Multiple sequence alignment - TraesCS7B01G389300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G389300 chr7B 100.000 2567 0 0 1 2567 656220420 656217854 0.000000e+00 4741.0
1 TraesCS7B01G389300 chr7B 91.282 1147 79 7 714 1842 655145530 655144387 0.000000e+00 1544.0
2 TraesCS7B01G389300 chr7B 85.882 85 12 0 503 587 640479874 640479958 9.780000e-15 91.6
3 TraesCS7B01G389300 chr3D 91.507 1354 88 11 503 1841 55262557 55261216 0.000000e+00 1838.0
4 TraesCS7B01G389300 chr3D 84.328 134 20 1 454 586 84577048 84577181 2.070000e-26 130.0
5 TraesCS7B01G389300 chr7D 82.765 1143 151 27 726 1841 585907215 585906092 0.000000e+00 977.0
6 TraesCS7B01G389300 chr7A 83.257 878 104 16 978 1841 676425361 676424513 0.000000e+00 767.0
7 TraesCS7B01G389300 chr7A 86.550 684 53 7 1174 1842 676302107 676301448 0.000000e+00 717.0
8 TraesCS7B01G389300 chr7A 82.664 473 55 17 1843 2308 40852663 40853115 6.660000e-106 394.0
9 TraesCS7B01G389300 chr7A 94.304 158 7 2 907 1064 676302538 676302693 9.180000e-60 241.0
10 TraesCS7B01G389300 chr7A 77.778 108 20 4 1680 1784 113154359 113154465 2.130000e-06 63.9
11 TraesCS7B01G389300 chr1A 84.844 739 85 15 1837 2565 566191904 566192625 0.000000e+00 719.0
12 TraesCS7B01G389300 chr1A 82.815 739 90 22 1837 2565 566164497 566165208 6.030000e-176 627.0
13 TraesCS7B01G389300 chr1A 82.261 575 67 21 1843 2403 575815229 575815782 5.000000e-127 464.0
14 TraesCS7B01G389300 chr1A 86.612 366 35 9 1845 2204 540942960 540942603 2.390000e-105 392.0
15 TraesCS7B01G389300 chr6A 83.197 613 72 18 1843 2444 27375865 27376457 1.350000e-147 532.0
16 TraesCS7B01G389300 chr6A 81.019 569 69 24 1843 2396 105584803 105584259 1.420000e-112 416.0
17 TraesCS7B01G389300 chr2B 82.759 609 72 16 1843 2444 95495232 95495814 1.760000e-141 512.0
18 TraesCS7B01G389300 chr4B 78.997 738 115 28 1843 2563 654452404 654451690 3.870000e-128 468.0
19 TraesCS7B01G389300 chr4B 100.000 37 0 0 1672 1708 104335858 104335894 4.580000e-08 69.4
20 TraesCS7B01G389300 chr4A 82.857 455 56 12 1834 2285 717948381 717947946 3.100000e-104 388.0
21 TraesCS7B01G389300 chr6B 84.488 303 38 6 2265 2565 271833868 271834163 8.990000e-75 291.0
22 TraesCS7B01G389300 chr6B 89.796 49 5 0 1794 1842 202547291 202547243 2.130000e-06 63.9
23 TraesCS7B01G389300 chr4D 83.486 218 34 2 439 656 53789144 53788929 4.330000e-48 202.0
24 TraesCS7B01G389300 chr4D 90.000 50 5 0 1794 1843 374083789 374083740 5.930000e-07 65.8
25 TraesCS7B01G389300 chr3B 87.500 120 14 1 450 568 377403877 377403996 1.240000e-28 137.0
26 TraesCS7B01G389300 chr3B 85.897 78 10 1 457 534 807970067 807970143 5.890000e-12 82.4
27 TraesCS7B01G389300 chr2D 89.394 66 7 0 1776 1841 625455023 625454958 1.640000e-12 84.2
28 TraesCS7B01G389300 chr2D 95.455 44 2 0 1794 1837 423863881 423863838 1.270000e-08 71.3
29 TraesCS7B01G389300 chr5D 85.484 62 7 1 1673 1732 484050385 484050324 2.130000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G389300 chr7B 656217854 656220420 2566 True 4741 4741 100.000 1 2567 1 chr7B.!!$R2 2566
1 TraesCS7B01G389300 chr7B 655144387 655145530 1143 True 1544 1544 91.282 714 1842 1 chr7B.!!$R1 1128
2 TraesCS7B01G389300 chr3D 55261216 55262557 1341 True 1838 1838 91.507 503 1841 1 chr3D.!!$R1 1338
3 TraesCS7B01G389300 chr7D 585906092 585907215 1123 True 977 977 82.765 726 1841 1 chr7D.!!$R1 1115
4 TraesCS7B01G389300 chr7A 676424513 676425361 848 True 767 767 83.257 978 1841 1 chr7A.!!$R2 863
5 TraesCS7B01G389300 chr7A 676301448 676302107 659 True 717 717 86.550 1174 1842 1 chr7A.!!$R1 668
6 TraesCS7B01G389300 chr1A 566191904 566192625 721 False 719 719 84.844 1837 2565 1 chr1A.!!$F2 728
7 TraesCS7B01G389300 chr1A 566164497 566165208 711 False 627 627 82.815 1837 2565 1 chr1A.!!$F1 728
8 TraesCS7B01G389300 chr1A 575815229 575815782 553 False 464 464 82.261 1843 2403 1 chr1A.!!$F3 560
9 TraesCS7B01G389300 chr6A 27375865 27376457 592 False 532 532 83.197 1843 2444 1 chr6A.!!$F1 601
10 TraesCS7B01G389300 chr6A 105584259 105584803 544 True 416 416 81.019 1843 2396 1 chr6A.!!$R1 553
11 TraesCS7B01G389300 chr2B 95495232 95495814 582 False 512 512 82.759 1843 2444 1 chr2B.!!$F1 601
12 TraesCS7B01G389300 chr4B 654451690 654452404 714 True 468 468 78.997 1843 2563 1 chr4B.!!$R1 720

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
30 31 0.106894 GTGGCCTGTATACTGCCCTC 59.893 60.0 24.9 17.42 44.72 4.30 F
144 145 0.108041 TCCCAATCCGTAAACTCGCC 60.108 55.0 0.0 0.00 0.00 5.54 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1300 1317 0.117140 TTCCTCTCCTGGCCAGAGAA 59.883 55.000 34.91 22.43 40.02 2.87 R
1942 1978 1.966451 GGGAACTGCTCAACACCCG 60.966 63.158 0.00 0.00 0.00 5.28 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.897972 GGATACGGTTCGTGGCCT 59.102 61.111 3.32 0.00 41.39 5.19
18 19 1.520787 GGATACGGTTCGTGGCCTG 60.521 63.158 3.32 0.00 41.39 4.85
19 20 1.217244 GATACGGTTCGTGGCCTGT 59.783 57.895 3.32 0.00 41.39 4.00
20 21 0.457035 GATACGGTTCGTGGCCTGTA 59.543 55.000 3.32 0.00 41.39 2.74
21 22 1.068127 GATACGGTTCGTGGCCTGTAT 59.932 52.381 3.32 0.00 41.39 2.29
22 23 1.761449 TACGGTTCGTGGCCTGTATA 58.239 50.000 3.32 0.00 41.39 1.47
23 24 0.174162 ACGGTTCGTGGCCTGTATAC 59.826 55.000 3.32 0.00 39.18 1.47
24 25 0.458669 CGGTTCGTGGCCTGTATACT 59.541 55.000 3.32 0.00 0.00 2.12
25 26 1.801395 CGGTTCGTGGCCTGTATACTG 60.801 57.143 3.32 3.48 0.00 2.74
26 27 1.287425 GTTCGTGGCCTGTATACTGC 58.713 55.000 3.32 6.90 0.00 4.40
27 28 0.177141 TTCGTGGCCTGTATACTGCC 59.823 55.000 22.62 22.62 45.56 4.85
28 29 1.227556 CGTGGCCTGTATACTGCCC 60.228 63.158 24.90 15.91 44.72 5.36
29 30 1.686325 CGTGGCCTGTATACTGCCCT 61.686 60.000 24.90 0.00 44.72 5.19
30 31 0.106894 GTGGCCTGTATACTGCCCTC 59.893 60.000 24.90 17.42 44.72 4.30
31 32 1.367840 GGCCTGTATACTGCCCTCG 59.632 63.158 20.17 3.12 39.30 4.63
32 33 1.367840 GCCTGTATACTGCCCTCGG 59.632 63.158 4.17 0.00 0.00 4.63
33 34 1.113517 GCCTGTATACTGCCCTCGGA 61.114 60.000 4.17 0.00 0.00 4.55
34 35 0.674534 CCTGTATACTGCCCTCGGAC 59.325 60.000 4.17 0.00 0.00 4.79
35 36 0.674534 CTGTATACTGCCCTCGGACC 59.325 60.000 4.17 0.00 0.00 4.46
36 37 0.260816 TGTATACTGCCCTCGGACCT 59.739 55.000 4.17 0.00 0.00 3.85
37 38 0.674534 GTATACTGCCCTCGGACCTG 59.325 60.000 0.00 0.00 0.00 4.00
38 39 0.260816 TATACTGCCCTCGGACCTGT 59.739 55.000 0.00 0.00 0.00 4.00
39 40 0.260816 ATACTGCCCTCGGACCTGTA 59.739 55.000 0.00 0.00 0.00 2.74
40 41 0.395311 TACTGCCCTCGGACCTGTAG 60.395 60.000 0.00 0.00 0.00 2.74
41 42 1.379977 CTGCCCTCGGACCTGTAGA 60.380 63.158 0.00 0.00 0.00 2.59
42 43 0.970937 CTGCCCTCGGACCTGTAGAA 60.971 60.000 0.00 0.00 0.00 2.10
43 44 1.255667 TGCCCTCGGACCTGTAGAAC 61.256 60.000 0.00 0.00 0.00 3.01
44 45 0.971447 GCCCTCGGACCTGTAGAACT 60.971 60.000 0.00 0.00 0.00 3.01
45 46 1.684248 GCCCTCGGACCTGTAGAACTA 60.684 57.143 0.00 0.00 0.00 2.24
46 47 2.299521 CCCTCGGACCTGTAGAACTAG 58.700 57.143 0.00 0.00 0.00 2.57
47 48 2.299521 CCTCGGACCTGTAGAACTAGG 58.700 57.143 0.00 0.00 40.01 3.02
48 49 2.299521 CTCGGACCTGTAGAACTAGGG 58.700 57.143 0.00 0.00 38.42 3.53
49 50 1.064166 TCGGACCTGTAGAACTAGGGG 60.064 57.143 0.00 0.00 38.42 4.79
50 51 1.341778 CGGACCTGTAGAACTAGGGGT 60.342 57.143 0.00 0.00 38.42 4.95
51 52 2.386779 GGACCTGTAGAACTAGGGGTC 58.613 57.143 17.04 17.04 41.50 4.46
52 53 2.024177 GGACCTGTAGAACTAGGGGTCT 60.024 54.545 20.92 0.00 41.81 3.85
53 54 3.289836 GACCTGTAGAACTAGGGGTCTC 58.710 54.545 17.57 3.14 39.79 3.36
54 55 2.299521 CCTGTAGAACTAGGGGTCTCG 58.700 57.143 0.00 0.00 0.00 4.04
55 56 1.677052 CTGTAGAACTAGGGGTCTCGC 59.323 57.143 0.00 0.00 0.00 5.03
56 57 0.662085 GTAGAACTAGGGGTCTCGCG 59.338 60.000 0.00 0.00 0.00 5.87
57 58 0.254178 TAGAACTAGGGGTCTCGCGT 59.746 55.000 5.77 0.00 0.00 6.01
58 59 0.611340 AGAACTAGGGGTCTCGCGTT 60.611 55.000 5.77 0.00 0.00 4.84
59 60 0.245813 GAACTAGGGGTCTCGCGTTT 59.754 55.000 5.77 0.00 0.00 3.60
60 61 0.683412 AACTAGGGGTCTCGCGTTTT 59.317 50.000 5.77 0.00 0.00 2.43
61 62 0.245813 ACTAGGGGTCTCGCGTTTTC 59.754 55.000 5.77 0.00 0.00 2.29
62 63 0.245539 CTAGGGGTCTCGCGTTTTCA 59.754 55.000 5.77 0.00 0.00 2.69
63 64 0.245539 TAGGGGTCTCGCGTTTTCAG 59.754 55.000 5.77 0.00 0.00 3.02
64 65 1.301479 GGGGTCTCGCGTTTTCAGT 60.301 57.895 5.77 0.00 0.00 3.41
65 66 1.566018 GGGGTCTCGCGTTTTCAGTG 61.566 60.000 5.77 0.00 0.00 3.66
66 67 1.566018 GGGTCTCGCGTTTTCAGTGG 61.566 60.000 5.77 0.00 0.00 4.00
67 68 1.204312 GTCTCGCGTTTTCAGTGGC 59.796 57.895 5.77 0.00 0.00 5.01
68 69 1.227409 TCTCGCGTTTTCAGTGGCA 60.227 52.632 5.77 0.00 0.00 4.92
69 70 0.602638 TCTCGCGTTTTCAGTGGCAT 60.603 50.000 5.77 0.00 0.00 4.40
70 71 0.453282 CTCGCGTTTTCAGTGGCATG 60.453 55.000 5.77 0.00 0.00 4.06
71 72 1.163420 TCGCGTTTTCAGTGGCATGT 61.163 50.000 5.77 0.00 0.00 3.21
72 73 0.515127 CGCGTTTTCAGTGGCATGTA 59.485 50.000 0.00 0.00 0.00 2.29
73 74 1.069568 CGCGTTTTCAGTGGCATGTAA 60.070 47.619 0.00 0.00 0.00 2.41
74 75 2.603412 CGCGTTTTCAGTGGCATGTAAA 60.603 45.455 0.00 0.00 0.00 2.01
75 76 3.376540 GCGTTTTCAGTGGCATGTAAAA 58.623 40.909 0.00 0.00 0.00 1.52
76 77 3.181575 GCGTTTTCAGTGGCATGTAAAAC 59.818 43.478 17.28 17.28 36.92 2.43
77 78 4.947077 GTTTTCAGTGGCATGTAAAACG 57.053 40.909 14.30 0.00 32.36 3.60
78 79 4.602995 GTTTTCAGTGGCATGTAAAACGA 58.397 39.130 14.30 0.00 32.36 3.85
79 80 5.219633 GTTTTCAGTGGCATGTAAAACGAT 58.780 37.500 14.30 0.00 32.36 3.73
80 81 5.446143 TTTCAGTGGCATGTAAAACGATT 57.554 34.783 0.00 0.00 0.00 3.34
81 82 6.561737 TTTCAGTGGCATGTAAAACGATTA 57.438 33.333 0.00 0.00 0.00 1.75
82 83 5.539582 TCAGTGGCATGTAAAACGATTAC 57.460 39.130 0.00 0.00 0.00 1.89
83 84 4.998033 TCAGTGGCATGTAAAACGATTACA 59.002 37.500 16.67 16.67 38.99 2.41
84 85 5.121611 TCAGTGGCATGTAAAACGATTACAG 59.878 40.000 18.34 13.25 38.17 2.74
85 86 5.001232 AGTGGCATGTAAAACGATTACAGT 58.999 37.500 18.34 8.63 38.17 3.55
86 87 5.121768 AGTGGCATGTAAAACGATTACAGTC 59.878 40.000 18.34 13.80 38.17 3.51
87 88 4.393680 TGGCATGTAAAACGATTACAGTCC 59.606 41.667 18.34 19.00 38.17 3.85
88 89 4.201881 GGCATGTAAAACGATTACAGTCCC 60.202 45.833 18.34 14.82 38.17 4.46
89 90 4.493545 GCATGTAAAACGATTACAGTCCCG 60.494 45.833 18.34 9.34 38.17 5.14
90 91 2.995258 TGTAAAACGATTACAGTCCCGC 59.005 45.455 12.35 0.00 31.86 6.13
91 92 1.073177 AAAACGATTACAGTCCCGCG 58.927 50.000 0.00 0.00 0.00 6.46
92 93 0.244450 AAACGATTACAGTCCCGCGA 59.756 50.000 8.23 0.00 0.00 5.87
93 94 0.244450 AACGATTACAGTCCCGCGAA 59.756 50.000 8.23 0.00 0.00 4.70
94 95 0.457337 ACGATTACAGTCCCGCGAAC 60.457 55.000 8.23 5.43 0.00 3.95
95 96 0.179145 CGATTACAGTCCCGCGAACT 60.179 55.000 8.23 8.16 0.00 3.01
96 97 1.734707 CGATTACAGTCCCGCGAACTT 60.735 52.381 8.23 4.83 0.00 2.66
97 98 2.344025 GATTACAGTCCCGCGAACTTT 58.656 47.619 8.23 6.59 0.00 2.66
98 99 2.243602 TTACAGTCCCGCGAACTTTT 57.756 45.000 8.23 2.84 0.00 2.27
99 100 3.383620 TTACAGTCCCGCGAACTTTTA 57.616 42.857 8.23 1.85 0.00 1.52
100 101 1.505425 ACAGTCCCGCGAACTTTTAC 58.495 50.000 8.23 0.00 0.00 2.01
101 102 0.437295 CAGTCCCGCGAACTTTTACG 59.563 55.000 8.23 0.00 0.00 3.18
102 103 0.668401 AGTCCCGCGAACTTTTACGG 60.668 55.000 8.23 0.00 45.21 4.02
105 106 3.955775 CGCGAACTTTTACGGGGT 58.044 55.556 0.00 0.00 38.44 4.95
106 107 1.783434 CGCGAACTTTTACGGGGTC 59.217 57.895 0.00 0.00 38.44 4.46
107 108 0.668401 CGCGAACTTTTACGGGGTCT 60.668 55.000 0.00 0.00 38.44 3.85
108 109 0.794473 GCGAACTTTTACGGGGTCTG 59.206 55.000 0.00 0.00 0.00 3.51
109 110 1.875157 GCGAACTTTTACGGGGTCTGT 60.875 52.381 0.00 0.00 0.00 3.41
110 111 2.486918 CGAACTTTTACGGGGTCTGTT 58.513 47.619 0.00 0.00 0.00 3.16
111 112 2.477754 CGAACTTTTACGGGGTCTGTTC 59.522 50.000 0.00 0.00 0.00 3.18
112 113 3.736720 GAACTTTTACGGGGTCTGTTCT 58.263 45.455 0.00 0.00 32.32 3.01
113 114 3.397849 ACTTTTACGGGGTCTGTTCTC 57.602 47.619 0.00 0.00 0.00 2.87
114 115 2.288640 ACTTTTACGGGGTCTGTTCTCG 60.289 50.000 0.00 0.00 0.00 4.04
115 116 1.619654 TTTACGGGGTCTGTTCTCGA 58.380 50.000 0.00 0.00 0.00 4.04
116 117 1.843368 TTACGGGGTCTGTTCTCGAT 58.157 50.000 0.00 0.00 0.00 3.59
117 118 2.715749 TACGGGGTCTGTTCTCGATA 57.284 50.000 0.00 0.00 0.00 2.92
118 119 1.843368 ACGGGGTCTGTTCTCGATAA 58.157 50.000 0.00 0.00 0.00 1.75
119 120 2.173519 ACGGGGTCTGTTCTCGATAAA 58.826 47.619 0.00 0.00 0.00 1.40
120 121 2.564062 ACGGGGTCTGTTCTCGATAAAA 59.436 45.455 0.00 0.00 0.00 1.52
121 122 3.197116 ACGGGGTCTGTTCTCGATAAAAT 59.803 43.478 0.00 0.00 0.00 1.82
122 123 4.189231 CGGGGTCTGTTCTCGATAAAATT 58.811 43.478 0.00 0.00 0.00 1.82
123 124 5.105228 ACGGGGTCTGTTCTCGATAAAATTA 60.105 40.000 0.00 0.00 0.00 1.40
124 125 5.462398 CGGGGTCTGTTCTCGATAAAATTAG 59.538 44.000 0.00 0.00 0.00 1.73
125 126 6.346896 GGGGTCTGTTCTCGATAAAATTAGT 58.653 40.000 0.00 0.00 0.00 2.24
126 127 6.479331 GGGGTCTGTTCTCGATAAAATTAGTC 59.521 42.308 0.00 0.00 0.00 2.59
127 128 6.479331 GGGTCTGTTCTCGATAAAATTAGTCC 59.521 42.308 0.00 0.00 0.00 3.85
128 129 6.479331 GGTCTGTTCTCGATAAAATTAGTCCC 59.521 42.308 0.00 0.00 0.00 4.46
129 130 7.039882 GTCTGTTCTCGATAAAATTAGTCCCA 58.960 38.462 0.00 0.00 0.00 4.37
130 131 7.548075 GTCTGTTCTCGATAAAATTAGTCCCAA 59.452 37.037 0.00 0.00 0.00 4.12
131 132 8.265055 TCTGTTCTCGATAAAATTAGTCCCAAT 58.735 33.333 0.00 0.00 0.00 3.16
132 133 8.433421 TGTTCTCGATAAAATTAGTCCCAATC 57.567 34.615 0.00 0.00 0.00 2.67
133 134 7.497909 TGTTCTCGATAAAATTAGTCCCAATCC 59.502 37.037 0.00 0.00 0.00 3.01
134 135 6.220930 TCTCGATAAAATTAGTCCCAATCCG 58.779 40.000 0.00 0.00 0.00 4.18
135 136 5.920903 TCGATAAAATTAGTCCCAATCCGT 58.079 37.500 0.00 0.00 0.00 4.69
136 137 7.014518 TCTCGATAAAATTAGTCCCAATCCGTA 59.985 37.037 0.00 0.00 0.00 4.02
137 138 7.499292 TCGATAAAATTAGTCCCAATCCGTAA 58.501 34.615 0.00 0.00 0.00 3.18
138 139 7.986320 TCGATAAAATTAGTCCCAATCCGTAAA 59.014 33.333 0.00 0.00 0.00 2.01
139 140 8.066000 CGATAAAATTAGTCCCAATCCGTAAAC 58.934 37.037 0.00 0.00 0.00 2.01
140 141 9.117183 GATAAAATTAGTCCCAATCCGTAAACT 57.883 33.333 0.00 0.00 0.00 2.66
141 142 6.997239 AAATTAGTCCCAATCCGTAAACTC 57.003 37.500 0.00 0.00 0.00 3.01
142 143 2.667473 AGTCCCAATCCGTAAACTCG 57.333 50.000 0.00 0.00 0.00 4.18
143 144 1.004595 GTCCCAATCCGTAAACTCGC 58.995 55.000 0.00 0.00 0.00 5.03
144 145 0.108041 TCCCAATCCGTAAACTCGCC 60.108 55.000 0.00 0.00 0.00 5.54
145 146 1.426041 CCCAATCCGTAAACTCGCCG 61.426 60.000 0.00 0.00 0.00 6.46
146 147 1.426041 CCAATCCGTAAACTCGCCGG 61.426 60.000 0.00 0.00 43.03 6.13
148 149 3.364442 TCCGTAAACTCGCCGGAA 58.636 55.556 5.05 0.00 46.91 4.30
149 150 1.892338 TCCGTAAACTCGCCGGAAT 59.108 52.632 5.05 0.00 46.91 3.01
150 151 0.247185 TCCGTAAACTCGCCGGAATT 59.753 50.000 5.05 0.00 46.91 2.17
151 152 1.081094 CCGTAAACTCGCCGGAATTT 58.919 50.000 5.05 1.40 44.41 1.82
152 153 1.465777 CCGTAAACTCGCCGGAATTTT 59.534 47.619 5.05 1.48 44.41 1.82
153 154 2.095617 CCGTAAACTCGCCGGAATTTTT 60.096 45.455 5.05 0.72 44.41 1.94
154 155 3.124976 CCGTAAACTCGCCGGAATTTTTA 59.875 43.478 5.05 0.00 44.41 1.52
155 156 4.083820 CGTAAACTCGCCGGAATTTTTAC 58.916 43.478 5.05 11.84 0.00 2.01
156 157 4.377226 CGTAAACTCGCCGGAATTTTTACA 60.377 41.667 5.05 0.00 0.00 2.41
157 158 3.824414 AACTCGCCGGAATTTTTACAG 57.176 42.857 5.05 0.00 0.00 2.74
158 159 2.081462 ACTCGCCGGAATTTTTACAGG 58.919 47.619 5.05 0.00 0.00 4.00
159 160 2.081462 CTCGCCGGAATTTTTACAGGT 58.919 47.619 5.05 0.00 0.00 4.00
160 161 2.486592 CTCGCCGGAATTTTTACAGGTT 59.513 45.455 5.05 0.00 0.00 3.50
161 162 2.885894 TCGCCGGAATTTTTACAGGTTT 59.114 40.909 5.05 0.00 0.00 3.27
162 163 2.983803 CGCCGGAATTTTTACAGGTTTG 59.016 45.455 5.05 0.00 0.00 2.93
163 164 3.322369 GCCGGAATTTTTACAGGTTTGG 58.678 45.455 5.05 0.00 0.00 3.28
164 165 3.322369 CCGGAATTTTTACAGGTTTGGC 58.678 45.455 0.00 0.00 0.00 4.52
165 166 3.243907 CCGGAATTTTTACAGGTTTGGCA 60.244 43.478 0.00 0.00 0.00 4.92
166 167 4.562552 CCGGAATTTTTACAGGTTTGGCAT 60.563 41.667 0.00 0.00 0.00 4.40
167 168 4.994217 CGGAATTTTTACAGGTTTGGCATT 59.006 37.500 0.00 0.00 0.00 3.56
168 169 5.468409 CGGAATTTTTACAGGTTTGGCATTT 59.532 36.000 0.00 0.00 0.00 2.32
169 170 6.017523 CGGAATTTTTACAGGTTTGGCATTTT 60.018 34.615 0.00 0.00 0.00 1.82
170 171 7.467947 CGGAATTTTTACAGGTTTGGCATTTTT 60.468 33.333 0.00 0.00 0.00 1.94
171 172 7.647318 GGAATTTTTACAGGTTTGGCATTTTTG 59.353 33.333 0.00 0.00 0.00 2.44
172 173 7.872113 ATTTTTACAGGTTTGGCATTTTTGA 57.128 28.000 0.00 0.00 0.00 2.69
173 174 6.917217 TTTTACAGGTTTGGCATTTTTGAG 57.083 33.333 0.00 0.00 0.00 3.02
174 175 3.473923 ACAGGTTTGGCATTTTTGAGG 57.526 42.857 0.00 0.00 0.00 3.86
175 176 2.104622 ACAGGTTTGGCATTTTTGAGGG 59.895 45.455 0.00 0.00 0.00 4.30
176 177 1.699083 AGGTTTGGCATTTTTGAGGGG 59.301 47.619 0.00 0.00 0.00 4.79
177 178 1.419762 GGTTTGGCATTTTTGAGGGGT 59.580 47.619 0.00 0.00 0.00 4.95
178 179 2.549992 GGTTTGGCATTTTTGAGGGGTC 60.550 50.000 0.00 0.00 0.00 4.46
179 180 2.368548 GTTTGGCATTTTTGAGGGGTCT 59.631 45.455 0.00 0.00 0.00 3.85
180 181 3.534357 TTGGCATTTTTGAGGGGTCTA 57.466 42.857 0.00 0.00 0.00 2.59
181 182 2.802719 TGGCATTTTTGAGGGGTCTAC 58.197 47.619 0.00 0.00 0.00 2.59
182 183 2.378547 TGGCATTTTTGAGGGGTCTACT 59.621 45.455 0.00 0.00 0.00 2.57
183 184 3.589735 TGGCATTTTTGAGGGGTCTACTA 59.410 43.478 0.00 0.00 0.00 1.82
184 185 4.200092 GGCATTTTTGAGGGGTCTACTAG 58.800 47.826 0.00 0.00 0.00 2.57
185 186 4.080526 GGCATTTTTGAGGGGTCTACTAGA 60.081 45.833 0.00 0.00 0.00 2.43
186 187 5.119694 GCATTTTTGAGGGGTCTACTAGAG 58.880 45.833 0.00 0.00 0.00 2.43
187 188 5.104900 GCATTTTTGAGGGGTCTACTAGAGA 60.105 44.000 0.00 0.00 0.00 3.10
188 189 6.408662 GCATTTTTGAGGGGTCTACTAGAGAT 60.409 42.308 0.00 0.00 36.29 2.75
189 190 6.546428 TTTTTGAGGGGTCTACTAGAGATG 57.454 41.667 0.00 0.00 36.29 2.90
190 191 4.883021 TTGAGGGGTCTACTAGAGATGT 57.117 45.455 0.00 0.00 36.29 3.06
191 192 4.883021 TGAGGGGTCTACTAGAGATGTT 57.117 45.455 0.00 0.00 36.29 2.71
192 193 4.794334 TGAGGGGTCTACTAGAGATGTTC 58.206 47.826 0.00 0.00 36.29 3.18
193 194 4.479056 TGAGGGGTCTACTAGAGATGTTCT 59.521 45.833 0.00 0.00 36.29 3.01
194 195 5.044030 TGAGGGGTCTACTAGAGATGTTCTT 60.044 44.000 0.00 0.00 36.29 2.52
195 196 6.159928 TGAGGGGTCTACTAGAGATGTTCTTA 59.840 42.308 0.00 0.00 36.29 2.10
196 197 6.982899 AGGGGTCTACTAGAGATGTTCTTAA 58.017 40.000 0.00 0.00 36.29 1.85
197 198 7.597327 AGGGGTCTACTAGAGATGTTCTTAAT 58.403 38.462 0.00 0.00 36.29 1.40
198 199 7.726738 AGGGGTCTACTAGAGATGTTCTTAATC 59.273 40.741 0.00 0.00 36.29 1.75
199 200 7.308710 GGGGTCTACTAGAGATGTTCTTAATCG 60.309 44.444 0.00 0.00 36.29 3.34
200 201 7.444792 GGGTCTACTAGAGATGTTCTTAATCGA 59.555 40.741 0.00 0.00 36.29 3.59
201 202 9.005777 GGTCTACTAGAGATGTTCTTAATCGAT 57.994 37.037 0.00 0.00 36.29 3.59
219 220 9.880157 TTAATCGATACATAAACCTATAAGGCC 57.120 33.333 0.00 0.00 39.63 5.19
220 221 6.921486 TCGATACATAAACCTATAAGGCCA 57.079 37.500 5.01 0.00 39.63 5.36
221 222 7.305813 TCGATACATAAACCTATAAGGCCAA 57.694 36.000 5.01 0.00 39.63 4.52
222 223 7.737869 TCGATACATAAACCTATAAGGCCAAA 58.262 34.615 5.01 0.00 39.63 3.28
223 224 7.876068 TCGATACATAAACCTATAAGGCCAAAG 59.124 37.037 5.01 0.00 39.63 2.77
224 225 7.660208 CGATACATAAACCTATAAGGCCAAAGT 59.340 37.037 5.01 0.00 39.63 2.66
227 228 8.515695 ACATAAACCTATAAGGCCAAAGTAAC 57.484 34.615 5.01 0.00 39.63 2.50
228 229 8.110908 ACATAAACCTATAAGGCCAAAGTAACA 58.889 33.333 5.01 0.00 39.63 2.41
229 230 9.131791 CATAAACCTATAAGGCCAAAGTAACAT 57.868 33.333 5.01 0.00 39.63 2.71
232 233 9.536510 AAACCTATAAGGCCAAAGTAACATAAA 57.463 29.630 5.01 0.00 39.63 1.40
233 234 9.536510 AACCTATAAGGCCAAAGTAACATAAAA 57.463 29.630 5.01 0.00 39.63 1.52
234 235 8.963725 ACCTATAAGGCCAAAGTAACATAAAAC 58.036 33.333 5.01 0.00 39.63 2.43
235 236 9.185680 CCTATAAGGCCAAAGTAACATAAAACT 57.814 33.333 5.01 0.00 0.00 2.66
238 239 7.826918 AAGGCCAAAGTAACATAAAACTACA 57.173 32.000 5.01 0.00 0.00 2.74
239 240 7.826918 AGGCCAAAGTAACATAAAACTACAA 57.173 32.000 5.01 0.00 0.00 2.41
240 241 7.882179 AGGCCAAAGTAACATAAAACTACAAG 58.118 34.615 5.01 0.00 0.00 3.16
241 242 7.504574 AGGCCAAAGTAACATAAAACTACAAGT 59.495 33.333 5.01 0.00 0.00 3.16
242 243 7.806487 GGCCAAAGTAACATAAAACTACAAGTC 59.194 37.037 0.00 0.00 0.00 3.01
243 244 8.347035 GCCAAAGTAACATAAAACTACAAGTCA 58.653 33.333 0.00 0.00 0.00 3.41
263 264 7.027778 AGTCAAGACTTTTTGTGATACCAAC 57.972 36.000 0.00 0.00 38.83 3.77
264 265 6.601613 AGTCAAGACTTTTTGTGATACCAACA 59.398 34.615 0.00 0.00 38.83 3.33
265 266 7.122055 AGTCAAGACTTTTTGTGATACCAACAA 59.878 33.333 0.00 0.00 38.83 2.83
266 267 7.220108 GTCAAGACTTTTTGTGATACCAACAAC 59.780 37.037 0.00 0.00 0.00 3.32
267 268 7.122055 TCAAGACTTTTTGTGATACCAACAACT 59.878 33.333 0.00 0.00 0.00 3.16
268 269 7.027778 AGACTTTTTGTGATACCAACAACTC 57.972 36.000 0.00 0.00 0.00 3.01
269 270 6.828785 AGACTTTTTGTGATACCAACAACTCT 59.171 34.615 0.00 0.00 0.00 3.24
270 271 6.795399 ACTTTTTGTGATACCAACAACTCTG 58.205 36.000 0.00 0.00 0.00 3.35
271 272 6.377146 ACTTTTTGTGATACCAACAACTCTGT 59.623 34.615 0.00 0.00 37.39 3.41
273 274 7.867305 TTTTGTGATACCAACAACTCTGTTA 57.133 32.000 0.00 0.00 44.15 2.41
274 275 7.490962 TTTGTGATACCAACAACTCTGTTAG 57.509 36.000 0.00 0.00 44.15 2.34
275 276 6.169557 TGTGATACCAACAACTCTGTTAGT 57.830 37.500 0.00 0.00 44.15 2.24
276 277 7.292713 TGTGATACCAACAACTCTGTTAGTA 57.707 36.000 0.04 0.04 44.15 1.82
277 278 7.728148 TGTGATACCAACAACTCTGTTAGTAA 58.272 34.615 1.44 0.00 44.15 2.24
278 279 7.870954 TGTGATACCAACAACTCTGTTAGTAAG 59.129 37.037 1.44 0.00 44.15 2.34
279 280 6.872020 TGATACCAACAACTCTGTTAGTAAGC 59.128 38.462 1.44 0.00 44.15 3.09
280 281 5.291905 ACCAACAACTCTGTTAGTAAGCT 57.708 39.130 0.00 0.00 44.15 3.74
281 282 5.057149 ACCAACAACTCTGTTAGTAAGCTG 58.943 41.667 0.00 0.00 44.15 4.24
282 283 4.452455 CCAACAACTCTGTTAGTAAGCTGG 59.548 45.833 0.00 0.00 44.15 4.85
283 284 5.297547 CAACAACTCTGTTAGTAAGCTGGA 58.702 41.667 0.00 0.00 44.15 3.86
284 285 5.546621 ACAACTCTGTTAGTAAGCTGGAA 57.453 39.130 0.00 0.00 37.50 3.53
285 286 5.542779 ACAACTCTGTTAGTAAGCTGGAAG 58.457 41.667 0.00 0.00 37.50 3.46
286 287 5.304614 ACAACTCTGTTAGTAAGCTGGAAGA 59.695 40.000 0.00 0.00 37.50 2.87
287 288 6.183360 ACAACTCTGTTAGTAAGCTGGAAGAA 60.183 38.462 0.00 0.00 37.50 2.52
288 289 6.420913 ACTCTGTTAGTAAGCTGGAAGAAA 57.579 37.500 0.00 0.00 36.36 2.52
289 290 6.827727 ACTCTGTTAGTAAGCTGGAAGAAAA 58.172 36.000 0.00 0.00 36.36 2.29
290 291 6.706716 ACTCTGTTAGTAAGCTGGAAGAAAAC 59.293 38.462 0.00 0.00 36.36 2.43
291 292 6.588204 TCTGTTAGTAAGCTGGAAGAAAACA 58.412 36.000 0.00 0.00 34.07 2.83
292 293 6.482308 TCTGTTAGTAAGCTGGAAGAAAACAC 59.518 38.462 0.00 0.00 34.07 3.32
293 294 6.116806 TGTTAGTAAGCTGGAAGAAAACACA 58.883 36.000 0.00 0.00 34.07 3.72
294 295 6.600032 TGTTAGTAAGCTGGAAGAAAACACAA 59.400 34.615 0.00 0.00 34.07 3.33
295 296 7.121463 TGTTAGTAAGCTGGAAGAAAACACAAA 59.879 33.333 0.00 0.00 34.07 2.83
296 297 6.524101 AGTAAGCTGGAAGAAAACACAAAA 57.476 33.333 0.00 0.00 34.07 2.44
297 298 6.564328 AGTAAGCTGGAAGAAAACACAAAAG 58.436 36.000 0.00 0.00 34.07 2.27
298 299 5.405935 AAGCTGGAAGAAAACACAAAAGT 57.594 34.783 0.00 0.00 34.07 2.66
299 300 5.405935 AGCTGGAAGAAAACACAAAAGTT 57.594 34.783 0.00 0.00 34.07 2.66
300 301 5.410924 AGCTGGAAGAAAACACAAAAGTTC 58.589 37.500 0.00 0.00 34.07 3.01
301 302 5.185828 AGCTGGAAGAAAACACAAAAGTTCT 59.814 36.000 0.00 0.00 34.07 3.01
302 303 5.516696 GCTGGAAGAAAACACAAAAGTTCTC 59.483 40.000 0.00 0.00 34.07 2.87
303 304 5.636837 TGGAAGAAAACACAAAAGTTCTCG 58.363 37.500 0.00 0.00 30.10 4.04
304 305 5.182380 TGGAAGAAAACACAAAAGTTCTCGT 59.818 36.000 0.00 0.00 30.10 4.18
305 306 6.090783 GGAAGAAAACACAAAAGTTCTCGTT 58.909 36.000 0.00 0.00 30.10 3.85
306 307 6.250739 GGAAGAAAACACAAAAGTTCTCGTTC 59.749 38.462 0.00 0.00 30.10 3.95
307 308 6.249035 AGAAAACACAAAAGTTCTCGTTCA 57.751 33.333 0.00 0.00 0.00 3.18
308 309 6.314784 AGAAAACACAAAAGTTCTCGTTCAG 58.685 36.000 0.00 0.00 0.00 3.02
309 310 5.622770 AAACACAAAAGTTCTCGTTCAGT 57.377 34.783 0.00 0.00 0.00 3.41
310 311 4.859629 ACACAAAAGTTCTCGTTCAGTC 57.140 40.909 0.00 0.00 0.00 3.51
311 312 3.621715 ACACAAAAGTTCTCGTTCAGTCC 59.378 43.478 0.00 0.00 0.00 3.85
312 313 3.871594 CACAAAAGTTCTCGTTCAGTCCT 59.128 43.478 0.00 0.00 0.00 3.85
313 314 4.332819 CACAAAAGTTCTCGTTCAGTCCTT 59.667 41.667 0.00 0.00 0.00 3.36
314 315 4.332819 ACAAAAGTTCTCGTTCAGTCCTTG 59.667 41.667 0.00 0.00 0.00 3.61
315 316 4.402056 AAAGTTCTCGTTCAGTCCTTGA 57.598 40.909 0.00 0.00 0.00 3.02
316 317 4.608948 AAGTTCTCGTTCAGTCCTTGAT 57.391 40.909 0.00 0.00 35.27 2.57
317 318 3.919216 AGTTCTCGTTCAGTCCTTGATG 58.081 45.455 0.00 0.00 35.27 3.07
318 319 3.322254 AGTTCTCGTTCAGTCCTTGATGT 59.678 43.478 0.00 0.00 35.27 3.06
319 320 4.058817 GTTCTCGTTCAGTCCTTGATGTT 58.941 43.478 0.00 0.00 35.27 2.71
320 321 4.336889 TCTCGTTCAGTCCTTGATGTTT 57.663 40.909 0.00 0.00 35.27 2.83
321 322 4.703897 TCTCGTTCAGTCCTTGATGTTTT 58.296 39.130 0.00 0.00 35.27 2.43
322 323 5.123227 TCTCGTTCAGTCCTTGATGTTTTT 58.877 37.500 0.00 0.00 35.27 1.94
348 349 6.917217 AGAAGCTGATCACTTACTTATTGC 57.083 37.500 9.57 0.40 0.00 3.56
349 350 6.648192 AGAAGCTGATCACTTACTTATTGCT 58.352 36.000 9.57 2.52 0.00 3.91
350 351 6.760770 AGAAGCTGATCACTTACTTATTGCTC 59.239 38.462 9.57 1.27 0.00 4.26
351 352 5.363939 AGCTGATCACTTACTTATTGCTCC 58.636 41.667 0.00 0.00 0.00 4.70
352 353 5.104776 AGCTGATCACTTACTTATTGCTCCA 60.105 40.000 0.00 0.00 0.00 3.86
353 354 5.007136 GCTGATCACTTACTTATTGCTCCAC 59.993 44.000 0.00 0.00 0.00 4.02
354 355 6.299805 TGATCACTTACTTATTGCTCCACT 57.700 37.500 0.00 0.00 0.00 4.00
355 356 6.341316 TGATCACTTACTTATTGCTCCACTC 58.659 40.000 0.00 0.00 0.00 3.51
356 357 5.086104 TCACTTACTTATTGCTCCACTCC 57.914 43.478 0.00 0.00 0.00 3.85
357 358 4.777896 TCACTTACTTATTGCTCCACTCCT 59.222 41.667 0.00 0.00 0.00 3.69
358 359 5.248477 TCACTTACTTATTGCTCCACTCCTT 59.752 40.000 0.00 0.00 0.00 3.36
359 360 5.940470 CACTTACTTATTGCTCCACTCCTTT 59.060 40.000 0.00 0.00 0.00 3.11
360 361 6.431234 CACTTACTTATTGCTCCACTCCTTTT 59.569 38.462 0.00 0.00 0.00 2.27
361 362 7.606456 CACTTACTTATTGCTCCACTCCTTTTA 59.394 37.037 0.00 0.00 0.00 1.52
362 363 8.329502 ACTTACTTATTGCTCCACTCCTTTTAT 58.670 33.333 0.00 0.00 0.00 1.40
363 364 9.832445 CTTACTTATTGCTCCACTCCTTTTATA 57.168 33.333 0.00 0.00 0.00 0.98
366 367 9.125026 ACTTATTGCTCCACTCCTTTTATAATG 57.875 33.333 0.00 0.00 0.00 1.90
367 368 9.125026 CTTATTGCTCCACTCCTTTTATAATGT 57.875 33.333 0.00 0.00 0.00 2.71
369 370 8.682936 ATTGCTCCACTCCTTTTATAATGTAG 57.317 34.615 0.00 0.00 0.00 2.74
370 371 7.195374 TGCTCCACTCCTTTTATAATGTAGT 57.805 36.000 0.00 0.00 0.00 2.73
371 372 7.047891 TGCTCCACTCCTTTTATAATGTAGTG 58.952 38.462 0.00 0.00 34.15 2.74
372 373 6.017852 GCTCCACTCCTTTTATAATGTAGTGC 60.018 42.308 10.18 0.00 33.26 4.40
373 374 6.046593 TCCACTCCTTTTATAATGTAGTGCG 58.953 40.000 10.18 0.00 33.26 5.34
374 375 5.815740 CCACTCCTTTTATAATGTAGTGCGT 59.184 40.000 10.18 0.00 33.26 5.24
375 376 6.982141 CCACTCCTTTTATAATGTAGTGCGTA 59.018 38.462 10.18 0.00 33.26 4.42
376 377 7.656137 CCACTCCTTTTATAATGTAGTGCGTAT 59.344 37.037 10.18 0.00 33.26 3.06
377 378 8.487970 CACTCCTTTTATAATGTAGTGCGTATG 58.512 37.037 0.00 0.00 0.00 2.39
378 379 7.656137 ACTCCTTTTATAATGTAGTGCGTATGG 59.344 37.037 0.00 0.00 0.00 2.74
379 380 7.728148 TCCTTTTATAATGTAGTGCGTATGGA 58.272 34.615 0.00 0.00 0.00 3.41
380 381 8.372459 TCCTTTTATAATGTAGTGCGTATGGAT 58.628 33.333 0.00 0.00 0.00 3.41
381 382 8.999431 CCTTTTATAATGTAGTGCGTATGGATT 58.001 33.333 0.00 0.00 0.00 3.01
386 387 6.509418 AATGTAGTGCGTATGGATTTTTGT 57.491 33.333 0.00 0.00 0.00 2.83
387 388 5.950758 TGTAGTGCGTATGGATTTTTGTT 57.049 34.783 0.00 0.00 0.00 2.83
388 389 7.618502 ATGTAGTGCGTATGGATTTTTGTTA 57.381 32.000 0.00 0.00 0.00 2.41
389 390 7.436430 TGTAGTGCGTATGGATTTTTGTTAA 57.564 32.000 0.00 0.00 0.00 2.01
390 391 7.872881 TGTAGTGCGTATGGATTTTTGTTAAA 58.127 30.769 0.00 0.00 0.00 1.52
391 392 8.350722 TGTAGTGCGTATGGATTTTTGTTAAAA 58.649 29.630 0.00 0.00 37.62 1.52
392 393 9.349145 GTAGTGCGTATGGATTTTTGTTAAAAT 57.651 29.630 0.00 0.00 44.53 1.82
394 395 9.915629 AGTGCGTATGGATTTTTGTTAAAATAA 57.084 25.926 0.00 0.00 42.51 1.40
413 414 7.500807 AAATAAAACCTTAATTTAGTGCGCG 57.499 32.000 0.00 0.00 0.00 6.86
414 415 4.492791 AAAACCTTAATTTAGTGCGCGT 57.507 36.364 8.43 0.00 0.00 6.01
415 416 4.492791 AAACCTTAATTTAGTGCGCGTT 57.507 36.364 8.43 0.00 0.00 4.84
416 417 4.492791 AACCTTAATTTAGTGCGCGTTT 57.507 36.364 8.43 0.00 0.00 3.60
417 418 3.817238 ACCTTAATTTAGTGCGCGTTTG 58.183 40.909 8.43 0.00 0.00 2.93
418 419 3.251487 ACCTTAATTTAGTGCGCGTTTGT 59.749 39.130 8.43 0.00 0.00 2.83
419 420 4.451774 ACCTTAATTTAGTGCGCGTTTGTA 59.548 37.500 8.43 0.00 0.00 2.41
420 421 4.784550 CCTTAATTTAGTGCGCGTTTGTAC 59.215 41.667 8.43 0.00 0.00 2.90
421 422 3.881780 AATTTAGTGCGCGTTTGTACA 57.118 38.095 8.43 0.00 0.00 2.90
422 423 4.413495 AATTTAGTGCGCGTTTGTACAT 57.587 36.364 8.43 0.00 0.00 2.29
423 424 3.881780 TTTAGTGCGCGTTTGTACATT 57.118 38.095 8.43 0.00 0.00 2.71
424 425 2.865556 TAGTGCGCGTTTGTACATTG 57.134 45.000 8.43 0.00 0.00 2.82
425 426 0.237235 AGTGCGCGTTTGTACATTGG 59.763 50.000 8.43 0.00 0.00 3.16
426 427 0.727793 GTGCGCGTTTGTACATTGGG 60.728 55.000 8.43 0.00 0.00 4.12
427 428 1.167155 TGCGCGTTTGTACATTGGGT 61.167 50.000 8.43 0.00 0.00 4.51
428 429 0.727793 GCGCGTTTGTACATTGGGTG 60.728 55.000 8.43 0.00 0.00 4.61
429 430 0.869068 CGCGTTTGTACATTGGGTGA 59.131 50.000 0.00 0.00 0.00 4.02
430 431 1.264557 CGCGTTTGTACATTGGGTGAA 59.735 47.619 0.00 0.00 0.00 3.18
431 432 2.664424 CGCGTTTGTACATTGGGTGAAG 60.664 50.000 0.00 0.00 0.00 3.02
432 433 2.550606 GCGTTTGTACATTGGGTGAAGA 59.449 45.455 0.00 0.00 0.00 2.87
433 434 3.003897 GCGTTTGTACATTGGGTGAAGAA 59.996 43.478 0.00 0.00 0.00 2.52
434 435 4.320935 GCGTTTGTACATTGGGTGAAGAAT 60.321 41.667 0.00 0.00 0.00 2.40
435 436 5.106475 GCGTTTGTACATTGGGTGAAGAATA 60.106 40.000 0.00 0.00 0.00 1.75
436 437 6.568844 GCGTTTGTACATTGGGTGAAGAATAA 60.569 38.462 0.00 0.00 0.00 1.40
437 438 7.364200 CGTTTGTACATTGGGTGAAGAATAAA 58.636 34.615 0.00 0.00 0.00 1.40
438 439 8.026607 CGTTTGTACATTGGGTGAAGAATAAAT 58.973 33.333 0.00 0.00 0.00 1.40
439 440 9.705290 GTTTGTACATTGGGTGAAGAATAAATT 57.295 29.630 0.00 0.00 0.00 1.82
454 455 5.923665 GAATAAATTATTCTACACCCGCCG 58.076 41.667 16.20 0.00 41.00 6.46
455 456 1.589803 AATTATTCTACACCCGCCGC 58.410 50.000 0.00 0.00 0.00 6.53
456 457 0.250166 ATTATTCTACACCCGCCGCC 60.250 55.000 0.00 0.00 0.00 6.13
457 458 2.632136 TTATTCTACACCCGCCGCCG 62.632 60.000 0.00 0.00 0.00 6.46
472 473 3.765349 GCCGAAGCGAAAACAATGA 57.235 47.368 0.00 0.00 0.00 2.57
473 474 2.044888 GCCGAAGCGAAAACAATGAA 57.955 45.000 0.00 0.00 0.00 2.57
474 475 2.389998 GCCGAAGCGAAAACAATGAAA 58.610 42.857 0.00 0.00 0.00 2.69
475 476 2.792116 GCCGAAGCGAAAACAATGAAAA 59.208 40.909 0.00 0.00 0.00 2.29
476 477 3.121362 GCCGAAGCGAAAACAATGAAAAG 60.121 43.478 0.00 0.00 0.00 2.27
477 478 3.121362 CCGAAGCGAAAACAATGAAAAGC 60.121 43.478 0.00 0.00 0.00 3.51
478 479 3.121362 CGAAGCGAAAACAATGAAAAGCC 60.121 43.478 0.00 0.00 0.00 4.35
479 480 3.733443 AGCGAAAACAATGAAAAGCCT 57.267 38.095 0.00 0.00 0.00 4.58
480 481 4.846779 AGCGAAAACAATGAAAAGCCTA 57.153 36.364 0.00 0.00 0.00 3.93
481 482 5.195001 AGCGAAAACAATGAAAAGCCTAA 57.805 34.783 0.00 0.00 0.00 2.69
482 483 5.596845 AGCGAAAACAATGAAAAGCCTAAA 58.403 33.333 0.00 0.00 0.00 1.85
483 484 6.045955 AGCGAAAACAATGAAAAGCCTAAAA 58.954 32.000 0.00 0.00 0.00 1.52
484 485 6.536941 AGCGAAAACAATGAAAAGCCTAAAAA 59.463 30.769 0.00 0.00 0.00 1.94
485 486 6.627276 GCGAAAACAATGAAAAGCCTAAAAAC 59.373 34.615 0.00 0.00 0.00 2.43
486 487 7.465379 GCGAAAACAATGAAAAGCCTAAAAACT 60.465 33.333 0.00 0.00 0.00 2.66
487 488 9.026074 CGAAAACAATGAAAAGCCTAAAAACTA 57.974 29.630 0.00 0.00 0.00 2.24
490 491 9.884636 AAACAATGAAAAGCCTAAAAACTAAGT 57.115 25.926 0.00 0.00 0.00 2.24
491 492 9.884636 AACAATGAAAAGCCTAAAAACTAAGTT 57.115 25.926 0.00 0.00 0.00 2.66
498 499 9.811995 AAAAGCCTAAAAACTAAGTTACTTTGG 57.188 29.630 1.94 0.00 0.00 3.28
499 500 7.520451 AGCCTAAAAACTAAGTTACTTTGGG 57.480 36.000 1.94 0.00 31.54 4.12
500 501 6.015688 AGCCTAAAAACTAAGTTACTTTGGGC 60.016 38.462 16.71 16.71 43.59 5.36
501 502 6.015688 GCCTAAAAACTAAGTTACTTTGGGCT 60.016 38.462 16.99 0.00 41.86 5.19
506 507 6.889301 AACTAAGTTACTTTGGGCTAAACC 57.111 37.500 1.94 0.00 37.93 3.27
512 513 5.252164 AGTTACTTTGGGCTAAACCTATCCA 59.748 40.000 0.00 0.00 39.10 3.41
529 530 4.771356 ACACGCGTGGATCCGACG 62.771 66.667 39.21 23.87 39.87 5.12
534 535 3.138798 CGTGGATCCGACGACCCT 61.139 66.667 23.87 0.00 39.21 4.34
536 537 2.441532 TGGATCCGACGACCCTCC 60.442 66.667 7.39 0.00 0.00 4.30
540 541 0.824182 GATCCGACGACCCTCCTCAT 60.824 60.000 0.00 0.00 0.00 2.90
545 546 2.005960 GACGACCCTCCTCATCACCG 62.006 65.000 0.00 0.00 0.00 4.94
568 569 3.125573 CGAGGTCGTCTGCGGAGA 61.126 66.667 0.98 0.98 38.89 3.71
569 570 2.687805 CGAGGTCGTCTGCGGAGAA 61.688 63.158 8.71 0.00 38.89 2.87
570 571 1.585006 GAGGTCGTCTGCGGAGAAA 59.415 57.895 8.71 0.00 38.89 2.52
586 587 2.781595 GAAAAGCCGCCAGAGGACGA 62.782 60.000 0.00 0.00 0.00 4.20
589 590 4.821589 GCCGCCAGAGGACGAAGG 62.822 72.222 0.00 0.00 0.00 3.46
592 593 2.125350 GCCAGAGGACGAAGGCAG 60.125 66.667 0.00 0.00 46.26 4.85
613 614 1.265454 GGAACTCCCTGATGACGGGT 61.265 60.000 0.00 0.00 42.56 5.28
614 615 0.108138 GAACTCCCTGATGACGGGTG 60.108 60.000 0.00 0.00 42.56 4.61
619 620 1.374947 CCTGATGACGGGTGTTGGT 59.625 57.895 0.00 0.00 37.74 3.67
636 637 0.253327 GGTGAGATCGCCCTTTCCTT 59.747 55.000 0.68 0.00 40.56 3.36
845 849 1.958579 TGCATTCTATCTTGGCATGCC 59.041 47.619 30.54 30.54 39.66 4.40
847 851 2.497138 CATTCTATCTTGGCATGCCGA 58.503 47.619 30.87 28.19 39.42 5.54
960 965 3.936902 TTGTACTCGCACTTCACAAAC 57.063 42.857 0.00 0.00 0.00 2.93
984 989 1.407258 CATCTCCCCACGAAGAGAGAC 59.593 57.143 0.00 0.00 42.19 3.36
1007 1018 3.227147 CGCGCACACTCTATATGACTAC 58.773 50.000 8.75 0.00 0.00 2.73
1030 1047 3.243704 GGTGAAGATCATTCTCCTCCTCG 60.244 52.174 13.96 0.00 0.00 4.63
1031 1048 3.383185 GTGAAGATCATTCTCCTCCTCGT 59.617 47.826 0.00 0.00 0.00 4.18
1032 1049 4.026744 TGAAGATCATTCTCCTCCTCGTT 58.973 43.478 0.00 0.00 0.00 3.85
1193 1210 1.008194 TCGAAATATCCGGGTCGCG 60.008 57.895 0.00 0.00 33.58 5.87
1300 1317 1.668294 CTCAGCCAGAACACCTCGT 59.332 57.895 0.00 0.00 0.00 4.18
1375 1392 1.471676 CGAGAAGCTCCATAAACCGCT 60.472 52.381 0.00 0.00 0.00 5.52
1398 1415 1.243342 CCAACGAGATGCTGCCCAAA 61.243 55.000 0.00 0.00 0.00 3.28
1403 1420 1.305465 AGATGCTGCCCAAATGCCA 60.305 52.632 0.00 0.00 0.00 4.92
1404 1421 0.905809 AGATGCTGCCCAAATGCCAA 60.906 50.000 0.00 0.00 0.00 4.52
1513 1539 2.147387 AACTTGGTCTGGGCCGACT 61.147 57.895 21.77 5.64 34.38 4.18
1515 1541 3.612247 CTTGGTCTGGGCCGACTGG 62.612 68.421 21.77 12.01 34.38 4.00
1628 1656 5.464168 AGGAGCAATCAATAAAATATGCGC 58.536 37.500 0.00 0.00 38.74 6.09
1630 1658 4.858935 AGCAATCAATAAAATATGCGCGT 58.141 34.783 8.43 7.55 38.74 6.01
1640 1668 2.278182 ATATGCGCGTTTTGGCCACC 62.278 55.000 3.88 0.00 0.00 4.61
1695 1726 1.273886 GAGCATCTCTAACCGATCCCC 59.726 57.143 0.00 0.00 0.00 4.81
1710 1744 6.766429 ACCGATCCCCAATAATTTAGAGTAC 58.234 40.000 0.00 0.00 0.00 2.73
1732 1766 1.542767 CCGCCGAGTATCCTGTAGAGA 60.543 57.143 0.00 0.00 0.00 3.10
1733 1767 1.801771 CGCCGAGTATCCTGTAGAGAG 59.198 57.143 0.00 0.00 0.00 3.20
1737 1771 4.317488 CCGAGTATCCTGTAGAGAGGTAC 58.683 52.174 0.00 0.00 34.36 3.34
1746 1780 6.253758 TCCTGTAGAGAGGTACATTTTCTCA 58.746 40.000 14.38 6.74 39.79 3.27
1942 1978 0.916809 ATAGCCACACCCCAGGTTAC 59.083 55.000 0.00 0.00 31.02 2.50
1949 1985 3.163503 CCCCAGGTTACGGGTGTT 58.836 61.111 0.00 0.00 42.77 3.32
1965 2001 2.365293 GGTGTTGAGCAGTTCCCAAATT 59.635 45.455 0.00 0.00 0.00 1.82
1967 2003 4.546570 GTGTTGAGCAGTTCCCAAATTAC 58.453 43.478 0.00 0.00 0.00 1.89
1968 2004 4.278419 GTGTTGAGCAGTTCCCAAATTACT 59.722 41.667 0.00 0.00 0.00 2.24
1969 2005 4.892934 TGTTGAGCAGTTCCCAAATTACTT 59.107 37.500 0.00 0.00 0.00 2.24
2124 2170 2.831366 GCTCGCGATGACCTACGGA 61.831 63.158 10.36 0.00 0.00 4.69
2128 2174 2.331805 CGATGACCTACGGAGCCG 59.668 66.667 7.48 7.48 46.03 5.52
2235 2284 1.607612 CCTGCGGGTAATGTTCCCT 59.392 57.895 2.29 0.00 42.56 4.20
2342 2488 4.473520 CGCCGCCTCATCAACCCT 62.474 66.667 0.00 0.00 0.00 4.34
2343 2489 2.908015 GCCGCCTCATCAACCCTA 59.092 61.111 0.00 0.00 0.00 3.53
2344 2490 1.523938 GCCGCCTCATCAACCCTAC 60.524 63.158 0.00 0.00 0.00 3.18
2345 2491 1.227263 CCGCCTCATCAACCCTACG 60.227 63.158 0.00 0.00 0.00 3.51
2346 2492 1.227263 CGCCTCATCAACCCTACGG 60.227 63.158 0.00 0.00 0.00 4.02
2348 2494 0.462047 GCCTCATCAACCCTACGGTG 60.462 60.000 0.00 0.00 43.71 4.94
2409 2555 3.884350 CTACTACGGCGCGCCTCA 61.884 66.667 43.60 30.45 0.00 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.520787 CAGGCCACGAACCGTATCC 60.521 63.158 5.01 0.00 38.32 2.59
1 2 0.457035 TACAGGCCACGAACCGTATC 59.543 55.000 5.01 0.00 38.32 2.24
2 3 1.117150 ATACAGGCCACGAACCGTAT 58.883 50.000 5.01 0.00 38.32 3.06
3 4 1.405105 GTATACAGGCCACGAACCGTA 59.595 52.381 5.01 0.00 38.32 4.02
4 5 0.174162 GTATACAGGCCACGAACCGT 59.826 55.000 5.01 0.00 42.36 4.83
5 6 0.458669 AGTATACAGGCCACGAACCG 59.541 55.000 5.01 0.00 0.00 4.44
6 7 1.935933 CAGTATACAGGCCACGAACC 58.064 55.000 5.01 0.00 0.00 3.62
7 8 1.287425 GCAGTATACAGGCCACGAAC 58.713 55.000 5.01 0.00 0.00 3.95
8 9 0.177141 GGCAGTATACAGGCCACGAA 59.823 55.000 25.32 0.00 46.92 3.85
9 10 1.820581 GGCAGTATACAGGCCACGA 59.179 57.895 25.32 0.00 46.92 4.35
10 11 4.438346 GGCAGTATACAGGCCACG 57.562 61.111 25.32 0.00 46.92 4.94
13 14 1.367840 CGAGGGCAGTATACAGGCC 59.632 63.158 27.40 27.40 46.29 5.19
14 15 1.113517 TCCGAGGGCAGTATACAGGC 61.114 60.000 12.73 12.73 0.00 4.85
15 16 0.674534 GTCCGAGGGCAGTATACAGG 59.325 60.000 5.50 0.00 0.00 4.00
16 17 0.674534 GGTCCGAGGGCAGTATACAG 59.325 60.000 5.50 0.00 0.00 2.74
17 18 0.260816 AGGTCCGAGGGCAGTATACA 59.739 55.000 5.50 0.00 0.00 2.29
18 19 0.674534 CAGGTCCGAGGGCAGTATAC 59.325 60.000 0.00 0.00 0.00 1.47
19 20 0.260816 ACAGGTCCGAGGGCAGTATA 59.739 55.000 0.00 0.00 0.00 1.47
20 21 0.260816 TACAGGTCCGAGGGCAGTAT 59.739 55.000 0.00 0.00 0.00 2.12
21 22 0.395311 CTACAGGTCCGAGGGCAGTA 60.395 60.000 0.00 0.00 0.00 2.74
22 23 1.682684 CTACAGGTCCGAGGGCAGT 60.683 63.158 0.00 0.00 0.00 4.40
23 24 0.970937 TTCTACAGGTCCGAGGGCAG 60.971 60.000 0.00 0.00 0.00 4.85
24 25 1.077805 TTCTACAGGTCCGAGGGCA 59.922 57.895 0.00 0.00 0.00 5.36
25 26 0.971447 AGTTCTACAGGTCCGAGGGC 60.971 60.000 0.00 0.00 0.00 5.19
26 27 2.299521 CTAGTTCTACAGGTCCGAGGG 58.700 57.143 0.00 0.00 0.00 4.30
27 28 2.299521 CCTAGTTCTACAGGTCCGAGG 58.700 57.143 0.00 0.00 0.00 4.63
28 29 2.299521 CCCTAGTTCTACAGGTCCGAG 58.700 57.143 0.00 0.00 0.00 4.63
29 30 1.064166 CCCCTAGTTCTACAGGTCCGA 60.064 57.143 0.00 0.00 0.00 4.55
30 31 1.341778 ACCCCTAGTTCTACAGGTCCG 60.342 57.143 0.00 0.00 0.00 4.79
31 32 2.024177 AGACCCCTAGTTCTACAGGTCC 60.024 54.545 14.68 0.00 43.92 4.46
32 33 3.289836 GAGACCCCTAGTTCTACAGGTC 58.710 54.545 12.17 12.17 43.33 3.85
33 34 2.356947 CGAGACCCCTAGTTCTACAGGT 60.357 54.545 0.00 0.00 0.00 4.00
34 35 2.299521 CGAGACCCCTAGTTCTACAGG 58.700 57.143 0.00 0.00 0.00 4.00
35 36 1.677052 GCGAGACCCCTAGTTCTACAG 59.323 57.143 0.00 0.00 0.00 2.74
36 37 1.760192 GCGAGACCCCTAGTTCTACA 58.240 55.000 0.00 0.00 0.00 2.74
37 38 0.662085 CGCGAGACCCCTAGTTCTAC 59.338 60.000 0.00 0.00 0.00 2.59
38 39 0.254178 ACGCGAGACCCCTAGTTCTA 59.746 55.000 15.93 0.00 0.00 2.10
39 40 0.611340 AACGCGAGACCCCTAGTTCT 60.611 55.000 15.93 0.00 0.00 3.01
40 41 0.245813 AAACGCGAGACCCCTAGTTC 59.754 55.000 15.93 0.00 0.00 3.01
41 42 0.683412 AAAACGCGAGACCCCTAGTT 59.317 50.000 15.93 0.00 0.00 2.24
42 43 0.245813 GAAAACGCGAGACCCCTAGT 59.754 55.000 15.93 0.00 0.00 2.57
43 44 0.245539 TGAAAACGCGAGACCCCTAG 59.754 55.000 15.93 0.00 0.00 3.02
44 45 0.245539 CTGAAAACGCGAGACCCCTA 59.754 55.000 15.93 0.00 0.00 3.53
45 46 1.004918 CTGAAAACGCGAGACCCCT 60.005 57.895 15.93 0.00 0.00 4.79
46 47 1.301479 ACTGAAAACGCGAGACCCC 60.301 57.895 15.93 0.00 0.00 4.95
47 48 1.566018 CCACTGAAAACGCGAGACCC 61.566 60.000 15.93 0.00 0.00 4.46
48 49 1.860078 CCACTGAAAACGCGAGACC 59.140 57.895 15.93 0.00 0.00 3.85
49 50 1.204312 GCCACTGAAAACGCGAGAC 59.796 57.895 15.93 1.38 0.00 3.36
50 51 0.602638 ATGCCACTGAAAACGCGAGA 60.603 50.000 15.93 0.00 0.00 4.04
51 52 0.453282 CATGCCACTGAAAACGCGAG 60.453 55.000 15.93 0.36 0.00 5.03
52 53 1.163420 ACATGCCACTGAAAACGCGA 61.163 50.000 15.93 0.00 0.00 5.87
53 54 0.515127 TACATGCCACTGAAAACGCG 59.485 50.000 3.53 3.53 0.00 6.01
54 55 2.697431 TTACATGCCACTGAAAACGC 57.303 45.000 0.00 0.00 0.00 4.84
55 56 4.947077 GTTTTACATGCCACTGAAAACG 57.053 40.909 0.00 0.00 32.26 3.60
56 57 4.602995 TCGTTTTACATGCCACTGAAAAC 58.397 39.130 0.00 0.00 36.89 2.43
57 58 4.902443 TCGTTTTACATGCCACTGAAAA 57.098 36.364 0.00 0.00 0.00 2.29
58 59 5.446143 AATCGTTTTACATGCCACTGAAA 57.554 34.783 0.00 0.00 0.00 2.69
59 60 5.470437 TGTAATCGTTTTACATGCCACTGAA 59.530 36.000 8.84 0.00 30.68 3.02
60 61 4.998033 TGTAATCGTTTTACATGCCACTGA 59.002 37.500 8.84 0.00 30.68 3.41
61 62 5.106712 ACTGTAATCGTTTTACATGCCACTG 60.107 40.000 12.01 4.47 34.75 3.66
62 63 5.001232 ACTGTAATCGTTTTACATGCCACT 58.999 37.500 12.01 0.00 34.75 4.00
63 64 5.291293 ACTGTAATCGTTTTACATGCCAC 57.709 39.130 12.01 0.00 34.75 5.01
64 65 4.393680 GGACTGTAATCGTTTTACATGCCA 59.606 41.667 12.01 0.00 34.75 4.92
65 66 4.201881 GGGACTGTAATCGTTTTACATGCC 60.202 45.833 12.01 14.04 34.75 4.40
66 67 4.493545 CGGGACTGTAATCGTTTTACATGC 60.494 45.833 12.01 8.41 34.75 4.06
67 68 4.493545 GCGGGACTGTAATCGTTTTACATG 60.494 45.833 12.01 0.00 34.75 3.21
68 69 3.619929 GCGGGACTGTAATCGTTTTACAT 59.380 43.478 12.01 5.50 34.75 2.29
69 70 2.995258 GCGGGACTGTAATCGTTTTACA 59.005 45.455 11.37 11.37 34.17 2.41
70 71 2.028404 CGCGGGACTGTAATCGTTTTAC 59.972 50.000 0.00 4.69 0.00 2.01
71 72 2.094803 TCGCGGGACTGTAATCGTTTTA 60.095 45.455 6.13 0.00 0.00 1.52
72 73 1.073177 CGCGGGACTGTAATCGTTTT 58.927 50.000 0.00 0.00 0.00 2.43
73 74 0.244450 TCGCGGGACTGTAATCGTTT 59.756 50.000 6.13 0.00 0.00 3.60
74 75 0.244450 TTCGCGGGACTGTAATCGTT 59.756 50.000 6.13 0.00 0.00 3.85
75 76 0.457337 GTTCGCGGGACTGTAATCGT 60.457 55.000 6.13 0.00 0.00 3.73
76 77 0.179145 AGTTCGCGGGACTGTAATCG 60.179 55.000 6.13 0.00 0.00 3.34
77 78 2.005971 AAGTTCGCGGGACTGTAATC 57.994 50.000 15.06 0.00 0.00 1.75
78 79 2.467566 AAAGTTCGCGGGACTGTAAT 57.532 45.000 15.06 0.00 0.00 1.89
79 80 2.243602 AAAAGTTCGCGGGACTGTAA 57.756 45.000 15.06 0.00 0.00 2.41
80 81 2.676076 GTAAAAGTTCGCGGGACTGTA 58.324 47.619 15.06 9.06 0.00 2.74
81 82 1.505425 GTAAAAGTTCGCGGGACTGT 58.495 50.000 15.06 8.33 0.00 3.55
82 83 0.437295 CGTAAAAGTTCGCGGGACTG 59.563 55.000 15.06 1.35 0.00 3.51
83 84 0.668401 CCGTAAAAGTTCGCGGGACT 60.668 55.000 6.13 8.37 40.45 3.85
84 85 1.783434 CCGTAAAAGTTCGCGGGAC 59.217 57.895 6.13 5.78 40.45 4.46
85 86 4.265282 CCGTAAAAGTTCGCGGGA 57.735 55.556 6.13 0.00 40.45 5.14
87 88 1.629345 GACCCCGTAAAAGTTCGCGG 61.629 60.000 6.13 5.93 43.40 6.46
88 89 0.668401 AGACCCCGTAAAAGTTCGCG 60.668 55.000 0.00 0.00 0.00 5.87
89 90 0.794473 CAGACCCCGTAAAAGTTCGC 59.206 55.000 0.00 0.00 0.00 4.70
90 91 2.159327 ACAGACCCCGTAAAAGTTCG 57.841 50.000 0.00 0.00 0.00 3.95
91 92 3.736720 AGAACAGACCCCGTAAAAGTTC 58.263 45.455 0.00 0.00 35.40 3.01
92 93 3.736720 GAGAACAGACCCCGTAAAAGTT 58.263 45.455 0.00 0.00 0.00 2.66
93 94 2.288640 CGAGAACAGACCCCGTAAAAGT 60.289 50.000 0.00 0.00 0.00 2.66
94 95 2.029649 TCGAGAACAGACCCCGTAAAAG 60.030 50.000 0.00 0.00 0.00 2.27
95 96 1.962807 TCGAGAACAGACCCCGTAAAA 59.037 47.619 0.00 0.00 0.00 1.52
96 97 1.619654 TCGAGAACAGACCCCGTAAA 58.380 50.000 0.00 0.00 0.00 2.01
97 98 1.843368 ATCGAGAACAGACCCCGTAA 58.157 50.000 0.00 0.00 0.00 3.18
98 99 2.715749 TATCGAGAACAGACCCCGTA 57.284 50.000 0.00 0.00 0.00 4.02
99 100 1.843368 TTATCGAGAACAGACCCCGT 58.157 50.000 0.00 0.00 0.00 5.28
100 101 2.953466 TTTATCGAGAACAGACCCCG 57.047 50.000 0.00 0.00 0.00 5.73
101 102 6.346896 ACTAATTTTATCGAGAACAGACCCC 58.653 40.000 0.00 0.00 0.00 4.95
102 103 6.479331 GGACTAATTTTATCGAGAACAGACCC 59.521 42.308 0.00 0.00 0.00 4.46
103 104 6.479331 GGGACTAATTTTATCGAGAACAGACC 59.521 42.308 0.00 0.00 0.00 3.85
104 105 7.039882 TGGGACTAATTTTATCGAGAACAGAC 58.960 38.462 0.00 0.00 0.00 3.51
105 106 7.177832 TGGGACTAATTTTATCGAGAACAGA 57.822 36.000 0.00 0.00 0.00 3.41
106 107 7.843490 TTGGGACTAATTTTATCGAGAACAG 57.157 36.000 0.00 0.00 0.00 3.16
107 108 7.497909 GGATTGGGACTAATTTTATCGAGAACA 59.502 37.037 0.00 0.00 0.00 3.18
108 109 7.307219 CGGATTGGGACTAATTTTATCGAGAAC 60.307 40.741 0.00 0.00 0.00 3.01
109 110 6.704493 CGGATTGGGACTAATTTTATCGAGAA 59.296 38.462 0.00 0.00 0.00 2.87
110 111 6.183360 ACGGATTGGGACTAATTTTATCGAGA 60.183 38.462 0.00 0.00 0.00 4.04
111 112 5.989777 ACGGATTGGGACTAATTTTATCGAG 59.010 40.000 0.00 0.00 0.00 4.04
112 113 5.920903 ACGGATTGGGACTAATTTTATCGA 58.079 37.500 0.00 0.00 0.00 3.59
113 114 7.718272 TTACGGATTGGGACTAATTTTATCG 57.282 36.000 0.00 0.00 0.00 2.92
114 115 9.117183 AGTTTACGGATTGGGACTAATTTTATC 57.883 33.333 0.00 0.00 0.00 1.75
115 116 9.117183 GAGTTTACGGATTGGGACTAATTTTAT 57.883 33.333 0.00 0.00 0.00 1.40
116 117 7.278424 CGAGTTTACGGATTGGGACTAATTTTA 59.722 37.037 0.00 0.00 0.00 1.52
117 118 6.093082 CGAGTTTACGGATTGGGACTAATTTT 59.907 38.462 0.00 0.00 0.00 1.82
118 119 5.583457 CGAGTTTACGGATTGGGACTAATTT 59.417 40.000 0.00 0.00 0.00 1.82
119 120 5.114081 CGAGTTTACGGATTGGGACTAATT 58.886 41.667 0.00 0.00 0.00 1.40
120 121 4.690122 CGAGTTTACGGATTGGGACTAAT 58.310 43.478 0.00 0.00 0.00 1.73
121 122 3.676873 GCGAGTTTACGGATTGGGACTAA 60.677 47.826 0.00 0.00 0.00 2.24
122 123 2.159198 GCGAGTTTACGGATTGGGACTA 60.159 50.000 0.00 0.00 0.00 2.59
123 124 1.405121 GCGAGTTTACGGATTGGGACT 60.405 52.381 0.00 0.00 0.00 3.85
124 125 1.004595 GCGAGTTTACGGATTGGGAC 58.995 55.000 0.00 0.00 0.00 4.46
125 126 0.108041 GGCGAGTTTACGGATTGGGA 60.108 55.000 0.00 0.00 0.00 4.37
126 127 1.426041 CGGCGAGTTTACGGATTGGG 61.426 60.000 0.00 0.00 0.00 4.12
127 128 2.003672 CGGCGAGTTTACGGATTGG 58.996 57.895 0.00 0.00 0.00 3.16
133 134 2.886587 AAAATTCCGGCGAGTTTACG 57.113 45.000 9.30 0.00 28.66 3.18
134 135 5.033326 TGTAAAAATTCCGGCGAGTTTAC 57.967 39.130 9.30 14.48 28.66 2.01
135 136 4.154556 CCTGTAAAAATTCCGGCGAGTTTA 59.845 41.667 9.30 2.54 28.66 2.01
136 137 3.057806 CCTGTAAAAATTCCGGCGAGTTT 60.058 43.478 9.30 3.19 29.82 2.66
137 138 2.486592 CCTGTAAAAATTCCGGCGAGTT 59.513 45.455 9.30 0.00 0.00 3.01
138 139 2.081462 CCTGTAAAAATTCCGGCGAGT 58.919 47.619 9.30 0.00 0.00 4.18
139 140 2.081462 ACCTGTAAAAATTCCGGCGAG 58.919 47.619 9.30 0.00 0.00 5.03
140 141 2.188062 ACCTGTAAAAATTCCGGCGA 57.812 45.000 9.30 0.00 0.00 5.54
141 142 2.983803 CAAACCTGTAAAAATTCCGGCG 59.016 45.455 0.00 0.00 0.00 6.46
142 143 3.322369 CCAAACCTGTAAAAATTCCGGC 58.678 45.455 0.00 0.00 0.00 6.13
143 144 3.243907 TGCCAAACCTGTAAAAATTCCGG 60.244 43.478 0.00 0.00 0.00 5.14
144 145 3.983741 TGCCAAACCTGTAAAAATTCCG 58.016 40.909 0.00 0.00 0.00 4.30
145 146 6.875948 AAATGCCAAACCTGTAAAAATTCC 57.124 33.333 0.00 0.00 0.00 3.01
146 147 8.401709 TCAAAAATGCCAAACCTGTAAAAATTC 58.598 29.630 0.00 0.00 0.00 2.17
147 148 8.286191 TCAAAAATGCCAAACCTGTAAAAATT 57.714 26.923 0.00 0.00 0.00 1.82
148 149 7.013178 CCTCAAAAATGCCAAACCTGTAAAAAT 59.987 33.333 0.00 0.00 0.00 1.82
149 150 6.317391 CCTCAAAAATGCCAAACCTGTAAAAA 59.683 34.615 0.00 0.00 0.00 1.94
150 151 5.819901 CCTCAAAAATGCCAAACCTGTAAAA 59.180 36.000 0.00 0.00 0.00 1.52
151 152 5.363939 CCTCAAAAATGCCAAACCTGTAAA 58.636 37.500 0.00 0.00 0.00 2.01
152 153 4.202305 CCCTCAAAAATGCCAAACCTGTAA 60.202 41.667 0.00 0.00 0.00 2.41
153 154 3.323403 CCCTCAAAAATGCCAAACCTGTA 59.677 43.478 0.00 0.00 0.00 2.74
154 155 2.104622 CCCTCAAAAATGCCAAACCTGT 59.895 45.455 0.00 0.00 0.00 4.00
155 156 2.550639 CCCCTCAAAAATGCCAAACCTG 60.551 50.000 0.00 0.00 0.00 4.00
156 157 1.699083 CCCCTCAAAAATGCCAAACCT 59.301 47.619 0.00 0.00 0.00 3.50
157 158 1.419762 ACCCCTCAAAAATGCCAAACC 59.580 47.619 0.00 0.00 0.00 3.27
158 159 2.368548 AGACCCCTCAAAAATGCCAAAC 59.631 45.455 0.00 0.00 0.00 2.93
159 160 2.688477 AGACCCCTCAAAAATGCCAAA 58.312 42.857 0.00 0.00 0.00 3.28
160 161 2.397044 AGACCCCTCAAAAATGCCAA 57.603 45.000 0.00 0.00 0.00 4.52
161 162 2.378547 AGTAGACCCCTCAAAAATGCCA 59.621 45.455 0.00 0.00 0.00 4.92
162 163 3.087370 AGTAGACCCCTCAAAAATGCC 57.913 47.619 0.00 0.00 0.00 4.40
163 164 5.099042 TCTAGTAGACCCCTCAAAAATGC 57.901 43.478 0.00 0.00 0.00 3.56
164 165 6.546428 TCTCTAGTAGACCCCTCAAAAATG 57.454 41.667 0.00 0.00 0.00 2.32
165 166 6.674419 ACATCTCTAGTAGACCCCTCAAAAAT 59.326 38.462 0.00 0.00 36.93 1.82
166 167 6.023603 ACATCTCTAGTAGACCCCTCAAAAA 58.976 40.000 0.00 0.00 36.93 1.94
167 168 5.590818 ACATCTCTAGTAGACCCCTCAAAA 58.409 41.667 0.00 0.00 36.93 2.44
168 169 5.208294 ACATCTCTAGTAGACCCCTCAAA 57.792 43.478 0.00 0.00 36.93 2.69
169 170 4.883021 ACATCTCTAGTAGACCCCTCAA 57.117 45.455 0.00 0.00 36.93 3.02
170 171 4.479056 AGAACATCTCTAGTAGACCCCTCA 59.521 45.833 0.00 0.00 36.93 3.86
171 172 5.056553 AGAACATCTCTAGTAGACCCCTC 57.943 47.826 0.00 0.00 36.93 4.30
172 173 5.475398 AAGAACATCTCTAGTAGACCCCT 57.525 43.478 0.00 0.00 36.93 4.79
173 174 7.308710 CGATTAAGAACATCTCTAGTAGACCCC 60.309 44.444 0.00 0.00 36.93 4.95
174 175 7.444792 TCGATTAAGAACATCTCTAGTAGACCC 59.555 40.741 0.00 0.00 36.93 4.46
175 176 8.380743 TCGATTAAGAACATCTCTAGTAGACC 57.619 38.462 0.00 0.00 36.93 3.85
193 194 9.880157 GGCCTTATAGGTTTATGTATCGATTAA 57.120 33.333 1.71 0.00 37.80 1.40
194 195 9.038072 TGGCCTTATAGGTTTATGTATCGATTA 57.962 33.333 1.71 0.00 37.80 1.75
195 196 7.913789 TGGCCTTATAGGTTTATGTATCGATT 58.086 34.615 1.71 0.00 37.80 3.34
196 197 7.490657 TGGCCTTATAGGTTTATGTATCGAT 57.509 36.000 3.32 2.16 37.80 3.59
197 198 6.921486 TGGCCTTATAGGTTTATGTATCGA 57.079 37.500 3.32 0.00 37.80 3.59
198 199 7.660208 ACTTTGGCCTTATAGGTTTATGTATCG 59.340 37.037 3.32 0.00 37.80 2.92
199 200 8.919777 ACTTTGGCCTTATAGGTTTATGTATC 57.080 34.615 3.32 0.00 37.80 2.24
201 202 9.617523 GTTACTTTGGCCTTATAGGTTTATGTA 57.382 33.333 3.32 0.00 37.80 2.29
202 203 8.110908 TGTTACTTTGGCCTTATAGGTTTATGT 58.889 33.333 3.32 0.00 37.80 2.29
203 204 8.514330 TGTTACTTTGGCCTTATAGGTTTATG 57.486 34.615 3.32 0.00 37.80 1.90
206 207 9.536510 TTTATGTTACTTTGGCCTTATAGGTTT 57.463 29.630 3.32 0.00 37.80 3.27
207 208 9.536510 TTTTATGTTACTTTGGCCTTATAGGTT 57.463 29.630 3.32 0.00 37.80 3.50
208 209 8.963725 GTTTTATGTTACTTTGGCCTTATAGGT 58.036 33.333 3.32 0.00 37.80 3.08
209 210 9.185680 AGTTTTATGTTACTTTGGCCTTATAGG 57.814 33.333 3.32 0.00 38.80 2.57
212 213 9.523168 TGTAGTTTTATGTTACTTTGGCCTTAT 57.477 29.630 3.32 0.00 0.00 1.73
213 214 8.921353 TGTAGTTTTATGTTACTTTGGCCTTA 57.079 30.769 3.32 0.00 0.00 2.69
214 215 7.826918 TGTAGTTTTATGTTACTTTGGCCTT 57.173 32.000 3.32 0.00 0.00 4.35
215 216 7.504574 ACTTGTAGTTTTATGTTACTTTGGCCT 59.495 33.333 3.32 0.00 0.00 5.19
216 217 7.654568 ACTTGTAGTTTTATGTTACTTTGGCC 58.345 34.615 0.00 0.00 0.00 5.36
217 218 8.347035 TGACTTGTAGTTTTATGTTACTTTGGC 58.653 33.333 0.00 0.00 0.00 4.52
229 230 9.834628 CACAAAAAGTCTTGACTTGTAGTTTTA 57.165 29.630 15.61 0.00 0.00 1.52
230 231 8.573035 TCACAAAAAGTCTTGACTTGTAGTTTT 58.427 29.630 15.61 9.66 0.00 2.43
231 232 8.106247 TCACAAAAAGTCTTGACTTGTAGTTT 57.894 30.769 15.61 9.97 0.00 2.66
232 233 7.681939 TCACAAAAAGTCTTGACTTGTAGTT 57.318 32.000 15.61 4.89 0.00 2.24
233 234 7.865706 ATCACAAAAAGTCTTGACTTGTAGT 57.134 32.000 15.61 11.37 0.00 2.73
234 235 8.283291 GGTATCACAAAAAGTCTTGACTTGTAG 58.717 37.037 15.61 10.85 0.00 2.74
235 236 7.771361 TGGTATCACAAAAAGTCTTGACTTGTA 59.229 33.333 15.61 0.00 0.00 2.41
236 237 6.601613 TGGTATCACAAAAAGTCTTGACTTGT 59.398 34.615 15.61 8.42 0.00 3.16
237 238 7.026631 TGGTATCACAAAAAGTCTTGACTTG 57.973 36.000 15.61 7.85 0.00 3.16
238 239 7.122055 TGTTGGTATCACAAAAAGTCTTGACTT 59.878 33.333 9.93 9.93 31.17 3.01
239 240 6.601613 TGTTGGTATCACAAAAAGTCTTGACT 59.398 34.615 0.00 0.00 31.17 3.41
240 241 6.791303 TGTTGGTATCACAAAAAGTCTTGAC 58.209 36.000 0.00 0.00 31.17 3.18
241 242 7.122055 AGTTGTTGGTATCACAAAAAGTCTTGA 59.878 33.333 0.00 0.00 27.48 3.02
242 243 7.257722 AGTTGTTGGTATCACAAAAAGTCTTG 58.742 34.615 0.00 0.00 27.48 3.02
243 244 7.404671 AGTTGTTGGTATCACAAAAAGTCTT 57.595 32.000 0.00 0.00 27.48 3.01
244 245 6.828785 AGAGTTGTTGGTATCACAAAAAGTCT 59.171 34.615 11.51 11.51 46.25 3.24
245 246 6.912591 CAGAGTTGTTGGTATCACAAAAAGTC 59.087 38.462 8.07 8.07 43.57 3.01
246 247 6.377146 ACAGAGTTGTTGGTATCACAAAAAGT 59.623 34.615 0.00 0.00 34.68 2.66
247 248 6.795399 ACAGAGTTGTTGGTATCACAAAAAG 58.205 36.000 0.00 0.00 32.28 2.27
248 249 6.767524 ACAGAGTTGTTGGTATCACAAAAA 57.232 33.333 0.00 0.00 32.28 1.94
249 250 6.767524 AACAGAGTTGTTGGTATCACAAAA 57.232 33.333 0.00 0.00 45.54 2.44
250 251 7.490962 CTAACAGAGTTGTTGGTATCACAAA 57.509 36.000 3.33 0.00 46.63 2.83
259 260 4.452455 CCAGCTTACTAACAGAGTTGTTGG 59.548 45.833 3.33 3.04 46.63 3.77
260 261 5.297547 TCCAGCTTACTAACAGAGTTGTTG 58.702 41.667 3.33 0.00 46.63 3.33
262 263 5.304614 TCTTCCAGCTTACTAACAGAGTTGT 59.695 40.000 0.00 0.00 39.81 3.32
263 264 5.784177 TCTTCCAGCTTACTAACAGAGTTG 58.216 41.667 0.00 0.00 39.81 3.16
264 265 6.420913 TTCTTCCAGCTTACTAACAGAGTT 57.579 37.500 0.00 0.00 39.81 3.01
265 266 6.420913 TTTCTTCCAGCTTACTAACAGAGT 57.579 37.500 0.00 0.00 42.69 3.24
266 267 6.706270 TGTTTTCTTCCAGCTTACTAACAGAG 59.294 38.462 0.00 0.00 0.00 3.35
267 268 6.482308 GTGTTTTCTTCCAGCTTACTAACAGA 59.518 38.462 0.00 0.00 0.00 3.41
268 269 6.260050 TGTGTTTTCTTCCAGCTTACTAACAG 59.740 38.462 0.00 0.00 0.00 3.16
269 270 6.116806 TGTGTTTTCTTCCAGCTTACTAACA 58.883 36.000 0.00 0.00 0.00 2.41
270 271 6.613755 TGTGTTTTCTTCCAGCTTACTAAC 57.386 37.500 0.00 0.00 0.00 2.34
271 272 7.633193 TTTGTGTTTTCTTCCAGCTTACTAA 57.367 32.000 0.00 0.00 0.00 2.24
272 273 7.338449 ACTTTTGTGTTTTCTTCCAGCTTACTA 59.662 33.333 0.00 0.00 0.00 1.82
273 274 6.152831 ACTTTTGTGTTTTCTTCCAGCTTACT 59.847 34.615 0.00 0.00 0.00 2.24
274 275 6.330278 ACTTTTGTGTTTTCTTCCAGCTTAC 58.670 36.000 0.00 0.00 0.00 2.34
275 276 6.524101 ACTTTTGTGTTTTCTTCCAGCTTA 57.476 33.333 0.00 0.00 0.00 3.09
276 277 5.405935 ACTTTTGTGTTTTCTTCCAGCTT 57.594 34.783 0.00 0.00 0.00 3.74
277 278 5.185828 AGAACTTTTGTGTTTTCTTCCAGCT 59.814 36.000 0.00 0.00 0.00 4.24
278 279 5.410924 AGAACTTTTGTGTTTTCTTCCAGC 58.589 37.500 0.00 0.00 0.00 4.85
279 280 5.739161 CGAGAACTTTTGTGTTTTCTTCCAG 59.261 40.000 0.00 0.00 31.44 3.86
280 281 5.182380 ACGAGAACTTTTGTGTTTTCTTCCA 59.818 36.000 0.00 0.00 31.44 3.53
281 282 5.637809 ACGAGAACTTTTGTGTTTTCTTCC 58.362 37.500 0.00 0.00 31.44 3.46
282 283 6.799925 TGAACGAGAACTTTTGTGTTTTCTTC 59.200 34.615 0.00 0.00 31.44 2.87
283 284 6.674066 TGAACGAGAACTTTTGTGTTTTCTT 58.326 32.000 0.00 0.00 31.44 2.52
284 285 6.072673 ACTGAACGAGAACTTTTGTGTTTTCT 60.073 34.615 0.00 0.00 31.44 2.52
285 286 6.084277 ACTGAACGAGAACTTTTGTGTTTTC 58.916 36.000 0.00 0.00 0.00 2.29
286 287 6.009115 ACTGAACGAGAACTTTTGTGTTTT 57.991 33.333 0.00 0.00 0.00 2.43
287 288 5.391629 GGACTGAACGAGAACTTTTGTGTTT 60.392 40.000 0.00 0.00 0.00 2.83
288 289 4.094442 GGACTGAACGAGAACTTTTGTGTT 59.906 41.667 0.00 0.00 0.00 3.32
289 290 3.621715 GGACTGAACGAGAACTTTTGTGT 59.378 43.478 0.00 0.00 0.00 3.72
290 291 3.871594 AGGACTGAACGAGAACTTTTGTG 59.128 43.478 0.00 0.00 0.00 3.33
291 292 4.138487 AGGACTGAACGAGAACTTTTGT 57.862 40.909 0.00 0.00 0.00 2.83
292 293 4.570772 TCAAGGACTGAACGAGAACTTTTG 59.429 41.667 0.00 0.00 0.00 2.44
293 294 4.766375 TCAAGGACTGAACGAGAACTTTT 58.234 39.130 0.00 0.00 0.00 2.27
294 295 4.402056 TCAAGGACTGAACGAGAACTTT 57.598 40.909 0.00 0.00 0.00 2.66
295 296 4.202264 ACATCAAGGACTGAACGAGAACTT 60.202 41.667 0.00 0.00 37.67 2.66
296 297 3.322254 ACATCAAGGACTGAACGAGAACT 59.678 43.478 0.00 0.00 37.67 3.01
297 298 3.654414 ACATCAAGGACTGAACGAGAAC 58.346 45.455 0.00 0.00 37.67 3.01
298 299 4.336889 AACATCAAGGACTGAACGAGAA 57.663 40.909 0.00 0.00 37.67 2.87
299 300 4.336889 AAACATCAAGGACTGAACGAGA 57.663 40.909 0.00 0.00 37.67 4.04
300 301 5.424121 AAAAACATCAAGGACTGAACGAG 57.576 39.130 0.00 0.00 37.67 4.18
322 323 8.883731 GCAATAAGTAAGTGATCAGCTTCTAAA 58.116 33.333 12.05 1.85 0.00 1.85
323 324 8.260818 AGCAATAAGTAAGTGATCAGCTTCTAA 58.739 33.333 12.05 0.00 0.00 2.10
324 325 7.786030 AGCAATAAGTAAGTGATCAGCTTCTA 58.214 34.615 12.05 5.79 0.00 2.10
325 326 6.648192 AGCAATAAGTAAGTGATCAGCTTCT 58.352 36.000 12.05 8.15 0.00 2.85
326 327 6.018343 GGAGCAATAAGTAAGTGATCAGCTTC 60.018 42.308 12.05 2.20 29.28 3.86
327 328 5.819901 GGAGCAATAAGTAAGTGATCAGCTT 59.180 40.000 12.93 12.93 29.28 3.74
328 329 5.104776 TGGAGCAATAAGTAAGTGATCAGCT 60.105 40.000 0.00 0.00 29.28 4.24
329 330 5.007136 GTGGAGCAATAAGTAAGTGATCAGC 59.993 44.000 0.00 0.00 29.28 4.26
330 331 6.344500 AGTGGAGCAATAAGTAAGTGATCAG 58.656 40.000 0.00 0.00 29.28 2.90
331 332 6.299805 AGTGGAGCAATAAGTAAGTGATCA 57.700 37.500 0.00 0.00 29.28 2.92
332 333 5.755861 GGAGTGGAGCAATAAGTAAGTGATC 59.244 44.000 0.00 0.00 0.00 2.92
333 334 5.426833 AGGAGTGGAGCAATAAGTAAGTGAT 59.573 40.000 0.00 0.00 0.00 3.06
334 335 4.777896 AGGAGTGGAGCAATAAGTAAGTGA 59.222 41.667 0.00 0.00 0.00 3.41
335 336 5.091261 AGGAGTGGAGCAATAAGTAAGTG 57.909 43.478 0.00 0.00 0.00 3.16
336 337 5.763876 AAGGAGTGGAGCAATAAGTAAGT 57.236 39.130 0.00 0.00 0.00 2.24
337 338 8.738645 ATAAAAGGAGTGGAGCAATAAGTAAG 57.261 34.615 0.00 0.00 0.00 2.34
340 341 9.125026 CATTATAAAAGGAGTGGAGCAATAAGT 57.875 33.333 0.00 0.00 0.00 2.24
341 342 9.125026 ACATTATAAAAGGAGTGGAGCAATAAG 57.875 33.333 0.00 0.00 0.00 1.73
343 344 9.778741 CTACATTATAAAAGGAGTGGAGCAATA 57.221 33.333 0.00 0.00 0.00 1.90
344 345 8.275040 ACTACATTATAAAAGGAGTGGAGCAAT 58.725 33.333 5.60 0.00 0.00 3.56
345 346 7.552687 CACTACATTATAAAAGGAGTGGAGCAA 59.447 37.037 18.97 0.00 31.34 3.91
346 347 7.047891 CACTACATTATAAAAGGAGTGGAGCA 58.952 38.462 18.97 0.00 31.34 4.26
347 348 6.017852 GCACTACATTATAAAAGGAGTGGAGC 60.018 42.308 24.10 13.32 34.70 4.70
348 349 6.201044 CGCACTACATTATAAAAGGAGTGGAG 59.799 42.308 24.10 11.88 34.70 3.86
349 350 6.046593 CGCACTACATTATAAAAGGAGTGGA 58.953 40.000 24.10 2.17 34.70 4.02
350 351 5.815740 ACGCACTACATTATAAAAGGAGTGG 59.184 40.000 24.10 18.77 34.70 4.00
351 352 6.903883 ACGCACTACATTATAAAAGGAGTG 57.096 37.500 21.03 21.03 36.70 3.51
352 353 7.656137 CCATACGCACTACATTATAAAAGGAGT 59.344 37.037 1.37 1.37 0.00 3.85
353 354 7.870954 TCCATACGCACTACATTATAAAAGGAG 59.129 37.037 0.00 0.00 0.00 3.69
354 355 7.728148 TCCATACGCACTACATTATAAAAGGA 58.272 34.615 0.00 0.00 0.00 3.36
355 356 7.956420 TCCATACGCACTACATTATAAAAGG 57.044 36.000 0.00 0.00 0.00 3.11
360 361 9.332502 ACAAAAATCCATACGCACTACATTATA 57.667 29.630 0.00 0.00 0.00 0.98
361 362 8.220755 ACAAAAATCCATACGCACTACATTAT 57.779 30.769 0.00 0.00 0.00 1.28
362 363 7.618502 ACAAAAATCCATACGCACTACATTA 57.381 32.000 0.00 0.00 0.00 1.90
363 364 6.509418 ACAAAAATCCATACGCACTACATT 57.491 33.333 0.00 0.00 0.00 2.71
364 365 6.509418 AACAAAAATCCATACGCACTACAT 57.491 33.333 0.00 0.00 0.00 2.29
365 366 5.950758 AACAAAAATCCATACGCACTACA 57.049 34.783 0.00 0.00 0.00 2.74
366 367 8.730970 TTTTAACAAAAATCCATACGCACTAC 57.269 30.769 0.00 0.00 0.00 2.73
368 369 9.915629 TTATTTTAACAAAAATCCATACGCACT 57.084 25.926 0.00 0.00 34.51 4.40
387 388 9.063739 CGCGCACTAAATTAAGGTTTTATTTTA 57.936 29.630 8.75 0.00 0.00 1.52
388 389 7.595875 ACGCGCACTAAATTAAGGTTTTATTTT 59.404 29.630 5.73 0.00 0.00 1.82
389 390 7.085746 ACGCGCACTAAATTAAGGTTTTATTT 58.914 30.769 5.73 0.00 0.00 1.40
390 391 6.614160 ACGCGCACTAAATTAAGGTTTTATT 58.386 32.000 5.73 0.00 0.00 1.40
391 392 6.185852 ACGCGCACTAAATTAAGGTTTTAT 57.814 33.333 5.73 0.00 0.00 1.40
392 393 5.610235 ACGCGCACTAAATTAAGGTTTTA 57.390 34.783 5.73 0.00 0.00 1.52
393 394 4.492791 ACGCGCACTAAATTAAGGTTTT 57.507 36.364 5.73 0.00 0.00 2.43
394 395 4.492791 AACGCGCACTAAATTAAGGTTT 57.507 36.364 5.73 0.00 0.00 3.27
395 396 4.223659 CAAACGCGCACTAAATTAAGGTT 58.776 39.130 5.73 0.00 0.00 3.50
396 397 3.251487 ACAAACGCGCACTAAATTAAGGT 59.749 39.130 5.73 0.00 0.00 3.50
397 398 3.817238 ACAAACGCGCACTAAATTAAGG 58.183 40.909 5.73 0.00 0.00 2.69
398 399 5.375717 TGTACAAACGCGCACTAAATTAAG 58.624 37.500 5.73 0.00 0.00 1.85
399 400 5.340010 TGTACAAACGCGCACTAAATTAA 57.660 34.783 5.73 0.00 0.00 1.40
400 401 4.986875 TGTACAAACGCGCACTAAATTA 57.013 36.364 5.73 0.00 0.00 1.40
401 402 3.881780 TGTACAAACGCGCACTAAATT 57.118 38.095 5.73 0.00 0.00 1.82
402 403 4.155449 CAATGTACAAACGCGCACTAAAT 58.845 39.130 5.73 0.00 0.00 1.40
403 404 3.546617 CAATGTACAAACGCGCACTAAA 58.453 40.909 5.73 0.00 0.00 1.85
404 405 2.096169 CCAATGTACAAACGCGCACTAA 60.096 45.455 5.73 0.00 0.00 2.24
405 406 1.461512 CCAATGTACAAACGCGCACTA 59.538 47.619 5.73 0.00 0.00 2.74
406 407 0.237235 CCAATGTACAAACGCGCACT 59.763 50.000 5.73 0.00 0.00 4.40
407 408 0.727793 CCCAATGTACAAACGCGCAC 60.728 55.000 5.73 0.00 0.00 5.34
408 409 1.167155 ACCCAATGTACAAACGCGCA 61.167 50.000 5.73 0.00 0.00 6.09
409 410 0.727793 CACCCAATGTACAAACGCGC 60.728 55.000 5.73 0.00 0.00 6.86
410 411 0.869068 TCACCCAATGTACAAACGCG 59.131 50.000 3.53 3.53 0.00 6.01
411 412 2.550606 TCTTCACCCAATGTACAAACGC 59.449 45.455 0.00 0.00 0.00 4.84
412 413 4.822036 TTCTTCACCCAATGTACAAACG 57.178 40.909 0.00 0.00 0.00 3.60
413 414 9.705290 AATTTATTCTTCACCCAATGTACAAAC 57.295 29.630 0.00 0.00 0.00 2.93
431 432 5.616204 GCGGCGGGTGTAGAATAATTTATTC 60.616 44.000 17.69 17.69 43.77 1.75
432 433 4.214758 GCGGCGGGTGTAGAATAATTTATT 59.785 41.667 9.78 1.25 0.00 1.40
433 434 3.749609 GCGGCGGGTGTAGAATAATTTAT 59.250 43.478 9.78 0.00 0.00 1.40
434 435 3.132925 GCGGCGGGTGTAGAATAATTTA 58.867 45.455 9.78 0.00 0.00 1.40
435 436 1.944709 GCGGCGGGTGTAGAATAATTT 59.055 47.619 9.78 0.00 0.00 1.82
436 437 1.589803 GCGGCGGGTGTAGAATAATT 58.410 50.000 9.78 0.00 0.00 1.40
437 438 0.250166 GGCGGCGGGTGTAGAATAAT 60.250 55.000 9.78 0.00 0.00 1.28
438 439 1.144496 GGCGGCGGGTGTAGAATAA 59.856 57.895 9.78 0.00 0.00 1.40
439 440 2.816718 GGCGGCGGGTGTAGAATA 59.183 61.111 9.78 0.00 0.00 1.75
440 441 4.524318 CGGCGGCGGGTGTAGAAT 62.524 66.667 25.36 0.00 0.00 2.40
454 455 2.044888 TTCATTGTTTTCGCTTCGGC 57.955 45.000 0.00 0.00 37.65 5.54
455 456 3.121362 GCTTTTCATTGTTTTCGCTTCGG 60.121 43.478 0.00 0.00 0.00 4.30
456 457 3.121362 GGCTTTTCATTGTTTTCGCTTCG 60.121 43.478 0.00 0.00 0.00 3.79
457 458 4.051237 AGGCTTTTCATTGTTTTCGCTTC 58.949 39.130 0.00 0.00 0.00 3.86
458 459 4.058721 AGGCTTTTCATTGTTTTCGCTT 57.941 36.364 0.00 0.00 0.00 4.68
459 460 3.733443 AGGCTTTTCATTGTTTTCGCT 57.267 38.095 0.00 0.00 0.00 4.93
460 461 5.898630 TTTAGGCTTTTCATTGTTTTCGC 57.101 34.783 0.00 0.00 0.00 4.70
461 462 7.905126 AGTTTTTAGGCTTTTCATTGTTTTCG 58.095 30.769 0.00 0.00 0.00 3.46
464 465 9.884636 ACTTAGTTTTTAGGCTTTTCATTGTTT 57.115 25.926 0.00 0.00 0.00 2.83
465 466 9.884636 AACTTAGTTTTTAGGCTTTTCATTGTT 57.115 25.926 0.00 0.00 0.00 2.83
472 473 9.811995 CCAAAGTAACTTAGTTTTTAGGCTTTT 57.188 29.630 1.94 0.00 0.00 2.27
473 474 8.418662 CCCAAAGTAACTTAGTTTTTAGGCTTT 58.581 33.333 1.94 3.08 0.00 3.51
474 475 7.470981 GCCCAAAGTAACTTAGTTTTTAGGCTT 60.471 37.037 17.93 6.66 36.83 4.35
475 476 6.015688 GCCCAAAGTAACTTAGTTTTTAGGCT 60.016 38.462 17.93 0.00 36.83 4.58
476 477 6.015688 AGCCCAAAGTAACTTAGTTTTTAGGC 60.016 38.462 17.68 17.68 38.37 3.93
477 478 7.520451 AGCCCAAAGTAACTTAGTTTTTAGG 57.480 36.000 1.94 2.92 0.00 2.69
480 481 8.199449 GGTTTAGCCCAAAGTAACTTAGTTTTT 58.801 33.333 1.94 0.00 0.00 1.94
481 482 7.562454 AGGTTTAGCCCAAAGTAACTTAGTTTT 59.438 33.333 1.94 0.00 38.26 2.43
482 483 7.064866 AGGTTTAGCCCAAAGTAACTTAGTTT 58.935 34.615 1.94 0.00 38.26 2.66
483 484 6.607970 AGGTTTAGCCCAAAGTAACTTAGTT 58.392 36.000 2.32 2.32 38.26 2.24
484 485 6.196918 AGGTTTAGCCCAAAGTAACTTAGT 57.803 37.500 0.00 0.00 38.26 2.24
485 486 7.498239 GGATAGGTTTAGCCCAAAGTAACTTAG 59.502 40.741 0.00 0.00 38.26 2.18
486 487 7.037442 TGGATAGGTTTAGCCCAAAGTAACTTA 60.037 37.037 0.00 0.00 34.33 2.24
487 488 6.185511 GGATAGGTTTAGCCCAAAGTAACTT 58.814 40.000 0.00 0.00 38.26 2.66
488 489 5.252164 TGGATAGGTTTAGCCCAAAGTAACT 59.748 40.000 0.00 0.00 34.33 2.24
489 490 5.356190 GTGGATAGGTTTAGCCCAAAGTAAC 59.644 44.000 0.00 0.00 34.33 2.50
490 491 5.014333 TGTGGATAGGTTTAGCCCAAAGTAA 59.986 40.000 0.00 0.00 34.33 2.24
491 492 4.536888 TGTGGATAGGTTTAGCCCAAAGTA 59.463 41.667 0.00 0.00 34.33 2.24
492 493 3.332485 TGTGGATAGGTTTAGCCCAAAGT 59.668 43.478 0.00 0.00 34.33 2.66
493 494 3.694566 GTGTGGATAGGTTTAGCCCAAAG 59.305 47.826 0.00 0.00 34.33 2.77
494 495 3.692690 GTGTGGATAGGTTTAGCCCAAA 58.307 45.455 0.00 0.00 34.33 3.28
495 496 2.355310 CGTGTGGATAGGTTTAGCCCAA 60.355 50.000 0.00 0.00 34.33 4.12
496 497 1.208535 CGTGTGGATAGGTTTAGCCCA 59.791 52.381 0.00 0.00 34.33 5.36
497 498 1.949465 CGTGTGGATAGGTTTAGCCC 58.051 55.000 0.00 0.00 34.33 5.19
498 499 1.296727 GCGTGTGGATAGGTTTAGCC 58.703 55.000 0.00 0.00 35.85 3.93
499 500 0.928229 CGCGTGTGGATAGGTTTAGC 59.072 55.000 0.00 0.00 0.00 3.09
500 501 1.924524 CACGCGTGTGGATAGGTTTAG 59.075 52.381 30.50 0.00 42.59 1.85
501 502 1.999048 CACGCGTGTGGATAGGTTTA 58.001 50.000 30.50 0.00 42.59 2.01
512 513 4.771356 CGTCGGATCCACGCGTGT 62.771 66.667 34.81 20.11 0.00 4.49
526 527 1.817209 GGTGATGAGGAGGGTCGTC 59.183 63.158 0.00 0.00 33.66 4.20
529 530 0.390860 CATCGGTGATGAGGAGGGTC 59.609 60.000 0.45 0.00 42.09 4.46
540 541 2.404186 CGACCTCGGTCATCGGTGA 61.404 63.158 15.77 0.00 44.77 4.02
545 546 1.226717 GCAGACGACCTCGGTCATC 60.227 63.158 15.77 10.24 44.77 2.92
568 569 2.358737 CGTCCTCTGGCGGCTTTT 60.359 61.111 11.43 0.00 0.00 2.27
569 570 2.788191 CTTCGTCCTCTGGCGGCTTT 62.788 60.000 11.43 0.00 0.00 3.51
570 571 3.302347 CTTCGTCCTCTGGCGGCTT 62.302 63.158 11.43 0.00 0.00 4.35
577 578 0.967887 TCCTCTGCCTTCGTCCTCTG 60.968 60.000 0.00 0.00 0.00 3.35
589 590 1.134551 GTCATCAGGGAGTTCCTCTGC 60.135 57.143 10.17 0.00 46.12 4.26
591 592 1.479709 CGTCATCAGGGAGTTCCTCT 58.520 55.000 0.00 0.00 46.12 3.69
592 593 0.461961 CCGTCATCAGGGAGTTCCTC 59.538 60.000 0.00 0.00 46.12 3.71
605 606 0.984230 ATCTCACCAACACCCGTCAT 59.016 50.000 0.00 0.00 0.00 3.06
613 614 0.400213 AAAGGGCGATCTCACCAACA 59.600 50.000 0.00 0.00 0.00 3.33
614 615 1.087501 GAAAGGGCGATCTCACCAAC 58.912 55.000 0.00 0.00 0.00 3.77
619 620 1.573108 AGAAGGAAAGGGCGATCTCA 58.427 50.000 0.00 0.00 0.00 3.27
636 637 5.314529 TGAGTCGTTCTTTCTTCCTCTAGA 58.685 41.667 0.00 0.00 0.00 2.43
678 679 9.212641 CAGGTGGTCTGTAAATGATATTCTATG 57.787 37.037 0.00 0.00 38.64 2.23
696 697 5.847111 TGATATGTGTAGTACAGGTGGTC 57.153 43.478 2.39 0.09 43.80 4.02
889 893 4.845621 AGCATTAATTGATTGTTTGCGC 57.154 36.364 0.00 0.00 0.00 6.09
960 965 2.028112 TCTCTTCGTGGGGAGATGTTTG 60.028 50.000 0.00 0.00 34.19 2.93
984 989 1.781429 GTCATATAGAGTGTGCGCGTG 59.219 52.381 8.43 0.00 0.00 5.34
1007 1018 2.697751 AGGAGGAGAATGATCTTCACCG 59.302 50.000 12.27 0.00 44.39 4.94
1030 1047 0.597377 CAAAAGGGCGCAAGGACAAC 60.597 55.000 10.83 0.00 38.28 3.32
1031 1048 1.739049 CAAAAGGGCGCAAGGACAA 59.261 52.632 10.83 0.00 38.28 3.18
1032 1049 2.855514 GCAAAAGGGCGCAAGGACA 61.856 57.895 10.83 0.00 38.28 4.02
1248 1265 1.227999 CGAGTTGTGTGGCGTCCAAT 61.228 55.000 0.00 0.00 34.18 3.16
1300 1317 0.117140 TTCCTCTCCTGGCCAGAGAA 59.883 55.000 34.91 22.43 40.02 2.87
1398 1415 2.284552 ACCCCCGCAAATTGGCAT 60.285 55.556 5.49 0.00 0.00 4.40
1513 1539 6.765403 AGTGAATTAGCAGTAGTTTGTACCA 58.235 36.000 0.00 0.00 0.00 3.25
1515 1541 7.015877 GCAAGTGAATTAGCAGTAGTTTGTAC 58.984 38.462 0.00 0.00 0.00 2.90
1585 1613 2.237393 TTTTGTGTACGTACGGCCTT 57.763 45.000 21.06 0.09 0.00 4.35
1630 1658 2.282603 GTAGCGGGGTGGCCAAAA 60.283 61.111 7.24 0.00 0.00 2.44
1640 1668 3.181479 TGTGAAACTAGCTATGTAGCGGG 60.181 47.826 6.40 6.17 46.31 6.13
1695 1726 5.045215 TCGGCGGTGTACTCTAAATTATTG 58.955 41.667 7.21 0.00 0.00 1.90
1942 1978 1.966451 GGGAACTGCTCAACACCCG 60.966 63.158 0.00 0.00 0.00 5.28
1949 1985 4.892934 ACAAAGTAATTTGGGAACTGCTCA 59.107 37.500 18.88 0.00 36.30 4.26
1968 2004 9.747898 ACCTAATTTGATACCATGTAAGACAAA 57.252 29.630 0.00 0.00 0.00 2.83
1969 2005 9.747898 AACCTAATTTGATACCATGTAAGACAA 57.252 29.630 0.00 0.00 0.00 3.18
2065 2111 3.138798 GGCAGTAGCGAGGGTCGA 61.139 66.667 0.00 0.00 43.74 4.20
2068 2114 2.037367 TGAGGCAGTAGCGAGGGT 59.963 61.111 0.00 0.00 43.41 4.34
2136 2185 2.049985 GATCCGATCGGCGAGTGG 60.050 66.667 29.62 20.51 44.57 4.00
2226 2275 1.295423 CGTGGACCGAGGGAACATT 59.705 57.895 0.00 0.00 39.56 2.71
2227 2276 2.656069 CCGTGGACCGAGGGAACAT 61.656 63.158 0.00 0.00 39.56 2.71
2256 2305 2.261671 CCAAGACGACGTGGGAGG 59.738 66.667 4.58 0.00 40.91 4.30
2258 2307 3.998672 GGCCAAGACGACGTGGGA 61.999 66.667 19.53 0.00 43.88 4.37
2287 2384 3.876198 GCGGCGCACCATAGGTTG 61.876 66.667 29.21 0.00 31.02 3.77
2326 2472 1.523938 GTAGGGTTGATGAGGCGGC 60.524 63.158 0.00 0.00 0.00 6.53
2386 2532 2.570181 GCGCCGTAGTAGTGGTGT 59.430 61.111 0.00 0.00 38.05 4.16
2414 2560 3.537874 GGGCGCCGAGTAGGACAT 61.538 66.667 22.54 0.00 45.00 3.06
2481 2714 2.511373 GATCGCCGTGATGTGCCA 60.511 61.111 0.00 0.00 37.47 4.92


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.