Multiple sequence alignment - TraesCS7B01G392600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G392600 chr7B 100.000 7717 0 0 478 8194 659243686 659251402 0.000000e+00 14251.0
1 TraesCS7B01G392600 chr7B 100.000 270 0 0 1 270 659243209 659243478 4.420000e-137 499.0
2 TraesCS7B01G392600 chr7B 100.000 36 0 0 6979 7014 659250151 659250186 5.310000e-07 67.6
3 TraesCS7B01G392600 chr7B 100.000 36 0 0 6943 6978 659250187 659250222 5.310000e-07 67.6
4 TraesCS7B01G392600 chr7B 93.182 44 3 0 3549 3592 662205398 662205355 1.910000e-06 65.8
5 TraesCS7B01G392600 chr7A 94.003 3885 158 30 3134 6980 679752955 679756802 0.000000e+00 5814.0
6 TraesCS7B01G392600 chr7A 91.032 2598 129 47 610 3131 679750350 679752919 0.000000e+00 3411.0
7 TraesCS7B01G392600 chr7A 93.782 579 20 10 6979 7551 679756765 679757333 0.000000e+00 856.0
8 TraesCS7B01G392600 chr7A 81.070 486 38 26 7723 8194 679757749 679758194 1.020000e-88 339.0
9 TraesCS7B01G392600 chr7D 94.472 3600 126 23 3134 6685 587808691 587812265 0.000000e+00 5478.0
10 TraesCS7B01G392600 chr7D 90.000 2680 175 47 490 3129 587806027 587808653 0.000000e+00 3378.0
11 TraesCS7B01G392600 chr7D 94.143 700 23 10 6979 7674 587812684 587813369 0.000000e+00 1050.0
12 TraesCS7B01G392600 chr7D 87.759 482 36 17 7723 8194 587813481 587813949 7.230000e-150 542.0
13 TraesCS7B01G392600 chr7D 94.595 296 12 3 6683 6978 587812427 587812718 9.690000e-124 455.0
14 TraesCS7B01G392600 chr2A 76.316 456 71 20 3155 3592 10578154 10578590 8.330000e-50 209.0
15 TraesCS7B01G392600 chrUn 83.663 202 33 0 3391 3592 295943219 295943018 3.020000e-44 191.0
16 TraesCS7B01G392600 chrUn 83.663 202 33 0 3391 3592 376737999 376738200 3.020000e-44 191.0
17 TraesCS7B01G392600 chr3B 83.663 202 33 0 3391 3592 728487961 728487760 3.020000e-44 191.0
18 TraesCS7B01G392600 chr2B 83.663 202 33 0 3391 3592 184643335 184643536 3.020000e-44 191.0
19 TraesCS7B01G392600 chr4A 95.455 44 2 0 3549 3592 705322969 705322926 4.100000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G392600 chr7B 659243209 659251402 8193 False 3721.3 14251 100.00000 1 8194 4 chr7B.!!$F1 8193
1 TraesCS7B01G392600 chr7A 679750350 679758194 7844 False 2605.0 5814 89.97175 610 8194 4 chr7A.!!$F1 7584
2 TraesCS7B01G392600 chr7D 587806027 587813949 7922 False 2180.6 5478 92.19380 490 8194 5 chr7D.!!$F1 7704

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
129 130 0.032813 ATTCCTGGGTCTGCCATTGG 60.033 55.000 0.00 0.0 36.17 3.16 F
1274 1347 0.198696 TTTTCCCCTTCTCCCCTCCT 59.801 55.000 0.00 0.0 0.00 3.69 F
1893 1985 0.035439 ACAATCCAAGGTACGGCAGG 60.035 55.000 0.00 0.0 0.00 4.85 F
2241 2335 1.848652 TACGCTTACCAGGAGCTTCT 58.151 50.000 0.00 0.0 37.99 2.85 F
3030 3133 2.098117 GTCAAAACTTGCTGCTGACACT 59.902 45.455 11.22 0.0 37.07 3.55 F
4322 4466 0.674895 CTTCCTTCCGTGGCTTCCAG 60.675 60.000 0.00 0.0 32.34 3.86 F
4835 5000 1.066430 TCACGGTTGGCATCCTTCTAC 60.066 52.381 12.54 0.0 0.00 2.59 F
6262 6440 1.076705 GCCCAGGTCAAAGGGGATC 60.077 63.158 0.00 0.0 45.08 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1346 1419 0.676782 CAGGAGAAACGCCCCGATTT 60.677 55.000 0.00 0.0 0.00 2.17 R
2224 2318 0.247736 ACAGAAGCTCCTGGTAAGCG 59.752 55.000 4.49 0.0 44.59 4.68 R
3268 3405 0.603569 GCCACGAGACCTTTGAGAGA 59.396 55.000 0.00 0.0 0.00 3.10 R
4059 4202 1.068588 TGGATCACTTAGGCCGATTCG 59.931 52.381 0.00 0.0 0.00 3.34 R
4835 5000 1.566018 GAACCTTCCCAGCACGTTCG 61.566 60.000 0.00 0.0 0.00 3.95 R
5213 5386 0.173481 GCCTACAGTGCAGACGATGA 59.827 55.000 0.00 0.0 0.00 2.92 R
6496 6685 0.521291 TAAACCTCATGCTTGTGCGC 59.479 50.000 0.00 0.0 43.34 6.09 R
7674 8047 0.032813 CTCTACCCCCTCCGGTTGTA 60.033 60.000 0.00 0.0 37.34 2.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 6.835914 CGATTCAGCCCAATTTATATCTCAC 58.164 40.000 0.00 0.00 0.00 3.51
25 26 6.128172 CGATTCAGCCCAATTTATATCTCACC 60.128 42.308 0.00 0.00 0.00 4.02
26 27 5.645056 TCAGCCCAATTTATATCTCACCA 57.355 39.130 0.00 0.00 0.00 4.17
27 28 6.012337 TCAGCCCAATTTATATCTCACCAA 57.988 37.500 0.00 0.00 0.00 3.67
28 29 6.430864 TCAGCCCAATTTATATCTCACCAAA 58.569 36.000 0.00 0.00 0.00 3.28
29 30 6.321181 TCAGCCCAATTTATATCTCACCAAAC 59.679 38.462 0.00 0.00 0.00 2.93
30 31 5.299279 AGCCCAATTTATATCTCACCAAACG 59.701 40.000 0.00 0.00 0.00 3.60
31 32 5.067283 GCCCAATTTATATCTCACCAAACGT 59.933 40.000 0.00 0.00 0.00 3.99
32 33 6.725246 CCCAATTTATATCTCACCAAACGTC 58.275 40.000 0.00 0.00 0.00 4.34
33 34 6.238648 CCCAATTTATATCTCACCAAACGTCC 60.239 42.308 0.00 0.00 0.00 4.79
34 35 6.317642 CCAATTTATATCTCACCAAACGTCCA 59.682 38.462 0.00 0.00 0.00 4.02
35 36 6.920569 ATTTATATCTCACCAAACGTCCAC 57.079 37.500 0.00 0.00 0.00 4.02
36 37 3.973206 ATATCTCACCAAACGTCCACA 57.027 42.857 0.00 0.00 0.00 4.17
37 38 1.878953 ATCTCACCAAACGTCCACAC 58.121 50.000 0.00 0.00 0.00 3.82
38 39 0.537653 TCTCACCAAACGTCCACACA 59.462 50.000 0.00 0.00 0.00 3.72
39 40 0.655733 CTCACCAAACGTCCACACAC 59.344 55.000 0.00 0.00 0.00 3.82
40 41 0.036294 TCACCAAACGTCCACACACA 60.036 50.000 0.00 0.00 0.00 3.72
41 42 0.098025 CACCAAACGTCCACACACAC 59.902 55.000 0.00 0.00 0.00 3.82
42 43 0.321741 ACCAAACGTCCACACACACA 60.322 50.000 0.00 0.00 0.00 3.72
43 44 0.376852 CCAAACGTCCACACACACAG 59.623 55.000 0.00 0.00 0.00 3.66
44 45 0.248054 CAAACGTCCACACACACAGC 60.248 55.000 0.00 0.00 0.00 4.40
45 46 1.373590 AAACGTCCACACACACAGCC 61.374 55.000 0.00 0.00 0.00 4.85
46 47 2.203001 CGTCCACACACACAGCCA 60.203 61.111 0.00 0.00 0.00 4.75
47 48 1.817520 CGTCCACACACACAGCCAA 60.818 57.895 0.00 0.00 0.00 4.52
48 49 1.165907 CGTCCACACACACAGCCAAT 61.166 55.000 0.00 0.00 0.00 3.16
49 50 1.032014 GTCCACACACACAGCCAATT 58.968 50.000 0.00 0.00 0.00 2.32
50 51 1.408702 GTCCACACACACAGCCAATTT 59.591 47.619 0.00 0.00 0.00 1.82
51 52 2.106566 TCCACACACACAGCCAATTTT 58.893 42.857 0.00 0.00 0.00 1.82
52 53 2.159128 TCCACACACACAGCCAATTTTG 60.159 45.455 0.00 0.00 0.00 2.44
53 54 2.159128 CCACACACACAGCCAATTTTGA 60.159 45.455 0.00 0.00 0.00 2.69
54 55 3.493002 CCACACACACAGCCAATTTTGAT 60.493 43.478 0.00 0.00 0.00 2.57
55 56 4.121317 CACACACACAGCCAATTTTGATT 58.879 39.130 0.00 0.00 0.00 2.57
56 57 4.025563 CACACACACAGCCAATTTTGATTG 60.026 41.667 0.00 0.00 0.00 2.67
57 58 3.059461 CACACACAGCCAATTTTGATTGC 60.059 43.478 0.00 0.00 0.00 3.56
58 59 2.156117 CACACAGCCAATTTTGATTGCG 59.844 45.455 0.00 0.00 0.00 4.85
59 60 2.224018 ACACAGCCAATTTTGATTGCGT 60.224 40.909 0.00 0.00 0.00 5.24
60 61 2.801679 CACAGCCAATTTTGATTGCGTT 59.198 40.909 0.00 0.00 0.00 4.84
61 62 3.248125 CACAGCCAATTTTGATTGCGTTT 59.752 39.130 0.00 0.00 0.00 3.60
62 63 3.876320 ACAGCCAATTTTGATTGCGTTTT 59.124 34.783 0.00 0.00 0.00 2.43
63 64 4.212911 CAGCCAATTTTGATTGCGTTTTG 58.787 39.130 0.00 0.00 0.00 2.44
64 65 3.876320 AGCCAATTTTGATTGCGTTTTGT 59.124 34.783 0.00 0.00 0.00 2.83
65 66 5.050499 CAGCCAATTTTGATTGCGTTTTGTA 60.050 36.000 0.00 0.00 0.00 2.41
66 67 5.700373 AGCCAATTTTGATTGCGTTTTGTAT 59.300 32.000 0.00 0.00 0.00 2.29
67 68 6.014898 GCCAATTTTGATTGCGTTTTGTATC 58.985 36.000 0.00 0.00 0.00 2.24
68 69 6.533185 CCAATTTTGATTGCGTTTTGTATCC 58.467 36.000 0.00 0.00 0.00 2.59
69 70 6.232788 CAATTTTGATTGCGTTTTGTATCCG 58.767 36.000 0.00 0.00 0.00 4.18
70 71 4.491234 TTTGATTGCGTTTTGTATCCGT 57.509 36.364 0.00 0.00 0.00 4.69
71 72 4.491234 TTGATTGCGTTTTGTATCCGTT 57.509 36.364 0.00 0.00 0.00 4.44
72 73 4.491234 TGATTGCGTTTTGTATCCGTTT 57.509 36.364 0.00 0.00 0.00 3.60
73 74 4.861210 TGATTGCGTTTTGTATCCGTTTT 58.139 34.783 0.00 0.00 0.00 2.43
74 75 5.282510 TGATTGCGTTTTGTATCCGTTTTT 58.717 33.333 0.00 0.00 0.00 1.94
94 95 3.848272 TTTCAAGATCCAATGGTTCGC 57.152 42.857 0.00 0.00 0.00 4.70
95 96 1.750193 TCAAGATCCAATGGTTCGCC 58.250 50.000 0.00 0.00 37.92 5.54
96 97 0.740737 CAAGATCCAATGGTTCGCCC 59.259 55.000 0.00 0.00 36.08 6.13
97 98 0.395724 AAGATCCAATGGTTCGCCCC 60.396 55.000 0.00 0.00 36.08 5.80
98 99 1.828224 GATCCAATGGTTCGCCCCC 60.828 63.158 0.00 0.00 36.08 5.40
99 100 3.714487 ATCCAATGGTTCGCCCCCG 62.714 63.158 0.00 0.00 36.08 5.73
111 112 2.045340 CCCCCGGCAAACTTCGAT 60.045 61.111 0.00 0.00 0.00 3.59
112 113 1.677633 CCCCCGGCAAACTTCGATT 60.678 57.895 0.00 0.00 0.00 3.34
113 114 1.654023 CCCCCGGCAAACTTCGATTC 61.654 60.000 0.00 0.00 0.00 2.52
114 115 1.654023 CCCCGGCAAACTTCGATTCC 61.654 60.000 0.00 0.00 0.00 3.01
115 116 0.676782 CCCGGCAAACTTCGATTCCT 60.677 55.000 0.00 0.00 0.00 3.36
116 117 0.447801 CCGGCAAACTTCGATTCCTG 59.552 55.000 0.00 0.00 0.00 3.86
117 118 0.447801 CGGCAAACTTCGATTCCTGG 59.552 55.000 0.00 0.00 0.00 4.45
118 119 0.811281 GGCAAACTTCGATTCCTGGG 59.189 55.000 0.00 0.00 0.00 4.45
119 120 1.534729 GCAAACTTCGATTCCTGGGT 58.465 50.000 0.00 0.00 0.00 4.51
120 121 1.468914 GCAAACTTCGATTCCTGGGTC 59.531 52.381 0.00 0.00 0.00 4.46
121 122 2.876079 GCAAACTTCGATTCCTGGGTCT 60.876 50.000 0.00 0.00 0.00 3.85
122 123 2.744202 CAAACTTCGATTCCTGGGTCTG 59.256 50.000 0.00 0.00 0.00 3.51
123 124 0.250513 ACTTCGATTCCTGGGTCTGC 59.749 55.000 0.00 0.00 0.00 4.26
124 125 0.462759 CTTCGATTCCTGGGTCTGCC 60.463 60.000 0.00 0.00 0.00 4.85
125 126 1.198094 TTCGATTCCTGGGTCTGCCA 61.198 55.000 0.00 0.00 36.17 4.92
126 127 0.982852 TCGATTCCTGGGTCTGCCAT 60.983 55.000 0.00 0.00 36.17 4.40
127 128 0.107017 CGATTCCTGGGTCTGCCATT 60.107 55.000 0.00 0.00 36.17 3.16
128 129 1.396653 GATTCCTGGGTCTGCCATTG 58.603 55.000 0.00 0.00 36.17 2.82
129 130 0.032813 ATTCCTGGGTCTGCCATTGG 60.033 55.000 0.00 0.00 36.17 3.16
130 131 1.434513 TTCCTGGGTCTGCCATTGGT 61.435 55.000 4.26 0.00 36.17 3.67
131 132 1.077265 CCTGGGTCTGCCATTGGTT 59.923 57.895 4.26 0.00 36.17 3.67
132 133 1.252904 CCTGGGTCTGCCATTGGTTG 61.253 60.000 4.26 0.00 36.17 3.77
133 134 1.880819 CTGGGTCTGCCATTGGTTGC 61.881 60.000 4.26 0.00 36.17 4.17
134 135 2.568090 GGTCTGCCATTGGTTGCG 59.432 61.111 4.26 0.00 34.09 4.85
135 136 2.568090 GTCTGCCATTGGTTGCGG 59.432 61.111 4.26 0.00 35.14 5.69
136 137 2.115052 TCTGCCATTGGTTGCGGT 59.885 55.556 4.26 0.00 35.35 5.68
137 138 2.259204 CTGCCATTGGTTGCGGTG 59.741 61.111 4.26 0.00 0.00 4.94
138 139 3.919973 CTGCCATTGGTTGCGGTGC 62.920 63.158 4.26 0.00 0.00 5.01
139 140 3.683937 GCCATTGGTTGCGGTGCT 61.684 61.111 4.26 0.00 0.00 4.40
140 141 2.568090 CCATTGGTTGCGGTGCTC 59.432 61.111 0.00 0.00 0.00 4.26
141 142 1.973281 CCATTGGTTGCGGTGCTCT 60.973 57.895 0.00 0.00 0.00 4.09
142 143 1.210931 CATTGGTTGCGGTGCTCTG 59.789 57.895 0.00 0.00 0.00 3.35
143 144 1.973281 ATTGGTTGCGGTGCTCTGG 60.973 57.895 0.00 0.00 0.00 3.86
144 145 4.641645 TGGTTGCGGTGCTCTGGG 62.642 66.667 0.00 0.00 0.00 4.45
151 152 4.314440 GGTGCTCTGGGCGTGTGA 62.314 66.667 0.00 0.00 45.43 3.58
152 153 2.280797 GTGCTCTGGGCGTGTGAA 60.281 61.111 0.00 0.00 45.43 3.18
153 154 1.891919 GTGCTCTGGGCGTGTGAAA 60.892 57.895 0.00 0.00 45.43 2.69
154 155 1.597854 TGCTCTGGGCGTGTGAAAG 60.598 57.895 0.00 0.00 45.43 2.62
155 156 1.301716 GCTCTGGGCGTGTGAAAGA 60.302 57.895 0.00 0.00 0.00 2.52
156 157 1.569479 GCTCTGGGCGTGTGAAAGAC 61.569 60.000 0.00 0.00 0.00 3.01
164 165 3.908737 GTGTGAAAGACGCTAGGGT 57.091 52.632 12.95 12.95 31.83 4.34
166 167 3.521947 GTGTGAAAGACGCTAGGGTAT 57.478 47.619 13.07 6.87 31.83 2.73
167 168 3.858247 GTGTGAAAGACGCTAGGGTATT 58.142 45.455 13.07 13.30 31.83 1.89
168 169 4.251268 GTGTGAAAGACGCTAGGGTATTT 58.749 43.478 26.64 26.64 34.32 1.40
169 170 4.329256 GTGTGAAAGACGCTAGGGTATTTC 59.671 45.833 35.02 35.02 44.34 2.17
171 172 4.501071 TGAAAGACGCTAGGGTATTTCAC 58.499 43.478 37.98 24.90 46.92 3.18
172 173 2.865343 AGACGCTAGGGTATTTCACG 57.135 50.000 13.07 0.00 0.00 4.35
173 174 2.372264 AGACGCTAGGGTATTTCACGA 58.628 47.619 13.07 0.00 0.00 4.35
174 175 2.098770 AGACGCTAGGGTATTTCACGAC 59.901 50.000 13.07 0.00 0.00 4.34
175 176 1.820519 ACGCTAGGGTATTTCACGACA 59.179 47.619 11.28 0.00 0.00 4.35
176 177 2.429610 ACGCTAGGGTATTTCACGACAT 59.570 45.455 11.28 0.00 0.00 3.06
177 178 3.050619 CGCTAGGGTATTTCACGACATC 58.949 50.000 0.00 0.00 0.00 3.06
178 179 3.391049 GCTAGGGTATTTCACGACATCC 58.609 50.000 0.00 0.00 0.00 3.51
179 180 3.802675 GCTAGGGTATTTCACGACATCCC 60.803 52.174 0.00 0.00 0.00 3.85
180 181 1.138266 AGGGTATTTCACGACATCCCG 59.862 52.381 0.00 0.00 38.52 5.14
181 182 1.134610 GGGTATTTCACGACATCCCGT 60.135 52.381 0.00 0.00 44.43 5.28
182 183 2.624636 GGTATTTCACGACATCCCGTT 58.375 47.619 0.00 0.00 41.29 4.44
183 184 3.004862 GGTATTTCACGACATCCCGTTT 58.995 45.455 0.00 0.00 41.29 3.60
184 185 3.181514 GGTATTTCACGACATCCCGTTTG 60.182 47.826 0.00 0.00 41.29 2.93
185 186 0.589223 TTTCACGACATCCCGTTTGC 59.411 50.000 0.00 0.00 41.29 3.68
186 187 0.250124 TTCACGACATCCCGTTTGCT 60.250 50.000 0.00 0.00 41.29 3.91
187 188 0.604073 TCACGACATCCCGTTTGCTA 59.396 50.000 0.00 0.00 41.29 3.49
188 189 0.719465 CACGACATCCCGTTTGCTAC 59.281 55.000 0.00 0.00 41.29 3.58
189 190 0.606604 ACGACATCCCGTTTGCTACT 59.393 50.000 0.00 0.00 40.17 2.57
190 191 0.999406 CGACATCCCGTTTGCTACTG 59.001 55.000 0.00 0.00 0.00 2.74
191 192 1.403647 CGACATCCCGTTTGCTACTGA 60.404 52.381 0.00 0.00 0.00 3.41
192 193 2.738643 CGACATCCCGTTTGCTACTGAT 60.739 50.000 0.00 0.00 0.00 2.90
193 194 3.490249 CGACATCCCGTTTGCTACTGATA 60.490 47.826 0.00 0.00 0.00 2.15
194 195 4.051922 GACATCCCGTTTGCTACTGATAG 58.948 47.826 0.00 0.00 0.00 2.08
195 196 3.451178 ACATCCCGTTTGCTACTGATAGT 59.549 43.478 0.00 0.00 0.00 2.12
196 197 3.795623 TCCCGTTTGCTACTGATAGTC 57.204 47.619 0.00 0.00 0.00 2.59
197 198 2.098607 TCCCGTTTGCTACTGATAGTCG 59.901 50.000 0.00 0.00 0.00 4.18
198 199 1.852895 CCGTTTGCTACTGATAGTCGC 59.147 52.381 0.00 0.00 37.42 5.19
199 200 1.852895 CGTTTGCTACTGATAGTCGCC 59.147 52.381 3.49 0.00 36.22 5.54
200 201 2.734175 CGTTTGCTACTGATAGTCGCCA 60.734 50.000 3.49 0.00 36.22 5.69
201 202 2.579207 TTGCTACTGATAGTCGCCAC 57.421 50.000 3.49 0.00 36.22 5.01
202 203 1.763968 TGCTACTGATAGTCGCCACT 58.236 50.000 3.49 0.00 36.22 4.00
203 204 1.676529 TGCTACTGATAGTCGCCACTC 59.323 52.381 0.00 0.00 36.22 3.51
204 205 1.676529 GCTACTGATAGTCGCCACTCA 59.323 52.381 0.00 0.00 31.50 3.41
205 206 2.541999 GCTACTGATAGTCGCCACTCAC 60.542 54.545 0.00 0.00 31.50 3.51
206 207 0.452184 ACTGATAGTCGCCACTCACG 59.548 55.000 0.00 0.00 33.62 4.35
207 208 0.452184 CTGATAGTCGCCACTCACGT 59.548 55.000 0.00 0.00 33.62 4.49
208 209 0.885879 TGATAGTCGCCACTCACGTT 59.114 50.000 0.00 0.00 33.62 3.99
209 210 2.086094 TGATAGTCGCCACTCACGTTA 58.914 47.619 0.00 0.00 33.62 3.18
210 211 2.686405 TGATAGTCGCCACTCACGTTAT 59.314 45.455 0.00 0.00 33.62 1.89
211 212 3.129813 TGATAGTCGCCACTCACGTTATT 59.870 43.478 0.00 0.00 33.62 1.40
212 213 2.450609 AGTCGCCACTCACGTTATTT 57.549 45.000 0.00 0.00 0.00 1.40
213 214 2.066262 AGTCGCCACTCACGTTATTTG 58.934 47.619 0.00 0.00 0.00 2.32
214 215 2.063266 GTCGCCACTCACGTTATTTGA 58.937 47.619 0.00 0.00 0.00 2.69
215 216 2.671396 GTCGCCACTCACGTTATTTGAT 59.329 45.455 0.00 0.00 0.00 2.57
216 217 2.670905 TCGCCACTCACGTTATTTGATG 59.329 45.455 0.00 0.00 0.00 3.07
217 218 2.415168 CGCCACTCACGTTATTTGATGT 59.585 45.455 0.00 0.00 0.00 3.06
218 219 3.483574 CGCCACTCACGTTATTTGATGTC 60.484 47.826 0.00 0.00 0.00 3.06
219 220 3.483574 GCCACTCACGTTATTTGATGTCG 60.484 47.826 0.00 0.00 0.00 4.35
220 221 3.924073 CCACTCACGTTATTTGATGTCGA 59.076 43.478 0.00 0.00 0.00 4.20
221 222 4.566759 CCACTCACGTTATTTGATGTCGAT 59.433 41.667 0.00 0.00 0.00 3.59
222 223 5.484085 CACTCACGTTATTTGATGTCGATG 58.516 41.667 0.00 0.00 0.00 3.84
223 224 4.032900 ACTCACGTTATTTGATGTCGATGC 59.967 41.667 0.00 0.00 0.00 3.91
224 225 3.308595 TCACGTTATTTGATGTCGATGCC 59.691 43.478 0.00 0.00 0.00 4.40
225 226 2.612212 ACGTTATTTGATGTCGATGCCC 59.388 45.455 0.00 0.00 0.00 5.36
226 227 2.872245 CGTTATTTGATGTCGATGCCCT 59.128 45.455 0.00 0.00 0.00 5.19
227 228 3.059597 CGTTATTTGATGTCGATGCCCTC 60.060 47.826 0.00 0.00 0.00 4.30
228 229 1.972872 ATTTGATGTCGATGCCCTCC 58.027 50.000 0.00 0.00 0.00 4.30
229 230 0.911769 TTTGATGTCGATGCCCTCCT 59.088 50.000 0.00 0.00 0.00 3.69
230 231 0.465705 TTGATGTCGATGCCCTCCTC 59.534 55.000 0.00 0.00 0.00 3.71
231 232 1.369321 GATGTCGATGCCCTCCTCC 59.631 63.158 0.00 0.00 0.00 4.30
232 233 2.427540 GATGTCGATGCCCTCCTCCG 62.428 65.000 0.00 0.00 0.00 4.63
233 234 2.833582 GTCGATGCCCTCCTCCGA 60.834 66.667 0.00 0.00 0.00 4.55
234 235 2.519541 TCGATGCCCTCCTCCGAG 60.520 66.667 0.00 0.00 35.72 4.63
243 244 2.346597 CTCCTCCGAGGATAGTGCC 58.653 63.158 17.80 0.00 44.81 5.01
244 245 1.519751 CTCCTCCGAGGATAGTGCCG 61.520 65.000 17.80 0.45 44.81 5.69
245 246 2.336809 CTCCGAGGATAGTGCCGC 59.663 66.667 0.00 0.00 0.00 6.53
246 247 2.123854 TCCGAGGATAGTGCCGCT 60.124 61.111 0.00 0.00 0.00 5.52
247 248 2.136196 CTCCGAGGATAGTGCCGCTC 62.136 65.000 0.00 0.00 0.00 5.03
248 249 2.050895 CGAGGATAGTGCCGCTCG 60.051 66.667 0.00 0.00 0.00 5.03
249 250 2.835705 CGAGGATAGTGCCGCTCGT 61.836 63.158 0.00 0.00 0.00 4.18
250 251 1.299468 GAGGATAGTGCCGCTCGTG 60.299 63.158 0.00 0.00 0.00 4.35
251 252 2.962253 GGATAGTGCCGCTCGTGC 60.962 66.667 0.00 0.00 0.00 5.34
252 253 2.105128 GATAGTGCCGCTCGTGCT 59.895 61.111 7.97 0.00 36.97 4.40
253 254 1.946650 GATAGTGCCGCTCGTGCTC 60.947 63.158 7.97 0.06 36.97 4.26
254 255 2.343163 GATAGTGCCGCTCGTGCTCT 62.343 60.000 7.97 10.37 36.59 4.09
255 256 2.343163 ATAGTGCCGCTCGTGCTCTC 62.343 60.000 7.97 0.97 34.65 3.20
256 257 4.724602 GTGCCGCTCGTGCTCTCA 62.725 66.667 7.97 0.00 36.97 3.27
257 258 3.989787 TGCCGCTCGTGCTCTCAA 61.990 61.111 7.97 0.00 36.97 3.02
258 259 2.510238 GCCGCTCGTGCTCTCAAT 60.510 61.111 7.97 0.00 36.97 2.57
259 260 2.806856 GCCGCTCGTGCTCTCAATG 61.807 63.158 7.97 0.00 36.97 2.82
260 261 1.446792 CCGCTCGTGCTCTCAATGT 60.447 57.895 7.97 0.00 36.97 2.71
261 262 1.016130 CCGCTCGTGCTCTCAATGTT 61.016 55.000 7.97 0.00 36.97 2.71
262 263 0.792640 CGCTCGTGCTCTCAATGTTT 59.207 50.000 7.97 0.00 36.97 2.83
263 264 1.463034 CGCTCGTGCTCTCAATGTTTG 60.463 52.381 7.97 0.00 36.97 2.93
264 265 1.135859 GCTCGTGCTCTCAATGTTTGG 60.136 52.381 1.41 0.00 36.03 3.28
265 266 1.466167 CTCGTGCTCTCAATGTTTGGG 59.534 52.381 0.00 0.00 0.00 4.12
266 267 1.202758 TCGTGCTCTCAATGTTTGGGT 60.203 47.619 0.00 0.00 31.46 4.51
267 268 1.608590 CGTGCTCTCAATGTTTGGGTT 59.391 47.619 0.00 0.00 31.46 4.11
268 269 2.350772 CGTGCTCTCAATGTTTGGGTTC 60.351 50.000 0.00 0.00 31.46 3.62
269 270 2.622942 GTGCTCTCAATGTTTGGGTTCA 59.377 45.455 0.00 0.00 31.46 3.18
496 497 4.415783 GGCTCCACCGACCAAAAT 57.584 55.556 0.00 0.00 0.00 1.82
532 533 2.059541 AGTTCTTTCGTCTACGCAAGC 58.940 47.619 9.55 0.00 41.20 4.01
574 575 1.735571 CAACGGGATTCACGGGTTTAG 59.264 52.381 13.70 0.00 35.23 1.85
595 596 0.734889 CCTGGGCTACATTTCGCAAG 59.265 55.000 0.00 0.00 0.00 4.01
635 636 4.166011 GAGGCGCGGTCAATGTGC 62.166 66.667 8.83 0.00 41.98 4.57
652 653 3.545481 CGCGCGTGCCTTCTGTAG 61.545 66.667 24.19 0.00 38.08 2.74
694 695 7.062956 ACAAAGAAAAACACCGAGAAACAAATC 59.937 33.333 0.00 0.00 0.00 2.17
715 732 9.615295 CAAATCCAAACCAATGAATTCATTTTC 57.385 29.630 27.30 0.00 43.48 2.29
738 755 6.680810 TCTTTTTGTCATAGTTTGGCATGAG 58.319 36.000 0.00 0.00 40.31 2.90
789 832 2.990066 ACCCAGATCGGAGATTTGTC 57.010 50.000 5.32 0.00 45.12 3.18
790 833 1.486726 ACCCAGATCGGAGATTTGTCC 59.513 52.381 5.32 0.00 45.12 4.02
791 834 1.202698 CCCAGATCGGAGATTTGTCCC 60.203 57.143 5.32 0.00 45.12 4.46
792 835 1.765314 CCAGATCGGAGATTTGTCCCT 59.235 52.381 0.00 0.00 45.12 4.20
793 836 2.224161 CCAGATCGGAGATTTGTCCCTC 60.224 54.545 0.00 0.00 45.12 4.30
794 837 2.697751 CAGATCGGAGATTTGTCCCTCT 59.302 50.000 0.00 0.00 45.12 3.69
795 838 2.962421 AGATCGGAGATTTGTCCCTCTC 59.038 50.000 0.00 0.00 45.12 3.20
853 896 2.295885 GCTGGAGACCAAATCTGATGG 58.704 52.381 0.00 0.00 43.84 3.51
859 902 0.680921 ACCAAATCTGATGGCACCCG 60.681 55.000 0.00 0.00 41.89 5.28
925 968 4.622220 GCCTGTGTCTTAAGATCGGGTAAA 60.622 45.833 25.58 4.77 33.22 2.01
926 969 4.868734 CCTGTGTCTTAAGATCGGGTAAAC 59.131 45.833 20.90 4.86 0.00 2.01
929 972 6.469410 TGTGTCTTAAGATCGGGTAAACAAT 58.531 36.000 8.75 0.00 0.00 2.71
930 973 6.938030 TGTGTCTTAAGATCGGGTAAACAATT 59.062 34.615 8.75 0.00 0.00 2.32
932 975 8.938906 GTGTCTTAAGATCGGGTAAACAATTAA 58.061 33.333 8.75 0.00 0.00 1.40
1061 1120 4.168291 CTCTTCGGGGCTCCAGGC 62.168 72.222 1.96 0.00 40.90 4.85
1084 1143 1.758514 TCTCCAGCCCAGATCGACC 60.759 63.158 0.00 0.00 0.00 4.79
1085 1144 3.144120 CTCCAGCCCAGATCGACCG 62.144 68.421 0.00 0.00 0.00 4.79
1274 1347 0.198696 TTTTCCCCTTCTCCCCTCCT 59.801 55.000 0.00 0.00 0.00 3.69
1275 1348 0.198696 TTTCCCCTTCTCCCCTCCTT 59.801 55.000 0.00 0.00 0.00 3.36
1276 1349 0.253207 TTCCCCTTCTCCCCTCCTTC 60.253 60.000 0.00 0.00 0.00 3.46
1279 1352 1.694525 CCTTCTCCCCTCCTTCCCC 60.695 68.421 0.00 0.00 0.00 4.81
1349 1422 1.209127 CTCGCGCCGGTTTTGAAAT 59.791 52.632 1.90 0.00 0.00 2.17
1350 1423 0.793104 CTCGCGCCGGTTTTGAAATC 60.793 55.000 1.90 0.00 0.00 2.17
1351 1424 2.143458 CGCGCCGGTTTTGAAATCG 61.143 57.895 1.90 2.28 41.92 3.34
1355 1428 4.880899 CGGTTTTGAAATCGGGGC 57.119 55.556 1.33 0.00 38.77 5.80
1356 1429 1.154112 CGGTTTTGAAATCGGGGCG 60.154 57.895 1.33 0.00 38.77 6.13
1357 1430 1.858372 CGGTTTTGAAATCGGGGCGT 61.858 55.000 1.33 0.00 38.77 5.68
1359 1432 1.269883 GGTTTTGAAATCGGGGCGTTT 60.270 47.619 0.00 0.00 0.00 3.60
1360 1433 2.055838 GTTTTGAAATCGGGGCGTTTC 58.944 47.619 0.00 0.00 35.45 2.78
1361 1434 1.611519 TTTGAAATCGGGGCGTTTCT 58.388 45.000 0.00 0.00 35.80 2.52
1362 1435 1.161843 TTGAAATCGGGGCGTTTCTC 58.838 50.000 0.00 0.00 35.80 2.87
1488 1563 4.986708 GGCGGCCTGGTTTGGGAA 62.987 66.667 12.87 0.00 0.00 3.97
1493 1568 2.052104 GCCTGGTTTGGGAATCCGG 61.052 63.158 0.00 0.00 35.24 5.14
1494 1569 2.052104 CCTGGTTTGGGAATCCGGC 61.052 63.158 0.00 0.00 35.24 6.13
1500 1575 2.700407 TTTGGGAATCCGGCGGTGTT 62.700 55.000 27.32 21.25 35.24 3.32
1503 1578 2.178273 GAATCCGGCGGTGTTTGC 59.822 61.111 27.32 7.67 0.00 3.68
1504 1579 3.661025 GAATCCGGCGGTGTTTGCG 62.661 63.158 27.32 0.00 0.00 4.85
1510 1585 4.659874 GCGGTGTTTGCGTCGTGG 62.660 66.667 0.00 0.00 0.00 4.94
1521 1604 4.796231 GTCGTGGGATGCGTCGCT 62.796 66.667 21.99 3.67 38.09 4.93
1533 1616 2.351276 GTCGCTGGGTCAATGGGT 59.649 61.111 0.00 0.00 0.00 4.51
1584 1667 2.508663 GGAACTAGTGCGGTCGGC 60.509 66.667 0.00 0.00 43.96 5.54
1647 1730 1.448717 GTGCTCTTCCTCGGGCTTC 60.449 63.158 0.00 0.00 0.00 3.86
1658 1750 3.050275 GGGCTTCAGTCGGTGTGC 61.050 66.667 0.00 0.00 0.00 4.57
1708 1800 1.657804 AGGGGTTGTCTTCCTACTGG 58.342 55.000 0.00 0.00 0.00 4.00
1722 1814 3.767131 TCCTACTGGTTCATGAATCGTGA 59.233 43.478 19.65 0.22 34.23 4.35
1762 1854 0.248843 CTCTGCTGTTCCAGGTCTCC 59.751 60.000 0.00 0.00 33.64 3.71
1888 1980 3.520290 TCAGCTACAATCCAAGGTACG 57.480 47.619 0.00 0.00 0.00 3.67
1893 1985 0.035439 ACAATCCAAGGTACGGCAGG 60.035 55.000 0.00 0.00 0.00 4.85
1897 1989 4.388499 CAAGGTACGGCAGGGCGT 62.388 66.667 23.93 23.93 0.00 5.68
1941 2033 2.123589 TGAGTTTTCTCCACAGGGACA 58.876 47.619 0.00 0.00 45.63 4.02
1955 2049 5.046591 CCACAGGGACATGTAACTAAGAAGA 60.047 44.000 0.00 0.00 35.59 2.87
2040 2134 3.130633 CAACGATCCAGTGTTGAGAACA 58.869 45.455 5.55 0.00 46.45 3.18
2069 2163 5.588648 AGGTGAAAGTCGAACTGATTTTGAA 59.411 36.000 0.00 0.00 36.73 2.69
2095 2189 5.102313 GCACTTCACAAGCTAACTTTTGTT 58.898 37.500 0.00 0.00 45.76 2.83
2103 2197 7.971722 TCACAAGCTAACTTTTGTTTTTACTCC 59.028 33.333 0.00 0.00 43.32 3.85
2116 2210 5.163774 TGTTTTTACTCCGTTTTAACACGCT 60.164 36.000 8.63 0.00 38.93 5.07
2120 2214 3.656559 ACTCCGTTTTAACACGCTATGT 58.343 40.909 8.63 2.11 46.42 2.29
2179 2273 5.946377 ACCTGGTATTCTTGGAAACATCTTC 59.054 40.000 0.00 0.00 42.32 2.87
2224 2318 4.797471 TGAAGCAAGCACACATTCATTAC 58.203 39.130 0.00 0.00 0.00 1.89
2232 2326 3.126171 GCACACATTCATTACGCTTACCA 59.874 43.478 0.00 0.00 0.00 3.25
2233 2327 4.727734 GCACACATTCATTACGCTTACCAG 60.728 45.833 0.00 0.00 0.00 4.00
2241 2335 1.848652 TACGCTTACCAGGAGCTTCT 58.151 50.000 0.00 0.00 37.99 2.85
2256 2350 4.125703 GAGCTTCTGTTCTGATGGTATGG 58.874 47.826 0.00 0.00 0.00 2.74
2259 2353 4.521146 CTTCTGTTCTGATGGTATGGCTT 58.479 43.478 0.00 0.00 0.00 4.35
2260 2354 4.142609 TCTGTTCTGATGGTATGGCTTC 57.857 45.455 0.00 0.00 0.00 3.86
2267 2361 6.692849 TCTGATGGTATGGCTTCATAATCT 57.307 37.500 0.00 0.00 35.38 2.40
2483 2578 8.355169 CCAGTACATGAAGATCAATAATTTGGG 58.645 37.037 0.00 0.00 33.44 4.12
2830 2933 2.571212 TCATTTGACGACCTGTTGCTT 58.429 42.857 0.00 0.00 0.00 3.91
2834 2937 4.966965 TTTGACGACCTGTTGCTTTTTA 57.033 36.364 0.00 0.00 0.00 1.52
2860 2963 2.229792 GACACAGTGCTGGAATTGGAA 58.770 47.619 0.00 0.00 34.19 3.53
2866 2969 4.344679 ACAGTGCTGGAATTGGAATTTCAA 59.655 37.500 0.54 0.54 33.66 2.69
2920 3023 7.273381 CACGTAAAGCATTTTCCCTTCATAAAG 59.727 37.037 0.00 0.00 40.09 1.85
2928 3031 7.064966 GCATTTTCCCTTCATAAAGTTTGGATG 59.935 37.037 0.00 0.00 0.00 3.51
2940 3043 9.426837 CATAAAGTTTGGATGTGTCATGATTTT 57.573 29.630 0.00 0.00 0.00 1.82
2947 3050 7.943079 TGGATGTGTCATGATTTTACATCTT 57.057 32.000 26.44 9.31 44.23 2.40
2968 3071 9.831737 CATCTTTTAACGATTCTCACATTTCTT 57.168 29.630 0.00 0.00 0.00 2.52
3030 3133 2.098117 GTCAAAACTTGCTGCTGACACT 59.902 45.455 11.22 0.00 37.07 3.55
3070 3173 4.998672 AGGTATACGAGCTAGCTACTCAAG 59.001 45.833 19.38 7.65 32.80 3.02
3083 3186 3.196685 GCTACTCAAGACAATGTCCTCCT 59.803 47.826 10.12 0.00 32.18 3.69
3268 3405 4.762251 GGAAAAACTGTCATTAGTCAGGCT 59.238 41.667 0.00 0.00 35.58 4.58
3348 3485 4.644685 GCTCAGGATGTTGGCCTTTAAATA 59.355 41.667 3.32 0.00 37.40 1.40
3529 3668 6.115446 AGAGTCAGTCATGAAAAGAACAACA 58.885 36.000 0.00 0.00 37.14 3.33
3646 3788 8.475639 CCTAGTATTCTACTGTTAAAGGCTTGA 58.524 37.037 0.00 0.00 39.81 3.02
3672 3814 6.043706 AGGCATGCCTTTCTATCTTACATAGT 59.956 38.462 34.07 4.89 45.70 2.12
3785 3927 3.327172 TGGTTTCCCCGTTTGTATCTACA 59.673 43.478 0.00 0.00 35.15 2.74
4037 4180 7.291416 AGTTTGGTTTATTATGGGAACTTGGTT 59.709 33.333 0.00 0.00 0.00 3.67
4173 4317 7.935338 ATGAACAAGACAATCATGTGTTTTC 57.065 32.000 0.00 0.00 39.82 2.29
4179 4323 2.899256 ACAATCATGTGTTTTCCCCCTG 59.101 45.455 0.00 0.00 38.69 4.45
4322 4466 0.674895 CTTCCTTCCGTGGCTTCCAG 60.675 60.000 0.00 0.00 32.34 3.86
4338 4482 5.360999 GGCTTCCAGTTTCTATTTATTGCCT 59.639 40.000 0.00 0.00 0.00 4.75
4390 4534 2.926200 GCTGTATATATGCTCTGGTGCG 59.074 50.000 2.37 0.00 35.36 5.34
4435 4579 8.833231 TTGATTTCTAAAGTTCCTGACTAGTG 57.167 34.615 0.00 0.00 37.72 2.74
4532 4676 5.106157 CCCCTTAACTAAGCTTGTTGACATG 60.106 44.000 9.86 0.00 32.02 3.21
4716 4880 2.900122 GCACACATGCGTTGATTACT 57.100 45.000 0.00 0.00 43.33 2.24
4835 5000 1.066430 TCACGGTTGGCATCCTTCTAC 60.066 52.381 12.54 0.00 0.00 2.59
4853 5018 1.597027 CGAACGTGCTGGGAAGGTT 60.597 57.895 0.00 0.00 0.00 3.50
4985 5150 2.423577 CAGGTAAGGAAACTGTTCGGG 58.576 52.381 0.00 0.00 42.68 5.14
4989 5154 3.244181 GGTAAGGAAACTGTTCGGGTACA 60.244 47.826 0.00 0.00 42.68 2.90
5035 5208 5.647658 TCCATTGCTTTGTTACTATCAGGTG 59.352 40.000 0.00 0.00 0.00 4.00
5162 5335 4.081254 ACTCCACGGTTATTCCCTAACTTC 60.081 45.833 0.00 0.00 39.78 3.01
5213 5386 3.756963 TGCTCTCTGTTGTACTGACGTAT 59.243 43.478 0.00 0.00 0.00 3.06
5355 5528 6.093633 GTCCAGGTATTCATGTTTACCTTGTC 59.906 42.308 20.00 13.69 44.60 3.18
5465 5638 4.320608 TTGGTGCTTTTGTTTCCTGATC 57.679 40.909 0.00 0.00 0.00 2.92
5534 5707 9.453572 AATGAATTGCTCTTCAATCTGTACTTA 57.546 29.630 5.77 0.00 44.23 2.24
5935 6111 5.619981 GCGAATCAGGTAATTGCACTTTCTT 60.620 40.000 0.00 0.00 0.00 2.52
5941 6117 5.010012 CAGGTAATTGCACTTTCTTTGACCT 59.990 40.000 0.00 0.00 33.89 3.85
5989 6165 4.164822 AGATTGCACAAACAGCATACAC 57.835 40.909 0.00 0.00 42.33 2.90
6021 6197 8.324163 ACTTGGAAGTATGTATCTTTGAACAC 57.676 34.615 0.00 0.00 37.52 3.32
6110 6286 5.634118 TCTAGGGGATTATTGCAGAAATGG 58.366 41.667 0.74 0.00 0.00 3.16
6211 6388 4.910458 ACTGCTAGTTGTATTTGACCCT 57.090 40.909 0.00 0.00 0.00 4.34
6262 6440 1.076705 GCCCAGGTCAAAGGGGATC 60.077 63.158 0.00 0.00 45.08 3.36
6279 6457 4.646492 GGGGATCTCAGTTTAACTACCGTA 59.354 45.833 0.00 0.00 0.00 4.02
6283 6461 8.583296 GGGATCTCAGTTTAACTACCGTATAAT 58.417 37.037 0.00 0.00 0.00 1.28
6316 6494 4.009675 GCATTCAGTCATTCACCTAACCA 58.990 43.478 0.00 0.00 0.00 3.67
6318 6496 5.822519 GCATTCAGTCATTCACCTAACCATA 59.177 40.000 0.00 0.00 0.00 2.74
6341 6519 3.951680 GTCTGTTTGACTTTTCTTCCCCA 59.048 43.478 0.00 0.00 42.21 4.96
6427 6614 3.758755 TGACAACTTGATGAGCAGACT 57.241 42.857 0.00 0.00 0.00 3.24
6429 6616 5.213891 TGACAACTTGATGAGCAGACTTA 57.786 39.130 0.00 0.00 0.00 2.24
6668 6868 7.290014 ACTTGGATGTTTAGGGAAAAAGAATGT 59.710 33.333 0.00 0.00 0.00 2.71
6669 6869 6.991938 TGGATGTTTAGGGAAAAAGAATGTG 58.008 36.000 0.00 0.00 0.00 3.21
6803 7167 9.752961 CATCATAAAGGAAATATGCAAACATGA 57.247 29.630 0.00 0.00 37.04 3.07
6822 7187 6.064717 ACATGAGAGTTTGCTTCTTAACCTT 58.935 36.000 0.00 0.00 0.00 3.50
6823 7188 7.224297 ACATGAGAGTTTGCTTCTTAACCTTA 58.776 34.615 0.00 0.00 0.00 2.69
6824 7189 7.719633 ACATGAGAGTTTGCTTCTTAACCTTAA 59.280 33.333 0.00 0.00 0.00 1.85
6825 7190 8.734386 CATGAGAGTTTGCTTCTTAACCTTAAT 58.266 33.333 0.00 0.00 0.00 1.40
6890 7255 6.347969 CCAATGCTGATGGACATAAGATAACG 60.348 42.308 0.70 0.00 40.56 3.18
6900 7265 5.239359 ACATAAGATAACGTACGCTGTCA 57.761 39.130 16.72 0.00 0.00 3.58
6950 7315 3.244630 ACCGCCTTGTGTAAGTATTCCAA 60.245 43.478 0.00 0.00 31.80 3.53
6951 7316 3.374058 CCGCCTTGTGTAAGTATTCCAAG 59.626 47.826 0.00 0.00 31.92 3.61
6952 7317 4.000988 CGCCTTGTGTAAGTATTCCAAGT 58.999 43.478 0.00 0.00 30.87 3.16
6985 7350 9.928618 TCAAATTGATACTTATTGGGTATTCCA 57.071 29.630 0.00 0.00 45.43 3.53
7325 7696 3.617263 AGATGCGAATTACGTTTCAGGAC 59.383 43.478 0.00 0.00 44.60 3.85
7362 7733 0.744281 TTGCGACAGACAGACAGACA 59.256 50.000 0.00 0.00 0.00 3.41
7363 7734 0.312102 TGCGACAGACAGACAGACAG 59.688 55.000 0.00 0.00 0.00 3.51
7364 7735 1.006314 GCGACAGACAGACAGACAGC 61.006 60.000 0.00 0.00 0.00 4.40
7365 7736 0.387878 CGACAGACAGACAGACAGCC 60.388 60.000 0.00 0.00 0.00 4.85
7491 7862 2.279741 CACCGGTGGACATGTTCATAG 58.720 52.381 27.57 7.43 0.00 2.23
7587 7958 0.755079 CCATCATTCTCCCGCTCTGA 59.245 55.000 0.00 0.00 0.00 3.27
7588 7959 1.347050 CCATCATTCTCCCGCTCTGAT 59.653 52.381 0.00 0.00 0.00 2.90
7599 7970 2.767536 GCTCTGATTTGCGGCAGTA 58.232 52.632 1.67 0.00 33.90 2.74
7607 7978 4.980590 TGATTTGCGGCAGTACTATTTTG 58.019 39.130 1.67 0.00 0.00 2.44
7621 7992 7.803189 CAGTACTATTTTGTGCTTTGTCGATTT 59.197 33.333 0.00 0.00 30.70 2.17
7728 8286 8.736244 GGTAGGAACAAAAAGTCAGCATTTATA 58.264 33.333 0.00 0.00 0.00 0.98
7731 8289 9.643693 AGGAACAAAAAGTCAGCATTTATATTG 57.356 29.630 0.00 0.00 0.00 1.90
7732 8290 9.423061 GGAACAAAAAGTCAGCATTTATATTGT 57.577 29.630 0.00 0.00 0.00 2.71
7735 8293 9.762933 ACAAAAAGTCAGCATTTATATTGTTGT 57.237 25.926 0.00 0.00 0.00 3.32
7794 8438 5.763204 GGTGGTGATTACTCTTGTCTTTTCA 59.237 40.000 0.00 0.00 0.00 2.69
7795 8439 6.262273 GGTGGTGATTACTCTTGTCTTTTCAA 59.738 38.462 0.00 0.00 0.00 2.69
7802 8446 3.871594 ACTCTTGTCTTTTCAACCGTCTG 59.128 43.478 0.00 0.00 0.00 3.51
7833 8477 3.877344 TTTGGACGCATGGGGTGGG 62.877 63.158 14.94 0.00 45.61 4.61
7839 8483 3.070576 GCATGGGGTGGGTCTTGC 61.071 66.667 0.00 0.00 0.00 4.01
7851 8495 1.301677 GGTCTTGCTGGGAGAAAGCG 61.302 60.000 0.00 0.00 43.88 4.68
7856 8504 1.448717 GCTGGGAGAAAGCGGAGAC 60.449 63.158 0.00 0.00 0.00 3.36
7868 8516 2.908796 GGAGACGGATGGGGGAAC 59.091 66.667 0.00 0.00 0.00 3.62
7869 8517 2.499685 GAGACGGATGGGGGAACG 59.500 66.667 0.00 0.00 0.00 3.95
7871 8519 3.078836 GACGGATGGGGGAACGGA 61.079 66.667 0.00 0.00 0.00 4.69
7872 8520 2.366435 ACGGATGGGGGAACGGAT 60.366 61.111 0.00 0.00 0.00 4.18
7873 8521 1.979619 GACGGATGGGGGAACGGATT 61.980 60.000 0.00 0.00 0.00 3.01
7874 8522 1.525995 CGGATGGGGGAACGGATTG 60.526 63.158 0.00 0.00 0.00 2.67
7875 8523 1.152756 GGATGGGGGAACGGATTGG 60.153 63.158 0.00 0.00 0.00 3.16
7876 8524 1.152756 GATGGGGGAACGGATTGGG 60.153 63.158 0.00 0.00 0.00 4.12
7877 8525 1.621205 ATGGGGGAACGGATTGGGA 60.621 57.895 0.00 0.00 0.00 4.37
7878 8526 1.645402 ATGGGGGAACGGATTGGGAG 61.645 60.000 0.00 0.00 0.00 4.30
7879 8527 2.595655 GGGGAACGGATTGGGAGG 59.404 66.667 0.00 0.00 0.00 4.30
7882 8530 3.202706 GAACGGATTGGGAGGCGC 61.203 66.667 0.00 0.00 0.00 6.53
7883 8531 3.969250 GAACGGATTGGGAGGCGCA 62.969 63.158 10.83 0.00 0.00 6.09
7897 8545 2.203126 CGCAGCAGGGAAGGATCC 60.203 66.667 2.48 2.48 45.77 3.36
8004 8657 2.258726 GCCGGAAGCCACTTTCGTT 61.259 57.895 5.05 0.00 40.49 3.85
8028 8681 1.680989 TCCGCTGAGGATGTTCCGA 60.681 57.895 0.00 0.00 45.98 4.55
8029 8682 1.227089 CCGCTGAGGATGTTCCGAG 60.227 63.158 0.00 0.00 42.75 4.63
8051 8704 1.000521 ATGTGCACACCCATCCAGG 60.001 57.895 24.37 0.00 37.03 4.45
8111 8764 5.559632 CAGCACTGTTTTTGTTTTTGTTTCG 59.440 36.000 0.00 0.00 0.00 3.46
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.128172 GGTGAGATATAAATTGGGCTGAATCG 60.128 42.308 0.00 0.00 0.00 3.34
1 2 6.716628 TGGTGAGATATAAATTGGGCTGAATC 59.283 38.462 0.00 0.00 0.00 2.52
2 3 6.613699 TGGTGAGATATAAATTGGGCTGAAT 58.386 36.000 0.00 0.00 0.00 2.57
3 4 6.012337 TGGTGAGATATAAATTGGGCTGAA 57.988 37.500 0.00 0.00 0.00 3.02
4 5 5.645056 TGGTGAGATATAAATTGGGCTGA 57.355 39.130 0.00 0.00 0.00 4.26
5 6 6.507023 GTTTGGTGAGATATAAATTGGGCTG 58.493 40.000 0.00 0.00 0.00 4.85
8 9 6.238648 GGACGTTTGGTGAGATATAAATTGGG 60.239 42.308 0.00 0.00 0.00 4.12
9 10 6.317642 TGGACGTTTGGTGAGATATAAATTGG 59.682 38.462 0.00 0.00 0.00 3.16
10 11 7.148323 TGTGGACGTTTGGTGAGATATAAATTG 60.148 37.037 0.00 0.00 0.00 2.32
11 12 6.882140 TGTGGACGTTTGGTGAGATATAAATT 59.118 34.615 0.00 0.00 0.00 1.82
12 13 6.315393 GTGTGGACGTTTGGTGAGATATAAAT 59.685 38.462 0.00 0.00 0.00 1.40
13 14 5.640357 GTGTGGACGTTTGGTGAGATATAAA 59.360 40.000 0.00 0.00 0.00 1.40
14 15 5.172934 GTGTGGACGTTTGGTGAGATATAA 58.827 41.667 0.00 0.00 0.00 0.98
15 16 4.221041 TGTGTGGACGTTTGGTGAGATATA 59.779 41.667 0.00 0.00 0.00 0.86
16 17 3.007506 TGTGTGGACGTTTGGTGAGATAT 59.992 43.478 0.00 0.00 0.00 1.63
17 18 2.365941 TGTGTGGACGTTTGGTGAGATA 59.634 45.455 0.00 0.00 0.00 1.98
18 19 1.140052 TGTGTGGACGTTTGGTGAGAT 59.860 47.619 0.00 0.00 0.00 2.75
19 20 0.537653 TGTGTGGACGTTTGGTGAGA 59.462 50.000 0.00 0.00 0.00 3.27
20 21 0.655733 GTGTGTGGACGTTTGGTGAG 59.344 55.000 0.00 0.00 0.00 3.51
21 22 0.036294 TGTGTGTGGACGTTTGGTGA 60.036 50.000 0.00 0.00 0.00 4.02
22 23 0.098025 GTGTGTGTGGACGTTTGGTG 59.902 55.000 0.00 0.00 0.00 4.17
23 24 0.321741 TGTGTGTGTGGACGTTTGGT 60.322 50.000 0.00 0.00 0.00 3.67
24 25 0.376852 CTGTGTGTGTGGACGTTTGG 59.623 55.000 0.00 0.00 0.00 3.28
25 26 0.248054 GCTGTGTGTGTGGACGTTTG 60.248 55.000 0.00 0.00 0.00 2.93
26 27 1.373590 GGCTGTGTGTGTGGACGTTT 61.374 55.000 0.00 0.00 0.00 3.60
27 28 1.817941 GGCTGTGTGTGTGGACGTT 60.818 57.895 0.00 0.00 0.00 3.99
28 29 2.203015 GGCTGTGTGTGTGGACGT 60.203 61.111 0.00 0.00 0.00 4.34
29 30 1.165907 ATTGGCTGTGTGTGTGGACG 61.166 55.000 0.00 0.00 0.00 4.79
30 31 1.032014 AATTGGCTGTGTGTGTGGAC 58.968 50.000 0.00 0.00 0.00 4.02
31 32 1.774110 AAATTGGCTGTGTGTGTGGA 58.226 45.000 0.00 0.00 0.00 4.02
32 33 2.159128 TCAAAATTGGCTGTGTGTGTGG 60.159 45.455 0.00 0.00 0.00 4.17
33 34 3.162202 TCAAAATTGGCTGTGTGTGTG 57.838 42.857 0.00 0.00 0.00 3.82
34 35 4.121317 CAATCAAAATTGGCTGTGTGTGT 58.879 39.130 0.00 0.00 38.91 3.72
35 36 3.059461 GCAATCAAAATTGGCTGTGTGTG 60.059 43.478 0.79 0.00 42.18 3.82
36 37 3.132925 GCAATCAAAATTGGCTGTGTGT 58.867 40.909 0.79 0.00 42.18 3.72
37 38 2.156117 CGCAATCAAAATTGGCTGTGTG 59.844 45.455 0.79 0.00 42.18 3.82
38 39 2.224018 ACGCAATCAAAATTGGCTGTGT 60.224 40.909 8.04 8.04 42.18 3.72
39 40 2.406130 ACGCAATCAAAATTGGCTGTG 58.594 42.857 0.79 1.37 42.18 3.66
40 41 2.818130 ACGCAATCAAAATTGGCTGT 57.182 40.000 0.79 0.00 42.18 4.40
41 42 4.212911 CAAAACGCAATCAAAATTGGCTG 58.787 39.130 0.79 0.00 42.18 4.85
42 43 3.876320 ACAAAACGCAATCAAAATTGGCT 59.124 34.783 0.79 0.00 42.18 4.75
43 44 4.208074 ACAAAACGCAATCAAAATTGGC 57.792 36.364 0.79 0.00 42.18 4.52
44 45 6.533185 GGATACAAAACGCAATCAAAATTGG 58.467 36.000 0.79 0.00 42.18 3.16
45 46 6.128956 ACGGATACAAAACGCAATCAAAATTG 60.129 34.615 0.00 0.00 44.31 2.32
46 47 5.923684 ACGGATACAAAACGCAATCAAAATT 59.076 32.000 0.00 0.00 0.00 1.82
47 48 5.465935 ACGGATACAAAACGCAATCAAAAT 58.534 33.333 0.00 0.00 0.00 1.82
48 49 4.861210 ACGGATACAAAACGCAATCAAAA 58.139 34.783 0.00 0.00 0.00 2.44
49 50 4.491234 ACGGATACAAAACGCAATCAAA 57.509 36.364 0.00 0.00 0.00 2.69
50 51 4.491234 AACGGATACAAAACGCAATCAA 57.509 36.364 0.00 0.00 0.00 2.57
51 52 4.491234 AAACGGATACAAAACGCAATCA 57.509 36.364 0.00 0.00 0.00 2.57
52 53 5.815964 AAAAACGGATACAAAACGCAATC 57.184 34.783 0.00 0.00 0.00 2.67
72 73 4.555262 GCGAACCATTGGATCTTGAAAAA 58.445 39.130 10.37 0.00 0.00 1.94
73 74 3.056891 GGCGAACCATTGGATCTTGAAAA 60.057 43.478 10.37 0.00 35.26 2.29
74 75 2.491693 GGCGAACCATTGGATCTTGAAA 59.508 45.455 10.37 0.00 35.26 2.69
75 76 2.091541 GGCGAACCATTGGATCTTGAA 58.908 47.619 10.37 0.00 35.26 2.69
76 77 1.681780 GGGCGAACCATTGGATCTTGA 60.682 52.381 10.37 0.00 39.85 3.02
77 78 0.740737 GGGCGAACCATTGGATCTTG 59.259 55.000 10.37 0.00 39.85 3.02
78 79 0.395724 GGGGCGAACCATTGGATCTT 60.396 55.000 10.37 0.00 42.91 2.40
79 80 1.227383 GGGGCGAACCATTGGATCT 59.773 57.895 10.37 0.00 42.91 2.75
80 81 1.828224 GGGGGCGAACCATTGGATC 60.828 63.158 10.37 6.27 42.91 3.36
81 82 2.278738 GGGGGCGAACCATTGGAT 59.721 61.111 10.37 0.00 42.91 3.41
82 83 4.418328 CGGGGGCGAACCATTGGA 62.418 66.667 10.37 0.00 42.91 3.53
94 95 1.654023 GAATCGAAGTTTGCCGGGGG 61.654 60.000 2.18 0.00 0.00 5.40
95 96 1.654023 GGAATCGAAGTTTGCCGGGG 61.654 60.000 2.18 0.00 0.00 5.73
96 97 0.676782 AGGAATCGAAGTTTGCCGGG 60.677 55.000 2.18 0.00 0.00 5.73
97 98 0.447801 CAGGAATCGAAGTTTGCCGG 59.552 55.000 0.00 0.00 0.00 6.13
98 99 0.447801 CCAGGAATCGAAGTTTGCCG 59.552 55.000 0.00 0.00 0.00 5.69
99 100 0.811281 CCCAGGAATCGAAGTTTGCC 59.189 55.000 0.00 0.00 0.00 4.52
100 101 1.468914 GACCCAGGAATCGAAGTTTGC 59.531 52.381 0.00 0.00 0.00 3.68
101 102 2.744202 CAGACCCAGGAATCGAAGTTTG 59.256 50.000 0.00 0.00 0.00 2.93
102 103 2.876079 GCAGACCCAGGAATCGAAGTTT 60.876 50.000 0.00 0.00 0.00 2.66
103 104 1.339151 GCAGACCCAGGAATCGAAGTT 60.339 52.381 0.00 0.00 0.00 2.66
104 105 0.250513 GCAGACCCAGGAATCGAAGT 59.749 55.000 0.00 0.00 0.00 3.01
105 106 0.462759 GGCAGACCCAGGAATCGAAG 60.463 60.000 0.00 0.00 0.00 3.79
106 107 1.198094 TGGCAGACCCAGGAATCGAA 61.198 55.000 0.00 0.00 39.18 3.71
107 108 1.612146 TGGCAGACCCAGGAATCGA 60.612 57.895 0.00 0.00 39.18 3.59
108 109 2.989639 TGGCAGACCCAGGAATCG 59.010 61.111 0.00 0.00 39.18 3.34
116 117 2.973082 GCAACCAATGGCAGACCC 59.027 61.111 0.00 0.00 33.59 4.46
117 118 2.568090 CGCAACCAATGGCAGACC 59.432 61.111 0.00 0.00 0.00 3.85
118 119 2.268076 ACCGCAACCAATGGCAGAC 61.268 57.895 0.00 0.00 0.00 3.51
119 120 2.115052 ACCGCAACCAATGGCAGA 59.885 55.556 0.00 0.00 0.00 4.26
120 121 2.259204 CACCGCAACCAATGGCAG 59.741 61.111 0.00 0.00 0.00 4.85
121 122 3.988525 GCACCGCAACCAATGGCA 61.989 61.111 0.00 0.00 0.00 4.92
122 123 3.631487 GAGCACCGCAACCAATGGC 62.631 63.158 0.00 0.00 0.00 4.40
123 124 1.973281 AGAGCACCGCAACCAATGG 60.973 57.895 0.00 0.00 0.00 3.16
124 125 1.210931 CAGAGCACCGCAACCAATG 59.789 57.895 0.00 0.00 0.00 2.82
125 126 1.973281 CCAGAGCACCGCAACCAAT 60.973 57.895 0.00 0.00 0.00 3.16
126 127 2.594303 CCAGAGCACCGCAACCAA 60.594 61.111 0.00 0.00 0.00 3.67
127 128 4.641645 CCCAGAGCACCGCAACCA 62.642 66.667 0.00 0.00 0.00 3.67
134 135 3.825160 TTCACACGCCCAGAGCACC 62.825 63.158 0.00 0.00 44.04 5.01
135 136 1.845809 CTTTCACACGCCCAGAGCAC 61.846 60.000 0.00 0.00 44.04 4.40
136 137 1.597854 CTTTCACACGCCCAGAGCA 60.598 57.895 0.00 0.00 44.04 4.26
137 138 1.301716 TCTTTCACACGCCCAGAGC 60.302 57.895 0.00 0.00 38.52 4.09
138 139 1.284982 CGTCTTTCACACGCCCAGAG 61.285 60.000 0.00 0.00 0.00 3.35
139 140 1.300620 CGTCTTTCACACGCCCAGA 60.301 57.895 0.00 0.00 0.00 3.86
140 141 3.244105 CGTCTTTCACACGCCCAG 58.756 61.111 0.00 0.00 0.00 4.45
145 146 0.038526 ACCCTAGCGTCTTTCACACG 60.039 55.000 0.00 0.00 40.35 4.49
146 147 3.521947 ATACCCTAGCGTCTTTCACAC 57.478 47.619 0.00 0.00 0.00 3.82
147 148 4.020928 TGAAATACCCTAGCGTCTTTCACA 60.021 41.667 13.95 0.00 35.28 3.58
148 149 4.329256 GTGAAATACCCTAGCGTCTTTCAC 59.671 45.833 24.10 24.10 44.95 3.18
149 150 4.501071 GTGAAATACCCTAGCGTCTTTCA 58.499 43.478 13.95 13.95 36.84 2.69
150 151 3.550678 CGTGAAATACCCTAGCGTCTTTC 59.449 47.826 10.09 10.09 32.39 2.62
151 152 3.194116 TCGTGAAATACCCTAGCGTCTTT 59.806 43.478 0.00 0.00 0.00 2.52
152 153 2.756760 TCGTGAAATACCCTAGCGTCTT 59.243 45.455 0.00 0.00 0.00 3.01
153 154 2.098770 GTCGTGAAATACCCTAGCGTCT 59.901 50.000 0.00 0.00 0.00 4.18
154 155 2.159338 TGTCGTGAAATACCCTAGCGTC 60.159 50.000 0.00 0.00 0.00 5.19
155 156 1.820519 TGTCGTGAAATACCCTAGCGT 59.179 47.619 0.00 0.00 0.00 5.07
156 157 2.572191 TGTCGTGAAATACCCTAGCG 57.428 50.000 0.00 0.00 0.00 4.26
157 158 3.391049 GGATGTCGTGAAATACCCTAGC 58.609 50.000 0.00 0.00 0.00 3.42
158 159 3.552273 CGGGATGTCGTGAAATACCCTAG 60.552 52.174 0.00 0.00 34.35 3.02
159 160 2.363038 CGGGATGTCGTGAAATACCCTA 59.637 50.000 0.00 0.00 34.35 3.53
160 161 1.138266 CGGGATGTCGTGAAATACCCT 59.862 52.381 0.00 0.00 34.35 4.34
161 162 1.134610 ACGGGATGTCGTGAAATACCC 60.135 52.381 0.00 0.00 42.21 3.69
162 163 2.304751 ACGGGATGTCGTGAAATACC 57.695 50.000 0.00 0.00 42.21 2.73
163 164 3.726782 GCAAACGGGATGTCGTGAAATAC 60.727 47.826 0.00 0.00 43.07 1.89
164 165 2.417239 GCAAACGGGATGTCGTGAAATA 59.583 45.455 0.00 0.00 43.07 1.40
165 166 1.199097 GCAAACGGGATGTCGTGAAAT 59.801 47.619 0.00 0.00 43.07 2.17
166 167 0.589223 GCAAACGGGATGTCGTGAAA 59.411 50.000 0.00 0.00 43.07 2.69
167 168 0.250124 AGCAAACGGGATGTCGTGAA 60.250 50.000 0.00 0.00 43.07 3.18
168 169 0.604073 TAGCAAACGGGATGTCGTGA 59.396 50.000 0.00 0.00 43.07 4.35
169 170 0.719465 GTAGCAAACGGGATGTCGTG 59.281 55.000 0.00 0.00 43.07 4.35
170 171 0.606604 AGTAGCAAACGGGATGTCGT 59.393 50.000 0.00 0.00 46.08 4.34
171 172 0.999406 CAGTAGCAAACGGGATGTCG 59.001 55.000 0.00 0.00 0.00 4.35
172 173 2.380084 TCAGTAGCAAACGGGATGTC 57.620 50.000 0.00 0.00 0.00 3.06
173 174 3.451178 ACTATCAGTAGCAAACGGGATGT 59.549 43.478 8.59 4.45 31.89 3.06
174 175 4.051922 GACTATCAGTAGCAAACGGGATG 58.948 47.826 8.59 0.00 31.89 3.51
175 176 3.243434 CGACTATCAGTAGCAAACGGGAT 60.243 47.826 0.00 0.00 33.41 3.85
176 177 2.098607 CGACTATCAGTAGCAAACGGGA 59.901 50.000 0.00 0.00 0.00 5.14
177 178 2.460918 CGACTATCAGTAGCAAACGGG 58.539 52.381 0.00 0.00 0.00 5.28
178 179 1.852895 GCGACTATCAGTAGCAAACGG 59.147 52.381 6.55 0.00 44.64 4.44
179 180 1.852895 GGCGACTATCAGTAGCAAACG 59.147 52.381 12.43 0.00 46.63 3.60
180 181 2.603560 GTGGCGACTATCAGTAGCAAAC 59.396 50.000 12.43 7.08 46.63 2.93
181 182 2.496070 AGTGGCGACTATCAGTAGCAAA 59.504 45.455 12.43 0.00 46.63 3.68
182 183 2.099263 GAGTGGCGACTATCAGTAGCAA 59.901 50.000 0.00 0.00 46.63 3.91
183 184 1.676529 GAGTGGCGACTATCAGTAGCA 59.323 52.381 0.00 0.00 46.63 3.49
184 185 1.676529 TGAGTGGCGACTATCAGTAGC 59.323 52.381 0.00 3.16 44.55 3.58
185 186 2.286477 CGTGAGTGGCGACTATCAGTAG 60.286 54.545 0.00 0.00 30.16 2.57
186 187 1.669265 CGTGAGTGGCGACTATCAGTA 59.331 52.381 0.00 0.00 30.16 2.74
187 188 0.452184 CGTGAGTGGCGACTATCAGT 59.548 55.000 0.00 0.00 30.16 3.41
188 189 0.452184 ACGTGAGTGGCGACTATCAG 59.548 55.000 0.00 0.00 46.97 2.90
189 190 2.563297 ACGTGAGTGGCGACTATCA 58.437 52.632 0.00 0.00 46.97 2.15
201 202 4.508971 GCATCGACATCAAATAACGTGAG 58.491 43.478 0.00 0.00 0.00 3.51
202 203 3.308595 GGCATCGACATCAAATAACGTGA 59.691 43.478 0.00 0.00 0.00 4.35
203 204 3.546020 GGGCATCGACATCAAATAACGTG 60.546 47.826 0.00 0.00 0.00 4.49
204 205 2.612212 GGGCATCGACATCAAATAACGT 59.388 45.455 0.00 0.00 0.00 3.99
205 206 2.872245 AGGGCATCGACATCAAATAACG 59.128 45.455 0.00 0.00 0.00 3.18
206 207 3.251004 GGAGGGCATCGACATCAAATAAC 59.749 47.826 0.00 0.00 0.00 1.89
207 208 3.136443 AGGAGGGCATCGACATCAAATAA 59.864 43.478 0.00 0.00 0.00 1.40
208 209 2.705658 AGGAGGGCATCGACATCAAATA 59.294 45.455 0.00 0.00 0.00 1.40
209 210 1.492176 AGGAGGGCATCGACATCAAAT 59.508 47.619 0.00 0.00 0.00 2.32
210 211 0.911769 AGGAGGGCATCGACATCAAA 59.088 50.000 0.00 0.00 0.00 2.69
211 212 0.465705 GAGGAGGGCATCGACATCAA 59.534 55.000 0.00 0.00 0.00 2.57
212 213 1.402896 GGAGGAGGGCATCGACATCA 61.403 60.000 0.00 0.00 0.00 3.07
213 214 1.369321 GGAGGAGGGCATCGACATC 59.631 63.158 0.00 0.00 0.00 3.06
214 215 2.502492 CGGAGGAGGGCATCGACAT 61.502 63.158 0.00 0.00 0.00 3.06
215 216 3.147595 CGGAGGAGGGCATCGACA 61.148 66.667 0.00 0.00 0.00 4.35
216 217 2.833582 TCGGAGGAGGGCATCGAC 60.834 66.667 0.00 0.00 0.00 4.20
217 218 2.519541 CTCGGAGGAGGGCATCGA 60.520 66.667 0.00 0.00 36.61 3.59
227 228 3.043419 CGGCACTATCCTCGGAGG 58.957 66.667 18.25 18.25 36.46 4.30
228 229 2.136196 GAGCGGCACTATCCTCGGAG 62.136 65.000 1.45 0.00 0.00 4.63
229 230 2.123854 AGCGGCACTATCCTCGGA 60.124 61.111 1.45 0.00 0.00 4.55
230 231 2.336809 GAGCGGCACTATCCTCGG 59.663 66.667 1.45 0.00 0.00 4.63
231 232 2.050895 CGAGCGGCACTATCCTCG 60.051 66.667 1.45 0.00 40.76 4.63
232 233 1.299468 CACGAGCGGCACTATCCTC 60.299 63.158 1.45 0.00 0.00 3.71
233 234 2.808315 CACGAGCGGCACTATCCT 59.192 61.111 1.45 0.00 0.00 3.24
234 235 2.962253 GCACGAGCGGCACTATCC 60.962 66.667 1.45 0.00 0.00 2.59
244 245 1.135859 CCAAACATTGAGAGCACGAGC 60.136 52.381 0.00 0.00 42.56 5.03
245 246 1.466167 CCCAAACATTGAGAGCACGAG 59.534 52.381 0.00 0.00 0.00 4.18
246 247 1.202758 ACCCAAACATTGAGAGCACGA 60.203 47.619 0.00 0.00 0.00 4.35
247 248 1.238439 ACCCAAACATTGAGAGCACG 58.762 50.000 0.00 0.00 0.00 5.34
248 249 2.622942 TGAACCCAAACATTGAGAGCAC 59.377 45.455 0.00 0.00 0.00 4.40
249 250 2.942804 TGAACCCAAACATTGAGAGCA 58.057 42.857 0.00 0.00 0.00 4.26
479 480 1.339727 ACTATTTTGGTCGGTGGAGCC 60.340 52.381 0.00 0.00 39.95 4.70
480 481 2.109425 ACTATTTTGGTCGGTGGAGC 57.891 50.000 0.00 0.00 41.07 4.70
481 482 4.467198 AGTACTATTTTGGTCGGTGGAG 57.533 45.455 0.00 0.00 0.00 3.86
482 483 4.529377 AGAAGTACTATTTTGGTCGGTGGA 59.471 41.667 0.00 0.00 0.00 4.02
483 484 4.828829 AGAAGTACTATTTTGGTCGGTGG 58.171 43.478 0.00 0.00 0.00 4.61
484 485 6.628185 ACTAGAAGTACTATTTTGGTCGGTG 58.372 40.000 0.00 0.00 0.00 4.94
485 486 6.847421 ACTAGAAGTACTATTTTGGTCGGT 57.153 37.500 0.00 0.00 0.00 4.69
486 487 7.545489 AGAACTAGAAGTACTATTTTGGTCGG 58.455 38.462 0.00 0.00 0.00 4.79
487 488 9.719279 CTAGAACTAGAAGTACTATTTTGGTCG 57.281 37.037 0.00 0.00 35.21 4.79
496 497 9.717942 ACGAAAGAACTAGAACTAGAAGTACTA 57.282 33.333 14.64 0.00 36.97 1.82
578 579 2.288666 GATCTTGCGAAATGTAGCCCA 58.711 47.619 0.00 0.00 0.00 5.36
595 596 6.109359 TCTTCTTAACTTGCAAGCTAGGATC 58.891 40.000 26.27 0.00 0.00 3.36
603 604 2.413371 GCGCCTCTTCTTAACTTGCAAG 60.413 50.000 24.84 24.84 0.00 4.01
607 608 0.721718 CCGCGCCTCTTCTTAACTTG 59.278 55.000 0.00 0.00 0.00 3.16
608 609 0.320697 ACCGCGCCTCTTCTTAACTT 59.679 50.000 0.00 0.00 0.00 2.66
635 636 3.545481 CTACAGAAGGCACGCGCG 61.545 66.667 30.96 30.96 39.92 6.86
640 641 4.799428 GTCGTTTCTATCTACAGAAGGCAC 59.201 45.833 0.00 0.00 35.99 5.01
715 732 6.449698 ACTCATGCCAAACTATGACAAAAAG 58.550 36.000 0.00 0.00 30.66 2.27
721 738 5.569059 CGAAAAACTCATGCCAAACTATGAC 59.431 40.000 0.00 0.00 30.66 3.06
722 739 5.471797 TCGAAAAACTCATGCCAAACTATGA 59.528 36.000 0.00 0.00 32.75 2.15
725 742 5.759506 TTCGAAAAACTCATGCCAAACTA 57.240 34.783 0.00 0.00 0.00 2.24
738 755 4.090210 TCGTTTGCCTTTGTTTCGAAAAAC 59.910 37.500 13.10 9.63 44.18 2.43
791 834 8.644795 ATCTGCTACTTTCAGATCGAGAGAGAG 61.645 44.444 13.23 9.68 45.31 3.20
792 835 6.911529 ATCTGCTACTTTCAGATCGAGAGAGA 60.912 42.308 13.23 6.36 45.31 3.10
793 836 5.239306 ATCTGCTACTTTCAGATCGAGAGAG 59.761 44.000 10.53 8.82 45.31 3.20
794 837 5.129634 ATCTGCTACTTTCAGATCGAGAGA 58.870 41.667 10.53 0.00 45.31 3.10
795 838 4.891627 TCTGCTACTTTCAGATCGAGAG 57.108 45.455 0.00 4.38 35.81 3.20
903 946 4.730949 TTACCCGATCTTAAGACACAGG 57.269 45.455 7.48 9.38 0.00 4.00
905 948 5.471556 TGTTTACCCGATCTTAAGACACA 57.528 39.130 7.48 0.00 0.00 3.72
925 968 3.524541 CCCCGCGTAGTAGTTTAATTGT 58.475 45.455 4.92 0.00 0.00 2.71
926 969 2.867975 CCCCCGCGTAGTAGTTTAATTG 59.132 50.000 4.92 0.00 0.00 2.32
929 972 1.750778 CTCCCCCGCGTAGTAGTTTAA 59.249 52.381 4.92 0.00 0.00 1.52
930 973 1.392589 CTCCCCCGCGTAGTAGTTTA 58.607 55.000 4.92 0.00 0.00 2.01
932 975 1.755783 CCTCCCCCGCGTAGTAGTT 60.756 63.158 4.92 0.00 0.00 2.24
1061 1120 2.641439 GATCTGGGCTGGAGACGCTG 62.641 65.000 0.00 0.00 0.00 5.18
1117 1176 2.106938 GTCAGATGGGATCGCGCA 59.893 61.111 8.75 0.00 41.50 6.09
1249 1308 2.209758 GGGAGAAGGGGAAAAGAGGAT 58.790 52.381 0.00 0.00 0.00 3.24
1250 1309 1.670059 GGGAGAAGGGGAAAAGAGGA 58.330 55.000 0.00 0.00 0.00 3.71
1346 1419 0.676782 CAGGAGAAACGCCCCGATTT 60.677 55.000 0.00 0.00 0.00 2.17
1349 1422 4.388499 GCAGGAGAAACGCCCCGA 62.388 66.667 0.00 0.00 0.00 5.14
1355 1428 2.859273 ATCCAGCGGCAGGAGAAACG 62.859 60.000 19.21 0.00 38.83 3.60
1356 1429 1.078143 ATCCAGCGGCAGGAGAAAC 60.078 57.895 19.21 0.00 38.83 2.78
1357 1430 1.221840 GATCCAGCGGCAGGAGAAA 59.778 57.895 19.21 0.00 38.83 2.52
1359 1432 2.042537 AGATCCAGCGGCAGGAGA 60.043 61.111 19.21 2.19 38.83 3.71
1360 1433 2.420890 GAGATCCAGCGGCAGGAG 59.579 66.667 19.21 0.00 38.83 3.69
1361 1434 3.157252 GGAGATCCAGCGGCAGGA 61.157 66.667 16.85 16.85 39.97 3.86
1362 1435 4.247380 GGGAGATCCAGCGGCAGG 62.247 72.222 4.84 4.84 37.91 4.85
1435 1510 1.339055 CCCAGACAATCATCACACGGT 60.339 52.381 0.00 0.00 0.00 4.83
1493 1568 4.659874 CCACGACGCAAACACCGC 62.660 66.667 0.00 0.00 0.00 5.68
1494 1569 4.007940 CCCACGACGCAAACACCG 62.008 66.667 0.00 0.00 0.00 4.94
1500 1575 4.673298 ACGCATCCCACGACGCAA 62.673 61.111 0.00 0.00 0.00 4.85
1504 1579 4.796231 AGCGACGCATCCCACGAC 62.796 66.667 23.70 0.00 0.00 4.34
1510 1585 3.950794 TTGACCCAGCGACGCATCC 62.951 63.158 23.70 6.69 0.00 3.51
1516 1591 1.745489 GACCCATTGACCCAGCGAC 60.745 63.158 0.00 0.00 0.00 5.19
1518 1593 2.819595 CGACCCATTGACCCAGCG 60.820 66.667 0.00 0.00 0.00 5.18
1521 1604 3.253061 TGGCGACCCATTGACCCA 61.253 61.111 0.00 0.00 35.79 4.51
1533 1616 1.131638 AGCTAAGGATCCAATGGCGA 58.868 50.000 15.82 0.00 0.00 5.54
1584 1667 0.956410 ATCTCGCGATCTAGACCGGG 60.956 60.000 17.15 17.15 39.59 5.73
1658 1750 2.095008 CCCAGATCACACTATCGATCGG 60.095 54.545 16.41 1.30 42.36 4.18
1708 1800 4.665212 ACAATGCATCACGATTCATGAAC 58.335 39.130 11.07 4.22 0.00 3.18
1795 1887 4.530857 AGCTCGTACATGGCGGCC 62.531 66.667 13.32 13.32 0.00 6.13
1888 1980 2.125952 GCAAAATCACGCCCTGCC 60.126 61.111 0.00 0.00 0.00 4.85
1897 1989 3.181468 TGTGCAAATGTGAGGCAAAATCA 60.181 39.130 0.00 0.00 39.57 2.57
1941 2033 9.950496 AACATGTGAGAATCTTCTTAGTTACAT 57.050 29.630 0.00 0.00 37.73 2.29
1955 2049 6.204301 CAGAGACAGACAAAACATGTGAGAAT 59.796 38.462 0.00 0.00 44.12 2.40
1969 2063 2.662006 GCATACAGCAGAGACAGACA 57.338 50.000 0.00 0.00 44.79 3.41
1995 2089 1.064003 TTAGCCCAGCTGTTTCCTCA 58.936 50.000 13.81 0.00 40.10 3.86
2053 2147 2.552315 TGCCCTTCAAAATCAGTTCGAC 59.448 45.455 0.00 0.00 0.00 4.20
2054 2148 2.552315 GTGCCCTTCAAAATCAGTTCGA 59.448 45.455 0.00 0.00 0.00 3.71
2069 2163 1.421646 AGTTAGCTTGTGAAGTGCCCT 59.578 47.619 0.00 0.00 0.00 5.19
2080 2174 6.970613 ACGGAGTAAAAACAAAAGTTAGCTTG 59.029 34.615 0.00 0.00 41.94 4.01
2095 2189 6.202570 ACATAGCGTGTTAAAACGGAGTAAAA 59.797 34.615 19.39 0.00 37.59 1.52
2103 2197 3.181524 CCCAGACATAGCGTGTTAAAACG 60.182 47.826 13.99 13.99 42.36 3.60
2116 2210 2.509548 AGGCTGCATAAACCCAGACATA 59.490 45.455 0.50 0.00 39.60 2.29
2120 2214 1.289160 AGAGGCTGCATAAACCCAGA 58.711 50.000 0.50 0.00 0.00 3.86
2179 2273 7.161404 TCATTTATCTTACCTGGATTCCATCG 58.839 38.462 5.70 2.14 30.82 3.84
2224 2318 0.247736 ACAGAAGCTCCTGGTAAGCG 59.752 55.000 4.49 0.00 44.59 4.68
2232 2326 2.264455 ACCATCAGAACAGAAGCTCCT 58.736 47.619 0.00 0.00 0.00 3.69
2233 2327 2.777832 ACCATCAGAACAGAAGCTCC 57.222 50.000 0.00 0.00 0.00 4.70
2241 2335 3.998913 TGAAGCCATACCATCAGAACA 57.001 42.857 0.00 0.00 0.00 3.18
2256 2350 5.213675 GCTGCAATGAGAAGATTATGAAGC 58.786 41.667 0.00 0.00 0.00 3.86
2259 2353 3.249320 GCGCTGCAATGAGAAGATTATGA 59.751 43.478 0.00 0.00 0.00 2.15
2260 2354 3.552541 GCGCTGCAATGAGAAGATTATG 58.447 45.455 0.00 0.00 0.00 1.90
2267 2361 1.746615 GAGGGCGCTGCAATGAGAA 60.747 57.895 8.56 0.00 0.00 2.87
2483 2578 3.130340 TCTCCAACACCTGAAACAAAAGC 59.870 43.478 0.00 0.00 0.00 3.51
2568 2663 6.463049 GGCAGGAATGCTAGATAGAAGTTGTA 60.463 42.308 0.00 0.00 34.73 2.41
2569 2664 5.363939 GCAGGAATGCTAGATAGAAGTTGT 58.636 41.667 0.00 0.00 0.00 3.32
2570 2665 4.754114 GGCAGGAATGCTAGATAGAAGTTG 59.246 45.833 0.00 0.00 34.73 3.16
2572 2667 4.230455 AGGCAGGAATGCTAGATAGAAGT 58.770 43.478 0.00 0.00 34.73 3.01
2573 2668 4.527816 AGAGGCAGGAATGCTAGATAGAAG 59.472 45.833 0.00 0.00 34.73 2.85
2575 2670 4.125124 AGAGGCAGGAATGCTAGATAGA 57.875 45.455 0.00 0.00 34.73 1.98
2598 2693 2.355197 TGCATCCACGGATTGTACAAG 58.645 47.619 14.65 3.13 31.62 3.16
2660 2763 7.040548 TGCTTCATCAATGTGTTCTCAAATACA 60.041 33.333 0.00 0.00 40.25 2.29
2830 2933 2.553602 CAGCACTGTGTCCTGCATAAAA 59.446 45.455 9.86 0.00 35.73 1.52
2834 2937 1.303074 CCAGCACTGTGTCCTGCAT 60.303 57.895 9.86 0.00 35.73 3.96
2860 2963 5.813513 ACTCCTTTTTGATGCCTTGAAAT 57.186 34.783 0.00 0.00 0.00 2.17
2866 2969 3.837355 AGTGAACTCCTTTTTGATGCCT 58.163 40.909 0.00 0.00 0.00 4.75
2920 3023 8.246180 AGATGTAAAATCATGACACATCCAAAC 58.754 33.333 24.09 10.72 44.15 2.93
2928 3031 9.820229 TCGTTAAAAGATGTAAAATCATGACAC 57.180 29.630 0.00 0.00 0.00 3.67
2947 3050 8.712363 CAGAGAAGAAATGTGAGAATCGTTAAA 58.288 33.333 0.00 0.00 38.61 1.52
2956 3059 4.039609 TGTCTGCAGAGAAGAAATGTGAGA 59.960 41.667 18.89 0.00 0.00 3.27
2957 3060 4.313282 TGTCTGCAGAGAAGAAATGTGAG 58.687 43.478 18.89 0.00 0.00 3.51
2961 3064 3.181499 GCCATGTCTGCAGAGAAGAAATG 60.181 47.826 18.89 10.51 38.59 2.32
2968 3071 1.196766 ACAGGCCATGTCTGCAGAGA 61.197 55.000 18.89 17.80 39.08 3.10
3030 3133 3.544698 ACCTGTCCTGTTAGAAGAGGA 57.455 47.619 4.09 4.09 45.27 3.71
3070 3173 8.738645 ATAACTTTTATCAGGAGGACATTGTC 57.261 34.615 8.34 8.34 0.00 3.18
3268 3405 0.603569 GCCACGAGACCTTTGAGAGA 59.396 55.000 0.00 0.00 0.00 3.10
3369 3508 9.787435 AATACTGTACAAGGTAATTTGAGTCAA 57.213 29.630 0.08 0.08 0.00 3.18
3529 3668 1.136828 TGGAGGTGTTAGCCACAAGT 58.863 50.000 0.00 0.00 46.44 3.16
3739 3881 2.230508 AGCTTGCAATGATTCCACACTG 59.769 45.455 0.00 0.00 0.00 3.66
3742 3884 2.629137 ACAAGCTTGCAATGATTCCACA 59.371 40.909 26.27 0.00 0.00 4.17
3750 3892 2.137523 GGAAACCACAAGCTTGCAATG 58.862 47.619 26.27 16.48 0.00 2.82
3785 3927 8.112016 AGCAGTATCTACAATCGTACATACAT 57.888 34.615 0.00 0.00 33.96 2.29
3809 3951 7.610305 TGAAGCCCCAGAAATACTAAAACTAAG 59.390 37.037 0.00 0.00 0.00 2.18
3810 3952 7.463431 TGAAGCCCCAGAAATACTAAAACTAA 58.537 34.615 0.00 0.00 0.00 2.24
3857 3999 9.787532 GATGCTGCTTTTACACTTTTTATATGA 57.212 29.630 0.00 0.00 0.00 2.15
4059 4202 1.068588 TGGATCACTTAGGCCGATTCG 59.931 52.381 0.00 0.00 0.00 3.34
4179 4323 5.827797 TCAGCAATGGTAATTCCTGGAATAC 59.172 40.000 21.62 17.63 33.09 1.89
4355 4499 7.221645 GCATATATACAGCAGTATACAGCAGTG 59.778 40.741 22.85 15.37 43.84 3.66
4358 4502 7.340487 AGAGCATATATACAGCAGTATACAGCA 59.660 37.037 20.74 2.42 43.84 4.41
4359 4503 7.647318 CAGAGCATATATACAGCAGTATACAGC 59.353 40.741 12.03 12.03 43.84 4.40
4360 4504 8.134261 CCAGAGCATATATACAGCAGTATACAG 58.866 40.741 10.79 0.00 43.84 2.74
4361 4505 7.615757 ACCAGAGCATATATACAGCAGTATACA 59.384 37.037 10.79 0.44 43.84 2.29
4362 4506 7.918033 CACCAGAGCATATATACAGCAGTATAC 59.082 40.741 10.79 0.00 43.84 1.47
4363 4507 7.416777 GCACCAGAGCATATATACAGCAGTATA 60.417 40.741 10.95 10.95 44.81 1.47
4364 4508 6.629068 GCACCAGAGCATATATACAGCAGTAT 60.629 42.308 6.99 6.99 43.23 2.12
4365 4509 5.336770 GCACCAGAGCATATATACAGCAGTA 60.337 44.000 10.60 0.00 34.10 2.74
4455 4599 6.391227 TGGATCAAGACAAAGGAGAAAAAC 57.609 37.500 0.00 0.00 0.00 2.43
4570 4714 9.076596 GTTCTACCATTTGCAATAATGTTCTTC 57.923 33.333 0.00 0.00 34.42 2.87
4835 5000 1.566018 GAACCTTCCCAGCACGTTCG 61.566 60.000 0.00 0.00 0.00 3.95
4853 5018 1.699083 TCTGGACTGCCAAGACATTGA 59.301 47.619 0.00 0.00 45.41 2.57
5004 5169 5.381757 AGTAACAAAGCAATGGAAGGTACA 58.618 37.500 0.00 0.00 0.00 2.90
5186 5359 5.620205 CGTCAGTACAACAGAGAGCACTAAT 60.620 44.000 0.00 0.00 0.00 1.73
5213 5386 0.173481 GCCTACAGTGCAGACGATGA 59.827 55.000 0.00 0.00 0.00 2.92
5355 5528 5.182570 TGAATCCTCAGCAACAAAATGAGAG 59.817 40.000 3.09 0.00 42.48 3.20
5490 5663 7.592885 ATTCATTGCCTACTAAAAGCATGAT 57.407 32.000 0.00 0.00 36.20 2.45
5571 5744 3.826729 ACAAAAGCACCAACCTATTCTCC 59.173 43.478 0.00 0.00 0.00 3.71
5580 5753 1.396648 GCAAACCACAAAAGCACCAAC 59.603 47.619 0.00 0.00 0.00 3.77
5989 6165 7.596749 AGATACATACTTCCAAGTTCAAACG 57.403 36.000 0.00 0.00 40.37 3.60
6021 6197 6.911162 TTCCCAATGGAACAAAAGAAACATGG 60.911 38.462 0.00 0.00 45.88 3.66
6047 6223 4.468153 TCAAACTTTAACCAAAGGGCAACT 59.532 37.500 2.51 0.00 44.63 3.16
6110 6286 9.886132 TCCATAAGAGTTAAGGACAGAATAAAC 57.114 33.333 0.00 0.00 28.71 2.01
6175 6352 5.137551 ACTAGCAGTTTCCTTTTTAGGCAA 58.862 37.500 0.00 0.00 0.00 4.52
6211 6388 2.803133 GCCATCTGCTGCTACACGATTA 60.803 50.000 0.00 0.00 36.87 1.75
6279 6457 8.039603 TGACTGAATGCTTTGTCGTTAATTAT 57.960 30.769 0.00 0.00 32.64 1.28
6283 6461 5.940192 ATGACTGAATGCTTTGTCGTTAA 57.060 34.783 0.00 0.00 32.64 2.01
6362 6540 1.672881 GTTAGCATGATGAGGGCACAC 59.327 52.381 0.00 0.00 0.00 3.82
6427 6614 6.940298 AGCATAAACAGTTCACTTAAGCCTAA 59.060 34.615 1.29 0.00 0.00 2.69
6429 6616 5.316987 AGCATAAACAGTTCACTTAAGCCT 58.683 37.500 1.29 0.00 0.00 4.58
6443 6630 3.380471 ACCATGGCCTTAGCATAAACA 57.620 42.857 13.04 0.00 42.56 2.83
6496 6685 0.521291 TAAACCTCATGCTTGTGCGC 59.479 50.000 0.00 0.00 43.34 6.09
6542 6732 4.885426 GCTAGGCTAGCCAATGCA 57.115 55.556 34.70 13.33 45.95 3.96
6600 6790 6.749118 CCTTATTTCTCTTTTGTGCACTATGC 59.251 38.462 19.41 0.00 45.29 3.14
6739 7103 8.653191 TCCACCACTTCTACTAATACAAGAAAA 58.347 33.333 0.00 0.00 0.00 2.29
6824 7189 8.627403 GCCTGCAAATCAAGCATACATATATAT 58.373 33.333 0.00 0.00 41.82 0.86
6825 7190 7.830697 AGCCTGCAAATCAAGCATACATATATA 59.169 33.333 0.00 0.00 41.82 0.86
6841 7206 2.338015 CGCTCCACAGCCTGCAAAT 61.338 57.895 0.00 0.00 43.56 2.32
6890 7255 2.530700 GCGACTCTTTATGACAGCGTAC 59.469 50.000 0.00 0.00 0.00 3.67
7050 7418 9.774742 GTTGAGGACAAACAAAGTATCAATATC 57.225 33.333 0.00 0.00 37.77 1.63
7068 7436 3.756117 ACTTTTGGGATCTGTTGAGGAC 58.244 45.455 0.00 0.00 0.00 3.85
7070 7438 3.189287 CGAACTTTTGGGATCTGTTGAGG 59.811 47.826 0.00 0.00 0.00 3.86
7117 7487 2.833794 TCTGGAATTTCGCGATTAGGG 58.166 47.619 10.88 0.00 0.00 3.53
7279 7650 2.494073 ACAAACTCCGGTGAAGCAAAAA 59.506 40.909 11.17 0.00 0.00 1.94
7374 7745 5.012561 CCAAACAATGTAAAAATCCTGGGGA 59.987 40.000 0.00 0.00 35.55 4.81
7466 7837 1.742880 CATGTCCACCGGTGCTCAG 60.743 63.158 29.75 15.56 0.00 3.35
7491 7862 2.158957 TGGACATCGTGCTTATTCCTCC 60.159 50.000 0.00 0.00 0.00 4.30
7552 7923 9.494271 GAGAATGATGGCAAATACAGTAATAGA 57.506 33.333 0.00 0.00 0.00 1.98
7553 7924 8.725148 GGAGAATGATGGCAAATACAGTAATAG 58.275 37.037 0.00 0.00 0.00 1.73
7572 7943 1.332997 GCAAATCAGAGCGGGAGAATG 59.667 52.381 0.00 0.00 0.00 2.67
7587 7958 4.732784 CACAAAATAGTACTGCCGCAAAT 58.267 39.130 5.39 0.00 0.00 2.32
7588 7959 3.610585 GCACAAAATAGTACTGCCGCAAA 60.611 43.478 5.39 0.00 0.00 3.68
7599 7970 6.503524 ACAAATCGACAAAGCACAAAATAGT 58.496 32.000 0.00 0.00 0.00 2.12
7607 7978 7.962918 AGATAATGTTACAAATCGACAAAGCAC 59.037 33.333 0.00 0.00 0.00 4.40
7637 8010 6.882140 ACCACATCGTCAAACATAATCCTTTA 59.118 34.615 0.00 0.00 0.00 1.85
7674 8047 0.032813 CTCTACCCCCTCCGGTTGTA 60.033 60.000 0.00 0.00 37.34 2.41
7677 8050 2.115952 AACCTCTACCCCCTCCGGTT 62.116 60.000 0.00 0.00 37.34 4.44
7680 8053 2.064581 CCAACCTCTACCCCCTCCG 61.065 68.421 0.00 0.00 0.00 4.63
7681 8054 0.253020 TTCCAACCTCTACCCCCTCC 60.253 60.000 0.00 0.00 0.00 4.30
7682 8055 1.560146 CTTTCCAACCTCTACCCCCTC 59.440 57.143 0.00 0.00 0.00 4.30
7685 8088 1.369403 ACCTTTCCAACCTCTACCCC 58.631 55.000 0.00 0.00 0.00 4.95
7687 8090 3.447950 TCCTACCTTTCCAACCTCTACC 58.552 50.000 0.00 0.00 0.00 3.18
7693 8096 5.128171 ACTTTTTGTTCCTACCTTTCCAACC 59.872 40.000 0.00 0.00 0.00 3.77
7781 8423 3.248602 CCAGACGGTTGAAAAGACAAGAG 59.751 47.826 0.00 0.00 0.00 2.85
7783 8425 2.290641 CCCAGACGGTTGAAAAGACAAG 59.709 50.000 0.00 0.00 0.00 3.16
7784 8426 2.294074 CCCAGACGGTTGAAAAGACAA 58.706 47.619 0.00 0.00 0.00 3.18
7814 8458 2.635443 CCACCCCATGCGTCCAAAC 61.635 63.158 0.00 0.00 0.00 2.93
7833 8477 1.301677 CCGCTTTCTCCCAGCAAGAC 61.302 60.000 0.00 0.00 37.07 3.01
7839 8483 1.153745 CGTCTCCGCTTTCTCCCAG 60.154 63.158 0.00 0.00 0.00 4.45
7851 8495 2.908796 GTTCCCCCATCCGTCTCC 59.091 66.667 0.00 0.00 0.00 3.71
7856 8504 1.525995 CAATCCGTTCCCCCATCCG 60.526 63.158 0.00 0.00 0.00 4.18
7863 8511 2.124278 GCCTCCCAATCCGTTCCC 60.124 66.667 0.00 0.00 0.00 3.97
7864 8512 2.513897 CGCCTCCCAATCCGTTCC 60.514 66.667 0.00 0.00 0.00 3.62
7865 8513 3.202706 GCGCCTCCCAATCCGTTC 61.203 66.667 0.00 0.00 0.00 3.95
7866 8514 3.976701 CTGCGCCTCCCAATCCGTT 62.977 63.158 4.18 0.00 0.00 4.44
7867 8515 4.473520 CTGCGCCTCCCAATCCGT 62.474 66.667 4.18 0.00 0.00 4.69
7869 8517 4.802051 TGCTGCGCCTCCCAATCC 62.802 66.667 4.18 0.00 0.00 3.01
7871 8519 4.809496 CCTGCTGCGCCTCCCAAT 62.809 66.667 4.18 0.00 0.00 3.16
7878 8526 4.496336 ATCCTTCCCTGCTGCGCC 62.496 66.667 4.18 0.00 0.00 6.53
7879 8527 2.899339 GATCCTTCCCTGCTGCGC 60.899 66.667 0.00 0.00 0.00 6.09
7882 8530 1.153289 CGTGGATCCTTCCCTGCTG 60.153 63.158 14.23 0.00 41.83 4.41
7883 8531 1.613630 ACGTGGATCCTTCCCTGCT 60.614 57.895 14.23 0.00 41.83 4.24
7885 8533 1.264749 TGGACGTGGATCCTTCCCTG 61.265 60.000 14.23 0.00 41.83 4.45
7886 8534 1.080354 TGGACGTGGATCCTTCCCT 59.920 57.895 14.23 0.00 41.83 4.20
7887 8535 1.221021 GTGGACGTGGATCCTTCCC 59.779 63.158 14.23 9.41 41.83 3.97
7890 8538 1.537889 TGGGTGGACGTGGATCCTT 60.538 57.895 14.23 0.00 39.75 3.36
7891 8539 2.121832 TGGGTGGACGTGGATCCT 59.878 61.111 14.23 0.00 39.75 3.24
7893 8541 2.267961 GGTGGGTGGACGTGGATC 59.732 66.667 0.00 0.00 0.00 3.36
7894 8542 3.702048 CGGTGGGTGGACGTGGAT 61.702 66.667 0.00 0.00 0.00 3.41
7895 8543 4.918278 TCGGTGGGTGGACGTGGA 62.918 66.667 0.00 0.00 0.00 4.02
7896 8544 4.675029 GTCGGTGGGTGGACGTGG 62.675 72.222 0.00 0.00 0.00 4.94
7897 8545 4.675029 GGTCGGTGGGTGGACGTG 62.675 72.222 0.00 0.00 33.99 4.49
7948 8596 3.376918 GTCCAAGCAAGCAGGGGC 61.377 66.667 0.00 0.00 41.61 5.80
8051 8704 2.511373 TCACGCACGGCATCCATC 60.511 61.111 0.00 0.00 0.00 3.51
8111 8764 1.753649 GTAGAGTAGACCCCGGAAACC 59.246 57.143 0.73 0.00 0.00 3.27


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.