52.381 11.91 8.75 38.14 3.62
3256 7542 2.608752 CCAGAGCATTGCAAAGGTTCAC 60.609 50.000 11.91 0.00 40.38 3.18
3258 7544 1.340889 GAGCATTGCAAAGGTTCACCA 59.659 47.619 11.91 0.00 37.78 4.17
3259 7545 1.342174 AGCATTGCAAAGGTTCACCAG 59.658 47.619 11.91 0.00 38.89 4.00
3266 7559 0.878961 AAAGGTTCACCAGACGACGC 60.879 55.000 0.00 0.00 38.89 5.19
3296 7589 1.968493 TGTTACCGAGGCTTGTCTCTT 59.032 47.619 0.12 0.00 0.00 2.85
3301 7594 1.517242 CGAGGCTTGTCTCTTTTGCT 58.483 50.000 0.67 0.00 0.00 3.91
3302 7595 1.196354 CGAGGCTTGTCTCTTTTGCTG 59.804 52.381 0.67 0.00 0.00 4.41
3303 7596 1.538950 GAGGCTTGTCTCTTTTGCTGG 59.461 52.381 0.00 0.00 0.00 4.85
3304 7597 0.600057 GGCTTGTCTCTTTTGCTGGG 59.400 55.000 0.00 0.00 0.00 4.45
3305 7598 0.600057 GCTTGTCTCTTTTGCTGGGG 59.400 55.000 0.00 0.00 0.00 4.96
3306 7599 0.600057 CTTGTCTCTTTTGCTGGGGC 59.400 55.000 0.00 0.00 39.26 5.80
3307 7600 0.185901 TTGTCTCTTTTGCTGGGGCT 59.814 50.000 0.00 0.00 39.59 5.19
3308 7601 0.250901 TGTCTCTTTTGCTGGGGCTC 60.251 55.000 0.00 0.00 39.59 4.70
3311 7604 1.101331 CTCTTTTGCTGGGGCTCATC 58.899 55.000 0.00 0.00 39.59 2.92
3312 7605 0.700564 TCTTTTGCTGGGGCTCATCT 59.299 50.000 0.00 0.00 39.59 2.90
3317 7663 0.182061 TGCTGGGGCTCATCTTGATC 59.818 55.000 0.00 0.00 39.59 2.92
3341 7687 0.896019 CCCATTACCCGTTTGCCACA 60.896 55.000 0.00 0.00 0.00 4.17
3353 7699 4.214119 CCGTTTGCCACAAGATATATCCTG 59.786 45.833 9.18 9.29 0.00 3.86
3354 7700 4.816385 CGTTTGCCACAAGATATATCCTGT 59.184 41.667 10.62 10.62 31.94 4.00
3358 7735 5.853936 TGCCACAAGATATATCCTGTACAC 58.146 41.667 15.11 9.19 30.71 2.90
3381 7758 1.283029 ACAGATGTATGGCTGCTGGTT 59.717 47.619 0.00 0.00 35.57 3.67
3423 7800 3.120786 GGTCCAAAGACGTACACAATTCG 60.121 47.826 0.00 0.00 44.54 3.34
3459 7836 1.296715 GCCTCGGCCATGTATAGGG 59.703 63.158 2.24 0.00 34.56 3.53
3460 7837 1.481056 GCCTCGGCCATGTATAGGGT 61.481 60.000 2.24 0.00 34.56 4.34
3461 7838 1.933021 CCTCGGCCATGTATAGGGTA 58.067 55.000 2.24 0.00 0.00 3.69
3462 7839 2.467880 CCTCGGCCATGTATAGGGTAT 58.532 52.381 2.24 0.00 0.00 2.73
3463 7840 2.168521 CCTCGGCCATGTATAGGGTATG 59.831 54.545 2.24 0.00 0.00 2.39
3464 7841 1.553248 TCGGCCATGTATAGGGTATGC 59.447 52.381 2.24 0.00 0.00 3.14
3465 7842 1.277842 CGGCCATGTATAGGGTATGCA 59.722 52.381 2.24 0.00 35.29 3.96
3466 7843 2.092968 CGGCCATGTATAGGGTATGCAT 60.093 50.000 3.79 3.79 41.29 3.96
3471 7848 3.052455 TGTATAGGGTATGCATTGCGG 57.948 47.619 3.54 0.00 0.00 5.69
3487 7864 4.351054 GGGGTGCTGGTCTGGTGG 62.351 72.222 0.00 0.00 0.00 4.61
3488 7865 3.249189 GGGTGCTGGTCTGGTGGA 61.249 66.667 0.00 0.00 0.00 4.02
3489 7866 2.829384 GGGTGCTGGTCTGGTGGAA 61.829 63.158 0.00 0.00 0.00 3.53
3509 7887 6.009589 TGGAAATCTAAAGCTGACCATTTCA 58.990 36.000 16.98 1.34 33.67 2.69
3544 8049 7.651027 AAATTCTTGCTCCAAGCTATAACAT 57.349 32.000 0.11 0.00 42.97 2.71
3552 8057 4.992688 TCCAAGCTATAACATTTTTGGCG 58.007 39.130 0.00 0.00 36.03 5.69
3553 8058 4.702612 TCCAAGCTATAACATTTTTGGCGA 59.297 37.500 0.00 0.00 36.03 5.54
3555 8060 4.632538 AGCTATAACATTTTTGGCGACC 57.367 40.909 0.00 0.00 0.00 4.79
3556 8061 3.064820 AGCTATAACATTTTTGGCGACCG 59.935 43.478 0.00 0.00 0.00 4.79
3557 8062 3.064271 GCTATAACATTTTTGGCGACCGA 59.936 43.478 0.00 0.00 0.00 4.69
3558 8063 4.261031 GCTATAACATTTTTGGCGACCGAT 60.261 41.667 0.00 0.00 0.00 4.18
3560 8065 1.529226 ACATTTTTGGCGACCGATGA 58.471 45.000 0.00 0.00 0.00 2.92
3561 8066 1.199097 ACATTTTTGGCGACCGATGAC 59.801 47.619 0.00 0.00 0.00 3.06
3578 8136 1.944024 TGACCAACTTGGCTTTGTACG 59.056 47.619 7.81 0.00 42.67 3.67
3584 8142 1.001633 ACTTGGCTTTGTACGGTCGAT 59.998 47.619 0.00 0.00 0.00 3.59
3611 8170 5.069516 AGGTTGAATGTCTTGTCTTTTGCAT 59.930 36.000 0.00 0.00 0.00 3.96
3616 8175 6.039605 TGAATGTCTTGTCTTTTGCATCAAGA 59.960 34.615 5.01 5.01 42.21 3.02
3621 8180 2.813172 TGTCTTTTGCATCAAGATCGCA 59.187 40.909 11.06 3.86 32.86 5.10
3630 8189 3.303197 GCATCAAGATCGCACATTCTCAG 60.303 47.826 0.00 0.00 0.00 3.35
3652 8211 0.826062 TCTCCAATCGCAGATGCTGA 59.174 50.000 2.95 2.82 45.12 4.26
3694 8254 9.274206 GTTTCATAGTAAGTCTTTCTTCACCTT 57.726 33.333 0.00 0.00 37.56 3.50
3758 8318 1.002544 CTCTTCCTCGGTTGCTTCCTT 59.997 52.381 0.00 0.00 0.00 3.36
3765 8325 1.416401 TCGGTTGCTTCCTTGAGAACT 59.584 47.619 0.00 0.00 0.00 3.01
3772 8332 2.880890 GCTTCCTTGAGAACTTGAGCAA 59.119 45.455 0.00 0.00 0.00 3.91
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 9.658475 GCATTTAAGCATGTTACGTTTATATGA 57.342 29.630 0.00 0.00 0.00 2.15
22 23 9.663904 AGCATTTAAGCATGTTACGTTTATATG 57.336 29.630 0.00 0.00 36.85 1.78
28 29 6.442952 TGAAAGCATTTAAGCATGTTACGTT 58.557 32.000 0.00 0.00 39.27 3.99
31 32 7.541783 TGTGATGAAAGCATTTAAGCATGTTAC 59.458 33.333 0.00 0.00 37.16 2.50
59 68 5.355350 GCTTCAGACACTGCCAAATATACTT 59.645 40.000 0.00 0.00 0.00 2.24
103 112 9.558396 TTTGTTCTCTAATTACTCCCGTAAAAA 57.442 29.630 0.00 0.00 38.95 1.94
110 119 6.316640 GGAAGCTTTGTTCTCTAATTACTCCC 59.683 42.308 0.00 0.00 0.00 4.30
111 120 7.065204 CAGGAAGCTTTGTTCTCTAATTACTCC 59.935 40.741 0.00 0.00 0.00 3.85
123 132 1.801178 CTCGTCCAGGAAGCTTTGTTC 59.199 52.381 0.00 0.00 0.00 3.18
128 137 1.001406 CAAGTCTCGTCCAGGAAGCTT 59.999 52.381 0.00 0.00 0.00 3.74
129 138 0.605589 CAAGTCTCGTCCAGGAAGCT 59.394 55.000 0.00 0.00 0.00 3.74
130 139 1.016653 GCAAGTCTCGTCCAGGAAGC 61.017 60.000 0.00 0.00 0.00 3.86
131 140 0.390472 GGCAAGTCTCGTCCAGGAAG 60.390 60.000 0.00 0.00 0.00 3.46
132 141 0.832135 AGGCAAGTCTCGTCCAGGAA 60.832 55.000 0.00 0.00 0.00 3.36
133 142 1.228894 AGGCAAGTCTCGTCCAGGA 60.229 57.895 0.00 0.00 0.00 3.86
134 143 1.079543 CAGGCAAGTCTCGTCCAGG 60.080 63.158 0.00 0.00 0.00 4.45
135 144 1.739562 GCAGGCAAGTCTCGTCCAG 60.740 63.158 0.00 0.00 0.00 3.86
136 145 2.159819 GAGCAGGCAAGTCTCGTCCA 62.160 60.000 0.00 0.00 0.00 4.02
137 146 1.446966 GAGCAGGCAAGTCTCGTCC 60.447 63.158 0.00 0.00 0.00 4.79
138 147 1.446966 GGAGCAGGCAAGTCTCGTC 60.447 63.158 0.00 0.00 0.00 4.20
139 148 2.659610 GGAGCAGGCAAGTCTCGT 59.340 61.111 0.00 0.00 0.00 4.18
140 149 2.125350 GGGAGCAGGCAAGTCTCG 60.125 66.667 0.00 0.00 0.00 4.04
141 150 1.220477 GAGGGAGCAGGCAAGTCTC 59.780 63.158 0.00 0.00 0.00 3.36
142 151 2.297129 GGAGGGAGCAGGCAAGTCT 61.297 63.158 0.00 0.00 0.00 3.24
143 152 2.270527 GGAGGGAGCAGGCAAGTC 59.729 66.667 0.00 0.00 0.00 3.01
144 153 3.334054 GGGAGGGAGCAGGCAAGT 61.334 66.667 0.00 0.00 0.00 3.16
145 154 4.120755 GGGGAGGGAGCAGGCAAG 62.121 72.222 0.00 0.00 0.00 4.01
152 161 4.475135 GAAGCACGGGGAGGGAGC 62.475 72.222 0.00 0.00 0.00 4.70
153 162 3.787001 GGAAGCACGGGGAGGGAG 61.787 72.222 0.00 0.00 0.00 4.30
154 163 3.943137 ATGGAAGCACGGGGAGGGA 62.943 63.158 0.00 0.00 0.00 4.20
155 164 3.406595 GATGGAAGCACGGGGAGGG 62.407 68.421 0.00 0.00 0.00 4.30
156 165 2.190578 GATGGAAGCACGGGGAGG 59.809 66.667 0.00 0.00 0.00 4.30
157 166 2.190578 GGATGGAAGCACGGGGAG 59.809 66.667 0.00 0.00 0.00 4.30
158 167 3.781307 CGGATGGAAGCACGGGGA 61.781 66.667 0.00 0.00 0.00 4.81
159 168 4.096003 ACGGATGGAAGCACGGGG 62.096 66.667 0.00 0.00 0.00 5.73
160 169 2.819595 CACGGATGGAAGCACGGG 60.820 66.667 0.00 0.00 0.00 5.28
161 170 3.499737 GCACGGATGGAAGCACGG 61.500 66.667 0.00 0.00 0.00 4.94
162 171 2.434884 AGCACGGATGGAAGCACG 60.435 61.111 0.00 0.00 0.00 5.34
163 172 2.109126 GGAGCACGGATGGAAGCAC 61.109 63.158 0.00 0.00 0.00 4.40
164 173 2.268920 GGAGCACGGATGGAAGCA 59.731 61.111 0.00 0.00 0.00 3.91
165 174 2.514824 GGGAGCACGGATGGAAGC 60.515 66.667 0.00 0.00 0.00 3.86
166 175 2.202932 CGGGAGCACGGATGGAAG 60.203 66.667 0.00 0.00 0.00 3.46
178 187 4.430765 AAGCCACGTACGCGGGAG 62.431 66.667 25.61 2.82 45.97 4.30
179 188 4.728102 CAAGCCACGTACGCGGGA 62.728 66.667 25.61 0.00 45.97 5.14
180 189 4.728102 TCAAGCCACGTACGCGGG 62.728 66.667 22.89 20.94 43.45 6.13
181 190 1.632046 AAATCAAGCCACGTACGCGG 61.632 55.000 17.94 17.94 43.45 6.46
182 191 0.518355 CAAATCAAGCCACGTACGCG 60.518 55.000 16.72 3.53 44.93 6.01
183 192 0.793861 TCAAATCAAGCCACGTACGC 59.206 50.000 16.72 0.00 0.00 4.42
184 193 3.124466 TCAATCAAATCAAGCCACGTACG 59.876 43.478 15.01 15.01 0.00 3.67
185 194 4.678509 TCAATCAAATCAAGCCACGTAC 57.321 40.909 0.00 0.00 0.00 3.67
186 195 5.471797 TCTTTCAATCAAATCAAGCCACGTA 59.528 36.000 0.00 0.00 0.00 3.57
187 196 4.278170 TCTTTCAATCAAATCAAGCCACGT 59.722 37.500 0.00 0.00 0.00 4.49
188 197 4.797471 TCTTTCAATCAAATCAAGCCACG 58.203 39.130 0.00 0.00 0.00 4.94
189 198 7.481275 TTTTCTTTCAATCAAATCAAGCCAC 57.519 32.000 0.00 0.00 0.00 5.01
190 199 9.775854 TTATTTTCTTTCAATCAAATCAAGCCA 57.224 25.926 0.00 0.00 0.00 4.75
194 203 9.218440 GGCCTTATTTTCTTTCAATCAAATCAA 57.782 29.630 0.00 0.00 0.00 2.57
195 204 7.823799 GGGCCTTATTTTCTTTCAATCAAATCA 59.176 33.333 0.84 0.00 0.00 2.57
196 205 7.010460 CGGGCCTTATTTTCTTTCAATCAAATC 59.990 37.037 0.84 0.00 0.00 2.17
197 206 6.818142 CGGGCCTTATTTTCTTTCAATCAAAT 59.182 34.615 0.84 0.00 0.00 2.32
198 207 6.015010 TCGGGCCTTATTTTCTTTCAATCAAA 60.015 34.615 0.84 0.00 0.00 2.69
199 208 5.478679 TCGGGCCTTATTTTCTTTCAATCAA 59.521 36.000 0.84 0.00 0.00 2.57
200 209 5.013547 TCGGGCCTTATTTTCTTTCAATCA 58.986 37.500 0.84 0.00 0.00 2.57
201 210 5.340803 GTCGGGCCTTATTTTCTTTCAATC 58.659 41.667 0.84 0.00 0.00 2.67
202 211 4.159693 GGTCGGGCCTTATTTTCTTTCAAT 59.840 41.667 0.84 0.00 0.00 2.57
203 212 3.508402 GGTCGGGCCTTATTTTCTTTCAA 59.492 43.478 0.84 0.00 0.00 2.69
204 213 3.086282 GGTCGGGCCTTATTTTCTTTCA 58.914 45.455 0.84 0.00 0.00 2.69
205 214 2.426024 GGGTCGGGCCTTATTTTCTTTC 59.574 50.000 0.84 0.00 37.43 2.62
206 215 2.453521 GGGTCGGGCCTTATTTTCTTT 58.546 47.619 0.84 0.00 37.43 2.52
207 216 1.341679 GGGGTCGGGCCTTATTTTCTT 60.342 52.381 0.84 0.00 37.43 2.52
208 217 0.257905 GGGGTCGGGCCTTATTTTCT 59.742 55.000 0.84 0.00 37.43 2.52
209 218 0.033894 TGGGGTCGGGCCTTATTTTC 60.034 55.000 0.84 0.00 37.43 2.29
210 219 0.323999 GTGGGGTCGGGCCTTATTTT 60.324 55.000 0.84 0.00 37.43 1.82
211 220 1.305287 GTGGGGTCGGGCCTTATTT 59.695 57.895 0.84 0.00 37.43 1.40
212 221 2.686572 GGTGGGGTCGGGCCTTATT 61.687 63.158 0.84 0.00 37.43 1.40
213 222 3.094498 GGTGGGGTCGGGCCTTAT 61.094 66.667 0.84 0.00 37.43 1.73
220 229 2.360439 TTTTCAAGGGGTGGGGTCGG 62.360 60.000 0.00 0.00 0.00 4.79
221 230 0.251608 ATTTTCAAGGGGTGGGGTCG 60.252 55.000 0.00 0.00 0.00 4.79
222 231 1.203125 TGATTTTCAAGGGGTGGGGTC 60.203 52.381 0.00 0.00 0.00 4.46
223 232 0.863956 TGATTTTCAAGGGGTGGGGT 59.136 50.000 0.00 0.00 0.00 4.95
224 233 1.560505 CTGATTTTCAAGGGGTGGGG 58.439 55.000 0.00 0.00 0.00 4.96
225 234 1.560505 CCTGATTTTCAAGGGGTGGG 58.439 55.000 0.00 0.00 0.00 4.61
226 235 1.560505 CCCTGATTTTCAAGGGGTGG 58.439 55.000 0.00 0.00 33.76 4.61
227 236 1.560505 CCCCTGATTTTCAAGGGGTG 58.439 55.000 17.30 0.00 43.09 4.61
245 254 7.978925 TCTTTTCTAATCTAATCATCTCCCCC 58.021 38.462 0.00 0.00 0.00 5.40
246 255 9.853177 TTTCTTTTCTAATCTAATCATCTCCCC 57.147 33.333 0.00 0.00 0.00 4.81
262 271 9.736023 GCTGTCATTTTCTCTTTTTCTTTTCTA 57.264 29.630 0.00 0.00 0.00 2.10
263 272 7.708322 GGCTGTCATTTTCTCTTTTTCTTTTCT 59.292 33.333 0.00 0.00 0.00 2.52
264 273 7.306225 CGGCTGTCATTTTCTCTTTTTCTTTTC 60.306 37.037 0.00 0.00 0.00 2.29
265 274 6.476706 CGGCTGTCATTTTCTCTTTTTCTTTT 59.523 34.615 0.00 0.00 0.00 2.27
266 275 5.979517 CGGCTGTCATTTTCTCTTTTTCTTT 59.020 36.000 0.00 0.00 0.00 2.52
267 276 5.067805 ACGGCTGTCATTTTCTCTTTTTCTT 59.932 36.000 0.00 0.00 0.00 2.52
268 277 4.580580 ACGGCTGTCATTTTCTCTTTTTCT 59.419 37.500 0.00 0.00 0.00 2.52
269 278 4.860072 ACGGCTGTCATTTTCTCTTTTTC 58.140 39.130 0.00 0.00 0.00 2.29
270 279 4.918810 ACGGCTGTCATTTTCTCTTTTT 57.081 36.364 0.00 0.00 0.00 1.94
271 280 4.455877 CCTACGGCTGTCATTTTCTCTTTT 59.544 41.667 0.00 0.00 0.00 2.27
272 281 4.003648 CCTACGGCTGTCATTTTCTCTTT 58.996 43.478 0.00 0.00 0.00 2.52
273 282 3.260884 TCCTACGGCTGTCATTTTCTCTT 59.739 43.478 0.00 0.00 0.00 2.85
274 283 2.832129 TCCTACGGCTGTCATTTTCTCT 59.168 45.455 0.00 0.00 0.00 3.10
275 284 3.247006 TCCTACGGCTGTCATTTTCTC 57.753 47.619 0.00 0.00 0.00 2.87
276 285 3.197766 TCATCCTACGGCTGTCATTTTCT 59.802 43.478 0.00 0.00 0.00 2.52
277 286 3.531538 TCATCCTACGGCTGTCATTTTC 58.468 45.455 0.00 0.00 0.00 2.29
278 287 3.627395 TCATCCTACGGCTGTCATTTT 57.373 42.857 0.00 0.00 0.00 1.82
279 288 3.055094 ACTTCATCCTACGGCTGTCATTT 60.055 43.478 0.00 0.00 0.00 2.32
280 289 2.501723 ACTTCATCCTACGGCTGTCATT 59.498 45.455 0.00 0.00 0.00 2.57
281 290 2.111384 ACTTCATCCTACGGCTGTCAT 58.889 47.619 0.00 0.00 0.00 3.06
282 291 1.204704 CACTTCATCCTACGGCTGTCA 59.795 52.381 0.00 0.00 0.00 3.58
283 292 1.471676 CCACTTCATCCTACGGCTGTC 60.472 57.143 0.00 0.00 0.00 3.51
284 293 0.537188 CCACTTCATCCTACGGCTGT 59.463 55.000 2.42 2.42 0.00 4.40
285 294 0.179073 CCCACTTCATCCTACGGCTG 60.179 60.000 0.00 0.00 0.00 4.85
286 295 0.325296 TCCCACTTCATCCTACGGCT 60.325 55.000 0.00 0.00 0.00 5.52
287 296 0.105039 CTCCCACTTCATCCTACGGC 59.895 60.000 0.00 0.00 0.00 5.68
288 297 0.105039 GCTCCCACTTCATCCTACGG 59.895 60.000 0.00 0.00 0.00 4.02
289 298 0.824109 TGCTCCCACTTCATCCTACG 59.176 55.000 0.00 0.00 0.00 3.51
290 299 1.471676 CGTGCTCCCACTTCATCCTAC 60.472 57.143 0.00 0.00 39.86 3.18
291 300 0.824109 CGTGCTCCCACTTCATCCTA 59.176 55.000 0.00 0.00 39.86 2.94
292 301 1.599047 CGTGCTCCCACTTCATCCT 59.401 57.895 0.00 0.00 39.86 3.24
293 302 1.450312 CCGTGCTCCCACTTCATCC 60.450 63.158 0.00 0.00 39.86 3.51
294 303 0.179000 ATCCGTGCTCCCACTTCATC 59.821 55.000 0.00 0.00 39.86 2.92
295 304 0.107508 CATCCGTGCTCCCACTTCAT 60.108 55.000 0.00 0.00 39.86 2.57
296 305 1.296392 CATCCGTGCTCCCACTTCA 59.704 57.895 0.00 0.00 39.86 3.02
297 306 1.450312 CCATCCGTGCTCCCACTTC 60.450 63.158 0.00 0.00 39.86 3.01
298 307 1.488705 TTCCATCCGTGCTCCCACTT 61.489 55.000 0.00 0.00 39.86 3.16
299 308 1.903877 CTTCCATCCGTGCTCCCACT 61.904 60.000 0.00 0.00 39.86 4.00
300 309 1.450312 CTTCCATCCGTGCTCCCAC 60.450 63.158 0.00 0.00 38.62 4.61
301 310 0.616395 TACTTCCATCCGTGCTCCCA 60.616 55.000 0.00 0.00 0.00 4.37
302 311 0.759346 ATACTTCCATCCGTGCTCCC 59.241 55.000 0.00 0.00 0.00 4.30
303 312 1.412710 TCATACTTCCATCCGTGCTCC 59.587 52.381 0.00 0.00 0.00 4.70
304 313 2.362397 TCTCATACTTCCATCCGTGCTC 59.638 50.000 0.00 0.00 0.00 4.26
305 314 2.388735 TCTCATACTTCCATCCGTGCT 58.611 47.619 0.00 0.00 0.00 4.40
306 315 2.890808 TCTCATACTTCCATCCGTGC 57.109 50.000 0.00 0.00 0.00 5.34
307 316 3.493350 CCCTTCTCATACTTCCATCCGTG 60.493 52.174 0.00 0.00 0.00 4.94
308 317 2.700897 CCCTTCTCATACTTCCATCCGT 59.299 50.000 0.00 0.00 0.00 4.69
309 318 2.965831 TCCCTTCTCATACTTCCATCCG 59.034 50.000 0.00 0.00 0.00 4.18
310 319 3.244387 GCTCCCTTCTCATACTTCCATCC 60.244 52.174 0.00 0.00 0.00 3.51
311 320 3.389329 TGCTCCCTTCTCATACTTCCATC 59.611 47.826 0.00 0.00 0.00 3.51
312 321 3.387962 TGCTCCCTTCTCATACTTCCAT 58.612 45.455 0.00 0.00 0.00 3.41
313 322 2.768527 CTGCTCCCTTCTCATACTTCCA 59.231 50.000 0.00 0.00 0.00 3.53
314 323 2.103941 CCTGCTCCCTTCTCATACTTCC 59.896 54.545 0.00 0.00 0.00 3.46
315 324 2.484594 GCCTGCTCCCTTCTCATACTTC 60.485 54.545 0.00 0.00 0.00 3.01
316 325 1.488393 GCCTGCTCCCTTCTCATACTT 59.512 52.381 0.00 0.00 0.00 2.24
317 326 1.127343 GCCTGCTCCCTTCTCATACT 58.873 55.000 0.00 0.00 0.00 2.12
318 327 0.833287 TGCCTGCTCCCTTCTCATAC 59.167 55.000 0.00 0.00 0.00 2.39
319 328 1.487976 CTTGCCTGCTCCCTTCTCATA 59.512 52.381 0.00 0.00 0.00 2.15
320 329 0.255318 CTTGCCTGCTCCCTTCTCAT 59.745 55.000 0.00 0.00 0.00 2.90
321 330 1.681666 CTTGCCTGCTCCCTTCTCA 59.318 57.895 0.00 0.00 0.00 3.27
322 331 1.748500 GCTTGCCTGCTCCCTTCTC 60.749 63.158 0.00 0.00 0.00 2.87
323 332 2.354343 GCTTGCCTGCTCCCTTCT 59.646 61.111 0.00 0.00 0.00 2.85
324 333 2.753446 GGCTTGCCTGCTCCCTTC 60.753 66.667 4.11 0.00 0.00 3.46
325 334 4.729918 CGGCTTGCCTGCTCCCTT 62.730 66.667 10.12 0.00 0.00 3.95
328 337 4.496336 ATCCGGCTTGCCTGCTCC 62.496 66.667 10.12 0.00 0.00 4.70
329 338 2.899339 GATCCGGCTTGCCTGCTC 60.899 66.667 10.12 0.76 0.00 4.26
330 339 4.496336 GGATCCGGCTTGCCTGCT 62.496 66.667 10.12 0.00 0.00 4.24
331 340 4.802051 TGGATCCGGCTTGCCTGC 62.802 66.667 7.39 0.00 0.00 4.85
332 341 2.045045 TTGGATCCGGCTTGCCTG 60.045 61.111 7.39 3.29 0.00 4.85
333 342 2.273449 CTTGGATCCGGCTTGCCT 59.727 61.111 7.39 0.00 0.00 4.75
334 343 3.521796 GCTTGGATCCGGCTTGCC 61.522 66.667 18.56 0.75 0.00 4.52
335 344 1.997928 GAAGCTTGGATCCGGCTTGC 61.998 60.000 34.36 24.87 44.81 4.01
336 345 1.379642 GGAAGCTTGGATCCGGCTTG 61.380 60.000 34.36 14.53 44.81 4.01
337 346 1.077429 GGAAGCTTGGATCCGGCTT 60.077 57.895 31.60 31.60 46.99 4.35
338 347 1.977293 GAGGAAGCTTGGATCCGGCT 61.977 60.000 21.60 21.60 40.78 5.52
339 348 1.524849 GAGGAAGCTTGGATCCGGC 60.525 63.158 18.29 18.29 40.78 6.13
340 349 1.227380 CGAGGAAGCTTGGATCCGG 60.227 63.158 2.10 0.00 40.78 5.14
341 350 0.528684 GACGAGGAAGCTTGGATCCG 60.529 60.000 2.10 2.70 40.78 4.18
342 351 0.179070 GGACGAGGAAGCTTGGATCC 60.179 60.000 2.10 4.20 35.88 3.36
343 352 0.537188 TGGACGAGGAAGCTTGGATC 59.463 55.000 2.10 0.00 0.00 3.36
344 353 0.984230 TTGGACGAGGAAGCTTGGAT 59.016 50.000 2.10 0.00 0.00 3.41
345 354 0.034896 GTTGGACGAGGAAGCTTGGA 59.965 55.000 2.10 0.00 0.00 3.53
346 355 1.291877 CGTTGGACGAGGAAGCTTGG 61.292 60.000 2.10 0.00 46.05 3.61
347 356 0.319555 TCGTTGGACGAGGAAGCTTG 60.320 55.000 2.10 0.00 46.73 4.01
358 367 3.270877 AGCCATATCTTTGTCGTTGGAC 58.729 45.455 0.00 0.00 43.71 4.02
366 375 2.717639 AAGCCGAGCCATATCTTTGT 57.282 45.000 0.00 0.00 0.00 2.83
392 401 4.586841 CAGGACTAGAATCTTAGGGTGAGG 59.413 50.000 0.00 0.00 0.00 3.86
465 474 3.881089 CTCTTGTTACGGGTGGTCTTTTT 59.119 43.478 0.00 0.00 0.00 1.94
466 475 3.135167 TCTCTTGTTACGGGTGGTCTTTT 59.865 43.478 0.00 0.00 0.00 2.27
467 476 2.701951 TCTCTTGTTACGGGTGGTCTTT 59.298 45.455 0.00 0.00 0.00 2.52
468 477 2.322658 TCTCTTGTTACGGGTGGTCTT 58.677 47.619 0.00 0.00 0.00 3.01
469 478 2.005370 TCTCTTGTTACGGGTGGTCT 57.995 50.000 0.00 0.00 0.00 3.85
470 479 2.825861 TTCTCTTGTTACGGGTGGTC 57.174 50.000 0.00 0.00 0.00 4.02
471 480 3.135167 TCTTTTCTCTTGTTACGGGTGGT 59.865 43.478 0.00 0.00 0.00 4.16
472 481 3.735591 TCTTTTCTCTTGTTACGGGTGG 58.264 45.455 0.00 0.00 0.00 4.61
473 482 5.065474 TGTTTCTTTTCTCTTGTTACGGGTG 59.935 40.000 0.00 0.00 0.00 4.61
474 483 5.187687 TGTTTCTTTTCTCTTGTTACGGGT 58.812 37.500 0.00 0.00 0.00 5.28
475 484 5.744666 TGTTTCTTTTCTCTTGTTACGGG 57.255 39.130 0.00 0.00 0.00 5.28
476 485 6.851330 GTCATGTTTCTTTTCTCTTGTTACGG 59.149 38.462 0.00 0.00 0.00 4.02
477 486 7.406553 TGTCATGTTTCTTTTCTCTTGTTACG 58.593 34.615 0.00 0.00 0.00 3.18
478 487 9.567848 TTTGTCATGTTTCTTTTCTCTTGTTAC 57.432 29.630 0.00 0.00 0.00 2.50
480 489 9.305925 GATTTGTCATGTTTCTTTTCTCTTGTT 57.694 29.630 0.00 0.00 0.00 2.83
481 490 8.469200 TGATTTGTCATGTTTCTTTTCTCTTGT 58.531 29.630 0.00 0.00 0.00 3.16
482 491 8.861033 TGATTTGTCATGTTTCTTTTCTCTTG 57.139 30.769 0.00 0.00 0.00 3.02
483 492 9.525409 CTTGATTTGTCATGTTTCTTTTCTCTT 57.475 29.630 0.00 0.00 0.00 2.85
484 493 8.906867 TCTTGATTTGTCATGTTTCTTTTCTCT 58.093 29.630 0.00 0.00 0.00 3.10
485 494 8.962111 GTCTTGATTTGTCATGTTTCTTTTCTC 58.038 33.333 0.00 0.00 0.00 2.87
486 495 8.469200 TGTCTTGATTTGTCATGTTTCTTTTCT 58.531 29.630 0.00 0.00 0.00 2.52
487 496 8.633075 TGTCTTGATTTGTCATGTTTCTTTTC 57.367 30.769 0.00 0.00 0.00 2.29
492 501 6.418819 CCAGTTGTCTTGATTTGTCATGTTTC 59.581 38.462 0.00 0.00 0.00 2.78
502 511 3.256631 GTGCATCCCAGTTGTCTTGATTT 59.743 43.478 0.00 0.00 0.00 2.17
547 556 9.888878 CGAAGAAATAATATGTGATGCAGATTT 57.111 29.630 0.00 0.00 39.46 2.17
548 557 9.276590 TCGAAGAAATAATATGTGATGCAGATT 57.723 29.630 0.00 0.00 41.37 2.40
549 558 8.837788 TCGAAGAAATAATATGTGATGCAGAT 57.162 30.769 0.00 0.00 0.00 2.90
550 559 8.551205 GTTCGAAGAAATAATATGTGATGCAGA 58.449 33.333 0.00 0.00 45.90 4.26
551 560 8.337532 TGTTCGAAGAAATAATATGTGATGCAG 58.662 33.333 0.00 0.00 45.90 4.41
552 561 8.207521 TGTTCGAAGAAATAATATGTGATGCA 57.792 30.769 0.00 0.00 45.90 3.96
553 562 9.502145 TTTGTTCGAAGAAATAATATGTGATGC 57.498 29.630 15.76 0.00 45.90 3.91
577 586 4.202451 CCACCCCCATCAAAATGAACTTTT 60.202 41.667 0.00 0.00 37.54 2.27
578 587 3.327464 CCACCCCCATCAAAATGAACTTT 59.673 43.478 0.00 0.00 34.61 2.66
579 588 2.905736 CCACCCCCATCAAAATGAACTT 59.094 45.455 0.00 0.00 34.61 2.66
580 589 2.111613 TCCACCCCCATCAAAATGAACT 59.888 45.455 0.00 0.00 34.61 3.01
581 590 2.497273 CTCCACCCCCATCAAAATGAAC 59.503 50.000 0.00 0.00 34.61 3.18
582 591 2.559478 CCTCCACCCCCATCAAAATGAA 60.559 50.000 0.00 0.00 34.61 2.57
583 592 1.006998 CCTCCACCCCCATCAAAATGA 59.993 52.381 0.00 0.00 34.61 2.57
584 593 1.488390 CCTCCACCCCCATCAAAATG 58.512 55.000 0.00 0.00 0.00 2.32
585 594 0.339510 CCCTCCACCCCCATCAAAAT 59.660 55.000 0.00 0.00 0.00 1.82
586 595 0.778078 TCCCTCCACCCCCATCAAAA 60.778 55.000 0.00 0.00 0.00 2.44
587 596 1.151474 TCCCTCCACCCCCATCAAA 60.151 57.895 0.00 0.00 0.00 2.69
588 597 1.619363 CTCCCTCCACCCCCATCAA 60.619 63.158 0.00 0.00 0.00 2.57
589 598 2.042762 CTCCCTCCACCCCCATCA 59.957 66.667 0.00 0.00 0.00 3.07
590 599 2.774351 CCTCCCTCCACCCCCATC 60.774 72.222 0.00 0.00 0.00 3.51
591 600 3.300962 TCCTCCCTCCACCCCCAT 61.301 66.667 0.00 0.00 0.00 4.00
592 601 4.024984 CTCCTCCCTCCACCCCCA 62.025 72.222 0.00 0.00 0.00 4.96
593 602 4.825679 CCTCCTCCCTCCACCCCC 62.826 77.778 0.00 0.00 0.00 5.40
594 603 4.825679 CCCTCCTCCCTCCACCCC 62.826 77.778 0.00 0.00 0.00 4.95
595 604 2.607139 CTACCCTCCTCCCTCCACCC 62.607 70.000 0.00 0.00 0.00 4.61
596 605 1.075151 CTACCCTCCTCCCTCCACC 60.075 68.421 0.00 0.00 0.00 4.61
597 606 1.762858 GCTACCCTCCTCCCTCCAC 60.763 68.421 0.00 0.00 0.00 4.02
598 607 0.629571 TAGCTACCCTCCTCCCTCCA 60.630 60.000 0.00 0.00 0.00 3.86
599 608 0.561680 TTAGCTACCCTCCTCCCTCC 59.438 60.000 0.00 0.00 0.00 4.30
600 609 2.321719 CTTTAGCTACCCTCCTCCCTC 58.678 57.143 0.00 0.00 0.00 4.30
601 610 1.062044 CCTTTAGCTACCCTCCTCCCT 60.062 57.143 0.00 0.00 0.00 4.20
602 611 1.062352 TCCTTTAGCTACCCTCCTCCC 60.062 57.143 0.00 0.00 0.00 4.30
603 612 2.321719 CTCCTTTAGCTACCCTCCTCC 58.678 57.143 0.00 0.00 0.00 4.30
604 613 2.321719 CCTCCTTTAGCTACCCTCCTC 58.678 57.143 0.00 0.00 0.00 3.71
605 614 1.652306 ACCTCCTTTAGCTACCCTCCT 59.348 52.381 0.00 0.00 0.00 3.69
606 615 1.763545 CACCTCCTTTAGCTACCCTCC 59.236 57.143 0.00 0.00 0.00 4.30
607 616 2.468915 ACACCTCCTTTAGCTACCCTC 58.531 52.381 0.00 0.00 0.00 4.30
608 617 2.572104 CAACACCTCCTTTAGCTACCCT 59.428 50.000 0.00 0.00 0.00 4.34
609 618 2.305052 ACAACACCTCCTTTAGCTACCC 59.695 50.000 0.00 0.00 0.00 3.69
610 619 3.007614 TGACAACACCTCCTTTAGCTACC 59.992 47.826 0.00 0.00 0.00 3.18
611 620 4.267349 TGACAACACCTCCTTTAGCTAC 57.733 45.455 0.00 0.00 0.00 3.58
684 693 2.978156 AGAGCAACCCCTCATCAAAA 57.022 45.000 0.00 0.00 34.26 2.44
685 694 2.978156 AAGAGCAACCCCTCATCAAA 57.022 45.000 0.00 0.00 34.26 2.69
686 695 2.978156 AAAGAGCAACCCCTCATCAA 57.022 45.000 0.00 0.00 34.26 2.57
687 696 2.978156 AAAAGAGCAACCCCTCATCA 57.022 45.000 0.00 0.00 34.26 3.07
709 718 8.721019 AGTTTCATTGCAATTTCTCAAAAGAA 57.279 26.923 9.83 4.13 39.78 2.52
711 720 9.217223 CAAAGTTTCATTGCAATTTCTCAAAAG 57.783 29.630 9.83 0.00 0.00 2.27
725 734 5.443185 TTCTCTCAGGCAAAGTTTCATTG 57.557 39.130 0.00 0.00 0.00 2.82
726 735 6.127366 TGTTTTCTCTCAGGCAAAGTTTCATT 60.127 34.615 0.00 0.00 0.00 2.57
727 736 5.360714 TGTTTTCTCTCAGGCAAAGTTTCAT 59.639 36.000 0.00 0.00 0.00 2.57
728 737 4.704540 TGTTTTCTCTCAGGCAAAGTTTCA 59.295 37.500 0.00 0.00 0.00 2.69
729 738 5.163612 ACTGTTTTCTCTCAGGCAAAGTTTC 60.164 40.000 0.00 0.00 36.17 2.78
730 739 4.706962 ACTGTTTTCTCTCAGGCAAAGTTT 59.293 37.500 0.00 0.00 36.17 2.66
731 740 4.273318 ACTGTTTTCTCTCAGGCAAAGTT 58.727 39.130 0.00 0.00 36.17 2.66
732 741 3.891049 ACTGTTTTCTCTCAGGCAAAGT 58.109 40.909 0.00 0.00 36.17 2.66
733 742 4.096984 ACAACTGTTTTCTCTCAGGCAAAG 59.903 41.667 0.00 0.00 36.17 2.77
734 743 4.016444 ACAACTGTTTTCTCTCAGGCAAA 58.984 39.130 0.00 0.00 36.17 3.68
735 744 3.620488 ACAACTGTTTTCTCTCAGGCAA 58.380 40.909 0.00 0.00 36.17 4.52
736 745 3.206150 GACAACTGTTTTCTCTCAGGCA 58.794 45.455 0.00 0.00 36.17 4.75
737 746 2.550180 GGACAACTGTTTTCTCTCAGGC 59.450 50.000 6.64 0.00 36.17 4.85
738 747 3.812053 CAGGACAACTGTTTTCTCTCAGG 59.188 47.826 6.64 0.00 42.42 3.86
751 760 1.507140 TGGACCAACTCAGGACAACT 58.493 50.000 0.00 0.00 0.00 3.16
764 773 1.573108 GACTCTCAGGGAATGGACCA 58.427 55.000 0.00 0.00 0.00 4.02
767 776 1.330655 GCCGACTCTCAGGGAATGGA 61.331 60.000 0.00 0.00 0.00 3.41
775 784 1.742768 GGTATGGGCCGACTCTCAG 59.257 63.158 0.00 0.00 0.00 3.35
784 793 0.601841 CCGAATACACGGTATGGGCC 60.602 60.000 0.00 0.00 46.70 5.80
785 794 2.908817 CCGAATACACGGTATGGGC 58.091 57.895 0.00 0.00 46.70 5.36
793 802 0.448990 TCGTCCAGTCCGAATACACG 59.551 55.000 0.00 0.00 0.00 4.49
794 803 1.202268 CCTCGTCCAGTCCGAATACAC 60.202 57.143 0.00 0.00 33.34 2.90
795 804 1.100510 CCTCGTCCAGTCCGAATACA 58.899 55.000 0.00 0.00 33.34 2.29
796 805 1.065251 GACCTCGTCCAGTCCGAATAC 59.935 57.143 0.00 0.00 33.34 1.89
797 806 1.386533 GACCTCGTCCAGTCCGAATA 58.613 55.000 0.00 0.00 33.34 1.75
798 807 2.190756 GACCTCGTCCAGTCCGAAT 58.809 57.895 0.00 0.00 33.34 3.34
799 808 3.677527 GACCTCGTCCAGTCCGAA 58.322 61.111 0.00 0.00 33.34 4.30
809 818 4.021925 GGCCTTGCTGGACCTCGT 62.022 66.667 0.00 0.00 38.13 4.18
815 824 3.506743 TGGTTGGGCCTTGCTGGA 61.507 61.111 4.53 0.00 38.35 3.86
825 834 2.751436 CATGGTCGCCTGGTTGGG 60.751 66.667 0.00 0.00 36.00 4.12
856 865 1.059838 GCGGTCGAAATTACGTGGC 59.940 57.895 0.00 0.00 34.70 5.01
875 884 2.440409 GAGTATATAGGGTTCGGCCGA 58.560 52.381 27.28 27.28 38.44 5.54
900 909 3.072468 CGGTAGGGTTGGGAGCGA 61.072 66.667 0.00 0.00 36.22 4.93
943 952 2.366570 GTGAGGGAGGAGGAGGCT 59.633 66.667 0.00 0.00 0.00 4.58
1066 1084 4.465446 TGGGAGCCGAGGAGAGGG 62.465 72.222 0.00 0.00 0.00 4.30
1067 1085 2.837291 CTGGGAGCCGAGGAGAGG 60.837 72.222 0.00 0.00 0.00 3.69
1068 1086 3.535962 GCTGGGAGCCGAGGAGAG 61.536 72.222 0.67 0.00 34.48 3.20
1069 1087 4.067512 AGCTGGGAGCCGAGGAGA 62.068 66.667 0.67 0.00 43.77 3.71
1070 1088 3.847602 CAGCTGGGAGCCGAGGAG 61.848 72.222 5.57 0.00 43.77 3.69
1082 1100 1.153289 CCCGGGACAGAATCAGCTG 60.153 63.158 18.48 7.63 41.63 4.24
1099 1117 0.456653 GCACATCAACCGCATCAACC 60.457 55.000 0.00 0.00 0.00 3.77
1102 1120 1.026182 GGAGCACATCAACCGCATCA 61.026 55.000 0.00 0.00 0.00 3.07
1104 1122 2.108514 CGGAGCACATCAACCGCAT 61.109 57.895 0.00 0.00 38.98 4.73
1123 1146 2.203800 TCGAATCGAAATCCGTCAGG 57.796 50.000 1.57 0.00 39.75 3.86
1296 1323 3.857909 GGACGAACCGAGACAAGC 58.142 61.111 0.00 0.00 0.00 4.01
1385 1412 2.060383 TCCCAGATCTGTGAGCCGG 61.060 63.158 21.11 13.60 0.00 6.13
1595 1668 5.824904 ACTGCATTGAACATCCTAACATC 57.175 39.130 0.00 0.00 0.00 3.06
1643 1749 0.395312 AATGGCAGCAAAAGCAAGCT 59.605 45.000 0.00 0.00 42.94 3.74
1668 1777 5.165911 AGAAATAGCAGTTGCATTCATCG 57.834 39.130 6.90 0.00 45.16 3.84
1771 1880 6.808212 CCATTCAAACAATACAGTGATTGTCC 59.192 38.462 16.29 0.00 46.84 4.02
1909 2018 4.352298 GTCCCCCAGATATGGAAGAAATCT 59.648 45.833 8.28 0.00 0.00 2.40
1965 2074 4.101274 TGCTACACAACAGTGGGTACTAAA 59.899 41.667 0.00 0.00 40.60 1.85
1971 2080 2.656947 ATTGCTACACAACAGTGGGT 57.343 45.000 0.00 0.00 45.78 4.51
2032 2142 6.007076 TGCACAATCCACCTACAAATTCTAA 58.993 36.000 0.00 0.00 0.00 2.10
2079 3713 2.877043 AAGAAAGCACCAAACTGCAG 57.123 45.000 13.48 13.48 39.86 4.41
2095 3729 5.378230 AAGAATGGTGCTGGATCATAAGA 57.622 39.130 0.00 0.00 0.00 2.10
2117 3751 6.325545 TCTCTTTTGTGACTACCTACTGGAAA 59.674 38.462 0.00 0.00 37.04 3.13
2118 3752 5.836898 TCTCTTTTGTGACTACCTACTGGAA 59.163 40.000 0.00 0.00 37.04 3.53
2135 3769 4.261801 CGGTGTGGGAATACATCTCTTTT 58.738 43.478 0.00 0.00 32.43 2.27
2227 3863 6.937392 TGGTATAAGCATTACACACACACTA 58.063 36.000 0.00 0.00 27.14 2.74
2257 3895 9.802039 ATAAAGGACAATCTTAAACAGTTACCA 57.198 29.630 0.00 0.00 0.00 3.25
2282 3920 4.695455 CCATCTCGTGTTTCAACTACCAAT 59.305 41.667 0.00 0.00 0.00 3.16
2292 3930 9.862371 ATATAATATGAGTCCATCTCGTGTTTC 57.138 33.333 4.87 0.00 45.46 2.78
2329 3967 6.899393 ACAGAGCCTCATGTAAATGAAAAA 57.101 33.333 0.00 0.00 0.00 1.94
2334 3972 5.885230 TTGAACAGAGCCTCATGTAAATG 57.115 39.130 0.00 0.00 0.00 2.32
2335 3973 7.831193 ACTATTTGAACAGAGCCTCATGTAAAT 59.169 33.333 0.00 3.25 0.00 1.40
2344 3982 7.885399 ACAAATTAGACTATTTGAACAGAGCCT 59.115 33.333 14.08 0.00 44.49 4.58
2378 4016 6.552008 AGGATAATCAACTTCCCTGAACAAA 58.448 36.000 0.00 0.00 0.00 2.83
2620 4266 1.228245 GCAGGCAGTTCCAAGGTCA 60.228 57.895 0.00 0.00 37.29 4.02
2635 4281 1.518572 CCGGTAGTACTTGCCGCAG 60.519 63.158 24.47 13.51 43.70 5.18
2671 4317 1.477685 GGGACGAACCAGGGTCAAGA 61.478 60.000 5.03 0.00 41.20 3.02
2974 7247 4.258543 CGCAAGGTAAAAAGGACCATAGA 58.741 43.478 0.00 0.00 39.65 1.98
2992 7265 5.106197 ACAGAACTAATCATCAATTGCGCAA 60.106 36.000 27.24 27.24 0.00 4.85
3056 7331 5.784578 TCAGTTAAGTGACTAGCTGTTCA 57.215 39.130 8.98 0.00 33.29 3.18
3062 7337 6.538444 GCAATTCTTCAGTTAAGTGACTAGC 58.462 40.000 12.62 7.76 36.51 3.42
3069 7344 5.297547 TCTCACGCAATTCTTCAGTTAAGT 58.702 37.500 0.00 0.00 36.51 2.24
3093 7373 5.376854 AAGATTACACAAGCATCACCAAC 57.623 39.130 0.00 0.00 0.00 3.77
3095 7375 4.321156 GCAAAGATTACACAAGCATCACCA 60.321 41.667 0.00 0.00 0.00 4.17
3120 7404 2.166254 CCAAACCATTCCATTTCTCCGG 59.834 50.000 0.00 0.00 0.00 5.14
3121 7405 3.088532 TCCAAACCATTCCATTTCTCCG 58.911 45.455 0.00 0.00 0.00 4.63
3122 7406 5.422145 CATTCCAAACCATTCCATTTCTCC 58.578 41.667 0.00 0.00 0.00 3.71
3127 7412 5.581350 AAACCATTCCAAACCATTCCATT 57.419 34.783 0.00 0.00 0.00 3.16
3128 7413 5.581350 AAAACCATTCCAAACCATTCCAT 57.419 34.783 0.00 0.00 0.00 3.41
3129 7414 5.128919 CAAAAACCATTCCAAACCATTCCA 58.871 37.500 0.00 0.00 0.00 3.53
3131 7416 6.691754 AACAAAAACCATTCCAAACCATTC 57.308 33.333 0.00 0.00 0.00 2.67
3134 7419 4.631813 CGAAACAAAAACCATTCCAAACCA 59.368 37.500 0.00 0.00 0.00 3.67
3136 7421 4.495019 GGCGAAACAAAAACCATTCCAAAC 60.495 41.667 0.00 0.00 0.00 2.93
3137 7422 3.623510 GGCGAAACAAAAACCATTCCAAA 59.376 39.130 0.00 0.00 0.00 3.28
3138 7423 3.198872 GGCGAAACAAAAACCATTCCAA 58.801 40.909 0.00 0.00 0.00 3.53
3144 7429 1.586564 CGCGGCGAAACAAAAACCA 60.587 52.632 19.16 0.00 0.00 3.67
3206 7492 2.403252 AATTAGAGTGCCAGGTTCCG 57.597 50.000 0.00 0.00 0.00 4.30
3208 7494 4.327680 AGTGAAATTAGAGTGCCAGGTTC 58.672 43.478 0.00 0.00 0.00 3.62
3219 7505 3.430374 GCTCTGGCGGTAGTGAAATTAGA 60.430 47.826 0.00 0.00 0.00 2.10
3240 7526 1.340889 TCTGGTGAACCTTTGCAATGC 59.659 47.619 0.00 0.00 36.82 3.56
3251 7537 2.022129 CCAGCGTCGTCTGGTGAAC 61.022 63.158 20.80 0.00 46.59 3.18
3258 7544 1.148310 CAAATTCACCAGCGTCGTCT 58.852 50.000 0.00 0.00 0.00 4.18
3259 7545 0.865769 ACAAATTCACCAGCGTCGTC 59.134 50.000 0.00 0.00 0.00 4.20
3266 7559 2.161609 GCCTCGGTAACAAATTCACCAG 59.838 50.000 0.00 0.00 32.32 4.00
3296 7589 0.405198 TCAAGATGAGCCCCAGCAAA 59.595 50.000 0.00 0.00 43.56 3.68
3305 7598 1.064463 TGGGTTGGGATCAAGATGAGC 60.064 52.381 0.00 0.00 32.92 4.26
3306 7599 3.589951 ATGGGTTGGGATCAAGATGAG 57.410 47.619 0.00 0.00 32.92 2.90
3307 7600 4.386312 GGTAATGGGTTGGGATCAAGATGA 60.386 45.833 0.00 0.00 32.92 2.92
3308 7601 3.891366 GGTAATGGGTTGGGATCAAGATG 59.109 47.826 0.00 0.00 32.92 2.90
3311 7604 2.666317 GGGTAATGGGTTGGGATCAAG 58.334 52.381 0.00 0.00 32.92 3.02
3312 7605 1.064314 CGGGTAATGGGTTGGGATCAA 60.064 52.381 0.00 0.00 0.00 2.57
3317 7663 0.892063 CAAACGGGTAATGGGTTGGG 59.108 55.000 0.00 0.00 0.00 4.12
3320 7666 0.178958 TGGCAAACGGGTAATGGGTT 60.179 50.000 0.00 0.00 0.00 4.11
3341 7687 5.535030 TCTGTGCGTGTACAGGATATATCTT 59.465 40.000 19.35 1.81 46.26 2.40
3353 7699 1.593006 GCCATACATCTGTGCGTGTAC 59.407 52.381 0.00 0.00 34.00 2.90
3354 7700 1.480545 AGCCATACATCTGTGCGTGTA 59.519 47.619 0.00 0.00 35.49 2.90
3358 7735 0.812811 AGCAGCCATACATCTGTGCG 60.813 55.000 0.00 0.00 36.04 5.34
3365 7742 2.742428 ATCAACCAGCAGCCATACAT 57.258 45.000 0.00 0.00 0.00 2.29
3381 7758 5.247110 GGACCAGATGCTATTCTAGGAATCA 59.753 44.000 0.00 0.00 0.00 2.57
3458 7835 3.119193 CACCCCGCAATGCATACC 58.881 61.111 5.91 0.00 0.00 2.73
3459 7836 2.120909 AGCACCCCGCAATGCATAC 61.121 57.895 5.91 0.00 46.13 2.39
3460 7837 2.120282 CAGCACCCCGCAATGCATA 61.120 57.895 5.91 0.00 46.13 3.14
3461 7838 3.454573 CAGCACCCCGCAATGCAT 61.455 61.111 5.91 0.00 46.13 3.96
3464 7841 3.443045 GACCAGCACCCCGCAATG 61.443 66.667 0.00 0.00 46.13 2.82
3465 7842 3.650950 AGACCAGCACCCCGCAAT 61.651 61.111 0.00 0.00 46.13 3.56
3466 7843 4.641645 CAGACCAGCACCCCGCAA 62.642 66.667 0.00 0.00 46.13 4.85
3471 7848 2.351924 TTTCCACCAGACCAGCACCC 62.352 60.000 0.00 0.00 0.00 4.61
3479 7856 4.393371 GTCAGCTTTAGATTTCCACCAGAC 59.607 45.833 0.00 0.00 0.00 3.51
3514 7892 8.752005 ATAGCTTGGAGCAAGAATTTATGTTA 57.248 30.769 0.00 0.00 45.56 2.41
3544 8049 0.535328 TGGTCATCGGTCGCCAAAAA 60.535 50.000 0.00 0.00 0.00 1.94
3552 8057 0.321653 AGCCAAGTTGGTCATCGGTC 60.322 55.000 22.85 3.88 40.46 4.79
3553 8058 0.110486 AAGCCAAGTTGGTCATCGGT 59.890 50.000 22.85 0.00 40.46 4.69
3555 8060 1.608590 ACAAAGCCAAGTTGGTCATCG 59.391 47.619 22.85 10.62 40.46 3.84
3556 8061 3.364964 CGTACAAAGCCAAGTTGGTCATC 60.365 47.826 22.85 6.46 40.46 2.92
3557 8062 2.552315 CGTACAAAGCCAAGTTGGTCAT 59.448 45.455 22.85 7.14 40.46 3.06
3558 8063 1.944024 CGTACAAAGCCAAGTTGGTCA 59.056 47.619 22.85 0.04 40.46 4.02
3560 8065 1.314730 CCGTACAAAGCCAAGTTGGT 58.685 50.000 22.85 7.42 40.46 3.67
3561 8066 1.265905 GACCGTACAAAGCCAAGTTGG 59.734 52.381 18.17 18.17 41.55 3.77
3578 8136 4.657436 AGACATTCAACCTCTATCGACC 57.343 45.455 0.00 0.00 0.00 4.79
3584 8142 6.017109 GCAAAAGACAAGACATTCAACCTCTA 60.017 38.462 0.00 0.00 0.00 2.43
3611 8170 2.274437 GCTGAGAATGTGCGATCTTGA 58.726 47.619 0.00 0.00 0.00 3.02
3621 8180 2.736719 CGATTGGAGACGCTGAGAATGT 60.737 50.000 0.00 0.00 0.00 2.71
3630 8189 1.930100 CATCTGCGATTGGAGACGC 59.070 57.895 6.28 0.00 45.98 5.19
3632 8191 0.935898 CAGCATCTGCGATTGGAGAC 59.064 55.000 6.28 0.00 45.98 3.36
3694 8254 2.688507 GGAGATCTGTTTGCGTCTTCA 58.311 47.619 0.00 0.00 0.00 3.02
3702 8262 1.197721 GGTGTTGCGGAGATCTGTTTG 59.802 52.381 0.00 0.00 0.00 2.93
3726 8286 3.429547 CCGAGGAAGAGATTAGTGGTGTG 60.430 52.174 0.00 0.00 0.00 3.82
3758 8318 6.542005 TGAAATTGTAGTTGCTCAAGTTCTCA 59.458 34.615 15.27 0.00 43.90 3.27
3765 8325 5.067674 ACTTGCTGAAATTGTAGTTGCTCAA 59.932 36.000 0.00 0.00 0.00 3.02
3772 8332 5.594317 AGAAACCACTTGCTGAAATTGTAGT 59.406 36.000 0.00 0.00 0.00 2.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.