Multiple sequence alignment - TraesCS7B01G389400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G389400 chr7B 100.000 2703 0 0 1 2703 656276322 656273620 0.000000e+00 4992.0
1 TraesCS7B01G389400 chr7B 97.876 1177 19 2 1446 2616 656240866 656239690 0.000000e+00 2030.0
2 TraesCS7B01G389400 chr7B 96.792 530 16 1 918 1447 656245676 656245148 0.000000e+00 883.0
3 TraesCS7B01G389400 chr7B 89.956 458 39 3 826 1279 656287943 656287489 3.880000e-163 584.0
4 TraesCS7B01G389400 chr7B 98.592 71 1 0 2633 2703 656239702 656239632 2.830000e-25 126.0
5 TraesCS7B01G389400 chr7A 92.282 1814 79 21 830 2616 682182046 682183825 0.000000e+00 2518.0
6 TraesCS7B01G389400 chr7A 93.281 1667 90 10 1 1653 682178086 682179744 0.000000e+00 2438.0
7 TraesCS7B01G389400 chr7A 92.518 1390 63 19 744 2126 676306661 676305306 0.000000e+00 1953.0
8 TraesCS7B01G389400 chr7A 91.667 636 36 7 1998 2616 676305021 676304386 0.000000e+00 865.0
9 TraesCS7B01G389400 chr7A 91.707 627 36 6 1050 1666 676308492 676307872 0.000000e+00 856.0
10 TraesCS7B01G389400 chr7A 86.864 609 70 8 681 1280 676359356 676359963 0.000000e+00 673.0
11 TraesCS7B01G389400 chr7A 91.957 460 32 3 286 742 676347112 676346655 8.160000e-180 640.0
12 TraesCS7B01G389400 chr7A 85.284 598 61 19 2042 2616 677280374 677279781 2.320000e-165 592.0
13 TraesCS7B01G389400 chr7A 95.050 303 12 3 1 302 676363918 676364218 8.760000e-130 473.0
14 TraesCS7B01G389400 chr7A 83.554 529 49 19 1270 1770 682175742 682176260 6.820000e-126 460.0
15 TraesCS7B01G389400 chr7A 83.051 531 52 18 1270 1770 676360547 676361069 5.310000e-122 448.0
16 TraesCS7B01G389400 chr7A 92.958 71 3 1 2633 2703 676304398 676304330 4.760000e-18 102.0
17 TraesCS7B01G389400 chr7D 94.670 1182 47 8 746 1918 585657540 585656366 0.000000e+00 1820.0
18 TraesCS7B01G389400 chr7D 96.113 746 22 4 1 742 585663285 585662543 0.000000e+00 1210.0
19 TraesCS7B01G389400 chr7D 89.649 570 54 2 719 1283 585668180 585667611 0.000000e+00 721.0
20 TraesCS7B01G389400 chr7D 90.782 499 22 14 1911 2390 585656283 585655790 0.000000e+00 645.0
21 TraesCS7B01G389400 chr7D 84.100 522 52 16 1270 1770 585666985 585666474 2.440000e-130 475.0
22 TraesCS7B01G389400 chr7D 89.888 89 1 1 2536 2616 585655507 585655419 1.020000e-19 108.0
23 TraesCS7B01G389400 chr7D 95.312 64 1 1 2633 2696 585655431 585655370 1.710000e-17 100.0
24 TraesCS7B01G389400 chr7D 100.000 33 0 0 293 325 633507103 633507071 8.080000e-06 62.1
25 TraesCS7B01G389400 chr3D 90.969 454 38 2 2165 2616 55265173 55264721 2.300000e-170 608.0
26 TraesCS7B01G389400 chr3D 80.882 272 31 12 220 488 538338490 538338743 7.640000e-46 195.0
27 TraesCS7B01G389400 chr5D 86.842 114 13 2 206 318 276289719 276289607 2.830000e-25 126.0
28 TraesCS7B01G389400 chr2A 86.087 115 12 4 206 318 174230504 174230392 1.310000e-23 121.0
29 TraesCS7B01G389400 chr2A 88.119 101 11 1 206 305 174108946 174108846 4.730000e-23 119.0
30 TraesCS7B01G389400 chr2A 84.821 112 16 1 208 318 174030364 174030253 7.910000e-21 111.0
31 TraesCS7B01G389400 chr2A 91.111 45 2 2 45 88 31400316 31400273 2.910000e-05 60.2
32 TraesCS7B01G389400 chr2D 84.034 119 12 6 206 319 585743366 585743482 1.020000e-19 108.0
33 TraesCS7B01G389400 chr3A 97.368 38 1 0 41 78 638987318 638987355 6.250000e-07 65.8
34 TraesCS7B01G389400 chr4B 97.297 37 1 0 42 78 158268792 158268828 2.250000e-06 63.9
35 TraesCS7B01G389400 chr5A 89.583 48 5 0 42 89 622424458 622424505 8.080000e-06 62.1
36 TraesCS7B01G389400 chr5A 97.143 35 1 0 42 76 698324985 698325019 2.910000e-05 60.2
37 TraesCS7B01G389400 chr4A 94.737 38 1 1 2024 2061 204179637 204179673 1.050000e-04 58.4
38 TraesCS7B01G389400 chr6A 94.444 36 2 0 41 76 79346278 79346313 3.760000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G389400 chr7B 656273620 656276322 2702 True 4992.000000 4992 100.000000 1 2703 1 chr7B.!!$R2 2702
1 TraesCS7B01G389400 chr7B 656239632 656240866 1234 True 1078.000000 2030 98.234000 1446 2703 2 chr7B.!!$R4 1257
2 TraesCS7B01G389400 chr7B 656245148 656245676 528 True 883.000000 883 96.792000 918 1447 1 chr7B.!!$R1 529
3 TraesCS7B01G389400 chr7A 682175742 682183825 8083 False 1805.333333 2518 89.705667 1 2616 3 chr7A.!!$F2 2615
4 TraesCS7B01G389400 chr7A 676304330 676308492 4162 True 944.000000 1953 92.212500 744 2703 4 chr7A.!!$R3 1959
5 TraesCS7B01G389400 chr7A 677279781 677280374 593 True 592.000000 592 85.284000 2042 2616 1 chr7A.!!$R2 574
6 TraesCS7B01G389400 chr7A 676359356 676364218 4862 False 531.333333 673 88.321667 1 1770 3 chr7A.!!$F1 1769
7 TraesCS7B01G389400 chr7D 585662543 585668180 5637 True 802.000000 1210 89.954000 1 1770 3 chr7D.!!$R3 1769
8 TraesCS7B01G389400 chr7D 585655370 585657540 2170 True 668.250000 1820 92.663000 746 2696 4 chr7D.!!$R2 1950

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
435 436 0.031449 GCTCCGCACTAGAGGATGTC 59.969 60.0 0.0 0.0 43.13 3.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2277 14844 0.629058 TTTAATGGAGTGGGGAGGGC 59.371 55.0 0.0 0.0 0.0 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 6.866480 GTTGGGAGCTAATTTTCATTGATGA 58.134 36.000 0.00 0.00 34.44 2.92
25 26 7.322664 GTTGGGAGCTAATTTTCATTGATGAA 58.677 34.615 2.39 2.39 44.42 2.57
26 27 7.104043 TGGGAGCTAATTTTCATTGATGAAG 57.896 36.000 6.53 0.00 46.34 3.02
27 28 6.664816 TGGGAGCTAATTTTCATTGATGAAGT 59.335 34.615 6.53 0.00 46.34 3.01
28 29 7.833682 TGGGAGCTAATTTTCATTGATGAAGTA 59.166 33.333 6.53 1.08 46.34 2.24
29 30 8.348507 GGGAGCTAATTTTCATTGATGAAGTAG 58.651 37.037 6.53 10.06 46.34 2.57
30 31 8.348507 GGAGCTAATTTTCATTGATGAAGTAGG 58.651 37.037 14.32 0.96 46.34 3.18
31 32 9.113838 GAGCTAATTTTCATTGATGAAGTAGGA 57.886 33.333 14.32 0.00 46.34 2.94
32 33 9.118300 AGCTAATTTTCATTGATGAAGTAGGAG 57.882 33.333 14.32 4.32 46.34 3.69
33 34 9.113838 GCTAATTTTCATTGATGAAGTAGGAGA 57.886 33.333 14.32 0.00 46.34 3.71
38 39 6.968131 TCATTGATGAAGTAGGAGAAAACG 57.032 37.500 0.00 0.00 33.08 3.60
39 40 6.464222 TCATTGATGAAGTAGGAGAAAACGT 58.536 36.000 0.00 0.00 33.08 3.99
40 41 6.590292 TCATTGATGAAGTAGGAGAAAACGTC 59.410 38.462 0.00 0.00 33.08 4.34
41 42 5.462530 TGATGAAGTAGGAGAAAACGTCA 57.537 39.130 0.00 0.00 38.24 4.35
42 43 5.849510 TGATGAAGTAGGAGAAAACGTCAA 58.150 37.500 0.00 0.00 37.58 3.18
43 44 6.285224 TGATGAAGTAGGAGAAAACGTCAAA 58.715 36.000 0.00 0.00 37.58 2.69
45 46 7.444183 TGATGAAGTAGGAGAAAACGTCAAAAT 59.556 33.333 0.00 0.00 37.58 1.82
46 47 7.562454 TGAAGTAGGAGAAAACGTCAAAATT 57.438 32.000 0.00 0.00 32.39 1.82
47 48 7.414436 TGAAGTAGGAGAAAACGTCAAAATTG 58.586 34.615 0.00 0.00 32.39 2.32
48 49 6.937436 AGTAGGAGAAAACGTCAAAATTGT 57.063 33.333 0.00 0.00 0.00 2.71
49 50 8.441312 AAGTAGGAGAAAACGTCAAAATTGTA 57.559 30.769 0.00 0.00 0.00 2.41
50 51 7.858583 AGTAGGAGAAAACGTCAAAATTGTAC 58.141 34.615 0.00 0.00 0.00 2.90
51 52 6.937436 AGGAGAAAACGTCAAAATTGTACT 57.063 33.333 0.00 0.00 0.00 2.73
52 53 8.981647 GTAGGAGAAAACGTCAAAATTGTACTA 58.018 33.333 0.00 0.00 0.00 1.82
53 54 8.441312 AGGAGAAAACGTCAAAATTGTACTAA 57.559 30.769 0.00 0.00 0.00 2.24
54 55 8.895737 AGGAGAAAACGTCAAAATTGTACTAAA 58.104 29.630 0.00 0.00 0.00 1.85
55 56 9.673454 GGAGAAAACGTCAAAATTGTACTAAAT 57.327 29.630 0.00 0.00 0.00 1.40
63 64 9.658475 CGTCAAAATTGTACTAAATCAAAGACA 57.342 29.630 0.00 0.00 0.00 3.41
80 81 9.918630 ATCAAAGACACTTATTTTTGGATGAAG 57.081 29.630 0.00 0.00 32.76 3.02
81 82 9.130661 TCAAAGACACTTATTTTTGGATGAAGA 57.869 29.630 0.00 0.00 32.76 2.87
82 83 9.748708 CAAAGACACTTATTTTTGGATGAAGAA 57.251 29.630 0.00 0.00 0.00 2.52
84 85 9.971922 AAGACACTTATTTTTGGATGAAGAAAG 57.028 29.630 0.00 0.00 0.00 2.62
85 86 9.136323 AGACACTTATTTTTGGATGAAGAAAGT 57.864 29.630 0.00 0.00 0.00 2.66
92 93 8.593492 ATTTTTGGATGAAGAAAGTACAAAGC 57.407 30.769 0.00 0.00 0.00 3.51
93 94 6.707440 TTTGGATGAAGAAAGTACAAAGCA 57.293 33.333 0.00 0.00 0.00 3.91
94 95 6.707440 TTGGATGAAGAAAGTACAAAGCAA 57.293 33.333 0.00 0.00 0.00 3.91
95 96 6.707440 TGGATGAAGAAAGTACAAAGCAAA 57.293 33.333 0.00 0.00 0.00 3.68
96 97 7.106439 TGGATGAAGAAAGTACAAAGCAAAA 57.894 32.000 0.00 0.00 0.00 2.44
97 98 7.725251 TGGATGAAGAAAGTACAAAGCAAAAT 58.275 30.769 0.00 0.00 0.00 1.82
98 99 7.867403 TGGATGAAGAAAGTACAAAGCAAAATC 59.133 33.333 0.00 0.00 0.00 2.17
99 100 7.867403 GGATGAAGAAAGTACAAAGCAAAATCA 59.133 33.333 0.00 0.00 0.00 2.57
100 101 9.248291 GATGAAGAAAGTACAAAGCAAAATCAA 57.752 29.630 0.00 0.00 0.00 2.57
101 102 8.994429 TGAAGAAAGTACAAAGCAAAATCAAA 57.006 26.923 0.00 0.00 0.00 2.69
102 103 9.429359 TGAAGAAAGTACAAAGCAAAATCAAAA 57.571 25.926 0.00 0.00 0.00 2.44
103 104 9.906111 GAAGAAAGTACAAAGCAAAATCAAAAG 57.094 29.630 0.00 0.00 0.00 2.27
105 106 9.651913 AGAAAGTACAAAGCAAAATCAAAAGAA 57.348 25.926 0.00 0.00 0.00 2.52
112 113 9.394767 ACAAAGCAAAATCAAAAGAAAATAGGT 57.605 25.926 0.00 0.00 0.00 3.08
121 122 9.435688 AATCAAAAGAAAATAGGTTAATGTGGC 57.564 29.630 0.00 0.00 0.00 5.01
122 123 7.957002 TCAAAAGAAAATAGGTTAATGTGGCA 58.043 30.769 0.00 0.00 0.00 4.92
123 124 8.087750 TCAAAAGAAAATAGGTTAATGTGGCAG 58.912 33.333 0.00 0.00 0.00 4.85
124 125 7.775053 AAAGAAAATAGGTTAATGTGGCAGA 57.225 32.000 0.00 0.00 0.00 4.26
125 126 7.775053 AAGAAAATAGGTTAATGTGGCAGAA 57.225 32.000 0.00 0.00 0.00 3.02
126 127 7.961326 AGAAAATAGGTTAATGTGGCAGAAT 57.039 32.000 0.00 0.00 0.00 2.40
127 128 9.474313 AAGAAAATAGGTTAATGTGGCAGAATA 57.526 29.630 0.00 0.00 0.00 1.75
131 132 8.863872 AATAGGTTAATGTGGCAGAATATACC 57.136 34.615 0.00 0.00 0.00 2.73
132 133 6.260700 AGGTTAATGTGGCAGAATATACCA 57.739 37.500 11.06 0.00 0.00 3.25
137 138 2.480845 GTGGCAGAATATACCACGTCC 58.519 52.381 0.00 0.00 44.02 4.79
138 139 1.067974 TGGCAGAATATACCACGTCCG 59.932 52.381 0.00 0.00 0.00 4.79
139 140 1.068127 GGCAGAATATACCACGTCCGT 59.932 52.381 0.00 0.00 0.00 4.69
144 145 3.570975 AGAATATACCACGTCCGTATGCA 59.429 43.478 12.89 0.00 0.00 3.96
145 146 4.038282 AGAATATACCACGTCCGTATGCAA 59.962 41.667 12.89 0.00 0.00 4.08
146 147 2.902705 ATACCACGTCCGTATGCAAT 57.097 45.000 0.00 0.00 0.00 3.56
148 149 0.742990 ACCACGTCCGTATGCAATGG 60.743 55.000 0.00 0.00 35.30 3.16
149 150 1.351707 CACGTCCGTATGCAATGGC 59.648 57.895 0.00 0.00 41.68 4.40
188 189 2.711978 GGGGGTTGATGAGTCTAACC 57.288 55.000 13.02 13.02 42.39 2.85
189 190 1.913419 GGGGGTTGATGAGTCTAACCA 59.087 52.381 19.25 0.41 44.37 3.67
190 191 2.509964 GGGGGTTGATGAGTCTAACCAT 59.490 50.000 19.25 0.00 44.37 3.55
191 192 3.433740 GGGGGTTGATGAGTCTAACCATC 60.434 52.174 19.25 13.18 44.37 3.51
192 193 3.199946 GGGGTTGATGAGTCTAACCATCA 59.800 47.826 19.25 0.00 45.03 3.07
193 194 4.446371 GGGTTGATGAGTCTAACCATCAG 58.554 47.826 19.25 0.00 46.52 2.90
194 195 4.162320 GGGTTGATGAGTCTAACCATCAGA 59.838 45.833 19.25 0.00 46.52 3.27
195 196 5.355596 GGTTGATGAGTCTAACCATCAGAG 58.644 45.833 15.25 0.00 46.52 3.35
198 199 5.449553 TGATGAGTCTAACCATCAGAGCTA 58.550 41.667 0.00 0.00 42.76 3.32
199 200 5.893824 TGATGAGTCTAACCATCAGAGCTAA 59.106 40.000 0.00 0.00 42.76 3.09
200 201 6.552725 TGATGAGTCTAACCATCAGAGCTAAT 59.447 38.462 0.00 0.00 42.76 1.73
201 202 7.725844 TGATGAGTCTAACCATCAGAGCTAATA 59.274 37.037 0.00 0.00 42.76 0.98
202 203 7.278461 TGAGTCTAACCATCAGAGCTAATAC 57.722 40.000 0.00 0.00 0.00 1.89
203 204 6.265649 TGAGTCTAACCATCAGAGCTAATACC 59.734 42.308 0.00 0.00 0.00 2.73
204 205 6.377912 AGTCTAACCATCAGAGCTAATACCT 58.622 40.000 0.00 0.00 0.00 3.08
205 206 6.841755 AGTCTAACCATCAGAGCTAATACCTT 59.158 38.462 0.00 0.00 0.00 3.50
206 207 7.014808 AGTCTAACCATCAGAGCTAATACCTTC 59.985 40.741 0.00 0.00 0.00 3.46
207 208 7.014808 GTCTAACCATCAGAGCTAATACCTTCT 59.985 40.741 0.00 0.00 0.00 2.85
208 209 5.799827 ACCATCAGAGCTAATACCTTCTC 57.200 43.478 0.00 0.00 0.00 2.87
209 210 5.463154 ACCATCAGAGCTAATACCTTCTCT 58.537 41.667 0.00 0.00 36.43 3.10
211 212 6.719370 ACCATCAGAGCTAATACCTTCTCTAG 59.281 42.308 0.00 0.00 34.45 2.43
212 213 6.350110 CCATCAGAGCTAATACCTTCTCTAGC 60.350 46.154 0.00 0.00 37.60 3.42
213 214 5.696030 TCAGAGCTAATACCTTCTCTAGCA 58.304 41.667 3.07 0.00 39.39 3.49
214 215 6.310941 TCAGAGCTAATACCTTCTCTAGCAT 58.689 40.000 3.07 0.00 39.39 3.79
215 216 7.462590 TCAGAGCTAATACCTTCTCTAGCATA 58.537 38.462 3.07 0.00 39.39 3.14
216 217 8.112822 TCAGAGCTAATACCTTCTCTAGCATAT 58.887 37.037 3.07 0.00 39.39 1.78
218 219 8.112822 AGAGCTAATACCTTCTCTAGCATATCA 58.887 37.037 3.07 0.00 39.39 2.15
219 220 8.062065 AGCTAATACCTTCTCTAGCATATCAC 57.938 38.462 3.07 0.00 39.39 3.06
220 221 7.893302 AGCTAATACCTTCTCTAGCATATCACT 59.107 37.037 3.07 0.00 39.39 3.41
221 222 8.527810 GCTAATACCTTCTCTAGCATATCACTT 58.472 37.037 0.00 0.00 37.35 3.16
226 227 8.312669 ACCTTCTCTAGCATATCACTTAAACT 57.687 34.615 0.00 0.00 0.00 2.66
227 228 8.763601 ACCTTCTCTAGCATATCACTTAAACTT 58.236 33.333 0.00 0.00 0.00 2.66
236 237 9.474313 AGCATATCACTTAAACTTAATTCCCAA 57.526 29.630 0.00 0.00 0.00 4.12
240 241 8.721133 ATCACTTAAACTTAATTCCCAAACCT 57.279 30.769 0.00 0.00 0.00 3.50
241 242 8.541899 TCACTTAAACTTAATTCCCAAACCTT 57.458 30.769 0.00 0.00 0.00 3.50
242 243 8.635328 TCACTTAAACTTAATTCCCAAACCTTC 58.365 33.333 0.00 0.00 0.00 3.46
245 246 6.665992 AAACTTAATTCCCAAACCTTCTCC 57.334 37.500 0.00 0.00 0.00 3.71
246 247 4.673968 ACTTAATTCCCAAACCTTCTCCC 58.326 43.478 0.00 0.00 0.00 4.30
247 248 4.357097 ACTTAATTCCCAAACCTTCTCCCT 59.643 41.667 0.00 0.00 0.00 4.20
248 249 5.554350 ACTTAATTCCCAAACCTTCTCCCTA 59.446 40.000 0.00 0.00 0.00 3.53
250 251 4.797912 ATTCCCAAACCTTCTCCCTATC 57.202 45.455 0.00 0.00 0.00 2.08
251 252 2.488836 TCCCAAACCTTCTCCCTATCC 58.511 52.381 0.00 0.00 0.00 2.59
252 253 1.495148 CCCAAACCTTCTCCCTATCCC 59.505 57.143 0.00 0.00 0.00 3.85
253 254 1.495148 CCAAACCTTCTCCCTATCCCC 59.505 57.143 0.00 0.00 0.00 4.81
254 255 2.205342 CAAACCTTCTCCCTATCCCCA 58.795 52.381 0.00 0.00 0.00 4.96
255 256 2.580783 CAAACCTTCTCCCTATCCCCAA 59.419 50.000 0.00 0.00 0.00 4.12
256 257 2.680439 ACCTTCTCCCTATCCCCAAA 57.320 50.000 0.00 0.00 0.00 3.28
257 258 2.942905 ACCTTCTCCCTATCCCCAAAA 58.057 47.619 0.00 0.00 0.00 2.44
259 260 3.864770 ACCTTCTCCCTATCCCCAAAATT 59.135 43.478 0.00 0.00 0.00 1.82
260 261 4.079154 ACCTTCTCCCTATCCCCAAAATTC 60.079 45.833 0.00 0.00 0.00 2.17
261 262 4.079212 CCTTCTCCCTATCCCCAAAATTCA 60.079 45.833 0.00 0.00 0.00 2.57
262 263 5.518865 CTTCTCCCTATCCCCAAAATTCAA 58.481 41.667 0.00 0.00 0.00 2.69
263 264 5.749422 TCTCCCTATCCCCAAAATTCAAT 57.251 39.130 0.00 0.00 0.00 2.57
264 265 6.857083 TCTCCCTATCCCCAAAATTCAATA 57.143 37.500 0.00 0.00 0.00 1.90
266 267 7.836142 TCTCCCTATCCCCAAAATTCAATAAT 58.164 34.615 0.00 0.00 0.00 1.28
267 268 8.296166 TCTCCCTATCCCCAAAATTCAATAATT 58.704 33.333 0.00 0.00 36.87 1.40
268 269 8.868404 TCCCTATCCCCAAAATTCAATAATTT 57.132 30.769 0.00 0.00 45.20 1.82
291 292 9.987272 ATTTTGAGGGATTAAACTTTTTCTCAG 57.013 29.630 0.00 0.00 32.62 3.35
293 294 6.306987 TGAGGGATTAAACTTTTTCTCAGCT 58.693 36.000 0.00 0.00 0.00 4.24
294 295 7.458397 TGAGGGATTAAACTTTTTCTCAGCTA 58.542 34.615 0.00 0.00 0.00 3.32
296 297 6.375736 AGGGATTAAACTTTTTCTCAGCTAGC 59.624 38.462 6.62 6.62 0.00 3.42
297 298 6.151144 GGGATTAAACTTTTTCTCAGCTAGCA 59.849 38.462 18.83 0.00 0.00 3.49
299 300 7.119846 GGATTAAACTTTTTCTCAGCTAGCAGA 59.880 37.037 18.83 14.02 0.00 4.26
300 301 7.986085 TTAAACTTTTTCTCAGCTAGCAGAT 57.014 32.000 18.83 0.00 0.00 2.90
302 303 4.512484 ACTTTTTCTCAGCTAGCAGATCC 58.488 43.478 18.83 0.00 0.00 3.36
304 305 1.418334 TTCTCAGCTAGCAGATCCCC 58.582 55.000 18.83 0.00 0.00 4.81
305 306 0.560193 TCTCAGCTAGCAGATCCCCT 59.440 55.000 18.83 0.00 0.00 4.79
306 307 1.783365 TCTCAGCTAGCAGATCCCCTA 59.217 52.381 18.83 0.00 0.00 3.53
307 308 2.177888 TCTCAGCTAGCAGATCCCCTAA 59.822 50.000 18.83 0.00 0.00 2.69
309 310 2.700897 TCAGCTAGCAGATCCCCTAAAC 59.299 50.000 18.83 0.00 0.00 2.01
310 311 2.703007 CAGCTAGCAGATCCCCTAAACT 59.297 50.000 18.83 0.00 0.00 2.66
311 312 3.135530 CAGCTAGCAGATCCCCTAAACTT 59.864 47.826 18.83 0.00 0.00 2.66
313 314 4.969359 AGCTAGCAGATCCCCTAAACTTAA 59.031 41.667 18.83 0.00 0.00 1.85
314 315 5.608860 AGCTAGCAGATCCCCTAAACTTAAT 59.391 40.000 18.83 0.00 0.00 1.40
315 316 5.935206 GCTAGCAGATCCCCTAAACTTAATC 59.065 44.000 10.63 0.00 0.00 1.75
316 317 5.311844 AGCAGATCCCCTAAACTTAATCC 57.688 43.478 0.00 0.00 0.00 3.01
317 318 4.104897 AGCAGATCCCCTAAACTTAATCCC 59.895 45.833 0.00 0.00 0.00 3.85
319 320 5.746361 GCAGATCCCCTAAACTTAATCCCTC 60.746 48.000 0.00 0.00 0.00 4.30
320 321 5.369699 CAGATCCCCTAAACTTAATCCCTCA 59.630 44.000 0.00 0.00 0.00 3.86
321 322 5.976870 AGATCCCCTAAACTTAATCCCTCAA 59.023 40.000 0.00 0.00 0.00 3.02
322 323 6.450352 AGATCCCCTAAACTTAATCCCTCAAA 59.550 38.462 0.00 0.00 0.00 2.69
323 324 5.823312 TCCCCTAAACTTAATCCCTCAAAC 58.177 41.667 0.00 0.00 0.00 2.93
324 325 4.954202 CCCCTAAACTTAATCCCTCAAACC 59.046 45.833 0.00 0.00 0.00 3.27
325 326 5.517655 CCCCTAAACTTAATCCCTCAAACCA 60.518 44.000 0.00 0.00 0.00 3.67
326 327 6.014012 CCCTAAACTTAATCCCTCAAACCAA 58.986 40.000 0.00 0.00 0.00 3.67
327 328 6.071560 CCCTAAACTTAATCCCTCAAACCAAC 60.072 42.308 0.00 0.00 0.00 3.77
328 329 5.447624 AAACTTAATCCCTCAAACCAACG 57.552 39.130 0.00 0.00 0.00 4.10
329 330 4.360951 ACTTAATCCCTCAAACCAACGA 57.639 40.909 0.00 0.00 0.00 3.85
330 331 4.070009 ACTTAATCCCTCAAACCAACGAC 58.930 43.478 0.00 0.00 0.00 4.34
331 332 1.905637 AATCCCTCAAACCAACGACC 58.094 50.000 0.00 0.00 0.00 4.79
332 333 0.037734 ATCCCTCAAACCAACGACCC 59.962 55.000 0.00 0.00 0.00 4.46
333 334 1.602605 CCCTCAAACCAACGACCCC 60.603 63.158 0.00 0.00 0.00 4.95
334 335 1.149627 CCTCAAACCAACGACCCCA 59.850 57.895 0.00 0.00 0.00 4.96
335 336 1.170290 CCTCAAACCAACGACCCCAC 61.170 60.000 0.00 0.00 0.00 4.61
336 337 0.464735 CTCAAACCAACGACCCCACA 60.465 55.000 0.00 0.00 0.00 4.17
337 338 0.183971 TCAAACCAACGACCCCACAT 59.816 50.000 0.00 0.00 0.00 3.21
338 339 0.313672 CAAACCAACGACCCCACATG 59.686 55.000 0.00 0.00 0.00 3.21
342 343 0.538516 CCAACGACCCCACATGGAAA 60.539 55.000 0.00 0.00 37.39 3.13
343 344 0.596082 CAACGACCCCACATGGAAAC 59.404 55.000 0.00 0.00 37.39 2.78
344 345 0.538746 AACGACCCCACATGGAAACC 60.539 55.000 0.00 0.00 37.39 3.27
346 347 0.676782 CGACCCCACATGGAAACCTC 60.677 60.000 0.00 0.00 37.39 3.85
347 348 0.698818 GACCCCACATGGAAACCTCT 59.301 55.000 0.00 0.00 37.39 3.69
348 349 0.698818 ACCCCACATGGAAACCTCTC 59.301 55.000 0.00 0.00 37.39 3.20
349 350 0.698238 CCCCACATGGAAACCTCTCA 59.302 55.000 0.00 0.00 37.39 3.27
350 351 1.285962 CCCCACATGGAAACCTCTCAT 59.714 52.381 0.00 0.00 37.39 2.90
351 352 2.648059 CCCACATGGAAACCTCTCATC 58.352 52.381 0.00 0.00 37.39 2.92
352 353 2.025981 CCCACATGGAAACCTCTCATCA 60.026 50.000 0.00 0.00 37.39 3.07
353 354 3.372349 CCCACATGGAAACCTCTCATCAT 60.372 47.826 0.00 0.00 37.39 2.45
354 355 3.881688 CCACATGGAAACCTCTCATCATC 59.118 47.826 0.00 0.00 37.39 2.92
355 356 4.384978 CCACATGGAAACCTCTCATCATCT 60.385 45.833 0.00 0.00 37.39 2.90
357 358 4.226846 ACATGGAAACCTCTCATCATCTGT 59.773 41.667 0.00 0.00 0.00 3.41
358 359 4.478206 TGGAAACCTCTCATCATCTGTC 57.522 45.455 0.00 0.00 0.00 3.51
359 360 4.099633 TGGAAACCTCTCATCATCTGTCT 58.900 43.478 0.00 0.00 0.00 3.41
360 361 4.533707 TGGAAACCTCTCATCATCTGTCTT 59.466 41.667 0.00 0.00 0.00 3.01
361 362 5.115480 GGAAACCTCTCATCATCTGTCTTC 58.885 45.833 0.00 0.00 0.00 2.87
362 363 4.751767 AACCTCTCATCATCTGTCTTCC 57.248 45.455 0.00 0.00 0.00 3.46
364 365 4.360889 ACCTCTCATCATCTGTCTTCCTT 58.639 43.478 0.00 0.00 0.00 3.36
365 366 4.405358 ACCTCTCATCATCTGTCTTCCTTC 59.595 45.833 0.00 0.00 0.00 3.46
366 367 4.650588 CCTCTCATCATCTGTCTTCCTTCT 59.349 45.833 0.00 0.00 0.00 2.85
367 368 5.129155 CCTCTCATCATCTGTCTTCCTTCTT 59.871 44.000 0.00 0.00 0.00 2.52
368 369 6.219417 TCTCATCATCTGTCTTCCTTCTTC 57.781 41.667 0.00 0.00 0.00 2.87
369 370 5.128499 TCTCATCATCTGTCTTCCTTCTTCC 59.872 44.000 0.00 0.00 0.00 3.46
370 371 5.028802 TCATCATCTGTCTTCCTTCTTCCT 58.971 41.667 0.00 0.00 0.00 3.36
371 372 5.486775 TCATCATCTGTCTTCCTTCTTCCTT 59.513 40.000 0.00 0.00 0.00 3.36
372 373 5.832539 TCATCTGTCTTCCTTCTTCCTTT 57.167 39.130 0.00 0.00 0.00 3.11
373 374 6.192970 TCATCTGTCTTCCTTCTTCCTTTT 57.807 37.500 0.00 0.00 0.00 2.27
374 375 6.605119 TCATCTGTCTTCCTTCTTCCTTTTT 58.395 36.000 0.00 0.00 0.00 1.94
375 376 6.712547 TCATCTGTCTTCCTTCTTCCTTTTTC 59.287 38.462 0.00 0.00 0.00 2.29
376 377 5.377478 TCTGTCTTCCTTCTTCCTTTTTCC 58.623 41.667 0.00 0.00 0.00 3.13
378 379 5.766590 TGTCTTCCTTCTTCCTTTTTCCTT 58.233 37.500 0.00 0.00 0.00 3.36
379 380 5.828328 TGTCTTCCTTCTTCCTTTTTCCTTC 59.172 40.000 0.00 0.00 0.00 3.46
380 381 6.065374 GTCTTCCTTCTTCCTTTTTCCTTCT 58.935 40.000 0.00 0.00 0.00 2.85
381 382 6.547880 GTCTTCCTTCTTCCTTTTTCCTTCTT 59.452 38.462 0.00 0.00 0.00 2.52
382 383 6.773200 TCTTCCTTCTTCCTTTTTCCTTCTTC 59.227 38.462 0.00 0.00 0.00 2.87
383 384 6.267492 TCCTTCTTCCTTTTTCCTTCTTCT 57.733 37.500 0.00 0.00 0.00 2.85
384 385 6.673583 TCCTTCTTCCTTTTTCCTTCTTCTT 58.326 36.000 0.00 0.00 0.00 2.52
386 387 7.285629 TCCTTCTTCCTTTTTCCTTCTTCTTTC 59.714 37.037 0.00 0.00 0.00 2.62
387 388 7.286546 CCTTCTTCCTTTTTCCTTCTTCTTTCT 59.713 37.037 0.00 0.00 0.00 2.52
388 389 8.595362 TTCTTCCTTTTTCCTTCTTCTTTCTT 57.405 30.769 0.00 0.00 0.00 2.52
389 390 8.226819 TCTTCCTTTTTCCTTCTTCTTTCTTC 57.773 34.615 0.00 0.00 0.00 2.87
390 391 8.055790 TCTTCCTTTTTCCTTCTTCTTTCTTCT 58.944 33.333 0.00 0.00 0.00 2.85
391 392 8.595362 TTCCTTTTTCCTTCTTCTTTCTTCTT 57.405 30.769 0.00 0.00 0.00 2.52
392 393 8.226819 TCCTTTTTCCTTCTTCTTTCTTCTTC 57.773 34.615 0.00 0.00 0.00 2.87
393 394 7.285629 TCCTTTTTCCTTCTTCTTTCTTCTTCC 59.714 37.037 0.00 0.00 0.00 3.46
395 396 8.595362 TTTTTCCTTCTTCTTTCTTCTTCCTT 57.405 30.769 0.00 0.00 0.00 3.36
396 397 7.573968 TTTCCTTCTTCTTTCTTCTTCCTTG 57.426 36.000 0.00 0.00 0.00 3.61
397 398 5.066593 TCCTTCTTCTTTCTTCTTCCTTGC 58.933 41.667 0.00 0.00 0.00 4.01
398 399 4.823989 CCTTCTTCTTTCTTCTTCCTTGCA 59.176 41.667 0.00 0.00 0.00 4.08
399 400 5.278218 CCTTCTTCTTTCTTCTTCCTTGCAC 60.278 44.000 0.00 0.00 0.00 4.57
400 401 4.780815 TCTTCTTTCTTCTTCCTTGCACA 58.219 39.130 0.00 0.00 0.00 4.57
401 402 4.576463 TCTTCTTTCTTCTTCCTTGCACAC 59.424 41.667 0.00 0.00 0.00 3.82
402 403 2.872245 TCTTTCTTCTTCCTTGCACACG 59.128 45.455 0.00 0.00 0.00 4.49
403 404 1.593196 TTCTTCTTCCTTGCACACGG 58.407 50.000 0.00 0.00 0.00 4.94
404 405 0.756294 TCTTCTTCCTTGCACACGGA 59.244 50.000 0.00 0.00 0.00 4.69
405 406 0.868406 CTTCTTCCTTGCACACGGAC 59.132 55.000 0.00 0.00 0.00 4.79
406 407 0.179234 TTCTTCCTTGCACACGGACA 59.821 50.000 0.00 0.00 0.00 4.02
407 408 0.179234 TCTTCCTTGCACACGGACAA 59.821 50.000 0.00 0.00 0.00 3.18
409 410 0.393132 TTCCTTGCACACGGACAACA 60.393 50.000 0.00 0.00 0.00 3.33
410 411 0.393132 TCCTTGCACACGGACAACAA 60.393 50.000 0.00 0.00 0.00 2.83
411 412 0.248458 CCTTGCACACGGACAACAAC 60.248 55.000 0.00 0.00 0.00 3.32
413 414 1.019805 TTGCACACGGACAACAACGA 61.020 50.000 0.00 0.00 0.00 3.85
414 415 0.812014 TGCACACGGACAACAACGAT 60.812 50.000 0.00 0.00 0.00 3.73
417 418 0.306533 ACACGGACAACAACGATTGC 59.693 50.000 0.00 0.00 32.47 3.56
418 419 0.586319 CACGGACAACAACGATTGCT 59.414 50.000 0.00 0.00 32.47 3.91
419 420 0.865769 ACGGACAACAACGATTGCTC 59.134 50.000 0.00 0.00 32.47 4.26
420 421 0.165944 CGGACAACAACGATTGCTCC 59.834 55.000 0.00 0.71 32.47 4.70
422 423 0.452784 GACAACAACGATTGCTCCGC 60.453 55.000 0.00 0.00 32.47 5.54
423 424 1.163420 ACAACAACGATTGCTCCGCA 61.163 50.000 0.00 0.00 36.47 5.69
424 425 0.725784 CAACAACGATTGCTCCGCAC 60.726 55.000 0.00 0.00 38.71 5.34
425 426 0.884704 AACAACGATTGCTCCGCACT 60.885 50.000 0.00 0.00 38.71 4.40
426 427 0.037697 ACAACGATTGCTCCGCACTA 60.038 50.000 0.00 0.00 38.71 2.74
428 429 0.530744 AACGATTGCTCCGCACTAGA 59.469 50.000 0.00 0.00 38.71 2.43
429 430 0.101399 ACGATTGCTCCGCACTAGAG 59.899 55.000 0.00 0.00 38.71 2.43
430 431 0.596083 CGATTGCTCCGCACTAGAGG 60.596 60.000 0.00 0.00 38.71 3.69
431 432 0.747255 GATTGCTCCGCACTAGAGGA 59.253 55.000 0.00 1.33 41.79 3.71
432 433 1.342819 GATTGCTCCGCACTAGAGGAT 59.657 52.381 0.00 0.00 43.13 3.24
433 434 0.461548 TTGCTCCGCACTAGAGGATG 59.538 55.000 0.00 0.00 43.13 3.51
434 435 0.684479 TGCTCCGCACTAGAGGATGT 60.684 55.000 0.00 0.00 43.13 3.06
435 436 0.031449 GCTCCGCACTAGAGGATGTC 59.969 60.000 0.00 0.00 43.13 3.06
436 437 0.671251 CTCCGCACTAGAGGATGTCC 59.329 60.000 0.00 0.00 43.13 4.02
437 438 0.033503 TCCGCACTAGAGGATGTCCA 60.034 55.000 0.00 0.00 38.94 4.02
438 439 1.043816 CCGCACTAGAGGATGTCCAT 58.956 55.000 0.00 0.00 36.74 3.41
439 440 1.269988 CCGCACTAGAGGATGTCCATG 60.270 57.143 0.00 0.00 36.74 3.66
441 442 2.288091 CGCACTAGAGGATGTCCATGAG 60.288 54.545 0.00 0.00 38.89 2.90
442 443 2.547642 GCACTAGAGGATGTCCATGAGC 60.548 54.545 0.00 0.00 38.89 4.26
445 446 4.218200 CACTAGAGGATGTCCATGAGCTAG 59.782 50.000 0.00 0.00 38.89 3.42
446 447 1.969923 AGAGGATGTCCATGAGCTAGC 59.030 52.381 6.62 6.62 38.89 3.42
447 448 1.969923 GAGGATGTCCATGAGCTAGCT 59.030 52.381 19.45 19.45 38.89 3.32
448 449 3.161067 GAGGATGTCCATGAGCTAGCTA 58.839 50.000 19.38 6.79 38.89 3.32
449 450 3.164268 AGGATGTCCATGAGCTAGCTAG 58.836 50.000 19.38 16.84 38.89 3.42
451 452 2.461300 TGTCCATGAGCTAGCTAGGT 57.539 50.000 24.94 24.94 36.62 3.08
452 453 6.121757 GGATGTCCATGAGCTAGCTAGGTC 62.122 54.167 35.42 35.42 41.96 3.85
459 460 3.232720 GAGCTAGCTAGGTCCTAAGGT 57.767 52.381 33.32 10.71 43.17 3.50
461 462 3.301274 AGCTAGCTAGGTCCTAAGGTTG 58.699 50.000 17.69 3.11 0.00 3.77
462 463 3.052793 AGCTAGCTAGGTCCTAAGGTTGA 60.053 47.826 17.69 0.00 0.00 3.18
463 464 3.705072 GCTAGCTAGGTCCTAAGGTTGAA 59.295 47.826 22.10 0.00 0.00 2.69
464 465 4.202172 GCTAGCTAGGTCCTAAGGTTGAAG 60.202 50.000 22.10 0.00 0.00 3.02
466 467 4.625963 AGCTAGGTCCTAAGGTTGAAGAT 58.374 43.478 0.00 0.00 0.00 2.40
467 468 4.651962 AGCTAGGTCCTAAGGTTGAAGATC 59.348 45.833 0.00 0.00 0.00 2.75
468 469 4.202274 GCTAGGTCCTAAGGTTGAAGATCC 60.202 50.000 0.00 0.00 0.00 3.36
469 470 3.803340 AGGTCCTAAGGTTGAAGATCCA 58.197 45.455 0.00 0.00 0.00 3.41
470 471 3.519913 AGGTCCTAAGGTTGAAGATCCAC 59.480 47.826 0.00 0.00 0.00 4.02
471 472 3.263425 GGTCCTAAGGTTGAAGATCCACA 59.737 47.826 0.00 0.00 0.00 4.17
472 473 4.263331 GGTCCTAAGGTTGAAGATCCACAA 60.263 45.833 0.00 0.00 0.00 3.33
475 476 6.003950 TCCTAAGGTTGAAGATCCACAAAAG 58.996 40.000 4.17 1.75 0.00 2.27
476 477 5.770162 CCTAAGGTTGAAGATCCACAAAAGT 59.230 40.000 4.17 0.00 0.00 2.66
477 478 6.940298 CCTAAGGTTGAAGATCCACAAAAGTA 59.060 38.462 4.17 0.00 0.00 2.24
478 479 7.447238 CCTAAGGTTGAAGATCCACAAAAGTAA 59.553 37.037 4.17 0.00 0.00 2.24
481 482 8.250143 AGGTTGAAGATCCACAAAAGTAATTT 57.750 30.769 4.17 0.00 0.00 1.82
497 498 8.492673 AAAGTAATTTGATAGAGTCGCAATGA 57.507 30.769 0.00 0.00 0.00 2.57
498 499 7.706281 AGTAATTTGATAGAGTCGCAATGAG 57.294 36.000 0.00 0.00 0.00 2.90
500 501 3.459232 TTGATAGAGTCGCAATGAGGG 57.541 47.619 0.00 0.00 0.00 4.30
501 502 1.069204 TGATAGAGTCGCAATGAGGGC 59.931 52.381 0.00 0.00 0.00 5.19
509 510 1.447140 GCAATGAGGGCGACGTACA 60.447 57.895 0.00 0.00 0.00 2.90
510 511 1.693083 GCAATGAGGGCGACGTACAC 61.693 60.000 0.00 0.00 0.00 2.90
537 538 2.828874 GAAGGAGTCGAGAACGTAGG 57.171 55.000 0.00 0.00 40.69 3.18
538 539 0.810016 AAGGAGTCGAGAACGTAGGC 59.190 55.000 0.00 0.00 40.69 3.93
539 540 1.062206 GGAGTCGAGAACGTAGGCG 59.938 63.158 0.00 0.00 44.93 5.52
540 541 1.062206 GAGTCGAGAACGTAGGCGG 59.938 63.158 0.00 0.00 43.45 6.13
541 542 1.364626 GAGTCGAGAACGTAGGCGGA 61.365 60.000 0.00 0.00 43.45 5.54
542 543 0.957395 AGTCGAGAACGTAGGCGGAA 60.957 55.000 0.00 0.00 43.45 4.30
543 544 0.100146 GTCGAGAACGTAGGCGGAAT 59.900 55.000 0.00 0.00 43.45 3.01
544 545 0.813184 TCGAGAACGTAGGCGGAATT 59.187 50.000 0.00 0.00 43.45 2.17
545 546 1.197910 CGAGAACGTAGGCGGAATTC 58.802 55.000 0.00 0.00 43.45 2.17
546 547 1.468565 CGAGAACGTAGGCGGAATTCA 60.469 52.381 7.93 0.00 43.45 2.57
547 548 1.925185 GAGAACGTAGGCGGAATTCAC 59.075 52.381 7.93 0.00 43.45 3.18
548 549 1.004595 GAACGTAGGCGGAATTCACC 58.995 55.000 7.93 8.18 43.45 4.02
550 551 0.611714 ACGTAGGCGGAATTCACCTT 59.388 50.000 20.68 4.56 43.45 3.50
551 552 1.287425 CGTAGGCGGAATTCACCTTC 58.713 55.000 20.68 15.67 34.92 3.46
552 553 1.664873 GTAGGCGGAATTCACCTTCC 58.335 55.000 20.68 10.84 41.16 3.46
553 554 1.065709 GTAGGCGGAATTCACCTTCCA 60.066 52.381 20.68 4.56 44.18 3.53
554 555 0.322546 AGGCGGAATTCACCTTCCAC 60.323 55.000 12.32 0.00 44.18 4.02
555 556 1.644786 GGCGGAATTCACCTTCCACG 61.645 60.000 7.93 0.00 44.18 4.94
556 557 1.644786 GCGGAATTCACCTTCCACGG 61.645 60.000 7.93 0.00 44.18 4.94
558 559 1.313091 GGAATTCACCTTCCACGGGC 61.313 60.000 7.93 0.00 43.56 6.13
559 560 0.608035 GAATTCACCTTCCACGGGCA 60.608 55.000 0.00 0.00 0.00 5.36
560 561 0.178975 AATTCACCTTCCACGGGCAA 60.179 50.000 0.00 0.00 0.00 4.52
561 562 0.893727 ATTCACCTTCCACGGGCAAC 60.894 55.000 0.00 0.00 0.00 4.17
571 572 3.283684 CGGGCAACGGTTTGAGCA 61.284 61.111 4.39 0.00 39.42 4.26
572 573 2.335011 GGGCAACGGTTTGAGCAC 59.665 61.111 4.39 0.00 34.24 4.40
574 575 1.733526 GGCAACGGTTTGAGCACTT 59.266 52.632 4.39 0.00 34.24 3.16
576 577 0.663153 GCAACGGTTTGAGCACTTCT 59.337 50.000 0.00 0.00 34.24 2.85
577 578 1.065551 GCAACGGTTTGAGCACTTCTT 59.934 47.619 0.00 0.00 34.24 2.52
578 579 2.854805 GCAACGGTTTGAGCACTTCTTC 60.855 50.000 0.00 0.00 34.24 2.87
579 580 1.217882 ACGGTTTGAGCACTTCTTCG 58.782 50.000 0.00 0.00 0.00 3.79
582 583 1.940613 GGTTTGAGCACTTCTTCGTGT 59.059 47.619 0.00 0.00 37.24 4.49
583 584 2.286418 GGTTTGAGCACTTCTTCGTGTG 60.286 50.000 0.00 0.00 37.24 3.82
585 586 2.595124 TGAGCACTTCTTCGTGTGAA 57.405 45.000 0.00 0.00 37.24 3.18
586 587 3.111853 TGAGCACTTCTTCGTGTGAAT 57.888 42.857 0.00 0.00 37.24 2.57
587 588 2.802247 TGAGCACTTCTTCGTGTGAATG 59.198 45.455 0.00 0.00 37.24 2.67
589 590 3.062763 AGCACTTCTTCGTGTGAATGAG 58.937 45.455 0.00 0.00 37.24 2.90
590 591 2.802816 GCACTTCTTCGTGTGAATGAGT 59.197 45.455 0.00 0.00 37.24 3.41
591 592 3.248602 GCACTTCTTCGTGTGAATGAGTT 59.751 43.478 0.00 0.00 37.24 3.01
592 593 4.609336 GCACTTCTTCGTGTGAATGAGTTC 60.609 45.833 0.00 0.00 37.24 3.01
594 595 5.235186 CACTTCTTCGTGTGAATGAGTTCTT 59.765 40.000 0.00 0.00 36.38 2.52
595 596 5.463724 ACTTCTTCGTGTGAATGAGTTCTTC 59.536 40.000 0.00 0.00 35.33 2.87
597 598 5.223382 TCTTCGTGTGAATGAGTTCTTCTC 58.777 41.667 0.00 0.00 43.03 2.87
598 599 3.914312 TCGTGTGAATGAGTTCTTCTCC 58.086 45.455 0.00 0.00 42.12 3.71
599 600 3.574396 TCGTGTGAATGAGTTCTTCTCCT 59.426 43.478 0.00 0.00 42.12 3.69
600 601 3.923461 CGTGTGAATGAGTTCTTCTCCTC 59.077 47.826 0.00 0.00 42.12 3.71
601 602 4.321601 CGTGTGAATGAGTTCTTCTCCTCT 60.322 45.833 0.00 0.00 42.12 3.69
602 603 5.546526 GTGTGAATGAGTTCTTCTCCTCTT 58.453 41.667 0.00 0.00 42.12 2.85
603 604 5.637387 GTGTGAATGAGTTCTTCTCCTCTTC 59.363 44.000 0.00 0.00 42.12 2.87
604 605 5.541868 TGTGAATGAGTTCTTCTCCTCTTCT 59.458 40.000 0.00 0.00 42.12 2.85
605 606 6.099341 GTGAATGAGTTCTTCTCCTCTTCTC 58.901 44.000 0.00 0.00 42.12 2.87
606 607 5.186797 TGAATGAGTTCTTCTCCTCTTCTCC 59.813 44.000 0.00 0.00 42.12 3.71
607 608 4.396357 TGAGTTCTTCTCCTCTTCTCCT 57.604 45.455 0.00 0.00 42.12 3.69
608 609 5.522315 TGAGTTCTTCTCCTCTTCTCCTA 57.478 43.478 0.00 0.00 42.12 2.94
609 610 5.505780 TGAGTTCTTCTCCTCTTCTCCTAG 58.494 45.833 0.00 0.00 42.12 3.02
610 611 5.014755 TGAGTTCTTCTCCTCTTCTCCTAGT 59.985 44.000 0.00 0.00 42.12 2.57
611 612 5.261216 AGTTCTTCTCCTCTTCTCCTAGTG 58.739 45.833 0.00 0.00 0.00 2.74
612 613 4.243793 TCTTCTCCTCTTCTCCTAGTGG 57.756 50.000 0.00 0.00 0.00 4.00
613 614 2.445682 TCTCCTCTTCTCCTAGTGGC 57.554 55.000 0.00 0.00 0.00 5.01
614 615 1.641192 TCTCCTCTTCTCCTAGTGGCA 59.359 52.381 0.00 0.00 0.00 4.92
616 617 1.641192 TCCTCTTCTCCTAGTGGCAGA 59.359 52.381 0.00 0.00 0.00 4.26
618 619 2.430332 CCTCTTCTCCTAGTGGCAGAAG 59.570 54.545 0.77 0.77 42.41 2.85
620 621 0.905357 TTCTCCTAGTGGCAGAAGGC 59.095 55.000 9.69 0.00 43.74 4.35
627 628 2.356278 TGGCAGAAGGCATGGTCC 59.644 61.111 0.00 0.00 46.46 4.46
629 630 2.079088 TGGCAGAAGGCATGGTCCAA 62.079 55.000 0.00 0.00 46.46 3.53
631 632 0.968405 GCAGAAGGCATGGTCCAAAA 59.032 50.000 0.00 0.00 43.97 2.44
632 633 1.551883 GCAGAAGGCATGGTCCAAAAT 59.448 47.619 0.00 0.00 43.97 1.82
633 634 2.675889 GCAGAAGGCATGGTCCAAAATG 60.676 50.000 0.00 0.00 43.97 2.32
634 635 1.551883 AGAAGGCATGGTCCAAAATGC 59.448 47.619 7.32 7.32 46.80 3.56
638 639 1.070038 GCATGGTCCAAAATGCAACG 58.930 50.000 10.49 0.00 46.75 4.10
639 640 1.336702 GCATGGTCCAAAATGCAACGA 60.337 47.619 10.49 0.00 46.75 3.85
640 641 2.865670 GCATGGTCCAAAATGCAACGAA 60.866 45.455 10.49 0.00 46.75 3.85
641 642 3.587923 CATGGTCCAAAATGCAACGAAT 58.412 40.909 0.00 0.00 0.00 3.34
642 643 4.742417 CATGGTCCAAAATGCAACGAATA 58.258 39.130 0.00 0.00 0.00 1.75
643 644 4.855715 TGGTCCAAAATGCAACGAATAA 57.144 36.364 0.00 0.00 0.00 1.40
644 645 4.551388 TGGTCCAAAATGCAACGAATAAC 58.449 39.130 0.00 0.00 0.00 1.89
645 646 3.924073 GGTCCAAAATGCAACGAATAACC 59.076 43.478 0.00 0.00 0.00 2.85
646 647 4.551388 GTCCAAAATGCAACGAATAACCA 58.449 39.130 0.00 0.00 0.00 3.67
647 648 4.621034 GTCCAAAATGCAACGAATAACCAG 59.379 41.667 0.00 0.00 0.00 4.00
648 649 4.520874 TCCAAAATGCAACGAATAACCAGA 59.479 37.500 0.00 0.00 0.00 3.86
650 651 5.516339 CCAAAATGCAACGAATAACCAGATC 59.484 40.000 0.00 0.00 0.00 2.75
651 652 6.324819 CAAAATGCAACGAATAACCAGATCT 58.675 36.000 0.00 0.00 0.00 2.75
652 653 5.490139 AATGCAACGAATAACCAGATCTG 57.510 39.130 16.24 16.24 0.00 2.90
653 654 3.937814 TGCAACGAATAACCAGATCTGT 58.062 40.909 21.11 6.52 0.00 3.41
655 656 3.932710 GCAACGAATAACCAGATCTGTGA 59.067 43.478 21.11 6.45 0.00 3.58
660 661 4.712476 GAATAACCAGATCTGTGATGGCT 58.288 43.478 21.11 0.64 37.64 4.75
662 663 3.398694 CCAGATCTGTGATGGCTGG 57.601 57.895 21.11 0.00 40.03 4.85
663 664 0.818445 CCAGATCTGTGATGGCTGGC 60.818 60.000 21.11 0.00 39.60 4.85
665 666 1.890979 GATCTGTGATGGCTGGCCG 60.891 63.158 7.14 0.00 39.42 6.13
666 667 2.315781 GATCTGTGATGGCTGGCCGA 62.316 60.000 7.14 0.00 39.42 5.54
667 668 2.599645 ATCTGTGATGGCTGGCCGAC 62.600 60.000 7.14 0.00 39.42 4.79
668 669 3.610619 CTGTGATGGCTGGCCGACA 62.611 63.158 5.58 5.58 39.42 4.35
669 670 2.359850 GTGATGGCTGGCCGACAA 60.360 61.111 7.22 0.00 39.42 3.18
670 671 2.359850 TGATGGCTGGCCGACAAC 60.360 61.111 7.22 5.58 39.42 3.32
673 674 3.965258 TGGCTGGCCGACAACCAT 61.965 61.111 7.14 0.00 40.33 3.55
674 675 3.443045 GGCTGGCCGACAACCATG 61.443 66.667 0.00 0.00 35.34 3.66
679 680 1.303317 GGCCGACAACCATGGTTCT 60.303 57.895 27.56 16.80 36.00 3.01
680 681 0.035820 GGCCGACAACCATGGTTCTA 60.036 55.000 27.56 0.00 36.00 2.10
681 682 1.408266 GGCCGACAACCATGGTTCTAT 60.408 52.381 27.56 15.63 36.00 1.98
682 683 1.670811 GCCGACAACCATGGTTCTATG 59.329 52.381 27.56 19.11 36.00 2.23
683 684 2.939640 GCCGACAACCATGGTTCTATGT 60.940 50.000 27.56 22.30 36.00 2.29
684 685 3.680475 GCCGACAACCATGGTTCTATGTA 60.680 47.826 27.56 0.00 36.00 2.29
685 686 3.869246 CCGACAACCATGGTTCTATGTAC 59.131 47.826 27.56 14.62 36.00 2.90
686 687 3.869246 CGACAACCATGGTTCTATGTACC 59.131 47.826 27.56 10.93 36.00 3.34
689 690 6.235231 ACAACCATGGTTCTATGTACCTAG 57.765 41.667 27.56 13.61 36.00 3.02
699 700 8.111545 TGGTTCTATGTACCTAGAAACTGTAGA 58.888 37.037 26.40 11.21 43.10 2.59
700 701 9.134055 GGTTCTATGTACCTAGAAACTGTAGAT 57.866 37.037 21.91 0.00 40.67 1.98
708 709 9.708092 GTACCTAGAAACTGTAGATGAGTTTTT 57.292 33.333 0.00 0.00 42.42 1.94
711 712 8.930760 CCTAGAAACTGTAGATGAGTTTTTCTG 58.069 37.037 0.00 0.00 42.42 3.02
712 713 9.482627 CTAGAAACTGTAGATGAGTTTTTCTGT 57.517 33.333 0.00 0.00 42.42 3.41
742 743 4.453819 GCCATGAGTATTGTAATCTCTGGC 59.546 45.833 17.80 17.80 40.85 4.85
814 1904 6.127980 GCCAGATATGATGATTGACTTCATGG 60.128 42.308 0.00 0.00 41.39 3.66
910 2009 5.257082 TCACGCAGCTATGTATCTTTACA 57.743 39.130 0.00 0.00 42.35 2.41
1048 2148 1.071471 CTTGCCTTCTCCACCACGT 59.929 57.895 0.00 0.00 0.00 4.49
1053 2153 0.393077 CCTTCTCCACCACGTTGTCT 59.607 55.000 0.00 0.00 0.00 3.41
1148 2248 0.473755 TTCTCCAGCACAGCTTTGGA 59.526 50.000 1.35 4.15 36.40 3.53
1195 2295 1.415672 TTTCACTTCCTCGGTGCCCT 61.416 55.000 0.00 0.00 34.97 5.19
2111 14572 7.500227 TGACAGGTTGATGAGATAATCCATTTC 59.500 37.037 0.00 0.00 0.00 2.17
2148 14622 9.559958 AATCTAGACGTTTTAATTGCATTTCAG 57.440 29.630 0.00 0.00 0.00 3.02
2191 14665 1.709760 CACCATGCACACGATCGAC 59.290 57.895 24.34 8.61 0.00 4.20
2240 14797 1.807573 GCTTGAAGCGTCCTCCTCG 60.808 63.158 0.00 0.00 0.00 4.63
2277 14844 2.693864 ACCATGCCTCCTCCCCTG 60.694 66.667 0.00 0.00 0.00 4.45
2456 15029 6.607970 TGAATATGAAATCTGGAATCAGCCT 58.392 36.000 0.00 0.00 40.69 4.58
2616 15633 1.686464 GGCGTCAAACTTTTGCTAGC 58.314 50.000 8.10 8.10 38.05 3.42
2617 15634 1.666023 GGCGTCAAACTTTTGCTAGCC 60.666 52.381 13.29 14.53 40.96 3.93
2618 15635 1.266989 GCGTCAAACTTTTGCTAGCCT 59.733 47.619 13.29 0.00 38.05 4.58
2619 15636 2.665794 GCGTCAAACTTTTGCTAGCCTC 60.666 50.000 13.29 0.00 38.05 4.70
2620 15637 2.095718 CGTCAAACTTTTGCTAGCCTCC 60.096 50.000 13.29 0.00 38.05 4.30
2623 15640 0.322546 AACTTTTGCTAGCCTCCCCG 60.323 55.000 13.29 0.00 0.00 5.73
2624 15641 2.045340 TTTTGCTAGCCTCCCCGC 60.045 61.111 13.29 0.00 0.00 6.13
2625 15642 2.819984 CTTTTGCTAGCCTCCCCGCA 62.820 60.000 13.29 0.00 0.00 5.69
2627 15644 2.419011 TTTGCTAGCCTCCCCGCAAA 62.419 55.000 13.29 1.08 46.42 3.68
2628 15645 2.045340 GCTAGCCTCCCCGCAAAA 60.045 61.111 2.29 0.00 0.00 2.44
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.866480 TCATCAATGAAAATTAGCTCCCAAC 58.134 36.000 0.00 0.00 33.08 3.77
3 4 7.105241 ACTTCATCAATGAAAATTAGCTCCC 57.895 36.000 6.85 0.00 45.26 4.30
7 8 9.113838 TCTCCTACTTCATCAATGAAAATTAGC 57.886 33.333 6.85 0.00 45.26 3.09
13 14 7.444183 ACGTTTTCTCCTACTTCATCAATGAAA 59.556 33.333 6.85 0.00 45.26 2.69
14 15 6.934645 ACGTTTTCTCCTACTTCATCAATGAA 59.065 34.615 5.38 5.38 43.94 2.57
16 17 6.368791 TGACGTTTTCTCCTACTTCATCAATG 59.631 38.462 0.00 0.00 0.00 2.82
17 18 6.464222 TGACGTTTTCTCCTACTTCATCAAT 58.536 36.000 0.00 0.00 0.00 2.57
18 19 5.849510 TGACGTTTTCTCCTACTTCATCAA 58.150 37.500 0.00 0.00 0.00 2.57
19 20 5.462530 TGACGTTTTCTCCTACTTCATCA 57.537 39.130 0.00 0.00 0.00 3.07
21 22 7.745620 ATTTTGACGTTTTCTCCTACTTCAT 57.254 32.000 0.00 0.00 0.00 2.57
22 23 7.066525 ACAATTTTGACGTTTTCTCCTACTTCA 59.933 33.333 0.00 0.00 0.00 3.02
23 24 7.415229 ACAATTTTGACGTTTTCTCCTACTTC 58.585 34.615 0.00 0.00 0.00 3.01
24 25 7.329588 ACAATTTTGACGTTTTCTCCTACTT 57.670 32.000 0.00 0.00 0.00 2.24
25 26 6.937436 ACAATTTTGACGTTTTCTCCTACT 57.063 33.333 0.00 0.00 0.00 2.57
26 27 7.858583 AGTACAATTTTGACGTTTTCTCCTAC 58.141 34.615 0.00 0.00 0.00 3.18
27 28 9.545105 TTAGTACAATTTTGACGTTTTCTCCTA 57.455 29.630 0.00 0.00 0.00 2.94
28 29 6.937436 AGTACAATTTTGACGTTTTCTCCT 57.063 33.333 0.00 0.00 0.00 3.69
29 30 9.673454 ATTTAGTACAATTTTGACGTTTTCTCC 57.327 29.630 0.00 0.00 0.00 3.71
36 37 9.659830 GTCTTTGATTTAGTACAATTTTGACGT 57.340 29.630 0.00 0.00 0.00 4.34
54 55 9.918630 CTTCATCCAAAAATAAGTGTCTTTGAT 57.081 29.630 0.00 0.00 31.77 2.57
55 56 9.130661 TCTTCATCCAAAAATAAGTGTCTTTGA 57.869 29.630 0.00 0.00 31.77 2.69
58 59 9.971922 CTTTCTTCATCCAAAAATAAGTGTCTT 57.028 29.630 0.00 0.00 0.00 3.01
59 60 9.136323 ACTTTCTTCATCCAAAAATAAGTGTCT 57.864 29.630 0.00 0.00 0.00 3.41
66 67 9.691362 GCTTTGTACTTTCTTCATCCAAAAATA 57.309 29.630 0.00 0.00 0.00 1.40
67 68 8.203485 TGCTTTGTACTTTCTTCATCCAAAAAT 58.797 29.630 0.00 0.00 0.00 1.82
68 69 7.551585 TGCTTTGTACTTTCTTCATCCAAAAA 58.448 30.769 0.00 0.00 0.00 1.94
69 70 7.106439 TGCTTTGTACTTTCTTCATCCAAAA 57.894 32.000 0.00 0.00 0.00 2.44
70 71 6.707440 TGCTTTGTACTTTCTTCATCCAAA 57.293 33.333 0.00 0.00 0.00 3.28
71 72 6.707440 TTGCTTTGTACTTTCTTCATCCAA 57.293 33.333 0.00 0.00 0.00 3.53
73 74 7.867403 TGATTTTGCTTTGTACTTTCTTCATCC 59.133 33.333 0.00 0.00 0.00 3.51
75 76 9.598517 TTTGATTTTGCTTTGTACTTTCTTCAT 57.401 25.926 0.00 0.00 0.00 2.57
76 77 8.994429 TTTGATTTTGCTTTGTACTTTCTTCA 57.006 26.923 0.00 0.00 0.00 3.02
77 78 9.906111 CTTTTGATTTTGCTTTGTACTTTCTTC 57.094 29.630 0.00 0.00 0.00 2.87
78 79 9.651913 TCTTTTGATTTTGCTTTGTACTTTCTT 57.348 25.926 0.00 0.00 0.00 2.52
79 80 9.651913 TTCTTTTGATTTTGCTTTGTACTTTCT 57.348 25.926 0.00 0.00 0.00 2.52
95 96 9.435688 GCCACATTAACCTATTTTCTTTTGATT 57.564 29.630 0.00 0.00 0.00 2.57
96 97 8.592809 TGCCACATTAACCTATTTTCTTTTGAT 58.407 29.630 0.00 0.00 0.00 2.57
97 98 7.957002 TGCCACATTAACCTATTTTCTTTTGA 58.043 30.769 0.00 0.00 0.00 2.69
98 99 8.087750 TCTGCCACATTAACCTATTTTCTTTTG 58.912 33.333 0.00 0.00 0.00 2.44
99 100 8.189119 TCTGCCACATTAACCTATTTTCTTTT 57.811 30.769 0.00 0.00 0.00 2.27
100 101 7.775053 TCTGCCACATTAACCTATTTTCTTT 57.225 32.000 0.00 0.00 0.00 2.52
101 102 7.775053 TTCTGCCACATTAACCTATTTTCTT 57.225 32.000 0.00 0.00 0.00 2.52
102 103 7.961326 ATTCTGCCACATTAACCTATTTTCT 57.039 32.000 0.00 0.00 0.00 2.52
105 106 9.297037 GGTATATTCTGCCACATTAACCTATTT 57.703 33.333 0.00 0.00 0.00 1.40
106 107 8.444783 TGGTATATTCTGCCACATTAACCTATT 58.555 33.333 0.00 0.00 34.26 1.73
107 108 7.984475 TGGTATATTCTGCCACATTAACCTAT 58.016 34.615 0.00 0.00 34.26 2.57
108 109 7.381789 TGGTATATTCTGCCACATTAACCTA 57.618 36.000 0.00 0.00 34.26 3.08
120 121 2.503920 ACGGACGTGGTATATTCTGC 57.496 50.000 0.00 0.00 0.00 4.26
121 122 3.918591 GCATACGGACGTGGTATATTCTG 59.081 47.826 7.73 0.00 0.00 3.02
122 123 3.570975 TGCATACGGACGTGGTATATTCT 59.429 43.478 7.73 0.00 0.00 2.40
123 124 3.904571 TGCATACGGACGTGGTATATTC 58.095 45.455 7.73 0.00 0.00 1.75
124 125 4.325028 TTGCATACGGACGTGGTATATT 57.675 40.909 7.73 0.00 0.00 1.28
125 126 4.242475 CATTGCATACGGACGTGGTATAT 58.758 43.478 7.73 0.00 0.00 0.86
126 127 3.553302 CCATTGCATACGGACGTGGTATA 60.553 47.826 7.73 0.00 0.00 1.47
127 128 2.479837 CATTGCATACGGACGTGGTAT 58.520 47.619 7.73 0.00 0.00 2.73
129 130 0.742990 CCATTGCATACGGACGTGGT 60.743 55.000 7.73 0.00 0.00 4.16
131 132 1.351707 GCCATTGCATACGGACGTG 59.648 57.895 7.73 0.00 37.47 4.49
132 133 1.078778 TGCCATTGCATACGGACGT 60.079 52.632 1.98 1.98 44.23 4.34
133 134 3.806651 TGCCATTGCATACGGACG 58.193 55.556 0.95 0.00 44.23 4.79
144 145 1.103398 GCTCCCGCTAATGTGCCATT 61.103 55.000 5.84 5.84 0.00 3.16
145 146 1.526917 GCTCCCGCTAATGTGCCAT 60.527 57.895 0.00 0.00 0.00 4.40
146 147 1.334384 TAGCTCCCGCTAATGTGCCA 61.334 55.000 0.00 0.00 46.79 4.92
169 170 1.913419 TGGTTAGACTCATCAACCCCC 59.087 52.381 3.01 0.00 40.87 5.40
170 171 3.199946 TGATGGTTAGACTCATCAACCCC 59.800 47.826 3.47 0.00 44.41 4.95
171 172 4.162320 TCTGATGGTTAGACTCATCAACCC 59.838 45.833 6.74 0.00 45.94 4.11
172 173 5.344743 TCTGATGGTTAGACTCATCAACC 57.655 43.478 6.74 3.08 45.94 3.77
173 174 4.808364 GCTCTGATGGTTAGACTCATCAAC 59.192 45.833 6.74 0.00 45.94 3.18
174 175 4.713814 AGCTCTGATGGTTAGACTCATCAA 59.286 41.667 6.74 0.04 45.94 2.57
175 176 4.285020 AGCTCTGATGGTTAGACTCATCA 58.715 43.478 5.48 5.48 44.95 3.07
176 177 4.935352 AGCTCTGATGGTTAGACTCATC 57.065 45.455 0.00 0.00 39.94 2.92
177 178 6.992664 ATTAGCTCTGATGGTTAGACTCAT 57.007 37.500 0.00 0.00 0.00 2.90
178 179 6.265649 GGTATTAGCTCTGATGGTTAGACTCA 59.734 42.308 0.00 0.00 0.00 3.41
179 180 6.492087 AGGTATTAGCTCTGATGGTTAGACTC 59.508 42.308 0.00 0.00 0.00 3.36
180 181 6.377912 AGGTATTAGCTCTGATGGTTAGACT 58.622 40.000 0.00 0.00 0.00 3.24
181 182 6.658188 AGGTATTAGCTCTGATGGTTAGAC 57.342 41.667 0.00 0.00 0.00 2.59
182 183 7.069986 AGAAGGTATTAGCTCTGATGGTTAGA 58.930 38.462 0.00 0.00 0.00 2.10
183 184 7.232534 AGAGAAGGTATTAGCTCTGATGGTTAG 59.767 40.741 0.00 0.00 36.44 2.34
184 185 7.069986 AGAGAAGGTATTAGCTCTGATGGTTA 58.930 38.462 0.00 0.00 36.44 2.85
185 186 5.902431 AGAGAAGGTATTAGCTCTGATGGTT 59.098 40.000 0.00 0.00 36.44 3.67
186 187 5.463154 AGAGAAGGTATTAGCTCTGATGGT 58.537 41.667 0.00 0.00 36.44 3.55
187 188 6.350110 GCTAGAGAAGGTATTAGCTCTGATGG 60.350 46.154 0.00 0.00 38.15 3.51
188 189 6.208402 TGCTAGAGAAGGTATTAGCTCTGATG 59.792 42.308 0.00 0.00 39.33 3.07
189 190 6.310941 TGCTAGAGAAGGTATTAGCTCTGAT 58.689 40.000 0.00 0.00 39.33 2.90
190 191 5.696030 TGCTAGAGAAGGTATTAGCTCTGA 58.304 41.667 0.00 0.00 39.33 3.27
191 192 6.588719 ATGCTAGAGAAGGTATTAGCTCTG 57.411 41.667 0.00 0.00 39.33 3.35
192 193 8.112822 TGATATGCTAGAGAAGGTATTAGCTCT 58.887 37.037 0.00 0.00 39.33 4.09
193 194 8.188139 GTGATATGCTAGAGAAGGTATTAGCTC 58.812 40.741 0.00 0.00 39.33 4.09
194 195 7.893302 AGTGATATGCTAGAGAAGGTATTAGCT 59.107 37.037 0.00 0.00 39.33 3.32
195 196 8.062065 AGTGATATGCTAGAGAAGGTATTAGC 57.938 38.462 0.00 0.00 39.11 3.09
200 201 9.422681 AGTTTAAGTGATATGCTAGAGAAGGTA 57.577 33.333 0.00 0.00 0.00 3.08
201 202 8.312669 AGTTTAAGTGATATGCTAGAGAAGGT 57.687 34.615 0.00 0.00 0.00 3.50
214 215 9.816787 AGGTTTGGGAATTAAGTTTAAGTGATA 57.183 29.630 0.00 0.00 0.00 2.15
215 216 8.721133 AGGTTTGGGAATTAAGTTTAAGTGAT 57.279 30.769 0.00 0.00 0.00 3.06
216 217 8.541899 AAGGTTTGGGAATTAAGTTTAAGTGA 57.458 30.769 0.00 0.00 0.00 3.41
218 219 8.777578 AGAAGGTTTGGGAATTAAGTTTAAGT 57.222 30.769 0.00 0.00 0.00 2.24
219 220 8.304596 GGAGAAGGTTTGGGAATTAAGTTTAAG 58.695 37.037 0.00 0.00 0.00 1.85
220 221 7.233962 GGGAGAAGGTTTGGGAATTAAGTTTAA 59.766 37.037 0.00 0.00 0.00 1.52
221 222 6.722590 GGGAGAAGGTTTGGGAATTAAGTTTA 59.277 38.462 0.00 0.00 0.00 2.01
222 223 5.542635 GGGAGAAGGTTTGGGAATTAAGTTT 59.457 40.000 0.00 0.00 0.00 2.66
223 224 5.084519 GGGAGAAGGTTTGGGAATTAAGTT 58.915 41.667 0.00 0.00 0.00 2.66
224 225 4.357097 AGGGAGAAGGTTTGGGAATTAAGT 59.643 41.667 0.00 0.00 0.00 2.24
226 227 6.354477 GGATAGGGAGAAGGTTTGGGAATTAA 60.354 42.308 0.00 0.00 0.00 1.40
227 228 5.133830 GGATAGGGAGAAGGTTTGGGAATTA 59.866 44.000 0.00 0.00 0.00 1.40
228 229 4.079154 GGATAGGGAGAAGGTTTGGGAATT 60.079 45.833 0.00 0.00 0.00 2.17
229 230 3.463704 GGATAGGGAGAAGGTTTGGGAAT 59.536 47.826 0.00 0.00 0.00 3.01
231 232 2.488836 GGATAGGGAGAAGGTTTGGGA 58.511 52.381 0.00 0.00 0.00 4.37
233 234 1.495148 GGGGATAGGGAGAAGGTTTGG 59.505 57.143 0.00 0.00 0.00 3.28
234 235 2.205342 TGGGGATAGGGAGAAGGTTTG 58.795 52.381 0.00 0.00 0.00 2.93
235 236 2.680439 TGGGGATAGGGAGAAGGTTT 57.320 50.000 0.00 0.00 0.00 3.27
236 237 2.680439 TTGGGGATAGGGAGAAGGTT 57.320 50.000 0.00 0.00 0.00 3.50
237 238 2.680439 TTTGGGGATAGGGAGAAGGT 57.320 50.000 0.00 0.00 0.00 3.50
239 240 5.129368 TGAATTTTGGGGATAGGGAGAAG 57.871 43.478 0.00 0.00 0.00 2.85
240 241 5.544441 TTGAATTTTGGGGATAGGGAGAA 57.456 39.130 0.00 0.00 0.00 2.87
241 242 5.749422 ATTGAATTTTGGGGATAGGGAGA 57.251 39.130 0.00 0.00 0.00 3.71
242 243 8.496534 AATTATTGAATTTTGGGGATAGGGAG 57.503 34.615 0.00 0.00 30.77 4.30
266 267 7.926018 GCTGAGAAAAAGTTTAATCCCTCAAAA 59.074 33.333 0.00 0.00 0.00 2.44
267 268 7.287696 AGCTGAGAAAAAGTTTAATCCCTCAAA 59.712 33.333 0.00 0.00 0.00 2.69
268 269 6.777580 AGCTGAGAAAAAGTTTAATCCCTCAA 59.222 34.615 0.00 0.00 0.00 3.02
269 270 6.306987 AGCTGAGAAAAAGTTTAATCCCTCA 58.693 36.000 0.00 0.00 0.00 3.86
270 271 6.825944 AGCTGAGAAAAAGTTTAATCCCTC 57.174 37.500 0.00 0.00 0.00 4.30
271 272 6.375736 GCTAGCTGAGAAAAAGTTTAATCCCT 59.624 38.462 7.70 0.00 0.00 4.20
272 273 6.151144 TGCTAGCTGAGAAAAAGTTTAATCCC 59.849 38.462 17.23 0.00 0.00 3.85
276 277 7.119846 GGATCTGCTAGCTGAGAAAAAGTTTAA 59.880 37.037 25.68 2.41 0.00 1.52
277 278 6.595716 GGATCTGCTAGCTGAGAAAAAGTTTA 59.404 38.462 25.68 2.60 0.00 2.01
278 279 5.414144 GGATCTGCTAGCTGAGAAAAAGTTT 59.586 40.000 25.68 8.96 0.00 2.66
279 280 4.940654 GGATCTGCTAGCTGAGAAAAAGTT 59.059 41.667 25.68 9.62 0.00 2.66
280 281 4.512484 GGATCTGCTAGCTGAGAAAAAGT 58.488 43.478 25.68 10.29 0.00 2.66
281 282 3.876320 GGGATCTGCTAGCTGAGAAAAAG 59.124 47.826 25.68 8.98 0.00 2.27
282 283 3.370953 GGGGATCTGCTAGCTGAGAAAAA 60.371 47.826 25.68 5.77 0.00 1.94
283 284 2.171448 GGGGATCTGCTAGCTGAGAAAA 59.829 50.000 25.68 6.45 0.00 2.29
284 285 1.765314 GGGGATCTGCTAGCTGAGAAA 59.235 52.381 25.68 6.80 0.00 2.52
285 286 1.062581 AGGGGATCTGCTAGCTGAGAA 60.063 52.381 25.68 7.14 0.00 2.87
286 287 0.560193 AGGGGATCTGCTAGCTGAGA 59.440 55.000 25.68 17.12 0.00 3.27
287 288 2.300956 TAGGGGATCTGCTAGCTGAG 57.699 55.000 25.68 12.45 0.00 3.35
288 289 2.700897 GTTTAGGGGATCTGCTAGCTGA 59.299 50.000 24.30 24.30 0.00 4.26
289 290 2.703007 AGTTTAGGGGATCTGCTAGCTG 59.297 50.000 17.23 16.05 0.00 4.24
291 292 3.847671 AAGTTTAGGGGATCTGCTAGC 57.152 47.619 8.10 8.10 0.00 3.42
293 294 5.309806 GGGATTAAGTTTAGGGGATCTGCTA 59.690 44.000 0.00 0.00 0.00 3.49
294 295 4.104897 GGGATTAAGTTTAGGGGATCTGCT 59.895 45.833 0.00 0.00 0.00 4.24
296 297 5.369699 TGAGGGATTAAGTTTAGGGGATCTG 59.630 44.000 0.00 0.00 0.00 2.90
297 298 5.548573 TGAGGGATTAAGTTTAGGGGATCT 58.451 41.667 0.00 0.00 0.00 2.75
299 300 6.432581 GTTTGAGGGATTAAGTTTAGGGGAT 58.567 40.000 0.00 0.00 0.00 3.85
300 301 5.281349 GGTTTGAGGGATTAAGTTTAGGGGA 60.281 44.000 0.00 0.00 0.00 4.81
302 303 5.576128 TGGTTTGAGGGATTAAGTTTAGGG 58.424 41.667 0.00 0.00 0.00 3.53
304 305 6.428771 TCGTTGGTTTGAGGGATTAAGTTTAG 59.571 38.462 0.00 0.00 0.00 1.85
305 306 6.205270 GTCGTTGGTTTGAGGGATTAAGTTTA 59.795 38.462 0.00 0.00 0.00 2.01
306 307 5.009310 GTCGTTGGTTTGAGGGATTAAGTTT 59.991 40.000 0.00 0.00 0.00 2.66
307 308 4.517832 GTCGTTGGTTTGAGGGATTAAGTT 59.482 41.667 0.00 0.00 0.00 2.66
309 310 3.439129 GGTCGTTGGTTTGAGGGATTAAG 59.561 47.826 0.00 0.00 0.00 1.85
310 311 3.414269 GGTCGTTGGTTTGAGGGATTAA 58.586 45.455 0.00 0.00 0.00 1.40
311 312 2.290450 GGGTCGTTGGTTTGAGGGATTA 60.290 50.000 0.00 0.00 0.00 1.75
313 314 0.037734 GGGTCGTTGGTTTGAGGGAT 59.962 55.000 0.00 0.00 0.00 3.85
314 315 1.452801 GGGTCGTTGGTTTGAGGGA 59.547 57.895 0.00 0.00 0.00 4.20
315 316 1.602605 GGGGTCGTTGGTTTGAGGG 60.603 63.158 0.00 0.00 0.00 4.30
316 317 1.149627 TGGGGTCGTTGGTTTGAGG 59.850 57.895 0.00 0.00 0.00 3.86
317 318 0.464735 TGTGGGGTCGTTGGTTTGAG 60.465 55.000 0.00 0.00 0.00 3.02
319 320 0.313672 CATGTGGGGTCGTTGGTTTG 59.686 55.000 0.00 0.00 0.00 2.93
320 321 0.825840 CCATGTGGGGTCGTTGGTTT 60.826 55.000 0.00 0.00 0.00 3.27
321 322 1.228429 CCATGTGGGGTCGTTGGTT 60.228 57.895 0.00 0.00 0.00 3.67
322 323 1.710996 TTCCATGTGGGGTCGTTGGT 61.711 55.000 0.00 0.00 37.22 3.67
323 324 0.538516 TTTCCATGTGGGGTCGTTGG 60.539 55.000 0.00 0.00 37.22 3.77
324 325 0.596082 GTTTCCATGTGGGGTCGTTG 59.404 55.000 0.00 0.00 37.22 4.10
325 326 0.538746 GGTTTCCATGTGGGGTCGTT 60.539 55.000 0.00 0.00 37.22 3.85
326 327 1.074248 GGTTTCCATGTGGGGTCGT 59.926 57.895 0.00 0.00 37.22 4.34
327 328 0.676782 GAGGTTTCCATGTGGGGTCG 60.677 60.000 0.00 0.00 37.22 4.79
328 329 0.698818 AGAGGTTTCCATGTGGGGTC 59.301 55.000 0.00 0.00 37.22 4.46
329 330 0.698818 GAGAGGTTTCCATGTGGGGT 59.301 55.000 0.00 0.00 37.22 4.95
330 331 0.698238 TGAGAGGTTTCCATGTGGGG 59.302 55.000 0.00 0.00 37.22 4.96
331 332 2.025981 TGATGAGAGGTTTCCATGTGGG 60.026 50.000 0.00 0.00 35.41 4.61
332 333 3.354948 TGATGAGAGGTTTCCATGTGG 57.645 47.619 0.00 0.00 0.00 4.17
333 334 4.575236 CAGATGATGAGAGGTTTCCATGTG 59.425 45.833 0.00 0.00 0.00 3.21
334 335 4.226846 ACAGATGATGAGAGGTTTCCATGT 59.773 41.667 0.00 0.00 0.00 3.21
335 336 4.778579 ACAGATGATGAGAGGTTTCCATG 58.221 43.478 0.00 0.00 0.00 3.66
336 337 4.720773 AGACAGATGATGAGAGGTTTCCAT 59.279 41.667 0.00 0.00 0.00 3.41
337 338 4.099633 AGACAGATGATGAGAGGTTTCCA 58.900 43.478 0.00 0.00 0.00 3.53
338 339 4.751767 AGACAGATGATGAGAGGTTTCC 57.248 45.455 0.00 0.00 0.00 3.13
342 343 3.992999 AGGAAGACAGATGATGAGAGGT 58.007 45.455 0.00 0.00 0.00 3.85
343 344 4.650588 AGAAGGAAGACAGATGATGAGAGG 59.349 45.833 0.00 0.00 0.00 3.69
344 345 5.857471 AGAAGGAAGACAGATGATGAGAG 57.143 43.478 0.00 0.00 0.00 3.20
346 347 5.129155 AGGAAGAAGGAAGACAGATGATGAG 59.871 44.000 0.00 0.00 0.00 2.90
347 348 5.028802 AGGAAGAAGGAAGACAGATGATGA 58.971 41.667 0.00 0.00 0.00 2.92
348 349 5.356291 AGGAAGAAGGAAGACAGATGATG 57.644 43.478 0.00 0.00 0.00 3.07
349 350 6.385766 AAAGGAAGAAGGAAGACAGATGAT 57.614 37.500 0.00 0.00 0.00 2.45
350 351 5.832539 AAAGGAAGAAGGAAGACAGATGA 57.167 39.130 0.00 0.00 0.00 2.92
351 352 6.072230 GGAAAAAGGAAGAAGGAAGACAGATG 60.072 42.308 0.00 0.00 0.00 2.90
352 353 6.007076 GGAAAAAGGAAGAAGGAAGACAGAT 58.993 40.000 0.00 0.00 0.00 2.90
353 354 5.132816 AGGAAAAAGGAAGAAGGAAGACAGA 59.867 40.000 0.00 0.00 0.00 3.41
354 355 5.380900 AGGAAAAAGGAAGAAGGAAGACAG 58.619 41.667 0.00 0.00 0.00 3.51
355 356 5.388599 AGGAAAAAGGAAGAAGGAAGACA 57.611 39.130 0.00 0.00 0.00 3.41
357 358 6.267492 AGAAGGAAAAAGGAAGAAGGAAGA 57.733 37.500 0.00 0.00 0.00 2.87
358 359 6.775142 AGAAGAAGGAAAAAGGAAGAAGGAAG 59.225 38.462 0.00 0.00 0.00 3.46
359 360 6.673583 AGAAGAAGGAAAAAGGAAGAAGGAA 58.326 36.000 0.00 0.00 0.00 3.36
360 361 6.267492 AGAAGAAGGAAAAAGGAAGAAGGA 57.733 37.500 0.00 0.00 0.00 3.36
361 362 6.968263 AAGAAGAAGGAAAAAGGAAGAAGG 57.032 37.500 0.00 0.00 0.00 3.46
362 363 8.231692 AGAAAGAAGAAGGAAAAAGGAAGAAG 57.768 34.615 0.00 0.00 0.00 2.85
364 365 8.055790 AGAAGAAAGAAGAAGGAAAAAGGAAGA 58.944 33.333 0.00 0.00 0.00 2.87
365 366 8.231692 AGAAGAAAGAAGAAGGAAAAAGGAAG 57.768 34.615 0.00 0.00 0.00 3.46
366 367 8.595362 AAGAAGAAAGAAGAAGGAAAAAGGAA 57.405 30.769 0.00 0.00 0.00 3.36
367 368 7.285629 GGAAGAAGAAAGAAGAAGGAAAAAGGA 59.714 37.037 0.00 0.00 0.00 3.36
368 369 7.286546 AGGAAGAAGAAAGAAGAAGGAAAAAGG 59.713 37.037 0.00 0.00 0.00 3.11
369 370 8.231692 AGGAAGAAGAAAGAAGAAGGAAAAAG 57.768 34.615 0.00 0.00 0.00 2.27
370 371 8.470002 CAAGGAAGAAGAAAGAAGAAGGAAAAA 58.530 33.333 0.00 0.00 0.00 1.94
371 372 7.416777 GCAAGGAAGAAGAAAGAAGAAGGAAAA 60.417 37.037 0.00 0.00 0.00 2.29
372 373 6.039829 GCAAGGAAGAAGAAAGAAGAAGGAAA 59.960 38.462 0.00 0.00 0.00 3.13
373 374 5.532779 GCAAGGAAGAAGAAAGAAGAAGGAA 59.467 40.000 0.00 0.00 0.00 3.36
374 375 5.066593 GCAAGGAAGAAGAAAGAAGAAGGA 58.933 41.667 0.00 0.00 0.00 3.36
375 376 4.823989 TGCAAGGAAGAAGAAAGAAGAAGG 59.176 41.667 0.00 0.00 0.00 3.46
376 377 5.297776 TGTGCAAGGAAGAAGAAAGAAGAAG 59.702 40.000 0.00 0.00 0.00 2.85
378 379 4.576463 GTGTGCAAGGAAGAAGAAAGAAGA 59.424 41.667 0.00 0.00 0.00 2.87
379 380 4.553547 CGTGTGCAAGGAAGAAGAAAGAAG 60.554 45.833 0.00 0.00 0.00 2.85
380 381 3.312421 CGTGTGCAAGGAAGAAGAAAGAA 59.688 43.478 0.00 0.00 0.00 2.52
381 382 2.872245 CGTGTGCAAGGAAGAAGAAAGA 59.128 45.455 0.00 0.00 0.00 2.52
382 383 2.031682 CCGTGTGCAAGGAAGAAGAAAG 60.032 50.000 0.00 0.00 31.21 2.62
383 384 1.946768 CCGTGTGCAAGGAAGAAGAAA 59.053 47.619 0.00 0.00 31.21 2.52
384 385 1.140052 TCCGTGTGCAAGGAAGAAGAA 59.860 47.619 4.43 0.00 36.05 2.52
386 387 0.868406 GTCCGTGTGCAAGGAAGAAG 59.132 55.000 8.34 0.00 40.54 2.85
387 388 0.179234 TGTCCGTGTGCAAGGAAGAA 59.821 50.000 8.34 0.00 40.54 2.52
388 389 0.179234 TTGTCCGTGTGCAAGGAAGA 59.821 50.000 8.34 0.00 40.54 2.87
389 390 0.307760 GTTGTCCGTGTGCAAGGAAG 59.692 55.000 8.34 0.00 40.54 3.46
390 391 0.393132 TGTTGTCCGTGTGCAAGGAA 60.393 50.000 8.34 0.00 40.54 3.36
391 392 0.393132 TTGTTGTCCGTGTGCAAGGA 60.393 50.000 2.80 2.80 36.63 3.36
392 393 0.248458 GTTGTTGTCCGTGTGCAAGG 60.248 55.000 0.00 0.00 0.00 3.61
393 394 0.588730 CGTTGTTGTCCGTGTGCAAG 60.589 55.000 0.00 0.00 0.00 4.01
395 396 0.812014 ATCGTTGTTGTCCGTGTGCA 60.812 50.000 0.00 0.00 0.00 4.57
396 397 0.306533 AATCGTTGTTGTCCGTGTGC 59.693 50.000 0.00 0.00 0.00 4.57
397 398 1.919839 GCAATCGTTGTTGTCCGTGTG 60.920 52.381 0.87 0.00 0.00 3.82
398 399 0.306533 GCAATCGTTGTTGTCCGTGT 59.693 50.000 0.87 0.00 0.00 4.49
399 400 0.586319 AGCAATCGTTGTTGTCCGTG 59.414 50.000 0.00 0.00 0.00 4.94
400 401 0.865769 GAGCAATCGTTGTTGTCCGT 59.134 50.000 0.00 0.00 0.00 4.69
401 402 0.165944 GGAGCAATCGTTGTTGTCCG 59.834 55.000 0.00 0.00 0.00 4.79
402 403 0.165944 CGGAGCAATCGTTGTTGTCC 59.834 55.000 0.00 0.00 0.00 4.02
403 404 3.657537 CGGAGCAATCGTTGTTGTC 57.342 52.632 0.00 0.00 0.00 3.18
417 418 0.671251 GGACATCCTCTAGTGCGGAG 59.329 60.000 0.00 0.00 29.72 4.63
418 419 0.033503 TGGACATCCTCTAGTGCGGA 60.034 55.000 0.00 0.00 36.82 5.54
419 420 1.043816 ATGGACATCCTCTAGTGCGG 58.956 55.000 0.00 0.00 36.82 5.69
420 421 1.683385 TCATGGACATCCTCTAGTGCG 59.317 52.381 0.00 0.00 36.82 5.34
422 423 2.964464 AGCTCATGGACATCCTCTAGTG 59.036 50.000 0.00 0.00 36.82 2.74
423 424 3.326946 AGCTCATGGACATCCTCTAGT 57.673 47.619 0.00 0.00 36.82 2.57
424 425 3.193267 GCTAGCTCATGGACATCCTCTAG 59.807 52.174 7.70 4.15 36.82 2.43
425 426 3.161067 GCTAGCTCATGGACATCCTCTA 58.839 50.000 7.70 0.00 36.82 2.43
426 427 1.969923 GCTAGCTCATGGACATCCTCT 59.030 52.381 7.70 0.00 36.82 3.69
428 429 2.100128 AGCTAGCTCATGGACATCCT 57.900 50.000 12.68 0.00 36.82 3.24
429 430 2.233431 CCTAGCTAGCTCATGGACATCC 59.767 54.545 23.26 0.00 0.00 3.51
430 431 2.896685 ACCTAGCTAGCTCATGGACATC 59.103 50.000 27.50 0.00 0.00 3.06
431 432 2.896685 GACCTAGCTAGCTCATGGACAT 59.103 50.000 27.50 12.85 0.00 3.06
432 433 2.311463 GACCTAGCTAGCTCATGGACA 58.689 52.381 27.50 9.13 0.00 4.02
433 434 1.616374 GGACCTAGCTAGCTCATGGAC 59.384 57.143 27.50 22.74 0.00 4.02
434 435 1.501170 AGGACCTAGCTAGCTCATGGA 59.499 52.381 27.50 10.40 0.00 3.41
435 436 2.008242 AGGACCTAGCTAGCTCATGG 57.992 55.000 23.26 22.59 0.00 3.66
436 437 3.509575 CCTTAGGACCTAGCTAGCTCATG 59.490 52.174 23.26 13.27 0.00 3.07
437 438 3.141272 ACCTTAGGACCTAGCTAGCTCAT 59.859 47.826 23.26 11.60 0.00 2.90
438 439 2.514582 ACCTTAGGACCTAGCTAGCTCA 59.485 50.000 23.26 7.11 0.00 4.26
439 440 3.232720 ACCTTAGGACCTAGCTAGCTC 57.767 52.381 23.26 11.29 0.00 4.09
441 442 3.297736 TCAACCTTAGGACCTAGCTAGC 58.702 50.000 15.74 6.62 0.00 3.42
442 443 5.202004 TCTTCAACCTTAGGACCTAGCTAG 58.798 45.833 14.20 14.20 0.00 3.42
445 446 4.202274 GGATCTTCAACCTTAGGACCTAGC 60.202 50.000 4.77 0.00 0.00 3.42
446 447 4.962995 TGGATCTTCAACCTTAGGACCTAG 59.037 45.833 4.77 0.00 0.00 3.02
447 448 4.715297 GTGGATCTTCAACCTTAGGACCTA 59.285 45.833 4.77 0.00 0.00 3.08
448 449 3.519913 GTGGATCTTCAACCTTAGGACCT 59.480 47.826 4.77 0.00 0.00 3.85
449 450 3.263425 TGTGGATCTTCAACCTTAGGACC 59.737 47.826 4.77 0.00 0.00 4.46
451 452 5.576563 TTTGTGGATCTTCAACCTTAGGA 57.423 39.130 4.77 0.00 0.00 2.94
452 453 5.770162 ACTTTTGTGGATCTTCAACCTTAGG 59.230 40.000 0.00 0.00 0.00 2.69
453 454 6.884280 ACTTTTGTGGATCTTCAACCTTAG 57.116 37.500 0.00 0.00 0.00 2.18
454 455 8.934023 ATTACTTTTGTGGATCTTCAACCTTA 57.066 30.769 0.00 0.00 0.00 2.69
457 458 8.141268 TCAAATTACTTTTGTGGATCTTCAACC 58.859 33.333 0.00 0.00 44.25 3.77
458 459 9.696917 ATCAAATTACTTTTGTGGATCTTCAAC 57.303 29.630 0.00 0.00 44.25 3.18
463 464 9.965902 ACTCTATCAAATTACTTTTGTGGATCT 57.034 29.630 0.00 0.00 44.25 2.75
466 467 7.148474 GCGACTCTATCAAATTACTTTTGTGGA 60.148 37.037 0.00 0.00 44.25 4.02
467 468 6.961554 GCGACTCTATCAAATTACTTTTGTGG 59.038 38.462 0.00 0.00 44.25 4.17
468 469 7.518161 TGCGACTCTATCAAATTACTTTTGTG 58.482 34.615 0.00 0.00 44.25 3.33
469 470 7.667043 TGCGACTCTATCAAATTACTTTTGT 57.333 32.000 0.00 0.00 44.25 2.83
470 471 9.003112 CATTGCGACTCTATCAAATTACTTTTG 57.997 33.333 0.00 0.00 45.08 2.44
471 472 8.946085 TCATTGCGACTCTATCAAATTACTTTT 58.054 29.630 0.00 0.00 0.00 2.27
472 473 8.492673 TCATTGCGACTCTATCAAATTACTTT 57.507 30.769 0.00 0.00 0.00 2.66
475 476 6.073548 CCCTCATTGCGACTCTATCAAATTAC 60.074 42.308 0.00 0.00 0.00 1.89
476 477 5.991606 CCCTCATTGCGACTCTATCAAATTA 59.008 40.000 0.00 0.00 0.00 1.40
477 478 4.818546 CCCTCATTGCGACTCTATCAAATT 59.181 41.667 0.00 0.00 0.00 1.82
478 479 4.384056 CCCTCATTGCGACTCTATCAAAT 58.616 43.478 0.00 0.00 0.00 2.32
481 482 1.069204 GCCCTCATTGCGACTCTATCA 59.931 52.381 0.00 0.00 0.00 2.15
483 484 3.997672 GCCCTCATTGCGACTCTAT 57.002 52.632 0.00 0.00 0.00 1.98
491 492 1.447140 TGTACGTCGCCCTCATTGC 60.447 57.895 0.00 0.00 0.00 3.56
492 493 1.410737 CGTGTACGTCGCCCTCATTG 61.411 60.000 0.00 0.00 34.11 2.82
493 494 1.153901 CGTGTACGTCGCCCTCATT 60.154 57.895 0.00 0.00 34.11 2.57
494 495 2.488355 CGTGTACGTCGCCCTCAT 59.512 61.111 0.00 0.00 34.11 2.90
504 505 0.935831 TCCTTCGTTGCACGTGTACG 60.936 55.000 27.84 27.84 43.14 3.67
505 506 0.782384 CTCCTTCGTTGCACGTGTAC 59.218 55.000 18.38 14.31 43.14 2.90
506 507 0.386476 ACTCCTTCGTTGCACGTGTA 59.614 50.000 18.38 10.46 43.14 2.90
509 510 1.660575 CGACTCCTTCGTTGCACGT 60.661 57.895 8.22 0.00 43.24 4.49
510 511 3.147294 CGACTCCTTCGTTGCACG 58.853 61.111 0.00 0.00 43.24 5.34
519 520 0.810016 GCCTACGTTCTCGACTCCTT 59.190 55.000 0.00 0.00 40.62 3.36
521 522 1.062206 CGCCTACGTTCTCGACTCC 59.938 63.158 0.00 0.00 40.62 3.85
523 524 0.957395 TTCCGCCTACGTTCTCGACT 60.957 55.000 0.00 0.00 40.62 4.18
525 526 0.813184 AATTCCGCCTACGTTCTCGA 59.187 50.000 0.00 0.00 40.62 4.04
526 527 1.197910 GAATTCCGCCTACGTTCTCG 58.802 55.000 0.00 0.00 43.34 4.04
528 529 1.405121 GGTGAATTCCGCCTACGTTCT 60.405 52.381 2.27 0.00 42.19 3.01
529 530 1.004595 GGTGAATTCCGCCTACGTTC 58.995 55.000 2.27 0.00 42.19 3.95
531 532 4.926207 GGTGAATTCCGCCTACGT 57.074 55.556 2.27 0.00 42.19 3.57
540 541 0.608035 TGCCCGTGGAAGGTGAATTC 60.608 55.000 0.00 0.00 0.00 2.17
541 542 0.178975 TTGCCCGTGGAAGGTGAATT 60.179 50.000 0.00 0.00 0.00 2.17
542 543 0.893727 GTTGCCCGTGGAAGGTGAAT 60.894 55.000 0.00 0.00 0.00 2.57
543 544 1.527380 GTTGCCCGTGGAAGGTGAA 60.527 57.895 0.00 0.00 0.00 3.18
544 545 2.112297 GTTGCCCGTGGAAGGTGA 59.888 61.111 0.00 0.00 0.00 4.02
545 546 3.353836 CGTTGCCCGTGGAAGGTG 61.354 66.667 0.00 0.00 0.00 4.00
546 547 4.636435 CCGTTGCCCGTGGAAGGT 62.636 66.667 0.00 0.00 33.66 3.50
547 548 4.636435 ACCGTTGCCCGTGGAAGG 62.636 66.667 0.00 0.00 33.66 3.46
548 549 2.190841 AAACCGTTGCCCGTGGAAG 61.191 57.895 0.00 0.00 33.66 3.46
550 551 2.902846 CAAACCGTTGCCCGTGGA 60.903 61.111 0.00 0.00 33.66 4.02
551 552 2.902846 TCAAACCGTTGCCCGTGG 60.903 61.111 0.00 0.00 34.50 4.94
552 553 2.637025 CTCAAACCGTTGCCCGTG 59.363 61.111 0.00 0.00 34.50 4.94
553 554 3.284449 GCTCAAACCGTTGCCCGT 61.284 61.111 0.00 0.00 34.50 5.28
554 555 3.283684 TGCTCAAACCGTTGCCCG 61.284 61.111 0.00 0.00 34.50 6.13
555 556 1.734388 AAGTGCTCAAACCGTTGCCC 61.734 55.000 0.00 0.00 34.50 5.36
556 557 0.317854 GAAGTGCTCAAACCGTTGCC 60.318 55.000 0.00 0.00 34.50 4.52
558 559 2.599848 CGAAGAAGTGCTCAAACCGTTG 60.600 50.000 0.00 0.00 35.95 4.10
559 560 1.597663 CGAAGAAGTGCTCAAACCGTT 59.402 47.619 0.00 0.00 0.00 4.44
560 561 1.217882 CGAAGAAGTGCTCAAACCGT 58.782 50.000 0.00 0.00 0.00 4.83
561 562 1.070577 CACGAAGAAGTGCTCAAACCG 60.071 52.381 0.00 0.00 35.17 4.44
562 563 1.940613 ACACGAAGAAGTGCTCAAACC 59.059 47.619 0.00 0.00 45.45 3.27
564 565 2.899976 TCACACGAAGAAGTGCTCAAA 58.100 42.857 0.00 0.00 45.45 2.69
565 566 2.595124 TCACACGAAGAAGTGCTCAA 57.405 45.000 0.00 0.00 45.45 3.02
566 567 2.595124 TTCACACGAAGAAGTGCTCA 57.405 45.000 0.00 0.00 45.45 4.26
567 568 3.059884 TCATTCACACGAAGAAGTGCTC 58.940 45.455 0.00 0.00 45.45 4.26
568 569 3.062763 CTCATTCACACGAAGAAGTGCT 58.937 45.455 0.00 0.00 45.45 4.40
569 570 2.802816 ACTCATTCACACGAAGAAGTGC 59.197 45.455 0.00 0.00 45.45 4.40
570 571 4.747108 AGAACTCATTCACACGAAGAAGTG 59.253 41.667 0.00 0.00 39.02 3.16
571 572 4.950050 AGAACTCATTCACACGAAGAAGT 58.050 39.130 0.00 0.00 37.29 3.01
572 573 5.694006 AGAAGAACTCATTCACACGAAGAAG 59.306 40.000 0.00 0.00 37.29 2.85
574 575 5.201713 AGAAGAACTCATTCACACGAAGA 57.798 39.130 0.00 0.00 37.29 2.87
576 577 4.039245 AGGAGAAGAACTCATTCACACGAA 59.961 41.667 0.00 0.00 46.54 3.85
577 578 3.574396 AGGAGAAGAACTCATTCACACGA 59.426 43.478 0.00 0.00 46.54 4.35
578 579 3.919216 AGGAGAAGAACTCATTCACACG 58.081 45.455 0.00 0.00 46.54 4.49
579 580 5.146010 AGAGGAGAAGAACTCATTCACAC 57.854 43.478 0.00 0.00 46.54 3.82
582 583 5.186797 GGAGAAGAGGAGAAGAACTCATTCA 59.813 44.000 0.00 0.00 46.54 2.57
583 584 5.422012 AGGAGAAGAGGAGAAGAACTCATTC 59.578 44.000 0.00 0.00 46.54 2.67
585 586 4.946646 AGGAGAAGAGGAGAAGAACTCAT 58.053 43.478 0.00 0.00 46.54 2.90
586 587 4.396357 AGGAGAAGAGGAGAAGAACTCA 57.604 45.455 0.00 0.00 46.54 3.41
587 588 5.357032 CACTAGGAGAAGAGGAGAAGAACTC 59.643 48.000 0.00 0.00 44.24 3.01
589 590 4.401202 CCACTAGGAGAAGAGGAGAAGAAC 59.599 50.000 0.00 0.00 36.89 3.01
590 591 4.605183 CCACTAGGAGAAGAGGAGAAGAA 58.395 47.826 0.00 0.00 36.89 2.52
591 592 3.626222 GCCACTAGGAGAAGAGGAGAAGA 60.626 52.174 0.00 0.00 36.89 2.87
592 593 2.693074 GCCACTAGGAGAAGAGGAGAAG 59.307 54.545 0.00 0.00 36.89 2.85
594 595 1.641192 TGCCACTAGGAGAAGAGGAGA 59.359 52.381 0.00 0.00 36.89 3.71
595 596 2.031120 CTGCCACTAGGAGAAGAGGAG 58.969 57.143 0.00 0.00 36.89 3.69
597 598 2.151502 TCTGCCACTAGGAGAAGAGG 57.848 55.000 0.00 0.00 36.89 3.69
598 599 2.430332 CCTTCTGCCACTAGGAGAAGAG 59.570 54.545 21.15 10.38 43.90 2.85
599 600 2.461695 CCTTCTGCCACTAGGAGAAGA 58.538 52.381 21.15 6.34 43.90 2.87
600 601 1.134551 GCCTTCTGCCACTAGGAGAAG 60.135 57.143 14.78 14.78 42.53 2.85
601 602 0.905357 GCCTTCTGCCACTAGGAGAA 59.095 55.000 0.00 0.00 36.89 2.87
602 603 0.252239 TGCCTTCTGCCACTAGGAGA 60.252 55.000 0.00 0.00 40.16 3.71
603 604 0.835941 ATGCCTTCTGCCACTAGGAG 59.164 55.000 0.00 0.00 40.16 3.69
604 605 0.543277 CATGCCTTCTGCCACTAGGA 59.457 55.000 0.00 0.00 40.16 2.94
605 606 0.465097 CCATGCCTTCTGCCACTAGG 60.465 60.000 0.00 0.00 40.16 3.02
606 607 0.254178 ACCATGCCTTCTGCCACTAG 59.746 55.000 0.00 0.00 40.16 2.57
607 608 0.253044 GACCATGCCTTCTGCCACTA 59.747 55.000 0.00 0.00 40.16 2.74
608 609 1.001641 GACCATGCCTTCTGCCACT 60.002 57.895 0.00 0.00 40.16 4.00
609 610 2.048603 GGACCATGCCTTCTGCCAC 61.049 63.158 0.00 0.00 40.16 5.01
610 611 2.079088 TTGGACCATGCCTTCTGCCA 62.079 55.000 0.00 0.00 40.16 4.92
611 612 0.899717 TTTGGACCATGCCTTCTGCC 60.900 55.000 0.00 0.00 40.16 4.85
612 613 0.968405 TTTTGGACCATGCCTTCTGC 59.032 50.000 0.00 0.00 41.77 4.26
613 614 2.675889 GCATTTTGGACCATGCCTTCTG 60.676 50.000 7.23 0.00 40.04 3.02
614 615 1.551883 GCATTTTGGACCATGCCTTCT 59.448 47.619 7.23 0.00 40.04 2.85
616 617 1.350071 TGCATTTTGGACCATGCCTT 58.650 45.000 14.52 0.00 44.49 4.35
618 619 1.441738 GTTGCATTTTGGACCATGCC 58.558 50.000 14.52 0.00 44.49 4.40
620 621 2.721274 TCGTTGCATTTTGGACCATG 57.279 45.000 0.00 0.00 0.00 3.66
621 622 3.959535 ATTCGTTGCATTTTGGACCAT 57.040 38.095 0.00 0.00 0.00 3.55
622 623 4.551388 GTTATTCGTTGCATTTTGGACCA 58.449 39.130 0.00 0.00 0.00 4.02
623 624 3.924073 GGTTATTCGTTGCATTTTGGACC 59.076 43.478 0.00 0.00 0.00 4.46
624 625 4.551388 TGGTTATTCGTTGCATTTTGGAC 58.449 39.130 0.00 0.00 0.00 4.02
625 626 4.520874 TCTGGTTATTCGTTGCATTTTGGA 59.479 37.500 0.00 0.00 0.00 3.53
627 628 6.252015 CAGATCTGGTTATTCGTTGCATTTTG 59.748 38.462 15.38 0.00 0.00 2.44
629 630 5.415701 ACAGATCTGGTTATTCGTTGCATTT 59.584 36.000 26.08 0.00 34.19 2.32
631 632 4.333649 CACAGATCTGGTTATTCGTTGCAT 59.666 41.667 26.08 0.00 34.19 3.96
632 633 3.684305 CACAGATCTGGTTATTCGTTGCA 59.316 43.478 26.08 0.00 34.19 4.08
633 634 3.932710 TCACAGATCTGGTTATTCGTTGC 59.067 43.478 26.08 0.00 34.19 4.17
634 635 5.007039 CCATCACAGATCTGGTTATTCGTTG 59.993 44.000 26.08 12.02 34.19 4.10
635 636 5.118990 CCATCACAGATCTGGTTATTCGTT 58.881 41.667 26.08 0.00 34.19 3.85
636 637 4.697514 CCATCACAGATCTGGTTATTCGT 58.302 43.478 26.08 0.00 34.19 3.85
637 638 3.496130 GCCATCACAGATCTGGTTATTCG 59.504 47.826 26.08 8.56 32.42 3.34
638 639 4.514441 CAGCCATCACAGATCTGGTTATTC 59.486 45.833 26.08 11.08 32.42 1.75
639 640 4.458397 CAGCCATCACAGATCTGGTTATT 58.542 43.478 26.08 2.09 32.42 1.40
640 641 3.181447 CCAGCCATCACAGATCTGGTTAT 60.181 47.826 26.08 13.23 39.45 1.89
641 642 2.171237 CCAGCCATCACAGATCTGGTTA 59.829 50.000 26.08 11.53 39.45 2.85
642 643 1.064906 CCAGCCATCACAGATCTGGTT 60.065 52.381 26.08 7.99 39.45 3.67
643 644 0.545171 CCAGCCATCACAGATCTGGT 59.455 55.000 26.08 9.58 39.45 4.00
644 645 0.818445 GCCAGCCATCACAGATCTGG 60.818 60.000 26.08 15.01 45.26 3.86
645 646 0.818445 GGCCAGCCATCACAGATCTG 60.818 60.000 21.37 21.37 35.81 2.90
646 647 1.530771 GGCCAGCCATCACAGATCT 59.469 57.895 3.12 0.00 35.81 2.75
647 648 1.890979 CGGCCAGCCATCACAGATC 60.891 63.158 9.78 0.00 35.37 2.75
648 649 2.191375 CGGCCAGCCATCACAGAT 59.809 61.111 9.78 0.00 35.37 2.90
650 651 2.821366 GTCGGCCAGCCATCACAG 60.821 66.667 9.78 0.00 35.37 3.66
651 652 3.189376 TTGTCGGCCAGCCATCACA 62.189 57.895 9.78 5.30 35.37 3.58
652 653 2.359850 TTGTCGGCCAGCCATCAC 60.360 61.111 9.78 2.61 35.37 3.06
653 654 2.359850 GTTGTCGGCCAGCCATCA 60.360 61.111 9.78 4.14 35.37 3.07
660 661 1.602323 GAACCATGGTTGTCGGCCA 60.602 57.895 34.47 0.00 38.60 5.36
662 663 1.670811 CATAGAACCATGGTTGTCGGC 59.329 52.381 34.47 18.99 38.60 5.54
663 664 2.985896 ACATAGAACCATGGTTGTCGG 58.014 47.619 34.47 25.02 38.60 4.79
665 666 5.099042 AGGTACATAGAACCATGGTTGTC 57.901 43.478 34.47 20.98 39.64 3.18
666 667 5.962031 TCTAGGTACATAGAACCATGGTTGT 59.038 40.000 34.47 31.13 39.64 3.32
667 668 6.479972 TCTAGGTACATAGAACCATGGTTG 57.520 41.667 34.47 22.48 39.64 3.77
668 669 7.182206 AGTTTCTAGGTACATAGAACCATGGTT 59.818 37.037 30.23 30.23 40.59 3.67
669 670 6.672657 AGTTTCTAGGTACATAGAACCATGGT 59.327 38.462 25.31 13.00 40.59 3.55
670 671 6.986817 CAGTTTCTAGGTACATAGAACCATGG 59.013 42.308 25.31 11.19 40.59 3.66
672 673 7.735326 ACAGTTTCTAGGTACATAGAACCAT 57.265 36.000 25.31 13.68 40.59 3.55
673 674 8.111545 TCTACAGTTTCTAGGTACATAGAACCA 58.888 37.037 25.31 12.38 40.59 3.67
674 675 8.517062 TCTACAGTTTCTAGGTACATAGAACC 57.483 38.462 25.31 20.00 40.59 3.62
679 680 9.696572 AACTCATCTACAGTTTCTAGGTACATA 57.303 33.333 0.00 0.00 29.29 2.29
680 681 8.596781 AACTCATCTACAGTTTCTAGGTACAT 57.403 34.615 0.00 0.00 29.29 2.29
681 682 8.418597 AAACTCATCTACAGTTTCTAGGTACA 57.581 34.615 0.00 0.00 39.42 2.90
682 683 9.708092 AAAAACTCATCTACAGTTTCTAGGTAC 57.292 33.333 0.00 0.00 42.14 3.34
683 684 9.924650 GAAAAACTCATCTACAGTTTCTAGGTA 57.075 33.333 0.00 0.00 42.14 3.08
684 685 8.652290 AGAAAAACTCATCTACAGTTTCTAGGT 58.348 33.333 0.00 0.00 42.14 3.08
685 686 8.930760 CAGAAAAACTCATCTACAGTTTCTAGG 58.069 37.037 0.00 0.00 42.14 3.02
686 687 9.482627 ACAGAAAAACTCATCTACAGTTTCTAG 57.517 33.333 0.00 0.00 42.14 2.43
689 690 7.920738 ACACAGAAAAACTCATCTACAGTTTC 58.079 34.615 0.00 0.00 42.14 2.78
699 700 4.826733 TGGCACATACACAGAAAAACTCAT 59.173 37.500 0.00 0.00 0.00 2.90
700 701 4.203226 TGGCACATACACAGAAAAACTCA 58.797 39.130 0.00 0.00 0.00 3.41
742 743 5.672503 TGGCATTTCCATTGGTGAAATATG 58.327 37.500 1.86 0.00 39.71 1.78
910 2009 7.990886 ACGAACAATGGATAAATATGTACTGGT 59.009 33.333 0.00 0.00 0.00 4.00
1048 2148 1.545428 GGACATGAAGTGGGCAGACAA 60.545 52.381 0.00 0.00 0.00 3.18
1053 2153 1.003839 GACGGACATGAAGTGGGCA 60.004 57.895 0.00 0.00 0.00 5.36
1095 2195 1.748122 CAGCGGCTGGAAAGAGCAT 60.748 57.895 22.11 0.00 41.08 3.79
1096 2196 2.359107 CAGCGGCTGGAAAGAGCA 60.359 61.111 22.11 0.00 41.08 4.26
1195 2295 1.960040 CTGGCAGCGGGAGTGATACA 61.960 60.000 0.00 0.00 0.00 2.29
1903 12503 5.142639 AGGGCACTACATTGCATATGAAAT 58.857 37.500 6.97 4.73 44.94 2.17
2111 14572 3.439293 ACGTCTAGATTGCATCAAGTCG 58.561 45.455 0.00 0.00 0.00 4.18
2148 14622 5.174035 CGTCAACGATTGAGGTGATAGATTC 59.826 44.000 0.00 0.00 41.01 2.52
2191 14665 1.288752 GGGGCATTGGTTTGTGTCG 59.711 57.895 0.00 0.00 0.00 4.35
2240 14797 1.810853 GGCGCCATTTGCAATGGTC 60.811 57.895 24.80 15.67 41.17 4.02
2277 14844 0.629058 TTTAATGGAGTGGGGAGGGC 59.371 55.000 0.00 0.00 0.00 5.19
2456 15029 4.733725 CCACCCCCTTCCCTCGGA 62.734 72.222 0.00 0.00 0.00 4.55
2630 15647 6.930731 TCTGTTTGGACTAGCAAAAGTTTTT 58.069 32.000 0.00 0.00 0.00 1.94
2631 15648 6.524101 TCTGTTTGGACTAGCAAAAGTTTT 57.476 33.333 0.00 0.00 0.00 2.43
2632 15649 6.377146 TCTTCTGTTTGGACTAGCAAAAGTTT 59.623 34.615 0.00 0.00 0.00 2.66
2633 15650 5.885912 TCTTCTGTTTGGACTAGCAAAAGTT 59.114 36.000 0.00 0.00 0.00 2.66
2635 15652 5.760253 TCTCTTCTGTTTGGACTAGCAAAAG 59.240 40.000 0.00 0.00 0.00 2.27
2637 15654 5.057149 GTCTCTTCTGTTTGGACTAGCAAA 58.943 41.667 0.00 0.00 0.00 3.68
2639 15656 3.641436 TGTCTCTTCTGTTTGGACTAGCA 59.359 43.478 0.00 0.00 0.00 3.49
2640 15657 4.258702 TGTCTCTTCTGTTTGGACTAGC 57.741 45.455 0.00 0.00 0.00 3.42
2641 15658 8.908903 AGTATATGTCTCTTCTGTTTGGACTAG 58.091 37.037 0.00 0.00 0.00 2.57
2642 15659 8.824756 AGTATATGTCTCTTCTGTTTGGACTA 57.175 34.615 0.00 0.00 0.00 2.59
2643 15660 7.617723 AGAGTATATGTCTCTTCTGTTTGGACT 59.382 37.037 6.48 0.00 38.91 3.85
2644 15661 7.704472 CAGAGTATATGTCTCTTCTGTTTGGAC 59.296 40.741 8.80 0.00 39.84 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.