Multiple sequence alignment - TraesCS7B01G394400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G394400 chr7B 100.000 2600 0 0 1 2600 661912110 661914709 0.000000e+00 4802.0
1 TraesCS7B01G394400 chr7B 90.631 523 35 9 1234 1744 662311423 662310903 0.000000e+00 682.0
2 TraesCS7B01G394400 chr7B 93.289 447 25 5 1234 1680 661999066 661999507 0.000000e+00 654.0
3 TraesCS7B01G394400 chr7B 90.078 514 33 13 1234 1744 674194395 674194893 0.000000e+00 651.0
4 TraesCS7B01G394400 chr7B 94.634 410 20 2 1235 1644 661716736 661717143 3.650000e-178 634.0
5 TraesCS7B01G394400 chr7B 87.763 523 45 13 1234 1743 662651454 662651970 6.200000e-166 593.0
6 TraesCS7B01G394400 chr7B 85.321 327 34 10 743 1059 662311737 662311415 2.500000e-85 326.0
7 TraesCS7B01G394400 chr7B 99.438 178 0 1 1058 1234 684563374 684563197 3.230000e-84 322.0
8 TraesCS7B01G394400 chr7B 85.209 311 31 9 761 1059 661998767 661999074 3.250000e-79 305.0
9 TraesCS7B01G394400 chr7B 87.407 270 8 8 1770 2037 661717704 661717949 1.180000e-73 287.0
10 TraesCS7B01G394400 chr7B 82.178 303 34 8 2036 2322 662000773 662001071 2.590000e-60 243.0
11 TraesCS7B01G394400 chr7B 90.395 177 17 0 1699 1875 662000321 662000497 1.560000e-57 233.0
12 TraesCS7B01G394400 chr7B 80.251 319 44 12 758 1060 661468909 661469224 3.370000e-54 222.0
13 TraesCS7B01G394400 chr7B 81.959 194 20 6 1936 2115 662310753 662310561 1.610000e-32 150.0
14 TraesCS7B01G394400 chr7B 88.235 102 8 4 2015 2113 661469651 661469751 4.550000e-23 119.0
15 TraesCS7B01G394400 chr7B 80.583 103 13 4 2400 2496 21941232 21941131 3.590000e-09 73.1
16 TraesCS7B01G394400 chr7B 82.222 90 11 1 2450 2539 22041731 22041647 3.590000e-09 73.1
17 TraesCS7B01G394400 chr7B 82.222 90 11 1 2450 2539 22054650 22054566 3.590000e-09 73.1
18 TraesCS7B01G394400 chr7D 93.933 511 24 3 1235 1744 588471714 588471210 0.000000e+00 765.0
19 TraesCS7B01G394400 chr7D 93.096 449 25 3 1235 1682 588409362 588409805 0.000000e+00 652.0
20 TraesCS7B01G394400 chr7D 86.557 305 35 5 758 1059 596092639 596092940 5.360000e-87 331.0
21 TraesCS7B01G394400 chr7D 85.321 327 36 11 743 1059 588409045 588409369 6.940000e-86 327.0
22 TraesCS7B01G394400 chr7D 79.747 316 38 15 758 1059 588252799 588253102 3.390000e-49 206.0
23 TraesCS7B01G394400 chr7D 78.846 364 33 21 1770 2115 588471066 588470729 3.390000e-49 206.0
24 TraesCS7B01G394400 chr7D 79.233 313 39 15 761 1059 588472007 588471707 7.340000e-46 195.0
25 TraesCS7B01G394400 chr7D 88.496 113 9 4 2005 2115 588253521 588253631 1.620000e-27 134.0
26 TraesCS7B01G394400 chr7D 88.571 70 7 1 2138 2207 574855259 574855191 1.660000e-12 84.2
27 TraesCS7B01G394400 chr7D 81.250 112 10 7 925 1032 588540905 588541009 2.140000e-11 80.5
28 TraesCS7B01G394400 chr7A 94.250 400 22 1 1235 1634 680244650 680245048 6.150000e-171 610.0
29 TraesCS7B01G394400 chr7A 90.022 451 39 5 1234 1680 689252298 689252746 1.730000e-161 579.0
30 TraesCS7B01G394400 chr7A 97.906 191 4 0 1052 1242 193685408 193685218 5.360000e-87 331.0
31 TraesCS7B01G394400 chr7A 84.795 342 32 12 2036 2361 680245742 680246079 2.500000e-85 326.0
32 TraesCS7B01G394400 chr7A 83.228 316 35 12 761 1059 680264778 680264464 9.170000e-70 274.0
33 TraesCS7B01G394400 chr7A 80.442 317 43 13 758 1059 680244345 680244657 9.360000e-55 224.0
34 TraesCS7B01G394400 chr7A 97.222 36 1 0 1711 1746 689252757 689252792 7.770000e-06 62.1
35 TraesCS7B01G394400 chr3D 84.691 614 57 14 1 587 455041159 455040556 1.730000e-161 579.0
36 TraesCS7B01G394400 chr3D 85.309 388 35 17 679 1058 455037721 455037348 5.250000e-102 381.0
37 TraesCS7B01G394400 chr1B 99.444 180 1 0 1054 1233 563993744 563993923 6.940000e-86 327.0
38 TraesCS7B01G394400 chr2B 99.444 180 0 1 1058 1236 719157221 719157042 2.500000e-85 326.0
39 TraesCS7B01G394400 chr1A 100.000 176 0 0 1058 1233 20177452 20177627 2.500000e-85 326.0
40 TraesCS7B01G394400 chr6B 98.352 182 2 1 1053 1233 603888149 603888330 4.180000e-83 318.0
41 TraesCS7B01G394400 chr5A 97.354 189 2 3 1055 1241 651552254 651552067 4.180000e-83 318.0
42 TraesCS7B01G394400 chr2A 98.876 178 1 1 1060 1236 252605924 252605747 1.500000e-82 316.0
43 TraesCS7B01G394400 chr2A 96.842 190 3 2 1057 1243 364400779 364400590 5.400000e-82 315.0
44 TraesCS7B01G394400 chr4D 92.500 40 3 0 548 587 346158322 346158361 1.000000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G394400 chr7B 661912110 661914709 2599 False 4802.000000 4802 100.000000 1 2600 1 chr7B.!!$F1 2599
1 TraesCS7B01G394400 chr7B 662651454 662651970 516 False 593.000000 593 87.763000 1234 1743 1 chr7B.!!$F2 509
2 TraesCS7B01G394400 chr7B 661716736 661717949 1213 False 460.500000 634 91.020500 1235 2037 2 chr7B.!!$F5 802
3 TraesCS7B01G394400 chr7B 662310561 662311737 1176 True 386.000000 682 85.970333 743 2115 3 chr7B.!!$R5 1372
4 TraesCS7B01G394400 chr7B 661998767 662001071 2304 False 358.750000 654 87.767750 761 2322 4 chr7B.!!$F6 1561
5 TraesCS7B01G394400 chr7D 588409045 588409805 760 False 489.500000 652 89.208500 743 1682 2 chr7D.!!$F4 939
6 TraesCS7B01G394400 chr7D 588470729 588472007 1278 True 388.666667 765 84.004000 761 2115 3 chr7D.!!$R2 1354
7 TraesCS7B01G394400 chr7A 680244345 680246079 1734 False 386.666667 610 86.495667 758 2361 3 chr7A.!!$F1 1603
8 TraesCS7B01G394400 chr3D 455037348 455041159 3811 True 480.000000 579 85.000000 1 1058 2 chr3D.!!$R1 1057

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
981 3778 0.038159 CACCTCACAAGTCTCCCGTC 60.038 60.0 0.0 0.0 0.0 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2370 6642 0.038251 ATGTCGCGCTCAGTCTGAAA 60.038 50.0 5.56 0.0 0.0 2.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 5.581126 TTTTAGGCCATAAATGTCTGCAG 57.419 39.130 7.63 7.63 33.40 4.41
72 74 3.238597 TCCCTTTTTGTGCCTAGCATTT 58.761 40.909 0.00 0.00 41.91 2.32
84 86 1.959282 CTAGCATTTGGGATGCCTTCC 59.041 52.381 4.35 0.00 45.59 3.46
102 104 2.034066 ATTGTGACCCTGTGCCGG 59.966 61.111 0.00 0.00 0.00 6.13
111 113 3.818787 CTGTGCCGGGCTGCAATC 61.819 66.667 21.46 4.52 44.11 2.67
115 117 3.908081 GCCGGGCTGCAATCATGG 61.908 66.667 12.87 0.00 0.00 3.66
117 119 2.831742 CGGGCTGCAATCATGGCT 60.832 61.111 0.50 0.00 0.00 4.75
128 130 3.887716 GCAATCATGGCTGGAGACTATTT 59.112 43.478 0.00 0.00 0.00 1.40
145 147 4.583073 ACTATTTGGCGGTGAGAAGTTTTT 59.417 37.500 0.00 0.00 0.00 1.94
155 157 0.521735 AGAAGTTTTTGATCGGGCGC 59.478 50.000 0.00 0.00 0.00 6.53
158 160 0.240945 AGTTTTTGATCGGGCGCTTG 59.759 50.000 7.64 0.00 0.00 4.01
186 188 1.064458 CGGTCGCGGTTTTGGTTTT 59.936 52.632 6.13 0.00 0.00 2.43
198 200 3.443588 GGTTTTTGACCGGCAGCT 58.556 55.556 0.00 0.00 39.00 4.24
199 201 2.636299 GGTTTTTGACCGGCAGCTA 58.364 52.632 0.00 0.00 39.00 3.32
200 202 0.521735 GGTTTTTGACCGGCAGCTAG 59.478 55.000 0.00 0.00 39.00 3.42
201 203 1.235724 GTTTTTGACCGGCAGCTAGT 58.764 50.000 0.00 0.00 0.00 2.57
202 204 1.069227 GTTTTTGACCGGCAGCTAGTG 60.069 52.381 0.00 0.00 0.00 2.74
225 227 4.497300 CTGCCCCAAATTTATCACTTGTG 58.503 43.478 0.00 0.00 0.00 3.33
279 281 6.642131 GCCTTGCATATATTGGTGTATTGTTG 59.358 38.462 0.00 0.00 0.00 3.33
282 284 9.454585 CTTGCATATATTGGTGTATTGTTGAAG 57.545 33.333 0.00 0.00 0.00 3.02
283 285 7.424803 TGCATATATTGGTGTATTGTTGAAGC 58.575 34.615 0.00 0.00 0.00 3.86
284 286 7.067981 TGCATATATTGGTGTATTGTTGAAGCA 59.932 33.333 0.00 0.00 0.00 3.91
285 287 8.084073 GCATATATTGGTGTATTGTTGAAGCAT 58.916 33.333 0.00 0.00 0.00 3.79
286 288 9.970395 CATATATTGGTGTATTGTTGAAGCATT 57.030 29.630 0.00 0.00 0.00 3.56
331 335 4.757019 ATTGTAATTGGATTGCCATGCA 57.243 36.364 0.00 0.00 45.46 3.96
432 436 3.784412 CCGACGCAACGCCGAAAT 61.784 61.111 0.00 0.00 0.00 2.17
444 448 1.969064 CCGAAATGGGTCCGCAACA 60.969 57.895 0.00 0.00 0.00 3.33
447 451 0.038618 GAAATGGGTCCGCAACAACC 60.039 55.000 0.00 0.00 34.64 3.77
457 461 3.047877 CAACAACCCGGACCTCGC 61.048 66.667 0.73 0.00 37.59 5.03
477 481 4.814294 CCACGTGGCCTCTACCGC 62.814 72.222 24.02 0.00 36.83 5.68
490 494 2.629050 CTACCGCTCCATCACCACCG 62.629 65.000 0.00 0.00 0.00 4.94
491 495 3.770040 CCGCTCCATCACCACCGA 61.770 66.667 0.00 0.00 0.00 4.69
492 496 2.501128 CGCTCCATCACCACCGAT 59.499 61.111 0.00 0.00 0.00 4.18
494 498 1.227674 GCTCCATCACCACCGATCC 60.228 63.158 0.00 0.00 0.00 3.36
495 499 1.068083 CTCCATCACCACCGATCCG 59.932 63.158 0.00 0.00 0.00 4.18
506 528 4.210537 CACCACCGATCCGTAAATTATGTC 59.789 45.833 0.00 0.00 0.00 3.06
511 533 4.927425 CCGATCCGTAAATTATGTCCGAAT 59.073 41.667 0.00 0.00 0.00 3.34
549 577 9.949174 TCATTGTGTTTGATATTTTATCCGATG 57.051 29.630 0.00 0.00 0.00 3.84
555 583 8.783093 TGTTTGATATTTTATCCGATGTCATCC 58.217 33.333 7.25 0.00 0.00 3.51
557 585 6.930731 TGATATTTTATCCGATGTCATCCGA 58.069 36.000 7.25 6.78 0.00 4.55
596 624 8.891671 ACTTTGAAATGTATGCTTTGAAATGT 57.108 26.923 0.00 0.00 0.00 2.71
601 629 7.220491 TGAAATGTATGCTTTGAAATGTATGCG 59.780 33.333 0.00 0.00 0.00 4.73
649 677 1.068474 CGTGGAATGGTCTCGTGTTC 58.932 55.000 0.00 0.00 0.00 3.18
651 679 2.338500 GTGGAATGGTCTCGTGTTCTC 58.662 52.381 0.00 0.00 0.00 2.87
653 681 1.630148 GAATGGTCTCGTGTTCTCGG 58.370 55.000 0.00 0.00 0.00 4.63
656 712 1.154263 GGTCTCGTGTTCTCGGACG 60.154 63.158 0.00 0.00 34.46 4.79
663 719 2.181021 GTTCTCGGACGGATGCGT 59.819 61.111 13.64 13.64 41.09 5.24
664 720 1.445582 GTTCTCGGACGGATGCGTT 60.446 57.895 15.15 0.00 41.09 4.84
673 729 1.060698 GACGGATGCGTTGTAGAAAGC 59.939 52.381 15.15 3.54 37.12 3.51
684 740 5.392595 GCGTTGTAGAAAGCCCAATTGATAA 60.393 40.000 7.12 0.00 31.03 1.75
687 743 7.432252 CGTTGTAGAAAGCCCAATTGATAATTC 59.568 37.037 7.12 6.47 0.00 2.17
688 744 7.346751 TGTAGAAAGCCCAATTGATAATTCC 57.653 36.000 7.12 0.00 0.00 3.01
696 3482 4.215399 CCCAATTGATAATTCCGTATGCGT 59.785 41.667 7.12 0.00 36.15 5.24
701 3487 0.924777 TAATTCCGTATGCGTGCGTG 59.075 50.000 15.34 7.06 36.15 5.34
723 3509 0.461961 CCGAGACCCATCTGTCTTCC 59.538 60.000 0.00 0.00 45.41 3.46
733 3519 0.039180 TCTGTCTTCCGCACTCCCTA 59.961 55.000 0.00 0.00 0.00 3.53
863 3654 4.082523 CCACCGATCCGTGGCACT 62.083 66.667 18.44 0.00 46.52 4.40
878 3670 0.678048 GCACTCACCCTCCACCAATC 60.678 60.000 0.00 0.00 0.00 2.67
879 3671 0.692476 CACTCACCCTCCACCAATCA 59.308 55.000 0.00 0.00 0.00 2.57
887 3679 0.617413 CTCCACCAATCACAGAGCCT 59.383 55.000 0.00 0.00 0.00 4.58
942 3736 1.152756 CCGATTCCCCACCAATCCC 60.153 63.158 0.00 0.00 0.00 3.85
971 3768 2.112297 GCGAACCCCACCTCACAA 59.888 61.111 0.00 0.00 0.00 3.33
972 3769 1.966451 GCGAACCCCACCTCACAAG 60.966 63.158 0.00 0.00 0.00 3.16
979 3776 1.293498 CCACCTCACAAGTCTCCCG 59.707 63.158 0.00 0.00 0.00 5.14
980 3777 1.472662 CCACCTCACAAGTCTCCCGT 61.473 60.000 0.00 0.00 0.00 5.28
981 3778 0.038159 CACCTCACAAGTCTCCCGTC 60.038 60.000 0.00 0.00 0.00 4.79
1059 3876 4.373116 GAGAAGACCACGGCGGCA 62.373 66.667 13.24 0.00 39.03 5.69
1060 3877 4.379243 AGAAGACCACGGCGGCAG 62.379 66.667 13.24 0.00 39.03 4.85
1061 3878 4.681978 GAAGACCACGGCGGCAGT 62.682 66.667 13.24 4.94 39.03 4.40
1062 3879 4.988598 AAGACCACGGCGGCAGTG 62.989 66.667 23.58 23.58 39.03 3.66
1081 3898 4.168291 CGGAGCTTCTCAGGGGCC 62.168 72.222 0.00 0.00 31.08 5.80
1082 3899 3.011517 GGAGCTTCTCAGGGGCCA 61.012 66.667 4.39 0.00 31.08 5.36
1083 3900 2.606587 GGAGCTTCTCAGGGGCCAA 61.607 63.158 4.39 0.00 31.08 4.52
1084 3901 1.377856 GAGCTTCTCAGGGGCCAAC 60.378 63.158 4.39 0.00 0.00 3.77
1085 3902 2.361737 GCTTCTCAGGGGCCAACC 60.362 66.667 4.39 0.00 39.11 3.77
1086 3903 2.911926 GCTTCTCAGGGGCCAACCT 61.912 63.158 4.39 0.00 43.08 3.50
1115 3932 4.813907 CCCCCAGCCCATGAATTT 57.186 55.556 0.00 0.00 0.00 1.82
1116 3933 3.010627 CCCCCAGCCCATGAATTTT 57.989 52.632 0.00 0.00 0.00 1.82
1117 3934 1.288188 CCCCCAGCCCATGAATTTTT 58.712 50.000 0.00 0.00 0.00 1.94
1144 3961 4.464652 AATACCCCTTAGTATTTGGCCC 57.535 45.455 0.00 0.00 39.38 5.80
1145 3962 1.688750 ACCCCTTAGTATTTGGCCCA 58.311 50.000 0.00 0.00 0.00 5.36
1146 3963 2.223174 ACCCCTTAGTATTTGGCCCAT 58.777 47.619 0.00 0.00 0.00 4.00
1147 3964 3.409159 ACCCCTTAGTATTTGGCCCATA 58.591 45.455 0.00 0.00 0.00 2.74
1148 3965 3.994384 ACCCCTTAGTATTTGGCCCATAT 59.006 43.478 0.00 0.00 0.00 1.78
1149 3966 4.044191 ACCCCTTAGTATTTGGCCCATATC 59.956 45.833 0.00 0.00 0.00 1.63
1150 3967 4.292306 CCCCTTAGTATTTGGCCCATATCT 59.708 45.833 0.00 0.00 0.00 1.98
1151 3968 5.501156 CCCTTAGTATTTGGCCCATATCTC 58.499 45.833 0.00 0.00 0.00 2.75
1152 3969 5.014123 CCCTTAGTATTTGGCCCATATCTCA 59.986 44.000 0.00 0.00 0.00 3.27
1153 3970 6.467194 CCCTTAGTATTTGGCCCATATCTCAA 60.467 42.308 0.00 0.00 0.00 3.02
1154 3971 6.656693 CCTTAGTATTTGGCCCATATCTCAAG 59.343 42.308 0.00 0.00 0.00 3.02
1155 3972 4.401925 AGTATTTGGCCCATATCTCAAGC 58.598 43.478 0.00 0.00 0.00 4.01
1156 3973 2.824689 TTTGGCCCATATCTCAAGCA 57.175 45.000 0.00 0.00 0.00 3.91
1157 3974 2.824689 TTGGCCCATATCTCAAGCAA 57.175 45.000 0.00 0.00 0.00 3.91
1158 3975 2.824689 TGGCCCATATCTCAAGCAAA 57.175 45.000 0.00 0.00 0.00 3.68
1159 3976 3.098774 TGGCCCATATCTCAAGCAAAA 57.901 42.857 0.00 0.00 0.00 2.44
1160 3977 3.645434 TGGCCCATATCTCAAGCAAAAT 58.355 40.909 0.00 0.00 0.00 1.82
1161 3978 3.638160 TGGCCCATATCTCAAGCAAAATC 59.362 43.478 0.00 0.00 0.00 2.17
1162 3979 3.638160 GGCCCATATCTCAAGCAAAATCA 59.362 43.478 0.00 0.00 0.00 2.57
1163 3980 4.261909 GGCCCATATCTCAAGCAAAATCAG 60.262 45.833 0.00 0.00 0.00 2.90
1164 3981 4.795308 GCCCATATCTCAAGCAAAATCAGC 60.795 45.833 0.00 0.00 0.00 4.26
1165 3982 4.261909 CCCATATCTCAAGCAAAATCAGCC 60.262 45.833 0.00 0.00 0.00 4.85
1166 3983 4.261909 CCATATCTCAAGCAAAATCAGCCC 60.262 45.833 0.00 0.00 0.00 5.19
1167 3984 2.291209 TCTCAAGCAAAATCAGCCCA 57.709 45.000 0.00 0.00 0.00 5.36
1168 3985 2.596346 TCTCAAGCAAAATCAGCCCAA 58.404 42.857 0.00 0.00 0.00 4.12
1169 3986 2.964464 TCTCAAGCAAAATCAGCCCAAA 59.036 40.909 0.00 0.00 0.00 3.28
1170 3987 3.387374 TCTCAAGCAAAATCAGCCCAAAA 59.613 39.130 0.00 0.00 0.00 2.44
1171 3988 4.040706 TCTCAAGCAAAATCAGCCCAAAAT 59.959 37.500 0.00 0.00 0.00 1.82
1172 3989 5.245751 TCTCAAGCAAAATCAGCCCAAAATA 59.754 36.000 0.00 0.00 0.00 1.40
1173 3990 5.237048 TCAAGCAAAATCAGCCCAAAATAC 58.763 37.500 0.00 0.00 0.00 1.89
1174 3991 4.888326 AGCAAAATCAGCCCAAAATACA 57.112 36.364 0.00 0.00 0.00 2.29
1175 3992 5.425196 AGCAAAATCAGCCCAAAATACAT 57.575 34.783 0.00 0.00 0.00 2.29
1176 3993 6.543430 AGCAAAATCAGCCCAAAATACATA 57.457 33.333 0.00 0.00 0.00 2.29
1177 3994 7.128234 AGCAAAATCAGCCCAAAATACATAT 57.872 32.000 0.00 0.00 0.00 1.78
1178 3995 7.567458 AGCAAAATCAGCCCAAAATACATATT 58.433 30.769 0.00 0.00 0.00 1.28
1179 3996 7.496591 AGCAAAATCAGCCCAAAATACATATTG 59.503 33.333 0.00 0.00 0.00 1.90
1180 3997 7.280652 GCAAAATCAGCCCAAAATACATATTGT 59.719 33.333 0.00 0.00 0.00 2.71
1181 3998 9.165035 CAAAATCAGCCCAAAATACATATTGTT 57.835 29.630 0.00 0.00 0.00 2.83
1182 3999 9.737844 AAAATCAGCCCAAAATACATATTGTTT 57.262 25.926 0.00 0.00 0.00 2.83
1183 4000 8.721019 AATCAGCCCAAAATACATATTGTTTG 57.279 30.769 0.00 0.00 0.00 2.93
1184 4001 6.105333 TCAGCCCAAAATACATATTGTTTGC 58.895 36.000 0.00 0.00 0.00 3.68
1185 4002 5.294060 CAGCCCAAAATACATATTGTTTGCC 59.706 40.000 0.00 0.00 0.00 4.52
1186 4003 4.574421 GCCCAAAATACATATTGTTTGCCC 59.426 41.667 0.00 0.00 0.00 5.36
1187 4004 5.122519 CCCAAAATACATATTGTTTGCCCC 58.877 41.667 0.00 0.00 0.00 5.80
1188 4005 5.122519 CCAAAATACATATTGTTTGCCCCC 58.877 41.667 0.00 0.00 0.00 5.40
1219 4036 2.632831 CCCCCTAGATTTCAGCCCA 58.367 57.895 0.00 0.00 0.00 5.36
1220 4037 0.926293 CCCCCTAGATTTCAGCCCAA 59.074 55.000 0.00 0.00 0.00 4.12
1221 4038 1.133668 CCCCCTAGATTTCAGCCCAAG 60.134 57.143 0.00 0.00 0.00 3.61
1222 4039 1.685148 CCCTAGATTTCAGCCCAAGC 58.315 55.000 0.00 0.00 40.32 4.01
1392 4209 1.006805 GGACATCGGCATCTCCTCG 60.007 63.158 0.00 0.00 0.00 4.63
1593 4410 1.502231 CTGTCACCAAGTTCACCTCG 58.498 55.000 0.00 0.00 0.00 4.63
1603 4420 4.202264 CCAAGTTCACCTCGGCTTAGATAT 60.202 45.833 0.00 0.00 0.00 1.63
1605 4422 5.615925 AGTTCACCTCGGCTTAGATATTT 57.384 39.130 0.00 0.00 0.00 1.40
1656 5318 3.701532 GCTCTGTAGCTGTAGGTAGTG 57.298 52.381 0.00 0.00 45.85 2.74
1691 5353 5.241403 TCATCTTGTAACTTGTGTGGGAT 57.759 39.130 0.00 0.00 0.00 3.85
1716 5390 5.526479 CACATACTGTTTCATGATCTGGAGG 59.474 44.000 0.00 0.00 0.00 4.30
1744 5418 7.986085 AGTAACAGTGCTGATTTATTCTGTT 57.014 32.000 6.17 11.88 44.51 3.16
1798 5927 0.750249 TCAGACAACGGCTCTGAACA 59.250 50.000 2.02 0.00 40.98 3.18
1875 6004 4.637771 GCTAGTGGCCGTTTGGAT 57.362 55.556 0.00 0.00 37.49 3.41
1876 6005 2.868253 GCTAGTGGCCGTTTGGATT 58.132 52.632 0.00 0.00 37.49 3.01
1878 6007 0.451783 CTAGTGGCCGTTTGGATTGC 59.548 55.000 0.00 0.00 37.49 3.56
1904 6043 0.171903 GTACATGTACAGGGCGACGT 59.828 55.000 27.37 0.00 36.15 4.34
1984 6152 9.793259 TTCTTCAGACATAAATTTAGGTTCACT 57.207 29.630 15.98 6.87 0.00 3.41
1990 6158 8.606830 AGACATAAATTTAGGTTCACTTCCTCT 58.393 33.333 15.98 3.65 36.60 3.69
2053 6307 6.095300 CAGGATGCACCATCTTGTAATTTGTA 59.905 38.462 8.61 0.00 41.16 2.41
2075 6331 2.755103 GGGACACAATGTTTCAGGATCC 59.245 50.000 2.48 2.48 0.00 3.36
2080 6336 2.571653 ACAATGTTTCAGGATCCGGAGA 59.428 45.455 14.51 7.88 0.00 3.71
2082 6338 3.550437 ATGTTTCAGGATCCGGAGAAG 57.450 47.619 14.51 0.00 0.00 2.85
2083 6339 1.066143 TGTTTCAGGATCCGGAGAAGC 60.066 52.381 14.51 16.59 0.00 3.86
2116 6373 4.430137 TGCTTTGATCTGTTTCATGCTC 57.570 40.909 0.00 0.00 0.00 4.26
2117 6374 3.822167 TGCTTTGATCTGTTTCATGCTCA 59.178 39.130 0.00 0.00 0.00 4.26
2118 6375 4.278919 TGCTTTGATCTGTTTCATGCTCAA 59.721 37.500 0.00 0.00 0.00 3.02
2119 6376 5.047590 TGCTTTGATCTGTTTCATGCTCAAT 60.048 36.000 0.00 0.00 0.00 2.57
2120 6377 5.515626 GCTTTGATCTGTTTCATGCTCAATC 59.484 40.000 0.00 0.00 0.00 2.67
2121 6378 5.571784 TTGATCTGTTTCATGCTCAATCC 57.428 39.130 0.00 0.00 0.00 3.01
2122 6379 4.851843 TGATCTGTTTCATGCTCAATCCT 58.148 39.130 0.00 0.00 0.00 3.24
2124 6381 6.417258 TGATCTGTTTCATGCTCAATCCTTA 58.583 36.000 0.00 0.00 0.00 2.69
2125 6382 6.317140 TGATCTGTTTCATGCTCAATCCTTAC 59.683 38.462 0.00 0.00 0.00 2.34
2126 6383 4.943705 TCTGTTTCATGCTCAATCCTTACC 59.056 41.667 0.00 0.00 0.00 2.85
2127 6384 4.661222 TGTTTCATGCTCAATCCTTACCA 58.339 39.130 0.00 0.00 0.00 3.25
2132 6404 5.311265 TCATGCTCAATCCTTACCATGATC 58.689 41.667 0.00 0.00 35.50 2.92
2133 6405 3.732212 TGCTCAATCCTTACCATGATCG 58.268 45.455 0.00 0.00 0.00 3.69
2136 6408 4.310769 CTCAATCCTTACCATGATCGTCC 58.689 47.826 0.00 0.00 0.00 4.79
2144 6416 1.839994 ACCATGATCGTCCCTGTTGAT 59.160 47.619 0.00 0.00 0.00 2.57
2208 6480 2.672961 GTGCATACCACTGTAGCTGA 57.327 50.000 0.00 0.00 41.35 4.26
2214 6486 2.772739 CCACTGTAGCTGATGTGGC 58.227 57.895 16.87 0.00 42.55 5.01
2218 6490 1.142185 CTGTAGCTGATGTGGCGACG 61.142 60.000 0.00 0.00 37.96 5.12
2219 6491 2.202743 TAGCTGATGTGGCGACGC 60.203 61.111 12.43 12.43 42.66 5.19
2255 6527 6.484288 AGTTCATATGTTCAGGAAATCCACA 58.516 36.000 1.90 0.00 38.89 4.17
2261 6533 4.141287 TGTTCAGGAAATCCACAACGAAT 58.859 39.130 1.67 0.00 38.89 3.34
2279 6551 5.060506 ACGAATAGTTCAATTGTCCACACA 58.939 37.500 5.13 0.00 0.00 3.72
2280 6552 5.705441 ACGAATAGTTCAATTGTCCACACAT 59.295 36.000 5.13 0.00 30.55 3.21
2283 6555 8.397906 CGAATAGTTCAATTGTCCACACATATT 58.602 33.333 5.13 2.72 30.55 1.28
2295 6567 6.828273 TGTCCACACATATTATGAGGGAAAAG 59.172 38.462 10.62 0.00 32.41 2.27
2299 6571 6.488006 CACACATATTATGAGGGAAAAGAGGG 59.512 42.308 10.62 0.00 0.00 4.30
2310 6582 2.556622 GGAAAAGAGGGCGTTTCAATCA 59.443 45.455 0.00 0.00 42.07 2.57
2313 6585 0.984230 AGAGGGCGTTTCAATCAGGA 59.016 50.000 0.00 0.00 0.00 3.86
2318 6590 3.078837 GGGCGTTTCAATCAGGACTTAA 58.921 45.455 0.00 0.00 0.00 1.85
2329 6601 6.156949 TCAATCAGGACTTAAGCTACATTCCT 59.843 38.462 1.29 3.28 33.58 3.36
2361 6633 0.925466 CTGTTGTTGCAGCACAAAGC 59.075 50.000 1.37 0.00 40.82 3.51
2375 6647 5.486095 GCACAAAGCGTCTAATTTTTCAG 57.514 39.130 0.00 0.00 0.00 3.02
2376 6648 5.212194 GCACAAAGCGTCTAATTTTTCAGA 58.788 37.500 0.00 0.00 0.00 3.27
2377 6649 5.115622 GCACAAAGCGTCTAATTTTTCAGAC 59.884 40.000 0.00 0.00 38.24 3.51
2378 6650 6.430451 CACAAAGCGTCTAATTTTTCAGACT 58.570 36.000 4.93 0.00 39.23 3.24
2379 6651 6.358030 CACAAAGCGTCTAATTTTTCAGACTG 59.642 38.462 0.00 0.00 39.23 3.51
2380 6652 6.260050 ACAAAGCGTCTAATTTTTCAGACTGA 59.740 34.615 0.00 0.00 39.23 3.41
2381 6653 6.473397 AAGCGTCTAATTTTTCAGACTGAG 57.527 37.500 5.10 0.00 39.23 3.35
2382 6654 4.390297 AGCGTCTAATTTTTCAGACTGAGC 59.610 41.667 5.10 1.81 39.23 4.26
2383 6655 4.722346 GCGTCTAATTTTTCAGACTGAGCG 60.722 45.833 5.10 2.59 39.23 5.03
2384 6656 4.642953 GTCTAATTTTTCAGACTGAGCGC 58.357 43.478 5.10 0.00 38.50 5.92
2385 6657 2.601481 AATTTTTCAGACTGAGCGCG 57.399 45.000 0.00 0.00 0.00 6.86
2386 6658 1.795768 ATTTTTCAGACTGAGCGCGA 58.204 45.000 12.10 0.00 0.00 5.87
2387 6659 0.859232 TTTTTCAGACTGAGCGCGAC 59.141 50.000 12.10 2.99 0.00 5.19
2388 6660 0.249280 TTTTCAGACTGAGCGCGACA 60.249 50.000 12.10 8.43 0.00 4.35
2389 6661 0.038251 TTTCAGACTGAGCGCGACAT 60.038 50.000 12.10 0.00 0.00 3.06
2390 6662 0.733909 TTCAGACTGAGCGCGACATG 60.734 55.000 12.10 4.92 0.00 3.21
2391 6663 2.163390 CAGACTGAGCGCGACATGG 61.163 63.158 12.10 0.71 0.00 3.66
2392 6664 2.887568 GACTGAGCGCGACATGGG 60.888 66.667 12.10 0.00 0.00 4.00
2393 6665 3.649277 GACTGAGCGCGACATGGGT 62.649 63.158 12.10 3.49 0.00 4.51
2394 6666 2.887568 CTGAGCGCGACATGGGTC 60.888 66.667 12.10 0.00 40.77 4.46
2395 6667 3.362399 CTGAGCGCGACATGGGTCT 62.362 63.158 12.10 0.00 42.05 3.85
2396 6668 2.887568 GAGCGCGACATGGGTCTG 60.888 66.667 12.10 0.00 42.05 3.51
2397 6669 4.457496 AGCGCGACATGGGTCTGG 62.457 66.667 12.10 0.00 42.05 3.86
2398 6670 4.451150 GCGCGACATGGGTCTGGA 62.451 66.667 12.10 0.00 42.05 3.86
2399 6671 2.264480 CGCGACATGGGTCTGGAA 59.736 61.111 0.00 0.00 42.05 3.53
2400 6672 2.100631 CGCGACATGGGTCTGGAAC 61.101 63.158 0.00 0.00 42.05 3.62
2401 6673 1.296715 GCGACATGGGTCTGGAACT 59.703 57.895 0.00 0.00 42.05 3.01
2402 6674 1.021390 GCGACATGGGTCTGGAACTG 61.021 60.000 0.00 0.00 42.05 3.16
2403 6675 0.321671 CGACATGGGTCTGGAACTGT 59.678 55.000 0.00 0.00 42.05 3.55
2404 6676 1.270839 CGACATGGGTCTGGAACTGTT 60.271 52.381 0.00 0.00 42.05 3.16
2405 6677 2.810400 CGACATGGGTCTGGAACTGTTT 60.810 50.000 0.00 0.00 42.05 2.83
2406 6678 3.556213 CGACATGGGTCTGGAACTGTTTA 60.556 47.826 0.00 0.00 42.05 2.01
2407 6679 4.003648 GACATGGGTCTGGAACTGTTTAG 58.996 47.826 0.00 0.00 40.99 1.85
2408 6680 3.244911 ACATGGGTCTGGAACTGTTTAGG 60.245 47.826 0.00 0.00 0.00 2.69
2409 6681 1.073284 TGGGTCTGGAACTGTTTAGGC 59.927 52.381 0.00 0.00 0.00 3.93
2410 6682 1.073284 GGGTCTGGAACTGTTTAGGCA 59.927 52.381 10.90 0.00 0.00 4.75
2411 6683 2.488347 GGGTCTGGAACTGTTTAGGCAA 60.488 50.000 10.90 0.00 0.00 4.52
2412 6684 2.814336 GGTCTGGAACTGTTTAGGCAAG 59.186 50.000 10.90 0.00 0.00 4.01
2413 6685 3.477530 GTCTGGAACTGTTTAGGCAAGT 58.522 45.455 0.00 0.00 0.00 3.16
2414 6686 3.251004 GTCTGGAACTGTTTAGGCAAGTG 59.749 47.826 0.00 0.00 0.00 3.16
2415 6687 3.135712 TCTGGAACTGTTTAGGCAAGTGA 59.864 43.478 0.00 0.00 0.00 3.41
2416 6688 4.074970 CTGGAACTGTTTAGGCAAGTGAT 58.925 43.478 0.00 0.00 0.00 3.06
2417 6689 4.469657 TGGAACTGTTTAGGCAAGTGATT 58.530 39.130 0.00 0.00 0.00 2.57
2418 6690 4.892934 TGGAACTGTTTAGGCAAGTGATTT 59.107 37.500 0.00 0.00 0.00 2.17
2419 6691 5.362430 TGGAACTGTTTAGGCAAGTGATTTT 59.638 36.000 0.00 0.00 0.00 1.82
2420 6692 6.547880 TGGAACTGTTTAGGCAAGTGATTTTA 59.452 34.615 0.00 0.00 0.00 1.52
2421 6693 6.861572 GGAACTGTTTAGGCAAGTGATTTTAC 59.138 38.462 0.00 0.00 0.00 2.01
2422 6694 6.327279 ACTGTTTAGGCAAGTGATTTTACC 57.673 37.500 0.00 0.00 0.00 2.85
2423 6695 6.068670 ACTGTTTAGGCAAGTGATTTTACCT 58.931 36.000 0.00 0.00 0.00 3.08
2424 6696 6.206829 ACTGTTTAGGCAAGTGATTTTACCTC 59.793 38.462 0.00 0.00 0.00 3.85
2425 6697 5.475564 TGTTTAGGCAAGTGATTTTACCTCC 59.524 40.000 0.00 0.00 0.00 4.30
2426 6698 2.711542 AGGCAAGTGATTTTACCTCCG 58.288 47.619 0.00 0.00 0.00 4.63
2427 6699 1.132453 GGCAAGTGATTTTACCTCCGC 59.868 52.381 0.00 0.00 0.00 5.54
2428 6700 1.810151 GCAAGTGATTTTACCTCCGCA 59.190 47.619 0.00 0.00 0.00 5.69
2429 6701 2.227865 GCAAGTGATTTTACCTCCGCAA 59.772 45.455 0.00 0.00 0.00 4.85
2430 6702 3.670627 GCAAGTGATTTTACCTCCGCAAG 60.671 47.826 0.00 0.00 0.00 4.01
2431 6703 2.084546 AGTGATTTTACCTCCGCAAGC 58.915 47.619 0.00 0.00 0.00 4.01
2432 6704 1.083489 TGATTTTACCTCCGCAAGCG 58.917 50.000 7.60 7.60 39.44 4.68
2442 6714 4.101790 CGCAAGCGGCCGTGATTT 62.102 61.111 28.70 13.41 40.31 2.17
2443 6715 2.202479 GCAAGCGGCCGTGATTTC 60.202 61.111 28.70 8.76 36.11 2.17
2444 6716 2.976840 GCAAGCGGCCGTGATTTCA 61.977 57.895 28.70 0.00 36.11 2.69
2445 6717 1.135315 CAAGCGGCCGTGATTTCAG 59.865 57.895 28.70 4.57 0.00 3.02
2446 6718 1.003839 AAGCGGCCGTGATTTCAGA 60.004 52.632 28.70 0.00 0.00 3.27
2447 6719 1.298859 AAGCGGCCGTGATTTCAGAC 61.299 55.000 28.70 5.38 0.00 3.51
2448 6720 1.741770 GCGGCCGTGATTTCAGACT 60.742 57.895 28.70 0.00 0.00 3.24
2449 6721 1.970917 GCGGCCGTGATTTCAGACTG 61.971 60.000 28.70 0.00 0.00 3.51
2450 6722 0.389817 CGGCCGTGATTTCAGACTGA 60.390 55.000 19.50 0.00 0.00 3.41
2451 6723 1.079503 GGCCGTGATTTCAGACTGAC 58.920 55.000 4.15 0.00 0.00 3.51
2452 6724 1.608025 GGCCGTGATTTCAGACTGACA 60.608 52.381 4.15 0.00 0.00 3.58
2453 6725 1.461127 GCCGTGATTTCAGACTGACAC 59.539 52.381 4.15 9.41 0.00 3.67
2454 6726 1.721389 CCGTGATTTCAGACTGACACG 59.279 52.381 27.46 27.46 41.22 4.49
2455 6727 2.607038 CCGTGATTTCAGACTGACACGA 60.607 50.000 32.26 9.08 42.92 4.35
2456 6728 3.245797 CGTGATTTCAGACTGACACGAT 58.754 45.455 29.20 13.01 42.92 3.73
2457 6729 3.675225 CGTGATTTCAGACTGACACGATT 59.325 43.478 29.20 5.41 42.92 3.34
2458 6730 4.150627 CGTGATTTCAGACTGACACGATTT 59.849 41.667 29.20 2.01 42.92 2.17
2459 6731 5.333339 CGTGATTTCAGACTGACACGATTTT 60.333 40.000 29.20 1.36 42.92 1.82
2460 6732 6.074005 GTGATTTCAGACTGACACGATTTTC 58.926 40.000 4.15 0.00 0.00 2.29
2461 6733 5.757808 TGATTTCAGACTGACACGATTTTCA 59.242 36.000 4.15 0.00 0.00 2.69
2462 6734 5.657470 TTTCAGACTGACACGATTTTCAG 57.343 39.130 4.15 0.00 44.19 3.02
2471 6743 6.984740 TGACACGATTTTCAGTAATTTTGC 57.015 33.333 0.00 0.00 0.00 3.68
2472 6744 6.499172 TGACACGATTTTCAGTAATTTTGCA 58.501 32.000 0.00 0.00 0.00 4.08
2473 6745 6.416455 TGACACGATTTTCAGTAATTTTGCAC 59.584 34.615 0.00 0.00 0.00 4.57
2474 6746 6.503524 ACACGATTTTCAGTAATTTTGCACT 58.496 32.000 0.00 0.00 0.00 4.40
2475 6747 6.417635 ACACGATTTTCAGTAATTTTGCACTG 59.582 34.615 0.00 0.41 42.88 3.66
2476 6748 5.402270 ACGATTTTCAGTAATTTTGCACTGC 59.598 36.000 1.83 0.00 41.58 4.40
2477 6749 5.401972 CGATTTTCAGTAATTTTGCACTGCA 59.598 36.000 0.00 0.00 41.58 4.41
2489 6761 4.888038 TTGCACTGCAATATAGCTCAAG 57.112 40.909 12.59 0.00 43.99 3.02
2490 6762 4.141233 TGCACTGCAATATAGCTCAAGA 57.859 40.909 0.00 0.00 34.76 3.02
2491 6763 3.873361 TGCACTGCAATATAGCTCAAGAC 59.127 43.478 0.00 0.00 34.76 3.01
2492 6764 3.873361 GCACTGCAATATAGCTCAAGACA 59.127 43.478 0.00 0.00 34.99 3.41
2493 6765 4.025061 GCACTGCAATATAGCTCAAGACAG 60.025 45.833 0.00 0.00 34.99 3.51
2494 6766 5.354767 CACTGCAATATAGCTCAAGACAGA 58.645 41.667 0.00 0.00 34.99 3.41
2495 6767 5.233902 CACTGCAATATAGCTCAAGACAGAC 59.766 44.000 0.00 0.00 34.99 3.51
2496 6768 4.363138 TGCAATATAGCTCAAGACAGACG 58.637 43.478 0.00 0.00 34.99 4.18
2497 6769 3.183373 GCAATATAGCTCAAGACAGACGC 59.817 47.826 0.00 0.00 0.00 5.19
2498 6770 2.757686 TATAGCTCAAGACAGACGCG 57.242 50.000 3.53 3.53 0.00 6.01
2499 6771 0.526524 ATAGCTCAAGACAGACGCGC 60.527 55.000 5.73 0.00 0.00 6.86
2500 6772 2.543687 TAGCTCAAGACAGACGCGCC 62.544 60.000 5.73 0.00 0.00 6.53
2501 6773 2.811317 CTCAAGACAGACGCGCCC 60.811 66.667 5.73 0.00 0.00 6.13
2502 6774 4.373116 TCAAGACAGACGCGCCCC 62.373 66.667 5.73 0.00 0.00 5.80
2514 6786 4.038080 CGCCCCGGTTTTCAGCAC 62.038 66.667 0.00 0.00 0.00 4.40
2515 6787 2.597510 GCCCCGGTTTTCAGCACT 60.598 61.111 0.00 0.00 0.00 4.40
2516 6788 2.200337 GCCCCGGTTTTCAGCACTT 61.200 57.895 0.00 0.00 0.00 3.16
2517 6789 1.956802 CCCCGGTTTTCAGCACTTC 59.043 57.895 0.00 0.00 0.00 3.01
2518 6790 0.537371 CCCCGGTTTTCAGCACTTCT 60.537 55.000 0.00 0.00 0.00 2.85
2519 6791 0.875059 CCCGGTTTTCAGCACTTCTC 59.125 55.000 0.00 0.00 0.00 2.87
2520 6792 0.875059 CCGGTTTTCAGCACTTCTCC 59.125 55.000 0.00 0.00 0.00 3.71
2521 6793 1.593196 CGGTTTTCAGCACTTCTCCA 58.407 50.000 0.00 0.00 0.00 3.86
2522 6794 1.264288 CGGTTTTCAGCACTTCTCCAC 59.736 52.381 0.00 0.00 0.00 4.02
2523 6795 2.576615 GGTTTTCAGCACTTCTCCACT 58.423 47.619 0.00 0.00 0.00 4.00
2524 6796 2.291741 GGTTTTCAGCACTTCTCCACTG 59.708 50.000 0.00 0.00 0.00 3.66
2525 6797 1.597742 TTTCAGCACTTCTCCACTGC 58.402 50.000 0.00 0.00 0.00 4.40
2526 6798 0.469494 TTCAGCACTTCTCCACTGCA 59.531 50.000 0.00 0.00 33.06 4.41
2527 6799 0.469494 TCAGCACTTCTCCACTGCAA 59.531 50.000 0.00 0.00 33.06 4.08
2528 6800 1.072806 TCAGCACTTCTCCACTGCAAT 59.927 47.619 0.00 0.00 33.06 3.56
2529 6801 2.302733 TCAGCACTTCTCCACTGCAATA 59.697 45.455 0.00 0.00 33.06 1.90
2530 6802 3.054875 TCAGCACTTCTCCACTGCAATAT 60.055 43.478 0.00 0.00 33.06 1.28
2531 6803 4.162131 TCAGCACTTCTCCACTGCAATATA 59.838 41.667 0.00 0.00 33.06 0.86
2532 6804 4.510711 CAGCACTTCTCCACTGCAATATAG 59.489 45.833 0.00 0.00 33.06 1.31
2533 6805 3.249559 GCACTTCTCCACTGCAATATAGC 59.750 47.826 0.00 0.00 0.00 2.97
2534 6806 4.701765 CACTTCTCCACTGCAATATAGCT 58.298 43.478 0.00 0.00 34.99 3.32
2535 6807 4.510711 CACTTCTCCACTGCAATATAGCTG 59.489 45.833 0.00 0.00 39.11 4.24
2536 6808 3.117491 TCTCCACTGCAATATAGCTGC 57.883 47.619 0.00 0.00 40.35 5.25
2537 6809 2.702478 TCTCCACTGCAATATAGCTGCT 59.298 45.455 7.57 7.57 40.59 4.24
2538 6810 3.065655 CTCCACTGCAATATAGCTGCTC 58.934 50.000 4.91 0.00 40.59 4.26
2539 6811 2.702478 TCCACTGCAATATAGCTGCTCT 59.298 45.455 4.91 0.00 40.59 4.09
2540 6812 3.135348 TCCACTGCAATATAGCTGCTCTT 59.865 43.478 4.91 0.00 40.59 2.85
2541 6813 3.250280 CCACTGCAATATAGCTGCTCTTG 59.750 47.826 4.91 10.05 40.59 3.02
2542 6814 3.875727 CACTGCAATATAGCTGCTCTTGT 59.124 43.478 4.91 0.00 40.59 3.16
2543 6815 3.875727 ACTGCAATATAGCTGCTCTTGTG 59.124 43.478 4.91 2.08 40.59 3.33
2544 6816 2.615447 TGCAATATAGCTGCTCTTGTGC 59.385 45.455 4.91 12.89 40.59 4.57
2545 6817 2.615447 GCAATATAGCTGCTCTTGTGCA 59.385 45.455 4.91 0.00 41.05 4.57
2546 6818 3.065786 GCAATATAGCTGCTCTTGTGCAA 59.934 43.478 4.91 0.00 42.83 4.08
2547 6819 4.595116 CAATATAGCTGCTCTTGTGCAAC 58.405 43.478 4.91 0.00 42.83 4.17
2548 6820 7.383629 GCAATATAGCTGCTCTTGTGCAACA 62.384 44.000 4.91 0.00 42.83 3.33
2558 6830 1.951510 TGTGCAACAGCTAAGCAGC 59.048 52.632 7.10 0.00 45.67 5.25
2568 6840 2.663826 GCTAAGCAGCTACAGTCACT 57.336 50.000 0.00 0.00 44.93 3.41
2569 6841 2.535331 GCTAAGCAGCTACAGTCACTC 58.465 52.381 0.00 0.00 44.93 3.51
2570 6842 2.737039 GCTAAGCAGCTACAGTCACTCC 60.737 54.545 0.00 0.00 44.93 3.85
2571 6843 1.342074 AAGCAGCTACAGTCACTCCA 58.658 50.000 0.00 0.00 0.00 3.86
2572 6844 0.894141 AGCAGCTACAGTCACTCCAG 59.106 55.000 0.00 0.00 0.00 3.86
2573 6845 0.108424 GCAGCTACAGTCACTCCAGG 60.108 60.000 0.00 0.00 0.00 4.45
2574 6846 1.550327 CAGCTACAGTCACTCCAGGA 58.450 55.000 0.00 0.00 0.00 3.86
2575 6847 2.106566 CAGCTACAGTCACTCCAGGAT 58.893 52.381 0.00 0.00 0.00 3.24
2576 6848 3.291584 CAGCTACAGTCACTCCAGGATA 58.708 50.000 0.00 0.00 0.00 2.59
2577 6849 3.317711 CAGCTACAGTCACTCCAGGATAG 59.682 52.174 0.00 0.00 0.00 2.08
2578 6850 3.053245 AGCTACAGTCACTCCAGGATAGT 60.053 47.826 0.00 0.00 0.00 2.12
2579 6851 4.166337 AGCTACAGTCACTCCAGGATAGTA 59.834 45.833 0.00 0.00 0.00 1.82
2580 6852 5.074115 GCTACAGTCACTCCAGGATAGTAT 58.926 45.833 0.00 0.00 0.00 2.12
2581 6853 5.536916 GCTACAGTCACTCCAGGATAGTATT 59.463 44.000 0.00 0.00 0.00 1.89
2582 6854 6.041069 GCTACAGTCACTCCAGGATAGTATTT 59.959 42.308 0.00 0.00 0.00 1.40
2583 6855 6.875972 ACAGTCACTCCAGGATAGTATTTT 57.124 37.500 0.00 0.00 0.00 1.82
2584 6856 7.259088 ACAGTCACTCCAGGATAGTATTTTT 57.741 36.000 0.00 0.00 0.00 1.94
2585 6857 7.331791 ACAGTCACTCCAGGATAGTATTTTTC 58.668 38.462 0.00 0.00 0.00 2.29
2586 6858 6.763610 CAGTCACTCCAGGATAGTATTTTTCC 59.236 42.308 0.00 0.00 0.00 3.13
2587 6859 6.443849 AGTCACTCCAGGATAGTATTTTTCCA 59.556 38.462 0.00 0.00 31.65 3.53
2588 6860 6.539103 GTCACTCCAGGATAGTATTTTTCCAC 59.461 42.308 0.00 0.00 31.65 4.02
2589 6861 5.523916 CACTCCAGGATAGTATTTTTCCACG 59.476 44.000 0.00 0.00 31.65 4.94
2590 6862 5.424252 ACTCCAGGATAGTATTTTTCCACGA 59.576 40.000 0.00 0.00 31.65 4.35
2591 6863 6.099845 ACTCCAGGATAGTATTTTTCCACGAT 59.900 38.462 0.00 0.00 31.65 3.73
2592 6864 6.522054 TCCAGGATAGTATTTTTCCACGATC 58.478 40.000 0.00 0.00 31.65 3.69
2593 6865 5.701290 CCAGGATAGTATTTTTCCACGATCC 59.299 44.000 5.92 5.92 35.52 3.36
2594 6866 5.701290 CAGGATAGTATTTTTCCACGATCCC 59.299 44.000 9.38 0.00 35.77 3.85
2595 6867 4.689345 GGATAGTATTTTTCCACGATCCCG 59.311 45.833 0.00 0.00 42.50 5.14
2596 6868 3.899052 AGTATTTTTCCACGATCCCGA 57.101 42.857 0.00 0.00 39.50 5.14
2597 6869 4.210724 AGTATTTTTCCACGATCCCGAA 57.789 40.909 0.00 0.00 39.50 4.30
2598 6870 4.581868 AGTATTTTTCCACGATCCCGAAA 58.418 39.130 0.00 0.00 39.50 3.46
2599 6871 4.634443 AGTATTTTTCCACGATCCCGAAAG 59.366 41.667 0.00 0.00 39.50 2.62
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 4.454728 TTTTCTGCAGACATTTATGGCC 57.545 40.909 18.03 0.00 36.08 5.36
84 86 2.334946 CCGGCACAGGGTCACAATG 61.335 63.158 0.00 0.00 0.00 2.82
102 104 1.735376 CTCCAGCCATGATTGCAGCC 61.735 60.000 0.00 0.00 0.00 4.85
107 109 4.277672 CCAAATAGTCTCCAGCCATGATTG 59.722 45.833 0.00 0.00 0.00 2.67
111 113 1.952296 GCCAAATAGTCTCCAGCCATG 59.048 52.381 0.00 0.00 0.00 3.66
115 117 0.107654 ACCGCCAAATAGTCTCCAGC 60.108 55.000 0.00 0.00 0.00 4.85
117 119 1.207089 CTCACCGCCAAATAGTCTCCA 59.793 52.381 0.00 0.00 0.00 3.86
128 130 2.045561 TCAAAAACTTCTCACCGCCA 57.954 45.000 0.00 0.00 0.00 5.69
155 157 4.038080 GACCGCGCAAACCCCAAG 62.038 66.667 8.75 0.00 0.00 3.61
186 188 2.047274 GCACTAGCTGCCGGTCAA 60.047 61.111 1.90 0.00 40.42 3.18
198 200 3.699038 GTGATAAATTTGGGGCAGCACTA 59.301 43.478 0.00 0.00 0.00 2.74
199 201 2.497273 GTGATAAATTTGGGGCAGCACT 59.503 45.455 0.00 0.00 0.00 4.40
200 202 2.497273 AGTGATAAATTTGGGGCAGCAC 59.503 45.455 0.00 0.00 0.00 4.40
201 203 2.818921 AGTGATAAATTTGGGGCAGCA 58.181 42.857 0.00 0.00 0.00 4.41
202 204 3.055891 ACAAGTGATAAATTTGGGGCAGC 60.056 43.478 0.00 0.00 30.00 5.25
203 205 4.497300 CACAAGTGATAAATTTGGGGCAG 58.503 43.478 0.00 0.00 30.00 4.85
204 206 3.260380 CCACAAGTGATAAATTTGGGGCA 59.740 43.478 0.00 0.00 41.65 5.36
205 207 3.513515 TCCACAAGTGATAAATTTGGGGC 59.486 43.478 0.00 0.00 46.26 5.80
250 252 5.458041 ACACCAATATATGCAAGGCAATC 57.542 39.130 0.00 0.00 43.62 2.67
257 259 7.920151 GCTTCAACAATACACCAATATATGCAA 59.080 33.333 0.00 0.00 0.00 4.08
331 335 3.574614 GCACGCTCCACACAATAAAAAT 58.425 40.909 0.00 0.00 0.00 1.82
368 372 3.384927 GTGCGCATGTCGTACCTC 58.615 61.111 15.91 0.00 45.99 3.85
403 407 2.431942 CGTCGGACTTGGGGAACG 60.432 66.667 6.57 0.00 0.00 3.95
408 412 3.411351 CGTTGCGTCGGACTTGGG 61.411 66.667 6.57 0.00 0.00 4.12
409 413 4.072088 GCGTTGCGTCGGACTTGG 62.072 66.667 6.57 0.00 0.00 3.61
429 433 2.046108 GGTTGTTGCGGACCCATTT 58.954 52.632 0.00 0.00 0.00 2.32
462 466 3.450115 GAGCGGTAGAGGCCACGT 61.450 66.667 5.01 0.00 0.00 4.49
477 481 1.068083 CGGATCGGTGGTGATGGAG 59.932 63.158 0.00 0.00 0.00 3.86
523 545 9.949174 CATCGGATAAAATATCAAACACAATGA 57.051 29.630 0.00 0.00 0.00 2.57
544 572 8.721478 AGATTTAAAATAATCGGATGACATCGG 58.279 33.333 15.05 15.05 39.09 4.18
577 605 7.257003 TCGCATACATTTCAAAGCATACATTT 58.743 30.769 0.00 0.00 0.00 2.32
578 606 6.794374 TCGCATACATTTCAAAGCATACATT 58.206 32.000 0.00 0.00 0.00 2.71
579 607 6.375945 TCGCATACATTTCAAAGCATACAT 57.624 33.333 0.00 0.00 0.00 2.29
580 608 5.809719 TCGCATACATTTCAAAGCATACA 57.190 34.783 0.00 0.00 0.00 2.29
581 609 6.521133 GCTATCGCATACATTTCAAAGCATAC 59.479 38.462 0.00 0.00 35.78 2.39
582 610 6.204495 TGCTATCGCATACATTTCAAAGCATA 59.796 34.615 0.00 0.00 42.25 3.14
583 611 5.008911 TGCTATCGCATACATTTCAAAGCAT 59.991 36.000 0.00 0.00 42.25 3.79
584 612 4.335037 TGCTATCGCATACATTTCAAAGCA 59.665 37.500 0.00 0.00 42.25 3.91
585 613 4.847633 TGCTATCGCATACATTTCAAAGC 58.152 39.130 0.00 0.00 42.25 3.51
601 629 0.950116 GCCTGCCATTCAGTGCTATC 59.050 55.000 0.00 0.00 41.25 2.08
606 634 2.882876 GCAGCCTGCCATTCAGTG 59.117 61.111 5.06 0.00 41.25 3.66
622 650 3.124921 CCATTCCACGGACACGGC 61.125 66.667 0.00 0.00 46.48 5.68
623 651 1.740296 GACCATTCCACGGACACGG 60.740 63.158 0.00 0.00 46.48 4.94
632 660 1.067846 CGAGAACACGAGACCATTCCA 60.068 52.381 0.00 0.00 35.09 3.53
633 661 1.630148 CGAGAACACGAGACCATTCC 58.370 55.000 0.00 0.00 35.09 3.01
656 712 0.733150 GGGCTTTCTACAACGCATCC 59.267 55.000 0.00 0.00 0.00 3.51
663 719 7.416213 CGGAATTATCAATTGGGCTTTCTACAA 60.416 37.037 5.42 0.00 0.00 2.41
664 720 6.039270 CGGAATTATCAATTGGGCTTTCTACA 59.961 38.462 5.42 0.00 0.00 2.74
673 729 4.215399 ACGCATACGGAATTATCAATTGGG 59.785 41.667 5.42 0.00 46.04 4.12
684 740 2.171079 CCACGCACGCATACGGAAT 61.171 57.895 0.00 0.00 46.04 3.01
708 3494 0.741221 GTGCGGAAGACAGATGGGTC 60.741 60.000 0.00 0.00 38.08 4.46
741 3527 2.266055 GGGCGTGGAGAAGACAGG 59.734 66.667 0.00 0.00 0.00 4.00
823 3613 4.633565 GCCTCGATTGATTTGATAGGATCC 59.366 45.833 2.48 2.48 0.00 3.36
828 3618 3.499918 GGTGGCCTCGATTGATTTGATAG 59.500 47.826 3.32 0.00 0.00 2.08
863 3654 0.692476 CTGTGATTGGTGGAGGGTGA 59.308 55.000 0.00 0.00 0.00 4.02
878 3670 4.106925 GGGGGAGCAGGCTCTGTG 62.107 72.222 19.67 0.00 42.38 3.66
959 3756 1.679898 GGAGACTTGTGAGGTGGGG 59.320 63.158 0.00 0.00 0.00 4.96
966 3763 0.596577 CTTCGACGGGAGACTTGTGA 59.403 55.000 0.00 0.00 0.00 3.58
971 3768 2.995872 GCTGCTTCGACGGGAGACT 61.996 63.158 9.65 0.00 0.00 3.24
972 3769 2.507324 GCTGCTTCGACGGGAGAC 60.507 66.667 9.65 0.00 0.00 3.36
980 3777 4.765449 ATGCCGCTGCTGCTTCGA 62.765 61.111 16.81 0.00 38.71 3.71
981 3778 4.233635 GATGCCGCTGCTGCTTCG 62.234 66.667 16.81 4.17 38.71 3.79
1058 3875 1.447489 CTGAGAAGCTCCGCCACTG 60.447 63.158 0.00 0.00 0.00 3.66
1059 3876 2.654079 CCTGAGAAGCTCCGCCACT 61.654 63.158 0.00 0.00 0.00 4.00
1060 3877 2.125350 CCTGAGAAGCTCCGCCAC 60.125 66.667 0.00 0.00 0.00 5.01
1061 3878 3.393970 CCCTGAGAAGCTCCGCCA 61.394 66.667 0.00 0.00 0.00 5.69
1062 3879 4.168291 CCCCTGAGAAGCTCCGCC 62.168 72.222 0.00 0.00 0.00 6.13
1063 3880 4.847444 GCCCCTGAGAAGCTCCGC 62.847 72.222 0.00 0.00 0.00 5.54
1064 3881 4.168291 GGCCCCTGAGAAGCTCCG 62.168 72.222 0.00 0.00 0.00 4.63
1065 3882 2.606587 TTGGCCCCTGAGAAGCTCC 61.607 63.158 0.00 0.00 0.00 4.70
1066 3883 1.377856 GTTGGCCCCTGAGAAGCTC 60.378 63.158 0.00 0.00 0.00 4.09
1067 3884 2.759795 GTTGGCCCCTGAGAAGCT 59.240 61.111 0.00 0.00 0.00 3.74
1068 3885 2.361737 GGTTGGCCCCTGAGAAGC 60.362 66.667 0.00 0.00 0.00 3.86
1069 3886 3.500635 AGGTTGGCCCCTGAGAAG 58.499 61.111 0.00 0.00 32.11 2.85
1098 3915 1.288188 AAAAATTCATGGGCTGGGGG 58.712 50.000 0.00 0.00 0.00 5.40
1115 3932 9.250246 CCAAATACTAAGGGGTATTTCAGAAAA 57.750 33.333 0.00 0.00 45.12 2.29
1116 3933 7.340999 GCCAAATACTAAGGGGTATTTCAGAAA 59.659 37.037 0.00 0.00 45.12 2.52
1117 3934 6.831868 GCCAAATACTAAGGGGTATTTCAGAA 59.168 38.462 8.92 0.00 45.12 3.02
1118 3935 6.362248 GCCAAATACTAAGGGGTATTTCAGA 58.638 40.000 8.92 0.00 45.12 3.27
1119 3936 5.535030 GGCCAAATACTAAGGGGTATTTCAG 59.465 44.000 0.00 6.17 45.12 3.02
1120 3937 5.451354 GGCCAAATACTAAGGGGTATTTCA 58.549 41.667 0.00 0.00 45.12 2.69
1121 3938 4.831155 GGGCCAAATACTAAGGGGTATTTC 59.169 45.833 4.39 1.82 45.12 2.17
1122 3939 4.233287 TGGGCCAAATACTAAGGGGTATTT 59.767 41.667 2.13 6.74 46.72 1.40
1123 3940 3.794971 TGGGCCAAATACTAAGGGGTATT 59.205 43.478 2.13 0.00 42.15 1.89
1124 3941 3.409159 TGGGCCAAATACTAAGGGGTAT 58.591 45.455 2.13 0.00 34.29 2.73
1125 3942 2.861261 TGGGCCAAATACTAAGGGGTA 58.139 47.619 2.13 0.00 0.00 3.69
1126 3943 1.688750 TGGGCCAAATACTAAGGGGT 58.311 50.000 2.13 0.00 0.00 4.95
1127 3944 4.292306 AGATATGGGCCAAATACTAAGGGG 59.708 45.833 11.89 0.00 0.00 4.79
1128 3945 5.014123 TGAGATATGGGCCAAATACTAAGGG 59.986 44.000 11.89 0.00 0.00 3.95
1129 3946 6.126863 TGAGATATGGGCCAAATACTAAGG 57.873 41.667 11.89 0.00 0.00 2.69
1130 3947 6.150140 GCTTGAGATATGGGCCAAATACTAAG 59.850 42.308 11.89 12.84 0.00 2.18
1131 3948 6.003950 GCTTGAGATATGGGCCAAATACTAA 58.996 40.000 11.89 1.71 0.00 2.24
1132 3949 5.073008 TGCTTGAGATATGGGCCAAATACTA 59.927 40.000 11.89 0.00 0.00 1.82
1133 3950 4.141181 TGCTTGAGATATGGGCCAAATACT 60.141 41.667 11.89 8.01 0.00 2.12
1134 3951 4.144297 TGCTTGAGATATGGGCCAAATAC 58.856 43.478 11.89 2.52 0.00 1.89
1135 3952 4.451891 TGCTTGAGATATGGGCCAAATA 57.548 40.909 11.89 0.00 0.00 1.40
1136 3953 3.317455 TGCTTGAGATATGGGCCAAAT 57.683 42.857 11.89 0.00 0.00 2.32
1137 3954 2.824689 TGCTTGAGATATGGGCCAAA 57.175 45.000 11.89 0.00 0.00 3.28
1138 3955 2.824689 TTGCTTGAGATATGGGCCAA 57.175 45.000 11.89 0.00 0.00 4.52
1139 3956 2.824689 TTTGCTTGAGATATGGGCCA 57.175 45.000 9.61 9.61 0.00 5.36
1140 3957 3.638160 TGATTTTGCTTGAGATATGGGCC 59.362 43.478 0.00 0.00 0.00 5.80
1141 3958 4.795308 GCTGATTTTGCTTGAGATATGGGC 60.795 45.833 0.00 0.00 0.00 5.36
1142 3959 4.261909 GGCTGATTTTGCTTGAGATATGGG 60.262 45.833 0.00 0.00 0.00 4.00
1143 3960 4.261909 GGGCTGATTTTGCTTGAGATATGG 60.262 45.833 0.00 0.00 0.00 2.74
1144 3961 4.340097 TGGGCTGATTTTGCTTGAGATATG 59.660 41.667 0.00 0.00 0.00 1.78
1145 3962 4.539726 TGGGCTGATTTTGCTTGAGATAT 58.460 39.130 0.00 0.00 0.00 1.63
1146 3963 3.966979 TGGGCTGATTTTGCTTGAGATA 58.033 40.909 0.00 0.00 0.00 1.98
1147 3964 2.811410 TGGGCTGATTTTGCTTGAGAT 58.189 42.857 0.00 0.00 0.00 2.75
1148 3965 2.291209 TGGGCTGATTTTGCTTGAGA 57.709 45.000 0.00 0.00 0.00 3.27
1149 3966 3.389925 TTTGGGCTGATTTTGCTTGAG 57.610 42.857 0.00 0.00 0.00 3.02
1150 3967 3.834489 TTTTGGGCTGATTTTGCTTGA 57.166 38.095 0.00 0.00 0.00 3.02
1151 3968 4.996122 TGTATTTTGGGCTGATTTTGCTTG 59.004 37.500 0.00 0.00 0.00 4.01
1152 3969 5.226194 TGTATTTTGGGCTGATTTTGCTT 57.774 34.783 0.00 0.00 0.00 3.91
1153 3970 4.888326 TGTATTTTGGGCTGATTTTGCT 57.112 36.364 0.00 0.00 0.00 3.91
1154 3971 7.280652 ACAATATGTATTTTGGGCTGATTTTGC 59.719 33.333 1.27 0.00 0.00 3.68
1155 3972 8.721019 ACAATATGTATTTTGGGCTGATTTTG 57.279 30.769 1.27 0.00 0.00 2.44
1156 3973 9.737844 AAACAATATGTATTTTGGGCTGATTTT 57.262 25.926 1.27 0.00 0.00 1.82
1157 3974 9.165035 CAAACAATATGTATTTTGGGCTGATTT 57.835 29.630 1.27 0.00 0.00 2.17
1158 3975 7.280652 GCAAACAATATGTATTTTGGGCTGATT 59.719 33.333 0.00 0.00 0.00 2.57
1159 3976 6.762661 GCAAACAATATGTATTTTGGGCTGAT 59.237 34.615 0.00 0.00 0.00 2.90
1160 3977 6.105333 GCAAACAATATGTATTTTGGGCTGA 58.895 36.000 0.00 0.00 0.00 4.26
1161 3978 5.294060 GGCAAACAATATGTATTTTGGGCTG 59.706 40.000 0.00 0.00 0.00 4.85
1162 3979 5.427378 GGCAAACAATATGTATTTTGGGCT 58.573 37.500 0.00 0.00 0.00 5.19
1163 3980 4.574421 GGGCAAACAATATGTATTTTGGGC 59.426 41.667 0.00 0.00 0.00 5.36
1164 3981 5.122519 GGGGCAAACAATATGTATTTTGGG 58.877 41.667 0.00 0.00 0.00 4.12
1165 3982 5.122519 GGGGGCAAACAATATGTATTTTGG 58.877 41.667 0.00 0.00 0.00 3.28
1201 4018 0.926293 TTGGGCTGAAATCTAGGGGG 59.074 55.000 0.00 0.00 0.00 5.40
1202 4019 1.752084 GCTTGGGCTGAAATCTAGGGG 60.752 57.143 0.00 0.00 35.22 4.79
1203 4020 1.685148 GCTTGGGCTGAAATCTAGGG 58.315 55.000 0.00 0.00 35.22 3.53
1468 4285 1.202891 GGTGGGCTTCTTGTTGTACCT 60.203 52.381 0.00 0.00 0.00 3.08
1470 4287 1.975660 TGGTGGGCTTCTTGTTGTAC 58.024 50.000 0.00 0.00 0.00 2.90
1593 4410 6.535508 ACGACAGAGAACAAAATATCTAAGCC 59.464 38.462 0.00 0.00 0.00 4.35
1603 4420 2.169769 ACCAGGACGACAGAGAACAAAA 59.830 45.455 0.00 0.00 0.00 2.44
1605 4422 1.068588 CACCAGGACGACAGAGAACAA 59.931 52.381 0.00 0.00 0.00 2.83
1656 5318 6.370718 AGTTACAAGATGAAATGGTACGAACC 59.629 38.462 0.00 0.00 46.98 3.62
1668 5330 5.042463 TCCCACACAAGTTACAAGATGAA 57.958 39.130 0.00 0.00 0.00 2.57
1696 5367 6.566079 ATTCCTCCAGATCATGAAACAGTA 57.434 37.500 0.00 0.00 0.00 2.74
1768 5897 4.021016 AGCCGTTGTCTGAAGAGATTTACT 60.021 41.667 0.00 0.00 0.00 2.24
1798 5927 4.038282 TGAAACAAAGAAGCATCTGCACAT 59.962 37.500 4.79 0.00 45.16 3.21
1875 6004 1.273886 TGTACATGTACTCGCCTGCAA 59.726 47.619 30.69 9.67 37.00 4.08
1876 6005 0.892063 TGTACATGTACTCGCCTGCA 59.108 50.000 30.69 10.39 37.00 4.41
1878 6007 1.202417 CCCTGTACATGTACTCGCCTG 60.202 57.143 30.69 15.97 37.00 4.85
1922 6070 3.114616 CGCCGTCACTTCTGCCTG 61.115 66.667 0.00 0.00 0.00 4.85
1927 6075 1.299926 GTCACACGCCGTCACTTCT 60.300 57.895 0.00 0.00 0.00 2.85
1984 6152 4.291249 ACAACCCAGCCTAATTAAGAGGAA 59.709 41.667 9.85 0.00 35.99 3.36
1990 6158 5.249780 TCTGAACAACCCAGCCTAATTAA 57.750 39.130 0.00 0.00 0.00 1.40
2053 6307 3.562176 GGATCCTGAAACATTGTGTCCCT 60.562 47.826 3.84 0.00 0.00 4.20
2075 6331 2.386661 ACACCATTACTGCTTCTCCG 57.613 50.000 0.00 0.00 0.00 4.63
2082 6338 3.641437 TCAAAGCAACACCATTACTGC 57.359 42.857 0.00 0.00 34.96 4.40
2083 6339 5.048504 ACAGATCAAAGCAACACCATTACTG 60.049 40.000 0.00 0.00 0.00 2.74
2116 6373 3.071602 AGGGACGATCATGGTAAGGATTG 59.928 47.826 0.00 0.00 34.69 2.67
2117 6374 3.071602 CAGGGACGATCATGGTAAGGATT 59.928 47.826 0.00 0.00 0.00 3.01
2118 6375 2.634940 CAGGGACGATCATGGTAAGGAT 59.365 50.000 0.00 0.00 0.00 3.24
2119 6376 2.039418 CAGGGACGATCATGGTAAGGA 58.961 52.381 0.00 0.00 0.00 3.36
2120 6377 1.762957 ACAGGGACGATCATGGTAAGG 59.237 52.381 0.00 0.00 0.00 2.69
2121 6378 3.118775 TCAACAGGGACGATCATGGTAAG 60.119 47.826 0.00 0.00 0.00 2.34
2122 6379 2.835156 TCAACAGGGACGATCATGGTAA 59.165 45.455 0.00 0.00 0.00 2.85
2124 6381 1.275666 TCAACAGGGACGATCATGGT 58.724 50.000 0.00 0.00 0.00 3.55
2125 6382 2.627515 ATCAACAGGGACGATCATGG 57.372 50.000 0.00 0.00 0.00 3.66
2126 6383 4.395854 TGAAAATCAACAGGGACGATCATG 59.604 41.667 0.00 0.00 0.00 3.07
2127 6384 4.588899 TGAAAATCAACAGGGACGATCAT 58.411 39.130 0.00 0.00 0.00 2.45
2132 6404 5.682943 TTTACTGAAAATCAACAGGGACG 57.317 39.130 0.00 0.00 38.30 4.79
2144 6416 5.800296 TCTCCCATGACGATTTACTGAAAA 58.200 37.500 0.00 0.00 0.00 2.29
2157 6429 2.029838 ATCGCTTGTTCTCCCATGAC 57.970 50.000 0.00 0.00 0.00 3.06
2161 6433 2.859165 AAGAATCGCTTGTTCTCCCA 57.141 45.000 0.00 0.00 34.97 4.37
2163 6435 6.963049 TTACTAAAGAATCGCTTGTTCTCC 57.037 37.500 0.00 0.00 36.80 3.71
2207 6479 1.811266 ACAGATGCGTCGCCACATC 60.811 57.895 15.88 11.19 42.45 3.06
2208 6480 2.102438 CACAGATGCGTCGCCACAT 61.102 57.895 15.88 0.75 0.00 3.21
2255 6527 5.529430 TGTGTGGACAATTGAACTATTCGTT 59.471 36.000 13.59 0.00 38.91 3.85
2261 6533 9.898152 TCATAATATGTGTGGACAATTGAACTA 57.102 29.630 13.59 0.92 35.11 2.24
2279 6551 4.351111 ACGCCCTCTTTTCCCTCATAATAT 59.649 41.667 0.00 0.00 0.00 1.28
2280 6552 3.714798 ACGCCCTCTTTTCCCTCATAATA 59.285 43.478 0.00 0.00 0.00 0.98
2283 6555 1.580059 ACGCCCTCTTTTCCCTCATA 58.420 50.000 0.00 0.00 0.00 2.15
2285 6557 0.476771 AAACGCCCTCTTTTCCCTCA 59.523 50.000 0.00 0.00 0.00 3.86
2295 6567 1.087501 GTCCTGATTGAAACGCCCTC 58.912 55.000 0.00 0.00 0.00 4.30
2299 6571 3.437049 AGCTTAAGTCCTGATTGAAACGC 59.563 43.478 4.02 0.00 0.00 4.84
2310 6582 4.104831 ACCAGGAATGTAGCTTAAGTCCT 58.895 43.478 10.59 10.59 35.87 3.85
2313 6585 6.808321 TGATACCAGGAATGTAGCTTAAGT 57.192 37.500 4.02 0.00 0.00 2.24
2318 6590 5.300286 GCAAAATGATACCAGGAATGTAGCT 59.700 40.000 0.00 0.00 0.00 3.32
2329 6601 4.202192 TGCAACAACAGCAAAATGATACCA 60.202 37.500 0.00 0.00 39.39 3.25
2361 6633 4.722346 GCGCTCAGTCTGAAAAATTAGACG 60.722 45.833 0.00 0.97 46.05 4.18
2362 6634 4.642953 GCGCTCAGTCTGAAAAATTAGAC 58.357 43.478 0.00 0.00 42.77 2.59
2363 6635 3.367932 CGCGCTCAGTCTGAAAAATTAGA 59.632 43.478 5.56 0.00 0.00 2.10
2364 6636 3.367932 TCGCGCTCAGTCTGAAAAATTAG 59.632 43.478 5.56 0.00 0.00 1.73
2365 6637 3.122948 GTCGCGCTCAGTCTGAAAAATTA 59.877 43.478 5.56 0.00 0.00 1.40
2366 6638 2.096218 GTCGCGCTCAGTCTGAAAAATT 60.096 45.455 5.56 0.00 0.00 1.82
2367 6639 1.461127 GTCGCGCTCAGTCTGAAAAAT 59.539 47.619 5.56 0.00 0.00 1.82
2368 6640 0.859232 GTCGCGCTCAGTCTGAAAAA 59.141 50.000 5.56 0.00 0.00 1.94
2369 6641 0.249280 TGTCGCGCTCAGTCTGAAAA 60.249 50.000 5.56 0.00 0.00 2.29
2370 6642 0.038251 ATGTCGCGCTCAGTCTGAAA 60.038 50.000 5.56 0.00 0.00 2.69
2371 6643 0.733909 CATGTCGCGCTCAGTCTGAA 60.734 55.000 5.56 0.00 0.00 3.02
2372 6644 1.153958 CATGTCGCGCTCAGTCTGA 60.154 57.895 5.56 1.78 0.00 3.27
2373 6645 2.163390 CCATGTCGCGCTCAGTCTG 61.163 63.158 5.56 0.00 0.00 3.51
2374 6646 2.182791 CCATGTCGCGCTCAGTCT 59.817 61.111 5.56 0.00 0.00 3.24
2375 6647 2.887568 CCCATGTCGCGCTCAGTC 60.888 66.667 5.56 0.00 0.00 3.51
2376 6648 3.649277 GACCCATGTCGCGCTCAGT 62.649 63.158 5.56 0.00 0.00 3.41
2377 6649 2.887568 GACCCATGTCGCGCTCAG 60.888 66.667 5.56 0.00 0.00 3.35
2378 6650 3.381983 AGACCCATGTCGCGCTCA 61.382 61.111 5.56 5.08 46.51 4.26
2379 6651 2.887568 CAGACCCATGTCGCGCTC 60.888 66.667 5.56 0.00 46.51 5.03
2380 6652 4.457496 CCAGACCCATGTCGCGCT 62.457 66.667 5.56 0.00 46.51 5.92
2381 6653 3.950794 TTCCAGACCCATGTCGCGC 62.951 63.158 0.00 0.00 46.51 6.86
2382 6654 2.100631 GTTCCAGACCCATGTCGCG 61.101 63.158 0.00 0.00 46.51 5.87
2383 6655 1.021390 CAGTTCCAGACCCATGTCGC 61.021 60.000 0.00 0.00 46.51 5.19
2384 6656 0.321671 ACAGTTCCAGACCCATGTCG 59.678 55.000 0.00 0.00 46.51 4.35
2385 6657 2.568623 AACAGTTCCAGACCCATGTC 57.431 50.000 0.00 0.00 42.09 3.06
2386 6658 3.244911 CCTAAACAGTTCCAGACCCATGT 60.245 47.826 0.00 0.00 0.00 3.21
2387 6659 3.347216 CCTAAACAGTTCCAGACCCATG 58.653 50.000 0.00 0.00 0.00 3.66
2388 6660 2.290960 GCCTAAACAGTTCCAGACCCAT 60.291 50.000 0.00 0.00 0.00 4.00
2389 6661 1.073284 GCCTAAACAGTTCCAGACCCA 59.927 52.381 0.00 0.00 0.00 4.51
2390 6662 1.073284 TGCCTAAACAGTTCCAGACCC 59.927 52.381 0.00 0.00 0.00 4.46
2391 6663 2.561478 TGCCTAAACAGTTCCAGACC 57.439 50.000 0.00 0.00 0.00 3.85
2392 6664 3.251004 CACTTGCCTAAACAGTTCCAGAC 59.749 47.826 0.00 0.00 0.00 3.51
2393 6665 3.135712 TCACTTGCCTAAACAGTTCCAGA 59.864 43.478 0.00 0.00 0.00 3.86
2394 6666 3.476552 TCACTTGCCTAAACAGTTCCAG 58.523 45.455 0.00 0.00 0.00 3.86
2395 6667 3.569194 TCACTTGCCTAAACAGTTCCA 57.431 42.857 0.00 0.00 0.00 3.53
2396 6668 5.453567 AAATCACTTGCCTAAACAGTTCC 57.546 39.130 0.00 0.00 0.00 3.62
2397 6669 6.861572 GGTAAAATCACTTGCCTAAACAGTTC 59.138 38.462 0.00 0.00 0.00 3.01
2398 6670 6.549736 AGGTAAAATCACTTGCCTAAACAGTT 59.450 34.615 0.00 0.00 39.38 3.16
2399 6671 6.068670 AGGTAAAATCACTTGCCTAAACAGT 58.931 36.000 0.00 0.00 39.38 3.55
2400 6672 6.349363 GGAGGTAAAATCACTTGCCTAAACAG 60.349 42.308 0.00 0.00 41.02 3.16
2401 6673 5.475564 GGAGGTAAAATCACTTGCCTAAACA 59.524 40.000 0.00 0.00 41.02 2.83
2402 6674 5.391629 CGGAGGTAAAATCACTTGCCTAAAC 60.392 44.000 0.00 0.00 41.02 2.01
2403 6675 4.698304 CGGAGGTAAAATCACTTGCCTAAA 59.302 41.667 0.00 0.00 41.02 1.85
2404 6676 4.258543 CGGAGGTAAAATCACTTGCCTAA 58.741 43.478 0.00 0.00 41.02 2.69
2405 6677 3.869065 CGGAGGTAAAATCACTTGCCTA 58.131 45.455 0.00 0.00 41.02 3.93
2406 6678 2.711542 CGGAGGTAAAATCACTTGCCT 58.288 47.619 0.00 0.00 43.32 4.75
2407 6679 1.132453 GCGGAGGTAAAATCACTTGCC 59.868 52.381 0.00 0.00 0.00 4.52
2408 6680 1.810151 TGCGGAGGTAAAATCACTTGC 59.190 47.619 0.00 0.00 0.00 4.01
2409 6681 3.670627 GCTTGCGGAGGTAAAATCACTTG 60.671 47.826 0.00 0.00 0.00 3.16
2410 6682 2.488153 GCTTGCGGAGGTAAAATCACTT 59.512 45.455 0.00 0.00 0.00 3.16
2411 6683 2.084546 GCTTGCGGAGGTAAAATCACT 58.915 47.619 0.00 0.00 0.00 3.41
2412 6684 1.202031 CGCTTGCGGAGGTAAAATCAC 60.202 52.381 7.16 0.00 0.00 3.06
2413 6685 1.083489 CGCTTGCGGAGGTAAAATCA 58.917 50.000 7.16 0.00 0.00 2.57
2414 6686 0.377203 CCGCTTGCGGAGGTAAAATC 59.623 55.000 27.61 0.00 0.00 2.17
2415 6687 1.654023 GCCGCTTGCGGAGGTAAAAT 61.654 55.000 34.18 0.00 37.22 1.82
2416 6688 2.329614 GCCGCTTGCGGAGGTAAAA 61.330 57.895 34.18 0.00 37.22 1.52
2417 6689 2.744709 GCCGCTTGCGGAGGTAAA 60.745 61.111 34.18 0.00 37.22 2.01
2418 6690 4.770874 GGCCGCTTGCGGAGGTAA 62.771 66.667 34.18 0.00 42.61 2.85
2425 6697 4.101790 AAATCACGGCCGCTTGCG 62.102 61.111 28.58 9.04 42.61 4.85
2426 6698 2.202479 GAAATCACGGCCGCTTGC 60.202 61.111 28.58 11.71 40.16 4.01
2427 6699 1.135315 CTGAAATCACGGCCGCTTG 59.865 57.895 28.58 18.10 0.00 4.01
2428 6700 1.003839 TCTGAAATCACGGCCGCTT 60.004 52.632 28.58 14.08 0.00 4.68
2429 6701 1.741770 GTCTGAAATCACGGCCGCT 60.742 57.895 28.58 10.12 0.00 5.52
2430 6702 1.741770 AGTCTGAAATCACGGCCGC 60.742 57.895 28.58 8.37 0.00 6.53
2431 6703 0.389817 TCAGTCTGAAATCACGGCCG 60.390 55.000 26.86 26.86 0.00 6.13
2432 6704 1.079503 GTCAGTCTGAAATCACGGCC 58.920 55.000 3.51 0.00 0.00 6.13
2433 6705 1.461127 GTGTCAGTCTGAAATCACGGC 59.539 52.381 3.51 0.00 0.00 5.68
2434 6706 1.721389 CGTGTCAGTCTGAAATCACGG 59.279 52.381 25.54 13.81 39.30 4.94
2435 6707 2.661594 TCGTGTCAGTCTGAAATCACG 58.338 47.619 26.56 26.56 42.19 4.35
2436 6708 5.597813 AAATCGTGTCAGTCTGAAATCAC 57.402 39.130 3.51 7.96 0.00 3.06
2437 6709 5.757808 TGAAAATCGTGTCAGTCTGAAATCA 59.242 36.000 3.51 0.00 0.00 2.57
2438 6710 6.228273 TGAAAATCGTGTCAGTCTGAAATC 57.772 37.500 3.51 0.00 0.00 2.17
2439 6711 6.233430 CTGAAAATCGTGTCAGTCTGAAAT 57.767 37.500 3.51 0.00 37.16 2.17
2440 6712 5.657470 CTGAAAATCGTGTCAGTCTGAAA 57.343 39.130 3.51 0.00 37.16 2.69
2447 6719 6.636447 TGCAAAATTACTGAAAATCGTGTCAG 59.364 34.615 0.00 0.00 45.59 3.51
2448 6720 6.416455 GTGCAAAATTACTGAAAATCGTGTCA 59.584 34.615 0.00 0.00 0.00 3.58
2449 6721 6.636850 AGTGCAAAATTACTGAAAATCGTGTC 59.363 34.615 0.00 0.00 0.00 3.67
2450 6722 6.417635 CAGTGCAAAATTACTGAAAATCGTGT 59.582 34.615 0.53 0.00 45.46 4.49
2451 6723 6.614162 GCAGTGCAAAATTACTGAAAATCGTG 60.614 38.462 11.09 0.00 45.46 4.35
2452 6724 5.402270 GCAGTGCAAAATTACTGAAAATCGT 59.598 36.000 11.09 0.00 45.46 3.73
2453 6725 5.401972 TGCAGTGCAAAATTACTGAAAATCG 59.598 36.000 17.26 0.00 45.46 3.34
2454 6726 6.768029 TGCAGTGCAAAATTACTGAAAATC 57.232 33.333 17.26 0.00 45.46 2.17
2469 6741 3.873361 GTCTTGAGCTATATTGCAGTGCA 59.127 43.478 15.37 15.37 36.47 4.57
2470 6742 3.873361 TGTCTTGAGCTATATTGCAGTGC 59.127 43.478 8.58 8.58 34.99 4.40
2471 6743 5.233902 GTCTGTCTTGAGCTATATTGCAGTG 59.766 44.000 11.72 0.00 34.99 3.66
2472 6744 5.355596 GTCTGTCTTGAGCTATATTGCAGT 58.644 41.667 11.72 0.00 34.99 4.40
2473 6745 4.443725 CGTCTGTCTTGAGCTATATTGCAG 59.556 45.833 11.72 0.74 34.99 4.41
2474 6746 4.363138 CGTCTGTCTTGAGCTATATTGCA 58.637 43.478 11.72 0.00 34.99 4.08
2475 6747 3.183373 GCGTCTGTCTTGAGCTATATTGC 59.817 47.826 0.41 0.41 0.00 3.56
2476 6748 3.423536 CGCGTCTGTCTTGAGCTATATTG 59.576 47.826 0.00 0.00 0.00 1.90
2477 6749 3.633235 CGCGTCTGTCTTGAGCTATATT 58.367 45.455 0.00 0.00 0.00 1.28
2478 6750 2.605823 GCGCGTCTGTCTTGAGCTATAT 60.606 50.000 8.43 0.00 0.00 0.86
2479 6751 1.268589 GCGCGTCTGTCTTGAGCTATA 60.269 52.381 8.43 0.00 0.00 1.31
2480 6752 0.526524 GCGCGTCTGTCTTGAGCTAT 60.527 55.000 8.43 0.00 0.00 2.97
2481 6753 1.154016 GCGCGTCTGTCTTGAGCTA 60.154 57.895 8.43 0.00 0.00 3.32
2482 6754 2.431601 GCGCGTCTGTCTTGAGCT 60.432 61.111 8.43 0.00 0.00 4.09
2483 6755 3.482783 GGCGCGTCTGTCTTGAGC 61.483 66.667 8.43 0.00 0.00 4.26
2484 6756 2.811317 GGGCGCGTCTGTCTTGAG 60.811 66.667 11.94 0.00 0.00 3.02
2485 6757 4.373116 GGGGCGCGTCTGTCTTGA 62.373 66.667 11.94 0.00 0.00 3.02
2497 6769 4.038080 GTGCTGAAAACCGGGGCG 62.038 66.667 6.32 0.00 0.00 6.13
2498 6770 2.142357 GAAGTGCTGAAAACCGGGGC 62.142 60.000 6.32 0.42 0.00 5.80
2499 6771 0.537371 AGAAGTGCTGAAAACCGGGG 60.537 55.000 6.32 0.00 0.00 5.73
2500 6772 0.875059 GAGAAGTGCTGAAAACCGGG 59.125 55.000 6.32 0.00 0.00 5.73
2501 6773 0.875059 GGAGAAGTGCTGAAAACCGG 59.125 55.000 0.00 0.00 0.00 5.28
2502 6774 1.264288 GTGGAGAAGTGCTGAAAACCG 59.736 52.381 0.00 0.00 0.00 4.44
2503 6775 2.291741 CAGTGGAGAAGTGCTGAAAACC 59.708 50.000 0.00 0.00 0.00 3.27
2504 6776 3.615849 CAGTGGAGAAGTGCTGAAAAC 57.384 47.619 0.00 0.00 0.00 2.43
2512 6784 4.510711 CAGCTATATTGCAGTGGAGAAGTG 59.489 45.833 11.72 0.00 34.99 3.16
2513 6785 4.701765 CAGCTATATTGCAGTGGAGAAGT 58.298 43.478 11.72 0.00 34.99 3.01
2514 6786 3.497640 GCAGCTATATTGCAGTGGAGAAG 59.502 47.826 11.72 0.00 41.17 2.85
2515 6787 3.135348 AGCAGCTATATTGCAGTGGAGAA 59.865 43.478 11.72 0.00 43.92 2.87
2516 6788 2.702478 AGCAGCTATATTGCAGTGGAGA 59.298 45.455 11.72 0.00 43.92 3.71
2517 6789 3.065655 GAGCAGCTATATTGCAGTGGAG 58.934 50.000 11.72 0.00 43.92 3.86
2518 6790 2.702478 AGAGCAGCTATATTGCAGTGGA 59.298 45.455 11.72 0.00 43.92 4.02
2519 6791 3.123157 AGAGCAGCTATATTGCAGTGG 57.877 47.619 11.72 0.00 43.92 4.00
2520 6792 3.875727 ACAAGAGCAGCTATATTGCAGTG 59.124 43.478 11.72 3.29 43.92 3.66
2521 6793 3.875727 CACAAGAGCAGCTATATTGCAGT 59.124 43.478 11.72 0.00 43.92 4.40
2522 6794 3.303857 GCACAAGAGCAGCTATATTGCAG 60.304 47.826 14.97 4.60 43.92 4.41
2523 6795 2.615447 GCACAAGAGCAGCTATATTGCA 59.385 45.455 14.97 0.00 43.92 4.08
2524 6796 2.615447 TGCACAAGAGCAGCTATATTGC 59.385 45.455 13.55 13.55 40.11 3.56
2525 6797 4.095334 TGTTGCACAAGAGCAGCTATATTG 59.905 41.667 11.27 11.27 46.54 1.90
2526 6798 4.264253 TGTTGCACAAGAGCAGCTATATT 58.736 39.130 0.00 0.00 46.54 1.28
2527 6799 3.875727 CTGTTGCACAAGAGCAGCTATAT 59.124 43.478 0.00 0.00 46.54 0.86
2528 6800 3.264947 CTGTTGCACAAGAGCAGCTATA 58.735 45.455 0.00 0.00 46.54 1.31
2529 6801 2.082231 CTGTTGCACAAGAGCAGCTAT 58.918 47.619 0.00 0.00 46.54 2.97
2530 6802 1.516161 CTGTTGCACAAGAGCAGCTA 58.484 50.000 0.00 0.00 46.54 3.32
2531 6803 2.328235 CTGTTGCACAAGAGCAGCT 58.672 52.632 0.00 0.00 46.54 4.24
2532 6804 4.937781 CTGTTGCACAAGAGCAGC 57.062 55.556 0.00 0.00 46.54 5.25
2536 6808 1.875514 TGCTTAGCTGTTGCACAAGAG 59.124 47.619 5.60 3.30 42.74 2.85
2537 6809 1.875514 CTGCTTAGCTGTTGCACAAGA 59.124 47.619 5.60 0.00 42.74 3.02
2538 6810 1.665161 GCTGCTTAGCTGTTGCACAAG 60.665 52.381 12.43 0.00 42.74 3.16
2539 6811 0.311790 GCTGCTTAGCTGTTGCACAA 59.688 50.000 12.43 0.00 42.74 3.33
2540 6812 0.535780 AGCTGCTTAGCTGTTGCACA 60.536 50.000 12.43 0.00 44.44 4.57
2541 6813 1.129437 GTAGCTGCTTAGCTGTTGCAC 59.871 52.381 7.79 0.00 45.81 4.57
2542 6814 1.270785 TGTAGCTGCTTAGCTGTTGCA 60.271 47.619 7.79 13.14 45.81 4.08
2543 6815 1.396301 CTGTAGCTGCTTAGCTGTTGC 59.604 52.381 7.79 10.45 45.81 4.17
2544 6816 2.670414 GACTGTAGCTGCTTAGCTGTTG 59.330 50.000 7.79 4.40 45.81 3.33
2545 6817 2.300152 TGACTGTAGCTGCTTAGCTGTT 59.700 45.455 7.79 9.12 45.81 3.16
2546 6818 1.895798 TGACTGTAGCTGCTTAGCTGT 59.104 47.619 7.79 8.91 45.81 4.40
2547 6819 2.094286 AGTGACTGTAGCTGCTTAGCTG 60.094 50.000 7.79 6.22 45.81 4.24
2549 6821 2.535331 GAGTGACTGTAGCTGCTTAGC 58.465 52.381 7.79 0.00 0.00 3.09
2550 6822 2.493675 TGGAGTGACTGTAGCTGCTTAG 59.506 50.000 7.79 9.71 0.00 2.18
2551 6823 2.493675 CTGGAGTGACTGTAGCTGCTTA 59.506 50.000 7.79 0.00 0.00 3.09
2552 6824 1.274728 CTGGAGTGACTGTAGCTGCTT 59.725 52.381 7.79 0.00 0.00 3.91
2553 6825 0.894141 CTGGAGTGACTGTAGCTGCT 59.106 55.000 7.57 7.57 0.00 4.24
2554 6826 0.108424 CCTGGAGTGACTGTAGCTGC 60.108 60.000 0.00 0.00 0.00 5.25
2555 6827 1.550327 TCCTGGAGTGACTGTAGCTG 58.450 55.000 0.00 0.00 0.00 4.24
2556 6828 2.541233 ATCCTGGAGTGACTGTAGCT 57.459 50.000 1.52 0.00 0.00 3.32
2557 6829 3.292460 ACTATCCTGGAGTGACTGTAGC 58.708 50.000 1.52 0.00 0.00 3.58
2558 6830 7.589958 AAATACTATCCTGGAGTGACTGTAG 57.410 40.000 1.52 0.00 0.00 2.74
2559 6831 7.973048 AAAATACTATCCTGGAGTGACTGTA 57.027 36.000 1.52 0.00 0.00 2.74
2560 6832 6.875972 AAAATACTATCCTGGAGTGACTGT 57.124 37.500 1.52 0.00 0.00 3.55
2561 6833 6.763610 GGAAAAATACTATCCTGGAGTGACTG 59.236 42.308 1.52 0.00 0.00 3.51
2562 6834 6.443849 TGGAAAAATACTATCCTGGAGTGACT 59.556 38.462 1.52 0.00 34.24 3.41
2563 6835 6.539103 GTGGAAAAATACTATCCTGGAGTGAC 59.461 42.308 1.52 0.00 34.24 3.67
2564 6836 6.629515 CGTGGAAAAATACTATCCTGGAGTGA 60.630 42.308 1.52 0.00 34.24 3.41
2565 6837 5.523916 CGTGGAAAAATACTATCCTGGAGTG 59.476 44.000 1.52 0.00 34.24 3.51
2566 6838 5.424252 TCGTGGAAAAATACTATCCTGGAGT 59.576 40.000 1.52 0.00 34.24 3.85
2567 6839 5.914033 TCGTGGAAAAATACTATCCTGGAG 58.086 41.667 1.52 0.00 34.24 3.86
2568 6840 5.943349 TCGTGGAAAAATACTATCCTGGA 57.057 39.130 0.00 0.00 34.24 3.86
2569 6841 5.701290 GGATCGTGGAAAAATACTATCCTGG 59.299 44.000 0.00 0.00 36.65 4.45
2570 6842 5.701290 GGGATCGTGGAAAAATACTATCCTG 59.299 44.000 0.00 0.00 38.51 3.86
2571 6843 5.510861 CGGGATCGTGGAAAAATACTATCCT 60.511 44.000 0.00 0.00 38.51 3.24
2572 6844 4.689345 CGGGATCGTGGAAAAATACTATCC 59.311 45.833 0.00 0.00 38.03 2.59
2573 6845 5.535333 TCGGGATCGTGGAAAAATACTATC 58.465 41.667 0.00 0.00 37.69 2.08
2574 6846 5.540400 TCGGGATCGTGGAAAAATACTAT 57.460 39.130 0.00 0.00 37.69 2.12
2575 6847 5.341872 TTCGGGATCGTGGAAAAATACTA 57.658 39.130 0.00 0.00 37.69 1.82
2576 6848 3.899052 TCGGGATCGTGGAAAAATACT 57.101 42.857 0.00 0.00 37.69 2.12
2577 6849 4.905269 CTTTCGGGATCGTGGAAAAATAC 58.095 43.478 6.11 0.00 37.69 1.89


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.