Multiple sequence alignment - TraesCS7B01G388700

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G388700 chr7B 100.000 6389 0 0 1 6389 654954437 654948049 0.000000e+00 11799.0
1 TraesCS7B01G388700 chr7B 82.609 138 16 6 5993 6127 107602876 107603008 1.460000e-21 115.0
2 TraesCS7B01G388700 chr7B 80.247 162 23 4 5974 6127 243277165 243277325 5.240000e-21 113.0
3 TraesCS7B01G388700 chr7B 100.000 33 0 0 2744 2776 654951664 654951632 1.920000e-05 62.1
4 TraesCS7B01G388700 chr7B 100.000 33 0 0 2774 2806 654951694 654951662 1.920000e-05 62.1
5 TraesCS7B01G388700 chr4B 90.958 2234 125 35 577 2776 662144340 662146530 0.000000e+00 2935.0
6 TraesCS7B01G388700 chr4B 94.428 1651 32 17 3805 5410 662147575 662149210 0.000000e+00 2484.0
7 TraesCS7B01G388700 chr4B 89.151 1060 70 23 2774 3813 662146498 662147532 0.000000e+00 1279.0
8 TraesCS7B01G388700 chr4B 90.909 440 25 3 5407 5836 662153291 662153725 1.540000e-160 577.0
9 TraesCS7B01G388700 chr4B 92.157 153 9 2 6132 6282 662153976 662154127 5.020000e-51 213.0
10 TraesCS7B01G388700 chr4D 90.078 1935 143 20 846 2776 505998975 506000864 0.000000e+00 2464.0
11 TraesCS7B01G388700 chr4D 90.422 1232 80 13 3820 5037 506001923 506003130 0.000000e+00 1587.0
12 TraesCS7B01G388700 chr4D 88.973 1052 101 10 2774 3813 506000832 506001880 0.000000e+00 1286.0
13 TraesCS7B01G388700 chr4D 79.570 372 36 25 185 530 505998098 505998455 4.980000e-56 230.0
14 TraesCS7B01G388700 chr4D 93.082 159 8 1 5203 5361 506003305 506003460 4.980000e-56 230.0
15 TraesCS7B01G388700 chr5A 89.646 1922 136 28 862 2776 702165414 702167279 0.000000e+00 2388.0
16 TraesCS7B01G388700 chr5A 84.250 1054 133 21 2775 3813 702167249 702168284 0.000000e+00 996.0
17 TraesCS7B01G388700 chr5A 90.000 200 13 3 5166 5361 702172457 702172653 1.060000e-62 252.0
18 TraesCS7B01G388700 chr5A 83.214 280 20 14 5100 5361 702169593 702169863 1.390000e-56 231.0
19 TraesCS7B01G388700 chr7D 79.147 211 31 7 5927 6127 458369271 458369064 4.020000e-27 134.0
20 TraesCS7B01G388700 chr3D 78.095 210 31 9 5929 6127 296034770 296034975 1.130000e-22 119.0
21 TraesCS7B01G388700 chr3B 83.333 120 18 2 6010 6127 14708446 14708565 6.770000e-20 110.0
22 TraesCS7B01G388700 chr3B 82.443 131 15 6 5993 6119 390443605 390443731 2.440000e-19 108.0
23 TraesCS7B01G388700 chr5D 82.222 135 14 9 5998 6128 65857107 65856979 2.440000e-19 108.0
24 TraesCS7B01G388700 chr2A 84.545 110 16 1 5973 6082 124403441 124403549 2.440000e-19 108.0
25 TraesCS7B01G388700 chr2A 81.295 139 18 6 5990 6127 632948160 632948291 8.760000e-19 106.0
26 TraesCS7B01G388700 chr5B 92.857 42 2 1 5678 5718 95854277 95854318 6.920000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G388700 chr7B 654948049 654954437 6388 True 3974.400000 11799 100.000000 1 6389 3 chr7B.!!$R1 6388
1 TraesCS7B01G388700 chr4B 662144340 662149210 4870 False 2232.666667 2935 91.512333 577 5410 3 chr4B.!!$F1 4833
2 TraesCS7B01G388700 chr4B 662153291 662154127 836 False 395.000000 577 91.533000 5407 6282 2 chr4B.!!$F2 875
3 TraesCS7B01G388700 chr4D 505998098 506003460 5362 False 1159.400000 2464 88.425000 185 5361 5 chr4D.!!$F1 5176
4 TraesCS7B01G388700 chr5A 702165414 702172653 7239 False 966.750000 2388 86.777500 862 5361 4 chr5A.!!$F1 4499

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
165 166 0.037975 GGGGACGCGTAGACAAGAAA 60.038 55.0 13.97 0.0 0.00 2.52 F
341 343 0.039437 ACCGACGCAACAGACTACAG 60.039 55.0 0.00 0.0 0.00 2.74 F
1149 1433 0.108396 CATGTCGGCCACCATATCCA 59.892 55.0 2.24 0.0 0.00 3.41 F
1175 1459 0.390735 CCTTGGCCGTACAGTGGTAC 60.391 60.0 0.00 0.0 45.18 3.34 F
3116 3413 0.392729 TTGGTCGTTGGACGGTGTTT 60.393 50.0 0.27 0.0 44.39 2.83 F
3242 3539 0.389025 TGTGCAAGAGAAGCTCGACA 59.611 50.0 0.00 0.0 35.36 4.35 F
4915 8115 0.246635 AAGTACAAGCGACGGAGCAT 59.753 50.0 7.12 0.0 40.15 3.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1916 2209 0.104777 TCCAGAGCCATCCCTAGCAT 60.105 55.0 0.00 0.0 0.00 3.79 R
2320 2616 0.532862 CGCAAGCATACTGGGGGTAG 60.533 60.0 0.00 0.0 33.51 3.18 R
3071 3367 0.319813 AGCCAGCGTGCAATTTTTCC 60.320 50.0 0.00 0.0 0.00 3.13 R
3157 3454 1.118838 CTTCCTAGCCTCCCTCACAG 58.881 60.0 0.00 0.0 0.00 3.66 R
4644 5192 0.038744 CCTCTCCAGTGGCACCATTT 59.961 55.0 15.27 0.0 0.00 2.32 R
5184 8426 0.875059 CGTCCAAGCCCTTGTTCTTC 59.125 55.0 7.21 0.0 38.85 2.87 R
6356 9790 0.038159 AACTGTGTCTCGCTGGTAGC 60.038 55.0 0.00 0.0 38.02 3.58 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 9.855021 ATTGCGTATAAAAACTTGCTAAGATTT 57.145 25.926 3.37 1.84 35.35 2.17
27 28 8.667987 TGCGTATAAAAACTTGCTAAGATTTG 57.332 30.769 3.37 0.00 34.30 2.32
28 29 8.293867 TGCGTATAAAAACTTGCTAAGATTTGT 58.706 29.630 3.37 5.33 34.30 2.83
29 30 9.763465 GCGTATAAAAACTTGCTAAGATTTGTA 57.237 29.630 3.37 4.65 34.30 2.41
35 36 6.759497 AACTTGCTAAGATTTGTATGGACC 57.241 37.500 3.37 0.00 0.00 4.46
36 37 5.815581 ACTTGCTAAGATTTGTATGGACCA 58.184 37.500 0.00 0.00 0.00 4.02
37 38 6.245408 ACTTGCTAAGATTTGTATGGACCAA 58.755 36.000 0.00 0.00 0.00 3.67
38 39 6.891908 ACTTGCTAAGATTTGTATGGACCAAT 59.108 34.615 0.00 0.00 0.00 3.16
39 40 6.698008 TGCTAAGATTTGTATGGACCAATG 57.302 37.500 0.00 0.00 0.00 2.82
40 41 6.186957 TGCTAAGATTTGTATGGACCAATGT 58.813 36.000 0.00 0.00 0.00 2.71
41 42 7.342581 TGCTAAGATTTGTATGGACCAATGTA 58.657 34.615 0.00 0.00 0.00 2.29
42 43 7.831690 TGCTAAGATTTGTATGGACCAATGTAA 59.168 33.333 0.00 0.00 0.00 2.41
43 44 8.682710 GCTAAGATTTGTATGGACCAATGTAAA 58.317 33.333 0.00 0.00 0.00 2.01
46 47 8.821686 AGATTTGTATGGACCAATGTAAATCA 57.178 30.769 23.86 6.80 36.35 2.57
47 48 8.686334 AGATTTGTATGGACCAATGTAAATCAC 58.314 33.333 23.86 10.54 36.35 3.06
48 49 7.767250 TTTGTATGGACCAATGTAAATCACA 57.233 32.000 0.00 0.00 42.69 3.58
88 89 8.523915 AAATATTGCAATTGTCTGTCTATCCA 57.476 30.769 18.75 0.00 0.00 3.41
89 90 7.741027 ATATTGCAATTGTCTGTCTATCCAG 57.259 36.000 18.75 0.00 0.00 3.86
90 91 4.558226 TGCAATTGTCTGTCTATCCAGT 57.442 40.909 7.40 0.00 34.02 4.00
91 92 4.910195 TGCAATTGTCTGTCTATCCAGTT 58.090 39.130 7.40 0.00 34.02 3.16
92 93 6.048732 TGCAATTGTCTGTCTATCCAGTTA 57.951 37.500 7.40 0.00 34.02 2.24
93 94 6.472016 TGCAATTGTCTGTCTATCCAGTTAA 58.528 36.000 7.40 0.00 34.02 2.01
94 95 6.595326 TGCAATTGTCTGTCTATCCAGTTAAG 59.405 38.462 7.40 0.00 34.02 1.85
95 96 6.818644 GCAATTGTCTGTCTATCCAGTTAAGA 59.181 38.462 7.40 0.00 34.02 2.10
96 97 7.497249 GCAATTGTCTGTCTATCCAGTTAAGAT 59.503 37.037 7.40 0.00 34.02 2.40
97 98 9.039870 CAATTGTCTGTCTATCCAGTTAAGATC 57.960 37.037 0.00 0.00 34.02 2.75
98 99 7.718334 TTGTCTGTCTATCCAGTTAAGATCA 57.282 36.000 0.00 0.00 34.02 2.92
99 100 7.904558 TGTCTGTCTATCCAGTTAAGATCAT 57.095 36.000 0.00 0.00 34.02 2.45
100 101 8.996651 TGTCTGTCTATCCAGTTAAGATCATA 57.003 34.615 0.00 0.00 34.02 2.15
101 102 9.421399 TGTCTGTCTATCCAGTTAAGATCATAA 57.579 33.333 0.00 0.00 34.02 1.90
111 112 9.929180 TCCAGTTAAGATCATAATAAGATTCGG 57.071 33.333 0.00 0.00 0.00 4.30
112 113 9.712305 CCAGTTAAGATCATAATAAGATTCGGT 57.288 33.333 0.00 0.00 0.00 4.69
114 115 9.712305 AGTTAAGATCATAATAAGATTCGGTGG 57.288 33.333 0.00 0.00 0.00 4.61
115 116 8.443937 GTTAAGATCATAATAAGATTCGGTGGC 58.556 37.037 0.00 0.00 0.00 5.01
116 117 6.365970 AGATCATAATAAGATTCGGTGGCT 57.634 37.500 0.00 0.00 0.00 4.75
117 118 6.169094 AGATCATAATAAGATTCGGTGGCTG 58.831 40.000 0.00 0.00 0.00 4.85
118 119 4.641396 TCATAATAAGATTCGGTGGCTGG 58.359 43.478 0.00 0.00 0.00 4.85
119 120 2.348411 AATAAGATTCGGTGGCTGGG 57.652 50.000 0.00 0.00 0.00 4.45
120 121 0.179018 ATAAGATTCGGTGGCTGGGC 60.179 55.000 0.00 0.00 0.00 5.36
163 164 3.281240 GGGGACGCGTAGACAAGA 58.719 61.111 13.97 0.00 0.00 3.02
164 165 1.588082 GGGGACGCGTAGACAAGAA 59.412 57.895 13.97 0.00 0.00 2.52
165 166 0.037975 GGGGACGCGTAGACAAGAAA 60.038 55.000 13.97 0.00 0.00 2.52
166 167 1.606224 GGGGACGCGTAGACAAGAAAA 60.606 52.381 13.97 0.00 0.00 2.29
167 168 1.725164 GGGACGCGTAGACAAGAAAAG 59.275 52.381 13.97 0.00 0.00 2.27
168 169 2.608752 GGGACGCGTAGACAAGAAAAGA 60.609 50.000 13.97 0.00 0.00 2.52
169 170 3.054878 GGACGCGTAGACAAGAAAAGAA 58.945 45.455 13.97 0.00 0.00 2.52
170 171 3.492011 GGACGCGTAGACAAGAAAAGAAA 59.508 43.478 13.97 0.00 0.00 2.52
171 172 4.376109 GGACGCGTAGACAAGAAAAGAAAG 60.376 45.833 13.97 0.00 0.00 2.62
172 173 4.365723 ACGCGTAGACAAGAAAAGAAAGA 58.634 39.130 11.67 0.00 0.00 2.52
173 174 4.807304 ACGCGTAGACAAGAAAAGAAAGAA 59.193 37.500 11.67 0.00 0.00 2.52
174 175 5.292589 ACGCGTAGACAAGAAAAGAAAGAAA 59.707 36.000 11.67 0.00 0.00 2.52
175 176 5.841296 CGCGTAGACAAGAAAAGAAAGAAAG 59.159 40.000 0.00 0.00 0.00 2.62
176 177 6.292168 CGCGTAGACAAGAAAAGAAAGAAAGA 60.292 38.462 0.00 0.00 0.00 2.52
177 178 6.846786 GCGTAGACAAGAAAAGAAAGAAAGAC 59.153 38.462 0.00 0.00 0.00 3.01
178 179 7.465513 GCGTAGACAAGAAAAGAAAGAAAGACA 60.466 37.037 0.00 0.00 0.00 3.41
179 180 8.388103 CGTAGACAAGAAAAGAAAGAAAGACAA 58.612 33.333 0.00 0.00 0.00 3.18
180 181 9.491934 GTAGACAAGAAAAGAAAGAAAGACAAC 57.508 33.333 0.00 0.00 0.00 3.32
181 182 7.539436 AGACAAGAAAAGAAAGAAAGACAACC 58.461 34.615 0.00 0.00 0.00 3.77
182 183 6.322491 ACAAGAAAAGAAAGAAAGACAACCG 58.678 36.000 0.00 0.00 0.00 4.44
183 184 4.921547 AGAAAAGAAAGAAAGACAACCGC 58.078 39.130 0.00 0.00 0.00 5.68
184 185 4.398044 AGAAAAGAAAGAAAGACAACCGCA 59.602 37.500 0.00 0.00 0.00 5.69
185 186 3.971032 AAGAAAGAAAGACAACCGCAG 57.029 42.857 0.00 0.00 0.00 5.18
186 187 3.194005 AGAAAGAAAGACAACCGCAGA 57.806 42.857 0.00 0.00 0.00 4.26
187 188 3.541632 AGAAAGAAAGACAACCGCAGAA 58.458 40.909 0.00 0.00 0.00 3.02
188 189 3.945285 AGAAAGAAAGACAACCGCAGAAA 59.055 39.130 0.00 0.00 0.00 2.52
189 190 4.398044 AGAAAGAAAGACAACCGCAGAAAA 59.602 37.500 0.00 0.00 0.00 2.29
190 191 4.712122 AAGAAAGACAACCGCAGAAAAA 57.288 36.364 0.00 0.00 0.00 1.94
218 219 3.222603 GAAAGAAAGAGGCTGGTGGAAA 58.777 45.455 0.00 0.00 0.00 3.13
221 222 1.172812 AAAGAGGCTGGTGGAAACGC 61.173 55.000 0.00 0.00 41.20 4.84
229 230 4.792087 GTGGAAACGCCCAGAAGA 57.208 55.556 0.00 0.00 36.78 2.87
243 244 2.098117 CCAGAAGAAATGCGAATGACCC 59.902 50.000 0.00 0.00 0.00 4.46
244 245 2.098117 CAGAAGAAATGCGAATGACCCC 59.902 50.000 0.00 0.00 0.00 4.95
245 246 2.025887 AGAAGAAATGCGAATGACCCCT 60.026 45.455 0.00 0.00 0.00 4.79
246 247 1.755179 AGAAATGCGAATGACCCCTG 58.245 50.000 0.00 0.00 0.00 4.45
247 248 1.004745 AGAAATGCGAATGACCCCTGT 59.995 47.619 0.00 0.00 0.00 4.00
265 266 0.102663 GTCGGGTCGAGAAATCTCCC 59.897 60.000 4.90 0.77 39.79 4.30
269 270 1.413077 GGGTCGAGAAATCTCCCGAAT 59.587 52.381 4.90 0.00 39.79 3.34
270 271 2.474816 GGTCGAGAAATCTCCCGAATG 58.525 52.381 4.90 0.00 39.79 2.67
274 275 2.488952 GAGAAATCTCCCGAATGCTCC 58.511 52.381 0.00 0.00 37.02 4.70
284 285 4.129148 AATGCTCCCCCGGCTTCC 62.129 66.667 0.00 0.00 0.00 3.46
309 311 1.946267 CGCACCCGCATAAATACCC 59.054 57.895 0.00 0.00 38.40 3.69
310 312 1.837538 CGCACCCGCATAAATACCCG 61.838 60.000 0.00 0.00 38.40 5.28
313 315 1.969589 CCCGCATAAATACCCGCCC 60.970 63.158 0.00 0.00 0.00 6.13
314 316 2.322081 CCGCATAAATACCCGCCCG 61.322 63.158 0.00 0.00 0.00 6.13
317 319 1.072505 CATAAATACCCGCCCGCCT 59.927 57.895 0.00 0.00 0.00 5.52
319 321 2.120737 ATAAATACCCGCCCGCCTCC 62.121 60.000 0.00 0.00 0.00 4.30
337 339 1.081641 CGTACCGACGCAACAGACT 60.082 57.895 0.00 0.00 43.21 3.24
338 340 0.166597 CGTACCGACGCAACAGACTA 59.833 55.000 0.00 0.00 43.21 2.59
339 341 1.611043 GTACCGACGCAACAGACTAC 58.389 55.000 0.00 0.00 0.00 2.73
340 342 1.069022 GTACCGACGCAACAGACTACA 60.069 52.381 0.00 0.00 0.00 2.74
341 343 0.039437 ACCGACGCAACAGACTACAG 60.039 55.000 0.00 0.00 0.00 2.74
342 344 0.240145 CCGACGCAACAGACTACAGA 59.760 55.000 0.00 0.00 0.00 3.41
343 345 1.328439 CGACGCAACAGACTACAGAC 58.672 55.000 0.00 0.00 0.00 3.51
359 361 5.598830 ACTACAGACAACAGAGGAAGAAGAA 59.401 40.000 0.00 0.00 0.00 2.52
364 366 4.967036 ACAACAGAGGAAGAAGAAGAAGG 58.033 43.478 0.00 0.00 0.00 3.46
367 369 3.837731 ACAGAGGAAGAAGAAGAAGGAGG 59.162 47.826 0.00 0.00 0.00 4.30
375 404 5.937975 AGAAGAAGAAGGAGGAGAATCAG 57.062 43.478 0.00 0.00 36.25 2.90
411 440 1.960763 CGCCGGCAGCTGCATATTA 60.961 57.895 37.63 0.00 44.36 0.98
420 449 1.165907 GCTGCATATTAGCCCGCACA 61.166 55.000 0.00 0.00 35.15 4.57
425 454 0.544223 ATATTAGCCCGCACACACCA 59.456 50.000 0.00 0.00 0.00 4.17
427 456 0.323360 ATTAGCCCGCACACACCATT 60.323 50.000 0.00 0.00 0.00 3.16
433 462 1.669502 CCCGCACACACCATTGATTTG 60.670 52.381 0.00 0.00 0.00 2.32
435 464 2.318578 CGCACACACCATTGATTTGTC 58.681 47.619 0.00 0.00 0.00 3.18
440 469 0.817013 CACCATTGATTTGTCCCGGG 59.183 55.000 16.85 16.85 0.00 5.73
445 474 4.419921 GATTTGTCCCGGGCCGGT 62.420 66.667 40.30 23.61 46.80 5.28
465 494 0.175989 GGTGGTTCCTCGGATCAGAC 59.824 60.000 0.00 0.00 0.00 3.51
472 501 1.215423 TCCTCGGATCAGACCAGATCA 59.785 52.381 6.32 0.00 44.89 2.92
494 523 4.878878 GGATCGGATCCCCACAAC 57.121 61.111 23.82 0.00 43.88 3.32
495 524 2.221918 GGATCGGATCCCCACAACT 58.778 57.895 23.82 0.00 43.88 3.16
496 525 0.179045 GGATCGGATCCCCACAACTG 60.179 60.000 23.82 0.00 43.88 3.16
497 526 0.541863 GATCGGATCCCCACAACTGT 59.458 55.000 6.06 0.00 0.00 3.55
498 527 1.760613 GATCGGATCCCCACAACTGTA 59.239 52.381 6.06 0.00 0.00 2.74
499 528 1.646912 TCGGATCCCCACAACTGTAA 58.353 50.000 6.06 0.00 0.00 2.41
500 529 1.979308 TCGGATCCCCACAACTGTAAA 59.021 47.619 6.06 0.00 0.00 2.01
502 531 2.551287 CGGATCCCCACAACTGTAAACA 60.551 50.000 6.06 0.00 0.00 2.83
503 532 2.817844 GGATCCCCACAACTGTAAACAC 59.182 50.000 0.00 0.00 0.00 3.32
505 534 1.133730 TCCCCACAACTGTAAACACCC 60.134 52.381 0.00 0.00 0.00 4.61
506 535 1.324383 CCCACAACTGTAAACACCCC 58.676 55.000 0.00 0.00 0.00 4.95
530 559 1.199615 CTTCTCTTCACCTCCTCCCC 58.800 60.000 0.00 0.00 0.00 4.81
531 560 0.491823 TTCTCTTCACCTCCTCCCCA 59.508 55.000 0.00 0.00 0.00 4.96
532 561 0.719015 TCTCTTCACCTCCTCCCCAT 59.281 55.000 0.00 0.00 0.00 4.00
533 562 1.081174 TCTCTTCACCTCCTCCCCATT 59.919 52.381 0.00 0.00 0.00 3.16
534 563 1.918957 CTCTTCACCTCCTCCCCATTT 59.081 52.381 0.00 0.00 0.00 2.32
535 564 2.310052 CTCTTCACCTCCTCCCCATTTT 59.690 50.000 0.00 0.00 0.00 1.82
536 565 3.523564 CTCTTCACCTCCTCCCCATTTTA 59.476 47.826 0.00 0.00 0.00 1.52
537 566 4.119155 TCTTCACCTCCTCCCCATTTTAT 58.881 43.478 0.00 0.00 0.00 1.40
538 567 5.293643 TCTTCACCTCCTCCCCATTTTATA 58.706 41.667 0.00 0.00 0.00 0.98
539 568 5.917087 TCTTCACCTCCTCCCCATTTTATAT 59.083 40.000 0.00 0.00 0.00 0.86
540 569 7.086260 TCTTCACCTCCTCCCCATTTTATATA 58.914 38.462 0.00 0.00 0.00 0.86
541 570 7.574750 TCTTCACCTCCTCCCCATTTTATATAA 59.425 37.037 0.00 0.00 0.00 0.98
542 571 7.905144 TCACCTCCTCCCCATTTTATATAAT 57.095 36.000 0.00 0.00 0.00 1.28
543 572 7.928873 TCACCTCCTCCCCATTTTATATAATC 58.071 38.462 0.00 0.00 0.00 1.75
573 776 1.021390 ATGCTGCGTCAGGCTGTTAC 61.021 55.000 15.27 5.28 44.05 2.50
574 777 2.391389 GCTGCGTCAGGCTGTTACC 61.391 63.158 15.27 2.57 44.05 2.85
582 803 4.739735 GCGTCAGGCTGTTACCATAAGTAT 60.740 45.833 15.27 0.00 39.11 2.12
589 810 8.535335 CAGGCTGTTACCATAAGTATATCAGAT 58.465 37.037 6.28 0.00 31.76 2.90
618 843 2.393271 AGCCTTGTGAATCCTTCTCG 57.607 50.000 0.00 0.00 0.00 4.04
634 859 2.249413 CTCGCCATTGCCTCTCACCT 62.249 60.000 0.00 0.00 0.00 4.00
635 860 0.975556 TCGCCATTGCCTCTCACCTA 60.976 55.000 0.00 0.00 0.00 3.08
636 861 0.811616 CGCCATTGCCTCTCACCTAC 60.812 60.000 0.00 0.00 0.00 3.18
637 862 0.464554 GCCATTGCCTCTCACCTACC 60.465 60.000 0.00 0.00 0.00 3.18
640 865 0.543749 ATTGCCTCTCACCTACCTGC 59.456 55.000 0.00 0.00 0.00 4.85
645 870 3.165875 GCCTCTCACCTACCTGCATATA 58.834 50.000 0.00 0.00 0.00 0.86
649 874 5.247110 CCTCTCACCTACCTGCATATATTGT 59.753 44.000 0.00 0.00 0.00 2.71
658 883 9.507329 CCTACCTGCATATATTGTGACTAATTT 57.493 33.333 0.00 0.00 0.00 1.82
676 901 9.952188 GACTAATTTACTGATAAATCAAAGGCC 57.048 33.333 0.00 0.00 39.61 5.19
677 902 8.914011 ACTAATTTACTGATAAATCAAAGGCCC 58.086 33.333 0.00 0.00 39.61 5.80
678 903 7.978099 AATTTACTGATAAATCAAAGGCCCT 57.022 32.000 0.00 0.00 39.61 5.19
679 904 6.773976 TTTACTGATAAATCAAAGGCCCTG 57.226 37.500 0.00 0.00 36.18 4.45
680 905 4.322057 ACTGATAAATCAAAGGCCCTGT 57.678 40.909 0.00 0.00 36.18 4.00
681 906 4.273318 ACTGATAAATCAAAGGCCCTGTC 58.727 43.478 0.00 0.00 36.18 3.51
682 907 3.631250 TGATAAATCAAAGGCCCTGTCC 58.369 45.455 0.00 0.00 33.08 4.02
683 908 2.525105 TAAATCAAAGGCCCTGTCCC 57.475 50.000 0.00 0.00 0.00 4.46
684 909 0.786435 AAATCAAAGGCCCTGTCCCT 59.214 50.000 0.00 0.00 0.00 4.20
685 910 1.681229 AATCAAAGGCCCTGTCCCTA 58.319 50.000 0.00 0.00 30.93 3.53
698 923 3.441572 CCTGTCCCTATTGCAAACTCTTG 59.558 47.826 1.71 0.00 35.49 3.02
747 987 1.212935 ACAATCTATGCACTGTCCCCC 59.787 52.381 0.00 0.00 0.00 5.40
759 999 2.158579 ACTGTCCCCCGTTGTTTACAAT 60.159 45.455 0.00 0.00 38.24 2.71
774 1014 8.539674 GTTGTTTACAATGTGTCAAATCCTTTC 58.460 33.333 0.00 0.00 38.24 2.62
775 1015 7.776107 TGTTTACAATGTGTCAAATCCTTTCA 58.224 30.769 0.00 0.00 0.00 2.69
776 1016 8.420222 TGTTTACAATGTGTCAAATCCTTTCAT 58.580 29.630 0.00 0.00 0.00 2.57
777 1017 8.702438 GTTTACAATGTGTCAAATCCTTTCATG 58.298 33.333 0.00 0.00 0.00 3.07
778 1018 6.409524 ACAATGTGTCAAATCCTTTCATGT 57.590 33.333 0.00 0.00 0.00 3.21
779 1019 6.819284 ACAATGTGTCAAATCCTTTCATGTT 58.181 32.000 0.00 0.00 0.00 2.71
780 1020 7.274447 ACAATGTGTCAAATCCTTTCATGTTT 58.726 30.769 0.00 0.00 0.00 2.83
802 1042 3.197766 TCATCCAACCTACCATGTCACTC 59.802 47.826 0.00 0.00 0.00 3.51
808 1052 0.817654 CTACCATGTCACTCAGCGGA 59.182 55.000 0.00 0.00 0.00 5.54
827 1071 1.001706 GACGGGTGTTCTGCTTTTTCC 60.002 52.381 0.00 0.00 0.00 3.13
878 1155 6.831353 TGTATAAAAACATGGACCCTGTATGG 59.169 38.462 2.52 0.00 0.00 2.74
918 1195 8.627208 ATCTGTATTTCTTCTTCTTTCTTGCA 57.373 30.769 0.00 0.00 0.00 4.08
919 1196 8.092521 TCTGTATTTCTTCTTCTTTCTTGCAG 57.907 34.615 0.00 0.00 0.00 4.41
920 1197 6.672147 TGTATTTCTTCTTCTTTCTTGCAGC 58.328 36.000 0.00 0.00 0.00 5.25
941 1218 2.484742 TGCAGACATCACAAGAGCAT 57.515 45.000 0.00 0.00 0.00 3.79
943 1220 3.941573 TGCAGACATCACAAGAGCATAA 58.058 40.909 0.00 0.00 0.00 1.90
948 1227 5.236695 CAGACATCACAAGAGCATAATCTGG 59.763 44.000 0.00 0.00 0.00 3.86
950 1229 5.503927 ACATCACAAGAGCATAATCTGGTT 58.496 37.500 0.00 0.00 30.67 3.67
951 1230 5.356190 ACATCACAAGAGCATAATCTGGTTG 59.644 40.000 0.00 0.00 30.67 3.77
968 1247 2.554344 GGTTGACAGACCCAGCCATTTA 60.554 50.000 0.00 0.00 35.35 1.40
973 1252 2.092212 ACAGACCCAGCCATTTATCCTG 60.092 50.000 0.00 0.00 0.00 3.86
1057 1338 4.904251 ACTCCTCATACTACAGGCATCATT 59.096 41.667 0.00 0.00 0.00 2.57
1072 1353 5.369110 AGGCATCATTCTCCCTATCCATATC 59.631 44.000 0.00 0.00 0.00 1.63
1148 1432 0.606401 CCATGTCGGCCACCATATCC 60.606 60.000 2.24 0.00 0.00 2.59
1149 1433 0.108396 CATGTCGGCCACCATATCCA 59.892 55.000 2.24 0.00 0.00 3.41
1150 1434 1.067295 ATGTCGGCCACCATATCCAT 58.933 50.000 2.24 0.00 0.00 3.41
1151 1435 1.723288 TGTCGGCCACCATATCCATA 58.277 50.000 2.24 0.00 0.00 2.74
1152 1436 2.265367 TGTCGGCCACCATATCCATAT 58.735 47.619 2.24 0.00 0.00 1.78
1153 1437 2.027285 TGTCGGCCACCATATCCATATG 60.027 50.000 2.24 0.00 39.80 1.78
1175 1459 0.390735 CCTTGGCCGTACAGTGGTAC 60.391 60.000 0.00 0.00 45.18 3.34
1279 1563 0.897621 CCCATTGCCCCAAGAACTTC 59.102 55.000 0.00 0.00 0.00 3.01
1280 1564 0.897621 CCATTGCCCCAAGAACTTCC 59.102 55.000 0.00 0.00 0.00 3.46
1281 1565 1.631405 CATTGCCCCAAGAACTTCCA 58.369 50.000 0.00 0.00 0.00 3.53
1373 1660 2.728460 TTTGGCCCACTCCCACCATG 62.728 60.000 0.00 0.00 30.65 3.66
1624 1917 6.017400 ACATGAAAGACAACAAGGCTAATG 57.983 37.500 0.00 0.00 30.53 1.90
1638 1931 5.636903 AGGCTAATGATGGAAGAAGCTTA 57.363 39.130 0.00 0.00 0.00 3.09
1654 1947 2.027653 AGCTTAGAGTTTCCACCTCAGC 60.028 50.000 0.00 0.00 31.52 4.26
1701 1994 1.039856 GAGAGAGGGCAGAGGATGTC 58.960 60.000 0.00 0.00 0.00 3.06
1848 2141 0.610174 AGAGCACGCAAGAAGATCCA 59.390 50.000 0.00 0.00 43.62 3.41
1857 2150 1.065854 CAAGAAGATCCACCTTCGCCT 60.066 52.381 0.00 0.00 45.32 5.52
1869 2162 4.054671 CACCTTCGCCTAAGATCAAGATC 58.945 47.826 1.81 1.81 37.38 2.75
1908 2201 7.283807 TGGTTTGGAAATGATAGTCATGATCAG 59.716 37.037 0.00 0.00 37.15 2.90
1916 2209 5.543020 ATGATAGTCATGATCAGAAGCCTGA 59.457 40.000 0.00 0.00 43.41 3.86
1951 2244 4.083057 GCTCTGGAGAACAAAATGGAAGAC 60.083 45.833 1.35 0.00 0.00 3.01
1961 2254 4.128580 TGGAAGACCATCAGCGGA 57.871 55.556 0.00 0.00 41.77 5.54
1997 2290 3.002277 CTGAGCATCGGCATGACAT 57.998 52.632 0.00 0.00 44.61 3.06
2013 2306 3.411446 TGACATGACAGTGGATGGAAAC 58.589 45.455 0.00 0.51 0.00 2.78
2038 2331 2.350895 CCATCCCAGTTGTGCCGA 59.649 61.111 0.00 0.00 0.00 5.54
2051 2344 2.028130 TGTGCCGAAGAAACCAAACAT 58.972 42.857 0.00 0.00 0.00 2.71
2094 2390 1.028905 TTGTGCCGGAGAAACCAAAG 58.971 50.000 5.05 0.00 38.90 2.77
2121 2417 4.822350 GGGAATGAACCTGCTACTATTTCC 59.178 45.833 0.00 0.00 0.00 3.13
2159 2455 3.681897 CAGGATGTTGAGAAGAAGGTTCG 59.318 47.826 0.00 0.00 0.00 3.95
2296 2592 7.992180 AGTAAGAAAAGCAACAATGTTGAAG 57.008 32.000 28.10 3.94 0.00 3.02
2328 2624 1.154430 AGCCTTCAAAACTACCCCCA 58.846 50.000 0.00 0.00 0.00 4.96
2423 2719 5.740290 ACGAGGAAGGTATCTGAAAAAGA 57.260 39.130 0.00 0.00 39.94 2.52
2424 2720 5.480205 ACGAGGAAGGTATCTGAAAAAGAC 58.520 41.667 0.00 0.00 37.88 3.01
2433 2729 7.234355 AGGTATCTGAAAAAGACAAGGATGTT 58.766 34.615 0.00 0.00 40.74 2.71
2497 2793 6.214412 AGAACATCAGAAAGAGGGTAAGATGT 59.786 38.462 0.00 0.00 44.41 3.06
2557 2853 2.916934 ACAGGGCCTAGGAATGTAACAA 59.083 45.455 14.75 0.00 0.00 2.83
2766 3062 9.733556 TTAGCCTGTGAAATAAAGTTATCAGAA 57.266 29.630 0.00 0.00 0.00 3.02
2767 3063 8.045176 AGCCTGTGAAATAAAGTTATCAGAAC 57.955 34.615 0.00 0.00 0.00 3.01
2768 3064 7.121315 AGCCTGTGAAATAAAGTTATCAGAACC 59.879 37.037 0.00 0.00 0.00 3.62
2769 3065 7.094377 GCCTGTGAAATAAAGTTATCAGAACCA 60.094 37.037 0.00 0.00 0.00 3.67
2770 3066 8.454106 CCTGTGAAATAAAGTTATCAGAACCAG 58.546 37.037 0.00 0.00 0.00 4.00
2771 3067 9.219603 CTGTGAAATAAAGTTATCAGAACCAGA 57.780 33.333 0.00 0.00 0.00 3.86
2772 3068 9.739276 TGTGAAATAAAGTTATCAGAACCAGAT 57.261 29.630 0.00 0.00 0.00 2.90
2773 3069 9.994432 GTGAAATAAAGTTATCAGAACCAGATG 57.006 33.333 0.00 0.00 0.00 2.90
2774 3070 8.677300 TGAAATAAAGTTATCAGAACCAGATGC 58.323 33.333 0.00 0.00 0.00 3.91
2775 3071 7.573968 AATAAAGTTATCAGAACCAGATGCC 57.426 36.000 0.00 0.00 0.00 4.40
2776 3072 4.851639 AAGTTATCAGAACCAGATGCCT 57.148 40.909 0.00 0.00 0.00 4.75
2777 3073 4.148128 AGTTATCAGAACCAGATGCCTG 57.852 45.455 0.00 0.00 40.09 4.85
2778 3074 3.521126 AGTTATCAGAACCAGATGCCTGT 59.479 43.478 0.00 0.00 38.74 4.00
2779 3075 2.414994 ATCAGAACCAGATGCCTGTG 57.585 50.000 0.00 0.00 38.74 3.66
2780 3076 1.351076 TCAGAACCAGATGCCTGTGA 58.649 50.000 0.00 0.00 38.74 3.58
2781 3077 1.699083 TCAGAACCAGATGCCTGTGAA 59.301 47.619 0.00 0.00 38.74 3.18
2782 3078 2.106338 TCAGAACCAGATGCCTGTGAAA 59.894 45.455 0.00 0.00 38.74 2.69
2783 3079 3.087031 CAGAACCAGATGCCTGTGAAAT 58.913 45.455 0.00 0.00 38.74 2.17
2784 3080 4.019411 TCAGAACCAGATGCCTGTGAAATA 60.019 41.667 0.00 0.00 38.74 1.40
2785 3081 4.701651 CAGAACCAGATGCCTGTGAAATAA 59.298 41.667 0.00 0.00 38.74 1.40
2786 3082 5.183713 CAGAACCAGATGCCTGTGAAATAAA 59.816 40.000 0.00 0.00 38.74 1.40
2787 3083 5.416952 AGAACCAGATGCCTGTGAAATAAAG 59.583 40.000 0.00 0.00 38.74 1.85
2788 3084 4.666512 ACCAGATGCCTGTGAAATAAAGT 58.333 39.130 0.00 0.00 38.74 2.66
2789 3085 5.079643 ACCAGATGCCTGTGAAATAAAGTT 58.920 37.500 0.00 0.00 38.74 2.66
2790 3086 6.245408 ACCAGATGCCTGTGAAATAAAGTTA 58.755 36.000 0.00 0.00 38.74 2.24
2791 3087 6.891908 ACCAGATGCCTGTGAAATAAAGTTAT 59.108 34.615 0.00 0.00 38.74 1.89
2792 3088 7.067494 ACCAGATGCCTGTGAAATAAAGTTATC 59.933 37.037 0.00 0.00 38.74 1.75
2793 3089 7.067372 CCAGATGCCTGTGAAATAAAGTTATCA 59.933 37.037 0.00 0.00 38.74 2.15
2794 3090 8.127327 CAGATGCCTGTGAAATAAAGTTATCAG 58.873 37.037 0.00 0.00 35.70 2.90
2795 3091 8.049117 AGATGCCTGTGAAATAAAGTTATCAGA 58.951 33.333 0.00 0.00 0.00 3.27
2913 3209 5.711506 ACATAAACAGATGCAAGATGTGGAA 59.288 36.000 0.00 0.00 0.00 3.53
3038 3334 6.812998 CCATTCAGGTATTGCATCTTTTCAT 58.187 36.000 0.00 0.00 0.00 2.57
3039 3335 7.270047 CCATTCAGGTATTGCATCTTTTCATT 58.730 34.615 0.00 0.00 0.00 2.57
3071 3367 3.454042 TGATTCATTTTCTCGTGTGCG 57.546 42.857 0.00 0.00 39.92 5.34
3087 3383 1.774727 GCGGAAAAATTGCACGCTG 59.225 52.632 8.19 0.00 46.02 5.18
3116 3413 0.392729 TTGGTCGTTGGACGGTGTTT 60.393 50.000 0.27 0.00 44.39 2.83
3182 3479 1.116308 GGGAGGCTAGGAAGTCTGTC 58.884 60.000 0.00 0.00 37.97 3.51
3206 3503 2.939756 TCGACAGCTAGTTTGTTTGCAA 59.060 40.909 0.00 0.00 0.00 4.08
3232 3529 2.740981 AGCTCGATTCTTTGTGCAAGAG 59.259 45.455 0.00 0.00 42.76 2.85
3235 3532 4.668686 GCTCGATTCTTTGTGCAAGAGAAG 60.669 45.833 11.71 4.28 42.76 2.85
3236 3533 3.187227 TCGATTCTTTGTGCAAGAGAAGC 59.813 43.478 11.18 11.18 42.76 3.86
3239 3536 2.138320 TCTTTGTGCAAGAGAAGCTCG 58.862 47.619 0.00 0.00 36.51 5.03
3240 3537 2.138320 CTTTGTGCAAGAGAAGCTCGA 58.862 47.619 0.00 0.00 35.36 4.04
3242 3539 0.389025 TGTGCAAGAGAAGCTCGACA 59.611 50.000 0.00 0.00 35.36 4.35
3265 3574 2.849294 AAGAGTGAGGAAGCAAGTCC 57.151 50.000 0.00 0.00 38.03 3.85
3296 3605 3.245371 TGGATGGAGAACAATTGCCTTCT 60.245 43.478 10.25 10.25 0.00 2.85
3318 3627 2.069273 CAGTTAACTCCAACGAGCCTG 58.931 52.381 4.77 0.00 40.03 4.85
3386 3695 7.111247 AGATGGAGATTCTACTGAACAGAAG 57.889 40.000 8.87 0.00 35.57 2.85
3425 3734 6.592870 ACCAAGTACTACAAAAGAAGAAGCT 58.407 36.000 0.00 0.00 0.00 3.74
3431 3740 7.870445 AGTACTACAAAAGAAGAAGCTCAAGAG 59.130 37.037 0.00 0.00 0.00 2.85
3445 3754 5.795972 AGCTCAAGAGGAAGTAAGTTAACC 58.204 41.667 0.88 0.00 0.00 2.85
3460 3769 9.908152 AGTAAGTTAACCTATGTTTTCAATTGC 57.092 29.630 0.88 0.00 35.87 3.56
3464 3773 7.384932 AGTTAACCTATGTTTTCAATTGCTTGC 59.615 33.333 0.88 0.00 35.87 4.01
3486 3795 5.056480 GCCATTCTAATATTGCAAAACCCC 58.944 41.667 1.71 0.00 0.00 4.95
3526 3836 3.630148 GACGCGCATCATGTCCGG 61.630 66.667 5.73 0.00 0.00 5.14
3560 3870 1.610038 CAGCAGCTGGTGAATGTCAAA 59.390 47.619 36.58 0.00 45.66 2.69
3574 3884 2.033372 TGTCAAAGAGTACCACCGACA 58.967 47.619 0.00 0.00 0.00 4.35
3585 3895 0.391528 CCACCGACAGATGTGATGCA 60.392 55.000 0.00 0.00 34.37 3.96
3601 3911 2.939782 GCATGATGCAGCTTTGTCG 58.060 52.632 13.36 0.00 44.26 4.35
3626 3936 2.140065 TGTCACTGAGAAGAAGCACG 57.860 50.000 0.00 0.00 0.00 5.34
3676 3986 6.314152 GGGAAGAATGTACTGAAGAAGTAAGC 59.686 42.308 0.00 0.00 43.08 3.09
3710 4020 7.635423 TGTTTATGTTGTTGATCGGCATATAC 58.365 34.615 0.00 0.00 0.00 1.47
3778 4095 7.754924 GGATTGGATGTTAACAGTGTTAATGTG 59.245 37.037 26.73 0.00 0.00 3.21
3785 4102 3.492102 ACAGTGTTAATGTGAGCAGGT 57.508 42.857 0.00 0.00 0.00 4.00
3911 4282 3.941483 ACTAAAGCATGTATGGACAGTGC 59.059 43.478 0.00 0.00 39.50 4.40
4279 4665 0.669318 GTCCGTTGATGCCGACTTGA 60.669 55.000 0.00 0.00 0.00 3.02
4613 5161 2.026822 AGACTGAAGCTGTACCATTGGG 60.027 50.000 7.78 0.00 41.29 4.12
4644 5192 7.297936 TGACAAGACCACTGAAAATACTCTA 57.702 36.000 0.00 0.00 0.00 2.43
4709 7900 5.359009 CCATGGAAAATACTCTGAATGCTGT 59.641 40.000 5.56 0.00 0.00 4.40
4774 7968 4.154918 GCAAGACCACTGAAAATACTCTGG 59.845 45.833 0.00 0.00 0.00 3.86
4915 8115 0.246635 AAGTACAAGCGACGGAGCAT 59.753 50.000 7.12 0.00 40.15 3.79
5405 8650 6.019801 CACGCTTGATGGTTAAGTCTATGTAC 60.020 42.308 0.00 0.00 0.00 2.90
5547 8792 1.885850 GACGACTGTTGGCGTTGGT 60.886 57.895 0.00 0.00 41.34 3.67
5551 8796 1.227853 ACTGTTGGCGTTGGTCCTC 60.228 57.895 0.00 0.00 0.00 3.71
5563 8808 3.288092 GTTGGTCCTCCAGTTTTTCAGT 58.712 45.455 0.00 0.00 45.22 3.41
5566 8811 4.349365 TGGTCCTCCAGTTTTTCAGTTTT 58.651 39.130 0.00 0.00 39.03 2.43
5568 8813 4.401202 GGTCCTCCAGTTTTTCAGTTTTCA 59.599 41.667 0.00 0.00 0.00 2.69
5569 8814 5.105513 GGTCCTCCAGTTTTTCAGTTTTCAA 60.106 40.000 0.00 0.00 0.00 2.69
5606 8861 3.436001 TCGCCTCGAGTTTGGAATC 57.564 52.632 12.31 0.00 0.00 2.52
5614 8869 1.202065 CGAGTTTGGAATCATGCACCG 60.202 52.381 0.00 0.00 0.00 4.94
5615 8870 0.527565 AGTTTGGAATCATGCACCGC 59.472 50.000 0.00 0.00 0.00 5.68
5628 8883 4.619227 ACCGCGGGTTGGTCTGTG 62.619 66.667 31.76 0.00 33.35 3.66
5635 8890 1.770294 GGGTTGGTCTGTGGTTTCAA 58.230 50.000 0.00 0.00 0.00 2.69
5664 8919 7.441890 TTTGAATAACGCAAATACCTTCTGA 57.558 32.000 0.00 0.00 30.87 3.27
5672 8927 5.527582 ACGCAAATACCTTCTGAATATCCAC 59.472 40.000 0.00 0.00 0.00 4.02
5744 8999 6.580788 TGGAAAATGTGAGCAATCTTGAAAA 58.419 32.000 0.00 0.00 0.00 2.29
5758 9013 7.585210 GCAATCTTGAAAAGCAAACATTTTCTC 59.415 33.333 11.23 0.00 45.70 2.87
5865 9120 4.552166 AAAACTGAACCTGAACATGACG 57.448 40.909 0.00 0.00 0.00 4.35
5866 9121 2.910688 ACTGAACCTGAACATGACGT 57.089 45.000 0.00 0.00 0.00 4.34
5867 9122 2.483876 ACTGAACCTGAACATGACGTG 58.516 47.619 0.00 0.00 0.00 4.49
5868 9123 2.102420 ACTGAACCTGAACATGACGTGA 59.898 45.455 0.00 0.00 0.00 4.35
5869 9124 3.130633 CTGAACCTGAACATGACGTGAA 58.869 45.455 0.00 0.00 0.00 3.18
5870 9125 2.869801 TGAACCTGAACATGACGTGAAC 59.130 45.455 0.00 0.00 0.00 3.18
5871 9126 2.613026 ACCTGAACATGACGTGAACA 57.387 45.000 0.00 0.58 0.00 3.18
5872 9127 3.126001 ACCTGAACATGACGTGAACAT 57.874 42.857 0.00 0.00 0.00 2.71
5873 9128 3.476552 ACCTGAACATGACGTGAACATT 58.523 40.909 0.00 0.00 0.00 2.71
5874 9129 3.498397 ACCTGAACATGACGTGAACATTC 59.502 43.478 0.00 0.00 0.00 2.67
5875 9130 3.748048 CCTGAACATGACGTGAACATTCT 59.252 43.478 0.00 0.00 0.00 2.40
5876 9131 4.377738 CCTGAACATGACGTGAACATTCTG 60.378 45.833 0.00 0.00 0.00 3.02
5877 9132 3.498018 TGAACATGACGTGAACATTCTGG 59.502 43.478 0.00 0.00 0.00 3.86
5878 9133 3.401033 ACATGACGTGAACATTCTGGA 57.599 42.857 0.00 0.00 0.00 3.86
5879 9134 3.942829 ACATGACGTGAACATTCTGGAT 58.057 40.909 0.00 0.00 0.00 3.41
5880 9135 3.686241 ACATGACGTGAACATTCTGGATG 59.314 43.478 0.00 0.00 41.71 3.51
5881 9136 2.698803 TGACGTGAACATTCTGGATGG 58.301 47.619 0.00 0.00 40.21 3.51
5882 9137 2.038426 TGACGTGAACATTCTGGATGGT 59.962 45.455 0.00 0.00 38.76 3.55
5883 9138 3.074412 GACGTGAACATTCTGGATGGTT 58.926 45.455 0.00 0.00 35.26 3.67
5884 9139 3.074412 ACGTGAACATTCTGGATGGTTC 58.926 45.455 0.20 3.20 35.26 3.62
5885 9140 2.094258 CGTGAACATTCTGGATGGTTCG 59.906 50.000 0.20 0.00 35.26 3.95
5886 9141 2.083774 TGAACATTCTGGATGGTTCGC 58.916 47.619 0.20 0.00 35.26 4.70
5887 9142 2.083774 GAACATTCTGGATGGTTCGCA 58.916 47.619 0.20 0.00 35.26 5.10
5888 9143 2.198827 ACATTCTGGATGGTTCGCAA 57.801 45.000 0.20 0.00 40.21 4.85
5889 9144 2.513753 ACATTCTGGATGGTTCGCAAA 58.486 42.857 0.20 0.00 40.21 3.68
5890 9145 2.890311 ACATTCTGGATGGTTCGCAAAA 59.110 40.909 0.20 0.00 40.21 2.44
5891 9146 3.244976 CATTCTGGATGGTTCGCAAAAC 58.755 45.455 0.00 0.00 31.83 2.43
5892 9147 1.243902 TCTGGATGGTTCGCAAAACC 58.756 50.000 10.39 10.39 40.67 3.27
5899 9154 2.882324 TGGTTCGCAAAACCAAGAAAC 58.118 42.857 16.24 0.00 46.44 2.78
5900 9155 2.494073 TGGTTCGCAAAACCAAGAAACT 59.506 40.909 16.24 0.00 46.44 2.66
5901 9156 3.695060 TGGTTCGCAAAACCAAGAAACTA 59.305 39.130 16.24 0.00 46.44 2.24
5902 9157 4.201970 TGGTTCGCAAAACCAAGAAACTAG 60.202 41.667 16.24 0.00 46.44 2.57
5903 9158 4.035909 GGTTCGCAAAACCAAGAAACTAGA 59.964 41.667 12.05 0.00 40.03 2.43
5904 9159 5.449451 GGTTCGCAAAACCAAGAAACTAGAA 60.449 40.000 12.05 0.00 40.03 2.10
5905 9160 6.206498 GTTCGCAAAACCAAGAAACTAGAAT 58.794 36.000 0.00 0.00 0.00 2.40
5906 9161 7.357303 GTTCGCAAAACCAAGAAACTAGAATA 58.643 34.615 0.00 0.00 0.00 1.75
5907 9162 6.894828 TCGCAAAACCAAGAAACTAGAATAC 58.105 36.000 0.00 0.00 0.00 1.89
5908 9163 6.483974 TCGCAAAACCAAGAAACTAGAATACA 59.516 34.615 0.00 0.00 0.00 2.29
5909 9164 7.174253 TCGCAAAACCAAGAAACTAGAATACAT 59.826 33.333 0.00 0.00 0.00 2.29
5910 9165 7.271223 CGCAAAACCAAGAAACTAGAATACATG 59.729 37.037 0.00 0.00 0.00 3.21
5911 9166 7.542130 GCAAAACCAAGAAACTAGAATACATGG 59.458 37.037 0.00 0.25 0.00 3.66
5912 9167 8.792633 CAAAACCAAGAAACTAGAATACATGGA 58.207 33.333 0.00 0.00 0.00 3.41
5913 9168 8.934023 AAACCAAGAAACTAGAATACATGGAA 57.066 30.769 0.00 0.00 0.00 3.53
5914 9169 8.934023 AACCAAGAAACTAGAATACATGGAAA 57.066 30.769 0.00 0.00 0.00 3.13
5915 9170 8.336801 ACCAAGAAACTAGAATACATGGAAAC 57.663 34.615 0.00 0.00 0.00 2.78
5916 9171 8.164070 ACCAAGAAACTAGAATACATGGAAACT 58.836 33.333 0.00 0.00 0.00 2.66
5917 9172 9.667107 CCAAGAAACTAGAATACATGGAAACTA 57.333 33.333 0.00 0.00 0.00 2.24
5923 9178 8.894768 ACTAGAATACATGGAAACTAGAATGC 57.105 34.615 21.10 0.00 33.77 3.56
5924 9179 8.486210 ACTAGAATACATGGAAACTAGAATGCA 58.514 33.333 21.10 0.00 33.77 3.96
5925 9180 9.499479 CTAGAATACATGGAAACTAGAATGCAT 57.501 33.333 13.34 0.00 32.00 3.96
5926 9181 8.757982 AGAATACATGGAAACTAGAATGCATT 57.242 30.769 12.83 12.83 0.00 3.56
5927 9182 9.193806 AGAATACATGGAAACTAGAATGCATTT 57.806 29.630 14.33 6.39 0.00 2.32
5932 9187 9.995003 ACATGGAAACTAGAATGCATTTAAAAA 57.005 25.926 14.33 0.00 0.00 1.94
5935 9190 9.995003 TGGAAACTAGAATGCATTTAAAAATGT 57.005 25.926 14.33 3.74 45.77 2.71
5944 9199 9.269415 GAATGCATTTAAAAATGTTGATCAAGC 57.731 29.630 14.33 4.73 45.77 4.01
5945 9200 7.725818 TGCATTTAAAAATGTTGATCAAGCA 57.274 28.000 8.80 10.45 45.77 3.91
5946 9201 8.325421 TGCATTTAAAAATGTTGATCAAGCAT 57.675 26.923 8.80 12.24 45.77 3.79
5947 9202 8.784994 TGCATTTAAAAATGTTGATCAAGCATT 58.215 25.926 20.89 20.89 45.77 3.56
5986 9241 7.972832 AAAAGTACTCGAAACATGGTAATCA 57.027 32.000 0.00 0.00 0.00 2.57
5987 9242 7.972832 AAAGTACTCGAAACATGGTAATCAA 57.027 32.000 0.00 0.00 0.00 2.57
5988 9243 7.596749 AAGTACTCGAAACATGGTAATCAAG 57.403 36.000 0.00 0.00 0.00 3.02
5989 9244 4.946784 ACTCGAAACATGGTAATCAAGC 57.053 40.909 0.00 0.00 0.00 4.01
5990 9245 4.323417 ACTCGAAACATGGTAATCAAGCA 58.677 39.130 0.00 0.00 40.55 3.91
5992 9247 6.112734 ACTCGAAACATGGTAATCAAGCATA 58.887 36.000 0.00 0.00 44.47 3.14
5993 9248 6.597672 ACTCGAAACATGGTAATCAAGCATAA 59.402 34.615 0.00 0.00 44.47 1.90
5994 9249 7.283127 ACTCGAAACATGGTAATCAAGCATAAT 59.717 33.333 0.00 0.00 44.47 1.28
5995 9250 7.416817 TCGAAACATGGTAATCAAGCATAATG 58.583 34.615 0.00 0.00 44.47 1.90
5996 9251 6.142798 CGAAACATGGTAATCAAGCATAATGC 59.857 38.462 0.00 0.00 44.47 3.56
6292 9726 2.748209 AAAACAAGGTAGTGGCCTGT 57.252 45.000 3.32 0.00 39.17 4.00
6293 9727 1.981256 AAACAAGGTAGTGGCCTGTG 58.019 50.000 3.32 0.00 39.17 3.66
6294 9728 0.110486 AACAAGGTAGTGGCCTGTGG 59.890 55.000 3.32 0.00 39.17 4.17
6304 9738 4.828296 GCCTGTGGCCTCCCATGG 62.828 72.222 4.14 4.14 44.51 3.66
6305 9739 4.133373 CCTGTGGCCTCCCATGGG 62.133 72.222 26.30 26.30 44.51 4.00
6327 9761 3.509659 GCCGGGCCATTTACAGAC 58.490 61.111 8.12 0.00 0.00 3.51
6328 9762 2.469516 GCCGGGCCATTTACAGACG 61.470 63.158 8.12 0.00 0.00 4.18
6329 9763 1.078708 CCGGGCCATTTACAGACGT 60.079 57.895 4.39 0.00 0.00 4.34
6330 9764 1.366111 CCGGGCCATTTACAGACGTG 61.366 60.000 4.39 0.00 0.00 4.49
6331 9765 1.366111 CGGGCCATTTACAGACGTGG 61.366 60.000 4.39 0.00 34.84 4.94
6337 9771 3.596214 CCATTTACAGACGTGGCTAACT 58.404 45.455 0.00 0.00 0.00 2.24
6338 9772 3.370978 CCATTTACAGACGTGGCTAACTG 59.629 47.826 0.00 0.00 36.58 3.16
6339 9773 4.242475 CATTTACAGACGTGGCTAACTGA 58.758 43.478 6.68 0.00 34.88 3.41
6340 9774 3.570926 TTACAGACGTGGCTAACTGAG 57.429 47.619 6.68 0.00 34.88 3.35
6341 9775 1.329256 ACAGACGTGGCTAACTGAGT 58.671 50.000 6.68 0.00 34.88 3.41
6342 9776 1.000163 ACAGACGTGGCTAACTGAGTG 60.000 52.381 6.68 0.00 34.88 3.51
6343 9777 1.000163 CAGACGTGGCTAACTGAGTGT 60.000 52.381 0.00 0.00 32.90 3.55
6344 9778 2.228103 CAGACGTGGCTAACTGAGTGTA 59.772 50.000 0.00 0.00 32.90 2.90
6345 9779 2.228343 AGACGTGGCTAACTGAGTGTAC 59.772 50.000 0.00 0.00 0.00 2.90
6346 9780 1.271656 ACGTGGCTAACTGAGTGTACC 59.728 52.381 0.00 0.00 0.00 3.34
6347 9781 1.403780 CGTGGCTAACTGAGTGTACCC 60.404 57.143 0.00 0.00 0.00 3.69
6348 9782 1.900486 GTGGCTAACTGAGTGTACCCT 59.100 52.381 0.00 0.00 0.00 4.34
6349 9783 3.094572 GTGGCTAACTGAGTGTACCCTA 58.905 50.000 0.00 0.00 0.00 3.53
6350 9784 3.094572 TGGCTAACTGAGTGTACCCTAC 58.905 50.000 0.00 0.00 0.00 3.18
6351 9785 2.098770 GGCTAACTGAGTGTACCCTACG 59.901 54.545 0.00 0.00 0.00 3.51
6352 9786 2.751806 GCTAACTGAGTGTACCCTACGT 59.248 50.000 0.00 0.00 0.00 3.57
6353 9787 3.192212 GCTAACTGAGTGTACCCTACGTT 59.808 47.826 0.00 0.00 0.00 3.99
6354 9788 4.321527 GCTAACTGAGTGTACCCTACGTTT 60.322 45.833 0.00 0.00 0.00 3.60
6355 9789 3.930634 ACTGAGTGTACCCTACGTTTC 57.069 47.619 0.00 0.00 0.00 2.78
6356 9790 2.227388 ACTGAGTGTACCCTACGTTTCG 59.773 50.000 0.00 0.00 0.00 3.46
6357 9791 1.068333 TGAGTGTACCCTACGTTTCGC 60.068 52.381 0.00 0.00 0.00 4.70
6358 9792 1.200948 GAGTGTACCCTACGTTTCGCT 59.799 52.381 0.00 0.00 0.00 4.93
6359 9793 2.420022 GAGTGTACCCTACGTTTCGCTA 59.580 50.000 0.00 0.00 0.00 4.26
6360 9794 2.162408 AGTGTACCCTACGTTTCGCTAC 59.838 50.000 0.00 0.00 0.00 3.58
6361 9795 1.472480 TGTACCCTACGTTTCGCTACC 59.528 52.381 0.00 0.00 0.00 3.18
6362 9796 1.472480 GTACCCTACGTTTCGCTACCA 59.528 52.381 0.00 0.00 0.00 3.25
6363 9797 0.529378 ACCCTACGTTTCGCTACCAG 59.471 55.000 0.00 0.00 0.00 4.00
6364 9798 0.804933 CCCTACGTTTCGCTACCAGC 60.805 60.000 0.00 0.00 38.02 4.85
6373 9807 4.485554 GCTACCAGCGAGACACAG 57.514 61.111 0.00 0.00 0.00 3.66
6374 9808 1.587054 GCTACCAGCGAGACACAGT 59.413 57.895 0.00 0.00 0.00 3.55
6375 9809 0.038159 GCTACCAGCGAGACACAGTT 60.038 55.000 0.00 0.00 0.00 3.16
6376 9810 1.702886 CTACCAGCGAGACACAGTTG 58.297 55.000 0.00 0.00 0.00 3.16
6377 9811 0.319555 TACCAGCGAGACACAGTTGC 60.320 55.000 0.00 0.00 0.00 4.17
6378 9812 2.661566 CCAGCGAGACACAGTTGCG 61.662 63.158 0.00 0.00 0.00 4.85
6380 9814 4.077188 GCGAGACACAGTTGCGCC 62.077 66.667 4.18 0.00 41.65 6.53
6381 9815 2.356313 CGAGACACAGTTGCGCCT 60.356 61.111 4.18 0.00 0.00 5.52
6382 9816 1.956170 CGAGACACAGTTGCGCCTT 60.956 57.895 4.18 0.00 0.00 4.35
6383 9817 0.666274 CGAGACACAGTTGCGCCTTA 60.666 55.000 4.18 0.00 0.00 2.69
6384 9818 0.790814 GAGACACAGTTGCGCCTTAC 59.209 55.000 4.18 0.00 0.00 2.34
6385 9819 0.105964 AGACACAGTTGCGCCTTACA 59.894 50.000 4.18 0.00 0.00 2.41
6386 9820 0.234884 GACACAGTTGCGCCTTACAC 59.765 55.000 4.18 0.00 0.00 2.90
6387 9821 1.164041 ACACAGTTGCGCCTTACACC 61.164 55.000 4.18 0.00 0.00 4.16
6388 9822 0.884704 CACAGTTGCGCCTTACACCT 60.885 55.000 4.18 0.00 0.00 4.00
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 9.123709 CAAATCTTAGCAAGTTTTTATACGCAA 57.876 29.630 0.00 0.00 30.20 4.85
2 3 8.293867 ACAAATCTTAGCAAGTTTTTATACGCA 58.706 29.630 0.00 0.00 30.20 5.24
9 10 8.088365 GGTCCATACAAATCTTAGCAAGTTTTT 58.912 33.333 0.00 0.00 30.20 1.94
14 15 6.757897 TTGGTCCATACAAATCTTAGCAAG 57.242 37.500 0.00 0.00 0.00 4.01
15 16 6.663093 ACATTGGTCCATACAAATCTTAGCAA 59.337 34.615 0.00 0.00 25.67 3.91
16 17 6.186957 ACATTGGTCCATACAAATCTTAGCA 58.813 36.000 0.00 0.00 25.67 3.49
17 18 6.699575 ACATTGGTCCATACAAATCTTAGC 57.300 37.500 0.00 0.00 25.67 3.09
20 21 9.253832 TGATTTACATTGGTCCATACAAATCTT 57.746 29.630 19.26 0.00 34.06 2.40
21 22 8.686334 GTGATTTACATTGGTCCATACAAATCT 58.314 33.333 19.26 0.00 34.06 2.40
22 23 8.465999 TGTGATTTACATTGGTCCATACAAATC 58.534 33.333 15.31 15.31 33.42 2.17
23 24 8.359875 TGTGATTTACATTGGTCCATACAAAT 57.640 30.769 0.00 0.00 33.42 2.32
24 25 7.767250 TGTGATTTACATTGGTCCATACAAA 57.233 32.000 0.00 0.00 33.42 2.83
62 63 8.970020 TGGATAGACAGACAATTGCAATATTTT 58.030 29.630 13.39 0.00 0.00 1.82
63 64 8.523915 TGGATAGACAGACAATTGCAATATTT 57.476 30.769 13.39 0.00 0.00 1.40
64 65 7.776969 ACTGGATAGACAGACAATTGCAATATT 59.223 33.333 13.39 1.99 40.97 1.28
65 66 7.285566 ACTGGATAGACAGACAATTGCAATAT 58.714 34.615 13.39 3.88 40.97 1.28
66 67 6.653020 ACTGGATAGACAGACAATTGCAATA 58.347 36.000 13.39 0.00 40.97 1.90
67 68 5.503927 ACTGGATAGACAGACAATTGCAAT 58.496 37.500 5.99 5.99 40.97 3.56
68 69 4.910195 ACTGGATAGACAGACAATTGCAA 58.090 39.130 5.05 0.00 40.97 4.08
69 70 4.558226 ACTGGATAGACAGACAATTGCA 57.442 40.909 5.05 0.00 40.97 4.08
70 71 6.818644 TCTTAACTGGATAGACAGACAATTGC 59.181 38.462 5.05 0.00 40.97 3.56
71 72 8.954950 ATCTTAACTGGATAGACAGACAATTG 57.045 34.615 3.24 3.24 40.97 2.32
72 73 8.762645 TGATCTTAACTGGATAGACAGACAATT 58.237 33.333 0.00 0.00 40.97 2.32
73 74 8.311395 TGATCTTAACTGGATAGACAGACAAT 57.689 34.615 0.00 0.00 40.97 2.71
74 75 7.718334 TGATCTTAACTGGATAGACAGACAA 57.282 36.000 0.00 0.00 40.97 3.18
75 76 7.904558 ATGATCTTAACTGGATAGACAGACA 57.095 36.000 0.00 0.00 40.97 3.41
85 86 9.929180 CCGAATCTTATTATGATCTTAACTGGA 57.071 33.333 3.35 3.35 0.00 3.86
86 87 9.712305 ACCGAATCTTATTATGATCTTAACTGG 57.288 33.333 3.35 1.29 0.00 4.00
88 89 9.712305 CCACCGAATCTTATTATGATCTTAACT 57.288 33.333 3.35 0.00 0.00 2.24
89 90 8.443937 GCCACCGAATCTTATTATGATCTTAAC 58.556 37.037 3.35 0.00 0.00 2.01
90 91 8.375506 AGCCACCGAATCTTATTATGATCTTAA 58.624 33.333 3.74 3.74 0.00 1.85
91 92 7.819415 CAGCCACCGAATCTTATTATGATCTTA 59.181 37.037 0.00 0.00 0.00 2.10
92 93 6.652481 CAGCCACCGAATCTTATTATGATCTT 59.348 38.462 0.00 0.00 0.00 2.40
93 94 6.169094 CAGCCACCGAATCTTATTATGATCT 58.831 40.000 0.00 0.00 0.00 2.75
94 95 5.352569 CCAGCCACCGAATCTTATTATGATC 59.647 44.000 0.00 0.00 0.00 2.92
95 96 5.248640 CCAGCCACCGAATCTTATTATGAT 58.751 41.667 0.00 0.00 0.00 2.45
96 97 4.504864 CCCAGCCACCGAATCTTATTATGA 60.505 45.833 0.00 0.00 0.00 2.15
97 98 3.753272 CCCAGCCACCGAATCTTATTATG 59.247 47.826 0.00 0.00 0.00 1.90
98 99 3.810743 GCCCAGCCACCGAATCTTATTAT 60.811 47.826 0.00 0.00 0.00 1.28
99 100 2.486548 GCCCAGCCACCGAATCTTATTA 60.487 50.000 0.00 0.00 0.00 0.98
100 101 1.750682 GCCCAGCCACCGAATCTTATT 60.751 52.381 0.00 0.00 0.00 1.40
101 102 0.179018 GCCCAGCCACCGAATCTTAT 60.179 55.000 0.00 0.00 0.00 1.73
102 103 1.223487 GCCCAGCCACCGAATCTTA 59.777 57.895 0.00 0.00 0.00 2.10
103 104 2.044946 GCCCAGCCACCGAATCTT 60.045 61.111 0.00 0.00 0.00 2.40
143 144 2.862347 CTTGTCTACGCGTCCCCGAC 62.862 65.000 18.63 18.30 35.63 4.79
144 145 2.672651 TTGTCTACGCGTCCCCGA 60.673 61.111 18.63 5.61 35.63 5.14
145 146 2.202570 CTTGTCTACGCGTCCCCG 60.203 66.667 18.63 2.83 37.07 5.73
146 147 0.037975 TTTCTTGTCTACGCGTCCCC 60.038 55.000 18.63 4.82 0.00 4.81
147 148 1.725164 CTTTTCTTGTCTACGCGTCCC 59.275 52.381 18.63 5.25 0.00 4.46
148 149 2.669364 TCTTTTCTTGTCTACGCGTCC 58.331 47.619 18.63 5.68 0.00 4.79
149 150 4.443394 TCTTTCTTTTCTTGTCTACGCGTC 59.557 41.667 18.63 1.04 0.00 5.19
150 151 4.365723 TCTTTCTTTTCTTGTCTACGCGT 58.634 39.130 19.17 19.17 0.00 6.01
151 152 4.966850 TCTTTCTTTTCTTGTCTACGCG 57.033 40.909 3.53 3.53 0.00 6.01
152 153 6.846786 GTCTTTCTTTCTTTTCTTGTCTACGC 59.153 38.462 0.00 0.00 0.00 4.42
153 154 7.906160 TGTCTTTCTTTCTTTTCTTGTCTACG 58.094 34.615 0.00 0.00 0.00 3.51
154 155 9.491934 GTTGTCTTTCTTTCTTTTCTTGTCTAC 57.508 33.333 0.00 0.00 0.00 2.59
155 156 8.674607 GGTTGTCTTTCTTTCTTTTCTTGTCTA 58.325 33.333 0.00 0.00 0.00 2.59
156 157 7.539436 GGTTGTCTTTCTTTCTTTTCTTGTCT 58.461 34.615 0.00 0.00 0.00 3.41
157 158 6.469275 CGGTTGTCTTTCTTTCTTTTCTTGTC 59.531 38.462 0.00 0.00 0.00 3.18
158 159 6.322491 CGGTTGTCTTTCTTTCTTTTCTTGT 58.678 36.000 0.00 0.00 0.00 3.16
159 160 5.230097 GCGGTTGTCTTTCTTTCTTTTCTTG 59.770 40.000 0.00 0.00 0.00 3.02
160 161 5.105917 TGCGGTTGTCTTTCTTTCTTTTCTT 60.106 36.000 0.00 0.00 0.00 2.52
161 162 4.398044 TGCGGTTGTCTTTCTTTCTTTTCT 59.602 37.500 0.00 0.00 0.00 2.52
162 163 4.668289 TGCGGTTGTCTTTCTTTCTTTTC 58.332 39.130 0.00 0.00 0.00 2.29
163 164 4.398044 TCTGCGGTTGTCTTTCTTTCTTTT 59.602 37.500 0.00 0.00 0.00 2.27
164 165 3.945285 TCTGCGGTTGTCTTTCTTTCTTT 59.055 39.130 0.00 0.00 0.00 2.52
165 166 3.541632 TCTGCGGTTGTCTTTCTTTCTT 58.458 40.909 0.00 0.00 0.00 2.52
166 167 3.194005 TCTGCGGTTGTCTTTCTTTCT 57.806 42.857 0.00 0.00 0.00 2.52
167 168 3.963383 TTCTGCGGTTGTCTTTCTTTC 57.037 42.857 0.00 0.00 0.00 2.62
168 169 4.712122 TTTTCTGCGGTTGTCTTTCTTT 57.288 36.364 0.00 0.00 0.00 2.52
169 170 4.712122 TTTTTCTGCGGTTGTCTTTCTT 57.288 36.364 0.00 0.00 0.00 2.52
190 191 3.643320 CCAGCCTCTTTCTTTCCCTTTTT 59.357 43.478 0.00 0.00 0.00 1.94
191 192 3.234353 CCAGCCTCTTTCTTTCCCTTTT 58.766 45.455 0.00 0.00 0.00 2.27
192 193 2.177888 ACCAGCCTCTTTCTTTCCCTTT 59.822 45.455 0.00 0.00 0.00 3.11
193 194 1.783365 ACCAGCCTCTTTCTTTCCCTT 59.217 47.619 0.00 0.00 0.00 3.95
194 195 1.074566 CACCAGCCTCTTTCTTTCCCT 59.925 52.381 0.00 0.00 0.00 4.20
195 196 1.539157 CACCAGCCTCTTTCTTTCCC 58.461 55.000 0.00 0.00 0.00 3.97
196 197 1.073923 TCCACCAGCCTCTTTCTTTCC 59.926 52.381 0.00 0.00 0.00 3.13
218 219 0.605319 TTCGCATTTCTTCTGGGCGT 60.605 50.000 0.00 0.00 46.98 5.68
221 222 2.098117 GGTCATTCGCATTTCTTCTGGG 59.902 50.000 0.00 0.00 0.00 4.45
229 230 1.463674 GACAGGGGTCATTCGCATTT 58.536 50.000 0.00 0.00 43.73 2.32
243 244 0.818296 AGATTTCTCGACCCGACAGG 59.182 55.000 0.00 0.00 43.78 4.00
244 245 1.202313 GGAGATTTCTCGACCCGACAG 60.202 57.143 1.67 0.00 43.76 3.51
245 246 0.815734 GGAGATTTCTCGACCCGACA 59.184 55.000 1.67 0.00 43.76 4.35
246 247 0.102663 GGGAGATTTCTCGACCCGAC 59.897 60.000 1.67 0.00 43.76 4.79
247 248 2.501492 GGGAGATTTCTCGACCCGA 58.499 57.895 1.67 0.00 43.76 5.14
265 266 4.489771 AAGCCGGGGGAGCATTCG 62.490 66.667 2.18 0.00 0.00 3.34
294 296 1.228033 GGCGGGTATTTATGCGGGT 60.228 57.895 0.00 0.00 0.00 5.28
296 298 2.322081 CGGGCGGGTATTTATGCGG 61.322 63.158 0.00 0.00 0.00 5.69
320 322 1.069022 TGTAGTCTGTTGCGTCGGTAC 60.069 52.381 0.00 0.00 0.00 3.34
322 324 0.039437 CTGTAGTCTGTTGCGTCGGT 60.039 55.000 0.00 0.00 0.00 4.69
323 325 0.240145 TCTGTAGTCTGTTGCGTCGG 59.760 55.000 0.00 0.00 0.00 4.79
325 327 2.417339 TGTCTGTAGTCTGTTGCGTC 57.583 50.000 0.00 0.00 0.00 5.19
326 328 2.159156 TGTTGTCTGTAGTCTGTTGCGT 60.159 45.455 0.00 0.00 0.00 5.24
327 329 2.469826 TGTTGTCTGTAGTCTGTTGCG 58.530 47.619 0.00 0.00 0.00 4.85
328 330 3.717707 TCTGTTGTCTGTAGTCTGTTGC 58.282 45.455 0.00 0.00 0.00 4.17
331 333 3.833732 TCCTCTGTTGTCTGTAGTCTGT 58.166 45.455 0.00 0.00 0.00 3.41
332 334 4.520874 TCTTCCTCTGTTGTCTGTAGTCTG 59.479 45.833 0.00 0.00 0.00 3.51
333 335 4.730966 TCTTCCTCTGTTGTCTGTAGTCT 58.269 43.478 0.00 0.00 0.00 3.24
334 336 5.241949 TCTTCTTCCTCTGTTGTCTGTAGTC 59.758 44.000 0.00 0.00 0.00 2.59
337 339 5.833667 TCTTCTTCTTCCTCTGTTGTCTGTA 59.166 40.000 0.00 0.00 0.00 2.74
338 340 4.651503 TCTTCTTCTTCCTCTGTTGTCTGT 59.348 41.667 0.00 0.00 0.00 3.41
339 341 5.207110 TCTTCTTCTTCCTCTGTTGTCTG 57.793 43.478 0.00 0.00 0.00 3.51
340 342 5.221621 CCTTCTTCTTCTTCCTCTGTTGTCT 60.222 44.000 0.00 0.00 0.00 3.41
341 343 4.994217 CCTTCTTCTTCTTCCTCTGTTGTC 59.006 45.833 0.00 0.00 0.00 3.18
342 344 4.656112 TCCTTCTTCTTCTTCCTCTGTTGT 59.344 41.667 0.00 0.00 0.00 3.32
343 345 5.220710 TCCTTCTTCTTCTTCCTCTGTTG 57.779 43.478 0.00 0.00 0.00 3.33
359 361 2.031120 CGCTCTGATTCTCCTCCTTCT 58.969 52.381 0.00 0.00 0.00 2.85
364 366 0.317770 CGAGCGCTCTGATTCTCCTC 60.318 60.000 32.88 5.31 0.00 3.71
367 369 2.292206 CGCGAGCGCTCTGATTCTC 61.292 63.158 32.88 13.06 39.32 2.87
411 440 2.769652 ATCAATGGTGTGTGCGGGCT 62.770 55.000 0.00 0.00 0.00 5.19
420 449 1.544724 CCGGGACAAATCAATGGTGT 58.455 50.000 0.00 0.00 0.00 4.16
425 454 1.752694 CGGCCCGGGACAAATCAAT 60.753 57.895 30.17 0.00 0.00 2.57
427 456 4.418328 CCGGCCCGGGACAAATCA 62.418 66.667 30.17 0.00 44.15 2.57
445 474 0.252057 TCTGATCCGAGGAACCACCA 60.252 55.000 0.00 0.00 42.04 4.17
465 494 1.539157 TCCGATCCGATCTGATCTGG 58.461 55.000 20.65 20.88 39.20 3.86
487 516 1.324383 GGGGTGTTTACAGTTGTGGG 58.676 55.000 0.00 0.00 0.00 4.61
488 517 1.324383 GGGGGTGTTTACAGTTGTGG 58.676 55.000 0.00 0.00 0.00 4.17
505 534 0.251634 GAGGTGAAGAGAAGCAGGGG 59.748 60.000 0.00 0.00 0.00 4.79
506 535 0.251634 GGAGGTGAAGAGAAGCAGGG 59.748 60.000 0.00 0.00 0.00 4.45
508 537 1.206849 GGAGGAGGTGAAGAGAAGCAG 59.793 57.143 0.00 0.00 0.00 4.24
509 538 1.270907 GGAGGAGGTGAAGAGAAGCA 58.729 55.000 0.00 0.00 0.00 3.91
510 539 0.539518 GGGAGGAGGTGAAGAGAAGC 59.460 60.000 0.00 0.00 0.00 3.86
511 540 1.199615 GGGGAGGAGGTGAAGAGAAG 58.800 60.000 0.00 0.00 0.00 2.85
512 541 0.491823 TGGGGAGGAGGTGAAGAGAA 59.508 55.000 0.00 0.00 0.00 2.87
535 564 8.876790 CGCAGCATTTCATTCAGAGATTATATA 58.123 33.333 0.00 0.00 0.00 0.86
536 565 7.389884 ACGCAGCATTTCATTCAGAGATTATAT 59.610 33.333 0.00 0.00 0.00 0.86
537 566 6.707608 ACGCAGCATTTCATTCAGAGATTATA 59.292 34.615 0.00 0.00 0.00 0.98
538 567 5.530171 ACGCAGCATTTCATTCAGAGATTAT 59.470 36.000 0.00 0.00 0.00 1.28
539 568 4.877823 ACGCAGCATTTCATTCAGAGATTA 59.122 37.500 0.00 0.00 0.00 1.75
540 569 3.693085 ACGCAGCATTTCATTCAGAGATT 59.307 39.130 0.00 0.00 0.00 2.40
541 570 3.276857 ACGCAGCATTTCATTCAGAGAT 58.723 40.909 0.00 0.00 0.00 2.75
542 571 2.674852 GACGCAGCATTTCATTCAGAGA 59.325 45.455 0.00 0.00 0.00 3.10
543 572 2.417586 TGACGCAGCATTTCATTCAGAG 59.582 45.455 0.00 0.00 0.00 3.35
558 761 3.143338 TGGTAACAGCCTGACGCA 58.857 55.556 0.00 0.00 46.17 5.24
589 810 9.514908 GAAGGATTCACAAGGCTAGCTAGCTAA 62.515 44.444 37.42 23.53 46.62 3.09
618 843 0.464554 GGTAGGTGAGAGGCAATGGC 60.465 60.000 0.00 0.00 40.13 4.40
658 883 5.437060 GACAGGGCCTTTGATTTATCAGTA 58.563 41.667 1.32 0.00 38.19 2.74
662 887 2.959030 GGGACAGGGCCTTTGATTTATC 59.041 50.000 1.32 1.92 0.00 1.75
672 897 1.214305 TTGCAATAGGGACAGGGCCT 61.214 55.000 0.00 0.00 0.00 5.19
674 899 0.817654 GTTTGCAATAGGGACAGGGC 59.182 55.000 0.00 0.00 0.00 5.19
675 900 2.025887 AGAGTTTGCAATAGGGACAGGG 60.026 50.000 0.00 0.00 0.00 4.45
676 901 3.356529 AGAGTTTGCAATAGGGACAGG 57.643 47.619 0.00 0.00 0.00 4.00
677 902 4.691860 CAAGAGTTTGCAATAGGGACAG 57.308 45.455 0.00 0.00 0.00 3.51
704 929 7.196375 GTTCCCCAAACAAACAAGAATTGCG 62.196 44.000 0.00 0.00 43.21 4.85
705 930 4.035091 GTTCCCCAAACAAACAAGAATTGC 59.965 41.667 0.00 0.00 43.21 3.56
732 969 0.744414 CAACGGGGGACAGTGCATAG 60.744 60.000 0.00 0.00 39.29 2.23
747 987 6.205784 AGGATTTGACACATTGTAAACAACG 58.794 36.000 0.00 0.00 38.86 4.10
759 999 6.462552 TGAAACATGAAAGGATTTGACACA 57.537 33.333 0.00 0.00 39.27 3.72
774 1014 4.706476 ACATGGTAGGTTGGATGAAACATG 59.294 41.667 0.00 0.00 39.12 3.21
775 1015 4.934356 ACATGGTAGGTTGGATGAAACAT 58.066 39.130 0.00 0.00 0.00 2.71
776 1016 4.202514 TGACATGGTAGGTTGGATGAAACA 60.203 41.667 0.00 0.00 0.00 2.83
777 1017 4.156008 GTGACATGGTAGGTTGGATGAAAC 59.844 45.833 0.00 0.00 0.00 2.78
778 1018 4.042809 AGTGACATGGTAGGTTGGATGAAA 59.957 41.667 0.00 0.00 0.00 2.69
779 1019 3.587061 AGTGACATGGTAGGTTGGATGAA 59.413 43.478 0.00 0.00 0.00 2.57
780 1020 3.181329 AGTGACATGGTAGGTTGGATGA 58.819 45.455 0.00 0.00 0.00 2.92
802 1042 2.738521 CAGAACACCCGTCCGCTG 60.739 66.667 0.00 0.00 0.00 5.18
808 1052 1.029681 GGAAAAAGCAGAACACCCGT 58.970 50.000 0.00 0.00 0.00 5.28
878 1155 8.200792 AGAAATACAGATAAGTGTCATGGTCTC 58.799 37.037 0.00 0.00 31.46 3.36
916 1193 0.594602 TTGTGATGTCTGCAAGCTGC 59.405 50.000 0.00 0.00 45.29 5.25
917 1194 2.148768 TCTTGTGATGTCTGCAAGCTG 58.851 47.619 0.00 0.00 39.36 4.24
918 1195 2.424557 CTCTTGTGATGTCTGCAAGCT 58.575 47.619 10.69 0.00 39.36 3.74
919 1196 1.135746 GCTCTTGTGATGTCTGCAAGC 60.136 52.381 10.69 0.00 39.36 4.01
920 1197 2.148768 TGCTCTTGTGATGTCTGCAAG 58.851 47.619 9.80 9.80 40.47 4.01
927 1204 5.108187 ACCAGATTATGCTCTTGTGATGT 57.892 39.130 0.00 0.00 0.00 3.06
928 1205 5.587443 TCAACCAGATTATGCTCTTGTGATG 59.413 40.000 0.00 0.00 0.00 3.07
948 1227 1.620822 AAATGGCTGGGTCTGTCAAC 58.379 50.000 0.00 0.00 0.00 3.18
950 1229 2.092429 GGATAAATGGCTGGGTCTGTCA 60.092 50.000 0.00 0.00 0.00 3.58
951 1230 2.173569 AGGATAAATGGCTGGGTCTGTC 59.826 50.000 0.00 0.00 0.00 3.51
956 1235 0.106015 GGCAGGATAAATGGCTGGGT 60.106 55.000 0.00 0.00 39.94 4.51
957 1236 0.106066 TGGCAGGATAAATGGCTGGG 60.106 55.000 1.16 0.00 43.25 4.45
968 1247 7.846823 ACTAGCCTTTATATATACTGGCAGGAT 59.153 37.037 25.16 17.93 42.46 3.24
1057 1338 2.045885 GGGGGTGATATGGATAGGGAGA 59.954 54.545 0.00 0.00 0.00 3.71
1107 1388 2.401766 GCAGTCCGGTTCAGGCATG 61.402 63.158 0.00 0.00 0.00 4.06
1175 1459 2.295885 GAAGGCCTGAGTGATTCATGG 58.704 52.381 5.69 0.00 34.68 3.66
1279 1563 2.040178 GTATAGAGGAGGTGGTGGTGG 58.960 57.143 0.00 0.00 0.00 4.61
1280 1564 3.033659 AGTATAGAGGAGGTGGTGGTG 57.966 52.381 0.00 0.00 0.00 4.17
1281 1565 3.117208 GGTAGTATAGAGGAGGTGGTGGT 60.117 52.174 0.00 0.00 0.00 4.16
1373 1660 2.673368 GGTGTTTGATCGACAGGATGAC 59.327 50.000 2.30 0.00 39.69 3.06
1624 1917 5.352846 GTGGAAACTCTAAGCTTCTTCCATC 59.647 44.000 20.57 14.25 43.02 3.51
1638 1931 2.022718 AGAGCTGAGGTGGAAACTCT 57.977 50.000 0.00 0.00 35.98 3.24
1654 1947 2.810852 GAGGAAACCACTTGCTGAAGAG 59.189 50.000 0.00 0.00 35.52 2.85
1701 1994 1.364626 GACTGTCATCGGCTGGCTTG 61.365 60.000 2.24 0.00 0.00 4.01
1848 2141 3.706594 TGATCTTGATCTTAGGCGAAGGT 59.293 43.478 7.53 0.00 35.67 3.50
1857 2150 7.199167 TGACAAGGGAATGATCTTGATCTTA 57.801 36.000 11.31 0.00 41.94 2.10
1869 2162 3.164268 TCCAAACCATGACAAGGGAATG 58.836 45.455 1.13 0.00 0.00 2.67
1916 2209 0.104777 TCCAGAGCCATCCCTAGCAT 60.105 55.000 0.00 0.00 0.00 3.79
1951 2244 1.817099 GCTGGTTCTCCGCTGATGG 60.817 63.158 0.00 0.00 36.30 3.51
2013 2306 3.338249 CACAACTGGGATGGTCTTACAG 58.662 50.000 0.00 0.00 35.40 2.74
2051 2344 5.716228 ACTGAAATAGCATGTTCATTCCCAA 59.284 36.000 0.00 0.00 33.45 4.12
2063 2359 1.745087 CCGGCACAACTGAAATAGCAT 59.255 47.619 0.00 0.00 0.00 3.79
2094 2390 2.237392 AGTAGCAGGTTCATTCCCACTC 59.763 50.000 0.00 0.00 0.00 3.51
2121 2417 2.664851 TGCTTCTCCGGCACAACG 60.665 61.111 0.00 0.00 34.56 4.10
2159 2455 1.527370 GGGATGGTCCTGCAGGTAC 59.473 63.158 31.58 25.30 36.57 3.34
2320 2616 0.532862 CGCAAGCATACTGGGGGTAG 60.533 60.000 0.00 0.00 33.51 3.18
2328 2624 1.202580 GGATCCACTCGCAAGCATACT 60.203 52.381 6.95 0.00 37.18 2.12
2423 2719 2.378547 TGGGCCTCTTTAACATCCTTGT 59.621 45.455 4.53 0.00 37.82 3.16
2424 2720 3.085952 TGGGCCTCTTTAACATCCTTG 57.914 47.619 4.53 0.00 0.00 3.61
2766 3062 4.666512 ACTTTATTTCACAGGCATCTGGT 58.333 39.130 0.00 0.00 44.99 4.00
2767 3063 5.649782 AACTTTATTTCACAGGCATCTGG 57.350 39.130 0.00 0.00 44.99 3.86
2768 3064 7.988737 TGATAACTTTATTTCACAGGCATCTG 58.011 34.615 0.00 0.00 46.10 2.90
2769 3065 8.049117 TCTGATAACTTTATTTCACAGGCATCT 58.951 33.333 0.00 0.00 0.00 2.90
2770 3066 8.213518 TCTGATAACTTTATTTCACAGGCATC 57.786 34.615 0.00 0.00 0.00 3.91
2771 3067 8.462016 GTTCTGATAACTTTATTTCACAGGCAT 58.538 33.333 0.00 0.00 0.00 4.40
2772 3068 7.094377 GGTTCTGATAACTTTATTTCACAGGCA 60.094 37.037 0.00 0.00 0.00 4.75
2773 3069 7.094377 TGGTTCTGATAACTTTATTTCACAGGC 60.094 37.037 0.00 0.00 0.00 4.85
2774 3070 8.335532 TGGTTCTGATAACTTTATTTCACAGG 57.664 34.615 0.00 0.00 0.00 4.00
2775 3071 9.219603 TCTGGTTCTGATAACTTTATTTCACAG 57.780 33.333 0.00 0.00 0.00 3.66
2776 3072 9.739276 ATCTGGTTCTGATAACTTTATTTCACA 57.261 29.630 0.00 0.00 0.00 3.58
2777 3073 9.994432 CATCTGGTTCTGATAACTTTATTTCAC 57.006 33.333 0.00 0.00 0.00 3.18
2778 3074 8.677300 GCATCTGGTTCTGATAACTTTATTTCA 58.323 33.333 0.00 0.00 0.00 2.69
2779 3075 8.131731 GGCATCTGGTTCTGATAACTTTATTTC 58.868 37.037 0.00 0.00 0.00 2.17
2780 3076 7.201732 CGGCATCTGGTTCTGATAACTTTATTT 60.202 37.037 0.00 0.00 0.00 1.40
2781 3077 6.260936 CGGCATCTGGTTCTGATAACTTTATT 59.739 38.462 0.00 0.00 0.00 1.40
2782 3078 5.760253 CGGCATCTGGTTCTGATAACTTTAT 59.240 40.000 0.00 0.00 0.00 1.40
2783 3079 5.116180 CGGCATCTGGTTCTGATAACTTTA 58.884 41.667 0.00 0.00 0.00 1.85
2784 3080 3.941483 CGGCATCTGGTTCTGATAACTTT 59.059 43.478 0.00 0.00 0.00 2.66
2785 3081 3.535561 CGGCATCTGGTTCTGATAACTT 58.464 45.455 0.00 0.00 0.00 2.66
2786 3082 2.743183 GCGGCATCTGGTTCTGATAACT 60.743 50.000 0.00 0.00 0.00 2.24
2787 3083 1.599542 GCGGCATCTGGTTCTGATAAC 59.400 52.381 0.00 0.00 0.00 1.89
2788 3084 1.486310 AGCGGCATCTGGTTCTGATAA 59.514 47.619 1.45 0.00 0.00 1.75
2789 3085 1.123077 AGCGGCATCTGGTTCTGATA 58.877 50.000 1.45 0.00 0.00 2.15
2790 3086 0.463295 CAGCGGCATCTGGTTCTGAT 60.463 55.000 1.45 0.00 0.00 2.90
2791 3087 1.078918 CAGCGGCATCTGGTTCTGA 60.079 57.895 1.45 0.00 0.00 3.27
2792 3088 0.957395 AACAGCGGCATCTGGTTCTG 60.957 55.000 1.45 0.00 38.36 3.02
2793 3089 0.674895 GAACAGCGGCATCTGGTTCT 60.675 55.000 1.45 0.00 38.36 3.01
2794 3090 1.796796 GAACAGCGGCATCTGGTTC 59.203 57.895 1.45 4.44 38.36 3.62
2795 3091 2.034879 CGAACAGCGGCATCTGGTT 61.035 57.895 1.45 0.00 38.36 3.67
2913 3209 1.835712 AAGGGCTTGCAGCTGCTTT 60.836 52.632 36.61 18.64 41.99 3.51
2993 3289 4.879545 TGGTGTCAAGGTTCAGAAGTAAAC 59.120 41.667 0.00 0.00 0.00 2.01
3043 3339 8.918658 CACACGAGAAAATGAATCAAATCAAAT 58.081 29.630 0.00 0.00 32.06 2.32
3071 3367 0.319813 AGCCAGCGTGCAATTTTTCC 60.320 50.000 0.00 0.00 0.00 3.13
3087 3383 1.405121 CCAACGACCAAGTACCTAGCC 60.405 57.143 0.00 0.00 0.00 3.93
3116 3413 7.443879 TGCACAAGTATATGAAGAGTCAAAACA 59.556 33.333 0.00 0.00 37.30 2.83
3157 3454 1.118838 CTTCCTAGCCTCCCTCACAG 58.881 60.000 0.00 0.00 0.00 3.66
3206 3503 2.999355 GCACAAAGAATCGAGCTTCTCT 59.001 45.455 1.88 0.00 34.40 3.10
3235 3532 1.202245 CCTCACTCTTAGCTGTCGAGC 60.202 57.143 0.00 0.00 46.64 5.03
3236 3533 2.360844 TCCTCACTCTTAGCTGTCGAG 58.639 52.381 0.00 1.59 0.00 4.04
3239 3536 2.232452 TGCTTCCTCACTCTTAGCTGTC 59.768 50.000 0.00 0.00 33.15 3.51
3240 3537 2.251818 TGCTTCCTCACTCTTAGCTGT 58.748 47.619 0.00 0.00 33.15 4.40
3242 3539 2.903135 ACTTGCTTCCTCACTCTTAGCT 59.097 45.455 0.00 0.00 33.15 3.32
3296 3605 2.367567 AGGCTCGTTGGAGTTAACTGAA 59.632 45.455 14.14 2.62 42.53 3.02
3386 3695 4.525912 ACTTGGTTCTTCCATTTGATGC 57.474 40.909 0.00 0.00 46.60 3.91
3411 3720 5.041191 TCCTCTTGAGCTTCTTCTTTTGT 57.959 39.130 0.00 0.00 0.00 2.83
3425 3734 8.431910 ACATAGGTTAACTTACTTCCTCTTGA 57.568 34.615 5.42 0.00 0.00 3.02
3445 3754 6.592607 AGAATGGCAAGCAATTGAAAACATAG 59.407 34.615 10.34 0.00 0.00 2.23
3460 3769 6.258507 GGGTTTTGCAATATTAGAATGGCAAG 59.741 38.462 0.00 0.00 41.57 4.01
3464 3773 6.127083 ACAGGGGTTTTGCAATATTAGAATGG 60.127 38.462 0.00 0.00 0.00 3.16
3486 3795 7.411912 CGTCAGATATACCACTTCAAAACACAG 60.412 40.741 0.00 0.00 0.00 3.66
3526 3836 1.002134 TGCTGCAGCTTTCCCCTAC 60.002 57.895 36.61 6.97 42.66 3.18
3560 3870 1.819288 CACATCTGTCGGTGGTACTCT 59.181 52.381 0.00 0.00 0.00 3.24
3585 3895 0.035152 TCCCGACAAAGCTGCATCAT 60.035 50.000 1.02 0.00 0.00 2.45
3598 3908 0.959553 TCTCAGTGACAAGTCCCGAC 59.040 55.000 0.00 0.00 0.00 4.79
3601 3911 3.658709 CTTCTTCTCAGTGACAAGTCCC 58.341 50.000 7.86 0.00 0.00 4.46
3626 3936 5.824624 TCAATATGTCTGGCTCTTCCATTTC 59.175 40.000 0.00 0.00 45.50 2.17
3684 3994 5.581126 ATGCCGATCAACAACATAAACAT 57.419 34.783 0.00 0.00 0.00 2.71
3699 4009 7.148188 CCAATGAGCAAAATAGTATATGCCGAT 60.148 37.037 14.17 6.74 39.59 4.18
3778 4095 2.669569 TGCGGCTTTCACCTGCTC 60.670 61.111 0.00 0.00 32.67 4.26
3785 4102 2.029288 CTCTTCGCTGCGGCTTTCA 61.029 57.895 23.03 0.00 36.09 2.69
3911 4282 1.542472 TCACATTGGCAGCATCAACTG 59.458 47.619 0.00 0.00 40.80 3.16
3976 4351 9.868277 ATTTTCGCTACAAAATTCCATATTGAA 57.132 25.926 0.00 0.00 33.02 2.69
4279 4665 4.156455 TGGTCTCTGCAACTTCTTTCTT 57.844 40.909 0.00 0.00 0.00 2.52
4358 4744 1.949465 GGGAACGTAGGCCATGTTAG 58.051 55.000 5.01 0.00 36.47 2.34
4458 4862 2.079158 ACAAGTGCTGAATCGTCCATG 58.921 47.619 0.00 0.00 0.00 3.66
4463 4867 1.800805 CTCCACAAGTGCTGAATCGT 58.199 50.000 0.00 0.00 0.00 3.73
4613 5161 3.849911 TCAGTGGTCTTGTCATCGATTC 58.150 45.455 0.00 0.00 0.00 2.52
4644 5192 0.038744 CCTCTCCAGTGGCACCATTT 59.961 55.000 15.27 0.00 0.00 2.32
4709 7900 2.171448 GCTTCAGGCTCCTCTCCAATTA 59.829 50.000 0.00 0.00 38.06 1.40
4774 7968 2.286872 CTCCACTCCAACTGCATCATC 58.713 52.381 0.00 0.00 0.00 2.92
4915 8115 1.374125 CACCGCCGTCTTCACATGA 60.374 57.895 0.00 0.00 0.00 3.07
5064 8264 1.996191 GCTCCTGTTGCTAGAGTTTCG 59.004 52.381 0.00 0.00 0.00 3.46
5181 8423 1.774254 TCCAAGCCCTTGTTCTTCTCA 59.226 47.619 7.21 0.00 38.85 3.27
5184 8426 0.875059 CGTCCAAGCCCTTGTTCTTC 59.125 55.000 7.21 0.00 38.85 2.87
5254 8499 2.901042 GACCCCCATCTGGTCGTC 59.099 66.667 0.00 0.00 42.63 4.20
5457 8702 6.182507 TGTATATACAATGTTCCCCTCCAC 57.817 41.667 13.24 0.00 32.40 4.02
5458 8703 5.908831 ACTGTATATACAATGTTCCCCTCCA 59.091 40.000 16.17 0.00 35.50 3.86
5459 8704 6.435292 ACTGTATATACAATGTTCCCCTCC 57.565 41.667 16.17 0.00 35.50 4.30
5526 8771 1.660575 AACGCCAACAGTCGTCTCG 60.661 57.895 0.00 0.00 38.03 4.04
5527 8772 1.557443 CCAACGCCAACAGTCGTCTC 61.557 60.000 0.00 0.00 38.03 3.36
5528 8773 1.594293 CCAACGCCAACAGTCGTCT 60.594 57.895 0.00 0.00 38.03 4.18
5529 8774 1.828331 GACCAACGCCAACAGTCGTC 61.828 60.000 0.00 0.00 38.03 4.20
5530 8775 1.885850 GACCAACGCCAACAGTCGT 60.886 57.895 0.00 0.00 41.06 4.34
5533 8778 1.227853 GAGGACCAACGCCAACAGT 60.228 57.895 0.00 0.00 0.00 3.55
5547 8792 5.961272 GTTGAAAACTGAAAAACTGGAGGA 58.039 37.500 0.00 0.00 45.32 3.71
5563 8808 3.558418 CGAAGAGAGAAACGGGTTGAAAA 59.442 43.478 0.00 0.00 0.00 2.29
5566 8811 1.604693 GCGAAGAGAGAAACGGGTTGA 60.605 52.381 0.00 0.00 0.00 3.18
5568 8813 0.320508 GGCGAAGAGAGAAACGGGTT 60.321 55.000 0.00 0.00 0.00 4.11
5569 8814 1.186267 AGGCGAAGAGAGAAACGGGT 61.186 55.000 0.00 0.00 0.00 5.28
5601 8856 3.585990 CCCGCGGTGCATGATTCC 61.586 66.667 26.12 0.00 0.00 3.01
5614 8869 1.792118 GAAACCACAGACCAACCCGC 61.792 60.000 0.00 0.00 0.00 6.13
5615 8870 0.464735 TGAAACCACAGACCAACCCG 60.465 55.000 0.00 0.00 0.00 5.28
5624 8879 9.419737 CGTTATTCAAAAATTTTGAAACCACAG 57.580 29.630 29.88 18.19 41.16 3.66
5628 8883 8.828029 TTGCGTTATTCAAAAATTTTGAAACC 57.172 26.923 29.88 20.71 41.16 3.27
5744 8999 7.765360 TGTTCATCTTTTGAGAAAATGTTTGCT 59.235 29.630 0.00 0.00 35.27 3.91
5745 9000 7.908230 TGTTCATCTTTTGAGAAAATGTTTGC 58.092 30.769 0.00 0.00 35.27 3.68
5774 9029 9.827411 TTAAAACAATGTTTGGCTTTGTAAAAC 57.173 25.926 12.50 0.00 42.36 2.43
5843 9098 4.398044 ACGTCATGTTCAGGTTCAGTTTTT 59.602 37.500 0.00 0.00 0.00 1.94
5846 9101 2.872245 CACGTCATGTTCAGGTTCAGTT 59.128 45.455 0.00 0.00 0.00 3.16
5847 9102 2.102420 TCACGTCATGTTCAGGTTCAGT 59.898 45.455 0.00 0.00 0.00 3.41
5848 9103 2.754472 TCACGTCATGTTCAGGTTCAG 58.246 47.619 0.00 0.00 0.00 3.02
5850 9105 2.869801 TGTTCACGTCATGTTCAGGTTC 59.130 45.455 0.00 0.00 0.00 3.62
5851 9106 2.912771 TGTTCACGTCATGTTCAGGTT 58.087 42.857 0.00 0.00 0.00 3.50
5852 9107 2.613026 TGTTCACGTCATGTTCAGGT 57.387 45.000 0.00 0.00 0.00 4.00
5853 9108 3.748048 AGAATGTTCACGTCATGTTCAGG 59.252 43.478 0.00 0.00 0.00 3.86
5854 9109 4.377738 CCAGAATGTTCACGTCATGTTCAG 60.378 45.833 0.00 0.00 0.00 3.02
5855 9110 3.498018 CCAGAATGTTCACGTCATGTTCA 59.502 43.478 0.00 0.00 0.00 3.18
5856 9111 3.745975 TCCAGAATGTTCACGTCATGTTC 59.254 43.478 0.00 0.00 0.00 3.18
5857 9112 3.738982 TCCAGAATGTTCACGTCATGTT 58.261 40.909 0.00 0.00 0.00 2.71
5858 9113 3.401033 TCCAGAATGTTCACGTCATGT 57.599 42.857 0.00 0.00 0.00 3.21
5859 9114 3.064408 CCATCCAGAATGTTCACGTCATG 59.936 47.826 0.00 0.00 33.13 3.07
5860 9115 3.273434 CCATCCAGAATGTTCACGTCAT 58.727 45.455 0.00 0.00 33.13 3.06
5861 9116 2.038426 ACCATCCAGAATGTTCACGTCA 59.962 45.455 0.00 0.00 33.13 4.35
5862 9117 2.699954 ACCATCCAGAATGTTCACGTC 58.300 47.619 0.00 0.00 33.13 4.34
5863 9118 2.859165 ACCATCCAGAATGTTCACGT 57.141 45.000 0.00 0.00 33.13 4.49
5864 9119 2.094258 CGAACCATCCAGAATGTTCACG 59.906 50.000 11.08 0.00 33.13 4.35
5865 9120 2.159517 GCGAACCATCCAGAATGTTCAC 60.160 50.000 11.08 1.38 33.13 3.18
5866 9121 2.083774 GCGAACCATCCAGAATGTTCA 58.916 47.619 11.08 0.00 33.13 3.18
5867 9122 2.083774 TGCGAACCATCCAGAATGTTC 58.916 47.619 0.00 0.00 33.13 3.18
5868 9123 2.198827 TGCGAACCATCCAGAATGTT 57.801 45.000 0.00 0.00 33.13 2.71
5869 9124 2.198827 TTGCGAACCATCCAGAATGT 57.801 45.000 0.00 0.00 33.13 2.71
5870 9125 3.244976 GTTTTGCGAACCATCCAGAATG 58.755 45.455 0.00 0.00 34.93 2.67
5871 9126 2.231235 GGTTTTGCGAACCATCCAGAAT 59.769 45.455 14.89 0.00 40.03 2.40
5872 9127 1.611491 GGTTTTGCGAACCATCCAGAA 59.389 47.619 14.89 0.00 40.03 3.02
5873 9128 1.243902 GGTTTTGCGAACCATCCAGA 58.756 50.000 14.89 0.00 40.03 3.86
5874 9129 0.958091 TGGTTTTGCGAACCATCCAG 59.042 50.000 17.67 0.00 44.74 3.86
5875 9130 3.117657 TGGTTTTGCGAACCATCCA 57.882 47.368 17.67 7.47 44.74 3.41
5880 9135 3.159353 AGTTTCTTGGTTTTGCGAACC 57.841 42.857 13.35 13.35 40.67 3.62
5881 9136 5.164606 TCTAGTTTCTTGGTTTTGCGAAC 57.835 39.130 0.00 0.00 0.00 3.95
5882 9137 5.821516 TTCTAGTTTCTTGGTTTTGCGAA 57.178 34.783 0.00 0.00 0.00 4.70
5883 9138 6.483974 TGTATTCTAGTTTCTTGGTTTTGCGA 59.516 34.615 0.00 0.00 0.00 5.10
5884 9139 6.664515 TGTATTCTAGTTTCTTGGTTTTGCG 58.335 36.000 0.00 0.00 0.00 4.85
5885 9140 7.542130 CCATGTATTCTAGTTTCTTGGTTTTGC 59.458 37.037 0.00 0.00 0.00 3.68
5886 9141 8.792633 TCCATGTATTCTAGTTTCTTGGTTTTG 58.207 33.333 0.00 0.00 0.00 2.44
5887 9142 8.934023 TCCATGTATTCTAGTTTCTTGGTTTT 57.066 30.769 0.00 0.00 0.00 2.43
5888 9143 8.934023 TTCCATGTATTCTAGTTTCTTGGTTT 57.066 30.769 0.00 0.00 0.00 3.27
5889 9144 8.793592 GTTTCCATGTATTCTAGTTTCTTGGTT 58.206 33.333 0.00 0.00 0.00 3.67
5890 9145 8.164070 AGTTTCCATGTATTCTAGTTTCTTGGT 58.836 33.333 0.00 0.00 0.00 3.67
5891 9146 8.567285 AGTTTCCATGTATTCTAGTTTCTTGG 57.433 34.615 0.00 0.00 0.00 3.61
5897 9152 9.331282 GCATTCTAGTTTCCATGTATTCTAGTT 57.669 33.333 0.00 0.00 0.00 2.24
5898 9153 8.486210 TGCATTCTAGTTTCCATGTATTCTAGT 58.514 33.333 0.00 0.00 0.00 2.57
5899 9154 8.893219 TGCATTCTAGTTTCCATGTATTCTAG 57.107 34.615 0.00 0.00 0.00 2.43
5900 9155 9.851686 AATGCATTCTAGTTTCCATGTATTCTA 57.148 29.630 5.99 0.00 29.14 2.10
5901 9156 8.757982 AATGCATTCTAGTTTCCATGTATTCT 57.242 30.769 5.99 0.00 29.14 2.40
5906 9161 9.995003 TTTTTAAATGCATTCTAGTTTCCATGT 57.005 25.926 13.38 0.00 0.00 3.21
5961 9216 8.385898 TGATTACCATGTTTCGAGTACTTTTT 57.614 30.769 0.00 0.00 0.00 1.94
5962 9217 7.972832 TGATTACCATGTTTCGAGTACTTTT 57.027 32.000 0.00 0.00 0.00 2.27
5963 9218 7.360946 GCTTGATTACCATGTTTCGAGTACTTT 60.361 37.037 0.00 0.00 0.00 2.66
5964 9219 6.092259 GCTTGATTACCATGTTTCGAGTACTT 59.908 38.462 0.00 0.00 0.00 2.24
5965 9220 5.581085 GCTTGATTACCATGTTTCGAGTACT 59.419 40.000 0.00 0.00 0.00 2.73
5966 9221 5.350365 TGCTTGATTACCATGTTTCGAGTAC 59.650 40.000 0.00 0.00 0.00 2.73
5967 9222 5.483811 TGCTTGATTACCATGTTTCGAGTA 58.516 37.500 0.00 0.00 0.00 2.59
5968 9223 4.323417 TGCTTGATTACCATGTTTCGAGT 58.677 39.130 0.00 0.00 0.00 4.18
5969 9224 4.944962 TGCTTGATTACCATGTTTCGAG 57.055 40.909 0.00 0.00 0.00 4.04
5970 9225 6.993786 TTATGCTTGATTACCATGTTTCGA 57.006 33.333 0.00 0.00 0.00 3.71
5971 9226 6.142798 GCATTATGCTTGATTACCATGTTTCG 59.857 38.462 10.27 0.00 40.96 3.46
5972 9227 7.398834 GCATTATGCTTGATTACCATGTTTC 57.601 36.000 10.27 0.00 40.96 2.78
6275 9709 0.110486 CCACAGGCCACTACCTTGTT 59.890 55.000 5.01 0.00 38.26 2.83
6288 9722 4.133373 CCCATGGGAGGCCACAGG 62.133 72.222 28.27 2.20 37.50 4.00
6289 9723 4.828296 GCCCATGGGAGGCCACAG 62.828 72.222 36.00 4.56 45.16 3.66
6310 9744 2.469516 CGTCTGTAAATGGCCCGGC 61.470 63.158 0.00 0.00 0.00 6.13
6311 9745 1.078708 ACGTCTGTAAATGGCCCGG 60.079 57.895 0.00 0.00 0.00 5.73
6312 9746 1.366111 CCACGTCTGTAAATGGCCCG 61.366 60.000 0.00 0.00 0.00 6.13
6313 9747 2.477880 CCACGTCTGTAAATGGCCC 58.522 57.895 0.00 0.00 0.00 5.80
6316 9750 3.370978 CAGTTAGCCACGTCTGTAAATGG 59.629 47.826 0.00 0.00 35.17 3.16
6317 9751 4.242475 TCAGTTAGCCACGTCTGTAAATG 58.758 43.478 0.00 0.00 0.00 2.32
6318 9752 4.021368 ACTCAGTTAGCCACGTCTGTAAAT 60.021 41.667 0.00 0.00 0.00 1.40
6319 9753 3.319972 ACTCAGTTAGCCACGTCTGTAAA 59.680 43.478 0.00 0.00 0.00 2.01
6320 9754 2.889045 ACTCAGTTAGCCACGTCTGTAA 59.111 45.455 0.00 0.00 0.00 2.41
6321 9755 2.228103 CACTCAGTTAGCCACGTCTGTA 59.772 50.000 0.00 0.00 0.00 2.74
6322 9756 1.000163 CACTCAGTTAGCCACGTCTGT 60.000 52.381 0.00 0.00 0.00 3.41
6323 9757 1.000163 ACACTCAGTTAGCCACGTCTG 60.000 52.381 0.00 0.00 0.00 3.51
6324 9758 1.329256 ACACTCAGTTAGCCACGTCT 58.671 50.000 0.00 0.00 0.00 4.18
6325 9759 2.593257 GTACACTCAGTTAGCCACGTC 58.407 52.381 0.00 0.00 0.00 4.34
6326 9760 1.271656 GGTACACTCAGTTAGCCACGT 59.728 52.381 0.00 0.00 0.00 4.49
6327 9761 1.403780 GGGTACACTCAGTTAGCCACG 60.404 57.143 9.21 0.00 0.00 4.94
6328 9762 1.900486 AGGGTACACTCAGTTAGCCAC 59.100 52.381 14.07 0.00 32.90 5.01
6329 9763 2.320681 AGGGTACACTCAGTTAGCCA 57.679 50.000 14.07 0.00 32.90 4.75
6330 9764 2.098770 CGTAGGGTACACTCAGTTAGCC 59.901 54.545 0.00 6.99 0.00 3.93
6331 9765 2.751806 ACGTAGGGTACACTCAGTTAGC 59.248 50.000 0.00 0.00 0.00 3.09
6332 9766 5.382618 AAACGTAGGGTACACTCAGTTAG 57.617 43.478 15.67 0.62 0.00 2.34
6333 9767 4.083324 CGAAACGTAGGGTACACTCAGTTA 60.083 45.833 15.67 0.00 0.00 2.24
6334 9768 3.304928 CGAAACGTAGGGTACACTCAGTT 60.305 47.826 0.00 6.61 0.00 3.16
6335 9769 2.227388 CGAAACGTAGGGTACACTCAGT 59.773 50.000 0.00 0.00 0.00 3.41
6336 9770 2.860062 CGAAACGTAGGGTACACTCAG 58.140 52.381 0.00 0.00 0.00 3.35
6337 9771 1.068333 GCGAAACGTAGGGTACACTCA 60.068 52.381 0.00 0.00 0.00 3.41
6338 9772 1.200948 AGCGAAACGTAGGGTACACTC 59.799 52.381 0.00 0.00 0.00 3.51
6339 9773 1.251251 AGCGAAACGTAGGGTACACT 58.749 50.000 1.68 1.68 0.00 3.55
6340 9774 2.519963 GTAGCGAAACGTAGGGTACAC 58.480 52.381 14.19 0.00 35.38 2.90
6341 9775 1.472480 GGTAGCGAAACGTAGGGTACA 59.528 52.381 18.31 0.00 36.61 2.90
6342 9776 1.472480 TGGTAGCGAAACGTAGGGTAC 59.528 52.381 11.89 11.89 34.74 3.34
6343 9777 1.745087 CTGGTAGCGAAACGTAGGGTA 59.255 52.381 0.00 0.00 0.00 3.69
6344 9778 0.529378 CTGGTAGCGAAACGTAGGGT 59.471 55.000 0.00 0.00 0.00 4.34
6345 9779 0.804933 GCTGGTAGCGAAACGTAGGG 60.805 60.000 0.00 0.00 0.00 3.53
6346 9780 2.662150 GCTGGTAGCGAAACGTAGG 58.338 57.895 0.00 0.00 0.00 3.18
6356 9790 0.038159 AACTGTGTCTCGCTGGTAGC 60.038 55.000 0.00 0.00 38.02 3.58
6357 9791 1.702886 CAACTGTGTCTCGCTGGTAG 58.297 55.000 0.00 0.00 0.00 3.18
6358 9792 0.319555 GCAACTGTGTCTCGCTGGTA 60.320 55.000 0.00 0.00 0.00 3.25
6359 9793 1.595382 GCAACTGTGTCTCGCTGGT 60.595 57.895 0.00 0.00 0.00 4.00
6360 9794 2.661566 CGCAACTGTGTCTCGCTGG 61.662 63.158 0.00 0.00 0.00 4.85
6361 9795 2.849007 CGCAACTGTGTCTCGCTG 59.151 61.111 0.00 0.00 0.00 5.18
6362 9796 3.038417 GCGCAACTGTGTCTCGCT 61.038 61.111 0.30 0.00 42.19 4.93
6363 9797 4.077188 GGCGCAACTGTGTCTCGC 62.077 66.667 10.83 0.00 44.39 5.03
6364 9798 0.666274 TAAGGCGCAACTGTGTCTCG 60.666 55.000 10.83 0.00 39.92 4.04
6365 9799 0.790814 GTAAGGCGCAACTGTGTCTC 59.209 55.000 10.83 0.00 39.92 3.36
6366 9800 0.105964 TGTAAGGCGCAACTGTGTCT 59.894 50.000 10.83 0.00 43.06 3.41
6367 9801 0.234884 GTGTAAGGCGCAACTGTGTC 59.765 55.000 10.83 0.00 0.00 3.67
6368 9802 1.164041 GGTGTAAGGCGCAACTGTGT 61.164 55.000 10.83 0.00 0.00 3.72
6369 9803 0.884704 AGGTGTAAGGCGCAACTGTG 60.885 55.000 10.83 0.00 31.90 3.66
6370 9804 1.450211 AGGTGTAAGGCGCAACTGT 59.550 52.632 10.83 0.00 31.90 3.55
6371 9805 4.379174 AGGTGTAAGGCGCAACTG 57.621 55.556 10.83 0.00 31.90 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.