Multiple sequence alignment - TraesCS7B01G384100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G384100 chr7B 100.000 3091 0 0 1 3091 649990539 649993629 0.000000e+00 5709
1 TraesCS7B01G384100 chr7B 93.277 357 20 4 2738 3091 638116973 638116618 9.820000e-145 523
2 TraesCS7B01G384100 chr7B 92.717 357 22 4 2738 3091 638127655 638127300 2.130000e-141 512
3 TraesCS7B01G384100 chr7B 92.416 356 21 6 2738 3091 583148744 583148393 1.280000e-138 503
4 TraesCS7B01G384100 chr7D 89.964 1963 98 33 11 1881 582161975 582163930 0.000000e+00 2442
5 TraesCS7B01G384100 chr7D 82.741 197 31 3 1938 2133 582164016 582164210 4.100000e-39 172
6 TraesCS7B01G384100 chr7A 90.410 1001 50 13 196 1165 674089811 674090796 0.000000e+00 1275
7 TraesCS7B01G384100 chr7A 85.342 1037 104 26 1237 2236 674090825 674091850 0.000000e+00 1029
8 TraesCS7B01G384100 chr7A 90.909 121 8 2 1 118 674089409 674089529 3.190000e-35 159
9 TraesCS7B01G384100 chr7A 100.000 57 0 0 138 194 674089525 674089581 4.220000e-19 106
10 TraesCS7B01G384100 chr3B 93.521 355 21 2 2738 3091 654336353 654336000 7.590000e-146 527
11 TraesCS7B01G384100 chr3B 92.011 363 25 3 2732 3091 650917795 650918156 9.890000e-140 507
12 TraesCS7B01G384100 chr5B 93.258 356 21 2 2738 3091 454422297 454422651 3.530000e-144 521
13 TraesCS7B01G384100 chr5B 92.562 363 21 4 2734 3091 696758329 696758690 1.640000e-142 516
14 TraesCS7B01G384100 chr1B 92.676 355 22 4 2738 3090 458123329 458122977 2.750000e-140 508
15 TraesCS7B01G384100 chr1D 92.157 357 25 2 2738 3091 156288968 156288612 4.600000e-138 501


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G384100 chr7B 649990539 649993629 3090 False 5709.00 5709 100.00000 1 3091 1 chr7B.!!$F1 3090
1 TraesCS7B01G384100 chr7D 582161975 582164210 2235 False 1307.00 2442 86.35250 11 2133 2 chr7D.!!$F1 2122
2 TraesCS7B01G384100 chr7A 674089409 674091850 2441 False 642.25 1275 91.66525 1 2236 4 chr7A.!!$F1 2235

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
494 766 0.037139 GAAGCAAACATGCATGGCCA 60.037 50.0 29.41 8.56 37.25 5.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2220 2652 0.955428 CCACGACATTCCAGGGTGTG 60.955 60.0 3.4 0.0 0.0 3.82 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 3.042887 ACTTGCGCAATTTCGAAAACTC 58.957 40.909 25.26 5.70 0.00 3.01
62 66 5.177142 CACAAGATGATGCAGAGCAGTATAC 59.823 44.000 0.00 0.00 43.65 1.47
68 72 1.056103 GCAGAGCAGTATACATCGCG 58.944 55.000 0.00 0.00 0.00 5.87
113 117 8.007716 CAGTCAAGCTCTTTTGCAAAAATAATG 58.992 33.333 23.92 17.95 34.99 1.90
114 118 7.712205 AGTCAAGCTCTTTTGCAAAAATAATGT 59.288 29.630 23.92 6.90 34.99 2.71
115 119 8.977505 GTCAAGCTCTTTTGCAAAAATAATGTA 58.022 29.630 23.92 6.96 34.99 2.29
116 120 8.977505 TCAAGCTCTTTTGCAAAAATAATGTAC 58.022 29.630 23.92 9.58 34.99 2.90
117 121 8.981647 CAAGCTCTTTTGCAAAAATAATGTACT 58.018 29.630 23.92 11.31 34.99 2.73
128 132 9.665264 GCAAAAATAATGTACTATTACTCCTGC 57.335 33.333 0.00 2.64 0.00 4.85
136 140 8.668510 ATGTACTATTACTCCTGCTGATTTTG 57.331 34.615 0.00 0.00 0.00 2.44
226 486 1.591594 CGTGGTGTTGTCAGCTCGT 60.592 57.895 11.68 0.00 46.54 4.18
237 497 2.135139 GTCAGCTCGTTGTGATTGACA 58.865 47.619 0.00 0.00 39.26 3.58
238 498 2.543848 GTCAGCTCGTTGTGATTGACAA 59.456 45.455 0.00 0.00 42.55 3.18
494 766 0.037139 GAAGCAAACATGCATGGCCA 60.037 50.000 29.41 8.56 37.25 5.36
584 856 5.337491 CCGGGGTCAAAGAAAATGAATCAAT 60.337 40.000 0.00 0.00 0.00 2.57
724 1045 4.347876 TCTGGATTCAGGAAGTCAAGACAA 59.652 41.667 0.00 0.00 41.23 3.18
788 1109 4.569719 TGGGAAGGCTCTTAGGTTTAAG 57.430 45.455 0.00 0.00 38.09 1.85
826 1147 7.231317 TCCATGCAACTTTATGAAAAGAGACTT 59.769 33.333 4.95 0.00 44.14 3.01
827 1148 7.327761 CCATGCAACTTTATGAAAAGAGACTTG 59.672 37.037 4.95 1.02 44.14 3.16
828 1149 6.208644 TGCAACTTTATGAAAAGAGACTTGC 58.791 36.000 12.98 12.98 44.14 4.01
829 1150 6.039717 TGCAACTTTATGAAAAGAGACTTGCT 59.960 34.615 17.37 0.00 43.92 3.91
830 1151 6.361748 GCAACTTTATGAAAAGAGACTTGCTG 59.638 38.462 12.76 0.00 44.14 4.41
831 1152 6.566197 ACTTTATGAAAAGAGACTTGCTGG 57.434 37.500 4.95 0.00 44.14 4.85
832 1153 5.048434 ACTTTATGAAAAGAGACTTGCTGGC 60.048 40.000 4.95 0.00 44.14 4.85
833 1154 2.645838 TGAAAAGAGACTTGCTGGCT 57.354 45.000 0.00 0.00 36.16 4.75
834 1155 2.224606 TGAAAAGAGACTTGCTGGCTG 58.775 47.619 0.00 0.00 31.30 4.85
835 1156 1.538950 GAAAAGAGACTTGCTGGCTGG 59.461 52.381 0.00 0.00 31.30 4.85
836 1157 0.892814 AAAGAGACTTGCTGGCTGGC 60.893 55.000 0.00 0.00 31.30 4.85
837 1158 1.776975 AAGAGACTTGCTGGCTGGCT 61.777 55.000 2.00 0.00 31.30 4.75
866 1203 2.726821 TCCATCTGGTGAATTCTTGCC 58.273 47.619 7.05 7.11 36.34 4.52
931 1268 5.303845 ACGTACTCCCCATATTCCTTTCTAC 59.696 44.000 0.00 0.00 0.00 2.59
933 1270 3.646637 ACTCCCCATATTCCTTTCTACCG 59.353 47.826 0.00 0.00 0.00 4.02
1100 1437 1.737838 CATCCCTGCGCTAAAAGACA 58.262 50.000 9.73 0.00 0.00 3.41
1102 1439 2.024176 TCCCTGCGCTAAAAGACATC 57.976 50.000 9.73 0.00 0.00 3.06
1117 1454 0.666274 ACATCCACTACACGTGCACG 60.666 55.000 35.99 35.99 42.42 5.34
1189 1532 2.613133 CCTGGTTGTTTTTGCATTGGTG 59.387 45.455 0.00 0.00 0.00 4.17
1208 1571 6.048732 TGGTGCATGTATATATCCATCGTT 57.951 37.500 0.00 0.00 0.00 3.85
1240 1610 5.701290 TGATTTTTGTTTGCATGCATCATGA 59.299 32.000 23.37 12.25 43.81 3.07
1260 1630 1.033746 ATGTGAAGCAGATTGGGCGG 61.034 55.000 0.00 0.00 36.08 6.13
1342 1712 0.818296 CAAGACGTGGTAGGAGGAGG 59.182 60.000 0.00 0.00 0.00 4.30
1703 2073 4.452733 GGCGAGCCGTGCTACCTT 62.453 66.667 0.00 0.00 39.88 3.50
1707 2077 2.678934 AGCCGTGCTACCTTCCGA 60.679 61.111 0.00 0.00 36.99 4.55
1712 2082 0.038526 CGTGCTACCTTCCGAACACT 60.039 55.000 0.00 0.00 0.00 3.55
1724 2094 1.790387 GAACACTCTGATGGCGCAC 59.210 57.895 10.83 0.00 0.00 5.34
1757 2127 0.320374 TTAACAGCTACTGGCAGCGT 59.680 50.000 15.89 0.00 46.52 5.07
1853 2224 4.090057 GCGACGTTGCTTCAGGCC 62.090 66.667 20.81 0.00 40.92 5.19
1874 2245 1.233285 CCAAGGCCTGCGAGCATATC 61.233 60.000 5.69 0.00 0.00 1.63
1875 2246 0.533531 CAAGGCCTGCGAGCATATCA 60.534 55.000 5.69 0.00 0.00 2.15
1877 2248 2.323580 GGCCTGCGAGCATATCAGC 61.324 63.158 0.00 0.00 0.00 4.26
1878 2249 2.323580 GCCTGCGAGCATATCAGCC 61.324 63.158 0.00 0.00 34.23 4.85
1894 2271 4.351874 TCAGCCCATAATACTTACTGGC 57.648 45.455 0.00 0.00 36.11 4.85
1904 2281 1.569653 ACTTACTGGCCCAGGACTAC 58.430 55.000 16.70 0.00 35.51 2.73
1909 2286 2.119495 ACTGGCCCAGGACTACTTATG 58.881 52.381 16.70 0.00 35.51 1.90
1912 2289 3.392616 CTGGCCCAGGACTACTTATGAAT 59.607 47.826 1.63 0.00 0.00 2.57
1921 2323 9.838339 CCAGGACTACTTATGAATCTTAAATGT 57.162 33.333 0.00 0.00 0.00 2.71
1933 2361 8.698973 TGAATCTTAAATGTAAGGGTTCACAA 57.301 30.769 14.98 1.20 37.39 3.33
1945 2373 1.901833 GGTTCACAATCTGGCCCATTT 59.098 47.619 0.00 0.00 0.00 2.32
1954 2382 5.835280 ACAATCTGGCCCATTTAAATAGGAG 59.165 40.000 15.87 6.04 0.00 3.69
1957 2386 4.104738 TCTGGCCCATTTAAATAGGAGGAG 59.895 45.833 15.87 7.89 0.00 3.69
1960 2389 3.397955 GCCCATTTAAATAGGAGGAGGGA 59.602 47.826 15.87 0.00 35.81 4.20
1967 2396 9.167311 CATTTAAATAGGAGGAGGGAATTATCG 57.833 37.037 0.00 0.00 0.00 2.92
1972 2401 2.973406 GGAGGAGGGAATTATCGGTCTT 59.027 50.000 0.00 0.00 0.00 3.01
1979 2408 3.541632 GGAATTATCGGTCTTGCCTTCA 58.458 45.455 0.00 0.00 34.25 3.02
1985 2414 7.639113 ATTATCGGTCTTGCCTTCAAATTTA 57.361 32.000 0.00 0.00 34.25 1.40
2012 2441 4.661402 CGTGCTTTCGAAATTTTGACATGC 60.661 41.667 11.70 12.05 0.00 4.06
2021 2450 7.508965 TCGAAATTTTGACATGCTTTTATTGC 58.491 30.769 3.86 0.00 0.00 3.56
2096 2528 3.615496 GGTACGTGTACATGTGATTGGAC 59.385 47.826 27.33 16.99 37.78 4.02
2108 2540 2.034048 GATTGGACCGGAGCTCCTCC 62.034 65.000 29.73 28.22 46.44 4.30
2117 2549 1.140804 GAGCTCCTCCGAGAAGTGC 59.859 63.158 0.87 0.00 38.52 4.40
2133 2565 6.600882 AGAAGTGCAAATGATTTCCAAGAT 57.399 33.333 0.00 0.00 0.00 2.40
2134 2566 7.001099 AGAAGTGCAAATGATTTCCAAGATT 57.999 32.000 0.00 0.00 0.00 2.40
2135 2567 8.125978 AGAAGTGCAAATGATTTCCAAGATTA 57.874 30.769 0.00 0.00 0.00 1.75
2136 2568 8.031277 AGAAGTGCAAATGATTTCCAAGATTAC 58.969 33.333 0.00 0.00 0.00 1.89
2137 2569 7.472334 AGTGCAAATGATTTCCAAGATTACT 57.528 32.000 0.00 0.00 0.00 2.24
2144 2576 6.012658 TGATTTCCAAGATTACTGTGCAAC 57.987 37.500 0.00 0.00 37.35 4.17
2165 2597 8.031864 TGCAACAAAATTAATCGATAACCACAT 58.968 29.630 0.00 0.00 0.00 3.21
2168 2600 8.909708 ACAAAATTAATCGATAACCACATGTG 57.090 30.769 19.31 19.31 0.00 3.21
2174 2606 3.000041 TCGATAACCACATGTGTTCTGC 59.000 45.455 23.79 9.63 0.00 4.26
2178 2610 2.275134 ACCACATGTGTTCTGCATGA 57.725 45.000 23.79 0.00 44.60 3.07
2182 2614 3.690628 CCACATGTGTTCTGCATGATGTA 59.309 43.478 23.79 0.00 44.60 2.29
2189 2621 5.648960 TGTGTTCTGCATGATGTATTGATGT 59.351 36.000 0.00 0.00 0.00 3.06
2194 2626 9.177304 GTTCTGCATGATGTATTGATGTAAATG 57.823 33.333 0.00 0.00 0.00 2.32
2202 2634 8.786937 GATGTATTGATGTAAATGCATCGTTT 57.213 30.769 0.00 0.00 44.31 3.60
2212 2644 8.925788 TGTAAATGCATCGTTTTTATTTTTGC 57.074 26.923 0.00 0.00 0.00 3.68
2213 2645 8.551205 TGTAAATGCATCGTTTTTATTTTTGCA 58.449 25.926 0.00 0.00 42.15 4.08
2236 2668 0.888736 TTGCACACCCTGGAATGTCG 60.889 55.000 0.00 0.00 0.00 4.35
2237 2669 1.302511 GCACACCCTGGAATGTCGT 60.303 57.895 0.00 0.00 0.00 4.34
2238 2670 1.577328 GCACACCCTGGAATGTCGTG 61.577 60.000 0.00 0.00 0.00 4.35
2239 2671 0.955428 CACACCCTGGAATGTCGTGG 60.955 60.000 0.00 0.00 0.00 4.94
2240 2672 1.374947 CACCCTGGAATGTCGTGGT 59.625 57.895 0.00 0.00 0.00 4.16
2241 2673 0.250727 CACCCTGGAATGTCGTGGTT 60.251 55.000 0.00 0.00 0.00 3.67
2242 2674 1.002659 CACCCTGGAATGTCGTGGTTA 59.997 52.381 0.00 0.00 0.00 2.85
2243 2675 1.002773 ACCCTGGAATGTCGTGGTTAC 59.997 52.381 0.00 0.00 0.00 2.50
2244 2676 1.002659 CCCTGGAATGTCGTGGTTACA 59.997 52.381 0.00 0.00 0.00 2.41
2245 2677 2.355716 CCCTGGAATGTCGTGGTTACAT 60.356 50.000 0.00 0.00 39.22 2.29
2246 2678 2.677836 CCTGGAATGTCGTGGTTACATG 59.322 50.000 0.00 0.00 37.62 3.21
2247 2679 3.595173 CTGGAATGTCGTGGTTACATGA 58.405 45.455 0.00 0.00 40.22 3.07
2248 2680 4.000325 CTGGAATGTCGTGGTTACATGAA 59.000 43.478 0.00 0.00 43.81 2.57
2249 2681 3.749088 TGGAATGTCGTGGTTACATGAAC 59.251 43.478 0.00 0.00 43.81 3.18
2250 2682 3.749088 GGAATGTCGTGGTTACATGAACA 59.251 43.478 0.00 0.00 43.81 3.18
2251 2683 4.394920 GGAATGTCGTGGTTACATGAACAT 59.605 41.667 0.00 0.00 43.81 2.71
2252 2684 5.106317 GGAATGTCGTGGTTACATGAACATT 60.106 40.000 0.00 12.84 43.81 2.71
2253 2685 5.957842 ATGTCGTGGTTACATGAACATTT 57.042 34.783 0.00 0.00 43.81 2.32
2254 2686 5.351233 TGTCGTGGTTACATGAACATTTC 57.649 39.130 0.00 0.00 43.81 2.17
2255 2687 4.816925 TGTCGTGGTTACATGAACATTTCA 59.183 37.500 0.00 0.00 43.81 2.69
2256 2688 5.297029 TGTCGTGGTTACATGAACATTTCAA 59.703 36.000 0.00 0.00 43.81 2.69
2257 2689 5.623673 GTCGTGGTTACATGAACATTTCAAC 59.376 40.000 0.00 0.00 43.81 3.18
2258 2690 5.529430 TCGTGGTTACATGAACATTTCAACT 59.471 36.000 0.00 0.00 43.95 3.16
2259 2691 6.038825 TCGTGGTTACATGAACATTTCAACTT 59.961 34.615 0.00 0.00 43.95 2.66
2260 2692 6.695278 CGTGGTTACATGAACATTTCAACTTT 59.305 34.615 0.00 0.00 43.95 2.66
2261 2693 7.221838 CGTGGTTACATGAACATTTCAACTTTT 59.778 33.333 0.00 0.00 43.95 2.27
2262 2694 8.878769 GTGGTTACATGAACATTTCAACTTTTT 58.121 29.630 0.00 0.00 43.95 1.94
2302 2734 9.855021 ATCTTTTATGGTTTAAGTAATGCACAC 57.145 29.630 0.00 0.00 0.00 3.82
2303 2735 8.851145 TCTTTTATGGTTTAAGTAATGCACACA 58.149 29.630 0.00 0.00 0.00 3.72
2304 2736 9.469807 CTTTTATGGTTTAAGTAATGCACACAA 57.530 29.630 0.00 0.00 0.00 3.33
2305 2737 9.988815 TTTTATGGTTTAAGTAATGCACACAAT 57.011 25.926 0.00 0.00 0.00 2.71
2306 2738 9.988815 TTTATGGTTTAAGTAATGCACACAATT 57.011 25.926 0.00 0.00 0.00 2.32
2307 2739 9.988815 TTATGGTTTAAGTAATGCACACAATTT 57.011 25.926 0.00 0.00 0.00 1.82
2309 2741 8.804688 TGGTTTAAGTAATGCACACAATTTAC 57.195 30.769 0.00 0.00 0.00 2.01
2310 2742 8.634444 TGGTTTAAGTAATGCACACAATTTACT 58.366 29.630 2.94 2.94 34.52 2.24
2315 2747 8.848474 AAGTAATGCACACAATTTACTAGTCT 57.152 30.769 0.00 0.00 32.79 3.24
2316 2748 8.480643 AGTAATGCACACAATTTACTAGTCTC 57.519 34.615 0.00 0.00 32.39 3.36
2317 2749 8.094548 AGTAATGCACACAATTTACTAGTCTCA 58.905 33.333 0.00 0.00 32.39 3.27
2318 2750 6.727824 ATGCACACAATTTACTAGTCTCAC 57.272 37.500 0.00 0.00 0.00 3.51
2319 2751 5.606505 TGCACACAATTTACTAGTCTCACA 58.393 37.500 0.00 0.00 0.00 3.58
2320 2752 6.230472 TGCACACAATTTACTAGTCTCACAT 58.770 36.000 0.00 0.00 0.00 3.21
2321 2753 6.147656 TGCACACAATTTACTAGTCTCACATG 59.852 38.462 0.00 0.00 0.00 3.21
2322 2754 6.537566 CACACAATTTACTAGTCTCACATGC 58.462 40.000 0.00 0.00 0.00 4.06
2323 2755 6.147656 CACACAATTTACTAGTCTCACATGCA 59.852 38.462 0.00 0.00 0.00 3.96
2324 2756 6.881065 ACACAATTTACTAGTCTCACATGCAT 59.119 34.615 0.00 0.00 0.00 3.96
2325 2757 7.391554 ACACAATTTACTAGTCTCACATGCATT 59.608 33.333 0.00 0.00 0.00 3.56
2326 2758 8.239314 CACAATTTACTAGTCTCACATGCATTT 58.761 33.333 0.00 0.00 0.00 2.32
2327 2759 8.239314 ACAATTTACTAGTCTCACATGCATTTG 58.761 33.333 6.50 6.50 0.00 2.32
2328 2760 8.453320 CAATTTACTAGTCTCACATGCATTTGA 58.547 33.333 14.56 14.56 0.00 2.69
2329 2761 7.977789 TTTACTAGTCTCACATGCATTTGAA 57.022 32.000 15.96 5.53 0.00 2.69
2330 2762 8.565896 TTTACTAGTCTCACATGCATTTGAAT 57.434 30.769 15.96 8.18 0.00 2.57
2331 2763 9.665719 TTTACTAGTCTCACATGCATTTGAATA 57.334 29.630 15.96 8.80 0.00 1.75
2332 2764 9.665719 TTACTAGTCTCACATGCATTTGAATAA 57.334 29.630 15.96 3.12 0.00 1.40
2333 2765 8.565896 ACTAGTCTCACATGCATTTGAATAAA 57.434 30.769 15.96 3.00 0.00 1.40
2334 2766 9.013229 ACTAGTCTCACATGCATTTGAATAAAA 57.987 29.630 15.96 1.77 0.00 1.52
2335 2767 9.844790 CTAGTCTCACATGCATTTGAATAAAAA 57.155 29.630 15.96 0.86 0.00 1.94
2336 2768 8.524870 AGTCTCACATGCATTTGAATAAAAAC 57.475 30.769 15.96 8.02 0.00 2.43
2337 2769 8.362639 AGTCTCACATGCATTTGAATAAAAACT 58.637 29.630 15.96 9.75 0.00 2.66
2338 2770 9.624697 GTCTCACATGCATTTGAATAAAAACTA 57.375 29.630 15.96 0.00 0.00 2.24
2343 2775 9.533253 ACATGCATTTGAATAAAAACTATAGCC 57.467 29.630 0.00 0.00 0.00 3.93
2344 2776 9.531942 CATGCATTTGAATAAAAACTATAGCCA 57.468 29.630 0.00 0.00 0.00 4.75
2425 2857 6.861065 TCACATTCAAGTGAAGTTCTAACC 57.139 37.500 4.17 0.00 44.92 2.85
2426 2858 5.763204 TCACATTCAAGTGAAGTTCTAACCC 59.237 40.000 4.17 0.00 44.92 4.11
2427 2859 4.755123 ACATTCAAGTGAAGTTCTAACCCG 59.245 41.667 4.17 0.00 37.48 5.28
2428 2860 4.411256 TTCAAGTGAAGTTCTAACCCGT 57.589 40.909 4.17 0.00 0.00 5.28
2429 2861 5.534207 TTCAAGTGAAGTTCTAACCCGTA 57.466 39.130 4.17 0.00 0.00 4.02
2430 2862 5.733620 TCAAGTGAAGTTCTAACCCGTAT 57.266 39.130 4.17 0.00 0.00 3.06
2431 2863 6.105397 TCAAGTGAAGTTCTAACCCGTATT 57.895 37.500 4.17 0.00 0.00 1.89
2432 2864 6.527423 TCAAGTGAAGTTCTAACCCGTATTT 58.473 36.000 4.17 0.00 0.00 1.40
2433 2865 6.993902 TCAAGTGAAGTTCTAACCCGTATTTT 59.006 34.615 4.17 0.00 0.00 1.82
2434 2866 7.172019 TCAAGTGAAGTTCTAACCCGTATTTTC 59.828 37.037 4.17 0.00 0.00 2.29
2435 2867 6.766429 AGTGAAGTTCTAACCCGTATTTTCT 58.234 36.000 4.17 0.00 0.00 2.52
2436 2868 7.222161 AGTGAAGTTCTAACCCGTATTTTCTT 58.778 34.615 4.17 0.00 0.00 2.52
2437 2869 7.172703 AGTGAAGTTCTAACCCGTATTTTCTTG 59.827 37.037 4.17 0.00 0.00 3.02
2438 2870 7.172019 GTGAAGTTCTAACCCGTATTTTCTTGA 59.828 37.037 4.17 0.00 0.00 3.02
2439 2871 7.172019 TGAAGTTCTAACCCGTATTTTCTTGAC 59.828 37.037 4.17 0.00 0.00 3.18
2440 2872 5.936372 AGTTCTAACCCGTATTTTCTTGACC 59.064 40.000 0.00 0.00 0.00 4.02
2441 2873 5.750352 TCTAACCCGTATTTTCTTGACCT 57.250 39.130 0.00 0.00 0.00 3.85
2442 2874 5.727434 TCTAACCCGTATTTTCTTGACCTC 58.273 41.667 0.00 0.00 0.00 3.85
2443 2875 4.360951 AACCCGTATTTTCTTGACCTCA 57.639 40.909 0.00 0.00 0.00 3.86
2444 2876 4.360951 ACCCGTATTTTCTTGACCTCAA 57.639 40.909 0.00 0.00 0.00 3.02
2445 2877 4.918588 ACCCGTATTTTCTTGACCTCAAT 58.081 39.130 0.00 0.00 35.02 2.57
2446 2878 4.700213 ACCCGTATTTTCTTGACCTCAATG 59.300 41.667 0.00 0.00 35.02 2.82
2447 2879 4.941263 CCCGTATTTTCTTGACCTCAATGA 59.059 41.667 0.00 0.00 35.02 2.57
2448 2880 5.590259 CCCGTATTTTCTTGACCTCAATGAT 59.410 40.000 0.00 0.00 35.02 2.45
2449 2881 6.238484 CCCGTATTTTCTTGACCTCAATGATC 60.238 42.308 0.00 0.00 35.02 2.92
2450 2882 6.316140 CCGTATTTTCTTGACCTCAATGATCA 59.684 38.462 0.00 0.00 35.02 2.92
2451 2883 7.148255 CCGTATTTTCTTGACCTCAATGATCAA 60.148 37.037 0.00 0.16 35.02 2.57
2452 2884 8.236586 CGTATTTTCTTGACCTCAATGATCAAA 58.763 33.333 0.00 0.00 35.02 2.69
2453 2885 9.565213 GTATTTTCTTGACCTCAATGATCAAAG 57.435 33.333 0.00 0.00 35.02 2.77
2454 2886 7.822161 TTTTCTTGACCTCAATGATCAAAGA 57.178 32.000 0.00 0.00 35.02 2.52
2455 2887 7.822161 TTTCTTGACCTCAATGATCAAAGAA 57.178 32.000 0.00 5.20 35.02 2.52
2456 2888 7.822161 TTCTTGACCTCAATGATCAAAGAAA 57.178 32.000 10.90 0.00 35.02 2.52
2457 2889 8.413309 TTCTTGACCTCAATGATCAAAGAAAT 57.587 30.769 10.90 0.00 35.02 2.17
2458 2890 8.413309 TCTTGACCTCAATGATCAAAGAAATT 57.587 30.769 0.00 0.00 35.02 1.82
2459 2891 8.301720 TCTTGACCTCAATGATCAAAGAAATTG 58.698 33.333 0.00 0.00 36.44 2.32
2460 2892 7.528996 TGACCTCAATGATCAAAGAAATTGT 57.471 32.000 0.00 0.00 40.11 2.71
2461 2893 7.954835 TGACCTCAATGATCAAAGAAATTGTT 58.045 30.769 0.00 0.00 40.11 2.83
2462 2894 7.868922 TGACCTCAATGATCAAAGAAATTGTTG 59.131 33.333 0.00 0.00 40.11 3.33
2463 2895 7.954835 ACCTCAATGATCAAAGAAATTGTTGA 58.045 30.769 0.00 0.87 40.11 3.18
2464 2896 8.423349 ACCTCAATGATCAAAGAAATTGTTGAA 58.577 29.630 0.00 0.00 40.11 2.69
2465 2897 9.263538 CCTCAATGATCAAAGAAATTGTTGAAA 57.736 29.630 0.00 0.00 40.11 2.69
2468 2900 9.325150 CAATGATCAAAGAAATTGTTGAAATGC 57.675 29.630 0.00 0.00 40.11 3.56
2469 2901 8.610248 ATGATCAAAGAAATTGTTGAAATGCA 57.390 26.923 0.00 0.00 40.11 3.96
2470 2902 8.610248 TGATCAAAGAAATTGTTGAAATGCAT 57.390 26.923 0.00 0.00 40.11 3.96
2471 2903 8.499967 TGATCAAAGAAATTGTTGAAATGCATG 58.500 29.630 0.00 0.00 40.11 4.06
2472 2904 7.789273 TCAAAGAAATTGTTGAAATGCATGT 57.211 28.000 0.00 0.00 40.11 3.21
2473 2905 7.631822 TCAAAGAAATTGTTGAAATGCATGTG 58.368 30.769 0.00 0.00 40.11 3.21
2474 2906 7.494952 TCAAAGAAATTGTTGAAATGCATGTGA 59.505 29.630 0.00 0.00 40.11 3.58
2475 2907 7.972832 AAGAAATTGTTGAAATGCATGTGAT 57.027 28.000 0.00 0.00 0.00 3.06
2476 2908 9.491675 AAAGAAATTGTTGAAATGCATGTGATA 57.508 25.926 0.00 0.00 0.00 2.15
2477 2909 8.470040 AGAAATTGTTGAAATGCATGTGATAC 57.530 30.769 0.00 0.00 0.00 2.24
2478 2910 8.308931 AGAAATTGTTGAAATGCATGTGATACT 58.691 29.630 0.00 0.00 0.00 2.12
2479 2911 8.836268 AAATTGTTGAAATGCATGTGATACTT 57.164 26.923 0.00 0.00 0.00 2.24
2480 2912 9.926158 AAATTGTTGAAATGCATGTGATACTTA 57.074 25.926 0.00 0.00 0.00 2.24
2487 2919 9.183368 TGAAATGCATGTGATACTTATAAACCA 57.817 29.630 0.00 0.00 0.00 3.67
2489 2921 9.801873 AAATGCATGTGATACTTATAAACCAAC 57.198 29.630 0.00 0.00 0.00 3.77
2490 2922 7.929941 TGCATGTGATACTTATAAACCAACA 57.070 32.000 0.00 0.00 0.00 3.33
2491 2923 8.518430 TGCATGTGATACTTATAAACCAACAT 57.482 30.769 0.00 0.00 0.00 2.71
2492 2924 9.620259 TGCATGTGATACTTATAAACCAACATA 57.380 29.630 0.00 0.00 0.00 2.29
2498 2930 9.111613 TGATACTTATAAACCAACATAAACCCG 57.888 33.333 0.00 0.00 0.00 5.28
2499 2931 9.328845 GATACTTATAAACCAACATAAACCCGA 57.671 33.333 0.00 0.00 0.00 5.14
2500 2932 9.856162 ATACTTATAAACCAACATAAACCCGAT 57.144 29.630 0.00 0.00 0.00 4.18
2501 2933 8.217131 ACTTATAAACCAACATAAACCCGATC 57.783 34.615 0.00 0.00 0.00 3.69
2502 2934 5.744666 ATAAACCAACATAAACCCGATCG 57.255 39.130 8.51 8.51 0.00 3.69
2503 2935 2.032680 ACCAACATAAACCCGATCGG 57.967 50.000 27.65 27.65 37.81 4.18
2504 2936 1.555992 ACCAACATAAACCCGATCGGA 59.444 47.619 35.42 16.09 37.50 4.55
2505 2937 2.171870 ACCAACATAAACCCGATCGGAT 59.828 45.455 35.42 17.78 37.50 4.18
2506 2938 3.388676 ACCAACATAAACCCGATCGGATA 59.611 43.478 35.42 23.12 37.50 2.59
2507 2939 4.141665 ACCAACATAAACCCGATCGGATAA 60.142 41.667 35.42 17.26 37.50 1.75
2508 2940 4.817464 CCAACATAAACCCGATCGGATAAA 59.183 41.667 35.42 17.63 37.50 1.40
2509 2941 5.297278 CCAACATAAACCCGATCGGATAAAA 59.703 40.000 35.42 16.19 37.50 1.52
2510 2942 6.016610 CCAACATAAACCCGATCGGATAAAAT 60.017 38.462 35.42 17.67 37.50 1.82
2511 2943 6.554334 ACATAAACCCGATCGGATAAAATG 57.446 37.500 35.42 27.71 37.50 2.32
2512 2944 6.059484 ACATAAACCCGATCGGATAAAATGT 58.941 36.000 35.42 28.28 37.50 2.71
2513 2945 6.204108 ACATAAACCCGATCGGATAAAATGTC 59.796 38.462 35.42 0.00 37.50 3.06
2514 2946 3.830744 ACCCGATCGGATAAAATGTCA 57.169 42.857 35.42 0.00 37.50 3.58
2515 2947 4.351874 ACCCGATCGGATAAAATGTCAT 57.648 40.909 35.42 0.00 37.50 3.06
2516 2948 4.065088 ACCCGATCGGATAAAATGTCATG 58.935 43.478 35.42 15.50 37.50 3.07
2517 2949 4.065088 CCCGATCGGATAAAATGTCATGT 58.935 43.478 35.42 0.00 37.50 3.21
2518 2950 4.152402 CCCGATCGGATAAAATGTCATGTC 59.848 45.833 35.42 0.00 37.50 3.06
2519 2951 4.991056 CCGATCGGATAAAATGTCATGTCT 59.009 41.667 30.62 0.00 37.50 3.41
2520 2952 5.466728 CCGATCGGATAAAATGTCATGTCTT 59.533 40.000 30.62 0.00 37.50 3.01
2521 2953 6.017934 CCGATCGGATAAAATGTCATGTCTTT 60.018 38.462 30.62 0.00 37.50 2.52
2522 2954 7.170828 CCGATCGGATAAAATGTCATGTCTTTA 59.829 37.037 30.62 0.00 37.50 1.85
2523 2955 8.004344 CGATCGGATAAAATGTCATGTCTTTAC 58.996 37.037 7.38 0.00 0.00 2.01
2524 2956 7.548196 TCGGATAAAATGTCATGTCTTTACC 57.452 36.000 0.00 0.00 0.00 2.85
2525 2957 7.106890 TCGGATAAAATGTCATGTCTTTACCA 58.893 34.615 0.00 0.00 0.00 3.25
2526 2958 7.773224 TCGGATAAAATGTCATGTCTTTACCAT 59.227 33.333 0.00 0.00 0.00 3.55
2527 2959 9.051679 CGGATAAAATGTCATGTCTTTACCATA 57.948 33.333 0.00 0.00 0.00 2.74
2533 2965 8.627208 AATGTCATGTCTTTACCATATGATCC 57.373 34.615 3.65 0.00 31.28 3.36
2534 2966 7.135591 TGTCATGTCTTTACCATATGATCCA 57.864 36.000 3.65 0.00 31.28 3.41
2535 2967 6.992123 TGTCATGTCTTTACCATATGATCCAC 59.008 38.462 3.65 0.00 31.28 4.02
2536 2968 6.428159 GTCATGTCTTTACCATATGATCCACC 59.572 42.308 3.65 0.00 31.28 4.61
2537 2969 6.329986 TCATGTCTTTACCATATGATCCACCT 59.670 38.462 3.65 0.00 0.00 4.00
2538 2970 6.174720 TGTCTTTACCATATGATCCACCTC 57.825 41.667 3.65 0.00 0.00 3.85
2539 2971 5.665360 TGTCTTTACCATATGATCCACCTCA 59.335 40.000 3.65 0.00 0.00 3.86
2540 2972 6.157820 TGTCTTTACCATATGATCCACCTCAA 59.842 38.462 3.65 0.00 0.00 3.02
2541 2973 6.708054 GTCTTTACCATATGATCCACCTCAAG 59.292 42.308 3.65 0.00 0.00 3.02
2542 2974 5.567037 TTACCATATGATCCACCTCAAGG 57.433 43.478 3.65 0.00 42.17 3.61
2543 2975 3.668821 ACCATATGATCCACCTCAAGGA 58.331 45.455 3.65 0.00 39.97 3.36
2544 2976 4.047166 ACCATATGATCCACCTCAAGGAA 58.953 43.478 3.65 0.00 38.93 3.36
2545 2977 4.141390 ACCATATGATCCACCTCAAGGAAC 60.141 45.833 3.65 0.00 38.93 3.62
2546 2978 4.141413 CCATATGATCCACCTCAAGGAACA 60.141 45.833 3.65 0.00 41.36 3.18
2547 2979 2.859165 TGATCCACCTCAAGGAACAC 57.141 50.000 2.30 0.00 38.93 3.32
2548 2980 1.351017 TGATCCACCTCAAGGAACACC 59.649 52.381 2.30 0.00 38.93 4.16
2549 2981 1.351017 GATCCACCTCAAGGAACACCA 59.649 52.381 2.30 0.00 38.93 4.17
2550 2982 1.217916 TCCACCTCAAGGAACACCAA 58.782 50.000 2.30 0.00 38.94 3.67
2551 2983 1.780309 TCCACCTCAAGGAACACCAAT 59.220 47.619 2.30 0.00 38.94 3.16
2552 2984 2.176798 TCCACCTCAAGGAACACCAATT 59.823 45.455 2.30 0.00 38.94 2.32
2553 2985 2.965147 CCACCTCAAGGAACACCAATTT 59.035 45.455 2.30 0.00 38.94 1.82
2554 2986 4.141135 TCCACCTCAAGGAACACCAATTTA 60.141 41.667 2.30 0.00 38.94 1.40
2555 2987 4.218417 CCACCTCAAGGAACACCAATTTAG 59.782 45.833 2.30 0.00 38.94 1.85
2556 2988 4.827284 CACCTCAAGGAACACCAATTTAGT 59.173 41.667 2.30 0.00 38.94 2.24
2557 2989 5.048713 CACCTCAAGGAACACCAATTTAGTC 60.049 44.000 2.30 0.00 38.94 2.59
2558 2990 5.163088 ACCTCAAGGAACACCAATTTAGTCT 60.163 40.000 2.30 0.00 38.94 3.24
2559 2991 5.412904 CCTCAAGGAACACCAATTTAGTCTC 59.587 44.000 0.00 0.00 37.39 3.36
2560 2992 4.994852 TCAAGGAACACCAATTTAGTCTCG 59.005 41.667 0.00 0.00 0.00 4.04
2561 2993 4.618920 AGGAACACCAATTTAGTCTCGT 57.381 40.909 0.00 0.00 0.00 4.18
2562 2994 4.969484 AGGAACACCAATTTAGTCTCGTT 58.031 39.130 0.00 0.00 0.00 3.85
2563 2995 5.374071 AGGAACACCAATTTAGTCTCGTTT 58.626 37.500 0.00 0.00 0.00 3.60
2564 2996 5.238650 AGGAACACCAATTTAGTCTCGTTTG 59.761 40.000 0.00 0.00 0.00 2.93
2565 2997 5.008316 GGAACACCAATTTAGTCTCGTTTGT 59.992 40.000 0.00 0.00 0.00 2.83
2566 2998 6.445357 AACACCAATTTAGTCTCGTTTGTT 57.555 33.333 0.00 0.00 0.00 2.83
2567 2999 6.445357 ACACCAATTTAGTCTCGTTTGTTT 57.555 33.333 0.00 0.00 0.00 2.83
2568 3000 7.556733 ACACCAATTTAGTCTCGTTTGTTTA 57.443 32.000 0.00 0.00 0.00 2.01
2569 3001 8.161699 ACACCAATTTAGTCTCGTTTGTTTAT 57.838 30.769 0.00 0.00 0.00 1.40
2570 3002 8.626526 ACACCAATTTAGTCTCGTTTGTTTATT 58.373 29.630 0.00 0.00 0.00 1.40
2571 3003 9.113876 CACCAATTTAGTCTCGTTTGTTTATTC 57.886 33.333 0.00 0.00 0.00 1.75
2572 3004 9.063615 ACCAATTTAGTCTCGTTTGTTTATTCT 57.936 29.630 0.00 0.00 0.00 2.40
2632 3064 9.103861 TGAACTTATAATGATCAAATACGTGCA 57.896 29.630 0.00 7.02 0.00 4.57
2633 3065 9.929722 GAACTTATAATGATCAAATACGTGCAA 57.070 29.630 0.00 0.00 0.00 4.08
2640 3072 7.975866 ATGATCAAATACGTGCAATTTTCTC 57.024 32.000 0.00 0.00 0.00 2.87
2641 3073 6.907741 TGATCAAATACGTGCAATTTTCTCA 58.092 32.000 0.00 0.00 0.00 3.27
2642 3074 7.366513 TGATCAAATACGTGCAATTTTCTCAA 58.633 30.769 0.00 0.00 0.00 3.02
2643 3075 7.864882 TGATCAAATACGTGCAATTTTCTCAAA 59.135 29.630 0.00 0.00 0.00 2.69
2644 3076 7.993821 TCAAATACGTGCAATTTTCTCAAAA 57.006 28.000 0.00 0.00 34.41 2.44
2645 3077 7.836512 TCAAATACGTGCAATTTTCTCAAAAC 58.163 30.769 0.00 0.00 32.37 2.43
2646 3078 7.704472 TCAAATACGTGCAATTTTCTCAAAACT 59.296 29.630 0.00 0.00 32.37 2.66
2647 3079 6.991485 ATACGTGCAATTTTCTCAAAACTG 57.009 33.333 0.00 0.00 32.37 3.16
2648 3080 4.992688 ACGTGCAATTTTCTCAAAACTGA 58.007 34.783 0.00 0.00 29.64 3.41
2649 3081 5.591099 ACGTGCAATTTTCTCAAAACTGAT 58.409 33.333 0.00 0.00 29.64 2.90
2650 3082 6.042143 ACGTGCAATTTTCTCAAAACTGATT 58.958 32.000 0.00 0.00 29.64 2.57
2651 3083 6.019640 ACGTGCAATTTTCTCAAAACTGATTG 60.020 34.615 0.00 0.00 29.64 2.67
2652 3084 6.198778 CGTGCAATTTTCTCAAAACTGATTGA 59.801 34.615 0.00 0.00 37.70 2.57
2653 3085 7.095940 CGTGCAATTTTCTCAAAACTGATTGAT 60.096 33.333 0.00 0.00 38.55 2.57
2654 3086 8.553696 GTGCAATTTTCTCAAAACTGATTGATT 58.446 29.630 0.00 0.00 38.55 2.57
2655 3087 9.111613 TGCAATTTTCTCAAAACTGATTGATTT 57.888 25.926 0.00 0.00 38.55 2.17
2744 3176 4.681074 AAGCTCACTAATAGGAGAAGGC 57.319 45.455 9.09 0.98 32.87 4.35
2745 3177 2.969262 AGCTCACTAATAGGAGAAGGCC 59.031 50.000 0.00 0.00 32.87 5.19
2746 3178 2.700897 GCTCACTAATAGGAGAAGGCCA 59.299 50.000 5.01 0.00 32.87 5.36
2747 3179 3.134804 GCTCACTAATAGGAGAAGGCCAA 59.865 47.826 5.01 0.00 32.87 4.52
2748 3180 4.202409 GCTCACTAATAGGAGAAGGCCAAT 60.202 45.833 5.01 0.00 32.87 3.16
2749 3181 5.688766 GCTCACTAATAGGAGAAGGCCAATT 60.689 44.000 5.01 0.00 32.87 2.32
2750 3182 6.327386 TCACTAATAGGAGAAGGCCAATTT 57.673 37.500 5.01 0.00 0.00 1.82
2751 3183 6.122277 TCACTAATAGGAGAAGGCCAATTTG 58.878 40.000 5.01 0.00 0.00 2.32
2752 3184 5.300286 CACTAATAGGAGAAGGCCAATTTGG 59.700 44.000 11.27 11.27 41.55 3.28
2761 3193 4.455906 CCAATTTGGCTGCCGGGC 62.456 66.667 13.32 13.32 41.27 6.13
2762 3194 3.384532 CAATTTGGCTGCCGGGCT 61.385 61.111 21.46 0.00 41.48 5.19
2763 3195 3.070576 AATTTGGCTGCCGGGCTC 61.071 61.111 21.46 11.71 41.48 4.70
2764 3196 3.884704 AATTTGGCTGCCGGGCTCA 62.885 57.895 21.46 12.84 41.48 4.26
2853 3285 9.689976 TTTTTGTGTGGTAGATAATTTGATGTG 57.310 29.630 0.00 0.00 0.00 3.21
2854 3286 7.994425 TTGTGTGGTAGATAATTTGATGTGT 57.006 32.000 0.00 0.00 0.00 3.72
2855 3287 7.376435 TGTGTGGTAGATAATTTGATGTGTG 57.624 36.000 0.00 0.00 0.00 3.82
2856 3288 7.164803 TGTGTGGTAGATAATTTGATGTGTGA 58.835 34.615 0.00 0.00 0.00 3.58
2857 3289 7.334171 TGTGTGGTAGATAATTTGATGTGTGAG 59.666 37.037 0.00 0.00 0.00 3.51
2858 3290 6.823182 TGTGGTAGATAATTTGATGTGTGAGG 59.177 38.462 0.00 0.00 0.00 3.86
2859 3291 6.823689 GTGGTAGATAATTTGATGTGTGAGGT 59.176 38.462 0.00 0.00 0.00 3.85
2860 3292 7.336931 GTGGTAGATAATTTGATGTGTGAGGTT 59.663 37.037 0.00 0.00 0.00 3.50
2861 3293 7.552687 TGGTAGATAATTTGATGTGTGAGGTTC 59.447 37.037 0.00 0.00 0.00 3.62
2862 3294 6.668541 AGATAATTTGATGTGTGAGGTTCG 57.331 37.500 0.00 0.00 0.00 3.95
2863 3295 3.559238 AATTTGATGTGTGAGGTTCGC 57.441 42.857 0.00 0.00 0.00 4.70
2864 3296 2.254546 TTTGATGTGTGAGGTTCGCT 57.745 45.000 0.00 0.00 0.00 4.93
2865 3297 1.511850 TTGATGTGTGAGGTTCGCTG 58.488 50.000 0.00 0.00 0.00 5.18
2866 3298 0.950555 TGATGTGTGAGGTTCGCTGC 60.951 55.000 0.00 0.00 0.00 5.25
2867 3299 0.950555 GATGTGTGAGGTTCGCTGCA 60.951 55.000 0.00 0.00 0.00 4.41
2868 3300 0.534877 ATGTGTGAGGTTCGCTGCAA 60.535 50.000 0.00 0.00 0.00 4.08
2869 3301 0.746204 TGTGTGAGGTTCGCTGCAAA 60.746 50.000 0.00 0.00 0.00 3.68
2870 3302 0.380378 GTGTGAGGTTCGCTGCAAAA 59.620 50.000 0.00 0.00 0.00 2.44
2871 3303 1.001378 GTGTGAGGTTCGCTGCAAAAT 60.001 47.619 0.00 0.00 0.00 1.82
2872 3304 1.680735 TGTGAGGTTCGCTGCAAAATT 59.319 42.857 0.00 0.00 0.00 1.82
2873 3305 2.287547 TGTGAGGTTCGCTGCAAAATTC 60.288 45.455 0.00 0.00 0.00 2.17
2874 3306 1.952990 TGAGGTTCGCTGCAAAATTCA 59.047 42.857 0.00 0.07 0.00 2.57
2875 3307 2.360483 TGAGGTTCGCTGCAAAATTCAA 59.640 40.909 0.00 0.00 0.00 2.69
2876 3308 2.726241 GAGGTTCGCTGCAAAATTCAAC 59.274 45.455 0.00 0.00 0.00 3.18
2877 3309 2.362077 AGGTTCGCTGCAAAATTCAACT 59.638 40.909 0.00 0.00 0.00 3.16
2878 3310 2.726241 GGTTCGCTGCAAAATTCAACTC 59.274 45.455 0.00 0.00 0.00 3.01
2879 3311 3.371168 GTTCGCTGCAAAATTCAACTCA 58.629 40.909 0.00 0.00 0.00 3.41
2880 3312 3.921119 TCGCTGCAAAATTCAACTCAT 57.079 38.095 0.00 0.00 0.00 2.90
2881 3313 4.241590 TCGCTGCAAAATTCAACTCATT 57.758 36.364 0.00 0.00 0.00 2.57
2882 3314 4.619973 TCGCTGCAAAATTCAACTCATTT 58.380 34.783 0.00 0.00 0.00 2.32
2883 3315 4.445052 TCGCTGCAAAATTCAACTCATTTG 59.555 37.500 0.00 0.00 36.19 2.32
2884 3316 4.376615 CGCTGCAAAATTCAACTCATTTGG 60.377 41.667 0.00 0.00 35.69 3.28
2885 3317 4.751098 GCTGCAAAATTCAACTCATTTGGA 59.249 37.500 0.00 0.00 35.69 3.53
2886 3318 5.333568 GCTGCAAAATTCAACTCATTTGGAC 60.334 40.000 0.00 0.00 35.69 4.02
2887 3319 5.668471 TGCAAAATTCAACTCATTTGGACA 58.332 33.333 0.00 0.00 35.69 4.02
2888 3320 6.289834 TGCAAAATTCAACTCATTTGGACAT 58.710 32.000 0.00 0.00 35.69 3.06
2889 3321 6.766944 TGCAAAATTCAACTCATTTGGACATT 59.233 30.769 0.00 0.00 35.69 2.71
2890 3322 7.282675 TGCAAAATTCAACTCATTTGGACATTT 59.717 29.630 0.00 0.00 35.69 2.32
2891 3323 7.588488 GCAAAATTCAACTCATTTGGACATTTG 59.412 33.333 0.00 0.00 35.69 2.32
2892 3324 8.828644 CAAAATTCAACTCATTTGGACATTTGA 58.171 29.630 0.00 0.00 35.69 2.69
2893 3325 8.597662 AAATTCAACTCATTTGGACATTTGAG 57.402 30.769 9.26 9.26 41.06 3.02
2894 3326 5.125100 TCAACTCATTTGGACATTTGAGC 57.875 39.130 10.25 0.00 39.33 4.26
2895 3327 4.022068 TCAACTCATTTGGACATTTGAGCC 60.022 41.667 10.25 0.00 39.33 4.70
2896 3328 3.771216 ACTCATTTGGACATTTGAGCCT 58.229 40.909 10.25 0.00 39.33 4.58
2897 3329 3.760684 ACTCATTTGGACATTTGAGCCTC 59.239 43.478 10.25 0.00 39.33 4.70
2898 3330 4.015084 CTCATTTGGACATTTGAGCCTCT 58.985 43.478 0.00 0.00 30.23 3.69
2899 3331 4.012374 TCATTTGGACATTTGAGCCTCTC 58.988 43.478 0.00 0.00 0.00 3.20
2900 3332 3.795688 TTTGGACATTTGAGCCTCTCT 57.204 42.857 0.00 0.00 0.00 3.10
2901 3333 3.340814 TTGGACATTTGAGCCTCTCTC 57.659 47.619 0.00 0.00 42.23 3.20
2902 3334 1.205655 TGGACATTTGAGCCTCTCTCG 59.794 52.381 0.00 0.00 44.86 4.04
2903 3335 1.472376 GGACATTTGAGCCTCTCTCGG 60.472 57.143 0.00 0.00 44.86 4.63
2927 3359 4.584327 AAAAAGACAAAATCGGGGTCTG 57.416 40.909 0.00 0.00 40.80 3.51
2928 3360 2.951229 AAGACAAAATCGGGGTCTGT 57.049 45.000 0.00 0.00 40.80 3.41
2929 3361 4.360951 AAAGACAAAATCGGGGTCTGTA 57.639 40.909 0.00 0.00 40.80 2.74
2930 3362 4.360951 AAGACAAAATCGGGGTCTGTAA 57.639 40.909 0.00 0.00 40.80 2.41
2931 3363 4.360951 AGACAAAATCGGGGTCTGTAAA 57.639 40.909 0.00 0.00 40.21 2.01
2932 3364 4.721132 AGACAAAATCGGGGTCTGTAAAA 58.279 39.130 0.00 0.00 40.21 1.52
2933 3365 5.134661 AGACAAAATCGGGGTCTGTAAAAA 58.865 37.500 0.00 0.00 40.21 1.94
2956 3388 9.705290 AAAAAGTTTACTGTTCATGAACTGTTT 57.295 25.926 38.98 28.92 46.58 2.83
2957 3389 9.705290 AAAAGTTTACTGTTCATGAACTGTTTT 57.295 25.926 38.98 31.42 46.58 2.43
2958 3390 8.687824 AAGTTTACTGTTCATGAACTGTTTTG 57.312 30.769 38.98 23.52 46.58 2.44
2959 3391 8.050778 AGTTTACTGTTCATGAACTGTTTTGA 57.949 30.769 38.98 26.09 46.58 2.69
2960 3392 7.968405 AGTTTACTGTTCATGAACTGTTTTGAC 59.032 33.333 38.98 30.93 46.58 3.18
2961 3393 5.248870 ACTGTTCATGAACTGTTTTGACC 57.751 39.130 33.14 10.82 46.58 4.02
2962 3394 4.097892 ACTGTTCATGAACTGTTTTGACCC 59.902 41.667 33.14 10.38 46.58 4.46
2963 3395 3.066064 TGTTCATGAACTGTTTTGACCCG 59.934 43.478 32.57 0.00 41.67 5.28
2964 3396 3.201353 TCATGAACTGTTTTGACCCGA 57.799 42.857 0.00 0.00 0.00 5.14
2965 3397 3.750371 TCATGAACTGTTTTGACCCGAT 58.250 40.909 0.00 0.00 0.00 4.18
2966 3398 4.141287 TCATGAACTGTTTTGACCCGATT 58.859 39.130 0.00 0.00 0.00 3.34
2967 3399 4.582656 TCATGAACTGTTTTGACCCGATTT 59.417 37.500 0.00 0.00 0.00 2.17
2968 3400 4.300189 TGAACTGTTTTGACCCGATTTG 57.700 40.909 0.00 0.00 0.00 2.32
2969 3401 3.697045 TGAACTGTTTTGACCCGATTTGT 59.303 39.130 0.00 0.00 0.00 2.83
2970 3402 3.982576 ACTGTTTTGACCCGATTTGTC 57.017 42.857 0.00 0.00 0.00 3.18
2971 3403 3.551846 ACTGTTTTGACCCGATTTGTCT 58.448 40.909 0.00 0.00 33.83 3.41
2972 3404 3.951680 ACTGTTTTGACCCGATTTGTCTT 59.048 39.130 0.00 0.00 33.83 3.01
2973 3405 4.401202 ACTGTTTTGACCCGATTTGTCTTT 59.599 37.500 0.00 0.00 33.83 2.52
2974 3406 5.105513 ACTGTTTTGACCCGATTTGTCTTTT 60.106 36.000 0.00 0.00 33.83 2.27
2975 3407 5.725362 TGTTTTGACCCGATTTGTCTTTTT 58.275 33.333 0.00 0.00 33.83 1.94
2989 3421 4.481195 TTTTTGCCGAGAGCTGCT 57.519 50.000 0.00 0.00 44.23 4.24
2990 3422 2.247790 TTTTTGCCGAGAGCTGCTC 58.752 52.632 21.72 21.72 44.23 4.26
2991 3423 0.534877 TTTTTGCCGAGAGCTGCTCA 60.535 50.000 29.49 8.15 44.15 4.26
2992 3424 0.534877 TTTTGCCGAGAGCTGCTCAA 60.535 50.000 29.49 13.78 44.15 3.02
2993 3425 0.534877 TTTGCCGAGAGCTGCTCAAA 60.535 50.000 29.49 18.50 44.15 2.69
2994 3426 0.321919 TTGCCGAGAGCTGCTCAAAT 60.322 50.000 29.49 10.97 44.15 2.32
2995 3427 0.536724 TGCCGAGAGCTGCTCAAATA 59.463 50.000 29.49 10.41 44.15 1.40
2996 3428 1.139654 TGCCGAGAGCTGCTCAAATAT 59.860 47.619 29.49 10.20 44.15 1.28
2997 3429 1.797635 GCCGAGAGCTGCTCAAATATC 59.202 52.381 29.49 17.18 44.15 1.63
2998 3430 2.411904 CCGAGAGCTGCTCAAATATCC 58.588 52.381 29.49 9.58 44.15 2.59
2999 3431 2.224137 CCGAGAGCTGCTCAAATATCCA 60.224 50.000 29.49 0.00 44.15 3.41
3000 3432 3.461061 CGAGAGCTGCTCAAATATCCAA 58.539 45.455 29.49 0.00 44.15 3.53
3001 3433 3.873361 CGAGAGCTGCTCAAATATCCAAA 59.127 43.478 29.49 0.00 44.15 3.28
3002 3434 4.514441 CGAGAGCTGCTCAAATATCCAAAT 59.486 41.667 29.49 5.90 44.15 2.32
3003 3435 5.560375 CGAGAGCTGCTCAAATATCCAAATG 60.560 44.000 29.49 3.43 44.15 2.32
3004 3436 5.443283 AGAGCTGCTCAAATATCCAAATGA 58.557 37.500 29.49 0.00 32.06 2.57
3005 3437 5.531659 AGAGCTGCTCAAATATCCAAATGAG 59.468 40.000 29.49 0.00 41.69 2.90
3006 3438 5.198965 AGCTGCTCAAATATCCAAATGAGT 58.801 37.500 0.00 0.00 41.03 3.41
3007 3439 5.655532 AGCTGCTCAAATATCCAAATGAGTT 59.344 36.000 0.00 0.00 41.03 3.01
3008 3440 5.747197 GCTGCTCAAATATCCAAATGAGTTG 59.253 40.000 0.00 0.00 41.03 3.16
3009 3441 6.405065 GCTGCTCAAATATCCAAATGAGTTGA 60.405 38.462 0.00 0.00 41.03 3.18
3010 3442 7.465353 TGCTCAAATATCCAAATGAGTTGAA 57.535 32.000 0.00 0.00 41.03 2.69
3011 3443 7.894708 TGCTCAAATATCCAAATGAGTTGAAA 58.105 30.769 0.00 0.00 41.03 2.69
3012 3444 8.533657 TGCTCAAATATCCAAATGAGTTGAAAT 58.466 29.630 0.00 0.00 41.03 2.17
3013 3445 9.374838 GCTCAAATATCCAAATGAGTTGAAATT 57.625 29.630 0.00 0.00 41.03 1.82
3016 3448 9.763465 CAAATATCCAAATGAGTTGAAATTTGC 57.237 29.630 0.00 0.00 40.74 3.68
3017 3449 9.504708 AAATATCCAAATGAGTTGAAATTTGCA 57.495 25.926 0.00 0.00 40.74 4.08
3018 3450 8.712285 ATATCCAAATGAGTTGAAATTTGCAG 57.288 30.769 0.00 0.00 40.74 4.41
3019 3451 4.751098 TCCAAATGAGTTGAAATTTGCAGC 59.249 37.500 0.00 0.00 40.74 5.25
3020 3452 4.376615 CCAAATGAGTTGAAATTTGCAGCG 60.377 41.667 0.00 0.00 40.74 5.18
3021 3453 2.420628 TGAGTTGAAATTTGCAGCGG 57.579 45.000 0.00 0.00 0.00 5.52
3022 3454 1.680735 TGAGTTGAAATTTGCAGCGGT 59.319 42.857 0.00 0.00 0.00 5.68
3023 3455 2.881513 TGAGTTGAAATTTGCAGCGGTA 59.118 40.909 0.00 0.00 0.00 4.02
3024 3456 3.234386 GAGTTGAAATTTGCAGCGGTAC 58.766 45.455 0.00 0.00 0.00 3.34
3025 3457 2.884639 AGTTGAAATTTGCAGCGGTACT 59.115 40.909 0.00 0.00 0.00 2.73
3026 3458 3.058224 AGTTGAAATTTGCAGCGGTACTC 60.058 43.478 0.00 0.00 0.00 2.59
3027 3459 2.499197 TGAAATTTGCAGCGGTACTCA 58.501 42.857 0.00 0.00 0.00 3.41
3028 3460 2.225491 TGAAATTTGCAGCGGTACTCAC 59.775 45.455 0.00 0.00 0.00 3.51
3029 3461 0.796312 AATTTGCAGCGGTACTCACG 59.204 50.000 0.00 0.00 0.00 4.35
3038 3470 2.961522 CGGTACTCACGCAACAAATT 57.038 45.000 0.00 0.00 0.00 1.82
3040 3472 4.593597 CGGTACTCACGCAACAAATTAT 57.406 40.909 0.00 0.00 0.00 1.28
3041 3473 4.574759 CGGTACTCACGCAACAAATTATC 58.425 43.478 0.00 0.00 0.00 1.75
3042 3474 4.328983 CGGTACTCACGCAACAAATTATCT 59.671 41.667 0.00 0.00 0.00 1.98
3043 3475 5.517411 CGGTACTCACGCAACAAATTATCTA 59.483 40.000 0.00 0.00 0.00 1.98
3044 3476 6.507456 CGGTACTCACGCAACAAATTATCTAC 60.507 42.308 0.00 0.00 0.00 2.59
3045 3477 6.534079 GGTACTCACGCAACAAATTATCTACT 59.466 38.462 0.00 0.00 0.00 2.57
3046 3478 7.703621 GGTACTCACGCAACAAATTATCTACTA 59.296 37.037 0.00 0.00 0.00 1.82
3047 3479 9.079833 GTACTCACGCAACAAATTATCTACTAA 57.920 33.333 0.00 0.00 0.00 2.24
3048 3480 8.542497 ACTCACGCAACAAATTATCTACTAAA 57.458 30.769 0.00 0.00 0.00 1.85
3049 3481 8.440833 ACTCACGCAACAAATTATCTACTAAAC 58.559 33.333 0.00 0.00 0.00 2.01
3050 3482 8.312896 TCACGCAACAAATTATCTACTAAACA 57.687 30.769 0.00 0.00 0.00 2.83
3051 3483 8.775527 TCACGCAACAAATTATCTACTAAACAA 58.224 29.630 0.00 0.00 0.00 2.83
3052 3484 9.388346 CACGCAACAAATTATCTACTAAACAAA 57.612 29.630 0.00 0.00 0.00 2.83
3053 3485 9.953697 ACGCAACAAATTATCTACTAAACAAAA 57.046 25.926 0.00 0.00 0.00 2.44
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 3.485743 AGTTTTCGAAATTGCGCAAGTTC 59.514 39.130 39.17 39.17 40.69 3.01
8 9 3.233578 TGATGAGTTTTCGAAATTGCGC 58.766 40.909 12.12 0.00 0.00 6.09
62 66 3.925688 AATTAGTTACTGTGCGCGATG 57.074 42.857 12.10 0.00 0.00 3.84
68 72 7.843490 TGACTGGATTAATTAGTTACTGTGC 57.157 36.000 0.00 0.00 0.00 4.57
113 117 7.048512 ACCAAAATCAGCAGGAGTAATAGTAC 58.951 38.462 0.00 0.00 0.00 2.73
114 118 7.195374 ACCAAAATCAGCAGGAGTAATAGTA 57.805 36.000 0.00 0.00 0.00 1.82
115 119 6.067217 ACCAAAATCAGCAGGAGTAATAGT 57.933 37.500 0.00 0.00 0.00 2.12
116 120 7.225538 CAGTACCAAAATCAGCAGGAGTAATAG 59.774 40.741 0.00 0.00 0.00 1.73
117 121 7.047891 CAGTACCAAAATCAGCAGGAGTAATA 58.952 38.462 0.00 0.00 0.00 0.98
118 122 5.882557 CAGTACCAAAATCAGCAGGAGTAAT 59.117 40.000 0.00 0.00 0.00 1.89
119 123 5.221843 ACAGTACCAAAATCAGCAGGAGTAA 60.222 40.000 0.00 0.00 0.00 2.24
120 124 4.286032 ACAGTACCAAAATCAGCAGGAGTA 59.714 41.667 0.00 0.00 0.00 2.59
121 125 3.073062 ACAGTACCAAAATCAGCAGGAGT 59.927 43.478 0.00 0.00 0.00 3.85
122 126 3.679389 ACAGTACCAAAATCAGCAGGAG 58.321 45.455 0.00 0.00 0.00 3.69
123 127 3.788227 ACAGTACCAAAATCAGCAGGA 57.212 42.857 0.00 0.00 0.00 3.86
124 128 5.957842 TTTACAGTACCAAAATCAGCAGG 57.042 39.130 0.00 0.00 0.00 4.85
125 129 7.202016 TCTTTTACAGTACCAAAATCAGCAG 57.798 36.000 0.00 0.00 0.00 4.24
126 130 7.665559 AGATCTTTTACAGTACCAAAATCAGCA 59.334 33.333 0.00 0.00 0.00 4.41
127 131 8.045176 AGATCTTTTACAGTACCAAAATCAGC 57.955 34.615 0.00 0.00 0.00 4.26
128 132 8.669243 GGAGATCTTTTACAGTACCAAAATCAG 58.331 37.037 0.00 0.00 0.00 2.90
129 133 8.160765 TGGAGATCTTTTACAGTACCAAAATCA 58.839 33.333 0.00 0.00 0.00 2.57
130 134 8.451748 GTGGAGATCTTTTACAGTACCAAAATC 58.548 37.037 0.00 0.00 0.00 2.17
131 135 7.942341 TGTGGAGATCTTTTACAGTACCAAAAT 59.058 33.333 0.00 0.00 0.00 1.82
132 136 7.284074 TGTGGAGATCTTTTACAGTACCAAAA 58.716 34.615 0.00 0.00 0.00 2.44
133 137 6.833041 TGTGGAGATCTTTTACAGTACCAAA 58.167 36.000 0.00 0.00 0.00 3.28
134 138 6.428083 TGTGGAGATCTTTTACAGTACCAA 57.572 37.500 0.00 0.00 0.00 3.67
135 139 6.428083 TTGTGGAGATCTTTTACAGTACCA 57.572 37.500 0.00 0.00 0.00 3.25
136 140 6.935208 ACTTTGTGGAGATCTTTTACAGTACC 59.065 38.462 0.00 0.00 0.00 3.34
226 486 3.488384 GCCGTGTCTTTTGTCAATCACAA 60.488 43.478 0.00 0.00 43.68 3.33
237 497 3.498777 GCTAGAGAAAAGCCGTGTCTTTT 59.501 43.478 0.00 6.90 45.77 2.27
238 498 3.067833 GCTAGAGAAAAGCCGTGTCTTT 58.932 45.455 0.00 0.00 37.86 2.52
551 823 0.701731 TTTGACCCCGGACATCCATT 59.298 50.000 0.73 0.00 35.14 3.16
559 831 2.961531 TCATTTTCTTTGACCCCGGA 57.038 45.000 0.73 0.00 0.00 5.14
788 1109 6.683974 AAGTTGCATGGACTGATATGTTAC 57.316 37.500 0.00 0.00 0.00 2.50
832 1153 5.491507 CCAGATGGATGCTAGCTAGCCAG 62.492 56.522 36.45 19.45 42.55 4.85
833 1154 3.675854 CCAGATGGATGCTAGCTAGCCA 61.676 54.545 36.45 28.26 42.55 4.75
834 1155 1.066286 CCAGATGGATGCTAGCTAGCC 60.066 57.143 36.45 24.33 42.55 3.93
835 1156 1.622811 ACCAGATGGATGCTAGCTAGC 59.377 52.381 34.20 34.20 43.29 3.42
836 1157 2.896044 TCACCAGATGGATGCTAGCTAG 59.104 50.000 16.84 16.84 38.94 3.42
837 1158 2.962859 TCACCAGATGGATGCTAGCTA 58.037 47.619 17.23 2.58 38.94 3.32
866 1203 0.533755 CAGATAAAGGGGAGGCAGCG 60.534 60.000 0.00 0.00 0.00 5.18
931 1268 2.614057 GGGAATGAGATTGTTGTAGCGG 59.386 50.000 0.00 0.00 0.00 5.52
933 1270 3.063997 CGTGGGAATGAGATTGTTGTAGC 59.936 47.826 0.00 0.00 0.00 3.58
1145 1482 5.046950 GGAGGACAAGATCACAAGAGTACTT 60.047 44.000 0.00 0.00 36.73 2.24
1146 1483 4.464597 GGAGGACAAGATCACAAGAGTACT 59.535 45.833 0.00 0.00 0.00 2.73
1189 1532 5.353956 TGGCAAACGATGGATATATACATGC 59.646 40.000 15.47 12.77 29.60 4.06
1205 1568 5.052502 GCAAACAAAAATCAAATGGCAAACG 60.053 36.000 0.00 0.00 0.00 3.60
1208 1571 5.571784 TGCAAACAAAAATCAAATGGCAA 57.428 30.435 0.00 0.00 0.00 4.52
1240 1610 0.813184 CGCCCAATCTGCTTCACATT 59.187 50.000 0.00 0.00 0.00 2.71
1260 1630 0.449388 CTTGTTCTTGAGGCGCCATC 59.551 55.000 31.54 22.55 0.00 3.51
1690 2060 2.280552 TTCGGAAGGTAGCACGGCT 61.281 57.895 3.87 3.87 43.41 5.52
1703 2073 1.215382 CGCCATCAGAGTGTTCGGA 59.785 57.895 0.00 0.00 32.06 4.55
1707 2077 2.029288 CGTGCGCCATCAGAGTGTT 61.029 57.895 4.18 0.00 0.00 3.32
1727 2097 1.809684 AGCTGTTAAAGGCGAAGGAC 58.190 50.000 0.00 0.00 0.00 3.85
1739 2109 1.179152 TACGCTGCCAGTAGCTGTTA 58.821 50.000 6.18 0.00 44.23 2.41
1838 2208 2.946762 GTGGCCTGAAGCAACGTC 59.053 61.111 3.32 0.00 46.50 4.34
1853 2224 2.874648 TATGCTCGCAGGCCTTGGTG 62.875 60.000 0.00 0.00 0.00 4.17
1869 2240 6.540189 GCCAGTAAGTATTATGGGCTGATATG 59.460 42.308 0.00 0.00 44.34 1.78
1870 2241 6.353082 GGCCAGTAAGTATTATGGGCTGATAT 60.353 42.308 9.17 0.00 45.89 1.63
1874 2245 3.412386 GGCCAGTAAGTATTATGGGCTG 58.588 50.000 9.17 0.00 45.89 4.85
1875 2246 2.375509 GGGCCAGTAAGTATTATGGGCT 59.624 50.000 15.09 0.00 45.89 5.19
1877 2248 3.244911 CCTGGGCCAGTAAGTATTATGGG 60.245 52.174 30.68 8.98 33.02 4.00
1878 2249 3.650942 TCCTGGGCCAGTAAGTATTATGG 59.349 47.826 30.68 12.90 34.47 2.74
1894 2271 9.277783 CATTTAAGATTCATAAGTAGTCCTGGG 57.722 37.037 0.00 0.00 0.00 4.45
1909 2286 9.788960 GATTGTGAACCCTTACATTTAAGATTC 57.211 33.333 0.00 4.90 37.49 2.52
1912 2289 7.393234 CCAGATTGTGAACCCTTACATTTAAGA 59.607 37.037 0.00 0.00 37.49 2.10
1921 2323 1.005450 GGGCCAGATTGTGAACCCTTA 59.995 52.381 4.39 0.00 38.65 2.69
1933 2361 4.669768 TCCTCCTATTTAAATGGGCCAGAT 59.330 41.667 22.36 5.64 37.01 2.90
1945 2373 6.328592 ACCGATAATTCCCTCCTCCTATTTA 58.671 40.000 0.00 0.00 0.00 1.40
1954 2382 2.495084 GCAAGACCGATAATTCCCTCC 58.505 52.381 0.00 0.00 0.00 4.30
1957 2386 2.640316 AGGCAAGACCGATAATTCCC 57.360 50.000 0.00 0.00 46.52 3.97
1960 2389 6.530019 AATTTGAAGGCAAGACCGATAATT 57.470 33.333 0.00 0.00 46.52 1.40
1967 2396 4.379499 CGACCTAAATTTGAAGGCAAGACC 60.379 45.833 6.88 0.00 36.24 3.85
1972 2401 2.227865 GCACGACCTAAATTTGAAGGCA 59.772 45.455 6.88 0.00 36.24 4.75
1979 2408 5.427036 TTTCGAAAGCACGACCTAAATTT 57.573 34.783 6.47 0.00 41.97 1.82
1985 2414 3.314080 TCAAAATTTCGAAAGCACGACCT 59.686 39.130 16.80 0.00 41.97 3.85
2034 2463 9.183368 ACCTGCAAGAAAAATAAAAATCCAAAA 57.817 25.926 0.00 0.00 34.07 2.44
2052 2481 2.357009 GGCACTCATCATAACCTGCAAG 59.643 50.000 0.00 0.00 0.00 4.01
2108 2540 4.424061 TGGAAATCATTTGCACTTCTCG 57.576 40.909 0.00 0.00 36.01 4.04
2114 2546 7.062605 CACAGTAATCTTGGAAATCATTTGCAC 59.937 37.037 3.40 0.00 40.80 4.57
2117 2549 7.092079 TGCACAGTAATCTTGGAAATCATTTG 58.908 34.615 0.00 0.00 0.00 2.32
2134 2566 9.549509 GTTATCGATTAATTTTGTTGCACAGTA 57.450 29.630 1.71 0.00 0.00 2.74
2135 2567 7.540745 GGTTATCGATTAATTTTGTTGCACAGT 59.459 33.333 1.71 0.00 0.00 3.55
2136 2568 7.540400 TGGTTATCGATTAATTTTGTTGCACAG 59.460 33.333 1.71 0.00 0.00 3.66
2137 2569 7.327275 GTGGTTATCGATTAATTTTGTTGCACA 59.673 33.333 1.71 0.00 0.00 4.57
2144 2576 8.909708 ACACATGTGGTTATCGATTAATTTTG 57.090 30.769 28.64 0.00 34.19 2.44
2145 2577 9.567848 GAACACATGTGGTTATCGATTAATTTT 57.432 29.630 28.64 8.66 34.19 1.82
2146 2578 8.956426 AGAACACATGTGGTTATCGATTAATTT 58.044 29.630 28.64 9.29 34.19 1.82
2152 2584 3.623060 GCAGAACACATGTGGTTATCGAT 59.377 43.478 28.64 2.16 34.19 3.59
2154 2586 2.741517 TGCAGAACACATGTGGTTATCG 59.258 45.455 28.64 13.42 34.19 2.92
2160 2592 2.490509 ACATCATGCAGAACACATGTGG 59.509 45.455 28.64 12.62 44.26 4.17
2165 2597 5.648960 ACATCAATACATCATGCAGAACACA 59.351 36.000 0.00 0.00 0.00 3.72
2168 2600 9.177304 CATTTACATCAATACATCATGCAGAAC 57.823 33.333 0.00 0.00 0.00 3.01
2174 2606 8.019094 ACGATGCATTTACATCAATACATCATG 58.981 33.333 0.00 0.00 45.56 3.07
2178 2610 9.585099 AAAAACGATGCATTTACATCAATACAT 57.415 25.926 0.00 0.00 45.56 2.29
2194 2626 5.925907 ACCATGCAAAAATAAAAACGATGC 58.074 33.333 0.00 0.00 0.00 3.91
2220 2652 0.955428 CCACGACATTCCAGGGTGTG 60.955 60.000 3.40 0.00 0.00 3.82
2223 2655 1.002773 GTAACCACGACATTCCAGGGT 59.997 52.381 0.00 0.00 0.00 4.34
2236 2668 8.419076 AAAAGTTGAAATGTTCATGTAACCAC 57.581 30.769 0.00 0.00 39.84 4.16
2276 2708 9.855021 GTGTGCATTACTTAAACCATAAAAGAT 57.145 29.630 0.00 0.00 0.00 2.40
2277 2709 8.851145 TGTGTGCATTACTTAAACCATAAAAGA 58.149 29.630 0.00 0.00 0.00 2.52
2278 2710 9.469807 TTGTGTGCATTACTTAAACCATAAAAG 57.530 29.630 0.00 0.00 0.00 2.27
2279 2711 9.988815 ATTGTGTGCATTACTTAAACCATAAAA 57.011 25.926 0.00 0.00 0.00 1.52
2280 2712 9.988815 AATTGTGTGCATTACTTAAACCATAAA 57.011 25.926 0.00 0.00 0.00 1.40
2281 2713 9.988815 AAATTGTGTGCATTACTTAAACCATAA 57.011 25.926 0.00 0.00 0.00 1.90
2283 2715 9.418045 GTAAATTGTGTGCATTACTTAAACCAT 57.582 29.630 0.00 0.00 0.00 3.55
2284 2716 8.634444 AGTAAATTGTGTGCATTACTTAAACCA 58.366 29.630 2.94 0.00 35.62 3.67
2289 2721 9.938280 AGACTAGTAAATTGTGTGCATTACTTA 57.062 29.630 12.10 0.00 38.92 2.24
2290 2722 8.848474 AGACTAGTAAATTGTGTGCATTACTT 57.152 30.769 12.10 0.00 38.92 2.24
2291 2723 8.094548 TGAGACTAGTAAATTGTGTGCATTACT 58.905 33.333 11.68 11.68 40.59 2.24
2292 2724 8.169268 GTGAGACTAGTAAATTGTGTGCATTAC 58.831 37.037 0.00 0.00 0.00 1.89
2293 2725 7.875554 TGTGAGACTAGTAAATTGTGTGCATTA 59.124 33.333 0.00 0.00 0.00 1.90
2294 2726 6.710295 TGTGAGACTAGTAAATTGTGTGCATT 59.290 34.615 0.00 0.00 0.00 3.56
2295 2727 6.230472 TGTGAGACTAGTAAATTGTGTGCAT 58.770 36.000 0.00 0.00 0.00 3.96
2296 2728 5.606505 TGTGAGACTAGTAAATTGTGTGCA 58.393 37.500 0.00 0.00 0.00 4.57
2297 2729 6.537566 CATGTGAGACTAGTAAATTGTGTGC 58.462 40.000 0.00 0.00 0.00 4.57
2298 2730 6.147656 TGCATGTGAGACTAGTAAATTGTGTG 59.852 38.462 0.00 0.00 0.00 3.82
2299 2731 6.230472 TGCATGTGAGACTAGTAAATTGTGT 58.770 36.000 0.00 0.00 0.00 3.72
2300 2732 6.726258 TGCATGTGAGACTAGTAAATTGTG 57.274 37.500 0.00 0.00 0.00 3.33
2301 2733 7.928307 AATGCATGTGAGACTAGTAAATTGT 57.072 32.000 0.00 0.00 0.00 2.71
2302 2734 8.453320 TCAAATGCATGTGAGACTAGTAAATTG 58.547 33.333 15.88 3.08 0.00 2.32
2303 2735 8.565896 TCAAATGCATGTGAGACTAGTAAATT 57.434 30.769 15.88 0.00 0.00 1.82
2304 2736 8.565896 TTCAAATGCATGTGAGACTAGTAAAT 57.434 30.769 18.80 0.00 0.00 1.40
2305 2737 7.977789 TTCAAATGCATGTGAGACTAGTAAA 57.022 32.000 18.80 0.00 0.00 2.01
2306 2738 9.665719 TTATTCAAATGCATGTGAGACTAGTAA 57.334 29.630 18.80 10.00 0.00 2.24
2307 2739 9.665719 TTTATTCAAATGCATGTGAGACTAGTA 57.334 29.630 18.80 3.76 0.00 1.82
2308 2740 8.565896 TTTATTCAAATGCATGTGAGACTAGT 57.434 30.769 18.80 0.00 0.00 2.57
2309 2741 9.844790 TTTTTATTCAAATGCATGTGAGACTAG 57.155 29.630 18.80 0.00 0.00 2.57
2310 2742 9.624697 GTTTTTATTCAAATGCATGTGAGACTA 57.375 29.630 18.80 9.96 0.00 2.59
2311 2743 8.362639 AGTTTTTATTCAAATGCATGTGAGACT 58.637 29.630 18.80 13.45 0.00 3.24
2312 2744 8.524870 AGTTTTTATTCAAATGCATGTGAGAC 57.475 30.769 18.80 11.77 0.00 3.36
2317 2749 9.533253 GGCTATAGTTTTTATTCAAATGCATGT 57.467 29.630 0.00 0.00 0.00 3.21
2318 2750 9.531942 TGGCTATAGTTTTTATTCAAATGCATG 57.468 29.630 0.00 0.00 0.00 4.06
2402 2834 5.763204 GGGTTAGAACTTCACTTGAATGTGA 59.237 40.000 0.00 0.00 44.17 3.58
2403 2835 5.334105 CGGGTTAGAACTTCACTTGAATGTG 60.334 44.000 0.00 0.00 39.15 3.21
2404 2836 4.755123 CGGGTTAGAACTTCACTTGAATGT 59.245 41.667 0.00 0.00 33.01 2.71
2405 2837 4.755123 ACGGGTTAGAACTTCACTTGAATG 59.245 41.667 0.00 0.00 33.01 2.67
2406 2838 4.969484 ACGGGTTAGAACTTCACTTGAAT 58.031 39.130 0.00 0.00 33.01 2.57
2407 2839 4.411256 ACGGGTTAGAACTTCACTTGAA 57.589 40.909 0.00 0.00 0.00 2.69
2408 2840 5.733620 ATACGGGTTAGAACTTCACTTGA 57.266 39.130 0.00 0.00 0.00 3.02
2409 2841 6.796705 AAATACGGGTTAGAACTTCACTTG 57.203 37.500 0.00 0.00 0.00 3.16
2410 2842 7.222161 AGAAAATACGGGTTAGAACTTCACTT 58.778 34.615 0.00 0.00 0.00 3.16
2411 2843 6.766429 AGAAAATACGGGTTAGAACTTCACT 58.234 36.000 0.00 0.00 0.00 3.41
2412 2844 7.172019 TCAAGAAAATACGGGTTAGAACTTCAC 59.828 37.037 0.00 0.00 0.00 3.18
2413 2845 7.172019 GTCAAGAAAATACGGGTTAGAACTTCA 59.828 37.037 0.00 0.00 0.00 3.02
2414 2846 7.360691 GGTCAAGAAAATACGGGTTAGAACTTC 60.361 40.741 0.00 0.00 0.00 3.01
2415 2847 6.429078 GGTCAAGAAAATACGGGTTAGAACTT 59.571 38.462 0.00 0.00 0.00 2.66
2416 2848 5.936372 GGTCAAGAAAATACGGGTTAGAACT 59.064 40.000 0.00 0.00 0.00 3.01
2417 2849 5.936372 AGGTCAAGAAAATACGGGTTAGAAC 59.064 40.000 0.00 0.00 0.00 3.01
2418 2850 6.117975 AGGTCAAGAAAATACGGGTTAGAA 57.882 37.500 0.00 0.00 0.00 2.10
2419 2851 5.246656 TGAGGTCAAGAAAATACGGGTTAGA 59.753 40.000 0.00 0.00 0.00 2.10
2420 2852 5.484715 TGAGGTCAAGAAAATACGGGTTAG 58.515 41.667 0.00 0.00 0.00 2.34
2421 2853 5.486735 TGAGGTCAAGAAAATACGGGTTA 57.513 39.130 0.00 0.00 0.00 2.85
2422 2854 4.360951 TGAGGTCAAGAAAATACGGGTT 57.639 40.909 0.00 0.00 0.00 4.11
2423 2855 4.360951 TTGAGGTCAAGAAAATACGGGT 57.639 40.909 0.00 0.00 0.00 5.28
2424 2856 4.941263 TCATTGAGGTCAAGAAAATACGGG 59.059 41.667 0.00 0.00 39.47 5.28
2425 2857 6.316140 TGATCATTGAGGTCAAGAAAATACGG 59.684 38.462 0.00 0.00 39.47 4.02
2426 2858 7.307493 TGATCATTGAGGTCAAGAAAATACG 57.693 36.000 0.00 0.00 39.47 3.06
2427 2859 9.565213 CTTTGATCATTGAGGTCAAGAAAATAC 57.435 33.333 0.00 0.00 39.47 1.89
2428 2860 9.519191 TCTTTGATCATTGAGGTCAAGAAAATA 57.481 29.630 0.00 0.00 39.47 1.40
2429 2861 8.413309 TCTTTGATCATTGAGGTCAAGAAAAT 57.587 30.769 0.00 0.00 39.47 1.82
2430 2862 7.822161 TCTTTGATCATTGAGGTCAAGAAAA 57.178 32.000 0.00 0.00 39.47 2.29
2431 2863 7.822161 TTCTTTGATCATTGAGGTCAAGAAA 57.178 32.000 10.90 4.23 39.47 2.52
2432 2864 7.822161 TTTCTTTGATCATTGAGGTCAAGAA 57.178 32.000 9.73 9.73 39.47 2.52
2433 2865 8.301720 CAATTTCTTTGATCATTGAGGTCAAGA 58.698 33.333 0.00 0.00 37.06 3.02
2434 2866 8.086522 ACAATTTCTTTGATCATTGAGGTCAAG 58.913 33.333 10.62 2.94 37.75 3.02
2435 2867 7.954835 ACAATTTCTTTGATCATTGAGGTCAA 58.045 30.769 10.62 0.00 38.76 3.18
2436 2868 7.528996 ACAATTTCTTTGATCATTGAGGTCA 57.471 32.000 10.62 0.00 38.76 4.02
2437 2869 8.084073 TCAACAATTTCTTTGATCATTGAGGTC 58.916 33.333 10.62 0.00 38.76 3.85
2438 2870 7.954835 TCAACAATTTCTTTGATCATTGAGGT 58.045 30.769 10.62 1.82 38.76 3.85
2439 2871 8.821147 TTCAACAATTTCTTTGATCATTGAGG 57.179 30.769 10.62 3.68 38.76 3.86
2442 2874 9.325150 GCATTTCAACAATTTCTTTGATCATTG 57.675 29.630 0.00 0.00 38.76 2.82
2443 2875 9.058174 TGCATTTCAACAATTTCTTTGATCATT 57.942 25.926 0.00 0.00 38.76 2.57
2444 2876 8.610248 TGCATTTCAACAATTTCTTTGATCAT 57.390 26.923 0.00 0.00 38.76 2.45
2445 2877 8.499967 CATGCATTTCAACAATTTCTTTGATCA 58.500 29.630 0.00 0.00 38.76 2.92
2446 2878 8.500773 ACATGCATTTCAACAATTTCTTTGATC 58.499 29.630 0.00 0.00 38.76 2.92
2447 2879 8.286800 CACATGCATTTCAACAATTTCTTTGAT 58.713 29.630 0.00 0.00 38.76 2.57
2448 2880 7.494952 TCACATGCATTTCAACAATTTCTTTGA 59.505 29.630 0.00 0.00 38.76 2.69
2449 2881 7.631822 TCACATGCATTTCAACAATTTCTTTG 58.368 30.769 0.00 0.00 41.36 2.77
2450 2882 7.789273 TCACATGCATTTCAACAATTTCTTT 57.211 28.000 0.00 0.00 0.00 2.52
2451 2883 7.972832 ATCACATGCATTTCAACAATTTCTT 57.027 28.000 0.00 0.00 0.00 2.52
2452 2884 8.308931 AGTATCACATGCATTTCAACAATTTCT 58.691 29.630 0.00 0.00 0.00 2.52
2453 2885 8.470040 AGTATCACATGCATTTCAACAATTTC 57.530 30.769 0.00 0.00 0.00 2.17
2454 2886 8.836268 AAGTATCACATGCATTTCAACAATTT 57.164 26.923 0.00 0.00 0.00 1.82
2461 2893 9.183368 TGGTTTATAAGTATCACATGCATTTCA 57.817 29.630 0.00 0.00 0.00 2.69
2463 2895 9.801873 GTTGGTTTATAAGTATCACATGCATTT 57.198 29.630 0.00 0.00 0.00 2.32
2464 2896 8.965819 TGTTGGTTTATAAGTATCACATGCATT 58.034 29.630 0.00 0.00 0.00 3.56
2465 2897 8.518430 TGTTGGTTTATAAGTATCACATGCAT 57.482 30.769 0.00 0.00 0.00 3.96
2466 2898 7.929941 TGTTGGTTTATAAGTATCACATGCA 57.070 32.000 0.00 0.00 0.00 3.96
2472 2904 9.111613 CGGGTTTATGTTGGTTTATAAGTATCA 57.888 33.333 0.00 0.00 0.00 2.15
2473 2905 9.328845 TCGGGTTTATGTTGGTTTATAAGTATC 57.671 33.333 0.00 0.00 0.00 2.24
2474 2906 9.856162 ATCGGGTTTATGTTGGTTTATAAGTAT 57.144 29.630 0.00 0.00 0.00 2.12
2475 2907 9.328845 GATCGGGTTTATGTTGGTTTATAAGTA 57.671 33.333 0.00 0.00 0.00 2.24
2476 2908 7.011669 CGATCGGGTTTATGTTGGTTTATAAGT 59.988 37.037 7.38 0.00 0.00 2.24
2477 2909 7.349711 CGATCGGGTTTATGTTGGTTTATAAG 58.650 38.462 7.38 0.00 0.00 1.73
2478 2910 6.260493 CCGATCGGGTTTATGTTGGTTTATAA 59.740 38.462 26.95 0.00 0.00 0.98
2479 2911 5.759273 CCGATCGGGTTTATGTTGGTTTATA 59.241 40.000 26.95 0.00 0.00 0.98
2480 2912 4.577283 CCGATCGGGTTTATGTTGGTTTAT 59.423 41.667 26.95 0.00 0.00 1.40
2481 2913 3.940221 CCGATCGGGTTTATGTTGGTTTA 59.060 43.478 26.95 0.00 0.00 2.01
2482 2914 2.750712 CCGATCGGGTTTATGTTGGTTT 59.249 45.455 26.95 0.00 0.00 3.27
2483 2915 2.027007 TCCGATCGGGTTTATGTTGGTT 60.027 45.455 32.79 0.00 37.00 3.67
2484 2916 1.555992 TCCGATCGGGTTTATGTTGGT 59.444 47.619 32.79 0.00 37.00 3.67
2485 2917 2.319136 TCCGATCGGGTTTATGTTGG 57.681 50.000 32.79 3.74 37.00 3.77
2486 2918 5.994887 TTTATCCGATCGGGTTTATGTTG 57.005 39.130 32.79 4.29 37.00 3.33
2487 2919 6.544564 ACATTTTATCCGATCGGGTTTATGTT 59.455 34.615 32.79 16.01 37.00 2.71
2488 2920 6.059484 ACATTTTATCCGATCGGGTTTATGT 58.941 36.000 32.79 27.69 37.00 2.29
2489 2921 6.203915 TGACATTTTATCCGATCGGGTTTATG 59.796 38.462 32.79 27.12 37.00 1.90
2490 2922 6.292923 TGACATTTTATCCGATCGGGTTTAT 58.707 36.000 32.79 20.99 37.00 1.40
2491 2923 5.672503 TGACATTTTATCCGATCGGGTTTA 58.327 37.500 32.79 19.02 37.00 2.01
2492 2924 4.519213 TGACATTTTATCCGATCGGGTTT 58.481 39.130 32.79 20.01 37.00 3.27
2493 2925 4.145365 TGACATTTTATCCGATCGGGTT 57.855 40.909 32.79 22.42 37.00 4.11
2494 2926 3.830744 TGACATTTTATCCGATCGGGT 57.169 42.857 32.79 29.42 37.00 5.28
2495 2927 4.065088 ACATGACATTTTATCCGATCGGG 58.935 43.478 32.79 17.55 35.59 5.14
2496 2928 4.991056 AGACATGACATTTTATCCGATCGG 59.009 41.667 28.62 28.62 0.00 4.18
2497 2929 6.530913 AAGACATGACATTTTATCCGATCG 57.469 37.500 8.51 8.51 0.00 3.69
2498 2930 8.283291 GGTAAAGACATGACATTTTATCCGATC 58.717 37.037 0.00 0.00 0.00 3.69
2499 2931 7.773224 TGGTAAAGACATGACATTTTATCCGAT 59.227 33.333 0.00 0.00 0.00 4.18
2500 2932 7.106890 TGGTAAAGACATGACATTTTATCCGA 58.893 34.615 0.00 0.00 0.00 4.55
2501 2933 7.315247 TGGTAAAGACATGACATTTTATCCG 57.685 36.000 0.00 0.00 0.00 4.18
2507 2939 9.071276 GGATCATATGGTAAAGACATGACATTT 57.929 33.333 0.00 0.00 0.00 2.32
2508 2940 8.219868 TGGATCATATGGTAAAGACATGACATT 58.780 33.333 0.00 0.00 0.00 2.71
2509 2941 7.663081 GTGGATCATATGGTAAAGACATGACAT 59.337 37.037 0.00 0.00 0.00 3.06
2510 2942 6.992123 GTGGATCATATGGTAAAGACATGACA 59.008 38.462 0.00 0.00 0.00 3.58
2511 2943 6.428159 GGTGGATCATATGGTAAAGACATGAC 59.572 42.308 0.00 0.00 0.00 3.06
2512 2944 6.329986 AGGTGGATCATATGGTAAAGACATGA 59.670 38.462 0.00 0.00 0.00 3.07
2513 2945 6.537355 AGGTGGATCATATGGTAAAGACATG 58.463 40.000 2.13 0.00 0.00 3.21
2514 2946 6.329986 TGAGGTGGATCATATGGTAAAGACAT 59.670 38.462 2.13 0.00 0.00 3.06
2515 2947 5.665360 TGAGGTGGATCATATGGTAAAGACA 59.335 40.000 2.13 0.00 0.00 3.41
2516 2948 6.174720 TGAGGTGGATCATATGGTAAAGAC 57.825 41.667 2.13 0.00 0.00 3.01
2517 2949 6.183361 CCTTGAGGTGGATCATATGGTAAAGA 60.183 42.308 2.13 0.00 0.00 2.52
2518 2950 6.000219 CCTTGAGGTGGATCATATGGTAAAG 59.000 44.000 2.13 0.00 0.00 1.85
2519 2951 5.669904 TCCTTGAGGTGGATCATATGGTAAA 59.330 40.000 2.13 0.00 36.34 2.01
2520 2952 5.223655 TCCTTGAGGTGGATCATATGGTAA 58.776 41.667 2.13 0.00 36.34 2.85
2521 2953 4.826616 TCCTTGAGGTGGATCATATGGTA 58.173 43.478 2.13 0.00 36.34 3.25
2522 2954 3.668821 TCCTTGAGGTGGATCATATGGT 58.331 45.455 2.13 0.00 36.34 3.55
2523 2955 4.141413 TGTTCCTTGAGGTGGATCATATGG 60.141 45.833 2.13 0.00 36.34 2.74
2524 2956 4.818546 GTGTTCCTTGAGGTGGATCATATG 59.181 45.833 0.00 0.00 36.21 1.78
2525 2957 4.141390 GGTGTTCCTTGAGGTGGATCATAT 60.141 45.833 0.00 0.00 36.21 1.78
2526 2958 3.199946 GGTGTTCCTTGAGGTGGATCATA 59.800 47.826 0.00 0.00 36.21 2.15
2527 2959 2.025887 GGTGTTCCTTGAGGTGGATCAT 60.026 50.000 0.00 0.00 36.21 2.45
2528 2960 1.351017 GGTGTTCCTTGAGGTGGATCA 59.649 52.381 0.00 0.00 36.34 2.92
2529 2961 1.351017 TGGTGTTCCTTGAGGTGGATC 59.649 52.381 0.00 0.00 36.34 3.36
2530 2962 1.444933 TGGTGTTCCTTGAGGTGGAT 58.555 50.000 0.00 0.00 36.34 3.41
2531 2963 1.217916 TTGGTGTTCCTTGAGGTGGA 58.782 50.000 0.00 0.00 36.34 4.02
2532 2964 2.292828 ATTGGTGTTCCTTGAGGTGG 57.707 50.000 0.00 0.00 36.34 4.61
2533 2965 4.827284 ACTAAATTGGTGTTCCTTGAGGTG 59.173 41.667 0.00 0.00 36.34 4.00
2534 2966 5.061721 ACTAAATTGGTGTTCCTTGAGGT 57.938 39.130 0.00 0.00 36.34 3.85
2535 2967 5.316987 AGACTAAATTGGTGTTCCTTGAGG 58.683 41.667 0.00 0.00 34.23 3.86
2536 2968 5.120830 CGAGACTAAATTGGTGTTCCTTGAG 59.879 44.000 0.00 0.00 34.23 3.02
2537 2969 4.994852 CGAGACTAAATTGGTGTTCCTTGA 59.005 41.667 0.00 0.00 34.23 3.02
2538 2970 4.755123 ACGAGACTAAATTGGTGTTCCTTG 59.245 41.667 0.00 0.00 34.23 3.61
2539 2971 4.969484 ACGAGACTAAATTGGTGTTCCTT 58.031 39.130 0.00 0.00 34.23 3.36
2540 2972 4.618920 ACGAGACTAAATTGGTGTTCCT 57.381 40.909 0.00 0.00 34.23 3.36
2541 2973 5.008316 ACAAACGAGACTAAATTGGTGTTCC 59.992 40.000 0.00 0.00 0.00 3.62
2542 2974 6.056428 ACAAACGAGACTAAATTGGTGTTC 57.944 37.500 0.00 0.00 0.00 3.18
2543 2975 6.445357 AACAAACGAGACTAAATTGGTGTT 57.555 33.333 0.00 0.00 0.00 3.32
2544 2976 6.445357 AAACAAACGAGACTAAATTGGTGT 57.555 33.333 0.00 0.00 0.00 4.16
2545 2977 9.113876 GAATAAACAAACGAGACTAAATTGGTG 57.886 33.333 0.00 0.00 0.00 4.17
2546 2978 9.063615 AGAATAAACAAACGAGACTAAATTGGT 57.936 29.630 0.00 0.00 0.00 3.67
2606 3038 9.103861 TGCACGTATTTGATCATTATAAGTTCA 57.896 29.630 0.00 4.76 0.00 3.18
2607 3039 9.929722 TTGCACGTATTTGATCATTATAAGTTC 57.070 29.630 0.00 2.35 0.00 3.01
2614 3046 9.502145 GAGAAAATTGCACGTATTTGATCATTA 57.498 29.630 0.00 0.00 0.00 1.90
2615 3047 8.028354 TGAGAAAATTGCACGTATTTGATCATT 58.972 29.630 0.00 0.00 0.00 2.57
2616 3048 7.537715 TGAGAAAATTGCACGTATTTGATCAT 58.462 30.769 0.00 0.00 0.00 2.45
2617 3049 6.907741 TGAGAAAATTGCACGTATTTGATCA 58.092 32.000 0.00 0.00 0.00 2.92
2618 3050 7.795431 TTGAGAAAATTGCACGTATTTGATC 57.205 32.000 0.00 0.00 0.00 2.92
2619 3051 8.487176 GTTTTGAGAAAATTGCACGTATTTGAT 58.513 29.630 0.00 0.00 32.22 2.57
2620 3052 7.704472 AGTTTTGAGAAAATTGCACGTATTTGA 59.296 29.630 0.00 0.00 32.22 2.69
2621 3053 7.788846 CAGTTTTGAGAAAATTGCACGTATTTG 59.211 33.333 0.00 0.00 32.56 2.32
2622 3054 7.704472 TCAGTTTTGAGAAAATTGCACGTATTT 59.296 29.630 0.00 0.00 37.82 1.40
2623 3055 7.199766 TCAGTTTTGAGAAAATTGCACGTATT 58.800 30.769 0.00 0.00 37.82 1.89
2624 3056 6.734137 TCAGTTTTGAGAAAATTGCACGTAT 58.266 32.000 0.00 0.00 37.82 3.06
2625 3057 6.125327 TCAGTTTTGAGAAAATTGCACGTA 57.875 33.333 0.00 0.00 37.82 3.57
2626 3058 4.992688 TCAGTTTTGAGAAAATTGCACGT 58.007 34.783 0.00 0.00 37.82 4.49
2627 3059 6.198778 TCAATCAGTTTTGAGAAAATTGCACG 59.801 34.615 0.00 0.00 37.82 5.34
2628 3060 7.467557 TCAATCAGTTTTGAGAAAATTGCAC 57.532 32.000 0.00 0.00 37.82 4.57
2629 3061 8.665643 AATCAATCAGTTTTGAGAAAATTGCA 57.334 26.923 0.00 0.00 38.90 4.08
2718 3150 8.536175 GCCTTCTCCTATTAGTGAGCTTATATT 58.464 37.037 0.00 0.00 0.00 1.28
2719 3151 7.125053 GGCCTTCTCCTATTAGTGAGCTTATAT 59.875 40.741 0.00 0.00 0.00 0.86
2720 3152 6.437793 GGCCTTCTCCTATTAGTGAGCTTATA 59.562 42.308 0.00 0.00 0.00 0.98
2721 3153 5.247337 GGCCTTCTCCTATTAGTGAGCTTAT 59.753 44.000 0.00 0.00 0.00 1.73
2722 3154 4.589374 GGCCTTCTCCTATTAGTGAGCTTA 59.411 45.833 0.00 0.00 0.00 3.09
2723 3155 3.389656 GGCCTTCTCCTATTAGTGAGCTT 59.610 47.826 0.00 0.00 0.00 3.74
2724 3156 2.969262 GGCCTTCTCCTATTAGTGAGCT 59.031 50.000 0.00 0.00 0.00 4.09
2725 3157 2.700897 TGGCCTTCTCCTATTAGTGAGC 59.299 50.000 3.32 0.00 0.00 4.26
2726 3158 5.559148 ATTGGCCTTCTCCTATTAGTGAG 57.441 43.478 3.32 3.92 0.00 3.51
2727 3159 5.975988 AATTGGCCTTCTCCTATTAGTGA 57.024 39.130 3.32 0.00 31.47 3.41
2728 3160 5.300286 CCAAATTGGCCTTCTCCTATTAGTG 59.700 44.000 3.32 0.00 32.62 2.74
2729 3161 5.449553 CCAAATTGGCCTTCTCCTATTAGT 58.550 41.667 3.32 0.00 32.62 2.24
2744 3176 4.455906 GCCCGGCAGCCAAATTGG 62.456 66.667 13.30 7.84 41.55 3.16
2745 3177 3.360956 GAGCCCGGCAGCCAAATTG 62.361 63.158 13.30 0.00 0.00 2.32
2746 3178 3.070576 GAGCCCGGCAGCCAAATT 61.071 61.111 13.30 0.00 0.00 1.82
2747 3179 4.365111 TGAGCCCGGCAGCCAAAT 62.365 61.111 13.30 0.00 0.00 2.32
2827 3259 9.689976 CACATCAAATTATCTACCACACAAAAA 57.310 29.630 0.00 0.00 0.00 1.94
2828 3260 8.855110 ACACATCAAATTATCTACCACACAAAA 58.145 29.630 0.00 0.00 0.00 2.44
2829 3261 8.296000 CACACATCAAATTATCTACCACACAAA 58.704 33.333 0.00 0.00 0.00 2.83
2830 3262 7.663493 TCACACATCAAATTATCTACCACACAA 59.337 33.333 0.00 0.00 0.00 3.33
2831 3263 7.164803 TCACACATCAAATTATCTACCACACA 58.835 34.615 0.00 0.00 0.00 3.72
2832 3264 7.201644 CCTCACACATCAAATTATCTACCACAC 60.202 40.741 0.00 0.00 0.00 3.82
2833 3265 6.823182 CCTCACACATCAAATTATCTACCACA 59.177 38.462 0.00 0.00 0.00 4.17
2834 3266 6.823689 ACCTCACACATCAAATTATCTACCAC 59.176 38.462 0.00 0.00 0.00 4.16
2835 3267 6.957631 ACCTCACACATCAAATTATCTACCA 58.042 36.000 0.00 0.00 0.00 3.25
2836 3268 7.254455 CGAACCTCACACATCAAATTATCTACC 60.254 40.741 0.00 0.00 0.00 3.18
2837 3269 7.621991 CGAACCTCACACATCAAATTATCTAC 58.378 38.462 0.00 0.00 0.00 2.59
2838 3270 6.257849 GCGAACCTCACACATCAAATTATCTA 59.742 38.462 0.00 0.00 0.00 1.98
2839 3271 5.065218 GCGAACCTCACACATCAAATTATCT 59.935 40.000 0.00 0.00 0.00 1.98
2840 3272 5.065218 AGCGAACCTCACACATCAAATTATC 59.935 40.000 0.00 0.00 0.00 1.75
2841 3273 4.943705 AGCGAACCTCACACATCAAATTAT 59.056 37.500 0.00 0.00 0.00 1.28
2842 3274 4.154015 CAGCGAACCTCACACATCAAATTA 59.846 41.667 0.00 0.00 0.00 1.40
2843 3275 3.058016 CAGCGAACCTCACACATCAAATT 60.058 43.478 0.00 0.00 0.00 1.82
2844 3276 2.485426 CAGCGAACCTCACACATCAAAT 59.515 45.455 0.00 0.00 0.00 2.32
2845 3277 1.872952 CAGCGAACCTCACACATCAAA 59.127 47.619 0.00 0.00 0.00 2.69
2846 3278 1.511850 CAGCGAACCTCACACATCAA 58.488 50.000 0.00 0.00 0.00 2.57
2847 3279 0.950555 GCAGCGAACCTCACACATCA 60.951 55.000 0.00 0.00 0.00 3.07
2848 3280 0.950555 TGCAGCGAACCTCACACATC 60.951 55.000 0.00 0.00 0.00 3.06
2849 3281 0.534877 TTGCAGCGAACCTCACACAT 60.535 50.000 0.00 0.00 0.00 3.21
2850 3282 0.746204 TTTGCAGCGAACCTCACACA 60.746 50.000 0.00 0.00 0.00 3.72
2851 3283 0.380378 TTTTGCAGCGAACCTCACAC 59.620 50.000 0.00 0.00 0.00 3.82
2852 3284 1.317613 ATTTTGCAGCGAACCTCACA 58.682 45.000 0.00 0.00 0.00 3.58
2853 3285 2.287547 TGAATTTTGCAGCGAACCTCAC 60.288 45.455 0.00 0.00 0.00 3.51
2854 3286 1.952990 TGAATTTTGCAGCGAACCTCA 59.047 42.857 0.00 0.00 0.00 3.86
2855 3287 2.704725 TGAATTTTGCAGCGAACCTC 57.295 45.000 0.00 0.00 0.00 3.85
2856 3288 2.362077 AGTTGAATTTTGCAGCGAACCT 59.638 40.909 0.00 0.00 0.00 3.50
2857 3289 2.726241 GAGTTGAATTTTGCAGCGAACC 59.274 45.455 0.00 0.00 0.00 3.62
2858 3290 3.371168 TGAGTTGAATTTTGCAGCGAAC 58.629 40.909 0.00 0.00 0.00 3.95
2859 3291 3.706802 TGAGTTGAATTTTGCAGCGAA 57.293 38.095 0.00 0.00 0.00 4.70
2860 3292 3.921119 ATGAGTTGAATTTTGCAGCGA 57.079 38.095 0.00 0.00 0.00 4.93
2861 3293 4.376615 CCAAATGAGTTGAATTTTGCAGCG 60.377 41.667 0.00 0.00 39.87 5.18
2862 3294 4.751098 TCCAAATGAGTTGAATTTTGCAGC 59.249 37.500 0.00 0.00 39.87 5.25
2863 3295 5.754406 TGTCCAAATGAGTTGAATTTTGCAG 59.246 36.000 0.00 0.00 39.87 4.41
2864 3296 5.668471 TGTCCAAATGAGTTGAATTTTGCA 58.332 33.333 0.00 0.00 39.87 4.08
2865 3297 6.790285 ATGTCCAAATGAGTTGAATTTTGC 57.210 33.333 0.00 0.00 39.87 3.68
2866 3298 8.828644 TCAAATGTCCAAATGAGTTGAATTTTG 58.171 29.630 0.00 0.06 39.87 2.44
2867 3299 8.961294 TCAAATGTCCAAATGAGTTGAATTTT 57.039 26.923 0.00 0.00 39.87 1.82
2868 3300 7.172019 GCTCAAATGTCCAAATGAGTTGAATTT 59.828 33.333 0.00 0.00 41.03 1.82
2869 3301 6.647895 GCTCAAATGTCCAAATGAGTTGAATT 59.352 34.615 0.00 0.00 41.03 2.17
2870 3302 6.161381 GCTCAAATGTCCAAATGAGTTGAAT 58.839 36.000 0.00 0.00 41.03 2.57
2871 3303 5.509501 GGCTCAAATGTCCAAATGAGTTGAA 60.510 40.000 0.00 0.00 41.03 2.69
2872 3304 4.022068 GGCTCAAATGTCCAAATGAGTTGA 60.022 41.667 0.00 0.00 41.03 3.18
2873 3305 4.021719 AGGCTCAAATGTCCAAATGAGTTG 60.022 41.667 11.79 0.00 41.03 3.16
2874 3306 4.154942 AGGCTCAAATGTCCAAATGAGTT 58.845 39.130 11.79 2.52 41.03 3.01
2875 3307 3.760684 GAGGCTCAAATGTCCAAATGAGT 59.239 43.478 10.25 0.00 41.03 3.41
2876 3308 4.015084 AGAGGCTCAAATGTCCAAATGAG 58.985 43.478 18.26 7.82 41.69 2.90
2877 3309 4.012374 GAGAGGCTCAAATGTCCAAATGA 58.988 43.478 18.26 0.00 0.00 2.57
2878 3310 4.015084 AGAGAGGCTCAAATGTCCAAATG 58.985 43.478 18.26 0.00 32.06 2.32
2879 3311 4.268359 GAGAGAGGCTCAAATGTCCAAAT 58.732 43.478 18.26 0.00 43.38 2.32
2880 3312 3.679389 GAGAGAGGCTCAAATGTCCAAA 58.321 45.455 18.26 0.00 43.38 3.28
2881 3313 2.354103 CGAGAGAGGCTCAAATGTCCAA 60.354 50.000 18.26 0.00 44.15 3.53
2882 3314 1.205655 CGAGAGAGGCTCAAATGTCCA 59.794 52.381 18.26 0.00 44.15 4.02
2883 3315 1.472376 CCGAGAGAGGCTCAAATGTCC 60.472 57.143 18.26 0.00 44.15 4.02
2884 3316 1.933247 CCGAGAGAGGCTCAAATGTC 58.067 55.000 18.26 4.87 44.15 3.06
2906 3338 3.958147 ACAGACCCCGATTTTGTCTTTTT 59.042 39.130 0.00 0.00 37.25 1.94
2907 3339 3.562182 ACAGACCCCGATTTTGTCTTTT 58.438 40.909 0.00 0.00 37.25 2.27
2908 3340 3.223674 ACAGACCCCGATTTTGTCTTT 57.776 42.857 0.00 0.00 37.25 2.52
2909 3341 2.951229 ACAGACCCCGATTTTGTCTT 57.049 45.000 0.00 0.00 37.25 3.01
2910 3342 4.360951 TTTACAGACCCCGATTTTGTCT 57.639 40.909 0.00 0.00 39.86 3.41
2911 3343 5.441709 TTTTTACAGACCCCGATTTTGTC 57.558 39.130 0.00 0.00 0.00 3.18
2930 3362 9.705290 AAACAGTTCATGAACAGTAAACTTTTT 57.295 25.926 33.92 20.33 43.47 1.94
2931 3363 9.705290 AAAACAGTTCATGAACAGTAAACTTTT 57.295 25.926 33.92 24.90 43.47 2.27
2932 3364 9.139174 CAAAACAGTTCATGAACAGTAAACTTT 57.861 29.630 33.92 25.19 43.47 2.66
2933 3365 8.519526 TCAAAACAGTTCATGAACAGTAAACTT 58.480 29.630 33.92 21.81 43.47 2.66
2934 3366 7.968405 GTCAAAACAGTTCATGAACAGTAAACT 59.032 33.333 33.92 17.91 43.47 2.66
2935 3367 7.220108 GGTCAAAACAGTTCATGAACAGTAAAC 59.780 37.037 33.92 25.01 43.47 2.01
2936 3368 7.254852 GGTCAAAACAGTTCATGAACAGTAAA 58.745 34.615 33.92 17.98 43.47 2.01
2937 3369 6.183360 GGGTCAAAACAGTTCATGAACAGTAA 60.183 38.462 33.92 18.26 43.47 2.24
2938 3370 5.298276 GGGTCAAAACAGTTCATGAACAGTA 59.702 40.000 33.92 17.91 43.47 2.74
2939 3371 4.097892 GGGTCAAAACAGTTCATGAACAGT 59.902 41.667 33.92 29.88 43.47 3.55
2940 3372 4.610945 GGGTCAAAACAGTTCATGAACAG 58.389 43.478 33.92 29.27 43.47 3.16
2941 3373 3.066064 CGGGTCAAAACAGTTCATGAACA 59.934 43.478 33.92 13.78 43.47 3.18
2942 3374 3.314080 TCGGGTCAAAACAGTTCATGAAC 59.686 43.478 27.69 27.69 41.45 3.18
2943 3375 3.546724 TCGGGTCAAAACAGTTCATGAA 58.453 40.909 3.38 3.38 0.00 2.57
2944 3376 3.201353 TCGGGTCAAAACAGTTCATGA 57.799 42.857 0.00 0.00 0.00 3.07
2945 3377 4.503741 AATCGGGTCAAAACAGTTCATG 57.496 40.909 0.00 0.00 0.00 3.07
2946 3378 4.340950 ACAAATCGGGTCAAAACAGTTCAT 59.659 37.500 0.00 0.00 0.00 2.57
2947 3379 3.697045 ACAAATCGGGTCAAAACAGTTCA 59.303 39.130 0.00 0.00 0.00 3.18
2948 3380 4.036380 AGACAAATCGGGTCAAAACAGTTC 59.964 41.667 0.00 0.00 37.74 3.01
2949 3381 3.951680 AGACAAATCGGGTCAAAACAGTT 59.048 39.130 0.00 0.00 37.74 3.16
2950 3382 3.551846 AGACAAATCGGGTCAAAACAGT 58.448 40.909 0.00 0.00 37.74 3.55
2951 3383 4.568152 AAGACAAATCGGGTCAAAACAG 57.432 40.909 0.00 0.00 37.74 3.16
2952 3384 4.993029 AAAGACAAATCGGGTCAAAACA 57.007 36.364 0.00 0.00 37.74 2.83
2972 3404 0.534877 TGAGCAGCTCTCGGCAAAAA 60.535 50.000 23.15 0.00 44.86 1.94
2973 3405 0.534877 TTGAGCAGCTCTCGGCAAAA 60.535 50.000 23.15 4.52 44.86 2.44
2974 3406 0.534877 TTTGAGCAGCTCTCGGCAAA 60.535 50.000 23.15 12.39 44.86 3.68
2975 3407 0.321919 ATTTGAGCAGCTCTCGGCAA 60.322 50.000 23.15 6.67 44.86 4.52
2976 3408 0.536724 TATTTGAGCAGCTCTCGGCA 59.463 50.000 23.15 0.00 44.86 5.69
2977 3409 1.797635 GATATTTGAGCAGCTCTCGGC 59.202 52.381 23.15 4.64 44.86 5.54
2978 3410 2.224137 TGGATATTTGAGCAGCTCTCGG 60.224 50.000 23.15 0.00 44.86 4.63
2979 3411 3.103447 TGGATATTTGAGCAGCTCTCG 57.897 47.619 23.15 0.00 44.86 4.04
2980 3412 5.530171 TCATTTGGATATTTGAGCAGCTCTC 59.470 40.000 23.15 11.57 42.23 3.20
2981 3413 5.443283 TCATTTGGATATTTGAGCAGCTCT 58.557 37.500 23.15 5.93 0.00 4.09
2982 3414 5.298777 ACTCATTTGGATATTTGAGCAGCTC 59.701 40.000 16.21 16.21 39.33 4.09
2983 3415 5.198965 ACTCATTTGGATATTTGAGCAGCT 58.801 37.500 0.00 0.00 39.33 4.24
2984 3416 5.511234 ACTCATTTGGATATTTGAGCAGC 57.489 39.130 0.00 0.00 39.33 5.25
2985 3417 7.092137 TCAACTCATTTGGATATTTGAGCAG 57.908 36.000 0.00 0.00 39.33 4.24
2986 3418 7.465353 TTCAACTCATTTGGATATTTGAGCA 57.535 32.000 0.00 0.00 39.33 4.26
2987 3419 8.937634 ATTTCAACTCATTTGGATATTTGAGC 57.062 30.769 0.00 0.00 39.33 4.26
2990 3422 9.763465 GCAAATTTCAACTCATTTGGATATTTG 57.237 29.630 0.00 0.00 39.71 2.32
2991 3423 9.504708 TGCAAATTTCAACTCATTTGGATATTT 57.495 25.926 6.72 0.00 39.71 1.40
2992 3424 9.158233 CTGCAAATTTCAACTCATTTGGATATT 57.842 29.630 6.72 0.00 39.22 1.28
2993 3425 7.279313 GCTGCAAATTTCAACTCATTTGGATAT 59.721 33.333 0.00 0.00 39.22 1.63
2994 3426 6.591062 GCTGCAAATTTCAACTCATTTGGATA 59.409 34.615 0.00 0.00 39.22 2.59
2995 3427 5.410439 GCTGCAAATTTCAACTCATTTGGAT 59.590 36.000 0.00 0.00 39.22 3.41
2996 3428 4.751098 GCTGCAAATTTCAACTCATTTGGA 59.249 37.500 0.00 3.40 39.71 3.53
2997 3429 4.376615 CGCTGCAAATTTCAACTCATTTGG 60.377 41.667 0.00 0.00 39.71 3.28
2998 3430 4.376615 CCGCTGCAAATTTCAACTCATTTG 60.377 41.667 0.00 0.00 41.47 2.32
2999 3431 3.742369 CCGCTGCAAATTTCAACTCATTT 59.258 39.130 0.00 0.00 0.00 2.32
3000 3432 3.243839 ACCGCTGCAAATTTCAACTCATT 60.244 39.130 0.00 0.00 0.00 2.57
3001 3433 2.297033 ACCGCTGCAAATTTCAACTCAT 59.703 40.909 0.00 0.00 0.00 2.90
3002 3434 1.680735 ACCGCTGCAAATTTCAACTCA 59.319 42.857 0.00 0.00 0.00 3.41
3003 3435 2.422276 ACCGCTGCAAATTTCAACTC 57.578 45.000 0.00 0.00 0.00 3.01
3004 3436 2.884639 AGTACCGCTGCAAATTTCAACT 59.115 40.909 0.00 0.00 0.00 3.16
3005 3437 3.234386 GAGTACCGCTGCAAATTTCAAC 58.766 45.455 0.00 0.00 0.00 3.18
3006 3438 2.881513 TGAGTACCGCTGCAAATTTCAA 59.118 40.909 0.00 0.00 0.00 2.69
3007 3439 2.225491 GTGAGTACCGCTGCAAATTTCA 59.775 45.455 0.00 0.00 0.00 2.69
3008 3440 2.724839 CGTGAGTACCGCTGCAAATTTC 60.725 50.000 0.00 0.00 0.00 2.17
3009 3441 1.196808 CGTGAGTACCGCTGCAAATTT 59.803 47.619 0.00 0.00 0.00 1.82
3010 3442 0.796312 CGTGAGTACCGCTGCAAATT 59.204 50.000 0.00 0.00 0.00 1.82
3011 3443 2.456000 CGTGAGTACCGCTGCAAAT 58.544 52.632 0.00 0.00 0.00 2.32
3012 3444 3.945436 CGTGAGTACCGCTGCAAA 58.055 55.556 0.00 0.00 0.00 3.68
3019 3451 2.961522 AATTTGTTGCGTGAGTACCG 57.038 45.000 0.00 0.00 0.00 4.02
3020 3452 5.796350 AGATAATTTGTTGCGTGAGTACC 57.204 39.130 0.00 0.00 0.00 3.34
3021 3453 7.521509 AGTAGATAATTTGTTGCGTGAGTAC 57.478 36.000 0.00 0.00 0.00 2.73
3022 3454 9.642327 TTTAGTAGATAATTTGTTGCGTGAGTA 57.358 29.630 0.00 0.00 0.00 2.59
3023 3455 8.440833 GTTTAGTAGATAATTTGTTGCGTGAGT 58.559 33.333 0.00 0.00 0.00 3.41
3024 3456 8.440059 TGTTTAGTAGATAATTTGTTGCGTGAG 58.560 33.333 0.00 0.00 0.00 3.51
3025 3457 8.312896 TGTTTAGTAGATAATTTGTTGCGTGA 57.687 30.769 0.00 0.00 0.00 4.35
3026 3458 8.942669 TTGTTTAGTAGATAATTTGTTGCGTG 57.057 30.769 0.00 0.00 0.00 5.34
3027 3459 9.953697 TTTTGTTTAGTAGATAATTTGTTGCGT 57.046 25.926 0.00 0.00 0.00 5.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.