Multiple sequence alignment - TraesCS7B01G391000

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G391000 chr7B 100.000 3322 0 0 1 3322 657527060 657530381 0.000000e+00 6135
1 TraesCS7B01G391000 chr7B 97.426 777 18 2 1 777 57444265 57443491 0.000000e+00 1323
2 TraesCS7B01G391000 chr2B 96.139 777 29 1 1 777 554739480 554740255 0.000000e+00 1267
3 TraesCS7B01G391000 chr6B 95.887 778 31 1 1 777 267966473 267965696 0.000000e+00 1258
4 TraesCS7B01G391000 chr6B 91.791 134 11 0 3075 3208 256452839 256452706 1.570000e-43 187
5 TraesCS7B01G391000 chr5A 93.308 777 49 1 1 777 573633129 573632356 0.000000e+00 1144
6 TraesCS7B01G391000 chr5A 87.130 777 94 1 1 777 475878214 475878984 0.000000e+00 876
7 TraesCS7B01G391000 chr2A 92.407 777 56 1 1 777 195335840 195335067 0.000000e+00 1105
8 TraesCS7B01G391000 chr2A 95.302 149 7 0 1415 1563 696927351 696927499 1.540000e-58 237
9 TraesCS7B01G391000 chr2A 97.810 137 3 0 1427 1563 717254412 717254548 1.540000e-58 237
10 TraesCS7B01G391000 chr7A 92.470 757 53 2 1563 2319 677885078 677885830 0.000000e+00 1079
11 TraesCS7B01G391000 chr7A 86.883 648 59 10 792 1414 677884441 677885087 0.000000e+00 702
12 TraesCS7B01G391000 chr7A 83.176 743 86 16 2334 3068 677885928 677886639 0.000000e+00 643
13 TraesCS7B01G391000 chr7A 96.364 165 4 2 1407 1570 664429160 664429323 1.520000e-68 270
14 TraesCS7B01G391000 chr7A 91.391 151 13 0 3062 3212 545602538 545602688 1.210000e-49 207
15 TraesCS7B01G391000 chr7A 89.423 104 9 2 3214 3317 677886639 677886740 2.690000e-26 130
16 TraesCS7B01G391000 chr3D 91.108 776 69 0 2 777 430352672 430351897 0.000000e+00 1051
17 TraesCS7B01G391000 chr3D 91.034 145 13 0 3066 3210 48800357 48800501 2.610000e-46 196
18 TraesCS7B01G391000 chr3D 88.158 152 18 0 3065 3216 61800311 61800160 7.320000e-42 182
19 TraesCS7B01G391000 chr4A 89.833 777 77 1 1 777 602311620 602310846 0.000000e+00 996
20 TraesCS7B01G391000 chr4A 96.078 153 6 0 1413 1565 541884849 541885001 1.980000e-62 250
21 TraesCS7B01G391000 chr2D 88.031 777 72 10 1 777 178291974 178292729 0.000000e+00 900
22 TraesCS7B01G391000 chr2D 87.919 149 18 0 3064 3212 204140350 204140202 3.410000e-40 176
23 TraesCS7B01G391000 chr7D 86.430 759 89 11 1563 2319 586775722 586776468 0.000000e+00 819
24 TraesCS7B01G391000 chr7D 92.901 493 33 1 922 1414 586775241 586775731 0.000000e+00 715
25 TraesCS7B01G391000 chr7D 84.097 742 80 15 2334 3068 586776525 586777235 0.000000e+00 682
26 TraesCS7B01G391000 chr7D 90.780 141 13 0 3068 3208 53449151 53449291 4.380000e-44 189
27 TraesCS7B01G391000 chr7D 90.385 104 6 4 3214 3317 586777235 586777334 2.080000e-27 134
28 TraesCS7B01G391000 chr1B 98.675 151 2 0 1415 1565 563557998 563557848 5.460000e-68 268
29 TraesCS7B01G391000 chr1B 93.960 149 9 0 1416 1564 299981549 299981401 3.330000e-55 226
30 TraesCS7B01G391000 chr1B 86.301 146 20 0 3065 3210 27238049 27237904 3.430000e-35 159
31 TraesCS7B01G391000 chr6A 98.667 150 2 0 1415 1564 330376525 330376674 1.960000e-67 267
32 TraesCS7B01G391000 chr1A 99.315 146 1 0 1418 1563 335836543 335836398 7.070000e-67 265
33 TraesCS7B01G391000 chr1A 96.124 129 4 1 1437 1564 430185793 430185665 3.360000e-50 209
34 TraesCS7B01G391000 chr3B 72.093 688 166 22 25 699 141072495 141071821 2.040000e-42 183
35 TraesCS7B01G391000 chr3B 73.640 478 100 22 19 484 201880596 201881059 9.540000e-36 161
36 TraesCS7B01G391000 chrUn 88.966 145 16 0 3066 3210 11029434 11029578 2.630000e-41 180
37 TraesCS7B01G391000 chr6D 86.395 147 20 0 3066 3212 467806076 467805930 9.540000e-36 161


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G391000 chr7B 657527060 657530381 3321 False 6135.0 6135 100.00000 1 3322 1 chr7B.!!$F1 3321
1 TraesCS7B01G391000 chr7B 57443491 57444265 774 True 1323.0 1323 97.42600 1 777 1 chr7B.!!$R1 776
2 TraesCS7B01G391000 chr2B 554739480 554740255 775 False 1267.0 1267 96.13900 1 777 1 chr2B.!!$F1 776
3 TraesCS7B01G391000 chr6B 267965696 267966473 777 True 1258.0 1258 95.88700 1 777 1 chr6B.!!$R2 776
4 TraesCS7B01G391000 chr5A 573632356 573633129 773 True 1144.0 1144 93.30800 1 777 1 chr5A.!!$R1 776
5 TraesCS7B01G391000 chr5A 475878214 475878984 770 False 876.0 876 87.13000 1 777 1 chr5A.!!$F1 776
6 TraesCS7B01G391000 chr2A 195335067 195335840 773 True 1105.0 1105 92.40700 1 777 1 chr2A.!!$R1 776
7 TraesCS7B01G391000 chr7A 677884441 677886740 2299 False 638.5 1079 87.98800 792 3317 4 chr7A.!!$F3 2525
8 TraesCS7B01G391000 chr3D 430351897 430352672 775 True 1051.0 1051 91.10800 2 777 1 chr3D.!!$R2 775
9 TraesCS7B01G391000 chr4A 602310846 602311620 774 True 996.0 996 89.83300 1 777 1 chr4A.!!$R1 776
10 TraesCS7B01G391000 chr2D 178291974 178292729 755 False 900.0 900 88.03100 1 777 1 chr2D.!!$F1 776
11 TraesCS7B01G391000 chr7D 586775241 586777334 2093 False 587.5 819 88.45325 922 3317 4 chr7D.!!$F2 2395

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
965 997 0.386838 ATCGTGATGAGCGAGCATGA 59.613 50.0 0.0 2.06 40.25 3.07 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2345 2462 0.033504 ATAGGTATCCCGCAGCAACG 59.966 55.0 0.0 0.0 35.12 4.1 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
221 228 3.345714 CTTTAACATGATCGCTCGCAAC 58.654 45.455 0.00 0.00 0.00 4.17
330 339 1.676746 ATGCAAGCACTCATAGGCAG 58.323 50.000 0.00 0.00 34.43 4.85
501 510 5.011125 TGTGAGAGAAGAGTCGGATCTTTTT 59.989 40.000 4.81 0.00 39.63 1.94
642 652 2.036572 GGGCCGGAAAACCATCCA 59.963 61.111 5.05 0.00 39.61 3.41
694 704 3.279434 ACAACGCCTTCTTCACTTCTTT 58.721 40.909 0.00 0.00 0.00 2.52
777 787 7.495606 CAGTGTCCAGTACTTCATGCATATTAA 59.504 37.037 0.00 0.00 0.00 1.40
778 788 8.213679 AGTGTCCAGTACTTCATGCATATTAAT 58.786 33.333 0.00 0.00 0.00 1.40
779 789 8.840321 GTGTCCAGTACTTCATGCATATTAATT 58.160 33.333 0.00 0.00 0.00 1.40
780 790 9.407380 TGTCCAGTACTTCATGCATATTAATTT 57.593 29.630 0.00 0.00 0.00 1.82
783 793 8.971321 CCAGTACTTCATGCATATTAATTTTGC 58.029 33.333 0.00 13.39 36.91 3.68
784 794 9.740239 CAGTACTTCATGCATATTAATTTTGCT 57.260 29.630 18.39 6.81 37.28 3.91
785 795 9.740239 AGTACTTCATGCATATTAATTTTGCTG 57.260 29.630 18.39 14.73 37.28 4.41
786 796 8.971321 GTACTTCATGCATATTAATTTTGCTGG 58.029 33.333 18.39 12.67 37.28 4.85
787 797 7.784037 ACTTCATGCATATTAATTTTGCTGGA 58.216 30.769 18.39 14.10 37.28 3.86
788 798 7.707893 ACTTCATGCATATTAATTTTGCTGGAC 59.292 33.333 18.39 0.00 37.28 4.02
789 799 6.514947 TCATGCATATTAATTTTGCTGGACC 58.485 36.000 18.39 0.00 37.28 4.46
790 800 5.929058 TGCATATTAATTTTGCTGGACCA 57.071 34.783 18.39 0.00 37.28 4.02
794 804 7.495279 TGCATATTAATTTTGCTGGACCAAATC 59.505 33.333 18.39 0.00 37.28 2.17
822 832 1.076044 AAGCAGCCCAACCAGTTGT 60.076 52.632 9.53 0.00 38.85 3.32
826 836 0.400213 CAGCCCAACCAGTTGTCCTA 59.600 55.000 9.53 0.00 38.85 2.94
829 839 1.004277 GCCCAACCAGTTGTCCTATCA 59.996 52.381 9.53 0.00 38.85 2.15
830 840 2.357154 GCCCAACCAGTTGTCCTATCAT 60.357 50.000 9.53 0.00 38.85 2.45
835 845 5.256474 CAACCAGTTGTCCTATCATTCCTT 58.744 41.667 2.27 0.00 35.92 3.36
836 846 5.520748 ACCAGTTGTCCTATCATTCCTTT 57.479 39.130 0.00 0.00 0.00 3.11
837 847 5.892348 ACCAGTTGTCCTATCATTCCTTTT 58.108 37.500 0.00 0.00 0.00 2.27
875 885 5.994250 TCCTTTCCCTGTTGATATCTTCTG 58.006 41.667 3.98 1.76 0.00 3.02
882 895 2.499693 TGTTGATATCTTCTGCCCGTGA 59.500 45.455 3.98 0.00 0.00 4.35
885 898 2.029918 TGATATCTTCTGCCCGTGATCG 60.030 50.000 3.98 0.00 0.00 3.69
898 911 1.670295 CGTGATCGATTGCAATTCCCA 59.330 47.619 14.33 6.98 39.71 4.37
903 916 3.280197 TCGATTGCAATTCCCAGATCA 57.720 42.857 14.33 0.00 0.00 2.92
908 921 3.219176 TGCAATTCCCAGATCAGATCC 57.781 47.619 6.80 0.00 0.00 3.36
909 922 2.510800 TGCAATTCCCAGATCAGATCCA 59.489 45.455 6.80 0.00 0.00 3.41
910 923 3.053470 TGCAATTCCCAGATCAGATCCAA 60.053 43.478 6.80 0.00 0.00 3.53
912 925 4.202090 GCAATTCCCAGATCAGATCCAAAC 60.202 45.833 6.80 0.00 0.00 2.93
913 926 3.652057 TTCCCAGATCAGATCCAAACC 57.348 47.619 6.80 0.00 0.00 3.27
914 927 1.846439 TCCCAGATCAGATCCAAACCC 59.154 52.381 6.80 0.00 0.00 4.11
915 928 1.849039 CCCAGATCAGATCCAAACCCT 59.151 52.381 6.80 0.00 0.00 4.34
916 929 2.422519 CCCAGATCAGATCCAAACCCTG 60.423 54.545 6.80 0.00 0.00 4.45
917 930 2.507058 CCAGATCAGATCCAAACCCTGA 59.493 50.000 6.80 0.00 40.68 3.86
918 931 3.433314 CCAGATCAGATCCAAACCCTGAG 60.433 52.174 6.80 0.00 39.89 3.35
940 970 4.435436 CCGCCAGCGTGCTCTGTA 62.435 66.667 11.55 0.00 37.81 2.74
965 997 0.386838 ATCGTGATGAGCGAGCATGA 59.613 50.000 0.00 2.06 40.25 3.07
969 1001 0.526310 TGATGAGCGAGCATGACGAC 60.526 55.000 14.93 9.12 0.00 4.34
1270 1305 0.613292 TCCTTCAGAGCGCTTCTCCT 60.613 55.000 13.26 0.00 42.90 3.69
1344 1379 0.036732 TCATGAACCACACTGAGGGC 59.963 55.000 0.00 0.00 0.00 5.19
1399 1434 0.530870 GCACCGGATAGCAGTTCCTC 60.531 60.000 9.46 0.00 0.00 3.71
1404 1439 0.676736 GGATAGCAGTTCCTCGGGAG 59.323 60.000 0.00 0.00 31.21 4.30
1405 1440 1.404843 GATAGCAGTTCCTCGGGAGT 58.595 55.000 0.00 0.00 31.21 3.85
1406 1441 1.757699 GATAGCAGTTCCTCGGGAGTT 59.242 52.381 0.00 0.00 31.21 3.01
1407 1442 1.183549 TAGCAGTTCCTCGGGAGTTC 58.816 55.000 0.00 0.00 31.21 3.01
1408 1443 1.079057 GCAGTTCCTCGGGAGTTCC 60.079 63.158 0.00 0.00 31.21 3.62
1417 1452 2.435059 GGGAGTTCCGTCAGCAGC 60.435 66.667 0.00 0.00 36.71 5.25
1418 1453 2.343758 GGAGTTCCGTCAGCAGCA 59.656 61.111 0.00 0.00 0.00 4.41
1419 1454 2.029844 GGAGTTCCGTCAGCAGCAC 61.030 63.158 0.00 0.00 0.00 4.40
1420 1455 1.005630 GAGTTCCGTCAGCAGCACT 60.006 57.895 0.00 0.00 0.00 4.40
1431 1466 2.510238 CAGCACTGCTAGGCGGAC 60.510 66.667 2.39 0.00 36.40 4.79
1432 1467 4.135153 AGCACTGCTAGGCGGACG 62.135 66.667 0.21 0.00 36.99 4.79
1433 1468 4.129737 GCACTGCTAGGCGGACGA 62.130 66.667 5.30 0.00 38.46 4.20
1434 1469 2.202623 CACTGCTAGGCGGACGAC 60.203 66.667 5.30 0.00 38.46 4.34
1435 1470 2.361357 ACTGCTAGGCGGACGACT 60.361 61.111 5.07 5.07 38.46 4.18
1436 1471 1.077930 ACTGCTAGGCGGACGACTA 60.078 57.895 7.13 7.13 38.46 2.59
1437 1472 0.679002 ACTGCTAGGCGGACGACTAA 60.679 55.000 8.79 0.00 38.46 2.24
1438 1473 0.669077 CTGCTAGGCGGACGACTAAT 59.331 55.000 8.79 0.00 34.97 1.73
1439 1474 1.067212 CTGCTAGGCGGACGACTAATT 59.933 52.381 8.79 0.00 34.97 1.40
1440 1475 1.479323 TGCTAGGCGGACGACTAATTT 59.521 47.619 8.79 0.00 34.97 1.82
1441 1476 2.689471 TGCTAGGCGGACGACTAATTTA 59.311 45.455 8.79 0.00 34.97 1.40
1442 1477 3.130869 TGCTAGGCGGACGACTAATTTAA 59.869 43.478 8.79 0.00 34.97 1.52
1443 1478 4.114794 GCTAGGCGGACGACTAATTTAAA 58.885 43.478 8.79 0.00 34.97 1.52
1444 1479 4.026228 GCTAGGCGGACGACTAATTTAAAC 60.026 45.833 8.79 0.00 34.97 2.01
1445 1480 2.925563 AGGCGGACGACTAATTTAAACG 59.074 45.455 0.00 0.00 0.00 3.60
1446 1481 2.923020 GGCGGACGACTAATTTAAACGA 59.077 45.455 0.00 0.00 0.00 3.85
1447 1482 3.241773 GGCGGACGACTAATTTAAACGAC 60.242 47.826 0.00 0.00 0.00 4.34
1448 1483 3.241773 GCGGACGACTAATTTAAACGACC 60.242 47.826 0.00 4.81 36.05 4.79
1449 1484 3.919804 CGGACGACTAATTTAAACGACCA 59.080 43.478 13.76 0.00 38.27 4.02
1450 1485 4.030977 CGGACGACTAATTTAAACGACCAG 59.969 45.833 13.76 6.09 38.27 4.00
1451 1486 4.925646 GGACGACTAATTTAAACGACCAGT 59.074 41.667 10.26 1.80 38.27 4.00
1452 1487 5.164022 GGACGACTAATTTAAACGACCAGTG 60.164 44.000 10.26 0.00 38.27 3.66
1453 1488 4.151157 ACGACTAATTTAAACGACCAGTGC 59.849 41.667 2.60 0.00 0.00 4.40
1454 1489 4.150980 CGACTAATTTAAACGACCAGTGCA 59.849 41.667 0.00 0.00 0.00 4.57
1455 1490 5.352643 ACTAATTTAAACGACCAGTGCAC 57.647 39.130 9.40 9.40 0.00 4.57
1456 1491 2.961522 ATTTAAACGACCAGTGCACG 57.038 45.000 12.01 6.45 0.00 5.34
1457 1492 1.937278 TTTAAACGACCAGTGCACGA 58.063 45.000 12.01 0.00 0.00 4.35
1458 1493 1.210870 TTAAACGACCAGTGCACGAC 58.789 50.000 12.01 3.51 0.00 4.34
1459 1494 0.935831 TAAACGACCAGTGCACGACG 60.936 55.000 12.01 16.92 0.00 5.12
1460 1495 2.616786 AAACGACCAGTGCACGACGA 62.617 55.000 24.88 0.00 0.00 4.20
1461 1496 2.126463 CGACCAGTGCACGACGAT 60.126 61.111 12.01 0.00 0.00 3.73
1462 1497 2.436539 CGACCAGTGCACGACGATG 61.437 63.158 12.01 3.42 0.00 3.84
1463 1498 1.080772 GACCAGTGCACGACGATGA 60.081 57.895 12.01 0.00 0.00 2.92
1464 1499 0.666274 GACCAGTGCACGACGATGAA 60.666 55.000 12.01 0.00 0.00 2.57
1465 1500 0.037326 ACCAGTGCACGACGATGAAT 60.037 50.000 12.01 0.00 0.00 2.57
1466 1501 0.647410 CCAGTGCACGACGATGAATC 59.353 55.000 12.01 0.00 0.00 2.52
1467 1502 0.647410 CAGTGCACGACGATGAATCC 59.353 55.000 12.01 0.00 0.00 3.01
1468 1503 0.460284 AGTGCACGACGATGAATCCC 60.460 55.000 12.01 0.00 0.00 3.85
1469 1504 0.739462 GTGCACGACGATGAATCCCA 60.739 55.000 0.00 0.00 0.00 4.37
1470 1505 0.460109 TGCACGACGATGAATCCCAG 60.460 55.000 0.00 0.00 0.00 4.45
1471 1506 1.766143 GCACGACGATGAATCCCAGC 61.766 60.000 0.00 0.00 0.00 4.85
1472 1507 1.144057 ACGACGATGAATCCCAGCC 59.856 57.895 0.00 0.00 0.00 4.85
1473 1508 1.143838 CGACGATGAATCCCAGCCA 59.856 57.895 0.00 0.00 0.00 4.75
1474 1509 1.154205 CGACGATGAATCCCAGCCAC 61.154 60.000 0.00 0.00 0.00 5.01
1475 1510 0.815615 GACGATGAATCCCAGCCACC 60.816 60.000 0.00 0.00 0.00 4.61
1476 1511 1.889105 CGATGAATCCCAGCCACCG 60.889 63.158 0.00 0.00 0.00 4.94
1477 1512 1.526887 GATGAATCCCAGCCACCGA 59.473 57.895 0.00 0.00 0.00 4.69
1478 1513 0.107214 GATGAATCCCAGCCACCGAA 60.107 55.000 0.00 0.00 0.00 4.30
1479 1514 0.331278 ATGAATCCCAGCCACCGAAA 59.669 50.000 0.00 0.00 0.00 3.46
1480 1515 0.608035 TGAATCCCAGCCACCGAAAC 60.608 55.000 0.00 0.00 0.00 2.78
1481 1516 0.322546 GAATCCCAGCCACCGAAACT 60.323 55.000 0.00 0.00 0.00 2.66
1482 1517 0.322546 AATCCCAGCCACCGAAACTC 60.323 55.000 0.00 0.00 0.00 3.01
1483 1518 2.521958 ATCCCAGCCACCGAAACTCG 62.522 60.000 0.00 0.00 40.07 4.18
1484 1519 2.030562 CCAGCCACCGAAACTCGT 59.969 61.111 0.00 0.00 38.40 4.18
1485 1520 2.027625 CCAGCCACCGAAACTCGTC 61.028 63.158 0.00 0.00 38.40 4.20
1486 1521 2.027625 CAGCCACCGAAACTCGTCC 61.028 63.158 0.00 0.00 38.40 4.79
1487 1522 2.029964 GCCACCGAAACTCGTCCA 59.970 61.111 0.00 0.00 38.40 4.02
1488 1523 2.315386 GCCACCGAAACTCGTCCAC 61.315 63.158 0.00 0.00 38.40 4.02
1489 1524 1.068417 CCACCGAAACTCGTCCACA 59.932 57.895 0.00 0.00 38.40 4.17
1490 1525 0.944311 CCACCGAAACTCGTCCACAG 60.944 60.000 0.00 0.00 38.40 3.66
1491 1526 1.300697 ACCGAAACTCGTCCACAGC 60.301 57.895 0.00 0.00 38.40 4.40
1492 1527 2.027625 CCGAAACTCGTCCACAGCC 61.028 63.158 0.00 0.00 38.40 4.85
1493 1528 2.027625 CGAAACTCGTCCACAGCCC 61.028 63.158 0.00 0.00 34.72 5.19
1494 1529 1.070786 GAAACTCGTCCACAGCCCA 59.929 57.895 0.00 0.00 0.00 5.36
1495 1530 1.227853 AAACTCGTCCACAGCCCAC 60.228 57.895 0.00 0.00 0.00 4.61
1496 1531 1.978455 AAACTCGTCCACAGCCCACA 61.978 55.000 0.00 0.00 0.00 4.17
1497 1532 2.357517 CTCGTCCACAGCCCACAC 60.358 66.667 0.00 0.00 0.00 3.82
1498 1533 2.842462 TCGTCCACAGCCCACACT 60.842 61.111 0.00 0.00 0.00 3.55
1499 1534 2.357517 CGTCCACAGCCCACACTC 60.358 66.667 0.00 0.00 0.00 3.51
1500 1535 2.872388 CGTCCACAGCCCACACTCT 61.872 63.158 0.00 0.00 0.00 3.24
1501 1536 1.302033 GTCCACAGCCCACACTCTG 60.302 63.158 0.00 0.00 36.45 3.35
1502 1537 1.766059 TCCACAGCCCACACTCTGT 60.766 57.895 0.00 0.00 43.67 3.41
1503 1538 1.149174 CCACAGCCCACACTCTGTT 59.851 57.895 0.00 0.00 41.19 3.16
1504 1539 0.886490 CCACAGCCCACACTCTGTTC 60.886 60.000 0.00 0.00 41.19 3.18
1505 1540 1.069765 ACAGCCCACACTCTGTTCG 59.930 57.895 0.00 0.00 40.32 3.95
1506 1541 2.031163 AGCCCACACTCTGTTCGC 59.969 61.111 0.00 0.00 0.00 4.70
1507 1542 2.031163 GCCCACACTCTGTTCGCT 59.969 61.111 0.00 0.00 0.00 4.93
1508 1543 2.320587 GCCCACACTCTGTTCGCTG 61.321 63.158 0.00 0.00 0.00 5.18
1509 1544 1.669115 CCCACACTCTGTTCGCTGG 60.669 63.158 0.00 0.00 0.00 4.85
1510 1545 1.367471 CCACACTCTGTTCGCTGGA 59.633 57.895 0.00 0.00 0.00 3.86
1511 1546 0.036952 CCACACTCTGTTCGCTGGAT 60.037 55.000 0.00 0.00 0.00 3.41
1512 1547 1.609061 CCACACTCTGTTCGCTGGATT 60.609 52.381 0.00 0.00 0.00 3.01
1513 1548 2.146342 CACACTCTGTTCGCTGGATTT 58.854 47.619 0.00 0.00 0.00 2.17
1514 1549 3.325870 CACACTCTGTTCGCTGGATTTA 58.674 45.455 0.00 0.00 0.00 1.40
1515 1550 3.935203 CACACTCTGTTCGCTGGATTTAT 59.065 43.478 0.00 0.00 0.00 1.40
1516 1551 4.393062 CACACTCTGTTCGCTGGATTTATT 59.607 41.667 0.00 0.00 0.00 1.40
1517 1552 4.393062 ACACTCTGTTCGCTGGATTTATTG 59.607 41.667 0.00 0.00 0.00 1.90
1518 1553 4.393062 CACTCTGTTCGCTGGATTTATTGT 59.607 41.667 0.00 0.00 0.00 2.71
1519 1554 4.631813 ACTCTGTTCGCTGGATTTATTGTC 59.368 41.667 0.00 0.00 0.00 3.18
1520 1555 3.616821 TCTGTTCGCTGGATTTATTGTCG 59.383 43.478 0.00 0.00 0.00 4.35
1521 1556 3.331150 TGTTCGCTGGATTTATTGTCGT 58.669 40.909 0.00 0.00 0.00 4.34
1522 1557 3.749088 TGTTCGCTGGATTTATTGTCGTT 59.251 39.130 0.00 0.00 0.00 3.85
1523 1558 4.142988 TGTTCGCTGGATTTATTGTCGTTC 60.143 41.667 0.00 0.00 0.00 3.95
1524 1559 3.591023 TCGCTGGATTTATTGTCGTTCA 58.409 40.909 0.00 0.00 0.00 3.18
1525 1560 4.188462 TCGCTGGATTTATTGTCGTTCAT 58.812 39.130 0.00 0.00 0.00 2.57
1526 1561 4.033932 TCGCTGGATTTATTGTCGTTCATG 59.966 41.667 0.00 0.00 0.00 3.07
1527 1562 4.601019 GCTGGATTTATTGTCGTTCATGG 58.399 43.478 0.00 0.00 0.00 3.66
1528 1563 4.335315 GCTGGATTTATTGTCGTTCATGGA 59.665 41.667 0.00 0.00 0.00 3.41
1529 1564 5.009010 GCTGGATTTATTGTCGTTCATGGAT 59.991 40.000 0.00 0.00 0.00 3.41
1530 1565 6.618287 TGGATTTATTGTCGTTCATGGATC 57.382 37.500 0.00 0.00 0.00 3.36
1531 1566 5.236263 TGGATTTATTGTCGTTCATGGATCG 59.764 40.000 0.00 0.00 0.00 3.69
1532 1567 5.334105 GGATTTATTGTCGTTCATGGATCGG 60.334 44.000 0.00 0.00 0.00 4.18
1533 1568 1.299541 ATTGTCGTTCATGGATCGGC 58.700 50.000 0.00 0.00 31.23 5.54
1534 1569 0.742990 TTGTCGTTCATGGATCGGCC 60.743 55.000 0.00 0.00 29.74 6.13
1542 1577 4.883240 TGGATCGGCCACATGATG 57.117 55.556 2.24 0.00 43.33 3.07
1543 1578 1.914475 TGGATCGGCCACATGATGT 59.086 52.632 2.24 0.00 43.33 3.06
1544 1579 0.179048 TGGATCGGCCACATGATGTC 60.179 55.000 2.24 0.00 43.33 3.06
1545 1580 1.224069 GGATCGGCCACATGATGTCG 61.224 60.000 2.24 2.98 36.34 4.35
1546 1581 0.530650 GATCGGCCACATGATGTCGT 60.531 55.000 2.24 0.00 0.00 4.34
1547 1582 0.811219 ATCGGCCACATGATGTCGTG 60.811 55.000 2.24 0.80 38.76 4.35
1548 1583 1.741401 CGGCCACATGATGTCGTGT 60.741 57.895 2.24 2.10 46.18 4.49
1554 1589 2.084610 ACATGATGTCGTGTGTGGAG 57.915 50.000 7.05 0.00 43.82 3.86
1555 1590 0.723414 CATGATGTCGTGTGTGGAGC 59.277 55.000 0.00 0.00 0.00 4.70
1556 1591 0.321346 ATGATGTCGTGTGTGGAGCA 59.679 50.000 0.00 0.00 0.00 4.26
1557 1592 0.105778 TGATGTCGTGTGTGGAGCAA 59.894 50.000 0.00 0.00 0.00 3.91
1558 1593 1.270785 TGATGTCGTGTGTGGAGCAAT 60.271 47.619 0.00 0.00 0.00 3.56
1559 1594 1.806542 GATGTCGTGTGTGGAGCAATT 59.193 47.619 0.00 0.00 0.00 2.32
1560 1595 1.225855 TGTCGTGTGTGGAGCAATTC 58.774 50.000 0.00 0.00 0.00 2.17
1561 1596 0.517316 GTCGTGTGTGGAGCAATTCC 59.483 55.000 0.00 0.00 46.98 3.01
1576 1611 1.369625 ATTCCGTTCCGTCAGAATGC 58.630 50.000 0.00 0.00 39.76 3.56
1713 1748 4.356979 CCTACTCGGCCAAGAGGA 57.643 61.111 11.78 2.71 42.31 3.71
1726 1761 4.991687 GGCCAAGAGGAATCTTACTTATCG 59.008 45.833 0.00 0.00 36.89 2.92
1778 1813 0.313987 CTCGAACCTGGGGCAAAAAC 59.686 55.000 0.00 0.00 0.00 2.43
1784 1819 0.821711 CCTGGGGCAAAAACGTCTCA 60.822 55.000 0.00 0.00 0.00 3.27
1812 1847 5.181245 GTGCTACCATGTGACAGTTACATTT 59.819 40.000 8.22 2.04 36.67 2.32
1844 1879 0.521291 GCGTCTTTGCTGGTAATGCA 59.479 50.000 0.00 0.00 38.80 3.96
1911 1946 5.219343 CATGGAGAGCCTACATGTGATTA 57.781 43.478 9.11 0.00 45.09 1.75
1912 1947 5.614308 CATGGAGAGCCTACATGTGATTAA 58.386 41.667 9.11 0.00 45.09 1.40
2070 2105 2.092968 TGTCATGGTGGAACTAGATGGC 60.093 50.000 0.00 0.00 36.74 4.40
2077 2112 1.153369 GAACTAGATGGCTGCCGCA 60.153 57.895 14.98 0.00 38.10 5.69
2082 2117 1.617018 TAGATGGCTGCCGCAGAAGT 61.617 55.000 24.80 8.00 38.10 3.01
2093 2128 3.066900 TGCCGCAGAAGTCTATTAGTCTC 59.933 47.826 0.00 0.00 0.00 3.36
2104 2139 7.484993 AGTCTATTAGTCTCGAGCTAGGATA 57.515 40.000 7.81 7.58 0.00 2.59
2115 2150 3.561528 CGAGCTAGGATATGGGAGTGGTA 60.562 52.174 0.00 0.00 0.00 3.25
2116 2151 4.615513 GAGCTAGGATATGGGAGTGGTAT 58.384 47.826 0.00 0.00 0.00 2.73
2117 2152 5.026790 GAGCTAGGATATGGGAGTGGTATT 58.973 45.833 0.00 0.00 0.00 1.89
2125 2160 7.624077 AGGATATGGGAGTGGTATTATAAGGAC 59.376 40.741 0.00 0.00 0.00 3.85
2129 2164 5.662208 TGGGAGTGGTATTATAAGGACGAAA 59.338 40.000 0.00 0.00 0.00 3.46
2146 2181 4.595986 ACGAAACAAGCTATATTGGGGTT 58.404 39.130 0.00 0.00 34.36 4.11
2158 2193 1.401318 TTGGGGTTTGACGAGGACGA 61.401 55.000 0.00 0.00 42.66 4.20
2160 2195 1.530013 GGGGTTTGACGAGGACGAGA 61.530 60.000 0.00 0.00 42.66 4.04
2163 2198 1.993370 GGTTTGACGAGGACGAGAATG 59.007 52.381 0.00 0.00 42.66 2.67
2164 2199 1.390463 GTTTGACGAGGACGAGAATGC 59.610 52.381 0.00 0.00 42.66 3.56
2183 2218 1.131315 GCAATCTTCTTTCGAGTGGGC 59.869 52.381 0.00 0.00 0.00 5.36
2198 2233 3.484407 AGTGGGCAGCAATATCTTCATC 58.516 45.455 0.00 0.00 0.00 2.92
2202 2237 2.481952 GGCAGCAATATCTTCATCGTCC 59.518 50.000 0.00 0.00 0.00 4.79
2204 2239 3.750130 GCAGCAATATCTTCATCGTCCAT 59.250 43.478 0.00 0.00 0.00 3.41
2224 2259 6.599244 GTCCATCTTGTATCAATGAAGTCCAA 59.401 38.462 0.00 0.00 0.00 3.53
2225 2260 6.825213 TCCATCTTGTATCAATGAAGTCCAAG 59.175 38.462 7.68 7.68 0.00 3.61
2250 2285 8.763601 AGAAACTTTGGAGAAGCTATACTACAT 58.236 33.333 0.00 0.00 0.00 2.29
2312 2347 8.872845 GGTAATTGCTCATCTTTAAATTGTTGG 58.127 33.333 0.00 0.00 0.00 3.77
2313 2348 9.638239 GTAATTGCTCATCTTTAAATTGTTGGA 57.362 29.630 0.00 0.00 0.00 3.53
2314 2349 8.767478 AATTGCTCATCTTTAAATTGTTGGAG 57.233 30.769 0.00 0.00 0.00 3.86
2316 2351 7.288810 TGCTCATCTTTAAATTGTTGGAGTT 57.711 32.000 0.00 0.00 0.00 3.01
2317 2352 8.402798 TGCTCATCTTTAAATTGTTGGAGTTA 57.597 30.769 0.00 0.00 0.00 2.24
2318 2353 9.023962 TGCTCATCTTTAAATTGTTGGAGTTAT 57.976 29.630 0.00 0.00 0.00 1.89
2388 2505 4.963276 TGTTCTTTGAAGTGTTCACCAG 57.037 40.909 0.00 0.00 39.87 4.00
2391 2508 5.123820 TGTTCTTTGAAGTGTTCACCAGAAG 59.876 40.000 9.35 3.02 38.73 2.85
2427 2544 8.445588 AGTTATCCATTTACCTTTATACCTGGG 58.554 37.037 0.00 0.00 0.00 4.45
2428 2545 5.056553 TCCATTTACCTTTATACCTGGGC 57.943 43.478 0.00 0.00 0.00 5.36
2443 2560 3.514309 ACCTGGGCGTAGGAATATCATAC 59.486 47.826 12.70 0.00 40.42 2.39
2454 2571 7.824289 CGTAGGAATATCATACCCACATCATTT 59.176 37.037 0.00 0.00 30.57 2.32
2467 2584 8.472007 ACCCACATCATTTTAAAAGTCTTACA 57.528 30.769 6.79 0.00 0.00 2.41
2468 2585 9.088987 ACCCACATCATTTTAAAAGTCTTACAT 57.911 29.630 6.79 0.00 0.00 2.29
2469 2586 9.927668 CCCACATCATTTTAAAAGTCTTACATT 57.072 29.630 6.79 0.00 0.00 2.71
2527 2644 6.278172 TGTTTAAGCCATCAACATGCATTA 57.722 33.333 0.00 0.00 0.00 1.90
2601 2718 7.387643 AGGTAGAGAAGTCACAGGTAATTTTC 58.612 38.462 0.00 0.00 0.00 2.29
2606 2723 6.542821 AGAAGTCACAGGTAATTTTCATGGA 58.457 36.000 0.00 0.00 0.00 3.41
2642 2759 9.243105 ACCATAATATTTTAGAATTCCGGGATG 57.757 33.333 0.00 0.00 0.00 3.51
2655 2772 3.386063 TCCGGGATGTAAAGGGAACATA 58.614 45.455 0.00 0.00 37.69 2.29
2709 2827 9.453572 TCATAGCAAGAGTTTTCATTAGACATT 57.546 29.630 0.00 0.00 0.00 2.71
2763 2881 5.464030 AAACTTACTCGAACTTGCCTCTA 57.536 39.130 0.00 0.00 0.00 2.43
2764 2882 4.705337 ACTTACTCGAACTTGCCTCTAG 57.295 45.455 0.00 0.00 0.00 2.43
2765 2883 3.119424 ACTTACTCGAACTTGCCTCTAGC 60.119 47.826 0.00 0.00 44.14 3.42
2766 2884 1.551452 ACTCGAACTTGCCTCTAGCT 58.449 50.000 0.00 0.00 44.23 3.32
2780 2898 5.586243 TGCCTCTAGCTTCATGATGTTTTAC 59.414 40.000 10.05 0.00 44.23 2.01
2791 2909 9.916397 CTTCATGATGTTTTACGATAAGGTAAC 57.084 33.333 0.00 0.00 32.42 2.50
2792 2910 9.438228 TTCATGATGTTTTACGATAAGGTAACA 57.562 29.630 0.00 0.00 41.41 2.41
2793 2911 9.093970 TCATGATGTTTTACGATAAGGTAACAG 57.906 33.333 0.00 0.00 41.41 3.16
2818 2936 8.200792 AGTATTCTTCTTCATGTAGACATCACC 58.799 37.037 0.90 0.00 33.61 4.02
2819 2937 4.998788 TCTTCTTCATGTAGACATCACCG 58.001 43.478 0.90 0.00 33.61 4.94
2848 2972 8.603242 TGAAATTTGTGGAGAGTAAGAGTAAC 57.397 34.615 0.00 0.00 0.00 2.50
2851 2975 6.726490 TTTGTGGAGAGTAAGAGTAACAGT 57.274 37.500 0.00 0.00 0.00 3.55
2857 2981 8.741841 GTGGAGAGTAAGAGTAACAGTAAGATT 58.258 37.037 0.00 0.00 0.00 2.40
2862 2986 8.123639 AGTAAGAGTAACAGTAAGATTGCAGA 57.876 34.615 0.00 0.00 0.00 4.26
2866 2990 5.725362 AGTAACAGTAAGATTGCAGACCTC 58.275 41.667 0.00 0.00 0.00 3.85
2869 2993 3.834813 ACAGTAAGATTGCAGACCTCTGA 59.165 43.478 6.49 0.00 46.59 3.27
2870 2994 4.081752 ACAGTAAGATTGCAGACCTCTGAG 60.082 45.833 6.49 0.00 46.59 3.35
2876 3000 0.966179 TGCAGACCTCTGAGCGTTTA 59.034 50.000 6.49 0.00 46.59 2.01
2881 3005 2.891580 AGACCTCTGAGCGTTTAGTTGA 59.108 45.455 0.00 0.00 0.00 3.18
2890 3014 6.365247 TCTGAGCGTTTAGTTGAATTACAGAC 59.635 38.462 0.00 0.00 0.00 3.51
2901 3026 8.798859 AGTTGAATTACAGACAGAATTAGCAT 57.201 30.769 0.00 0.00 0.00 3.79
2906 3031 9.713740 GAATTACAGACAGAATTAGCATTCAAG 57.286 33.333 0.19 0.00 41.37 3.02
2907 3032 8.798859 ATTACAGACAGAATTAGCATTCAAGT 57.201 30.769 0.19 0.00 41.37 3.16
2913 3038 8.097038 AGACAGAATTAGCATTCAAGTAGTTGA 58.903 33.333 8.98 8.98 41.37 3.18
2914 3039 8.034058 ACAGAATTAGCATTCAAGTAGTTGAC 57.966 34.615 12.62 2.15 42.60 3.18
2920 3045 4.762251 AGCATTCAAGTAGTTGACTTTCCC 59.238 41.667 12.62 0.00 46.79 3.97
2921 3046 4.518970 GCATTCAAGTAGTTGACTTTCCCA 59.481 41.667 12.62 0.00 46.79 4.37
2936 3061 5.685728 ACTTTCCCATTCCTACTTATGCTC 58.314 41.667 0.00 0.00 0.00 4.26
2938 3063 5.552870 TTCCCATTCCTACTTATGCTCTC 57.447 43.478 0.00 0.00 0.00 3.20
2943 3068 6.438741 CCCATTCCTACTTATGCTCTCTATCA 59.561 42.308 0.00 0.00 0.00 2.15
2944 3069 7.038729 CCCATTCCTACTTATGCTCTCTATCAA 60.039 40.741 0.00 0.00 0.00 2.57
2945 3070 8.538701 CCATTCCTACTTATGCTCTCTATCAAT 58.461 37.037 0.00 0.00 0.00 2.57
2946 3071 9.941325 CATTCCTACTTATGCTCTCTATCAATT 57.059 33.333 0.00 0.00 0.00 2.32
2947 3072 9.941325 ATTCCTACTTATGCTCTCTATCAATTG 57.059 33.333 0.00 0.00 0.00 2.32
2948 3073 8.484214 TCCTACTTATGCTCTCTATCAATTGT 57.516 34.615 5.13 0.00 0.00 2.71
2949 3074 8.928448 TCCTACTTATGCTCTCTATCAATTGTT 58.072 33.333 5.13 0.00 0.00 2.83
2950 3075 9.202273 CCTACTTATGCTCTCTATCAATTGTTC 57.798 37.037 5.13 0.00 0.00 3.18
2951 3076 9.755804 CTACTTATGCTCTCTATCAATTGTTCA 57.244 33.333 5.13 0.00 0.00 3.18
2952 3077 8.430801 ACTTATGCTCTCTATCAATTGTTCAC 57.569 34.615 5.13 0.00 0.00 3.18
2953 3078 8.263640 ACTTATGCTCTCTATCAATTGTTCACT 58.736 33.333 5.13 0.00 0.00 3.41
2954 3079 6.922247 ATGCTCTCTATCAATTGTTCACTG 57.078 37.500 5.13 0.00 0.00 3.66
2955 3080 4.633126 TGCTCTCTATCAATTGTTCACTGC 59.367 41.667 5.13 4.53 0.00 4.40
2956 3081 4.874966 GCTCTCTATCAATTGTTCACTGCT 59.125 41.667 5.13 0.00 0.00 4.24
2957 3082 5.353678 GCTCTCTATCAATTGTTCACTGCTT 59.646 40.000 5.13 0.00 0.00 3.91
2958 3083 6.536582 GCTCTCTATCAATTGTTCACTGCTTA 59.463 38.462 5.13 0.00 0.00 3.09
2959 3084 7.065085 GCTCTCTATCAATTGTTCACTGCTTAA 59.935 37.037 5.13 0.00 0.00 1.85
2960 3085 8.846943 TCTCTATCAATTGTTCACTGCTTAAA 57.153 30.769 5.13 0.00 0.00 1.52
2961 3086 9.283768 TCTCTATCAATTGTTCACTGCTTAAAA 57.716 29.630 5.13 0.00 0.00 1.52
2962 3087 9.897744 CTCTATCAATTGTTCACTGCTTAAAAA 57.102 29.630 5.13 0.00 0.00 1.94
3012 3137 4.959596 ACTTCTGCTGATAATGCAAGTG 57.040 40.909 0.00 0.00 40.13 3.16
3013 3138 3.128242 ACTTCTGCTGATAATGCAAGTGC 59.872 43.478 0.00 0.00 40.13 4.40
3018 3143 2.789092 GCTGATAATGCAAGTGCGACAC 60.789 50.000 0.00 2.28 45.83 3.67
3033 3158 0.179067 GACACACGGTGGAGACCAAA 60.179 55.000 13.48 0.00 43.33 3.28
3062 3187 1.004560 TCAAGGAGGAAGCGTGCAG 60.005 57.895 0.00 0.00 0.00 4.41
3068 3193 1.936547 GGAGGAAGCGTGCAGATTTAG 59.063 52.381 0.00 0.00 0.00 1.85
3069 3194 1.936547 GAGGAAGCGTGCAGATTTAGG 59.063 52.381 0.00 0.00 0.00 2.69
3070 3195 0.378610 GGAAGCGTGCAGATTTAGGC 59.621 55.000 0.00 0.00 0.00 3.93
3071 3196 1.086696 GAAGCGTGCAGATTTAGGCA 58.913 50.000 0.00 0.00 37.77 4.75
3072 3197 1.468520 GAAGCGTGCAGATTTAGGCAA 59.531 47.619 0.00 0.00 42.45 4.52
3073 3198 0.804989 AGCGTGCAGATTTAGGCAAC 59.195 50.000 0.00 0.00 42.45 4.17
3074 3199 0.521242 GCGTGCAGATTTAGGCAACG 60.521 55.000 0.00 0.00 42.45 4.10
3075 3200 0.796312 CGTGCAGATTTAGGCAACGT 59.204 50.000 0.00 0.00 42.45 3.99
3076 3201 1.196808 CGTGCAGATTTAGGCAACGTT 59.803 47.619 0.00 0.00 42.45 3.99
3077 3202 2.724839 CGTGCAGATTTAGGCAACGTTC 60.725 50.000 0.00 0.00 42.45 3.95
3078 3203 2.225491 GTGCAGATTTAGGCAACGTTCA 59.775 45.455 0.00 0.00 42.45 3.18
3079 3204 2.483877 TGCAGATTTAGGCAACGTTCAG 59.516 45.455 0.00 0.00 46.39 3.02
3080 3205 2.729156 GCAGATTTAGGCAACGTTCAGC 60.729 50.000 0.00 0.00 46.39 4.26
3081 3206 2.744202 CAGATTTAGGCAACGTTCAGCT 59.256 45.455 10.07 0.00 46.39 4.24
3082 3207 3.003480 AGATTTAGGCAACGTTCAGCTC 58.997 45.455 10.07 0.75 46.39 4.09
3083 3208 1.519408 TTTAGGCAACGTTCAGCTCC 58.481 50.000 10.07 2.09 46.39 4.70
3084 3209 0.685097 TTAGGCAACGTTCAGCTCCT 59.315 50.000 10.07 8.61 46.39 3.69
3085 3210 0.246635 TAGGCAACGTTCAGCTCCTC 59.753 55.000 10.07 0.00 46.39 3.71
3086 3211 1.004440 GGCAACGTTCAGCTCCTCT 60.004 57.895 10.07 0.00 0.00 3.69
3087 3212 1.016653 GGCAACGTTCAGCTCCTCTC 61.017 60.000 10.07 0.00 0.00 3.20
3088 3213 1.016653 GCAACGTTCAGCTCCTCTCC 61.017 60.000 0.00 0.00 0.00 3.71
3089 3214 0.734253 CAACGTTCAGCTCCTCTCCG 60.734 60.000 0.00 0.00 0.00 4.63
3090 3215 2.202676 CGTTCAGCTCCTCTCCGC 60.203 66.667 0.00 0.00 0.00 5.54
3091 3216 2.705821 CGTTCAGCTCCTCTCCGCT 61.706 63.158 0.00 0.00 36.83 5.52
3092 3217 1.140804 GTTCAGCTCCTCTCCGCTC 59.859 63.158 0.00 0.00 33.45 5.03
3093 3218 2.055042 TTCAGCTCCTCTCCGCTCC 61.055 63.158 0.00 0.00 33.45 4.70
3094 3219 3.535962 CAGCTCCTCTCCGCTCCC 61.536 72.222 0.00 0.00 33.45 4.30
3095 3220 3.749870 AGCTCCTCTCCGCTCCCT 61.750 66.667 0.00 0.00 0.00 4.20
3096 3221 3.223589 GCTCCTCTCCGCTCCCTC 61.224 72.222 0.00 0.00 0.00 4.30
3097 3222 2.520741 CTCCTCTCCGCTCCCTCC 60.521 72.222 0.00 0.00 0.00 4.30
3098 3223 3.347590 TCCTCTCCGCTCCCTCCA 61.348 66.667 0.00 0.00 0.00 3.86
3099 3224 3.151022 CCTCTCCGCTCCCTCCAC 61.151 72.222 0.00 0.00 0.00 4.02
3100 3225 2.043450 CTCTCCGCTCCCTCCACT 60.043 66.667 0.00 0.00 0.00 4.00
3101 3226 2.043852 TCTCCGCTCCCTCCACTC 60.044 66.667 0.00 0.00 0.00 3.51
3102 3227 3.151022 CTCCGCTCCCTCCACTCC 61.151 72.222 0.00 0.00 0.00 3.85
3106 3231 3.844090 GCTCCCTCCACTCCGCTC 61.844 72.222 0.00 0.00 0.00 5.03
3107 3232 3.151022 CTCCCTCCACTCCGCTCC 61.151 72.222 0.00 0.00 0.00 4.70
3110 3235 3.068691 CCTCCACTCCGCTCCGAA 61.069 66.667 0.00 0.00 0.00 4.30
3111 3236 2.492090 CTCCACTCCGCTCCGAAG 59.508 66.667 0.00 0.00 0.00 3.79
3112 3237 3.708220 CTCCACTCCGCTCCGAAGC 62.708 68.421 0.00 0.00 45.56 3.86
3124 3249 3.211288 CGAAGCGGACCAGGATCT 58.789 61.111 0.00 0.00 0.00 2.75
3125 3250 2.415825 CGAAGCGGACCAGGATCTA 58.584 57.895 0.00 0.00 0.00 1.98
3126 3251 0.312416 CGAAGCGGACCAGGATCTAG 59.688 60.000 0.00 0.00 0.00 2.43
3127 3252 0.032815 GAAGCGGACCAGGATCTAGC 59.967 60.000 0.00 0.00 0.00 3.42
3128 3253 0.397816 AAGCGGACCAGGATCTAGCT 60.398 55.000 0.00 0.00 35.26 3.32
3129 3254 0.825840 AGCGGACCAGGATCTAGCTC 60.826 60.000 0.00 0.00 30.57 4.09
3130 3255 1.109920 GCGGACCAGGATCTAGCTCA 61.110 60.000 0.00 0.00 0.00 4.26
3131 3256 1.626686 CGGACCAGGATCTAGCTCAT 58.373 55.000 0.00 0.00 0.00 2.90
3132 3257 1.967066 CGGACCAGGATCTAGCTCATT 59.033 52.381 0.00 0.00 0.00 2.57
3133 3258 2.366916 CGGACCAGGATCTAGCTCATTT 59.633 50.000 0.00 0.00 0.00 2.32
3134 3259 3.181461 CGGACCAGGATCTAGCTCATTTT 60.181 47.826 0.00 0.00 0.00 1.82
3135 3260 4.384940 GGACCAGGATCTAGCTCATTTTC 58.615 47.826 0.00 0.00 0.00 2.29
3136 3261 4.141620 GGACCAGGATCTAGCTCATTTTCA 60.142 45.833 0.00 0.00 0.00 2.69
3137 3262 4.775236 ACCAGGATCTAGCTCATTTTCAC 58.225 43.478 0.00 0.00 0.00 3.18
3138 3263 3.806521 CCAGGATCTAGCTCATTTTCACG 59.193 47.826 0.00 0.00 0.00 4.35
3139 3264 3.806521 CAGGATCTAGCTCATTTTCACGG 59.193 47.826 0.00 0.00 0.00 4.94
3140 3265 3.706594 AGGATCTAGCTCATTTTCACGGA 59.293 43.478 0.00 0.00 0.00 4.69
3141 3266 4.054671 GGATCTAGCTCATTTTCACGGAG 58.945 47.826 0.00 0.00 0.00 4.63
3142 3267 4.202161 GGATCTAGCTCATTTTCACGGAGA 60.202 45.833 0.00 0.00 0.00 3.71
3143 3268 4.377839 TCTAGCTCATTTTCACGGAGAG 57.622 45.455 0.00 0.00 0.00 3.20
3144 3269 2.393271 AGCTCATTTTCACGGAGAGG 57.607 50.000 0.00 0.00 0.00 3.69
3145 3270 0.729690 GCTCATTTTCACGGAGAGGC 59.270 55.000 0.00 0.00 0.00 4.70
3146 3271 1.677217 GCTCATTTTCACGGAGAGGCT 60.677 52.381 0.00 0.00 0.00 4.58
3147 3272 2.418746 GCTCATTTTCACGGAGAGGCTA 60.419 50.000 0.00 0.00 0.00 3.93
3148 3273 3.861840 CTCATTTTCACGGAGAGGCTAA 58.138 45.455 0.00 0.00 0.00 3.09
3149 3274 4.253685 CTCATTTTCACGGAGAGGCTAAA 58.746 43.478 0.00 0.00 0.00 1.85
3150 3275 4.647611 TCATTTTCACGGAGAGGCTAAAA 58.352 39.130 0.00 0.00 0.00 1.52
3151 3276 5.253330 TCATTTTCACGGAGAGGCTAAAAT 58.747 37.500 0.00 0.00 0.00 1.82
3152 3277 5.710099 TCATTTTCACGGAGAGGCTAAAATT 59.290 36.000 0.00 0.00 0.00 1.82
3153 3278 6.882140 TCATTTTCACGGAGAGGCTAAAATTA 59.118 34.615 0.00 0.00 0.00 1.40
3154 3279 7.392113 TCATTTTCACGGAGAGGCTAAAATTAA 59.608 33.333 0.00 0.00 0.00 1.40
3155 3280 6.737254 TTTCACGGAGAGGCTAAAATTAAG 57.263 37.500 0.00 0.00 0.00 1.85
3156 3281 4.189231 TCACGGAGAGGCTAAAATTAAGC 58.811 43.478 4.50 4.50 39.33 3.09
3157 3282 4.081087 TCACGGAGAGGCTAAAATTAAGCT 60.081 41.667 11.33 0.00 39.97 3.74
3158 3283 4.271291 CACGGAGAGGCTAAAATTAAGCTC 59.729 45.833 11.33 7.81 39.97 4.09
3159 3284 3.810386 CGGAGAGGCTAAAATTAAGCTCC 59.190 47.826 11.33 9.72 39.97 4.70
3160 3285 4.683400 CGGAGAGGCTAAAATTAAGCTCCA 60.683 45.833 12.02 0.00 39.97 3.86
3161 3286 4.576873 GGAGAGGCTAAAATTAAGCTCCAC 59.423 45.833 11.33 4.31 39.97 4.02
3162 3287 5.179452 AGAGGCTAAAATTAAGCTCCACA 57.821 39.130 11.33 0.00 39.97 4.17
3163 3288 5.570320 AGAGGCTAAAATTAAGCTCCACAA 58.430 37.500 11.33 0.00 39.97 3.33
3164 3289 5.416013 AGAGGCTAAAATTAAGCTCCACAAC 59.584 40.000 11.33 0.00 39.97 3.32
3165 3290 5.325239 AGGCTAAAATTAAGCTCCACAACT 58.675 37.500 11.33 0.00 39.97 3.16
3166 3291 5.416013 AGGCTAAAATTAAGCTCCACAACTC 59.584 40.000 11.33 0.00 39.97 3.01
3167 3292 5.393135 GGCTAAAATTAAGCTCCACAACTCC 60.393 44.000 11.33 0.00 39.97 3.85
3168 3293 4.766404 AAAATTAAGCTCCACAACTCCG 57.234 40.909 0.00 0.00 0.00 4.63
3169 3294 1.739067 ATTAAGCTCCACAACTCCGC 58.261 50.000 0.00 0.00 0.00 5.54
3170 3295 0.669318 TTAAGCTCCACAACTCCGCG 60.669 55.000 0.00 0.00 0.00 6.46
3171 3296 2.501223 TAAGCTCCACAACTCCGCGG 62.501 60.000 22.12 22.12 0.00 6.46
3172 3297 4.373116 GCTCCACAACTCCGCGGA 62.373 66.667 29.03 29.03 0.00 5.54
3173 3298 2.125912 CTCCACAACTCCGCGGAG 60.126 66.667 45.26 45.26 46.91 4.63
3185 3310 3.510846 GCGGAGTTAGAGCGGAGA 58.489 61.111 0.00 0.00 0.00 3.71
3186 3311 1.357334 GCGGAGTTAGAGCGGAGAG 59.643 63.158 0.00 0.00 0.00 3.20
3187 3312 2.026522 CGGAGTTAGAGCGGAGAGG 58.973 63.158 0.00 0.00 0.00 3.69
3188 3313 0.464013 CGGAGTTAGAGCGGAGAGGA 60.464 60.000 0.00 0.00 0.00 3.71
3189 3314 1.314730 GGAGTTAGAGCGGAGAGGAG 58.685 60.000 0.00 0.00 0.00 3.69
3190 3315 1.314730 GAGTTAGAGCGGAGAGGAGG 58.685 60.000 0.00 0.00 0.00 4.30
3191 3316 0.106419 AGTTAGAGCGGAGAGGAGGG 60.106 60.000 0.00 0.00 0.00 4.30
3192 3317 0.106619 GTTAGAGCGGAGAGGAGGGA 60.107 60.000 0.00 0.00 0.00 4.20
3193 3318 0.854218 TTAGAGCGGAGAGGAGGGAT 59.146 55.000 0.00 0.00 0.00 3.85
3194 3319 0.854218 TAGAGCGGAGAGGAGGGATT 59.146 55.000 0.00 0.00 0.00 3.01
3195 3320 0.469144 AGAGCGGAGAGGAGGGATTC 60.469 60.000 0.00 0.00 0.00 2.52
3204 3329 3.478540 GGAGGGATTCCGAACAAGG 57.521 57.895 0.00 0.00 35.91 3.61
3205 3330 0.748367 GGAGGGATTCCGAACAAGGC 60.748 60.000 0.00 0.00 35.91 4.35
3206 3331 0.748367 GAGGGATTCCGAACAAGGCC 60.748 60.000 0.00 0.00 38.33 5.19
3207 3332 1.208165 AGGGATTCCGAACAAGGCCT 61.208 55.000 0.00 0.00 38.33 5.19
3208 3333 0.323451 GGGATTCCGAACAAGGCCTT 60.323 55.000 13.78 13.78 0.00 4.35
3209 3334 1.064979 GGGATTCCGAACAAGGCCTTA 60.065 52.381 20.00 0.00 0.00 2.69
3210 3335 2.619590 GGGATTCCGAACAAGGCCTTAA 60.620 50.000 20.00 8.26 0.00 1.85
3211 3336 3.288092 GGATTCCGAACAAGGCCTTAAT 58.712 45.455 20.00 13.24 0.00 1.40
3212 3337 4.457466 GGATTCCGAACAAGGCCTTAATA 58.543 43.478 20.00 0.00 0.00 0.98
3213 3338 4.885325 GGATTCCGAACAAGGCCTTAATAA 59.115 41.667 20.00 7.45 0.00 1.40
3242 3367 3.131396 GGCACTGCCTGTGTGTATATAC 58.869 50.000 13.28 5.89 46.69 1.47
3318 3443 7.689446 AAGAAAGGTTGATTACTCTAAAGGC 57.311 36.000 0.00 0.00 0.00 4.35
3319 3444 7.021998 AGAAAGGTTGATTACTCTAAAGGCT 57.978 36.000 0.00 0.00 0.00 4.58
3320 3445 6.881602 AGAAAGGTTGATTACTCTAAAGGCTG 59.118 38.462 0.00 0.00 0.00 4.85
3321 3446 6.374417 AAGGTTGATTACTCTAAAGGCTGA 57.626 37.500 0.00 0.00 0.00 4.26
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
156 163 6.095300 TGGGTAAACATTGTCATGCATCTTAG 59.905 38.462 0.00 0.00 33.05 2.18
157 164 5.948758 TGGGTAAACATTGTCATGCATCTTA 59.051 36.000 0.00 0.00 33.05 2.10
221 228 5.776173 ACGATAGAGTTGAATGGGAGTAG 57.224 43.478 0.00 0.00 41.38 2.57
330 339 7.321271 GCGTATGATTACTGACAACATTATTGC 59.679 37.037 0.00 0.00 0.00 3.56
642 652 2.034221 GACAAAAGCTCCGGGCCT 59.966 61.111 0.84 0.00 43.05 5.19
694 704 9.317936 CTCAACTTGATGCTGTATATACTGAAA 57.682 33.333 20.42 9.97 0.00 2.69
717 727 1.697284 ACGGCTGATATGAGAGCTCA 58.303 50.000 17.77 2.23 44.59 4.26
786 796 2.754254 GGGCCGTGGGATTTGGTC 60.754 66.667 0.00 0.00 0.00 4.02
787 797 3.153629 TTGGGCCGTGGGATTTGGT 62.154 57.895 0.00 0.00 0.00 3.67
788 798 2.283532 TTGGGCCGTGGGATTTGG 60.284 61.111 0.00 0.00 0.00 3.28
789 799 3.005540 GCTTGGGCCGTGGGATTTG 62.006 63.158 0.00 0.00 0.00 2.32
790 800 2.679996 GCTTGGGCCGTGGGATTT 60.680 61.111 0.00 0.00 0.00 2.17
837 847 6.607198 CAGGGAAAGGATAGGCATTCTAAAAA 59.393 38.462 0.00 0.00 0.00 1.94
852 862 5.630069 GCAGAAGATATCAACAGGGAAAGGA 60.630 44.000 5.32 0.00 0.00 3.36
860 870 2.868583 CACGGGCAGAAGATATCAACAG 59.131 50.000 5.32 0.00 0.00 3.16
875 885 0.381801 AATTGCAATCGATCACGGGC 59.618 50.000 13.38 0.00 40.21 6.13
882 895 3.819337 CTGATCTGGGAATTGCAATCGAT 59.181 43.478 13.38 9.60 0.00 3.59
885 898 4.217983 GGATCTGATCTGGGAATTGCAATC 59.782 45.833 13.38 6.38 0.00 2.67
898 911 2.172293 GCTCAGGGTTTGGATCTGATCT 59.828 50.000 16.61 0.00 36.99 2.75
903 916 0.539051 CTCGCTCAGGGTTTGGATCT 59.461 55.000 0.00 0.00 0.00 2.75
908 921 3.121030 CGGCTCGCTCAGGGTTTG 61.121 66.667 0.00 0.00 0.00 2.93
936 966 4.025094 CGCTCATCACGATCGATATACAG 58.975 47.826 24.34 13.29 35.23 2.74
940 970 2.477021 GCTCGCTCATCACGATCGATAT 60.477 50.000 24.34 11.53 41.13 1.63
965 997 4.338539 GGCGTGTGGTCTCGTCGT 62.339 66.667 0.00 0.00 33.82 4.34
1164 1196 2.281276 GAAGGTTTCCGGTGGCGT 60.281 61.111 0.00 0.00 0.00 5.68
1174 1206 2.047179 GCCGAGGAGCGAAGGTTT 60.047 61.111 0.00 0.00 44.57 3.27
1270 1305 4.492160 CGAGCCGTAGCCTCGCAA 62.492 66.667 0.00 0.00 41.25 4.85
1324 1359 1.813513 CCCTCAGTGTGGTTCATGAC 58.186 55.000 10.26 0.00 0.00 3.06
1344 1379 0.802494 GGTCGTACACAATGGCCTTG 59.198 55.000 3.32 8.86 35.81 3.61
1386 1421 1.404843 ACTCCCGAGGAACTGCTATC 58.595 55.000 0.00 0.00 41.55 2.08
1414 1449 2.510238 GTCCGCCTAGCAGTGCTG 60.510 66.667 27.97 16.44 40.10 4.41
1415 1450 4.135153 CGTCCGCCTAGCAGTGCT 62.135 66.667 23.44 23.44 43.41 4.40
1416 1451 4.129737 TCGTCCGCCTAGCAGTGC 62.130 66.667 7.13 7.13 0.00 4.40
1417 1452 1.374343 TAGTCGTCCGCCTAGCAGTG 61.374 60.000 0.00 0.00 0.00 3.66
1418 1453 0.679002 TTAGTCGTCCGCCTAGCAGT 60.679 55.000 0.00 0.00 0.00 4.40
1419 1454 0.669077 ATTAGTCGTCCGCCTAGCAG 59.331 55.000 0.00 0.00 0.00 4.24
1420 1455 1.108776 AATTAGTCGTCCGCCTAGCA 58.891 50.000 0.00 0.00 0.00 3.49
1421 1456 2.220479 AAATTAGTCGTCCGCCTAGC 57.780 50.000 0.00 0.00 0.00 3.42
1422 1457 4.205792 CGTTTAAATTAGTCGTCCGCCTAG 59.794 45.833 0.00 0.00 0.00 3.02
1423 1458 4.104776 CGTTTAAATTAGTCGTCCGCCTA 58.895 43.478 0.00 0.00 0.00 3.93
1424 1459 2.925563 CGTTTAAATTAGTCGTCCGCCT 59.074 45.455 0.00 0.00 0.00 5.52
1425 1460 2.923020 TCGTTTAAATTAGTCGTCCGCC 59.077 45.455 0.00 0.00 0.00 6.13
1426 1461 3.241773 GGTCGTTTAAATTAGTCGTCCGC 60.242 47.826 0.00 0.00 0.00 5.54
1427 1462 3.919804 TGGTCGTTTAAATTAGTCGTCCG 59.080 43.478 0.00 0.00 33.89 4.79
1428 1463 4.925646 ACTGGTCGTTTAAATTAGTCGTCC 59.074 41.667 0.00 0.00 0.00 4.79
1429 1464 5.667156 GCACTGGTCGTTTAAATTAGTCGTC 60.667 44.000 0.00 0.00 0.00 4.20
1430 1465 4.151157 GCACTGGTCGTTTAAATTAGTCGT 59.849 41.667 0.00 0.00 0.00 4.34
1431 1466 4.150980 TGCACTGGTCGTTTAAATTAGTCG 59.849 41.667 0.00 0.00 0.00 4.18
1432 1467 5.379827 GTGCACTGGTCGTTTAAATTAGTC 58.620 41.667 10.32 0.00 0.00 2.59
1433 1468 4.084223 CGTGCACTGGTCGTTTAAATTAGT 60.084 41.667 16.19 0.00 0.00 2.24
1434 1469 4.150980 TCGTGCACTGGTCGTTTAAATTAG 59.849 41.667 16.19 0.00 0.00 1.73
1435 1470 4.056740 TCGTGCACTGGTCGTTTAAATTA 58.943 39.130 16.19 0.00 0.00 1.40
1436 1471 2.873472 TCGTGCACTGGTCGTTTAAATT 59.127 40.909 16.19 0.00 0.00 1.82
1437 1472 2.222445 GTCGTGCACTGGTCGTTTAAAT 59.778 45.455 16.19 0.00 0.00 1.40
1438 1473 1.593933 GTCGTGCACTGGTCGTTTAAA 59.406 47.619 16.19 0.00 0.00 1.52
1439 1474 1.210870 GTCGTGCACTGGTCGTTTAA 58.789 50.000 16.19 0.00 0.00 1.52
1440 1475 0.935831 CGTCGTGCACTGGTCGTTTA 60.936 55.000 16.19 0.00 0.00 2.01
1441 1476 2.235016 CGTCGTGCACTGGTCGTTT 61.235 57.895 16.19 0.00 0.00 3.60
1442 1477 2.416244 ATCGTCGTGCACTGGTCGTT 62.416 55.000 16.19 6.46 0.00 3.85
1443 1478 2.916052 ATCGTCGTGCACTGGTCGT 61.916 57.895 16.19 3.04 0.00 4.34
1444 1479 2.126463 ATCGTCGTGCACTGGTCG 60.126 61.111 16.19 13.31 0.00 4.79
1445 1480 0.666274 TTCATCGTCGTGCACTGGTC 60.666 55.000 16.19 1.56 0.00 4.02
1446 1481 0.037326 ATTCATCGTCGTGCACTGGT 60.037 50.000 16.19 0.00 0.00 4.00
1447 1482 0.647410 GATTCATCGTCGTGCACTGG 59.353 55.000 16.19 3.75 0.00 4.00
1448 1483 0.647410 GGATTCATCGTCGTGCACTG 59.353 55.000 16.19 8.79 0.00 3.66
1449 1484 0.460284 GGGATTCATCGTCGTGCACT 60.460 55.000 16.19 0.00 0.00 4.40
1450 1485 0.739462 TGGGATTCATCGTCGTGCAC 60.739 55.000 6.82 6.82 0.00 4.57
1451 1486 0.460109 CTGGGATTCATCGTCGTGCA 60.460 55.000 0.00 0.00 0.00 4.57
1452 1487 1.766143 GCTGGGATTCATCGTCGTGC 61.766 60.000 0.00 0.00 0.00 5.34
1453 1488 1.154205 GGCTGGGATTCATCGTCGTG 61.154 60.000 0.00 0.00 0.00 4.35
1454 1489 1.144057 GGCTGGGATTCATCGTCGT 59.856 57.895 0.00 0.00 0.00 4.34
1455 1490 1.143838 TGGCTGGGATTCATCGTCG 59.856 57.895 0.00 0.00 0.00 5.12
1456 1491 0.815615 GGTGGCTGGGATTCATCGTC 60.816 60.000 0.00 0.00 0.00 4.20
1457 1492 1.224592 GGTGGCTGGGATTCATCGT 59.775 57.895 0.00 0.00 0.00 3.73
1458 1493 1.889105 CGGTGGCTGGGATTCATCG 60.889 63.158 0.00 0.00 0.00 3.84
1459 1494 0.107214 TTCGGTGGCTGGGATTCATC 60.107 55.000 0.00 0.00 0.00 2.92
1460 1495 0.331278 TTTCGGTGGCTGGGATTCAT 59.669 50.000 0.00 0.00 0.00 2.57
1461 1496 0.608035 GTTTCGGTGGCTGGGATTCA 60.608 55.000 0.00 0.00 0.00 2.57
1462 1497 0.322546 AGTTTCGGTGGCTGGGATTC 60.323 55.000 0.00 0.00 0.00 2.52
1463 1498 0.322546 GAGTTTCGGTGGCTGGGATT 60.323 55.000 0.00 0.00 0.00 3.01
1464 1499 1.299976 GAGTTTCGGTGGCTGGGAT 59.700 57.895 0.00 0.00 0.00 3.85
1465 1500 2.747686 GAGTTTCGGTGGCTGGGA 59.252 61.111 0.00 0.00 0.00 4.37
1466 1501 2.742372 CGAGTTTCGGTGGCTGGG 60.742 66.667 0.00 0.00 36.00 4.45
1467 1502 2.027625 GACGAGTTTCGGTGGCTGG 61.028 63.158 3.37 0.00 45.59 4.85
1468 1503 2.027625 GGACGAGTTTCGGTGGCTG 61.028 63.158 3.37 0.00 45.59 4.85
1469 1504 2.342648 GGACGAGTTTCGGTGGCT 59.657 61.111 3.37 0.00 45.59 4.75
1470 1505 2.029964 TGGACGAGTTTCGGTGGC 59.970 61.111 3.37 0.00 45.59 5.01
1471 1506 0.944311 CTGTGGACGAGTTTCGGTGG 60.944 60.000 3.37 0.00 45.59 4.61
1472 1507 1.557443 GCTGTGGACGAGTTTCGGTG 61.557 60.000 3.37 0.00 45.59 4.94
1473 1508 1.300697 GCTGTGGACGAGTTTCGGT 60.301 57.895 3.37 0.00 45.59 4.69
1474 1509 2.027625 GGCTGTGGACGAGTTTCGG 61.028 63.158 3.37 0.00 45.59 4.30
1475 1510 2.027625 GGGCTGTGGACGAGTTTCG 61.028 63.158 0.00 0.00 46.93 3.46
1476 1511 1.070786 TGGGCTGTGGACGAGTTTC 59.929 57.895 0.00 0.00 0.00 2.78
1477 1512 1.227853 GTGGGCTGTGGACGAGTTT 60.228 57.895 0.00 0.00 0.00 2.66
1478 1513 2.426023 GTGGGCTGTGGACGAGTT 59.574 61.111 0.00 0.00 0.00 3.01
1479 1514 2.842462 TGTGGGCTGTGGACGAGT 60.842 61.111 0.00 0.00 0.00 4.18
1480 1515 2.357517 GTGTGGGCTGTGGACGAG 60.358 66.667 0.00 0.00 0.00 4.18
1481 1516 2.842462 AGTGTGGGCTGTGGACGA 60.842 61.111 0.00 0.00 0.00 4.20
1482 1517 2.357517 GAGTGTGGGCTGTGGACG 60.358 66.667 0.00 0.00 0.00 4.79
1483 1518 1.302033 CAGAGTGTGGGCTGTGGAC 60.302 63.158 0.00 0.00 0.00 4.02
1484 1519 1.344953 AACAGAGTGTGGGCTGTGGA 61.345 55.000 0.00 0.00 44.06 4.02
1485 1520 0.886490 GAACAGAGTGTGGGCTGTGG 60.886 60.000 0.00 0.00 44.06 4.17
1486 1521 1.224069 CGAACAGAGTGTGGGCTGTG 61.224 60.000 0.00 0.00 44.06 3.66
1487 1522 1.069765 CGAACAGAGTGTGGGCTGT 59.930 57.895 0.00 0.00 46.59 4.40
1488 1523 2.320587 GCGAACAGAGTGTGGGCTG 61.321 63.158 0.00 0.00 38.10 4.85
1489 1524 2.031163 GCGAACAGAGTGTGGGCT 59.969 61.111 0.00 0.00 0.00 5.19
1490 1525 2.031163 AGCGAACAGAGTGTGGGC 59.969 61.111 0.00 0.00 31.88 5.36
1491 1526 1.669115 CCAGCGAACAGAGTGTGGG 60.669 63.158 0.00 0.00 0.00 4.61
1492 1527 0.036952 ATCCAGCGAACAGAGTGTGG 60.037 55.000 0.00 0.00 0.00 4.17
1493 1528 1.800805 AATCCAGCGAACAGAGTGTG 58.199 50.000 0.00 0.00 0.00 3.82
1494 1529 2.550830 AAATCCAGCGAACAGAGTGT 57.449 45.000 0.00 0.00 0.00 3.55
1495 1530 4.393062 ACAATAAATCCAGCGAACAGAGTG 59.607 41.667 0.00 0.00 0.00 3.51
1496 1531 4.579869 ACAATAAATCCAGCGAACAGAGT 58.420 39.130 0.00 0.00 0.00 3.24
1497 1532 4.259970 CGACAATAAATCCAGCGAACAGAG 60.260 45.833 0.00 0.00 0.00 3.35
1498 1533 3.616821 CGACAATAAATCCAGCGAACAGA 59.383 43.478 0.00 0.00 0.00 3.41
1499 1534 3.370978 ACGACAATAAATCCAGCGAACAG 59.629 43.478 0.00 0.00 0.00 3.16
1500 1535 3.331150 ACGACAATAAATCCAGCGAACA 58.669 40.909 0.00 0.00 0.00 3.18
1501 1536 4.142988 TGAACGACAATAAATCCAGCGAAC 60.143 41.667 0.00 0.00 0.00 3.95
1502 1537 3.997681 TGAACGACAATAAATCCAGCGAA 59.002 39.130 0.00 0.00 0.00 4.70
1503 1538 3.591023 TGAACGACAATAAATCCAGCGA 58.409 40.909 0.00 0.00 0.00 4.93
1504 1539 4.274069 CATGAACGACAATAAATCCAGCG 58.726 43.478 0.00 0.00 0.00 5.18
1505 1540 4.335315 TCCATGAACGACAATAAATCCAGC 59.665 41.667 0.00 0.00 0.00 4.85
1506 1541 6.564686 CGATCCATGAACGACAATAAATCCAG 60.565 42.308 0.00 0.00 29.49 3.86
1507 1542 5.236263 CGATCCATGAACGACAATAAATCCA 59.764 40.000 0.00 0.00 29.49 3.41
1508 1543 5.334105 CCGATCCATGAACGACAATAAATCC 60.334 44.000 0.00 0.00 29.49 3.01
1509 1544 5.679906 CCGATCCATGAACGACAATAAATC 58.320 41.667 0.00 0.00 29.49 2.17
1510 1545 4.024048 GCCGATCCATGAACGACAATAAAT 60.024 41.667 0.00 0.00 29.49 1.40
1511 1546 3.311322 GCCGATCCATGAACGACAATAAA 59.689 43.478 0.00 0.00 29.49 1.40
1512 1547 2.869801 GCCGATCCATGAACGACAATAA 59.130 45.455 0.00 0.00 29.49 1.40
1513 1548 2.479837 GCCGATCCATGAACGACAATA 58.520 47.619 0.00 0.00 29.49 1.90
1514 1549 1.299541 GCCGATCCATGAACGACAAT 58.700 50.000 0.00 0.00 29.49 2.71
1515 1550 0.742990 GGCCGATCCATGAACGACAA 60.743 55.000 0.00 0.00 29.49 3.18
1516 1551 1.153449 GGCCGATCCATGAACGACA 60.153 57.895 0.00 0.00 29.49 4.35
1517 1552 1.153449 TGGCCGATCCATGAACGAC 60.153 57.895 0.00 0.00 40.72 4.34
1518 1553 3.304251 TGGCCGATCCATGAACGA 58.696 55.556 0.00 0.00 40.72 3.85
1525 1560 0.179048 GACATCATGTGGCCGATCCA 60.179 55.000 0.00 0.00 44.18 3.41
1526 1561 1.224069 CGACATCATGTGGCCGATCC 61.224 60.000 0.00 0.00 29.16 3.36
1527 1562 0.530650 ACGACATCATGTGGCCGATC 60.531 55.000 0.00 0.00 33.92 3.69
1528 1563 0.811219 CACGACATCATGTGGCCGAT 60.811 55.000 0.00 0.00 33.92 4.18
1529 1564 1.447663 CACGACATCATGTGGCCGA 60.448 57.895 0.00 0.00 33.92 5.54
1530 1565 1.741401 ACACGACATCATGTGGCCG 60.741 57.895 0.00 0.00 40.39 6.13
1531 1566 1.796151 CACACGACATCATGTGGCC 59.204 57.895 0.00 0.00 42.08 5.36
1535 1570 1.941209 GCTCCACACACGACATCATGT 60.941 52.381 0.00 0.00 0.00 3.21
1536 1571 0.723414 GCTCCACACACGACATCATG 59.277 55.000 0.00 0.00 0.00 3.07
1537 1572 0.321346 TGCTCCACACACGACATCAT 59.679 50.000 0.00 0.00 0.00 2.45
1538 1573 0.105778 TTGCTCCACACACGACATCA 59.894 50.000 0.00 0.00 0.00 3.07
1539 1574 1.442769 ATTGCTCCACACACGACATC 58.557 50.000 0.00 0.00 0.00 3.06
1540 1575 1.806542 GAATTGCTCCACACACGACAT 59.193 47.619 0.00 0.00 0.00 3.06
1541 1576 1.225855 GAATTGCTCCACACACGACA 58.774 50.000 0.00 0.00 0.00 4.35
1542 1577 0.517316 GGAATTGCTCCACACACGAC 59.483 55.000 0.00 0.00 44.67 4.34
1543 1578 0.948623 CGGAATTGCTCCACACACGA 60.949 55.000 0.00 0.00 45.74 4.35
1544 1579 1.227999 ACGGAATTGCTCCACACACG 61.228 55.000 0.00 0.00 45.74 4.49
1545 1580 0.951558 AACGGAATTGCTCCACACAC 59.048 50.000 0.00 0.00 45.74 3.82
1546 1581 1.234821 GAACGGAATTGCTCCACACA 58.765 50.000 0.00 0.00 45.74 3.72
1547 1582 0.521735 GGAACGGAATTGCTCCACAC 59.478 55.000 0.95 0.00 45.74 3.82
1548 1583 2.941210 GGAACGGAATTGCTCCACA 58.059 52.632 0.95 0.00 45.74 4.17
1576 1611 4.555313 CGCCATTGATATTAGCAACCACTG 60.555 45.833 0.00 0.00 0.00 3.66
1713 1748 5.548406 GTGGGCCATACGATAAGTAAGATT 58.452 41.667 10.70 0.00 39.04 2.40
1726 1761 3.110139 CACATGCGTGGGCCATAC 58.890 61.111 10.70 5.52 39.64 2.39
1778 1813 2.202623 GGTAGCACCGCTGAGACG 60.203 66.667 0.00 0.00 40.10 4.18
1784 1819 1.079127 GTCACATGGTAGCACCGCT 60.079 57.895 0.00 0.00 42.58 5.52
1812 1847 1.557099 AAGACGCTATGGTGACCAGA 58.443 50.000 11.23 4.15 36.75 3.86
1844 1879 3.844211 TGCCAGGAAGATACCAGTAAAGT 59.156 43.478 0.00 0.00 0.00 2.66
1903 1938 6.265196 TGCAACAGGAAGTTTCTTAATCACAT 59.735 34.615 0.00 0.00 38.74 3.21
1911 1946 3.442273 TCGTTTGCAACAGGAAGTTTCTT 59.558 39.130 0.00 0.00 38.74 2.52
1912 1947 3.013921 TCGTTTGCAACAGGAAGTTTCT 58.986 40.909 0.00 0.00 38.74 2.52
1931 1966 2.469826 TGGCTTGTATCGTAGCAATCG 58.530 47.619 0.00 0.00 39.15 3.34
2045 2080 5.305386 CCATCTAGTTCCACCATGACATCTA 59.695 44.000 0.00 0.00 0.00 1.98
2047 2082 4.384056 CCATCTAGTTCCACCATGACATC 58.616 47.826 0.00 0.00 0.00 3.06
2048 2083 3.434167 GCCATCTAGTTCCACCATGACAT 60.434 47.826 0.00 0.00 0.00 3.06
2070 2105 3.067461 AGACTAATAGACTTCTGCGGCAG 59.933 47.826 23.72 23.72 0.00 4.85
2077 2112 6.042322 TCCTAGCTCGAGACTAATAGACTTCT 59.958 42.308 18.75 0.87 0.00 2.85
2082 2117 7.276658 CCATATCCTAGCTCGAGACTAATAGA 58.723 42.308 18.75 13.08 0.00 1.98
2093 2128 1.821753 CCACTCCCATATCCTAGCTCG 59.178 57.143 0.00 0.00 0.00 5.03
2104 2139 5.399991 TCGTCCTTATAATACCACTCCCAT 58.600 41.667 0.00 0.00 0.00 4.00
2116 2151 9.268268 CCAATATAGCTTGTTTCGTCCTTATAA 57.732 33.333 0.00 0.00 0.00 0.98
2117 2152 7.876068 CCCAATATAGCTTGTTTCGTCCTTATA 59.124 37.037 0.00 0.00 0.00 0.98
2125 2160 5.124776 TCAAACCCCAATATAGCTTGTTTCG 59.875 40.000 0.00 0.00 0.00 3.46
2129 2164 3.945285 CGTCAAACCCCAATATAGCTTGT 59.055 43.478 0.00 0.00 0.00 3.16
2139 2174 1.070105 CGTCCTCGTCAAACCCCAA 59.930 57.895 0.00 0.00 0.00 4.12
2146 2181 0.601057 TGCATTCTCGTCCTCGTCAA 59.399 50.000 0.00 0.00 38.33 3.18
2158 2193 4.394300 CCACTCGAAAGAAGATTGCATTCT 59.606 41.667 5.28 5.28 41.32 2.40
2160 2195 3.441572 CCCACTCGAAAGAAGATTGCATT 59.558 43.478 0.00 0.00 41.32 3.56
2163 2198 1.131315 GCCCACTCGAAAGAAGATTGC 59.869 52.381 0.00 0.00 41.32 3.56
2164 2199 2.417933 CTGCCCACTCGAAAGAAGATTG 59.582 50.000 0.00 0.00 41.32 2.67
2183 2218 5.236282 AGATGGACGATGAAGATATTGCTG 58.764 41.667 0.00 0.00 0.00 4.41
2198 2233 5.235186 GGACTTCATTGATACAAGATGGACG 59.765 44.000 0.00 0.00 0.00 4.79
2202 2237 7.854557 TCTTGGACTTCATTGATACAAGATG 57.145 36.000 9.82 0.00 38.22 2.90
2204 2239 7.939039 AGTTTCTTGGACTTCATTGATACAAGA 59.061 33.333 9.82 9.82 40.48 3.02
2224 2259 8.135382 TGTAGTATAGCTTCTCCAAAGTTTCT 57.865 34.615 0.00 0.00 0.00 2.52
2225 2260 8.821894 CATGTAGTATAGCTTCTCCAAAGTTTC 58.178 37.037 0.00 0.00 0.00 2.78
2244 2279 7.171508 CGTGTAAGGATGATATTTGCATGTAGT 59.828 37.037 0.00 0.00 0.00 2.73
2250 2285 5.182487 ACACGTGTAAGGATGATATTTGCA 58.818 37.500 21.98 0.00 0.00 4.08
2338 2455 1.592669 CCCGCAGCAACGATCTAGG 60.593 63.158 0.00 0.00 34.06 3.02
2345 2462 0.033504 ATAGGTATCCCGCAGCAACG 59.966 55.000 0.00 0.00 35.12 4.10
2351 2468 4.497291 AGAACAAAATAGGTATCCCGCA 57.503 40.909 0.00 0.00 35.12 5.69
2363 2480 6.696411 TGGTGAACACTTCAAAGAACAAAAT 58.304 32.000 4.96 0.00 42.15 1.82
2413 2530 2.044758 CCTACGCCCAGGTATAAAGGT 58.955 52.381 0.00 0.00 0.00 3.50
2414 2531 2.322658 TCCTACGCCCAGGTATAAAGG 58.677 52.381 0.00 0.00 36.99 3.11
2418 2535 4.938028 TGATATTCCTACGCCCAGGTATA 58.062 43.478 0.00 0.18 36.99 1.47
2419 2536 3.786553 TGATATTCCTACGCCCAGGTAT 58.213 45.455 0.00 0.00 36.99 2.73
2423 2540 3.118738 GGGTATGATATTCCTACGCCCAG 60.119 52.174 0.00 0.00 34.03 4.45
2427 2544 4.530710 TGTGGGTATGATATTCCTACGC 57.469 45.455 0.00 0.00 34.61 4.42
2428 2545 6.280855 TGATGTGGGTATGATATTCCTACG 57.719 41.667 0.00 0.00 34.61 3.51
2443 2560 9.927668 AATGTAAGACTTTTAAAATGATGTGGG 57.072 29.630 0.09 0.00 0.00 4.61
2509 2626 5.601583 TTGATAATGCATGTTGATGGCTT 57.398 34.783 0.00 0.00 0.00 4.35
2510 2627 5.801531 ATTGATAATGCATGTTGATGGCT 57.198 34.783 0.00 0.00 0.00 4.75
2544 2661 9.777008 AGGTAAAGGGATTTTCATAAATGGTTA 57.223 29.630 0.00 0.00 34.16 2.85
2583 2700 6.817765 TCCATGAAAATTACCTGTGACTTC 57.182 37.500 0.00 0.00 0.00 3.01
2617 2734 9.243105 ACATCCCGGAATTCTAAAATATTATGG 57.757 33.333 0.73 0.00 0.00 2.74
2623 2740 7.722285 CCCTTTACATCCCGGAATTCTAAAATA 59.278 37.037 0.73 0.00 0.00 1.40
2626 2743 5.192121 TCCCTTTACATCCCGGAATTCTAAA 59.808 40.000 0.73 0.17 0.00 1.85
2634 2751 1.659022 TGTTCCCTTTACATCCCGGA 58.341 50.000 0.73 0.00 0.00 5.14
2638 2755 9.403583 TGAAGTAATTATGTTCCCTTTACATCC 57.596 33.333 7.65 0.00 37.42 3.51
2763 2881 6.823689 ACCTTATCGTAAAACATCATGAAGCT 59.176 34.615 0.00 0.00 0.00 3.74
2764 2882 7.016361 ACCTTATCGTAAAACATCATGAAGC 57.984 36.000 0.00 0.00 0.00 3.86
2765 2883 9.916397 GTTACCTTATCGTAAAACATCATGAAG 57.084 33.333 0.00 0.00 30.25 3.02
2766 2884 9.438228 TGTTACCTTATCGTAAAACATCATGAA 57.562 29.630 0.00 0.00 30.25 2.57
2780 2898 9.751542 ATGAAGAAGAATACTGTTACCTTATCG 57.248 33.333 0.00 0.00 0.00 2.92
2791 2909 9.029243 GTGATGTCTACATGAAGAAGAATACTG 57.971 37.037 0.00 0.00 36.57 2.74
2792 2910 8.200792 GGTGATGTCTACATGAAGAAGAATACT 58.799 37.037 0.00 0.00 36.57 2.12
2793 2911 7.168302 CGGTGATGTCTACATGAAGAAGAATAC 59.832 40.741 0.00 0.00 36.57 1.89
2802 2920 2.760650 AGCTCGGTGATGTCTACATGAA 59.239 45.455 0.00 0.00 36.57 2.57
2803 2921 2.099756 CAGCTCGGTGATGTCTACATGA 59.900 50.000 0.00 0.00 36.57 3.07
2804 2922 2.099756 TCAGCTCGGTGATGTCTACATG 59.900 50.000 0.00 0.00 36.57 3.21
2814 2932 1.879380 CCACAAATTTCAGCTCGGTGA 59.121 47.619 4.60 0.00 0.00 4.02
2818 2936 3.070018 ACTCTCCACAAATTTCAGCTCG 58.930 45.455 0.00 0.00 0.00 5.03
2819 2937 5.934625 TCTTACTCTCCACAAATTTCAGCTC 59.065 40.000 0.00 0.00 0.00 4.09
2848 2972 4.431809 CTCAGAGGTCTGCAATCTTACTG 58.568 47.826 1.81 0.00 43.46 2.74
2851 2975 2.159184 CGCTCAGAGGTCTGCAATCTTA 60.159 50.000 1.81 0.00 43.46 2.10
2857 2981 0.966179 TAAACGCTCAGAGGTCTGCA 59.034 50.000 1.81 0.00 43.46 4.41
2862 2986 3.746045 TTCAACTAAACGCTCAGAGGT 57.254 42.857 0.00 0.00 0.00 3.85
2866 2990 6.145534 TGTCTGTAATTCAACTAAACGCTCAG 59.854 38.462 0.00 0.00 0.00 3.35
2869 2993 6.220930 TCTGTCTGTAATTCAACTAAACGCT 58.779 36.000 0.00 0.00 0.00 5.07
2870 2994 6.462073 TCTGTCTGTAATTCAACTAAACGC 57.538 37.500 0.00 0.00 0.00 4.84
2876 3000 8.798859 ATGCTAATTCTGTCTGTAATTCAACT 57.201 30.769 0.00 0.00 0.00 3.16
2881 3005 9.236006 ACTTGAATGCTAATTCTGTCTGTAATT 57.764 29.630 0.63 0.00 42.40 1.40
2890 3014 8.261492 AGTCAACTACTTGAATGCTAATTCTG 57.739 34.615 0.63 0.00 42.40 3.02
2906 3031 6.051179 AGTAGGAATGGGAAAGTCAACTAC 57.949 41.667 0.00 0.00 0.00 2.73
2907 3032 6.697641 AAGTAGGAATGGGAAAGTCAACTA 57.302 37.500 0.00 0.00 0.00 2.24
2913 3038 5.430089 AGAGCATAAGTAGGAATGGGAAAGT 59.570 40.000 0.00 0.00 0.00 2.66
2914 3039 5.934781 AGAGCATAAGTAGGAATGGGAAAG 58.065 41.667 0.00 0.00 0.00 2.62
2920 3045 9.941325 AATTGATAGAGAGCATAAGTAGGAATG 57.059 33.333 0.00 0.00 0.00 2.67
2921 3046 9.941325 CAATTGATAGAGAGCATAAGTAGGAAT 57.059 33.333 0.00 0.00 0.00 3.01
2936 3061 9.897744 TTTTTAAGCAGTGAACAATTGATAGAG 57.102 29.630 13.59 0.00 0.00 2.43
3012 3137 2.733593 GTCTCCACCGTGTGTCGC 60.734 66.667 0.00 0.00 38.35 5.19
3013 3138 2.049433 GGTCTCCACCGTGTGTCG 60.049 66.667 0.00 0.00 39.52 4.35
3033 3158 4.460731 GCTTCCTCCTTGAGCAGTATTTTT 59.539 41.667 0.00 0.00 36.45 1.94
3062 3187 2.096013 GGAGCTGAACGTTGCCTAAATC 59.904 50.000 5.00 0.00 0.00 2.17
3068 3193 1.004440 AGAGGAGCTGAACGTTGCC 60.004 57.895 5.00 0.00 0.00 4.52
3069 3194 1.016653 GGAGAGGAGCTGAACGTTGC 61.017 60.000 5.00 3.52 0.00 4.17
3070 3195 0.734253 CGGAGAGGAGCTGAACGTTG 60.734 60.000 5.00 0.00 0.00 4.10
3071 3196 1.587054 CGGAGAGGAGCTGAACGTT 59.413 57.895 0.00 0.00 0.00 3.99
3072 3197 2.995872 GCGGAGAGGAGCTGAACGT 61.996 63.158 0.00 0.00 0.00 3.99
3073 3198 2.202676 GCGGAGAGGAGCTGAACG 60.203 66.667 0.00 0.00 0.00 3.95
3074 3199 1.140804 GAGCGGAGAGGAGCTGAAC 59.859 63.158 0.00 0.00 44.69 3.18
3075 3200 2.055042 GGAGCGGAGAGGAGCTGAA 61.055 63.158 0.00 0.00 44.69 3.02
3076 3201 2.441164 GGAGCGGAGAGGAGCTGA 60.441 66.667 0.00 0.00 44.69 4.26
3077 3202 3.535962 GGGAGCGGAGAGGAGCTG 61.536 72.222 0.00 0.00 44.69 4.24
3079 3204 3.223589 GAGGGAGCGGAGAGGAGC 61.224 72.222 0.00 0.00 0.00 4.70
3080 3205 2.520741 GGAGGGAGCGGAGAGGAG 60.521 72.222 0.00 0.00 0.00 3.69
3081 3206 3.347590 TGGAGGGAGCGGAGAGGA 61.348 66.667 0.00 0.00 0.00 3.71
3082 3207 3.151022 GTGGAGGGAGCGGAGAGG 61.151 72.222 0.00 0.00 0.00 3.69
3083 3208 2.043450 AGTGGAGGGAGCGGAGAG 60.043 66.667 0.00 0.00 0.00 3.20
3084 3209 2.043852 GAGTGGAGGGAGCGGAGA 60.044 66.667 0.00 0.00 0.00 3.71
3085 3210 3.151022 GGAGTGGAGGGAGCGGAG 61.151 72.222 0.00 0.00 0.00 4.63
3089 3214 3.844090 GAGCGGAGTGGAGGGAGC 61.844 72.222 0.00 0.00 0.00 4.70
3090 3215 3.151022 GGAGCGGAGTGGAGGGAG 61.151 72.222 0.00 0.00 0.00 4.30
3093 3218 3.068691 TTCGGAGCGGAGTGGAGG 61.069 66.667 0.00 0.00 0.00 4.30
3094 3219 2.492090 CTTCGGAGCGGAGTGGAG 59.508 66.667 0.00 0.00 0.00 3.86
3095 3220 3.760035 GCTTCGGAGCGGAGTGGA 61.760 66.667 0.00 0.00 39.48 4.02
3107 3232 0.312416 CTAGATCCTGGTCCGCTTCG 59.688 60.000 0.00 0.00 0.00 3.79
3108 3233 0.032815 GCTAGATCCTGGTCCGCTTC 59.967 60.000 0.00 0.00 0.00 3.86
3109 3234 0.397816 AGCTAGATCCTGGTCCGCTT 60.398 55.000 0.00 0.00 0.00 4.68
3110 3235 0.825840 GAGCTAGATCCTGGTCCGCT 60.826 60.000 0.00 2.54 0.00 5.52
3111 3236 1.109920 TGAGCTAGATCCTGGTCCGC 61.110 60.000 5.36 0.00 0.00 5.54
3112 3237 1.626686 ATGAGCTAGATCCTGGTCCG 58.373 55.000 5.36 0.00 0.00 4.79
3113 3238 4.141620 TGAAAATGAGCTAGATCCTGGTCC 60.142 45.833 5.36 0.00 0.00 4.46
3114 3239 4.813697 GTGAAAATGAGCTAGATCCTGGTC 59.186 45.833 5.36 7.54 0.00 4.02
3115 3240 4.681781 CGTGAAAATGAGCTAGATCCTGGT 60.682 45.833 5.36 0.00 0.00 4.00
3116 3241 3.806521 CGTGAAAATGAGCTAGATCCTGG 59.193 47.826 5.36 0.00 0.00 4.45
3117 3242 3.806521 CCGTGAAAATGAGCTAGATCCTG 59.193 47.826 5.36 0.00 0.00 3.86
3118 3243 3.706594 TCCGTGAAAATGAGCTAGATCCT 59.293 43.478 5.36 0.00 0.00 3.24
3119 3244 4.054671 CTCCGTGAAAATGAGCTAGATCC 58.945 47.826 5.36 0.00 0.00 3.36
3120 3245 4.938080 TCTCCGTGAAAATGAGCTAGATC 58.062 43.478 0.00 0.00 0.00 2.75
3121 3246 4.202202 CCTCTCCGTGAAAATGAGCTAGAT 60.202 45.833 0.00 0.00 0.00 1.98
3122 3247 3.131223 CCTCTCCGTGAAAATGAGCTAGA 59.869 47.826 0.00 0.00 0.00 2.43
3123 3248 3.452474 CCTCTCCGTGAAAATGAGCTAG 58.548 50.000 0.00 0.00 0.00 3.42
3124 3249 2.418746 GCCTCTCCGTGAAAATGAGCTA 60.419 50.000 0.00 0.00 0.00 3.32
3125 3250 1.677217 GCCTCTCCGTGAAAATGAGCT 60.677 52.381 0.00 0.00 0.00 4.09
3126 3251 0.729690 GCCTCTCCGTGAAAATGAGC 59.270 55.000 0.00 0.00 0.00 4.26
3127 3252 2.393271 AGCCTCTCCGTGAAAATGAG 57.607 50.000 0.00 0.00 0.00 2.90
3128 3253 3.973206 TTAGCCTCTCCGTGAAAATGA 57.027 42.857 0.00 0.00 0.00 2.57
3129 3254 5.567138 ATTTTAGCCTCTCCGTGAAAATG 57.433 39.130 0.00 0.00 0.00 2.32
3130 3255 7.628580 GCTTAATTTTAGCCTCTCCGTGAAAAT 60.629 37.037 0.00 0.00 32.45 1.82
3131 3256 6.349033 GCTTAATTTTAGCCTCTCCGTGAAAA 60.349 38.462 0.00 0.00 32.45 2.29
3132 3257 5.123344 GCTTAATTTTAGCCTCTCCGTGAAA 59.877 40.000 0.00 0.00 32.45 2.69
3133 3258 4.634443 GCTTAATTTTAGCCTCTCCGTGAA 59.366 41.667 0.00 0.00 32.45 3.18
3134 3259 4.081087 AGCTTAATTTTAGCCTCTCCGTGA 60.081 41.667 3.89 0.00 39.47 4.35
3135 3260 4.192317 AGCTTAATTTTAGCCTCTCCGTG 58.808 43.478 3.89 0.00 39.47 4.94
3136 3261 4.443621 GAGCTTAATTTTAGCCTCTCCGT 58.556 43.478 3.89 0.00 39.47 4.69
3137 3262 3.810386 GGAGCTTAATTTTAGCCTCTCCG 59.190 47.826 3.89 0.00 39.47 4.63
3138 3263 4.576873 GTGGAGCTTAATTTTAGCCTCTCC 59.423 45.833 3.89 5.70 39.47 3.71
3139 3264 5.186198 TGTGGAGCTTAATTTTAGCCTCTC 58.814 41.667 3.89 0.00 39.47 3.20
3140 3265 5.179452 TGTGGAGCTTAATTTTAGCCTCT 57.821 39.130 3.89 0.00 39.47 3.69
3141 3266 5.416013 AGTTGTGGAGCTTAATTTTAGCCTC 59.584 40.000 3.89 2.18 39.47 4.70
3142 3267 5.325239 AGTTGTGGAGCTTAATTTTAGCCT 58.675 37.500 3.89 0.00 39.47 4.58
3143 3268 5.393135 GGAGTTGTGGAGCTTAATTTTAGCC 60.393 44.000 3.89 0.00 39.47 3.93
3144 3269 5.641709 GGAGTTGTGGAGCTTAATTTTAGC 58.358 41.667 0.00 0.00 38.93 3.09
3145 3270 5.673818 GCGGAGTTGTGGAGCTTAATTTTAG 60.674 44.000 0.00 0.00 0.00 1.85
3146 3271 4.155280 GCGGAGTTGTGGAGCTTAATTTTA 59.845 41.667 0.00 0.00 0.00 1.52
3147 3272 3.057526 GCGGAGTTGTGGAGCTTAATTTT 60.058 43.478 0.00 0.00 0.00 1.82
3148 3273 2.488153 GCGGAGTTGTGGAGCTTAATTT 59.512 45.455 0.00 0.00 0.00 1.82
3149 3274 2.084546 GCGGAGTTGTGGAGCTTAATT 58.915 47.619 0.00 0.00 0.00 1.40
3150 3275 1.739067 GCGGAGTTGTGGAGCTTAAT 58.261 50.000 0.00 0.00 0.00 1.40
3151 3276 0.669318 CGCGGAGTTGTGGAGCTTAA 60.669 55.000 0.00 0.00 0.00 1.85
3152 3277 1.080093 CGCGGAGTTGTGGAGCTTA 60.080 57.895 0.00 0.00 0.00 3.09
3153 3278 2.357517 CGCGGAGTTGTGGAGCTT 60.358 61.111 0.00 0.00 0.00 3.74
3154 3279 4.379243 CCGCGGAGTTGTGGAGCT 62.379 66.667 24.07 0.00 42.25 4.09
3155 3280 4.373116 TCCGCGGAGTTGTGGAGC 62.373 66.667 27.28 0.00 43.39 4.70
3164 3289 2.024871 CGCTCTAACTCCGCGGAG 59.975 66.667 45.26 45.26 46.91 4.63
3167 3292 2.024871 CTCCGCTCTAACTCCGCG 59.975 66.667 0.00 0.00 45.86 6.46
3168 3293 1.357334 CTCTCCGCTCTAACTCCGC 59.643 63.158 0.00 0.00 0.00 5.54
3169 3294 0.464013 TCCTCTCCGCTCTAACTCCG 60.464 60.000 0.00 0.00 0.00 4.63
3170 3295 1.314730 CTCCTCTCCGCTCTAACTCC 58.685 60.000 0.00 0.00 0.00 3.85
3171 3296 1.314730 CCTCCTCTCCGCTCTAACTC 58.685 60.000 0.00 0.00 0.00 3.01
3172 3297 0.106419 CCCTCCTCTCCGCTCTAACT 60.106 60.000 0.00 0.00 0.00 2.24
3173 3298 0.106619 TCCCTCCTCTCCGCTCTAAC 60.107 60.000 0.00 0.00 0.00 2.34
3174 3299 0.854218 ATCCCTCCTCTCCGCTCTAA 59.146 55.000 0.00 0.00 0.00 2.10
3175 3300 0.854218 AATCCCTCCTCTCCGCTCTA 59.146 55.000 0.00 0.00 0.00 2.43
3176 3301 0.469144 GAATCCCTCCTCTCCGCTCT 60.469 60.000 0.00 0.00 0.00 4.09
3177 3302 1.468506 GGAATCCCTCCTCTCCGCTC 61.469 65.000 0.00 0.00 41.61 5.03
3178 3303 1.458588 GGAATCCCTCCTCTCCGCT 60.459 63.158 0.00 0.00 41.61 5.52
3179 3304 2.862223 CGGAATCCCTCCTCTCCGC 61.862 68.421 0.00 0.00 43.83 5.54
3180 3305 3.449349 CGGAATCCCTCCTCTCCG 58.551 66.667 0.00 0.00 44.31 4.63
3181 3306 0.753867 GTTCGGAATCCCTCCTCTCC 59.246 60.000 0.00 0.00 42.85 3.71
3182 3307 1.486211 TGTTCGGAATCCCTCCTCTC 58.514 55.000 0.00 0.00 42.85 3.20
3183 3308 1.834263 CTTGTTCGGAATCCCTCCTCT 59.166 52.381 0.00 0.00 42.85 3.69
3184 3309 1.134371 CCTTGTTCGGAATCCCTCCTC 60.134 57.143 0.00 0.00 42.85 3.71
3185 3310 0.912486 CCTTGTTCGGAATCCCTCCT 59.088 55.000 0.00 0.00 42.85 3.69
3186 3311 0.748367 GCCTTGTTCGGAATCCCTCC 60.748 60.000 0.00 0.00 41.40 4.30
3187 3312 0.748367 GGCCTTGTTCGGAATCCCTC 60.748 60.000 0.00 0.00 0.00 4.30
3188 3313 1.208165 AGGCCTTGTTCGGAATCCCT 61.208 55.000 0.00 0.00 0.00 4.20
3189 3314 0.323451 AAGGCCTTGTTCGGAATCCC 60.323 55.000 19.73 0.00 0.00 3.85
3190 3315 2.413310 TAAGGCCTTGTTCGGAATCC 57.587 50.000 28.77 0.00 0.00 3.01
3191 3316 6.445357 TTTATTAAGGCCTTGTTCGGAATC 57.555 37.500 28.77 0.00 0.00 2.52
3192 3317 5.163550 GCTTTATTAAGGCCTTGTTCGGAAT 60.164 40.000 28.77 19.42 31.76 3.01
3193 3318 4.157105 GCTTTATTAAGGCCTTGTTCGGAA 59.843 41.667 28.77 13.43 31.76 4.30
3194 3319 3.692593 GCTTTATTAAGGCCTTGTTCGGA 59.307 43.478 28.77 3.34 31.76 4.55
3195 3320 3.486875 CGCTTTATTAAGGCCTTGTTCGG 60.487 47.826 28.77 13.85 31.76 4.30
3196 3321 3.486875 CCGCTTTATTAAGGCCTTGTTCG 60.487 47.826 28.77 18.53 31.76 3.95
3197 3322 3.181490 CCCGCTTTATTAAGGCCTTGTTC 60.181 47.826 28.77 8.65 31.76 3.18
3198 3323 2.758423 CCCGCTTTATTAAGGCCTTGTT 59.242 45.455 28.77 16.87 31.76 2.83
3199 3324 2.291346 ACCCGCTTTATTAAGGCCTTGT 60.291 45.455 28.77 18.23 31.76 3.16
3200 3325 2.099098 CACCCGCTTTATTAAGGCCTTG 59.901 50.000 28.77 11.13 31.76 3.61
3201 3326 2.375146 CACCCGCTTTATTAAGGCCTT 58.625 47.619 24.18 24.18 31.76 4.35
3202 3327 1.409661 CCACCCGCTTTATTAAGGCCT 60.410 52.381 0.00 0.00 31.76 5.19
3203 3328 1.029681 CCACCCGCTTTATTAAGGCC 58.970 55.000 0.00 0.00 31.76 5.19
3204 3329 0.384309 GCCACCCGCTTTATTAAGGC 59.616 55.000 0.64 0.64 31.76 4.35
3205 3330 1.404035 GTGCCACCCGCTTTATTAAGG 59.596 52.381 0.00 0.00 38.78 2.69
3206 3331 2.097466 CAGTGCCACCCGCTTTATTAAG 59.903 50.000 0.00 0.00 38.78 1.85
3207 3332 2.088423 CAGTGCCACCCGCTTTATTAA 58.912 47.619 0.00 0.00 38.78 1.40
3208 3333 1.745232 CAGTGCCACCCGCTTTATTA 58.255 50.000 0.00 0.00 38.78 0.98
3209 3334 1.595093 GCAGTGCCACCCGCTTTATT 61.595 55.000 2.85 0.00 38.78 1.40
3210 3335 2.046285 GCAGTGCCACCCGCTTTAT 61.046 57.895 2.85 0.00 38.78 1.40
3211 3336 2.671619 GCAGTGCCACCCGCTTTA 60.672 61.111 2.85 0.00 38.78 1.85
3225 3350 6.763135 AGTTCAATGTATATACACACAGGCAG 59.237 38.462 17.69 2.86 39.30 4.85
3295 3420 6.881602 CAGCCTTTAGAGTAATCAACCTTTCT 59.118 38.462 0.00 0.00 0.00 2.52
3296 3421 6.879458 TCAGCCTTTAGAGTAATCAACCTTTC 59.121 38.462 0.00 0.00 0.00 2.62
3297 3422 6.779860 TCAGCCTTTAGAGTAATCAACCTTT 58.220 36.000 0.00 0.00 0.00 3.11


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.