Multiple sequence alignment - TraesCS7B01G384500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G384500 chr7B 100.000 4795 0 0 1 4795 650242586 650237792 0.000000e+00 8855.0
1 TraesCS7B01G384500 chr7B 79.964 1098 127 45 1015 2047 267243107 267242038 0.000000e+00 723.0
2 TraesCS7B01G384500 chr7B 82.850 414 30 14 4297 4673 650217388 650216979 2.770000e-87 333.0
3 TraesCS7B01G384500 chr7B 82.275 378 43 17 3146 3515 267240795 267240434 6.030000e-79 305.0
4 TraesCS7B01G384500 chr7B 88.889 198 22 0 2646 2843 267241513 267241316 1.330000e-60 244.0
5 TraesCS7B01G384500 chr7B 86.131 137 18 1 564 699 78249372 78249508 3.870000e-31 147.0
6 TraesCS7B01G384500 chr7B 87.805 123 15 0 2368 2490 267241791 267241669 1.390000e-30 145.0
7 TraesCS7B01G384500 chr7B 88.991 109 12 0 2896 3004 267241214 267241106 8.370000e-28 135.0
8 TraesCS7B01G384500 chr7B 86.813 91 12 0 2145 2235 267241972 267241882 8.490000e-18 102.0
9 TraesCS7B01G384500 chr7B 94.444 54 2 1 4679 4732 650216833 650216781 1.110000e-11 82.4
10 TraesCS7B01G384500 chr7B 100.000 28 0 0 2601 2628 267241579 267241552 9.000000e-03 52.8
11 TraesCS7B01G384500 chr7A 86.882 1395 85 33 890 2249 674301034 674299703 0.000000e+00 1472.0
12 TraesCS7B01G384500 chr7A 86.364 1056 86 27 3121 4147 674298923 674297897 0.000000e+00 1099.0
13 TraesCS7B01G384500 chr7A 83.195 845 95 29 1230 2047 303964486 303965310 0.000000e+00 730.0
14 TraesCS7B01G384500 chr7A 86.747 664 42 21 2363 3004 674299596 674298957 0.000000e+00 697.0
15 TraesCS7B01G384500 chr7A 84.951 412 53 8 102 508 674301597 674301190 4.470000e-110 409.0
16 TraesCS7B01G384500 chr7A 82.927 410 37 15 4151 4558 674291935 674291557 5.940000e-89 339.0
17 TraesCS7B01G384500 chr7A 83.198 369 46 9 2646 3004 303965859 303966221 1.660000e-84 324.0
18 TraesCS7B01G384500 chr7A 99.270 137 1 0 709 845 138526446 138526582 1.030000e-61 248.0
19 TraesCS7B01G384500 chr7A 79.087 416 42 21 3119 3517 303966538 303966925 1.330000e-60 244.0
20 TraesCS7B01G384500 chr7A 98.507 134 2 0 713 846 660452111 660451978 2.230000e-58 237.0
21 TraesCS7B01G384500 chr7A 86.179 123 17 0 2368 2490 303965587 303965709 3.010000e-27 134.0
22 TraesCS7B01G384500 chr7A 88.679 106 7 3 4679 4781 674291296 674291193 1.810000e-24 124.0
23 TraesCS7B01G384500 chr7A 94.340 53 3 0 4623 4675 674291440 674291388 1.110000e-11 82.4
24 TraesCS7B01G384500 chr7A 100.000 29 0 0 2600 2628 303965792 303965820 2.000000e-03 54.7
25 TraesCS7B01G384500 chr7D 86.706 1196 118 25 3121 4301 582463611 582462442 0.000000e+00 1290.0
26 TraesCS7B01G384500 chr7D 86.171 1251 98 30 1774 2998 582465321 582464120 0.000000e+00 1282.0
27 TraesCS7B01G384500 chr7D 89.416 907 60 15 890 1776 582502184 582501294 0.000000e+00 1110.0
28 TraesCS7B01G384500 chr7D 82.786 883 91 31 1020 1872 271767648 271768499 0.000000e+00 732.0
29 TraesCS7B01G384500 chr7D 82.549 510 52 17 1 494 582502935 582502447 9.600000e-112 414.0
30 TraesCS7B01G384500 chr7D 90.404 198 19 0 2646 2843 271769375 271769572 1.320000e-65 261.0
31 TraesCS7B01G384500 chr7D 81.746 252 29 4 3281 3515 271770204 271770455 1.360000e-45 195.0
32 TraesCS7B01G384500 chr7D 90.435 115 9 2 3119 3232 271770023 271770136 2.990000e-32 150.0
33 TraesCS7B01G384500 chr7D 86.992 123 16 0 2368 2490 271769108 271769230 6.470000e-29 139.0
34 TraesCS7B01G384500 chr7D 88.393 112 9 2 4568 4675 582462245 582462134 1.080000e-26 132.0
35 TraesCS7B01G384500 chr7D 87.097 93 8 1 2916 3004 271769608 271769700 8.490000e-18 102.0
36 TraesCS7B01G384500 chr7D 94.231 52 3 0 3073 3124 175780682 175780733 3.980000e-11 80.5
37 TraesCS7B01G384500 chr7D 100.000 28 0 0 2601 2628 271769309 271769336 9.000000e-03 52.8
38 TraesCS7B01G384500 chr1A 100.000 134 0 0 712 845 515766159 515766026 1.030000e-61 248.0
39 TraesCS7B01G384500 chr1A 100.000 130 0 0 714 843 438321778 438321649 1.720000e-59 241.0
40 TraesCS7B01G384500 chr1A 83.893 149 22 2 568 715 495446050 495445903 1.800000e-29 141.0
41 TraesCS7B01G384500 chr6A 99.259 135 1 0 714 848 132950181 132950315 1.330000e-60 244.0
42 TraesCS7B01G384500 chr6A 86.765 68 8 1 3054 3121 25634497 25634563 1.850000e-09 75.0
43 TraesCS7B01G384500 chr6B 98.507 134 2 0 712 845 241540613 241540480 2.230000e-58 237.0
44 TraesCS7B01G384500 chr6B 90.278 72 6 1 3054 3125 16341431 16341361 5.110000e-15 93.5
45 TraesCS7B01G384500 chr6B 85.915 71 9 1 3054 3124 712194258 712194189 1.850000e-09 75.0
46 TraesCS7B01G384500 chr3B 97.810 137 3 0 710 846 394944683 394944547 2.230000e-58 237.0
47 TraesCS7B01G384500 chr3A 98.507 134 2 0 710 843 741623261 741623394 2.230000e-58 237.0
48 TraesCS7B01G384500 chr3A 97.761 134 3 0 710 843 732064191 732064324 1.040000e-56 231.0
49 TraesCS7B01G384500 chr3D 88.321 137 15 1 564 699 479605590 479605726 3.840000e-36 163.0
50 TraesCS7B01G384500 chr3D 83.444 151 21 3 567 716 200383818 200383965 2.330000e-28 137.0
51 TraesCS7B01G384500 chr3D 89.706 68 6 1 3054 3121 313178329 313178395 8.550000e-13 86.1
52 TraesCS7B01G384500 chr5D 84.713 157 18 5 562 716 412100093 412100245 8.310000e-33 152.0
53 TraesCS7B01G384500 chr5D 87.654 81 8 2 3054 3133 441906491 441906570 5.110000e-15 93.5
54 TraesCS7B01G384500 chr5D 82.000 100 13 4 300 398 536542996 536542901 3.980000e-11 80.5
55 TraesCS7B01G384500 chr1D 86.567 134 16 2 567 699 493221918 493221786 3.870000e-31 147.0
56 TraesCS7B01G384500 chr4D 85.507 138 18 2 563 699 355442443 355442579 5.000000e-30 143.0
57 TraesCS7B01G384500 chr4D 84.000 150 21 2 567 716 401095860 401095714 1.800000e-29 141.0
58 TraesCS7B01G384500 chr2D 85.211 142 18 3 567 706 291991893 291992033 5.000000e-30 143.0
59 TraesCS7B01G384500 chr2D 82.759 87 10 4 300 383 647276505 647276421 6.660000e-09 73.1
60 TraesCS7B01G384500 chr2A 86.139 101 10 3 300 398 667950123 667950221 6.560000e-19 106.0
61 TraesCS7B01G384500 chr5A 91.304 69 5 1 3066 3133 558300380 558300448 5.110000e-15 93.5
62 TraesCS7B01G384500 chr5A 79.231 130 22 5 297 425 38170476 38170601 8.550000e-13 86.1
63 TraesCS7B01G384500 chr4B 88.571 70 4 3 3054 3120 83310534 83310602 1.110000e-11 82.4
64 TraesCS7B01G384500 chr4B 81.818 99 15 3 300 398 599656145 599656050 3.980000e-11 80.5
65 TraesCS7B01G384500 chr1B 82.474 97 11 5 300 394 60259020 60259112 3.980000e-11 80.5
66 TraesCS7B01G384500 chr1B 87.879 66 6 2 3054 3119 191709643 191709580 5.150000e-10 76.8
67 TraesCS7B01G384500 chr1B 73.016 189 50 1 4084 4272 683585759 683585946 1.110000e-06 65.8
68 TraesCS7B01G384500 chr2B 81.188 101 14 4 300 398 790495163 790495260 5.150000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G384500 chr7B 650237792 650242586 4794 True 8855.000000 8855 100.000000 1 4795 1 chr7B.!!$R1 4794
1 TraesCS7B01G384500 chr7B 267240434 267243107 2673 True 243.828571 723 87.819571 1015 3515 7 chr7B.!!$R2 2500
2 TraesCS7B01G384500 chr7B 650216781 650217388 607 True 207.700000 333 88.647000 4297 4732 2 chr7B.!!$R3 435
3 TraesCS7B01G384500 chr7A 674297897 674301597 3700 True 919.250000 1472 86.236000 102 4147 4 chr7A.!!$R3 4045
4 TraesCS7B01G384500 chr7A 303964486 303966925 2439 False 297.340000 730 86.331800 1230 3517 5 chr7A.!!$F2 2287
5 TraesCS7B01G384500 chr7D 582462134 582465321 3187 True 901.333333 1290 87.090000 1774 4675 3 chr7D.!!$R1 2901
6 TraesCS7B01G384500 chr7D 582501294 582502935 1641 True 762.000000 1110 85.982500 1 1776 2 chr7D.!!$R2 1775
7 TraesCS7B01G384500 chr7D 271767648 271770455 2807 False 233.114286 732 88.494286 1020 3515 7 chr7D.!!$F2 2495

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
286 302 0.092351 CCCGAACAAACGATTCGTCG 59.908 55.0 12.80 10.85 45.88 5.12 F
739 772 0.178301 GTTCGGAATCCCTCCACTCC 59.822 60.0 0.00 0.00 45.74 3.85 F
2267 2686 0.179048 TCCAATTCTGCATCGGCGAT 60.179 50.0 18.14 18.14 45.35 4.58 F
3269 4623 0.104855 ATGTGTGCGTCTGTCTGTGT 59.895 50.0 0.00 0.00 0.00 3.72 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1206 1306 0.176680 ACGCCACCATGAGCTAGAAG 59.823 55.0 0.00 0.0 0.00 2.85 R
2517 3020 0.032515 TGCTACGAGGGAGGGATGAA 60.033 55.0 0.00 0.0 0.00 2.57 R
3694 5106 0.041488 GTGTGTCGTCGTCGTCTTCT 60.041 55.0 1.33 0.0 38.33 2.85 R
4768 6399 0.041576 GACCACGCCTGTTCGTTTTC 60.042 55.0 0.00 0.0 41.21 2.29 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
52 64 2.399396 ATGTTCACAAAACCGCTTCG 57.601 45.000 0.00 0.00 0.00 3.79
53 65 0.248296 TGTTCACAAAACCGCTTCGC 60.248 50.000 0.00 0.00 0.00 4.70
73 85 2.260869 CCAAGTGGCAAGGGTGTCG 61.261 63.158 0.00 0.00 29.15 4.35
78 90 4.947147 GGCAAGGGTGTCGCCACA 62.947 66.667 4.48 0.00 45.52 4.17
150 165 8.980481 TTGTGAAAAGAAAAGAAGATAGGACT 57.020 30.769 0.00 0.00 0.00 3.85
164 179 8.435187 AGAAGATAGGACTTTTGATATGATGCA 58.565 33.333 0.00 0.00 0.00 3.96
165 180 7.976135 AGATAGGACTTTTGATATGATGCAC 57.024 36.000 0.00 0.00 0.00 4.57
193 208 2.221981 GTGAACGAGTCTGAAAAGCTGG 59.778 50.000 0.00 0.00 0.00 4.85
216 231 2.914379 GTACAAGTCTTGTGCCGCT 58.086 52.632 25.41 2.70 45.03 5.52
218 233 1.993370 GTACAAGTCTTGTGCCGCTAG 59.007 52.381 25.41 0.00 45.03 3.42
223 238 3.188786 CTTGTGCCGCTAGTCGCC 61.189 66.667 0.00 0.00 36.73 5.54
238 253 0.391597 TCGCCCCAGATAATCGAACC 59.608 55.000 0.00 0.00 0.00 3.62
254 269 2.805671 CGAACCACAACTAGCATGTTCA 59.194 45.455 0.00 0.00 33.48 3.18
278 294 2.657184 GGAAAACATCCCGAACAAACG 58.343 47.619 0.00 0.00 43.00 3.60
286 302 0.092351 CCCGAACAAACGATTCGTCG 59.908 55.000 12.80 10.85 45.88 5.12
484 504 5.737290 GTGCGAACAACAATGTACATATTCC 59.263 40.000 9.21 4.33 39.40 3.01
486 506 6.819146 TGCGAACAACAATGTACATATTCCTA 59.181 34.615 9.21 0.00 39.40 2.94
487 507 7.334671 TGCGAACAACAATGTACATATTCCTAA 59.665 33.333 9.21 0.00 39.40 2.69
518 538 8.934023 AATAAAAATACAACCTCCACTCAGAA 57.066 30.769 0.00 0.00 0.00 3.02
519 539 8.934023 ATAAAAATACAACCTCCACTCAGAAA 57.066 30.769 0.00 0.00 0.00 2.52
520 540 7.654022 AAAAATACAACCTCCACTCAGAAAA 57.346 32.000 0.00 0.00 0.00 2.29
521 541 7.839680 AAAATACAACCTCCACTCAGAAAAT 57.160 32.000 0.00 0.00 0.00 1.82
522 542 8.934023 AAAATACAACCTCCACTCAGAAAATA 57.066 30.769 0.00 0.00 0.00 1.40
523 543 8.934023 AAATACAACCTCCACTCAGAAAATAA 57.066 30.769 0.00 0.00 0.00 1.40
524 544 9.533831 AAATACAACCTCCACTCAGAAAATAAT 57.466 29.630 0.00 0.00 0.00 1.28
527 547 8.934023 ACAACCTCCACTCAGAAAATAATAAA 57.066 30.769 0.00 0.00 0.00 1.40
528 548 9.362151 ACAACCTCCACTCAGAAAATAATAAAA 57.638 29.630 0.00 0.00 0.00 1.52
558 578 9.939424 ATATACAACCCTATACTCCCTCTATTC 57.061 37.037 0.00 0.00 0.00 1.75
559 579 5.404395 ACAACCCTATACTCCCTCTATTCC 58.596 45.833 0.00 0.00 0.00 3.01
560 580 5.102783 ACAACCCTATACTCCCTCTATTCCA 60.103 44.000 0.00 0.00 0.00 3.53
561 581 5.698369 ACCCTATACTCCCTCTATTCCAA 57.302 43.478 0.00 0.00 0.00 3.53
562 582 6.051946 ACCCTATACTCCCTCTATTCCAAA 57.948 41.667 0.00 0.00 0.00 3.28
563 583 6.458784 ACCCTATACTCCCTCTATTCCAAAA 58.541 40.000 0.00 0.00 0.00 2.44
564 584 7.089566 ACCCTATACTCCCTCTATTCCAAAAT 58.910 38.462 0.00 0.00 0.00 1.82
565 585 7.017651 ACCCTATACTCCCTCTATTCCAAAATG 59.982 40.741 0.00 0.00 0.00 2.32
566 586 7.017651 CCCTATACTCCCTCTATTCCAAAATGT 59.982 40.741 0.00 0.00 0.00 2.71
567 587 9.101325 CCTATACTCCCTCTATTCCAAAATGTA 57.899 37.037 0.00 0.00 0.00 2.29
571 591 6.126739 ACTCCCTCTATTCCAAAATGTACTCC 60.127 42.308 0.00 0.00 0.00 3.85
579 599 3.073356 TCCAAAATGTACTCCCTCCGTTT 59.927 43.478 0.00 0.00 0.00 3.60
584 604 5.952347 AATGTACTCCCTCCGTTTCTAAT 57.048 39.130 0.00 0.00 0.00 1.73
596 616 9.392259 CCCTCCGTTTCTAATTATAAGTCTTTT 57.608 33.333 0.00 0.00 0.00 2.27
719 741 8.691661 TCAAAGGAATTGTATATTTAGGGAGC 57.308 34.615 0.00 0.00 40.11 4.70
721 743 6.435292 AGGAATTGTATATTTAGGGAGCGT 57.565 37.500 0.00 0.00 0.00 5.07
722 744 6.838382 AGGAATTGTATATTTAGGGAGCGTT 58.162 36.000 0.00 0.00 0.00 4.84
723 745 6.935208 AGGAATTGTATATTTAGGGAGCGTTC 59.065 38.462 0.00 0.00 0.00 3.95
725 747 4.247267 TGTATATTTAGGGAGCGTTCGG 57.753 45.455 0.00 0.00 0.00 4.30
726 748 3.890756 TGTATATTTAGGGAGCGTTCGGA 59.109 43.478 0.00 0.00 0.00 4.55
727 749 4.341806 TGTATATTTAGGGAGCGTTCGGAA 59.658 41.667 0.00 0.00 0.00 4.30
728 750 4.618920 ATATTTAGGGAGCGTTCGGAAT 57.381 40.909 0.00 0.00 0.00 3.01
729 751 2.304751 TTTAGGGAGCGTTCGGAATC 57.695 50.000 0.00 0.00 0.00 2.52
739 772 0.178301 GTTCGGAATCCCTCCACTCC 59.822 60.000 0.00 0.00 45.74 3.85
740 773 0.981277 TTCGGAATCCCTCCACTCCC 60.981 60.000 0.00 0.00 45.74 4.30
741 774 2.797278 CGGAATCCCTCCACTCCCG 61.797 68.421 0.00 0.00 45.74 5.14
743 776 1.403687 GGAATCCCTCCACTCCCGAG 61.404 65.000 0.00 0.00 44.67 4.63
744 777 0.688087 GAATCCCTCCACTCCCGAGT 60.688 60.000 0.00 0.00 43.61 4.18
745 778 0.688087 AATCCCTCCACTCCCGAGTC 60.688 60.000 0.00 0.00 40.20 3.36
746 779 1.875422 ATCCCTCCACTCCCGAGTCA 61.875 60.000 0.00 0.00 40.20 3.41
747 780 2.055042 CCCTCCACTCCCGAGTCAG 61.055 68.421 0.00 0.00 40.20 3.51
748 781 2.716017 CCTCCACTCCCGAGTCAGC 61.716 68.421 0.00 0.00 40.20 4.26
749 782 1.680651 CTCCACTCCCGAGTCAGCT 60.681 63.158 0.00 0.00 40.20 4.24
750 783 1.662438 CTCCACTCCCGAGTCAGCTC 61.662 65.000 0.00 0.00 40.20 4.09
782 815 3.769201 GCTGCAGGCTGAAAAGGT 58.231 55.556 20.86 0.00 38.06 3.50
783 816 1.288127 GCTGCAGGCTGAAAAGGTG 59.712 57.895 20.86 0.00 38.06 4.00
784 817 1.962144 CTGCAGGCTGAAAAGGTGG 59.038 57.895 20.86 0.00 0.00 4.61
785 818 0.538057 CTGCAGGCTGAAAAGGTGGA 60.538 55.000 20.86 0.00 0.00 4.02
786 819 0.538057 TGCAGGCTGAAAAGGTGGAG 60.538 55.000 20.86 0.00 0.00 3.86
787 820 1.871126 GCAGGCTGAAAAGGTGGAGC 61.871 60.000 20.86 0.00 0.00 4.70
788 821 0.251077 CAGGCTGAAAAGGTGGAGCT 60.251 55.000 9.42 0.00 0.00 4.09
789 822 0.251077 AGGCTGAAAAGGTGGAGCTG 60.251 55.000 0.00 0.00 0.00 4.24
790 823 1.246737 GGCTGAAAAGGTGGAGCTGG 61.247 60.000 0.00 0.00 0.00 4.85
791 824 1.246737 GCTGAAAAGGTGGAGCTGGG 61.247 60.000 0.00 0.00 0.00 4.45
792 825 0.401738 CTGAAAAGGTGGAGCTGGGA 59.598 55.000 0.00 0.00 0.00 4.37
793 826 1.005215 CTGAAAAGGTGGAGCTGGGAT 59.995 52.381 0.00 0.00 0.00 3.85
794 827 2.239654 CTGAAAAGGTGGAGCTGGGATA 59.760 50.000 0.00 0.00 0.00 2.59
795 828 2.852449 TGAAAAGGTGGAGCTGGGATAT 59.148 45.455 0.00 0.00 0.00 1.63
796 829 4.044308 TGAAAAGGTGGAGCTGGGATATA 58.956 43.478 0.00 0.00 0.00 0.86
797 830 4.141482 TGAAAAGGTGGAGCTGGGATATAC 60.141 45.833 0.00 0.00 0.00 1.47
798 831 1.633774 AGGTGGAGCTGGGATATACG 58.366 55.000 0.00 0.00 0.00 3.06
800 833 0.388649 GTGGAGCTGGGATATACGCG 60.389 60.000 3.53 3.53 0.00 6.01
801 834 1.446272 GGAGCTGGGATATACGCGC 60.446 63.158 5.73 0.00 0.00 6.86
802 835 1.587054 GAGCTGGGATATACGCGCT 59.413 57.895 5.73 0.00 41.00 5.92
804 837 1.446272 GCTGGGATATACGCGCTCC 60.446 63.158 5.73 7.59 0.00 4.70
805 838 1.154016 CTGGGATATACGCGCTCCG 60.154 63.158 5.73 0.00 44.21 4.63
849 882 1.450025 CCGAACAGGCCCTTAGAAAC 58.550 55.000 0.00 0.00 0.00 2.78
850 883 1.076332 CGAACAGGCCCTTAGAAACG 58.924 55.000 0.00 0.00 0.00 3.60
856 939 1.681076 GCCCTTAGAAACGGTGGGA 59.319 57.895 0.00 0.00 40.23 4.37
857 940 0.392595 GCCCTTAGAAACGGTGGGAG 60.393 60.000 0.00 0.00 40.23 4.30
861 944 2.830321 CCTTAGAAACGGTGGGAGTAGT 59.170 50.000 0.00 0.00 0.00 2.73
882 965 9.628500 AGTAGTATTTTCTGAAAGTCAAACCTT 57.372 29.630 1.14 0.00 33.76 3.50
884 967 8.293699 AGTATTTTCTGAAAGTCAAACCTTGT 57.706 30.769 1.14 0.00 33.76 3.16
885 968 8.749354 AGTATTTTCTGAAAGTCAAACCTTGTT 58.251 29.630 1.14 0.00 33.76 2.83
886 969 9.366216 GTATTTTCTGAAAGTCAAACCTTGTTT 57.634 29.630 1.14 0.00 33.76 2.83
887 970 7.650834 TTTTCTGAAAGTCAAACCTTGTTTG 57.349 32.000 12.33 12.33 33.76 2.93
888 971 6.582677 TTCTGAAAGTCAAACCTTGTTTGA 57.417 33.333 16.16 16.16 36.21 2.69
889 972 6.773976 TCTGAAAGTCAAACCTTGTTTGAT 57.226 33.333 21.23 9.18 40.12 2.57
890 973 6.795399 TCTGAAAGTCAAACCTTGTTTGATC 58.205 36.000 21.23 16.12 40.12 2.92
891 974 6.376864 TCTGAAAGTCAAACCTTGTTTGATCA 59.623 34.615 21.23 18.85 40.12 2.92
892 975 6.929625 TGAAAGTCAAACCTTGTTTGATCAA 58.070 32.000 21.23 3.38 40.12 2.57
893 976 7.382110 TGAAAGTCAAACCTTGTTTGATCAAA 58.618 30.769 21.23 16.91 40.12 2.69
928 1011 5.181009 CCACCACAGTATATATCCAGCATG 58.819 45.833 0.00 0.00 0.00 4.06
929 1012 4.633126 CACCACAGTATATATCCAGCATGC 59.367 45.833 10.51 10.51 31.97 4.06
930 1013 4.286808 ACCACAGTATATATCCAGCATGCA 59.713 41.667 21.98 0.00 31.97 3.96
931 1014 5.045359 ACCACAGTATATATCCAGCATGCAT 60.045 40.000 21.98 7.39 31.97 3.96
932 1015 5.526479 CCACAGTATATATCCAGCATGCATC 59.474 44.000 21.98 0.00 31.97 3.91
933 1016 6.110707 CACAGTATATATCCAGCATGCATCA 58.889 40.000 21.98 2.29 31.97 3.07
979 1062 2.356194 TCCACGACGAGACGACGA 60.356 61.111 19.71 0.00 46.01 4.20
980 1063 2.096030 CCACGACGAGACGACGAG 59.904 66.667 19.71 12.97 46.01 4.18
1172 1269 6.509039 CGACCGAGTAAGAAAATTATTTCCCG 60.509 42.308 0.00 0.00 44.96 5.14
1173 1270 5.587443 ACCGAGTAAGAAAATTATTTCCCGG 59.413 40.000 0.00 0.00 44.96 5.73
1191 1291 3.461061 CCGGTCGATCAGTACTACTGTA 58.539 50.000 14.63 4.06 46.03 2.74
1258 1373 1.878775 GCACATGTTCTGGTGGCTC 59.121 57.895 0.00 0.00 35.58 4.70
1341 1460 3.771160 CGGCCCGGTGAGTAGCTT 61.771 66.667 0.00 0.00 0.00 3.74
1342 1461 2.125106 GGCCCGGTGAGTAGCTTG 60.125 66.667 0.00 0.00 0.00 4.01
1343 1462 2.820037 GCCCGGTGAGTAGCTTGC 60.820 66.667 0.00 0.00 0.00 4.01
1344 1463 2.982130 CCCGGTGAGTAGCTTGCT 59.018 61.111 0.00 0.00 0.00 3.91
1345 1464 1.956629 GCCCGGTGAGTAGCTTGCTA 61.957 60.000 0.00 0.00 0.00 3.49
1348 1467 1.204941 CCGGTGAGTAGCTTGCTACTT 59.795 52.381 28.80 16.76 39.95 2.24
1351 1470 2.354203 GGTGAGTAGCTTGCTACTTGCT 60.354 50.000 28.80 12.81 39.95 3.91
1402 1543 9.379770 TGGAGTATCTTCCATACTGATTCAATA 57.620 33.333 0.00 0.00 42.24 1.90
1411 1557 3.909776 ACTGATTCAATATGGCATGCG 57.090 42.857 12.44 0.00 0.00 4.73
1811 1997 1.594293 CAAGTTCGCCGTCACCACT 60.594 57.895 0.00 0.00 0.00 4.00
1879 2080 2.092914 AGCTTGGAGGTACAGCCAATAC 60.093 50.000 16.19 12.42 42.44 1.89
2047 2453 1.473278 GAGGACTCCGTGGTAAGTCTG 59.527 57.143 7.45 0.00 41.34 3.51
2057 2463 4.158025 CCGTGGTAAGTCTGAGTAATGACT 59.842 45.833 0.00 0.00 44.40 3.41
2058 2464 5.356190 CCGTGGTAAGTCTGAGTAATGACTA 59.644 44.000 0.00 0.00 42.02 2.59
2059 2465 6.127814 CCGTGGTAAGTCTGAGTAATGACTAA 60.128 42.308 0.00 0.00 42.02 2.24
2060 2466 7.416438 CCGTGGTAAGTCTGAGTAATGACTAAT 60.416 40.741 0.00 0.00 42.02 1.73
2096 2505 4.593597 TGCAAAAATCGATCGAGTAACC 57.406 40.909 23.84 10.55 0.00 2.85
2150 2559 5.710099 TGGATTCTTGTGGATTGGTTTACTC 59.290 40.000 0.00 0.00 0.00 2.59
2179 2588 4.263572 CAGTTGTCGTGGGGCCCA 62.264 66.667 24.76 24.76 0.00 5.36
2200 2609 2.125512 CTGTACCAGCTGTCCCGC 60.126 66.667 13.81 0.00 0.00 6.13
2260 2679 3.705051 ACCTCACATTCCAATTCTGCAT 58.295 40.909 0.00 0.00 0.00 3.96
2263 2682 2.684374 TCACATTCCAATTCTGCATCGG 59.316 45.455 0.00 0.00 0.00 4.18
2267 2686 0.179048 TCCAATTCTGCATCGGCGAT 60.179 50.000 18.14 18.14 45.35 4.58
2303 2722 7.843490 TTTCAAGAGTACACCAATAGCATAC 57.157 36.000 0.00 0.00 0.00 2.39
2312 2731 9.944376 AGTACACCAATAGCATACCATATTTAG 57.056 33.333 0.00 0.00 0.00 1.85
2313 2732 9.162764 GTACACCAATAGCATACCATATTTAGG 57.837 37.037 0.00 0.00 0.00 2.69
2315 2734 7.883311 ACACCAATAGCATACCATATTTAGGAC 59.117 37.037 0.00 0.00 0.00 3.85
2361 2780 9.018582 ACGTACTTTTGACCTCTACTTATAACT 57.981 33.333 0.00 0.00 0.00 2.24
2441 2913 3.188965 GGAGACGTCGTGGGAGAG 58.811 66.667 10.46 0.00 0.00 3.20
2445 2917 3.343788 GACGTCGTGGGAGAGGCTG 62.344 68.421 0.63 0.00 0.00 4.85
2453 2925 1.305718 GGGAGAGGCTGGAGTCTGT 60.306 63.158 0.00 0.00 0.00 3.41
2490 2993 1.803922 CAACGTCGTGCGCATCCTA 60.804 57.895 15.91 0.00 46.11 2.94
2496 2999 0.464036 TCGTGCGCATCCTATTCCTT 59.536 50.000 15.91 0.00 0.00 3.36
2497 3000 1.134521 TCGTGCGCATCCTATTCCTTT 60.135 47.619 15.91 0.00 0.00 3.11
2498 3001 1.261619 CGTGCGCATCCTATTCCTTTC 59.738 52.381 15.91 0.00 0.00 2.62
2499 3002 1.604278 GTGCGCATCCTATTCCTTTCC 59.396 52.381 15.91 0.00 0.00 3.13
2500 3003 1.490490 TGCGCATCCTATTCCTTTCCT 59.510 47.619 5.66 0.00 0.00 3.36
2501 3004 1.876156 GCGCATCCTATTCCTTTCCTG 59.124 52.381 0.30 0.00 0.00 3.86
2502 3005 2.498167 CGCATCCTATTCCTTTCCTGG 58.502 52.381 0.00 0.00 0.00 4.45
2503 3006 2.234143 GCATCCTATTCCTTTCCTGGC 58.766 52.381 0.00 0.00 0.00 4.85
2504 3007 2.868899 CATCCTATTCCTTTCCTGGCC 58.131 52.381 0.00 0.00 0.00 5.36
2505 3008 1.979809 TCCTATTCCTTTCCTGGCCA 58.020 50.000 4.71 4.71 0.00 5.36
2506 3009 1.846439 TCCTATTCCTTTCCTGGCCAG 59.154 52.381 26.87 26.87 0.00 4.85
2507 3010 1.685148 CTATTCCTTTCCTGGCCAGC 58.315 55.000 28.39 0.00 0.00 4.85
2508 3011 1.213926 CTATTCCTTTCCTGGCCAGCT 59.786 52.381 28.39 5.97 0.00 4.24
2509 3012 1.298953 ATTCCTTTCCTGGCCAGCTA 58.701 50.000 28.39 14.69 0.00 3.32
2510 3013 1.298953 TTCCTTTCCTGGCCAGCTAT 58.701 50.000 28.39 0.00 0.00 2.97
2511 3014 0.839946 TCCTTTCCTGGCCAGCTATC 59.160 55.000 28.39 0.00 0.00 2.08
2512 3015 0.842635 CCTTTCCTGGCCAGCTATCT 59.157 55.000 28.39 0.00 0.00 1.98
2513 3016 1.202746 CCTTTCCTGGCCAGCTATCTC 60.203 57.143 28.39 0.00 0.00 2.75
2514 3017 1.767681 CTTTCCTGGCCAGCTATCTCT 59.232 52.381 28.39 0.00 0.00 3.10
2515 3018 1.885049 TTCCTGGCCAGCTATCTCTT 58.115 50.000 28.39 0.00 0.00 2.85
2516 3019 1.418334 TCCTGGCCAGCTATCTCTTC 58.582 55.000 28.39 0.00 0.00 2.87
2517 3020 1.062581 TCCTGGCCAGCTATCTCTTCT 60.063 52.381 28.39 0.00 0.00 2.85
2518 3021 1.767681 CCTGGCCAGCTATCTCTTCTT 59.232 52.381 28.39 0.00 0.00 2.52
2519 3022 2.224257 CCTGGCCAGCTATCTCTTCTTC 60.224 54.545 28.39 0.00 0.00 2.87
2520 3023 2.433604 CTGGCCAGCTATCTCTTCTTCA 59.566 50.000 22.33 0.00 0.00 3.02
2521 3024 3.044156 TGGCCAGCTATCTCTTCTTCAT 58.956 45.455 0.00 0.00 0.00 2.57
2524 3027 3.556843 GCCAGCTATCTCTTCTTCATCCC 60.557 52.174 0.00 0.00 0.00 3.85
2525 3028 3.903090 CCAGCTATCTCTTCTTCATCCCT 59.097 47.826 0.00 0.00 0.00 4.20
2533 3039 2.243994 TCTTCTTCATCCCTCCCTCGTA 59.756 50.000 0.00 0.00 0.00 3.43
2534 3040 2.366640 TCTTCATCCCTCCCTCGTAG 57.633 55.000 0.00 0.00 0.00 3.51
2538 3054 1.043116 CATCCCTCCCTCGTAGCACA 61.043 60.000 0.00 0.00 0.00 4.57
2542 3058 1.153745 CTCCCTCGTAGCACAGCAC 60.154 63.158 0.00 0.00 0.00 4.40
2581 3108 1.199615 TTGATACATCGTGGGGCTCA 58.800 50.000 0.00 0.00 0.00 4.26
2595 3128 1.577328 GGCTCAATCGTGTGGGTGTG 61.577 60.000 0.00 0.00 0.00 3.82
2596 3129 1.577328 GCTCAATCGTGTGGGTGTGG 61.577 60.000 0.00 0.00 0.00 4.17
2597 3130 1.577328 CTCAATCGTGTGGGTGTGGC 61.577 60.000 0.00 0.00 0.00 5.01
2598 3131 1.896183 CAATCGTGTGGGTGTGGCA 60.896 57.895 0.00 0.00 0.00 4.92
2637 3170 1.289066 CTCAAGGACAACTCGCCGA 59.711 57.895 0.00 0.00 0.00 5.54
2638 3171 0.734253 CTCAAGGACAACTCGCCGAG 60.734 60.000 13.52 13.52 35.52 4.63
2809 3363 2.342279 CGTGTTCGAGGCCCTCAA 59.658 61.111 12.13 1.53 39.71 3.02
2812 3366 1.302511 TGTTCGAGGCCCTCAAAGC 60.303 57.895 12.13 0.75 0.00 3.51
2843 3397 3.637229 TGAATCCTAGAATCCACGAGGTC 59.363 47.826 0.00 0.00 34.92 3.85
2844 3398 1.676746 TCCTAGAATCCACGAGGTCG 58.323 55.000 0.00 0.00 46.33 4.79
2858 3413 4.187594 CGAGGTCGTGATTGATTGATTG 57.812 45.455 0.00 0.00 34.11 2.67
2924 3539 8.066612 ACTAATGGTTCAATTCATTAACCTGG 57.933 34.615 0.00 0.00 42.60 4.45
2936 3555 4.041567 TCATTAACCTGGTGTGAGTGATGT 59.958 41.667 0.00 0.00 0.00 3.06
3004 4098 1.067212 CCATCTACAGCGGACAGGTAC 59.933 57.143 0.00 0.00 0.00 3.34
3006 4100 2.139323 TCTACAGCGGACAGGTACAT 57.861 50.000 0.00 0.00 0.00 2.29
3010 4104 1.412710 ACAGCGGACAGGTACATATGG 59.587 52.381 7.80 0.00 0.00 2.74
3011 4105 1.048601 AGCGGACAGGTACATATGGG 58.951 55.000 7.80 0.00 0.00 4.00
3012 4106 0.756903 GCGGACAGGTACATATGGGT 59.243 55.000 7.80 0.00 0.00 4.51
3013 4107 1.540363 GCGGACAGGTACATATGGGTG 60.540 57.143 7.80 1.34 0.00 4.61
3014 4108 1.760613 CGGACAGGTACATATGGGTGT 59.239 52.381 7.80 4.58 36.13 4.16
3015 4109 2.960384 CGGACAGGTACATATGGGTGTA 59.040 50.000 7.80 0.00 33.62 2.90
3016 4110 3.005472 CGGACAGGTACATATGGGTGTAG 59.995 52.174 7.80 0.00 35.40 2.74
3023 4117 6.709018 GGTACATATGGGTGTAGCAAAAAT 57.291 37.500 7.80 0.00 46.78 1.82
3029 4123 2.243810 GGGTGTAGCAAAAATCCACCA 58.756 47.619 9.13 0.00 45.85 4.17
3038 4132 4.704057 AGCAAAAATCCACCATCTCTCTTC 59.296 41.667 0.00 0.00 0.00 2.87
3046 4140 2.098934 CACCATCTCTCTTCTGTCCGAG 59.901 54.545 0.00 0.00 0.00 4.63
3050 4144 3.697619 TCTCTCTTCTGTCCGAGTACA 57.302 47.619 0.00 0.00 0.00 2.90
3051 4145 4.223556 TCTCTCTTCTGTCCGAGTACAT 57.776 45.455 0.00 0.00 0.00 2.29
3052 4146 4.193090 TCTCTCTTCTGTCCGAGTACATC 58.807 47.826 0.00 0.00 0.00 3.06
3053 4147 3.942115 CTCTCTTCTGTCCGAGTACATCA 59.058 47.826 0.00 0.00 0.00 3.07
3054 4148 3.690139 TCTCTTCTGTCCGAGTACATCAC 59.310 47.826 0.00 0.00 0.00 3.06
3055 4149 3.687125 TCTTCTGTCCGAGTACATCACT 58.313 45.455 0.00 0.00 41.47 3.41
3057 4151 4.634883 TCTTCTGTCCGAGTACATCACTAC 59.365 45.833 0.00 0.00 37.72 2.73
3058 4152 3.276857 TCTGTCCGAGTACATCACTACC 58.723 50.000 0.00 0.00 37.72 3.18
3060 4154 3.276857 TGTCCGAGTACATCACTACCTC 58.723 50.000 0.00 0.00 37.72 3.85
3061 4155 3.054582 TGTCCGAGTACATCACTACCTCT 60.055 47.826 0.00 0.00 37.72 3.69
3062 4156 3.312973 GTCCGAGTACATCACTACCTCTG 59.687 52.174 0.00 0.00 37.72 3.35
3064 4158 4.162888 TCCGAGTACATCACTACCTCTGTA 59.837 45.833 0.00 0.00 37.72 2.74
3066 4160 5.220815 CCGAGTACATCACTACCTCTGTAAC 60.221 48.000 0.00 0.00 37.72 2.50
3068 4162 5.577100 AGTACATCACTACCTCTGTAACCA 58.423 41.667 0.00 0.00 34.98 3.67
3070 4164 5.818678 ACATCACTACCTCTGTAACCAAA 57.181 39.130 0.00 0.00 0.00 3.28
3071 4165 6.182507 ACATCACTACCTCTGTAACCAAAA 57.817 37.500 0.00 0.00 0.00 2.44
3072 4166 6.779860 ACATCACTACCTCTGTAACCAAAAT 58.220 36.000 0.00 0.00 0.00 1.82
3073 4167 7.913789 ACATCACTACCTCTGTAACCAAAATA 58.086 34.615 0.00 0.00 0.00 1.40
3080 4174 9.245962 CTACCTCTGTAACCAAAATATAAGACG 57.754 37.037 0.00 0.00 0.00 4.18
3084 4178 8.556213 TCTGTAACCAAAATATAAGACGCTTT 57.444 30.769 0.00 0.00 0.00 3.51
3101 4195 4.032786 ACGCTTTTGCAGTTCAATTTGAAC 59.967 37.500 27.31 27.31 46.72 3.18
3148 4500 6.910536 AATGAGATCCAACTAATCAACGTC 57.089 37.500 0.00 0.00 0.00 4.34
3193 4545 1.949257 CGCAACCAAGGGAACACTC 59.051 57.895 0.00 0.00 0.00 3.51
3222 4574 1.996191 CGAGAAGCTCAAGTAAGTGCC 59.004 52.381 0.00 0.00 0.00 5.01
3234 4586 0.602638 TAAGTGCCGCAACTCACCTG 60.603 55.000 0.00 0.00 33.90 4.00
3268 4622 2.064573 TATGTGTGCGTCTGTCTGTG 57.935 50.000 0.00 0.00 0.00 3.66
3269 4623 0.104855 ATGTGTGCGTCTGTCTGTGT 59.895 50.000 0.00 0.00 0.00 3.72
3271 4625 0.806102 GTGTGCGTCTGTCTGTGTGT 60.806 55.000 0.00 0.00 0.00 3.72
3273 4627 0.806102 GTGCGTCTGTCTGTGTGTGT 60.806 55.000 0.00 0.00 0.00 3.72
3274 4628 0.805711 TGCGTCTGTCTGTGTGTGTG 60.806 55.000 0.00 0.00 0.00 3.82
3277 4631 1.735700 CGTCTGTCTGTGTGTGTGTGT 60.736 52.381 0.00 0.00 0.00 3.72
3279 4633 2.094258 GTCTGTCTGTGTGTGTGTGTTG 59.906 50.000 0.00 0.00 0.00 3.33
3282 4670 2.482336 TGTCTGTGTGTGTGTGTTGAAC 59.518 45.455 0.00 0.00 0.00 3.18
3289 4677 3.565902 TGTGTGTGTGTTGAACAAGTGAA 59.434 39.130 0.00 0.00 41.57 3.18
3292 4680 5.633182 GTGTGTGTGTTGAACAAGTGAATTT 59.367 36.000 0.00 0.00 41.57 1.82
3304 4692 8.465999 TGAACAAGTGAATTTAACTGTTGATGT 58.534 29.630 2.69 0.00 0.00 3.06
3471 4877 2.158623 GGATCTGGGCACATGGTAATCA 60.159 50.000 0.00 0.00 0.00 2.57
3472 4878 3.499202 GGATCTGGGCACATGGTAATCAT 60.499 47.826 0.00 0.00 36.31 2.45
3473 4879 3.213206 TCTGGGCACATGGTAATCATC 57.787 47.619 0.00 0.00 32.92 2.92
3474 4880 2.509131 TCTGGGCACATGGTAATCATCA 59.491 45.455 0.00 0.00 32.92 3.07
3475 4881 2.620115 CTGGGCACATGGTAATCATCAC 59.380 50.000 0.00 0.00 32.92 3.06
3489 4897 7.013750 TGGTAATCATCACAAACTTGCACTTAA 59.986 33.333 0.00 0.00 0.00 1.85
3490 4898 8.028938 GGTAATCATCACAAACTTGCACTTAAT 58.971 33.333 0.00 0.00 0.00 1.40
3552 4960 3.814842 GTGTGCTGTTATATATGCTGCCA 59.185 43.478 13.95 10.44 0.00 4.92
3560 4968 7.522725 GCTGTTATATATGCTGCCAGTTGAATT 60.523 37.037 0.00 0.00 0.00 2.17
3578 4986 5.022122 TGAATTTCCATGGTGGCTGAAATA 58.978 37.500 12.58 0.00 36.65 1.40
3591 4999 3.437049 GGCTGAAATATAATGCTCGACCC 59.563 47.826 0.00 0.00 0.00 4.46
3592 5000 4.319177 GCTGAAATATAATGCTCGACCCT 58.681 43.478 0.00 0.00 0.00 4.34
3610 5022 1.686741 CCTCTCCTCTGACAGGTACCC 60.687 61.905 8.74 0.00 43.95 3.69
3655 5067 2.205074 GAGATGCTGGGTGACATTACG 58.795 52.381 0.00 0.00 0.00 3.18
3677 5089 1.819903 AGTCTCCTGCTCGGTAGAAAC 59.180 52.381 0.00 0.00 0.00 2.78
3682 5094 2.029290 TCCTGCTCGGTAGAAACAAGAC 60.029 50.000 0.00 0.00 0.00 3.01
3807 5253 7.777095 AGAGAGACATCTGTTTGACCTTATAC 58.223 38.462 0.00 0.00 35.30 1.47
3818 5264 7.137490 GTTTGACCTTATACCAAACAGTACC 57.863 40.000 0.00 0.00 45.19 3.34
3859 5305 3.896888 TGTTACTTTTCGGTGAGAGGGTA 59.103 43.478 0.00 0.00 0.00 3.69
3860 5306 4.529377 TGTTACTTTTCGGTGAGAGGGTAT 59.471 41.667 0.00 0.00 0.00 2.73
3924 5370 2.284625 TGGAGACCTGACGGCCAT 60.285 61.111 2.24 0.00 0.00 4.40
3954 5400 2.010145 TCTCTAACAGGTCATTGCGC 57.990 50.000 0.00 0.00 0.00 6.09
3956 5402 2.028112 TCTCTAACAGGTCATTGCGCTT 60.028 45.455 9.73 0.00 0.00 4.68
4001 5450 5.186942 TCTGCGTTGCTTTGGGTATTAATA 58.813 37.500 0.00 0.00 0.00 0.98
4003 5452 5.642686 TGCGTTGCTTTGGGTATTAATAAC 58.357 37.500 1.56 1.56 0.00 1.89
4051 5502 2.198827 TTGTGTTGGGTGCTGATAGG 57.801 50.000 0.00 0.00 0.00 2.57
4070 5521 2.904434 AGGGACGGTATTTGTTCTGAGT 59.096 45.455 0.00 0.00 0.00 3.41
4107 5558 0.884704 GGTGCGTGATTGTGGTGTCT 60.885 55.000 0.00 0.00 0.00 3.41
4133 5584 0.389948 ATTTCGGAGTCGGTGTCAGC 60.390 55.000 0.00 0.00 36.95 4.26
4148 5599 0.890542 TCAGCCAGTGGTCATTGTGC 60.891 55.000 11.74 0.00 0.00 4.57
4154 5605 2.359850 TGGTCATTGTGCGAGCCC 60.360 61.111 0.00 0.00 0.00 5.19
4159 5610 1.973281 CATTGTGCGAGCCCCTTGT 60.973 57.895 0.00 0.00 0.00 3.16
4174 5625 3.325135 CCCCTTGTAAGCTCCTATTCGAT 59.675 47.826 0.00 0.00 0.00 3.59
4176 5627 5.471257 CCCTTGTAAGCTCCTATTCGATAC 58.529 45.833 0.00 0.00 0.00 2.24
4179 5630 6.016192 CCTTGTAAGCTCCTATTCGATACTGA 60.016 42.308 0.00 0.00 0.00 3.41
4183 5634 6.472686 AAGCTCCTATTCGATACTGAAACT 57.527 37.500 0.00 0.00 0.00 2.66
4190 5641 8.932791 TCCTATTCGATACTGAAACTTTGAAAC 58.067 33.333 0.00 0.00 0.00 2.78
4195 5646 6.423905 TCGATACTGAAACTTTGAAACTCCTG 59.576 38.462 0.00 0.00 0.00 3.86
4196 5647 6.202954 CGATACTGAAACTTTGAAACTCCTGT 59.797 38.462 0.00 0.00 0.00 4.00
4208 5659 9.831737 CTTTGAAACTCCTGTTATAACATTCAG 57.168 33.333 21.70 17.65 35.56 3.02
4223 5674 2.513204 CAGATGAGCTGCCCCACG 60.513 66.667 0.00 0.00 37.90 4.94
4234 5685 2.045340 CCCCACGAAATTCCCGCT 60.045 61.111 0.00 0.00 0.00 5.52
4256 5707 1.831652 CTCAACTCGGCTCCCTGGTT 61.832 60.000 0.00 0.00 0.00 3.67
4267 5718 2.636412 CCCTGGTTCACTCGCTCGA 61.636 63.158 0.00 0.00 0.00 4.04
4278 5729 6.305877 GGTTCACTCGCTCGATTAGTATAATG 59.694 42.308 0.00 0.00 0.00 1.90
4293 5744 8.856153 TTAGTATAATGTTTTCACTTGCTCCA 57.144 30.769 0.00 0.00 0.00 3.86
4294 5745 7.145932 AGTATAATGTTTTCACTTGCTCCAC 57.854 36.000 0.00 0.00 0.00 4.02
4295 5746 6.942576 AGTATAATGTTTTCACTTGCTCCACT 59.057 34.615 0.00 0.00 0.00 4.00
4296 5747 6.655078 ATAATGTTTTCACTTGCTCCACTT 57.345 33.333 0.00 0.00 0.00 3.16
4297 5748 7.759489 ATAATGTTTTCACTTGCTCCACTTA 57.241 32.000 0.00 0.00 0.00 2.24
4298 5749 6.655078 AATGTTTTCACTTGCTCCACTTAT 57.345 33.333 0.00 0.00 0.00 1.73
4299 5750 7.759489 AATGTTTTCACTTGCTCCACTTATA 57.241 32.000 0.00 0.00 0.00 0.98
4300 5751 7.759489 ATGTTTTCACTTGCTCCACTTATAA 57.241 32.000 0.00 0.00 0.00 0.98
4303 5754 8.637986 TGTTTTCACTTGCTCCACTTATAATTT 58.362 29.630 0.00 0.00 0.00 1.82
4431 5882 7.899178 TCGTTAAATCAAAAGATGCTCACTA 57.101 32.000 0.00 0.00 0.00 2.74
4473 5925 9.896263 ATTGCAAATTAAAACCATGAATTTCAC 57.104 25.926 1.71 0.00 31.93 3.18
4486 5938 9.775854 ACCATGAATTTCACAAATATGTTCAAA 57.224 25.926 0.15 0.00 37.82 2.69
4568 6035 9.598517 AAATTTCAGAAATGTTTGTCAGCTTAA 57.401 25.926 9.24 0.00 0.00 1.85
4572 6039 9.598517 TTCAGAAATGTTTGTCAGCTTAAAAAT 57.401 25.926 0.00 0.00 0.00 1.82
4642 6134 9.676195 CACAAATTGTAGTAAATGTTCATGACA 57.324 29.630 0.00 0.00 43.71 3.58
4675 6167 7.273815 GTGAAAATAAAATAAATGTTCGGCGGA 59.726 33.333 7.21 0.00 0.00 5.54
4676 6168 7.813148 TGAAAATAAAATAAATGTTCGGCGGAA 59.187 29.630 7.21 2.05 0.00 4.30
4677 6169 8.535690 AAAATAAAATAAATGTTCGGCGGAAA 57.464 26.923 7.21 0.00 33.05 3.13
4678 6170 7.514573 AATAAAATAAATGTTCGGCGGAAAC 57.485 32.000 7.21 5.71 33.05 2.78
4679 6171 4.506886 AAATAAATGTTCGGCGGAAACA 57.493 36.364 15.17 15.17 33.05 2.83
4680 6172 4.506886 AATAAATGTTCGGCGGAAACAA 57.493 36.364 16.48 3.09 33.05 2.83
4681 6173 2.415697 AAATGTTCGGCGGAAACAAG 57.584 45.000 16.48 0.00 33.05 3.16
4682 6174 0.039527 AATGTTCGGCGGAAACAAGC 60.040 50.000 16.48 0.00 33.05 4.01
4733 6364 3.806949 TGGAAACAAGCATAGGGAAGT 57.193 42.857 0.00 0.00 37.44 3.01
4734 6365 3.420893 TGGAAACAAGCATAGGGAAGTG 58.579 45.455 0.00 0.00 37.44 3.16
4735 6366 3.181434 TGGAAACAAGCATAGGGAAGTGT 60.181 43.478 0.00 0.00 37.44 3.55
4736 6367 3.826729 GGAAACAAGCATAGGGAAGTGTT 59.173 43.478 0.00 0.00 0.00 3.32
4737 6368 4.082733 GGAAACAAGCATAGGGAAGTGTTC 60.083 45.833 0.00 0.00 0.00 3.18
4738 6369 3.788227 ACAAGCATAGGGAAGTGTTCA 57.212 42.857 0.00 0.00 0.00 3.18
4739 6370 4.098914 ACAAGCATAGGGAAGTGTTCAA 57.901 40.909 0.00 0.00 0.00 2.69
4740 6371 4.469657 ACAAGCATAGGGAAGTGTTCAAA 58.530 39.130 0.00 0.00 0.00 2.69
4741 6372 4.892934 ACAAGCATAGGGAAGTGTTCAAAA 59.107 37.500 0.00 0.00 0.00 2.44
4742 6373 5.362430 ACAAGCATAGGGAAGTGTTCAAAAA 59.638 36.000 0.00 0.00 0.00 1.94
4763 6394 6.976934 AAAAGAAACAAGCATAGGGAAAGA 57.023 33.333 0.00 0.00 0.00 2.52
4764 6395 6.976934 AAAGAAACAAGCATAGGGAAAGAA 57.023 33.333 0.00 0.00 0.00 2.52
4765 6396 6.581171 AAGAAACAAGCATAGGGAAAGAAG 57.419 37.500 0.00 0.00 0.00 2.85
4766 6397 5.880901 AGAAACAAGCATAGGGAAAGAAGA 58.119 37.500 0.00 0.00 0.00 2.87
4767 6398 6.306987 AGAAACAAGCATAGGGAAAGAAGAA 58.693 36.000 0.00 0.00 0.00 2.52
4768 6399 6.432472 AGAAACAAGCATAGGGAAAGAAGAAG 59.568 38.462 0.00 0.00 0.00 2.85
4769 6400 5.505181 ACAAGCATAGGGAAAGAAGAAGA 57.495 39.130 0.00 0.00 0.00 2.87
4770 6401 5.880901 ACAAGCATAGGGAAAGAAGAAGAA 58.119 37.500 0.00 0.00 0.00 2.52
4771 6402 6.306987 ACAAGCATAGGGAAAGAAGAAGAAA 58.693 36.000 0.00 0.00 0.00 2.52
4772 6403 6.777580 ACAAGCATAGGGAAAGAAGAAGAAAA 59.222 34.615 0.00 0.00 0.00 2.29
4773 6404 6.825944 AGCATAGGGAAAGAAGAAGAAAAC 57.174 37.500 0.00 0.00 0.00 2.43
4774 6405 5.412904 AGCATAGGGAAAGAAGAAGAAAACG 59.587 40.000 0.00 0.00 0.00 3.60
4775 6406 5.411669 GCATAGGGAAAGAAGAAGAAAACGA 59.588 40.000 0.00 0.00 0.00 3.85
4776 6407 6.072673 GCATAGGGAAAGAAGAAGAAAACGAA 60.073 38.462 0.00 0.00 0.00 3.85
4777 6408 5.752892 AGGGAAAGAAGAAGAAAACGAAC 57.247 39.130 0.00 0.00 0.00 3.95
4778 6409 5.190677 AGGGAAAGAAGAAGAAAACGAACA 58.809 37.500 0.00 0.00 0.00 3.18
4779 6410 5.297029 AGGGAAAGAAGAAGAAAACGAACAG 59.703 40.000 0.00 0.00 0.00 3.16
4780 6411 5.505819 GGGAAAGAAGAAGAAAACGAACAGG 60.506 44.000 0.00 0.00 0.00 4.00
4781 6412 4.553756 AAGAAGAAGAAAACGAACAGGC 57.446 40.909 0.00 0.00 0.00 4.85
4782 6413 2.544267 AGAAGAAGAAAACGAACAGGCG 59.456 45.455 0.00 0.00 37.29 5.52
4784 6415 1.597663 AGAAGAAAACGAACAGGCGTG 59.402 47.619 4.53 4.53 44.86 5.34
4785 6416 0.661020 AAGAAAACGAACAGGCGTGG 59.339 50.000 11.67 0.00 44.86 4.94
4786 6417 0.463116 AGAAAACGAACAGGCGTGGT 60.463 50.000 11.67 3.33 44.86 4.16
4787 6418 0.041576 GAAAACGAACAGGCGTGGTC 60.042 55.000 14.46 14.46 44.86 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 4.920376 AGCGGTTTTGTGAACATATATGC 58.080 39.130 12.79 0.00 0.00 3.14
52 64 2.116125 ACCCTTGCCACTTGGAGC 59.884 61.111 0.00 0.00 37.39 4.70
53 65 0.890996 GACACCCTTGCCACTTGGAG 60.891 60.000 0.00 0.00 37.39 3.86
139 151 8.502387 GTGCATCATATCAAAAGTCCTATCTTC 58.498 37.037 0.00 0.00 0.00 2.87
164 179 7.450124 TTTTCAGACTCGTTCACTATAGAGT 57.550 36.000 6.78 0.00 45.46 3.24
165 180 6.470877 GCTTTTCAGACTCGTTCACTATAGAG 59.529 42.308 6.78 0.00 36.83 2.43
185 200 2.949644 GACTTGTACCACACCAGCTTTT 59.050 45.455 0.00 0.00 0.00 2.27
193 208 1.602377 GGCACAAGACTTGTACCACAC 59.398 52.381 26.42 10.86 44.81 3.82
216 231 2.281539 TCGATTATCTGGGGCGACTA 57.718 50.000 0.00 0.00 0.00 2.59
218 233 1.499049 GTTCGATTATCTGGGGCGAC 58.501 55.000 0.00 0.00 0.00 5.19
223 238 3.873910 AGTTGTGGTTCGATTATCTGGG 58.126 45.455 0.00 0.00 0.00 4.45
238 253 2.485426 CCCAGTGAACATGCTAGTTGTG 59.515 50.000 0.00 0.00 0.00 3.33
441 457 7.845617 TCGCACACAACAATTAATAAGTTTC 57.154 32.000 4.05 0.00 0.00 2.78
444 460 6.730175 TGTTCGCACACAACAATTAATAAGT 58.270 32.000 0.00 0.00 30.67 2.24
494 514 8.934023 TTTCTGAGTGGAGGTTGTATTTTTAT 57.066 30.769 0.00 0.00 0.00 1.40
495 515 8.754991 TTTTCTGAGTGGAGGTTGTATTTTTA 57.245 30.769 0.00 0.00 0.00 1.52
496 516 7.654022 TTTTCTGAGTGGAGGTTGTATTTTT 57.346 32.000 0.00 0.00 0.00 1.94
497 517 7.839680 ATTTTCTGAGTGGAGGTTGTATTTT 57.160 32.000 0.00 0.00 0.00 1.82
498 518 8.934023 TTATTTTCTGAGTGGAGGTTGTATTT 57.066 30.769 0.00 0.00 0.00 1.40
502 522 8.934023 TTTATTATTTTCTGAGTGGAGGTTGT 57.066 30.769 0.00 0.00 0.00 3.32
532 552 9.939424 GAATAGAGGGAGTATAGGGTTGTATAT 57.061 37.037 0.00 0.00 0.00 0.86
533 553 8.342270 GGAATAGAGGGAGTATAGGGTTGTATA 58.658 40.741 0.00 0.00 0.00 1.47
534 554 7.190501 GGAATAGAGGGAGTATAGGGTTGTAT 58.809 42.308 0.00 0.00 0.00 2.29
535 555 6.105139 TGGAATAGAGGGAGTATAGGGTTGTA 59.895 42.308 0.00 0.00 0.00 2.41
536 556 5.102783 TGGAATAGAGGGAGTATAGGGTTGT 60.103 44.000 0.00 0.00 0.00 3.32
537 557 5.403512 TGGAATAGAGGGAGTATAGGGTTG 58.596 45.833 0.00 0.00 0.00 3.77
538 558 5.698369 TGGAATAGAGGGAGTATAGGGTT 57.302 43.478 0.00 0.00 0.00 4.11
539 559 5.698369 TTGGAATAGAGGGAGTATAGGGT 57.302 43.478 0.00 0.00 0.00 4.34
540 560 7.017651 ACATTTTGGAATAGAGGGAGTATAGGG 59.982 40.741 0.00 0.00 0.00 3.53
541 561 7.978925 ACATTTTGGAATAGAGGGAGTATAGG 58.021 38.462 0.00 0.00 0.00 2.57
542 562 9.930693 GTACATTTTGGAATAGAGGGAGTATAG 57.069 37.037 0.00 0.00 0.00 1.31
543 563 9.670442 AGTACATTTTGGAATAGAGGGAGTATA 57.330 33.333 0.00 0.00 0.00 1.47
544 564 8.568617 AGTACATTTTGGAATAGAGGGAGTAT 57.431 34.615 0.00 0.00 0.00 2.12
545 565 7.070821 GGAGTACATTTTGGAATAGAGGGAGTA 59.929 40.741 0.00 0.00 0.00 2.59
546 566 6.126739 GGAGTACATTTTGGAATAGAGGGAGT 60.127 42.308 0.00 0.00 0.00 3.85
547 567 6.292150 GGAGTACATTTTGGAATAGAGGGAG 58.708 44.000 0.00 0.00 0.00 4.30
548 568 5.132144 GGGAGTACATTTTGGAATAGAGGGA 59.868 44.000 0.00 0.00 0.00 4.20
549 569 5.132816 AGGGAGTACATTTTGGAATAGAGGG 59.867 44.000 0.00 0.00 0.00 4.30
550 570 6.253946 AGGGAGTACATTTTGGAATAGAGG 57.746 41.667 0.00 0.00 0.00 3.69
551 571 6.292150 GGAGGGAGTACATTTTGGAATAGAG 58.708 44.000 0.00 0.00 0.00 2.43
552 572 5.163343 CGGAGGGAGTACATTTTGGAATAGA 60.163 44.000 0.00 0.00 0.00 1.98
553 573 5.057149 CGGAGGGAGTACATTTTGGAATAG 58.943 45.833 0.00 0.00 0.00 1.73
554 574 4.472108 ACGGAGGGAGTACATTTTGGAATA 59.528 41.667 0.00 0.00 0.00 1.75
555 575 3.265995 ACGGAGGGAGTACATTTTGGAAT 59.734 43.478 0.00 0.00 0.00 3.01
556 576 2.640826 ACGGAGGGAGTACATTTTGGAA 59.359 45.455 0.00 0.00 0.00 3.53
557 577 2.262637 ACGGAGGGAGTACATTTTGGA 58.737 47.619 0.00 0.00 0.00 3.53
558 578 2.781681 ACGGAGGGAGTACATTTTGG 57.218 50.000 0.00 0.00 0.00 3.28
559 579 4.324267 AGAAACGGAGGGAGTACATTTTG 58.676 43.478 0.00 0.00 0.00 2.44
560 580 4.635699 AGAAACGGAGGGAGTACATTTT 57.364 40.909 0.00 0.00 0.00 1.82
561 581 5.750352 TTAGAAACGGAGGGAGTACATTT 57.250 39.130 0.00 0.00 0.00 2.32
562 582 5.952347 ATTAGAAACGGAGGGAGTACATT 57.048 39.130 0.00 0.00 0.00 2.71
563 583 5.952347 AATTAGAAACGGAGGGAGTACAT 57.048 39.130 0.00 0.00 0.00 2.29
564 584 8.537728 TTATAATTAGAAACGGAGGGAGTACA 57.462 34.615 0.00 0.00 0.00 2.90
565 585 8.637099 ACTTATAATTAGAAACGGAGGGAGTAC 58.363 37.037 0.00 0.00 0.00 2.73
566 586 8.773033 ACTTATAATTAGAAACGGAGGGAGTA 57.227 34.615 0.00 0.00 0.00 2.59
567 587 7.564292 AGACTTATAATTAGAAACGGAGGGAGT 59.436 37.037 0.00 0.00 0.00 3.85
611 631 9.162764 ACTTATTTTGCGATGTATGTAGTCTTT 57.837 29.630 0.00 0.00 0.00 2.52
612 632 8.604035 CACTTATTTTGCGATGTATGTAGTCTT 58.396 33.333 0.00 0.00 0.00 3.01
614 634 8.126871 TCACTTATTTTGCGATGTATGTAGTC 57.873 34.615 0.00 0.00 0.00 2.59
696 716 7.287810 ACGCTCCCTAAATATACAATTCCTTT 58.712 34.615 0.00 0.00 0.00 3.11
699 721 6.128634 CGAACGCTCCCTAAATATACAATTCC 60.129 42.308 0.00 0.00 0.00 3.01
702 724 5.011329 TCCGAACGCTCCCTAAATATACAAT 59.989 40.000 0.00 0.00 0.00 2.71
705 727 4.510038 TCCGAACGCTCCCTAAATATAC 57.490 45.455 0.00 0.00 0.00 1.47
707 729 4.562963 GGATTCCGAACGCTCCCTAAATAT 60.563 45.833 0.00 0.00 0.00 1.28
716 738 1.227292 GGAGGGATTCCGAACGCTC 60.227 63.158 14.16 14.16 42.58 5.03
725 747 0.688087 ACTCGGGAGTGGAGGGATTC 60.688 60.000 0.00 0.00 40.75 2.52
726 748 0.688087 GACTCGGGAGTGGAGGGATT 60.688 60.000 5.98 0.00 42.66 3.01
727 749 1.075896 GACTCGGGAGTGGAGGGAT 60.076 63.158 5.98 0.00 42.66 3.85
728 750 2.359404 GACTCGGGAGTGGAGGGA 59.641 66.667 5.98 0.00 42.66 4.20
729 751 2.037367 TGACTCGGGAGTGGAGGG 59.963 66.667 5.98 0.00 42.66 4.30
765 798 1.288127 CACCTTTTCAGCCTGCAGC 59.712 57.895 8.66 3.91 44.25 5.25
766 799 0.538057 TCCACCTTTTCAGCCTGCAG 60.538 55.000 6.78 6.78 0.00 4.41
767 800 0.538057 CTCCACCTTTTCAGCCTGCA 60.538 55.000 0.00 0.00 0.00 4.41
768 801 1.871126 GCTCCACCTTTTCAGCCTGC 61.871 60.000 0.00 0.00 0.00 4.85
770 803 0.251077 CAGCTCCACCTTTTCAGCCT 60.251 55.000 0.00 0.00 31.81 4.58
771 804 1.246737 CCAGCTCCACCTTTTCAGCC 61.247 60.000 0.00 0.00 31.81 4.85
772 805 1.246737 CCCAGCTCCACCTTTTCAGC 61.247 60.000 0.00 0.00 0.00 4.26
773 806 0.401738 TCCCAGCTCCACCTTTTCAG 59.598 55.000 0.00 0.00 0.00 3.02
774 807 1.075601 ATCCCAGCTCCACCTTTTCA 58.924 50.000 0.00 0.00 0.00 2.69
775 808 3.584733 ATATCCCAGCTCCACCTTTTC 57.415 47.619 0.00 0.00 0.00 2.29
776 809 3.181454 CGTATATCCCAGCTCCACCTTTT 60.181 47.826 0.00 0.00 0.00 2.27
777 810 2.368875 CGTATATCCCAGCTCCACCTTT 59.631 50.000 0.00 0.00 0.00 3.11
778 811 1.971357 CGTATATCCCAGCTCCACCTT 59.029 52.381 0.00 0.00 0.00 3.50
779 812 1.633774 CGTATATCCCAGCTCCACCT 58.366 55.000 0.00 0.00 0.00 4.00
780 813 0.037232 GCGTATATCCCAGCTCCACC 60.037 60.000 0.00 0.00 0.00 4.61
781 814 0.388649 CGCGTATATCCCAGCTCCAC 60.389 60.000 0.00 0.00 0.00 4.02
782 815 1.964448 CGCGTATATCCCAGCTCCA 59.036 57.895 0.00 0.00 0.00 3.86
783 816 1.446272 GCGCGTATATCCCAGCTCC 60.446 63.158 8.43 0.00 0.00 4.70
784 817 0.456995 GAGCGCGTATATCCCAGCTC 60.457 60.000 8.43 0.00 43.11 4.09
785 818 1.587054 GAGCGCGTATATCCCAGCT 59.413 57.895 8.43 0.00 37.69 4.24
786 819 1.446272 GGAGCGCGTATATCCCAGC 60.446 63.158 8.43 0.00 0.00 4.85
787 820 1.154016 CGGAGCGCGTATATCCCAG 60.154 63.158 8.43 0.00 0.00 4.45
788 821 2.959372 CGGAGCGCGTATATCCCA 59.041 61.111 8.43 0.00 0.00 4.37
830 863 1.450025 GTTTCTAAGGGCCTGTTCGG 58.550 55.000 6.92 0.00 0.00 4.30
831 864 1.076332 CGTTTCTAAGGGCCTGTTCG 58.924 55.000 6.92 3.05 0.00 3.95
832 865 1.271217 ACCGTTTCTAAGGGCCTGTTC 60.271 52.381 6.92 0.00 40.03 3.18
833 866 0.769247 ACCGTTTCTAAGGGCCTGTT 59.231 50.000 6.92 0.00 40.03 3.16
834 867 0.036306 CACCGTTTCTAAGGGCCTGT 59.964 55.000 6.92 0.00 40.03 4.00
835 868 0.676782 CCACCGTTTCTAAGGGCCTG 60.677 60.000 6.92 0.00 40.03 4.85
836 869 1.683441 CCACCGTTTCTAAGGGCCT 59.317 57.895 0.00 0.00 40.03 5.19
837 870 1.378119 CCCACCGTTTCTAAGGGCC 60.378 63.158 0.00 0.00 40.03 5.80
838 871 0.392595 CTCCCACCGTTTCTAAGGGC 60.393 60.000 0.00 0.00 40.03 5.19
839 872 0.981943 ACTCCCACCGTTTCTAAGGG 59.018 55.000 0.00 0.00 42.07 3.95
840 873 2.830321 ACTACTCCCACCGTTTCTAAGG 59.170 50.000 0.00 0.00 0.00 2.69
841 874 5.848833 ATACTACTCCCACCGTTTCTAAG 57.151 43.478 0.00 0.00 0.00 2.18
842 875 6.610075 AAATACTACTCCCACCGTTTCTAA 57.390 37.500 0.00 0.00 0.00 2.10
843 876 6.438425 AGAAAATACTACTCCCACCGTTTCTA 59.562 38.462 0.00 0.00 32.55 2.10
844 877 5.247792 AGAAAATACTACTCCCACCGTTTCT 59.752 40.000 0.00 0.00 0.00 2.52
845 878 5.350640 CAGAAAATACTACTCCCACCGTTTC 59.649 44.000 0.00 0.00 0.00 2.78
849 882 4.730949 TCAGAAAATACTACTCCCACCG 57.269 45.455 0.00 0.00 0.00 4.94
850 883 6.473758 ACTTTCAGAAAATACTACTCCCACC 58.526 40.000 0.00 0.00 0.00 4.61
856 939 9.628500 AAGGTTTGACTTTCAGAAAATACTACT 57.372 29.630 0.00 0.00 0.00 2.57
857 940 9.665264 CAAGGTTTGACTTTCAGAAAATACTAC 57.335 33.333 0.00 0.00 0.00 2.73
861 944 9.364989 CAAACAAGGTTTGACTTTCAGAAAATA 57.635 29.630 14.87 0.00 0.00 1.40
884 967 2.359531 GTGGGACGTTGGTTTGATCAAA 59.640 45.455 16.91 16.91 0.00 2.69
885 968 1.950909 GTGGGACGTTGGTTTGATCAA 59.049 47.619 3.38 3.38 0.00 2.57
886 969 1.600023 GTGGGACGTTGGTTTGATCA 58.400 50.000 0.00 0.00 0.00 2.92
887 970 0.879090 GGTGGGACGTTGGTTTGATC 59.121 55.000 0.00 0.00 0.00 2.92
888 971 0.183971 TGGTGGGACGTTGGTTTGAT 59.816 50.000 0.00 0.00 0.00 2.57
889 972 0.748729 GTGGTGGGACGTTGGTTTGA 60.749 55.000 0.00 0.00 0.00 2.69
890 973 1.730451 GGTGGTGGGACGTTGGTTTG 61.730 60.000 0.00 0.00 0.00 2.93
891 974 1.454295 GGTGGTGGGACGTTGGTTT 60.454 57.895 0.00 0.00 0.00 3.27
892 975 2.193786 GGTGGTGGGACGTTGGTT 59.806 61.111 0.00 0.00 0.00 3.67
893 976 3.091190 TGGTGGTGGGACGTTGGT 61.091 61.111 0.00 0.00 0.00 3.67
894 977 2.593436 GTGGTGGTGGGACGTTGG 60.593 66.667 0.00 0.00 0.00 3.77
895 978 1.891919 CTGTGGTGGTGGGACGTTG 60.892 63.158 0.00 0.00 0.00 4.10
896 979 1.049855 TACTGTGGTGGTGGGACGTT 61.050 55.000 0.00 0.00 0.00 3.99
928 1011 3.127533 GGAGGCCGTGTGTGATGC 61.128 66.667 0.00 0.00 0.00 3.91
929 1012 1.742880 CAGGAGGCCGTGTGTGATG 60.743 63.158 0.00 0.00 0.00 3.07
930 1013 2.665000 CAGGAGGCCGTGTGTGAT 59.335 61.111 0.00 0.00 0.00 3.06
931 1014 4.314440 GCAGGAGGCCGTGTGTGA 62.314 66.667 0.00 0.00 36.11 3.58
953 1036 1.802337 CTCGTCGTGGACCACAGGAA 61.802 60.000 24.18 6.06 44.70 3.36
988 1074 3.044305 GCCGTGAGCTGTGGTGTC 61.044 66.667 0.00 0.00 38.99 3.67
1007 1095 0.746063 CATTGTGGTTGTGGCTGTGT 59.254 50.000 0.00 0.00 0.00 3.72
1008 1096 0.032403 CCATTGTGGTTGTGGCTGTG 59.968 55.000 0.00 0.00 31.35 3.66
1195 1295 8.530311 CACCATGAGCTAGAAGAAGATGTATAT 58.470 37.037 0.00 0.00 0.00 0.86
1196 1296 7.039434 CCACCATGAGCTAGAAGAAGATGTATA 60.039 40.741 0.00 0.00 0.00 1.47
1197 1297 6.239543 CCACCATGAGCTAGAAGAAGATGTAT 60.240 42.308 0.00 0.00 0.00 2.29
1198 1298 5.069648 CCACCATGAGCTAGAAGAAGATGTA 59.930 44.000 0.00 0.00 0.00 2.29
1199 1299 4.141756 CCACCATGAGCTAGAAGAAGATGT 60.142 45.833 0.00 0.00 0.00 3.06
1206 1306 0.176680 ACGCCACCATGAGCTAGAAG 59.823 55.000 0.00 0.00 0.00 2.85
1209 1309 1.522355 CCACGCCACCATGAGCTAG 60.522 63.158 0.00 0.00 0.00 3.42
1258 1373 3.534056 CGGTGGGGGCTACGGTAG 61.534 72.222 10.83 10.83 0.00 3.18
1343 1462 4.877823 TGATTGATTGGTGCTAGCAAGTAG 59.122 41.667 21.29 0.00 39.11 2.57
1344 1463 4.842574 TGATTGATTGGTGCTAGCAAGTA 58.157 39.130 21.29 7.71 39.11 2.24
1345 1464 3.689347 TGATTGATTGGTGCTAGCAAGT 58.311 40.909 21.29 0.66 39.11 3.16
1348 1467 2.424601 GCTTGATTGATTGGTGCTAGCA 59.575 45.455 14.93 14.93 0.00 3.49
1351 1470 4.098349 GGATTGCTTGATTGATTGGTGCTA 59.902 41.667 0.00 0.00 0.00 3.49
1361 1485 5.768662 AGATACTCCATGGATTGCTTGATTG 59.231 40.000 16.63 1.50 0.00 2.67
1492 1638 0.179020 CTTGTTGAGCCAGGTGGTGA 60.179 55.000 0.00 0.00 37.57 4.02
1899 2100 8.853077 TGCATGCTACTAGCTCATTAATTATT 57.147 30.769 20.33 0.00 42.97 1.40
1902 2103 7.142306 CATGCATGCTACTAGCTCATTAATT 57.858 36.000 20.33 0.00 42.97 1.40
2047 2453 7.328249 GCACAGCTATCTCATTAGTCATTACTC 59.672 40.741 0.00 0.00 37.15 2.59
2057 2463 4.141233 TGCAAGCACAGCTATCTCATTA 57.859 40.909 0.00 0.00 38.25 1.90
2058 2464 2.995283 TGCAAGCACAGCTATCTCATT 58.005 42.857 0.00 0.00 38.25 2.57
2059 2465 2.704464 TGCAAGCACAGCTATCTCAT 57.296 45.000 0.00 0.00 38.25 2.90
2060 2466 2.477845 TTGCAAGCACAGCTATCTCA 57.522 45.000 0.00 0.00 38.25 3.27
2200 2609 0.526524 GCAGTCCCTTCTCGTCGATG 60.527 60.000 0.00 0.00 0.00 3.84
2241 2660 3.242969 CCGATGCAGAATTGGAATGTGAG 60.243 47.826 0.00 0.00 42.03 3.51
2242 2661 2.684374 CCGATGCAGAATTGGAATGTGA 59.316 45.455 0.00 0.00 42.03 3.58
2243 2662 2.797087 GCCGATGCAGAATTGGAATGTG 60.797 50.000 0.00 0.00 42.03 3.21
2244 2663 1.406539 GCCGATGCAGAATTGGAATGT 59.593 47.619 0.00 0.00 42.03 2.71
2245 2664 1.598676 CGCCGATGCAGAATTGGAATG 60.599 52.381 0.00 0.00 42.03 2.67
2260 2679 1.093972 AAAACATGCATGATCGCCGA 58.906 45.000 32.75 0.00 0.00 5.54
2285 2704 8.848474 AAATATGGTATGCTATTGGTGTACTC 57.152 34.615 0.00 0.00 0.00 2.59
2291 2710 7.018149 TGGTCCTAAATATGGTATGCTATTGGT 59.982 37.037 0.00 0.00 0.00 3.67
2303 2722 5.535783 TGAACATGCATGGTCCTAAATATGG 59.464 40.000 35.62 5.85 43.80 2.74
2312 2731 2.299867 AGGTTTTGAACATGCATGGTCC 59.700 45.455 35.62 23.55 43.80 4.46
2313 2732 3.665745 AGGTTTTGAACATGCATGGTC 57.334 42.857 33.33 33.33 44.66 4.02
2315 2734 3.919804 CGTAAGGTTTTGAACATGCATGG 59.080 43.478 29.41 12.50 0.00 3.66
2358 2777 1.944430 GCCAGGCTGCGTAAGTAAGTT 60.944 52.381 9.56 0.00 41.68 2.66
2361 2780 4.609995 GCCAGGCTGCGTAAGTAA 57.390 55.556 9.56 0.00 41.68 2.24
2441 2913 2.276116 TGGACGACAGACTCCAGCC 61.276 63.158 0.00 0.00 32.49 4.85
2445 2917 1.587054 CTGGTGGACGACAGACTCC 59.413 63.158 0.00 0.00 36.86 3.85
2453 2925 2.506957 TTGCTCTGCTGGTGGACGA 61.507 57.895 0.00 0.00 0.00 4.20
2490 2993 1.298953 TAGCTGGCCAGGAAAGGAAT 58.701 50.000 33.46 3.04 0.00 3.01
2496 2999 1.765314 GAAGAGATAGCTGGCCAGGAA 59.235 52.381 33.46 7.41 0.00 3.36
2497 3000 1.062581 AGAAGAGATAGCTGGCCAGGA 60.063 52.381 33.46 0.00 0.00 3.86
2498 3001 1.422531 AGAAGAGATAGCTGGCCAGG 58.577 55.000 33.46 15.81 0.00 4.45
2499 3002 2.433604 TGAAGAAGAGATAGCTGGCCAG 59.566 50.000 29.34 29.34 0.00 4.85
2500 3003 2.470990 TGAAGAAGAGATAGCTGGCCA 58.529 47.619 4.71 4.71 0.00 5.36
2501 3004 3.556843 GGATGAAGAAGAGATAGCTGGCC 60.557 52.174 0.00 0.00 0.00 5.36
2502 3005 3.556843 GGGATGAAGAAGAGATAGCTGGC 60.557 52.174 0.00 0.00 0.00 4.85
2503 3006 3.903090 AGGGATGAAGAAGAGATAGCTGG 59.097 47.826 0.00 0.00 0.00 4.85
2504 3007 4.021192 GGAGGGATGAAGAAGAGATAGCTG 60.021 50.000 0.00 0.00 0.00 4.24
2505 3008 4.159557 GGAGGGATGAAGAAGAGATAGCT 58.840 47.826 0.00 0.00 0.00 3.32
2506 3009 3.260632 GGGAGGGATGAAGAAGAGATAGC 59.739 52.174 0.00 0.00 0.00 2.97
2507 3010 4.750941 AGGGAGGGATGAAGAAGAGATAG 58.249 47.826 0.00 0.00 0.00 2.08
2508 3011 4.746466 GAGGGAGGGATGAAGAAGAGATA 58.254 47.826 0.00 0.00 0.00 1.98
2509 3012 3.586429 GAGGGAGGGATGAAGAAGAGAT 58.414 50.000 0.00 0.00 0.00 2.75
2510 3013 2.688214 CGAGGGAGGGATGAAGAAGAGA 60.688 54.545 0.00 0.00 0.00 3.10
2511 3014 1.686052 CGAGGGAGGGATGAAGAAGAG 59.314 57.143 0.00 0.00 0.00 2.85
2512 3015 1.007238 ACGAGGGAGGGATGAAGAAGA 59.993 52.381 0.00 0.00 0.00 2.87
2513 3016 1.490574 ACGAGGGAGGGATGAAGAAG 58.509 55.000 0.00 0.00 0.00 2.85
2514 3017 2.667470 CTACGAGGGAGGGATGAAGAA 58.333 52.381 0.00 0.00 0.00 2.52
2515 3018 1.754555 GCTACGAGGGAGGGATGAAGA 60.755 57.143 0.00 0.00 0.00 2.87
2516 3019 0.676736 GCTACGAGGGAGGGATGAAG 59.323 60.000 0.00 0.00 0.00 3.02
2517 3020 0.032515 TGCTACGAGGGAGGGATGAA 60.033 55.000 0.00 0.00 0.00 2.57
2518 3021 0.755698 GTGCTACGAGGGAGGGATGA 60.756 60.000 0.00 0.00 0.00 2.92
2519 3022 1.043116 TGTGCTACGAGGGAGGGATG 61.043 60.000 0.00 0.00 0.00 3.51
2520 3023 0.757188 CTGTGCTACGAGGGAGGGAT 60.757 60.000 0.00 0.00 0.00 3.85
2521 3024 1.379977 CTGTGCTACGAGGGAGGGA 60.380 63.158 0.00 0.00 0.00 4.20
2524 3027 1.153745 GTGCTGTGCTACGAGGGAG 60.154 63.158 0.00 0.00 0.00 4.30
2525 3028 2.646175 GGTGCTGTGCTACGAGGGA 61.646 63.158 0.00 0.00 0.00 4.20
2542 3058 6.377327 TCAAAAGTTAGAACAGAAAGCAGG 57.623 37.500 0.00 0.00 0.00 4.85
2550 3066 7.413000 CCCACGATGTATCAAAAGTTAGAACAG 60.413 40.741 0.00 0.00 0.00 3.16
2581 3108 1.074775 ATGCCACACCCACACGATT 59.925 52.632 0.00 0.00 0.00 3.34
2595 3128 2.813754 TGTTGTAGAAGTTCTGCATGCC 59.186 45.455 22.15 14.17 38.83 4.40
2596 3129 4.437930 GGATGTTGTAGAAGTTCTGCATGC 60.438 45.833 22.15 17.80 38.83 4.06
2597 3130 4.940046 AGGATGTTGTAGAAGTTCTGCATG 59.060 41.667 22.15 0.00 38.83 4.06
2598 3131 5.171339 AGGATGTTGTAGAAGTTCTGCAT 57.829 39.130 22.15 15.96 38.83 3.96
2809 3363 3.706594 TCTAGGATTCATGAAGTCGGCTT 59.293 43.478 14.54 0.00 37.71 4.35
2812 3366 5.221521 TGGATTCTAGGATTCATGAAGTCGG 60.222 44.000 14.54 7.21 0.00 4.79
2843 3397 6.424683 ACGATGAATCAATCAATCAATCACG 58.575 36.000 0.00 0.00 42.54 4.35
2844 3398 8.624701 AAACGATGAATCAATCAATCAATCAC 57.375 30.769 0.00 0.00 42.54 3.06
2873 3428 7.312888 GCAATTAGCTGCAACGAAATTATAG 57.687 36.000 1.02 0.00 42.17 1.31
2924 3539 1.865865 ACGTCCAACATCACTCACAC 58.134 50.000 0.00 0.00 0.00 3.82
2936 3555 1.803334 GTCAACCTGCATACGTCCAA 58.197 50.000 0.00 0.00 0.00 3.53
3004 4098 5.451798 GGTGGATTTTTGCTACACCCATATG 60.452 44.000 0.00 0.00 44.40 1.78
3006 4100 4.020543 GGTGGATTTTTGCTACACCCATA 58.979 43.478 0.00 0.00 44.40 2.74
3011 4105 4.702131 AGAGATGGTGGATTTTTGCTACAC 59.298 41.667 0.00 0.00 0.00 2.90
3012 4106 4.922206 AGAGATGGTGGATTTTTGCTACA 58.078 39.130 0.00 0.00 0.00 2.74
3013 4107 5.189180 AGAGAGATGGTGGATTTTTGCTAC 58.811 41.667 0.00 0.00 0.00 3.58
3014 4108 5.441718 AGAGAGATGGTGGATTTTTGCTA 57.558 39.130 0.00 0.00 0.00 3.49
3015 4109 4.313020 AGAGAGATGGTGGATTTTTGCT 57.687 40.909 0.00 0.00 0.00 3.91
3016 4110 4.704057 AGAAGAGAGATGGTGGATTTTTGC 59.296 41.667 0.00 0.00 0.00 3.68
3017 4111 5.709164 ACAGAAGAGAGATGGTGGATTTTTG 59.291 40.000 0.00 0.00 0.00 2.44
3021 4115 3.454082 GGACAGAAGAGAGATGGTGGATT 59.546 47.826 0.00 0.00 0.00 3.01
3023 4117 2.461695 GGACAGAAGAGAGATGGTGGA 58.538 52.381 0.00 0.00 0.00 4.02
3029 4123 4.223556 TGTACTCGGACAGAAGAGAGAT 57.776 45.455 0.00 0.00 37.87 2.75
3038 4132 3.280295 AGGTAGTGATGTACTCGGACAG 58.720 50.000 0.00 0.00 40.89 3.51
3046 4140 5.909621 TGGTTACAGAGGTAGTGATGTAC 57.090 43.478 0.00 0.00 0.00 2.90
3054 4148 9.245962 CGTCTTATATTTTGGTTACAGAGGTAG 57.754 37.037 0.00 0.00 0.00 3.18
3055 4149 7.707893 GCGTCTTATATTTTGGTTACAGAGGTA 59.292 37.037 0.00 0.00 0.00 3.08
3057 4151 6.761714 AGCGTCTTATATTTTGGTTACAGAGG 59.238 38.462 0.00 0.00 0.00 3.69
3058 4152 7.772332 AGCGTCTTATATTTTGGTTACAGAG 57.228 36.000 0.00 0.00 0.00 3.35
3060 4154 9.061610 CAAAAGCGTCTTATATTTTGGTTACAG 57.938 33.333 0.00 0.00 38.41 2.74
3061 4155 7.539366 GCAAAAGCGTCTTATATTTTGGTTACA 59.461 33.333 10.27 0.00 41.00 2.41
3062 4156 7.539366 TGCAAAAGCGTCTTATATTTTGGTTAC 59.461 33.333 10.27 0.00 41.00 2.50
3064 4158 6.451393 TGCAAAAGCGTCTTATATTTTGGTT 58.549 32.000 10.27 0.00 41.00 3.67
3066 4160 6.092748 ACTGCAAAAGCGTCTTATATTTTGG 58.907 36.000 10.27 0.00 41.00 3.28
3068 4162 7.367285 TGAACTGCAAAAGCGTCTTATATTTT 58.633 30.769 0.00 0.00 0.00 1.82
3070 4164 6.494893 TGAACTGCAAAAGCGTCTTATATT 57.505 33.333 0.00 0.00 0.00 1.28
3071 4165 6.494893 TTGAACTGCAAAAGCGTCTTATAT 57.505 33.333 0.00 0.00 32.46 0.86
3072 4166 5.933187 TTGAACTGCAAAAGCGTCTTATA 57.067 34.783 0.00 0.00 32.46 0.98
3073 4167 4.829064 TTGAACTGCAAAAGCGTCTTAT 57.171 36.364 0.00 0.00 32.46 1.73
3075 4169 3.715628 ATTGAACTGCAAAAGCGTCTT 57.284 38.095 0.00 0.00 40.48 3.01
3076 4170 3.715628 AATTGAACTGCAAAAGCGTCT 57.284 38.095 0.00 0.00 40.48 4.18
3078 4172 3.779759 TCAAATTGAACTGCAAAAGCGT 58.220 36.364 0.00 0.00 40.48 5.07
3079 4173 4.775440 TTCAAATTGAACTGCAAAAGCG 57.225 36.364 4.03 0.00 40.48 4.68
3148 4500 2.344950 AGATCGAGCTGCAAGAACAAG 58.655 47.619 0.39 0.00 34.07 3.16
3203 4555 1.996191 CGGCACTTACTTGAGCTTCTC 59.004 52.381 0.00 0.00 0.00 2.87
3222 4574 2.591429 TGCACCAGGTGAGTTGCG 60.591 61.111 24.96 0.00 35.23 4.85
3260 4614 2.345876 TCAACACACACACACAGACAG 58.654 47.619 0.00 0.00 0.00 3.51
3264 4618 3.058293 ACTTGTTCAACACACACACACAG 60.058 43.478 0.00 0.00 33.98 3.66
3268 4622 3.822594 TCACTTGTTCAACACACACAC 57.177 42.857 0.00 0.00 33.98 3.82
3269 4623 5.384063 AATTCACTTGTTCAACACACACA 57.616 34.783 0.00 0.00 33.98 3.72
3271 4625 7.540400 CAGTTAAATTCACTTGTTCAACACACA 59.460 33.333 0.00 0.00 33.98 3.72
3273 4627 7.598278 ACAGTTAAATTCACTTGTTCAACACA 58.402 30.769 0.00 0.00 0.00 3.72
3274 4628 8.372521 CAACAGTTAAATTCACTTGTTCAACAC 58.627 33.333 0.00 0.00 0.00 3.32
3277 4631 9.299963 CATCAACAGTTAAATTCACTTGTTCAA 57.700 29.630 0.00 0.00 0.00 2.69
3279 4633 8.856490 ACATCAACAGTTAAATTCACTTGTTC 57.144 30.769 0.00 0.00 0.00 3.18
3282 4670 9.897744 ACATACATCAACAGTTAAATTCACTTG 57.102 29.630 0.00 0.00 0.00 3.16
3292 4680 9.150348 CAACAGATACACATACATCAACAGTTA 57.850 33.333 0.00 0.00 0.00 2.24
3304 4692 4.081142 CCCACCTGACAACAGATACACATA 60.081 45.833 0.00 0.00 46.03 2.29
3313 4701 0.890996 GCCTTCCCACCTGACAACAG 60.891 60.000 0.00 0.00 43.12 3.16
3471 4877 7.660112 TGAATGATTAAGTGCAAGTTTGTGAT 58.340 30.769 0.00 0.00 0.00 3.06
3472 4878 7.036996 TGAATGATTAAGTGCAAGTTTGTGA 57.963 32.000 0.00 0.00 0.00 3.58
3473 4879 7.595875 TGATGAATGATTAAGTGCAAGTTTGTG 59.404 33.333 0.00 0.00 0.00 3.33
3474 4880 7.660112 TGATGAATGATTAAGTGCAAGTTTGT 58.340 30.769 0.00 0.00 0.00 2.83
3475 4881 8.523523 TTGATGAATGATTAAGTGCAAGTTTG 57.476 30.769 0.00 0.00 0.00 2.93
3538 4946 7.505248 TGGAAATTCAACTGGCAGCATATATAA 59.495 33.333 15.89 0.02 0.00 0.98
3552 4960 2.564062 CAGCCACCATGGAAATTCAACT 59.436 45.455 21.47 0.89 40.96 3.16
3560 4968 5.010922 GCATTATATTTCAGCCACCATGGAA 59.989 40.000 21.47 0.00 40.96 3.53
3578 4986 2.158385 AGAGGAGAGGGTCGAGCATTAT 60.158 50.000 17.59 2.03 0.00 1.28
3610 5022 1.002134 AGGGCAAGGGTTGTCGATG 60.002 57.895 0.00 0.00 35.72 3.84
3658 5070 1.544691 TGTTTCTACCGAGCAGGAGAC 59.455 52.381 5.19 0.00 45.00 3.36
3677 5089 6.309980 TCGTCTTCTTCTACTACTACGTCTTG 59.690 42.308 0.00 0.00 0.00 3.02
3682 5094 4.795795 TCGTCGTCTTCTTCTACTACTACG 59.204 45.833 0.00 0.00 0.00 3.51
3687 5099 3.610242 GTCGTCGTCGTCTTCTTCTACTA 59.390 47.826 1.33 0.00 38.33 1.82
3690 5102 2.156504 GTGTCGTCGTCGTCTTCTTCTA 59.843 50.000 1.33 0.00 38.33 2.10
3692 5104 1.316414 GTGTCGTCGTCGTCTTCTTC 58.684 55.000 1.33 0.00 38.33 2.87
3693 5105 0.659427 TGTGTCGTCGTCGTCTTCTT 59.341 50.000 1.33 0.00 38.33 2.52
3694 5106 0.041488 GTGTGTCGTCGTCGTCTTCT 60.041 55.000 1.33 0.00 38.33 2.85
3695 5107 0.995731 GGTGTGTCGTCGTCGTCTTC 60.996 60.000 1.33 0.00 38.33 2.87
3696 5108 1.009222 GGTGTGTCGTCGTCGTCTT 60.009 57.895 1.33 0.00 38.33 3.01
3697 5109 2.182181 TGGTGTGTCGTCGTCGTCT 61.182 57.895 1.33 0.00 38.33 4.18
3698 5110 2.007641 GTGGTGTGTCGTCGTCGTC 61.008 63.158 1.33 0.00 38.33 4.20
3699 5111 2.025156 GTGGTGTGTCGTCGTCGT 59.975 61.111 1.33 0.00 38.33 4.34
3700 5112 2.728383 GGTGGTGTGTCGTCGTCG 60.728 66.667 0.00 0.00 38.55 5.12
3701 5113 2.355481 GGGTGGTGTGTCGTCGTC 60.355 66.667 0.00 0.00 0.00 4.20
3702 5114 3.146726 CTGGGTGGTGTGTCGTCGT 62.147 63.158 0.00 0.00 0.00 4.34
3703 5115 2.355837 CTGGGTGGTGTGTCGTCG 60.356 66.667 0.00 0.00 0.00 5.12
3807 5253 0.534203 ACAGCACCGGTACTGTTTGG 60.534 55.000 30.91 10.78 44.59 3.28
3947 5393 4.914312 AATGAAACAATCAAGCGCAATG 57.086 36.364 11.47 8.75 42.54 2.82
3954 5400 9.410556 AGATAAAACCGAAATGAAACAATCAAG 57.589 29.630 0.00 0.00 42.54 3.02
3956 5402 7.328249 GCAGATAAAACCGAAATGAAACAATCA 59.672 33.333 0.00 0.00 43.67 2.57
4021 5470 4.095782 GCACCCAACACAATATATGAACGT 59.904 41.667 0.00 0.00 0.00 3.99
4022 5471 4.335315 AGCACCCAACACAATATATGAACG 59.665 41.667 0.00 0.00 0.00 3.95
4027 5477 6.240894 CCTATCAGCACCCAACACAATATAT 58.759 40.000 0.00 0.00 0.00 0.86
4033 5484 0.327924 CCCTATCAGCACCCAACACA 59.672 55.000 0.00 0.00 0.00 3.72
4034 5485 0.618458 TCCCTATCAGCACCCAACAC 59.382 55.000 0.00 0.00 0.00 3.32
4051 5502 3.000727 CCACTCAGAACAAATACCGTCC 58.999 50.000 0.00 0.00 0.00 4.79
4070 5521 1.286553 ACCAAACAAACCCACTCTCCA 59.713 47.619 0.00 0.00 0.00 3.86
4107 5558 3.061322 CACCGACTCCGAAATGTGTAAA 58.939 45.455 0.00 0.00 38.22 2.01
4113 5564 1.350193 CTGACACCGACTCCGAAATG 58.650 55.000 0.00 0.00 38.22 2.32
4118 5569 3.633094 CTGGCTGACACCGACTCCG 62.633 68.421 0.00 0.00 0.00 4.63
4133 5584 1.915614 GCTCGCACAATGACCACTGG 61.916 60.000 0.00 0.00 0.00 4.00
4148 5599 4.522971 GAGCTTACAAGGGGCTCG 57.477 61.111 0.00 0.00 42.03 5.03
4154 5605 6.016192 TCAGTATCGAATAGGAGCTTACAAGG 60.016 42.308 0.00 0.00 0.00 3.61
4159 5610 7.584122 AGTTTCAGTATCGAATAGGAGCTTA 57.416 36.000 0.00 0.00 0.00 3.09
4174 5625 8.974060 ATAACAGGAGTTTCAAAGTTTCAGTA 57.026 30.769 0.00 0.00 39.15 2.74
4176 5627 9.665264 GTTATAACAGGAGTTTCAAAGTTTCAG 57.335 33.333 10.81 0.00 39.15 3.02
4183 5634 9.567776 TCTGAATGTTATAACAGGAGTTTCAAA 57.432 29.630 22.48 13.47 43.04 2.69
4190 5641 7.171167 CAGCTCATCTGAATGTTATAACAGGAG 59.829 40.741 22.03 16.43 45.72 3.69
4195 5646 5.049129 GGGCAGCTCATCTGAATGTTATAAC 60.049 44.000 8.75 8.75 45.72 1.89
4196 5647 5.065914 GGGCAGCTCATCTGAATGTTATAA 58.934 41.667 0.00 0.00 45.72 0.98
4208 5659 0.749454 ATTTCGTGGGGCAGCTCATC 60.749 55.000 0.00 0.00 0.00 2.92
4223 5674 2.609916 GAGTTGAGCTAGCGGGAATTTC 59.390 50.000 9.55 0.00 0.00 2.17
4234 5685 1.000486 AGGGAGCCGAGTTGAGCTA 60.000 57.895 0.00 0.00 40.11 3.32
4256 5707 6.555812 ACATTATACTAATCGAGCGAGTGA 57.444 37.500 2.87 0.00 0.00 3.41
4267 5718 9.461312 TGGAGCAAGTGAAAACATTATACTAAT 57.539 29.630 0.00 0.00 0.00 1.73
4278 5729 9.476202 AAAATTATAAGTGGAGCAAGTGAAAAC 57.524 29.630 0.00 0.00 0.00 2.43
4303 5754 5.065914 AGATAACAGCAGAGCAAGTGAAAA 58.934 37.500 0.00 0.00 0.00 2.29
4316 5767 7.613801 TCCTTGGCTTTTTATAAGATAACAGCA 59.386 33.333 9.94 0.00 0.00 4.41
4317 5768 7.996385 TCCTTGGCTTTTTATAAGATAACAGC 58.004 34.615 0.00 0.00 0.00 4.40
4321 5772 9.747898 TCACTTCCTTGGCTTTTTATAAGATAA 57.252 29.630 0.00 0.00 0.00 1.75
4446 5897 9.894783 TGAAATTCATGGTTTTAATTTGCAATG 57.105 25.926 0.00 0.00 33.99 2.82
4497 5950 9.973450 TGTGAATATTTTTCGAAATCCAAGAAA 57.027 25.926 12.12 1.24 32.76 2.52
4498 5951 9.973450 TTGTGAATATTTTTCGAAATCCAAGAA 57.027 25.926 12.12 2.01 0.00 2.52
4542 5997 9.598517 TTAAGCTGACAAACATTTCTGAAATTT 57.401 25.926 12.74 4.47 0.00 1.82
4545 6000 8.994429 TTTTAAGCTGACAAACATTTCTGAAA 57.006 26.923 5.15 5.15 0.00 2.69
4675 6167 3.792716 GCAGCGGTTATGCTTGTTT 57.207 47.368 0.00 0.00 44.46 2.83
4681 6173 1.153369 TCTCCAGCAGCGGTTATGC 60.153 57.895 3.62 0.00 44.18 3.14
4682 6174 0.811616 GGTCTCCAGCAGCGGTTATG 60.812 60.000 3.62 0.00 0.00 1.90
4714 6345 3.421844 ACACTTCCCTATGCTTGTTTCC 58.578 45.455 0.00 0.00 0.00 3.13
4739 6370 7.360113 TCTTTCCCTATGCTTGTTTCTTTTT 57.640 32.000 0.00 0.00 0.00 1.94
4740 6371 6.976934 TCTTTCCCTATGCTTGTTTCTTTT 57.023 33.333 0.00 0.00 0.00 2.27
4741 6372 6.777580 TCTTCTTTCCCTATGCTTGTTTCTTT 59.222 34.615 0.00 0.00 0.00 2.52
4742 6373 6.306987 TCTTCTTTCCCTATGCTTGTTTCTT 58.693 36.000 0.00 0.00 0.00 2.52
4743 6374 5.880901 TCTTCTTTCCCTATGCTTGTTTCT 58.119 37.500 0.00 0.00 0.00 2.52
4744 6375 6.431234 TCTTCTTCTTTCCCTATGCTTGTTTC 59.569 38.462 0.00 0.00 0.00 2.78
4745 6376 6.306987 TCTTCTTCTTTCCCTATGCTTGTTT 58.693 36.000 0.00 0.00 0.00 2.83
4746 6377 5.880901 TCTTCTTCTTTCCCTATGCTTGTT 58.119 37.500 0.00 0.00 0.00 2.83
4747 6378 5.505181 TCTTCTTCTTTCCCTATGCTTGT 57.495 39.130 0.00 0.00 0.00 3.16
4748 6379 6.824305 TTTCTTCTTCTTTCCCTATGCTTG 57.176 37.500 0.00 0.00 0.00 4.01
4749 6380 6.072452 CGTTTTCTTCTTCTTTCCCTATGCTT 60.072 38.462 0.00 0.00 0.00 3.91
4750 6381 5.412904 CGTTTTCTTCTTCTTTCCCTATGCT 59.587 40.000 0.00 0.00 0.00 3.79
4751 6382 5.411669 TCGTTTTCTTCTTCTTTCCCTATGC 59.588 40.000 0.00 0.00 0.00 3.14
4752 6383 7.041372 TGTTCGTTTTCTTCTTCTTTCCCTATG 60.041 37.037 0.00 0.00 0.00 2.23
4753 6384 6.996282 TGTTCGTTTTCTTCTTCTTTCCCTAT 59.004 34.615 0.00 0.00 0.00 2.57
4754 6385 6.350906 TGTTCGTTTTCTTCTTCTTTCCCTA 58.649 36.000 0.00 0.00 0.00 3.53
4755 6386 5.190677 TGTTCGTTTTCTTCTTCTTTCCCT 58.809 37.500 0.00 0.00 0.00 4.20
4756 6387 5.494632 TGTTCGTTTTCTTCTTCTTTCCC 57.505 39.130 0.00 0.00 0.00 3.97
4757 6388 5.511571 CCTGTTCGTTTTCTTCTTCTTTCC 58.488 41.667 0.00 0.00 0.00 3.13
4758 6389 4.970611 GCCTGTTCGTTTTCTTCTTCTTTC 59.029 41.667 0.00 0.00 0.00 2.62
4759 6390 4.495844 CGCCTGTTCGTTTTCTTCTTCTTT 60.496 41.667 0.00 0.00 0.00 2.52
4760 6391 3.002348 CGCCTGTTCGTTTTCTTCTTCTT 59.998 43.478 0.00 0.00 0.00 2.52
4761 6392 2.544267 CGCCTGTTCGTTTTCTTCTTCT 59.456 45.455 0.00 0.00 0.00 2.85
4762 6393 2.287103 ACGCCTGTTCGTTTTCTTCTTC 59.713 45.455 0.00 0.00 40.07 2.87
4763 6394 2.031683 CACGCCTGTTCGTTTTCTTCTT 59.968 45.455 0.00 0.00 41.21 2.52
4764 6395 1.597663 CACGCCTGTTCGTTTTCTTCT 59.402 47.619 0.00 0.00 41.21 2.85
4765 6396 1.333791 CCACGCCTGTTCGTTTTCTTC 60.334 52.381 0.00 0.00 41.21 2.87
4766 6397 0.661020 CCACGCCTGTTCGTTTTCTT 59.339 50.000 0.00 0.00 41.21 2.52
4767 6398 0.463116 ACCACGCCTGTTCGTTTTCT 60.463 50.000 0.00 0.00 41.21 2.52
4768 6399 0.041576 GACCACGCCTGTTCGTTTTC 60.042 55.000 0.00 0.00 41.21 2.29
4769 6400 1.768112 CGACCACGCCTGTTCGTTTT 61.768 55.000 0.00 0.00 41.21 2.43
4770 6401 2.241880 CGACCACGCCTGTTCGTTT 61.242 57.895 0.00 0.00 41.21 3.60
4771 6402 2.660552 CGACCACGCCTGTTCGTT 60.661 61.111 0.00 0.00 41.21 3.85
4772 6403 4.657824 CCGACCACGCCTGTTCGT 62.658 66.667 2.41 0.00 44.35 3.85
4774 6405 4.980805 TGCCGACCACGCCTGTTC 62.981 66.667 0.00 0.00 38.29 3.18
4775 6406 4.988598 CTGCCGACCACGCCTGTT 62.989 66.667 0.00 0.00 38.29 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.