Multiple sequence alignment - TraesCS7B01G381600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G381600 chr7B 100.000 5401 0 0 1 5401 647003412 646998012 0.000000e+00 9974.0
1 TraesCS7B01G381600 chr7B 97.750 800 16 2 3 801 2781082 2780284 0.000000e+00 1376.0
2 TraesCS7B01G381600 chr7D 93.175 2784 107 35 2123 4887 580319036 580316317 0.000000e+00 4012.0
3 TraesCS7B01G381600 chr7D 88.836 1263 72 26 853 2097 580320239 580319028 0.000000e+00 1487.0
4 TraesCS7B01G381600 chr7D 85.025 394 39 9 4941 5316 578817969 578817578 3.050000e-102 383.0
5 TraesCS7B01G381600 chr7D 89.091 110 10 1 694 801 3099876 3099767 9.440000e-28 135.0
6 TraesCS7B01G381600 chr7A 92.554 2095 95 34 2883 4938 671927569 671925497 0.000000e+00 2948.0
7 TraesCS7B01G381600 chr7A 91.383 1555 82 14 853 2385 671929090 671927566 0.000000e+00 2082.0
8 TraesCS7B01G381600 chr7A 81.961 571 62 19 1139 1686 205894017 205894569 3.840000e-121 446.0
9 TraesCS7B01G381600 chr7A 78.930 617 89 21 196 802 728033704 728033119 1.100000e-101 381.0
10 TraesCS7B01G381600 chr7A 90.323 124 11 1 2764 2886 263726422 263726299 1.560000e-35 161.0
11 TraesCS7B01G381600 chr5B 94.598 796 21 4 6 801 509927581 509926808 0.000000e+00 1212.0
12 TraesCS7B01G381600 chr5B 85.950 484 39 7 1213 1686 598668129 598668593 1.750000e-134 490.0
13 TraesCS7B01G381600 chr5B 86.353 425 34 4 1272 1686 36581911 36581501 4.960000e-120 442.0
14 TraesCS7B01G381600 chr5B 80.217 460 67 20 113 559 161118350 161117902 1.880000e-84 324.0
15 TraesCS7B01G381600 chr5B 96.154 52 2 0 803 854 584122142 584122091 9.640000e-13 86.1
16 TraesCS7B01G381600 chr5B 95.652 46 0 1 2236 2279 455765091 455765136 7.500000e-09 73.1
17 TraesCS7B01G381600 chr3B 92.418 765 16 10 3 767 147711562 147710840 0.000000e+00 1053.0
18 TraesCS7B01G381600 chr3B 96.724 580 18 1 3 582 728280433 728281011 0.000000e+00 965.0
19 TraesCS7B01G381600 chr3B 84.478 393 40 10 4942 5319 398956885 398956499 8.550000e-98 368.0
20 TraesCS7B01G381600 chr3B 87.342 316 38 1 2380 2695 139885878 139885565 1.430000e-95 361.0
21 TraesCS7B01G381600 chr3B 87.308 260 30 3 2382 2639 750327191 750326933 1.470000e-75 294.0
22 TraesCS7B01G381600 chr3B 89.177 231 20 4 4942 5172 592691632 592691857 3.180000e-72 283.0
23 TraesCS7B01G381600 chr3B 86.454 251 33 1 2386 2636 771762332 771762581 1.920000e-69 274.0
24 TraesCS7B01G381600 chr3B 91.667 132 11 0 2752 2883 203696140 203696271 3.320000e-42 183.0
25 TraesCS7B01G381600 chr4D 89.591 807 67 17 6 805 450312598 450313394 0.000000e+00 1009.0
26 TraesCS7B01G381600 chr1D 87.550 755 61 27 60 801 346402661 346401927 0.000000e+00 843.0
27 TraesCS7B01G381600 chr1D 87.540 313 35 4 2384 2694 454656047 454656357 5.140000e-95 359.0
28 TraesCS7B01G381600 chr1D 83.291 395 47 7 4940 5319 481702277 481701887 4.000000e-91 346.0
29 TraesCS7B01G381600 chr1D 91.406 128 10 1 2757 2883 467608843 467608970 2.000000e-39 174.0
30 TraesCS7B01G381600 chr1B 86.364 484 37 5 1213 1686 626335352 626334888 8.080000e-138 501.0
31 TraesCS7B01G381600 chr1B 90.756 119 11 0 2769 2887 176757748 176757630 5.600000e-35 159.0
32 TraesCS7B01G381600 chr5A 87.589 419 28 7 1278 1686 101312535 101312131 1.060000e-126 464.0
33 TraesCS7B01G381600 chr5A 80.407 393 55 13 4942 5316 94758908 94758520 4.120000e-71 279.0
34 TraesCS7B01G381600 chr5A 80.101 397 60 18 240 627 43393340 43392954 1.480000e-70 278.0
35 TraesCS7B01G381600 chr5A 88.889 135 14 1 2750 2883 546783606 546783472 1.200000e-36 165.0
36 TraesCS7B01G381600 chr1A 86.824 425 32 6 1272 1686 74241428 74241838 2.290000e-123 453.0
37 TraesCS7B01G381600 chr1A 88.889 117 9 2 1209 1325 2154346 2154458 2.030000e-29 141.0
38 TraesCS7B01G381600 chr1A 95.556 45 1 1 1209 1253 74241345 74241388 2.700000e-08 71.3
39 TraesCS7B01G381600 chrUn 86.588 425 30 8 1272 1686 767663 767256 1.380000e-120 444.0
40 TraesCS7B01G381600 chrUn 86.588 425 30 8 1272 1686 71269583 71269990 1.380000e-120 444.0
41 TraesCS7B01G381600 chrUn 86.588 425 30 8 1272 1686 370169578 370169171 1.380000e-120 444.0
42 TraesCS7B01G381600 chr2B 86.353 425 34 4 1272 1686 6907670 6907260 4.960000e-120 442.0
43 TraesCS7B01G381600 chr2B 86.118 425 35 4 1272 1686 6820199 6819789 2.310000e-118 436.0
44 TraesCS7B01G381600 chr2B 80.000 290 40 9 4956 5230 708319947 708319661 1.190000e-46 198.0
45 TraesCS7B01G381600 chr4B 79.468 677 96 32 139 801 420426804 420427451 1.790000e-119 440.0
46 TraesCS7B01G381600 chr4B 88.608 79 5 3 2199 2274 100937593 100937670 5.760000e-15 93.5
47 TraesCS7B01G381600 chr3D 79.598 647 101 22 163 797 24754790 24754163 8.310000e-118 435.0
48 TraesCS7B01G381600 chr3D 85.390 397 32 12 4942 5316 108431296 108431688 6.560000e-104 388.0
49 TraesCS7B01G381600 chr3D 87.261 314 30 4 2382 2694 155712246 155712550 3.100000e-92 350.0
50 TraesCS7B01G381600 chr3D 80.856 397 49 12 4941 5316 92206431 92206821 2.460000e-73 287.0
51 TraesCS7B01G381600 chr5D 85.213 399 41 7 4933 5319 277135530 277135138 1.410000e-105 394.0
52 TraesCS7B01G381600 chr5D 85.242 393 40 9 4942 5317 515004069 515004460 6.560000e-104 388.0
53 TraesCS7B01G381600 chr5D 91.342 231 18 2 4942 5172 353008887 353008659 1.130000e-81 315.0
54 TraesCS7B01G381600 chr5D 91.111 135 11 1 2750 2883 8545403 8545537 1.200000e-41 182.0
55 TraesCS7B01G381600 chr5D 76.676 373 52 11 4965 5319 74715427 74715072 2.000000e-39 174.0
56 TraesCS7B01G381600 chr5D 88.406 138 15 1 2750 2886 447827022 447827159 1.200000e-36 165.0
57 TraesCS7B01G381600 chr5D 96.154 52 2 0 803 854 476706053 476706002 9.640000e-13 86.1
58 TraesCS7B01G381600 chr6A 83.632 391 44 7 4941 5316 460450421 460450806 3.100000e-92 350.0
59 TraesCS7B01G381600 chr6A 90.234 256 23 1 2384 2639 333958699 333958446 3.120000e-87 333.0
60 TraesCS7B01G381600 chr6D 92.050 239 19 0 2384 2622 48088298 48088536 2.410000e-88 337.0
61 TraesCS7B01G381600 chr6D 90.726 248 22 1 2384 2630 243450779 243451026 4.030000e-86 329.0
62 TraesCS7B01G381600 chr6D 78.841 397 61 13 4942 5319 179945741 179946133 4.180000e-61 246.0
63 TraesCS7B01G381600 chr6B 90.196 255 20 4 548 801 129861660 129861410 1.450000e-85 327.0
64 TraesCS7B01G381600 chr6B 76.777 633 101 28 134 758 565052523 565053117 4.060000e-81 313.0
65 TraesCS7B01G381600 chr3A 81.687 415 56 9 4929 5325 37835700 37835288 1.450000e-85 327.0
66 TraesCS7B01G381600 chr3A 79.284 391 56 16 4926 5297 571905480 571905864 3.230000e-62 250.0
67 TraesCS7B01G381600 chr2D 88.608 237 23 4 4941 5176 261989258 261989025 8.850000e-73 285.0
68 TraesCS7B01G381600 chr2D 92.174 115 9 0 2769 2883 2598912 2599026 4.330000e-36 163.0
69 TraesCS7B01G381600 chr2A 91.150 113 5 1 1213 1325 139067376 139067483 1.210000e-31 148.0
70 TraesCS7B01G381600 chr2A 89.381 113 8 1 1213 1325 716709538 716709430 7.290000e-29 139.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G381600 chr7B 646998012 647003412 5400 True 9974.0 9974 100.0000 1 5401 1 chr7B.!!$R2 5400
1 TraesCS7B01G381600 chr7B 2780284 2781082 798 True 1376.0 1376 97.7500 3 801 1 chr7B.!!$R1 798
2 TraesCS7B01G381600 chr7D 580316317 580320239 3922 True 2749.5 4012 91.0055 853 4887 2 chr7D.!!$R3 4034
3 TraesCS7B01G381600 chr7A 671925497 671929090 3593 True 2515.0 2948 91.9685 853 4938 2 chr7A.!!$R3 4085
4 TraesCS7B01G381600 chr7A 205894017 205894569 552 False 446.0 446 81.9610 1139 1686 1 chr7A.!!$F1 547
5 TraesCS7B01G381600 chr7A 728033119 728033704 585 True 381.0 381 78.9300 196 802 1 chr7A.!!$R2 606
6 TraesCS7B01G381600 chr5B 509926808 509927581 773 True 1212.0 1212 94.5980 6 801 1 chr5B.!!$R3 795
7 TraesCS7B01G381600 chr3B 147710840 147711562 722 True 1053.0 1053 92.4180 3 767 1 chr3B.!!$R2 764
8 TraesCS7B01G381600 chr3B 728280433 728281011 578 False 965.0 965 96.7240 3 582 1 chr3B.!!$F3 579
9 TraesCS7B01G381600 chr4D 450312598 450313394 796 False 1009.0 1009 89.5910 6 805 1 chr4D.!!$F1 799
10 TraesCS7B01G381600 chr1D 346401927 346402661 734 True 843.0 843 87.5500 60 801 1 chr1D.!!$R1 741
11 TraesCS7B01G381600 chr4B 420426804 420427451 647 False 440.0 440 79.4680 139 801 1 chr4B.!!$F2 662
12 TraesCS7B01G381600 chr3D 24754163 24754790 627 True 435.0 435 79.5980 163 797 1 chr3D.!!$R1 634
13 TraesCS7B01G381600 chr6B 565052523 565053117 594 False 313.0 313 76.7770 134 758 1 chr6B.!!$F1 624

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
849 1117 0.533308 TCAACTCCAAACCGAACGGG 60.533 55.0 17.44 1.19 43.62 5.28 F
1409 1756 0.109532 TTCCACCGATTCTGTTGGCA 59.890 50.0 0.00 0.00 34.32 4.92 F
1610 1957 0.179004 TTTGGTGTTGCAGGTCGGAT 60.179 50.0 0.00 0.00 0.00 4.18 F
2097 2448 0.317160 TAGCACCGTCACTTGTCCAG 59.683 55.0 0.00 0.00 0.00 3.86 F
2100 2451 0.321671 CACCGTCACTTGTCCAGGAT 59.678 55.0 0.00 0.00 0.00 3.24 F
2102 2453 0.608130 CCGTCACTTGTCCAGGATCA 59.392 55.0 0.00 0.00 0.00 2.92 F
3691 4087 0.694771 TTCCTCTTGTGCTGCAGGAT 59.305 50.0 17.12 0.00 32.58 3.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2574 2962 0.526662 CCAGTTTCGTAGGAGCGAGT 59.473 55.000 0.00 0.0 42.10 4.18 R
2645 3033 1.062148 GCTTCGTATTTGGTCGCTTCC 59.938 52.381 0.00 0.0 0.00 3.46 R
3448 3843 1.092348 GTCCCCTTTACACGCAATCC 58.908 55.000 0.00 0.0 0.00 3.01 R
3691 4087 2.257207 CTAAGTCTGGTCCCAAGTCCA 58.743 52.381 0.00 0.0 0.00 4.02 R
3963 4373 6.183360 GGATGAAGGTTGGTAAGAACACAAAA 60.183 38.462 0.00 0.0 0.00 2.44 R
4170 4581 3.247648 CAGCACTGTACTGTTTGTGTACC 59.752 47.826 2.16 0.0 39.42 3.34 R
5360 5791 0.039617 TGCTTCCAAAAACCGCATCG 60.040 50.000 0.00 0.0 0.00 3.84 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
435 698 9.936759 TCAAACTCACTAACTTTTTCCAATTTT 57.063 25.926 0.00 0.00 0.00 1.82
437 700 9.936759 AAACTCACTAACTTTTTCCAATTTTCA 57.063 25.926 0.00 0.00 0.00 2.69
805 1073 2.398588 CCAACTAGGAGCTCCCATGTA 58.601 52.381 29.54 13.88 41.22 2.29
806 1074 2.975489 CCAACTAGGAGCTCCCATGTAT 59.025 50.000 29.54 12.24 41.22 2.29
807 1075 3.007398 CCAACTAGGAGCTCCCATGTATC 59.993 52.174 29.54 1.26 41.22 2.24
808 1076 2.896039 ACTAGGAGCTCCCATGTATCC 58.104 52.381 29.54 1.36 37.41 2.59
809 1077 2.452823 ACTAGGAGCTCCCATGTATCCT 59.547 50.000 29.54 9.89 42.89 3.24
810 1078 2.022718 AGGAGCTCCCATGTATCCTC 57.977 55.000 29.54 0.00 35.44 3.71
811 1079 1.221523 AGGAGCTCCCATGTATCCTCA 59.778 52.381 29.54 0.00 35.44 3.86
812 1080 1.622811 GGAGCTCCCATGTATCCTCAG 59.377 57.143 23.19 0.00 34.14 3.35
813 1081 1.001860 GAGCTCCCATGTATCCTCAGC 59.998 57.143 0.87 0.00 0.00 4.26
814 1082 0.761187 GCTCCCATGTATCCTCAGCA 59.239 55.000 0.00 0.00 0.00 4.41
815 1083 1.141657 GCTCCCATGTATCCTCAGCAA 59.858 52.381 0.00 0.00 0.00 3.91
816 1084 2.224719 GCTCCCATGTATCCTCAGCAAT 60.225 50.000 0.00 0.00 0.00 3.56
817 1085 3.749954 GCTCCCATGTATCCTCAGCAATT 60.750 47.826 0.00 0.00 0.00 2.32
818 1086 4.070716 CTCCCATGTATCCTCAGCAATTC 58.929 47.826 0.00 0.00 0.00 2.17
819 1087 3.152341 CCCATGTATCCTCAGCAATTCC 58.848 50.000 0.00 0.00 0.00 3.01
820 1088 3.181436 CCCATGTATCCTCAGCAATTCCT 60.181 47.826 0.00 0.00 0.00 3.36
821 1089 3.819337 CCATGTATCCTCAGCAATTCCTG 59.181 47.826 0.00 0.00 0.00 3.86
822 1090 4.458397 CATGTATCCTCAGCAATTCCTGT 58.542 43.478 0.00 0.00 34.47 4.00
823 1091 3.877559 TGTATCCTCAGCAATTCCTGTG 58.122 45.455 0.00 0.00 34.47 3.66
824 1092 2.431954 ATCCTCAGCAATTCCTGTGG 57.568 50.000 10.69 10.69 44.11 4.17
825 1093 1.067295 TCCTCAGCAATTCCTGTGGT 58.933 50.000 15.42 0.00 43.53 4.16
826 1094 1.425066 TCCTCAGCAATTCCTGTGGTT 59.575 47.619 15.42 0.00 43.53 3.67
827 1095 2.158475 TCCTCAGCAATTCCTGTGGTTT 60.158 45.455 15.42 0.00 43.53 3.27
828 1096 2.229784 CCTCAGCAATTCCTGTGGTTTC 59.770 50.000 9.01 0.00 40.11 2.78
829 1097 3.152341 CTCAGCAATTCCTGTGGTTTCT 58.848 45.455 0.00 0.00 34.47 2.52
830 1098 3.565307 TCAGCAATTCCTGTGGTTTCTT 58.435 40.909 0.00 0.00 34.47 2.52
831 1099 3.569701 TCAGCAATTCCTGTGGTTTCTTC 59.430 43.478 0.00 0.00 34.47 2.87
832 1100 3.318839 CAGCAATTCCTGTGGTTTCTTCA 59.681 43.478 0.00 0.00 0.00 3.02
833 1101 3.960102 AGCAATTCCTGTGGTTTCTTCAA 59.040 39.130 0.00 0.00 0.00 2.69
834 1102 4.051237 GCAATTCCTGTGGTTTCTTCAAC 58.949 43.478 0.00 0.00 34.18 3.18
835 1103 4.202151 GCAATTCCTGTGGTTTCTTCAACT 60.202 41.667 0.00 0.00 35.46 3.16
836 1104 5.523369 CAATTCCTGTGGTTTCTTCAACTC 58.477 41.667 0.00 0.00 35.46 3.01
837 1105 3.208747 TCCTGTGGTTTCTTCAACTCC 57.791 47.619 0.00 0.00 35.46 3.85
838 1106 2.507886 TCCTGTGGTTTCTTCAACTCCA 59.492 45.455 0.00 0.00 35.46 3.86
839 1107 3.053991 TCCTGTGGTTTCTTCAACTCCAA 60.054 43.478 0.00 0.00 35.46 3.53
840 1108 3.699038 CCTGTGGTTTCTTCAACTCCAAA 59.301 43.478 0.00 0.00 35.46 3.28
841 1109 4.440112 CCTGTGGTTTCTTCAACTCCAAAC 60.440 45.833 0.00 0.00 35.46 2.93
842 1110 3.445805 TGTGGTTTCTTCAACTCCAAACC 59.554 43.478 5.62 5.62 45.50 3.27
843 1111 3.349488 GGTTTCTTCAACTCCAAACCG 57.651 47.619 0.00 0.00 38.72 4.44
844 1112 2.946990 GGTTTCTTCAACTCCAAACCGA 59.053 45.455 0.00 0.00 38.72 4.69
845 1113 3.379057 GGTTTCTTCAACTCCAAACCGAA 59.621 43.478 0.00 0.00 38.72 4.30
846 1114 4.348656 GTTTCTTCAACTCCAAACCGAAC 58.651 43.478 0.00 0.00 31.92 3.95
847 1115 2.206750 TCTTCAACTCCAAACCGAACG 58.793 47.619 0.00 0.00 0.00 3.95
848 1116 1.263217 CTTCAACTCCAAACCGAACGG 59.737 52.381 11.83 11.83 42.03 4.44
849 1117 0.533308 TCAACTCCAAACCGAACGGG 60.533 55.000 17.44 1.19 43.62 5.28
850 1118 1.228033 AACTCCAAACCGAACGGGG 60.228 57.895 17.44 9.12 41.60 5.73
851 1119 3.053896 CTCCAAACCGAACGGGGC 61.054 66.667 17.44 0.00 41.60 5.80
914 1182 1.736645 CGCATTCGGCCCGTATAGG 60.737 63.158 1.63 0.00 40.31 2.57
924 1193 2.113860 CCCGTATAGGCCCATTCATG 57.886 55.000 0.00 0.00 39.21 3.07
951 1227 2.364579 CCGTACCCACCCAGGCTA 60.365 66.667 0.00 0.00 35.39 3.93
952 1228 1.764854 CCGTACCCACCCAGGCTAT 60.765 63.158 0.00 0.00 35.39 2.97
967 1243 4.892934 CCAGGCTATTATACAAGGGCAAAA 59.107 41.667 0.00 0.00 0.00 2.44
1117 1402 2.760385 CCCACCTCCGTCCCTCTC 60.760 72.222 0.00 0.00 0.00 3.20
1118 1403 2.760385 CCACCTCCGTCCCTCTCC 60.760 72.222 0.00 0.00 0.00 3.71
1206 1494 2.436115 CCCGAAACGCCTCCTTCC 60.436 66.667 0.00 0.00 0.00 3.46
1207 1495 2.436115 CCGAAACGCCTCCTTCCC 60.436 66.667 0.00 0.00 0.00 3.97
1208 1496 2.436115 CGAAACGCCTCCTTCCCC 60.436 66.667 0.00 0.00 0.00 4.81
1209 1497 2.045242 GAAACGCCTCCTTCCCCC 60.045 66.667 0.00 0.00 0.00 5.40
1210 1498 2.856988 AAACGCCTCCTTCCCCCA 60.857 61.111 0.00 0.00 0.00 4.96
1211 1499 2.420466 GAAACGCCTCCTTCCCCCAA 62.420 60.000 0.00 0.00 0.00 4.12
1387 1734 2.498726 CTCCCTTCTCGCTCCAGC 59.501 66.667 0.00 0.00 37.78 4.85
1388 1735 2.038007 TCCCTTCTCGCTCCAGCT 59.962 61.111 0.00 0.00 39.32 4.24
1389 1736 1.610673 TCCCTTCTCGCTCCAGCTT 60.611 57.895 0.00 0.00 39.32 3.74
1390 1737 1.194781 TCCCTTCTCGCTCCAGCTTT 61.195 55.000 0.00 0.00 39.32 3.51
1391 1738 0.322008 CCCTTCTCGCTCCAGCTTTT 60.322 55.000 0.00 0.00 39.32 2.27
1392 1739 1.082690 CCTTCTCGCTCCAGCTTTTC 58.917 55.000 0.00 0.00 39.32 2.29
1393 1740 1.082690 CTTCTCGCTCCAGCTTTTCC 58.917 55.000 0.00 0.00 39.32 3.13
1394 1741 0.396435 TTCTCGCTCCAGCTTTTCCA 59.604 50.000 0.00 0.00 39.32 3.53
1395 1742 0.320771 TCTCGCTCCAGCTTTTCCAC 60.321 55.000 0.00 0.00 39.32 4.02
1396 1743 1.301677 CTCGCTCCAGCTTTTCCACC 61.302 60.000 0.00 0.00 39.32 4.61
1397 1744 2.680913 CGCTCCAGCTTTTCCACCG 61.681 63.158 0.00 0.00 39.32 4.94
1398 1745 1.302511 GCTCCAGCTTTTCCACCGA 60.303 57.895 0.00 0.00 38.21 4.69
1399 1746 0.678048 GCTCCAGCTTTTCCACCGAT 60.678 55.000 0.00 0.00 38.21 4.18
1400 1747 1.826385 CTCCAGCTTTTCCACCGATT 58.174 50.000 0.00 0.00 0.00 3.34
1401 1748 1.740025 CTCCAGCTTTTCCACCGATTC 59.260 52.381 0.00 0.00 0.00 2.52
1402 1749 1.351017 TCCAGCTTTTCCACCGATTCT 59.649 47.619 0.00 0.00 0.00 2.40
1403 1750 1.470098 CCAGCTTTTCCACCGATTCTG 59.530 52.381 0.00 0.00 0.00 3.02
1404 1751 2.154462 CAGCTTTTCCACCGATTCTGT 58.846 47.619 0.00 0.00 0.00 3.41
1405 1752 2.554032 CAGCTTTTCCACCGATTCTGTT 59.446 45.455 0.00 0.00 0.00 3.16
1406 1753 2.554032 AGCTTTTCCACCGATTCTGTTG 59.446 45.455 0.00 0.00 0.00 3.33
1407 1754 2.351738 GCTTTTCCACCGATTCTGTTGG 60.352 50.000 0.00 0.00 37.40 3.77
1408 1755 1.243902 TTTCCACCGATTCTGTTGGC 58.756 50.000 0.00 0.00 34.32 4.52
1409 1756 0.109532 TTCCACCGATTCTGTTGGCA 59.890 50.000 0.00 0.00 34.32 4.92
1410 1757 0.605319 TCCACCGATTCTGTTGGCAC 60.605 55.000 0.00 0.00 34.32 5.01
1585 1932 7.281324 GTGAGTGACTAGAGAGAGCTACAATTA 59.719 40.741 0.00 0.00 0.00 1.40
1609 1956 1.098712 GTTTGGTGTTGCAGGTCGGA 61.099 55.000 0.00 0.00 0.00 4.55
1610 1957 0.179004 TTTGGTGTTGCAGGTCGGAT 60.179 50.000 0.00 0.00 0.00 4.18
1703 2050 1.527311 GGTAAGCGATCGGATTTCAGC 59.473 52.381 18.30 0.00 0.00 4.26
1730 2077 4.514441 GCTGTAATGTTCATCTGCTAGCAT 59.486 41.667 19.72 0.28 0.00 3.79
1779 2126 9.328845 GTTTGGATATGAATGGTAAATTTGCAT 57.671 29.630 8.59 0.00 0.00 3.96
1784 2131 9.188588 GATATGAATGGTAAATTTGCATGAGTG 57.811 33.333 8.59 0.00 0.00 3.51
1785 2132 6.343716 TGAATGGTAAATTTGCATGAGTGT 57.656 33.333 8.59 0.00 0.00 3.55
1849 2196 2.570752 AGATCACTGCATCACACTCCTT 59.429 45.455 0.00 0.00 0.00 3.36
1881 2228 3.305094 CGTCAAGTTGTGTCACGTAAACT 59.695 43.478 2.11 0.06 34.40 2.66
1882 2229 4.574759 GTCAAGTTGTGTCACGTAAACTG 58.425 43.478 7.69 4.02 33.30 3.16
1897 2244 5.131890 CGTAAACTGCGACGTTTGAAATTA 58.868 37.500 11.31 0.00 37.63 1.40
1898 2245 5.616383 CGTAAACTGCGACGTTTGAAATTAA 59.384 36.000 11.31 0.00 37.63 1.40
1962 2309 5.227569 TGAAGCCTTAAGTTGTGATCTCA 57.772 39.130 0.97 0.00 0.00 3.27
2042 2390 3.817084 TCACTCAGAGCCACATTTTCTTG 59.183 43.478 0.00 0.00 0.00 3.02
2091 2442 5.548406 AGAATTAAGTTAGCACCGTCACTT 58.452 37.500 0.00 0.00 33.95 3.16
2092 2443 5.408604 AGAATTAAGTTAGCACCGTCACTTG 59.591 40.000 0.00 0.00 31.83 3.16
2093 2444 2.614829 AAGTTAGCACCGTCACTTGT 57.385 45.000 0.00 0.00 0.00 3.16
2094 2445 2.150397 AGTTAGCACCGTCACTTGTC 57.850 50.000 0.00 0.00 0.00 3.18
2095 2446 1.145803 GTTAGCACCGTCACTTGTCC 58.854 55.000 0.00 0.00 0.00 4.02
2096 2447 0.753867 TTAGCACCGTCACTTGTCCA 59.246 50.000 0.00 0.00 0.00 4.02
2097 2448 0.317160 TAGCACCGTCACTTGTCCAG 59.683 55.000 0.00 0.00 0.00 3.86
2098 2449 1.961277 GCACCGTCACTTGTCCAGG 60.961 63.158 0.00 0.00 0.00 4.45
2099 2450 1.745890 CACCGTCACTTGTCCAGGA 59.254 57.895 0.00 0.00 0.00 3.86
2100 2451 0.321671 CACCGTCACTTGTCCAGGAT 59.678 55.000 0.00 0.00 0.00 3.24
2101 2452 0.608640 ACCGTCACTTGTCCAGGATC 59.391 55.000 0.00 0.00 0.00 3.36
2102 2453 0.608130 CCGTCACTTGTCCAGGATCA 59.392 55.000 0.00 0.00 0.00 2.92
2103 2454 1.208052 CCGTCACTTGTCCAGGATCAT 59.792 52.381 0.00 0.00 0.00 2.45
2104 2455 2.355108 CCGTCACTTGTCCAGGATCATT 60.355 50.000 0.00 0.00 0.00 2.57
2105 2456 2.674852 CGTCACTTGTCCAGGATCATTG 59.325 50.000 0.00 0.00 0.00 2.82
2106 2457 3.679389 GTCACTTGTCCAGGATCATTGT 58.321 45.455 0.00 0.00 0.00 2.71
2107 2458 4.620567 CGTCACTTGTCCAGGATCATTGTA 60.621 45.833 0.00 0.00 0.00 2.41
2108 2459 5.245531 GTCACTTGTCCAGGATCATTGTAA 58.754 41.667 0.00 0.00 0.00 2.41
2109 2460 5.705441 GTCACTTGTCCAGGATCATTGTAAA 59.295 40.000 0.00 0.00 0.00 2.01
2110 2461 6.206634 GTCACTTGTCCAGGATCATTGTAAAA 59.793 38.462 0.00 0.00 0.00 1.52
2111 2462 6.430925 TCACTTGTCCAGGATCATTGTAAAAG 59.569 38.462 0.00 0.00 0.00 2.27
2112 2463 6.207417 CACTTGTCCAGGATCATTGTAAAAGT 59.793 38.462 0.00 0.00 0.00 2.66
2113 2464 6.777580 ACTTGTCCAGGATCATTGTAAAAGTT 59.222 34.615 0.00 0.00 0.00 2.66
2114 2465 6.573664 TGTCCAGGATCATTGTAAAAGTTG 57.426 37.500 0.00 0.00 0.00 3.16
2115 2466 5.048083 TGTCCAGGATCATTGTAAAAGTTGC 60.048 40.000 0.00 0.00 0.00 4.17
2116 2467 5.183904 GTCCAGGATCATTGTAAAAGTTGCT 59.816 40.000 0.00 0.00 0.00 3.91
2117 2468 5.774690 TCCAGGATCATTGTAAAAGTTGCTT 59.225 36.000 0.00 0.00 0.00 3.91
2118 2469 6.071952 TCCAGGATCATTGTAAAAGTTGCTTC 60.072 38.462 0.00 0.00 0.00 3.86
2119 2470 6.294675 CCAGGATCATTGTAAAAGTTGCTTCA 60.295 38.462 0.00 0.00 0.00 3.02
2120 2471 7.318141 CAGGATCATTGTAAAAGTTGCTTCAT 58.682 34.615 0.00 0.00 0.00 2.57
2121 2472 8.461222 CAGGATCATTGTAAAAGTTGCTTCATA 58.539 33.333 0.00 0.00 0.00 2.15
2122 2473 9.023962 AGGATCATTGTAAAAGTTGCTTCATAA 57.976 29.630 0.00 0.00 0.00 1.90
2123 2474 9.076596 GGATCATTGTAAAAGTTGCTTCATAAC 57.923 33.333 0.00 0.00 0.00 1.89
2124 2475 9.846248 GATCATTGTAAAAGTTGCTTCATAACT 57.154 29.630 0.00 0.00 39.92 2.24
2156 2542 6.926272 CAGTTAGTTGGATATTCTGTAGGCTC 59.074 42.308 0.00 0.00 0.00 4.70
2265 2651 8.553459 AACTCCTTAATTAATATGATGAGGCG 57.447 34.615 0.00 0.00 0.00 5.52
2338 2726 4.640771 AGTTGTGATGTGGTCATAAGGT 57.359 40.909 0.00 0.00 38.42 3.50
2491 2879 2.747855 GGCCGAACAGAGCCCTTG 60.748 66.667 0.00 0.00 43.76 3.61
2554 2942 3.367910 CCAAGTCTTCTTCTTCCTCTCGG 60.368 52.174 0.00 0.00 0.00 4.63
2800 3188 5.289434 CGTAGTTGTTTACGGGTTCTATTCC 59.711 44.000 0.00 0.00 41.93 3.01
2813 3201 4.155462 GGTTCTATTCCGGTCACTTTTTCC 59.845 45.833 0.00 0.00 0.00 3.13
2978 3366 5.625568 AGTTGTACTCTGTTAGGTTGGTT 57.374 39.130 0.00 0.00 0.00 3.67
3149 3540 5.086727 GCACTTAGTTAAGCAAATTCGTCC 58.913 41.667 0.00 0.00 36.79 4.79
3318 3710 5.765510 TCCTTGTATGGGCATACTCATTTT 58.234 37.500 0.00 0.00 43.04 1.82
3426 3819 1.210478 AGGTGCTGTTCAGTTCAGTGT 59.790 47.619 1.78 0.00 35.60 3.55
3436 3831 7.011109 GCTGTTCAGTTCAGTGTTTTTACTCTA 59.989 37.037 1.78 0.00 35.60 2.43
3437 3832 8.958119 TGTTCAGTTCAGTGTTTTTACTCTAT 57.042 30.769 0.00 0.00 0.00 1.98
3448 3843 9.965824 AGTGTTTTTACTCTATTGTGAATTTGG 57.034 29.630 0.00 0.00 0.00 3.28
3551 3946 1.151221 TTGTCAGCACATGCCAGGT 59.849 52.632 0.00 0.00 43.38 4.00
3626 4022 8.783093 GTCATTGCTGTTGTGGCTATATTTATA 58.217 33.333 0.00 0.00 0.00 0.98
3664 4060 4.684485 GCCTGCTCCTGTTATTGATACACT 60.684 45.833 0.00 0.00 0.00 3.55
3691 4087 0.694771 TTCCTCTTGTGCTGCAGGAT 59.305 50.000 17.12 0.00 32.58 3.24
3742 4138 9.098355 CTGAAAATATTCTCCATCGTAAGTTGA 57.902 33.333 0.00 0.00 36.53 3.18
3758 4154 9.491675 TCGTAAGTTGAATACCTGAAATTGTAA 57.508 29.630 0.00 0.00 39.48 2.41
3873 4283 8.757982 AGAATATGCATTGATTCAACCTTACT 57.242 30.769 19.55 0.00 35.00 2.24
3963 4373 4.943705 CCTTCTACCAGCATGTTTGTGTAT 59.056 41.667 0.00 0.00 0.00 2.29
4023 4433 7.707624 TCCAAATATTTGACTCTTGCTGAAT 57.292 32.000 26.32 0.00 40.55 2.57
4226 4637 2.060326 TCTGCGGTGAAGTAAACGAG 57.940 50.000 0.00 0.00 0.00 4.18
4327 4750 4.085357 TGTCTCCAGCACTTTGTATTGT 57.915 40.909 0.00 0.00 0.00 2.71
4334 4757 4.409570 CAGCACTTTGTATTGTGATGCTC 58.590 43.478 0.00 0.00 42.27 4.26
4335 4758 4.155462 CAGCACTTTGTATTGTGATGCTCT 59.845 41.667 0.00 0.00 42.27 4.09
4360 4784 9.811655 CTTGACATTATACTTTATATTGCCGTG 57.188 33.333 0.00 0.00 0.00 4.94
4369 4793 2.698855 ATATTGCCGTGCTCTTGACT 57.301 45.000 0.00 0.00 0.00 3.41
4425 4851 0.771755 ACTTGGAAGGGGACAGTTCC 59.228 55.000 0.00 0.00 41.66 3.62
4459 4885 3.815401 AGTTGAAGACGCTGTAATGCTTT 59.185 39.130 0.00 0.00 0.00 3.51
4460 4886 3.811722 TGAAGACGCTGTAATGCTTTG 57.188 42.857 0.00 0.00 0.00 2.77
4461 4887 3.138304 TGAAGACGCTGTAATGCTTTGT 58.862 40.909 0.00 0.00 0.00 2.83
4462 4888 3.058983 TGAAGACGCTGTAATGCTTTGTG 60.059 43.478 0.00 0.00 0.00 3.33
4463 4889 2.766313 AGACGCTGTAATGCTTTGTGA 58.234 42.857 0.00 0.00 0.00 3.58
4464 4890 3.338249 AGACGCTGTAATGCTTTGTGAT 58.662 40.909 0.00 0.00 0.00 3.06
4490 4916 3.243068 GCGTGTTTGACATGGAAACTTCT 60.243 43.478 18.22 0.00 35.71 2.85
4530 4957 3.259374 CGATATCTGGATACACCTTGGCT 59.741 47.826 0.34 0.00 46.17 4.75
4545 4972 3.429085 CTTGGCTGCAAAACATCGATAC 58.571 45.455 0.00 0.00 0.00 2.24
4572 5000 0.538584 TATGCCACTCTGAGCACAGG 59.461 55.000 11.42 4.87 42.84 4.00
4622 5050 3.945921 AGGAGCATCTGTGATTGTGAATG 59.054 43.478 0.00 0.00 33.73 2.67
4632 5060 8.877808 TCTGTGATTGTGAATGTGTCTATATC 57.122 34.615 0.00 0.00 0.00 1.63
4669 5098 0.393537 CTCTGATGGTTGGGCCTGAC 60.394 60.000 4.53 3.31 38.35 3.51
4773 5202 4.563337 TTATGCTGCTGCTTGAATGATC 57.437 40.909 17.00 0.00 40.48 2.92
4833 5264 0.526524 CGACGATGAGTTGAGCCCTC 60.527 60.000 0.00 0.00 36.30 4.30
4844 5275 0.534203 TGAGCCCTCCAACGAAACAC 60.534 55.000 0.00 0.00 0.00 3.32
4850 5281 1.873591 CCTCCAACGAAACACCTCTTG 59.126 52.381 0.00 0.00 0.00 3.02
4878 5309 2.294233 TGCAACAGTGGAAGATTCAAGC 59.706 45.455 0.00 0.00 0.00 4.01
4887 5318 2.814336 GGAAGATTCAAGCCAAGACGTT 59.186 45.455 0.00 0.00 0.00 3.99
4925 5356 2.768253 ATCTGCATTGACGTGGAAGA 57.232 45.000 0.00 0.00 0.00 2.87
4928 5359 1.667724 CTGCATTGACGTGGAAGATCC 59.332 52.381 0.00 0.00 36.96 3.36
4939 5370 3.334583 TGGAAGATCCAGGTTTTCTCG 57.665 47.619 0.00 0.00 42.67 4.04
4940 5371 2.027192 TGGAAGATCCAGGTTTTCTCGG 60.027 50.000 0.00 0.00 42.67 4.63
4941 5372 2.633488 GAAGATCCAGGTTTTCTCGGG 58.367 52.381 0.00 0.00 0.00 5.14
4942 5373 1.952621 AGATCCAGGTTTTCTCGGGA 58.047 50.000 0.00 0.00 0.00 5.14
4943 5374 1.834263 AGATCCAGGTTTTCTCGGGAG 59.166 52.381 0.00 0.00 0.00 4.30
4944 5375 1.555533 GATCCAGGTTTTCTCGGGAGT 59.444 52.381 0.00 0.00 0.00 3.85
4945 5376 0.685097 TCCAGGTTTTCTCGGGAGTG 59.315 55.000 0.00 0.00 0.00 3.51
4946 5377 0.321653 CCAGGTTTTCTCGGGAGTGG 60.322 60.000 0.00 0.00 0.00 4.00
4947 5378 0.321653 CAGGTTTTCTCGGGAGTGGG 60.322 60.000 0.00 0.00 0.00 4.61
4948 5379 1.674651 GGTTTTCTCGGGAGTGGGC 60.675 63.158 0.00 0.00 0.00 5.36
4949 5380 1.072505 GTTTTCTCGGGAGTGGGCA 59.927 57.895 0.00 0.00 0.00 5.36
4950 5381 1.072505 TTTTCTCGGGAGTGGGCAC 59.927 57.895 0.00 0.00 0.00 5.01
4951 5382 2.725203 TTTTCTCGGGAGTGGGCACG 62.725 60.000 0.00 0.00 36.20 5.34
4952 5383 4.671590 TCTCGGGAGTGGGCACGA 62.672 66.667 0.00 0.00 36.20 4.35
4953 5384 3.461773 CTCGGGAGTGGGCACGAT 61.462 66.667 0.00 0.00 34.60 3.73
4954 5385 3.432051 CTCGGGAGTGGGCACGATC 62.432 68.421 0.00 0.00 34.60 3.69
4955 5386 3.461773 CGGGAGTGGGCACGATCT 61.462 66.667 0.00 0.00 36.20 2.75
4956 5387 2.187946 GGGAGTGGGCACGATCTG 59.812 66.667 0.00 0.00 36.20 2.90
4957 5388 2.359169 GGGAGTGGGCACGATCTGA 61.359 63.158 0.00 0.00 36.20 3.27
4958 5389 1.596934 GGAGTGGGCACGATCTGAA 59.403 57.895 0.00 0.00 36.20 3.02
4959 5390 0.741221 GGAGTGGGCACGATCTGAAC 60.741 60.000 0.00 0.00 36.20 3.18
4960 5391 0.741221 GAGTGGGCACGATCTGAACC 60.741 60.000 0.00 0.00 36.20 3.62
4961 5392 1.745489 GTGGGCACGATCTGAACCC 60.745 63.158 0.00 3.65 41.24 4.11
4962 5393 2.668632 GGGCACGATCTGAACCCA 59.331 61.111 0.00 0.00 40.52 4.51
4963 5394 1.450312 GGGCACGATCTGAACCCAG 60.450 63.158 0.00 0.00 40.52 4.45
4964 5395 1.450312 GGCACGATCTGAACCCAGG 60.450 63.158 0.00 0.00 40.76 4.45
4965 5396 1.450312 GCACGATCTGAACCCAGGG 60.450 63.158 2.85 2.85 40.76 4.45
4966 5397 1.221840 CACGATCTGAACCCAGGGG 59.778 63.158 11.37 6.87 40.76 4.79
4967 5398 2.190578 CGATCTGAACCCAGGGGC 59.809 66.667 11.37 1.48 40.76 5.80
4968 5399 2.669133 CGATCTGAACCCAGGGGCA 61.669 63.158 11.37 6.80 40.76 5.36
4969 5400 1.925888 GATCTGAACCCAGGGGCAT 59.074 57.895 11.37 0.00 40.76 4.40
4970 5401 0.179006 GATCTGAACCCAGGGGCATC 60.179 60.000 11.37 5.83 40.76 3.91
4971 5402 0.625683 ATCTGAACCCAGGGGCATCT 60.626 55.000 11.37 0.00 40.76 2.90
4972 5403 1.077212 CTGAACCCAGGGGCATCTG 60.077 63.158 11.37 5.63 39.32 2.90
4973 5404 2.440980 GAACCCAGGGGCATCTGC 60.441 66.667 11.37 0.00 39.32 4.26
4974 5405 3.267233 AACCCAGGGGCATCTGCA 61.267 61.111 11.37 0.00 44.36 4.41
4975 5406 3.590466 AACCCAGGGGCATCTGCAC 62.590 63.158 11.37 0.00 45.53 4.57
4981 5412 2.036256 GGGCATCTGCACCCACTT 59.964 61.111 5.25 0.00 46.22 3.16
4982 5413 2.048603 GGGCATCTGCACCCACTTC 61.049 63.158 5.25 0.00 46.22 3.01
4983 5414 1.001641 GGCATCTGCACCCACTTCT 60.002 57.895 4.33 0.00 44.36 2.85
4984 5415 1.028868 GGCATCTGCACCCACTTCTC 61.029 60.000 4.33 0.00 44.36 2.87
4985 5416 0.321919 GCATCTGCACCCACTTCTCA 60.322 55.000 0.00 0.00 41.59 3.27
4986 5417 1.883638 GCATCTGCACCCACTTCTCAA 60.884 52.381 0.00 0.00 41.59 3.02
4987 5418 2.507484 CATCTGCACCCACTTCTCAAA 58.493 47.619 0.00 0.00 0.00 2.69
4988 5419 2.727123 TCTGCACCCACTTCTCAAAA 57.273 45.000 0.00 0.00 0.00 2.44
4989 5420 3.011566 TCTGCACCCACTTCTCAAAAA 57.988 42.857 0.00 0.00 0.00 1.94
4990 5421 2.951642 TCTGCACCCACTTCTCAAAAAG 59.048 45.455 0.00 0.00 0.00 2.27
4991 5422 2.951642 CTGCACCCACTTCTCAAAAAGA 59.048 45.455 0.00 0.00 0.00 2.52
4992 5423 3.360867 TGCACCCACTTCTCAAAAAGAA 58.639 40.909 0.00 0.00 41.81 2.52
4993 5424 3.960102 TGCACCCACTTCTCAAAAAGAAT 59.040 39.130 0.00 0.00 43.06 2.40
4994 5425 4.202141 TGCACCCACTTCTCAAAAAGAATG 60.202 41.667 0.00 0.00 43.06 2.67
4995 5426 4.301628 CACCCACTTCTCAAAAAGAATGC 58.698 43.478 0.00 0.00 43.06 3.56
4996 5427 3.960102 ACCCACTTCTCAAAAAGAATGCA 59.040 39.130 0.00 0.00 43.06 3.96
4997 5428 4.590222 ACCCACTTCTCAAAAAGAATGCAT 59.410 37.500 0.00 0.00 43.06 3.96
4998 5429 5.070847 ACCCACTTCTCAAAAAGAATGCATT 59.929 36.000 12.83 12.83 43.06 3.56
4999 5430 5.407387 CCCACTTCTCAAAAAGAATGCATTG 59.593 40.000 18.59 2.46 43.06 2.82
5000 5431 5.987347 CCACTTCTCAAAAAGAATGCATTGT 59.013 36.000 18.59 10.58 43.06 2.71
5001 5432 7.147312 CCACTTCTCAAAAAGAATGCATTGTA 58.853 34.615 18.59 0.00 43.06 2.41
5002 5433 7.652909 CCACTTCTCAAAAAGAATGCATTGTAA 59.347 33.333 18.59 1.05 43.06 2.41
5003 5434 8.697067 CACTTCTCAAAAAGAATGCATTGTAAG 58.303 33.333 18.59 13.20 43.06 2.34
5004 5435 7.383300 ACTTCTCAAAAAGAATGCATTGTAAGC 59.617 33.333 18.59 1.32 43.06 3.09
5005 5436 7.383029 CTTCTCAAAAAGAATGCATTGTAAGCA 59.617 33.333 18.59 0.00 43.06 3.91
5006 5437 6.642131 TCTCAAAAAGAATGCATTGTAAGCAC 59.358 34.615 18.59 0.00 45.95 4.40
5007 5438 6.279123 TCAAAAAGAATGCATTGTAAGCACA 58.721 32.000 18.59 0.00 45.95 4.57
5008 5439 6.930164 TCAAAAAGAATGCATTGTAAGCACAT 59.070 30.769 18.59 0.00 45.95 3.21
5009 5440 7.441760 TCAAAAAGAATGCATTGTAAGCACATT 59.558 29.630 18.59 0.00 45.95 2.71
5010 5441 7.733402 AAAAGAATGCATTGTAAGCACATTT 57.267 28.000 18.59 5.53 45.95 2.32
5011 5442 7.733402 AAAGAATGCATTGTAAGCACATTTT 57.267 28.000 18.59 0.00 45.95 1.82
5012 5443 8.830201 AAAGAATGCATTGTAAGCACATTTTA 57.170 26.923 18.59 0.00 45.95 1.52
5013 5444 8.830201 AAGAATGCATTGTAAGCACATTTTAA 57.170 26.923 18.59 0.00 45.95 1.52
5014 5445 8.830201 AGAATGCATTGTAAGCACATTTTAAA 57.170 26.923 18.59 0.00 45.95 1.52
5015 5446 9.270640 AGAATGCATTGTAAGCACATTTTAAAA 57.729 25.926 18.59 2.51 45.95 1.52
5018 5449 8.830201 TGCATTGTAAGCACATTTTAAAATCT 57.170 26.923 10.53 2.94 37.02 2.40
5019 5450 8.924691 TGCATTGTAAGCACATTTTAAAATCTC 58.075 29.630 10.53 3.51 37.02 2.75
5020 5451 8.924691 GCATTGTAAGCACATTTTAAAATCTCA 58.075 29.630 10.53 0.00 33.76 3.27
5065 5496 5.450592 TGCATACATGTTCACAAATGTGT 57.549 34.783 2.30 0.00 45.76 3.72
5066 5497 5.865013 ATGCATACATGTTCACAAATGTGTG 59.135 36.000 9.97 9.97 45.03 3.82
5067 5498 6.517027 ATGCATACATGTTCACAAATGTGTGT 60.517 34.615 15.69 11.77 44.49 3.72
5068 5499 8.472055 ATGCATACATGTTCACAAATGTGTGTG 61.472 37.037 15.69 9.08 44.49 3.82
5073 5504 2.331098 ACAAATGTGTGTGCGCGG 59.669 55.556 8.83 0.00 36.31 6.46
5074 5505 2.331098 CAAATGTGTGTGCGCGGT 59.669 55.556 8.83 0.00 0.00 5.68
5075 5506 2.010286 CAAATGTGTGTGCGCGGTG 61.010 57.895 8.83 0.00 0.00 4.94
5076 5507 3.822403 AAATGTGTGTGCGCGGTGC 62.822 57.895 8.83 6.58 46.70 5.01
5085 5516 2.920126 GCGCGGTGCAAAGTTTTG 59.080 55.556 8.83 0.28 45.45 2.44
5086 5517 1.876263 GCGCGGTGCAAAGTTTTGT 60.876 52.632 8.83 0.00 45.45 2.83
5087 5518 1.916505 CGCGGTGCAAAGTTTTGTG 59.083 52.632 0.00 0.00 40.24 3.33
5088 5519 0.524392 CGCGGTGCAAAGTTTTGTGA 60.524 50.000 0.00 0.00 40.24 3.58
5089 5520 1.634702 GCGGTGCAAAGTTTTGTGAA 58.365 45.000 6.48 0.00 40.24 3.18
5090 5521 1.996191 GCGGTGCAAAGTTTTGTGAAA 59.004 42.857 6.48 0.00 40.24 2.69
5091 5522 2.413453 GCGGTGCAAAGTTTTGTGAAAA 59.587 40.909 6.48 0.00 40.24 2.29
5092 5523 3.120511 GCGGTGCAAAGTTTTGTGAAAAA 60.121 39.130 6.48 0.00 40.24 1.94
5140 5571 5.859205 AAAAGACAAATTCCAGTGCTTCT 57.141 34.783 0.00 0.00 0.00 2.85
5141 5572 6.959639 AAAAGACAAATTCCAGTGCTTCTA 57.040 33.333 0.00 0.00 0.00 2.10
5142 5573 6.959639 AAAGACAAATTCCAGTGCTTCTAA 57.040 33.333 0.00 0.00 0.00 2.10
5143 5574 6.959639 AAGACAAATTCCAGTGCTTCTAAA 57.040 33.333 0.00 0.00 0.00 1.85
5144 5575 7.530426 AAGACAAATTCCAGTGCTTCTAAAT 57.470 32.000 0.00 0.00 0.00 1.40
5145 5576 8.635765 AAGACAAATTCCAGTGCTTCTAAATA 57.364 30.769 0.00 0.00 0.00 1.40
5146 5577 8.273780 AGACAAATTCCAGTGCTTCTAAATAG 57.726 34.615 0.00 0.00 0.00 1.73
5147 5578 6.856895 ACAAATTCCAGTGCTTCTAAATAGC 58.143 36.000 0.00 0.00 39.10 2.97
5148 5579 5.741388 AATTCCAGTGCTTCTAAATAGCG 57.259 39.130 0.00 0.00 41.54 4.26
5149 5580 3.887621 TCCAGTGCTTCTAAATAGCGT 57.112 42.857 0.00 0.00 41.54 5.07
5150 5581 4.202245 TCCAGTGCTTCTAAATAGCGTT 57.798 40.909 0.00 0.00 41.54 4.84
5151 5582 4.575885 TCCAGTGCTTCTAAATAGCGTTT 58.424 39.130 0.00 0.00 41.54 3.60
5152 5583 4.630069 TCCAGTGCTTCTAAATAGCGTTTC 59.370 41.667 0.00 0.00 41.54 2.78
5153 5584 4.391830 CCAGTGCTTCTAAATAGCGTTTCA 59.608 41.667 0.00 0.00 41.54 2.69
5154 5585 5.316770 CAGTGCTTCTAAATAGCGTTTCAC 58.683 41.667 0.00 0.00 41.54 3.18
5155 5586 4.994852 AGTGCTTCTAAATAGCGTTTCACA 59.005 37.500 0.00 0.00 41.54 3.58
5156 5587 5.468746 AGTGCTTCTAAATAGCGTTTCACAA 59.531 36.000 0.00 0.00 41.54 3.33
5157 5588 6.017440 AGTGCTTCTAAATAGCGTTTCACAAA 60.017 34.615 0.00 0.00 41.54 2.83
5158 5589 6.635239 GTGCTTCTAAATAGCGTTTCACAAAA 59.365 34.615 0.00 0.00 41.54 2.44
5159 5590 6.635239 TGCTTCTAAATAGCGTTTCACAAAAC 59.365 34.615 0.00 0.00 41.54 2.43
5160 5591 6.635239 GCTTCTAAATAGCGTTTCACAAAACA 59.365 34.615 2.38 0.00 44.13 2.83
5161 5592 7.166804 GCTTCTAAATAGCGTTTCACAAAACAA 59.833 33.333 2.38 0.00 44.13 2.83
5162 5593 9.180678 CTTCTAAATAGCGTTTCACAAAACAAT 57.819 29.630 2.38 0.00 44.13 2.71
5163 5594 9.522804 TTCTAAATAGCGTTTCACAAAACAATT 57.477 25.926 2.38 0.00 44.13 2.32
5164 5595 9.522804 TCTAAATAGCGTTTCACAAAACAATTT 57.477 25.926 2.38 6.56 44.13 1.82
5203 5634 8.515473 AGTTATTTTTCCGTGAAACTTTATGC 57.485 30.769 0.00 0.00 30.83 3.14
5204 5635 8.138712 AGTTATTTTTCCGTGAAACTTTATGCA 58.861 29.630 0.00 0.00 30.83 3.96
5205 5636 8.921670 GTTATTTTTCCGTGAAACTTTATGCAT 58.078 29.630 3.79 3.79 30.83 3.96
5206 5637 6.761731 TTTTTCCGTGAAACTTTATGCATG 57.238 33.333 10.16 0.00 30.83 4.06
5207 5638 3.485947 TCCGTGAAACTTTATGCATGC 57.514 42.857 11.82 11.82 31.75 4.06
5208 5639 2.816672 TCCGTGAAACTTTATGCATGCA 59.183 40.909 25.04 25.04 31.75 3.96
5209 5640 2.916716 CCGTGAAACTTTATGCATGCAC 59.083 45.455 25.37 8.21 31.75 4.57
5210 5641 2.589407 CGTGAAACTTTATGCATGCACG 59.411 45.455 25.37 13.98 41.17 5.34
5211 5642 3.564511 GTGAAACTTTATGCATGCACGT 58.435 40.909 25.37 14.74 0.00 4.49
5212 5643 4.667922 CGTGAAACTTTATGCATGCACGTA 60.668 41.667 25.37 10.03 41.81 3.57
5213 5644 4.788100 GTGAAACTTTATGCATGCACGTAG 59.212 41.667 25.37 20.84 0.00 3.51
5214 5645 4.693095 TGAAACTTTATGCATGCACGTAGA 59.307 37.500 25.37 6.96 0.00 2.59
5215 5646 5.180304 TGAAACTTTATGCATGCACGTAGAA 59.820 36.000 25.37 12.04 0.00 2.10
5216 5647 4.600012 ACTTTATGCATGCACGTAGAAC 57.400 40.909 25.37 0.00 0.00 3.01
5217 5648 4.000325 ACTTTATGCATGCACGTAGAACA 59.000 39.130 25.37 0.00 0.00 3.18
5218 5649 4.142902 ACTTTATGCATGCACGTAGAACAC 60.143 41.667 25.37 0.00 0.00 3.32
5235 5666 3.993103 CGAAGACGTACCGATGCC 58.007 61.111 0.00 0.00 34.56 4.40
5236 5667 1.138036 CGAAGACGTACCGATGCCA 59.862 57.895 0.00 0.00 34.56 4.92
5237 5668 0.248907 CGAAGACGTACCGATGCCAT 60.249 55.000 0.00 0.00 34.56 4.40
5238 5669 1.488527 GAAGACGTACCGATGCCATC 58.511 55.000 0.00 0.00 0.00 3.51
5239 5670 1.067212 GAAGACGTACCGATGCCATCT 59.933 52.381 2.75 0.00 0.00 2.90
5240 5671 1.112113 AGACGTACCGATGCCATCTT 58.888 50.000 2.75 0.00 0.00 2.40
5241 5672 1.480954 AGACGTACCGATGCCATCTTT 59.519 47.619 2.75 0.00 0.00 2.52
5242 5673 2.093658 AGACGTACCGATGCCATCTTTT 60.094 45.455 2.75 0.00 0.00 2.27
5243 5674 2.676342 GACGTACCGATGCCATCTTTTT 59.324 45.455 2.75 0.00 0.00 1.94
5244 5675 2.676342 ACGTACCGATGCCATCTTTTTC 59.324 45.455 2.75 0.00 0.00 2.29
5245 5676 2.285602 CGTACCGATGCCATCTTTTTCG 60.286 50.000 2.75 0.00 0.00 3.46
5246 5677 3.924238 CCGATGCCATCTTTTTCGG 57.076 52.632 2.75 0.00 42.79 4.30
5249 5680 3.698029 CGATGCCATCTTTTTCGGATT 57.302 42.857 2.75 0.00 0.00 3.01
5250 5681 4.032703 CGATGCCATCTTTTTCGGATTT 57.967 40.909 2.75 0.00 0.00 2.17
5251 5682 4.423732 CGATGCCATCTTTTTCGGATTTT 58.576 39.130 2.75 0.00 0.00 1.82
5252 5683 4.864247 CGATGCCATCTTTTTCGGATTTTT 59.136 37.500 2.75 0.00 0.00 1.94
5292 5723 8.430801 TTTGTTTTTCAAAGTGGGTTCATATG 57.569 30.769 0.00 0.00 40.56 1.78
5293 5724 5.988561 TGTTTTTCAAAGTGGGTTCATATGC 59.011 36.000 0.00 0.00 0.00 3.14
5294 5725 5.798125 TTTTCAAAGTGGGTTCATATGCA 57.202 34.783 0.00 0.00 0.00 3.96
5295 5726 4.782019 TTCAAAGTGGGTTCATATGCAC 57.218 40.909 0.00 0.00 0.00 4.57
5296 5727 3.088532 TCAAAGTGGGTTCATATGCACC 58.911 45.455 15.43 15.43 0.00 5.01
5297 5728 3.091545 CAAAGTGGGTTCATATGCACCT 58.908 45.455 21.63 2.02 31.80 4.00
5298 5729 4.018870 TCAAAGTGGGTTCATATGCACCTA 60.019 41.667 21.63 14.72 31.80 3.08
5299 5730 3.845781 AGTGGGTTCATATGCACCTAG 57.154 47.619 21.63 0.00 31.80 3.02
5300 5731 3.384168 AGTGGGTTCATATGCACCTAGA 58.616 45.455 21.63 6.03 31.80 2.43
5301 5732 3.976654 AGTGGGTTCATATGCACCTAGAT 59.023 43.478 21.63 7.03 31.80 1.98
5302 5733 4.413520 AGTGGGTTCATATGCACCTAGATT 59.586 41.667 21.63 4.50 31.80 2.40
5303 5734 4.757149 GTGGGTTCATATGCACCTAGATTC 59.243 45.833 21.63 6.83 31.80 2.52
5304 5735 3.997021 GGGTTCATATGCACCTAGATTCG 59.003 47.826 21.63 0.00 31.80 3.34
5305 5736 4.503296 GGGTTCATATGCACCTAGATTCGT 60.503 45.833 21.63 0.00 31.80 3.85
5306 5737 4.686554 GGTTCATATGCACCTAGATTCGTC 59.313 45.833 16.33 0.00 0.00 4.20
5307 5738 4.521130 TCATATGCACCTAGATTCGTCC 57.479 45.455 0.00 0.00 0.00 4.79
5308 5739 3.895041 TCATATGCACCTAGATTCGTCCA 59.105 43.478 0.00 0.00 0.00 4.02
5309 5740 4.528206 TCATATGCACCTAGATTCGTCCAT 59.472 41.667 0.00 0.00 0.00 3.41
5310 5741 2.602257 TGCACCTAGATTCGTCCATG 57.398 50.000 0.00 0.00 0.00 3.66
5311 5742 1.221414 GCACCTAGATTCGTCCATGC 58.779 55.000 0.00 0.00 0.00 4.06
5312 5743 1.473257 GCACCTAGATTCGTCCATGCA 60.473 52.381 0.00 0.00 0.00 3.96
5313 5744 2.205074 CACCTAGATTCGTCCATGCAC 58.795 52.381 0.00 0.00 0.00 4.57
5314 5745 2.111384 ACCTAGATTCGTCCATGCACT 58.889 47.619 0.00 0.00 0.00 4.40
5315 5746 2.501723 ACCTAGATTCGTCCATGCACTT 59.498 45.455 0.00 0.00 0.00 3.16
5316 5747 3.055094 ACCTAGATTCGTCCATGCACTTT 60.055 43.478 0.00 0.00 0.00 2.66
5317 5748 3.557595 CCTAGATTCGTCCATGCACTTTC 59.442 47.826 0.00 0.00 0.00 2.62
5318 5749 2.359900 AGATTCGTCCATGCACTTTCC 58.640 47.619 0.00 0.00 0.00 3.13
5319 5750 1.062587 GATTCGTCCATGCACTTTCCG 59.937 52.381 0.00 0.00 0.00 4.30
5320 5751 0.250124 TTCGTCCATGCACTTTCCGT 60.250 50.000 0.00 0.00 0.00 4.69
5321 5752 0.250124 TCGTCCATGCACTTTCCGTT 60.250 50.000 0.00 0.00 0.00 4.44
5322 5753 0.591170 CGTCCATGCACTTTCCGTTT 59.409 50.000 0.00 0.00 0.00 3.60
5323 5754 1.001815 CGTCCATGCACTTTCCGTTTT 60.002 47.619 0.00 0.00 0.00 2.43
5324 5755 2.661594 GTCCATGCACTTTCCGTTTTC 58.338 47.619 0.00 0.00 0.00 2.29
5325 5756 2.293399 GTCCATGCACTTTCCGTTTTCT 59.707 45.455 0.00 0.00 0.00 2.52
5326 5757 2.552315 TCCATGCACTTTCCGTTTTCTC 59.448 45.455 0.00 0.00 0.00 2.87
5327 5758 2.574322 CATGCACTTTCCGTTTTCTCG 58.426 47.619 0.00 0.00 0.00 4.04
5337 5768 2.598589 CCGTTTTCTCGGTCGTTATGA 58.401 47.619 0.00 0.00 44.77 2.15
5338 5769 3.184541 CCGTTTTCTCGGTCGTTATGAT 58.815 45.455 0.00 0.00 44.77 2.45
5339 5770 3.615496 CCGTTTTCTCGGTCGTTATGATT 59.385 43.478 0.00 0.00 44.77 2.57
5340 5771 4.491924 CCGTTTTCTCGGTCGTTATGATTG 60.492 45.833 0.00 0.00 44.77 2.67
5341 5772 4.491924 CGTTTTCTCGGTCGTTATGATTGG 60.492 45.833 0.00 0.00 0.00 3.16
5342 5773 3.880047 TTCTCGGTCGTTATGATTGGT 57.120 42.857 0.00 0.00 0.00 3.67
5343 5774 3.159353 TCTCGGTCGTTATGATTGGTG 57.841 47.619 0.00 0.00 0.00 4.17
5344 5775 2.159156 TCTCGGTCGTTATGATTGGTGG 60.159 50.000 0.00 0.00 0.00 4.61
5345 5776 0.655733 CGGTCGTTATGATTGGTGGC 59.344 55.000 0.00 0.00 0.00 5.01
5346 5777 1.742411 CGGTCGTTATGATTGGTGGCT 60.742 52.381 0.00 0.00 0.00 4.75
5347 5778 2.482316 CGGTCGTTATGATTGGTGGCTA 60.482 50.000 0.00 0.00 0.00 3.93
5348 5779 3.740115 GGTCGTTATGATTGGTGGCTAT 58.260 45.455 0.00 0.00 0.00 2.97
5349 5780 3.498397 GGTCGTTATGATTGGTGGCTATG 59.502 47.826 0.00 0.00 0.00 2.23
5350 5781 4.377021 GTCGTTATGATTGGTGGCTATGA 58.623 43.478 0.00 0.00 0.00 2.15
5351 5782 4.814234 GTCGTTATGATTGGTGGCTATGAA 59.186 41.667 0.00 0.00 0.00 2.57
5352 5783 5.295787 GTCGTTATGATTGGTGGCTATGAAA 59.704 40.000 0.00 0.00 0.00 2.69
5353 5784 5.527214 TCGTTATGATTGGTGGCTATGAAAG 59.473 40.000 0.00 0.00 0.00 2.62
5354 5785 5.527214 CGTTATGATTGGTGGCTATGAAAGA 59.473 40.000 0.00 0.00 0.00 2.52
5355 5786 6.038161 CGTTATGATTGGTGGCTATGAAAGAA 59.962 38.462 0.00 0.00 0.00 2.52
5356 5787 7.415095 CGTTATGATTGGTGGCTATGAAAGAAA 60.415 37.037 0.00 0.00 0.00 2.52
5357 5788 5.643379 TGATTGGTGGCTATGAAAGAAAC 57.357 39.130 0.00 0.00 0.00 2.78
5358 5789 5.076182 TGATTGGTGGCTATGAAAGAAACA 58.924 37.500 0.00 0.00 0.00 2.83
5359 5790 5.716228 TGATTGGTGGCTATGAAAGAAACAT 59.284 36.000 0.00 0.00 0.00 2.71
5360 5791 5.643379 TTGGTGGCTATGAAAGAAACATC 57.357 39.130 0.00 0.00 0.00 3.06
5361 5792 3.689161 TGGTGGCTATGAAAGAAACATCG 59.311 43.478 0.00 0.00 0.00 3.84
5362 5793 3.938963 GGTGGCTATGAAAGAAACATCGA 59.061 43.478 0.00 0.00 0.00 3.59
5363 5794 4.576463 GGTGGCTATGAAAGAAACATCGAT 59.424 41.667 0.00 0.00 0.00 3.59
5364 5795 5.504665 GGTGGCTATGAAAGAAACATCGATG 60.505 44.000 23.68 23.68 0.00 3.84
5365 5796 4.035558 TGGCTATGAAAGAAACATCGATGC 59.964 41.667 25.11 9.29 0.00 3.91
5366 5797 4.206843 GCTATGAAAGAAACATCGATGCG 58.793 43.478 25.11 2.98 0.00 4.73
5367 5798 3.680642 ATGAAAGAAACATCGATGCGG 57.319 42.857 25.11 2.18 0.00 5.69
5368 5799 2.422597 TGAAAGAAACATCGATGCGGT 58.577 42.857 25.11 10.45 0.00 5.68
5369 5800 2.811431 TGAAAGAAACATCGATGCGGTT 59.189 40.909 25.11 16.14 0.00 4.44
5370 5801 3.252215 TGAAAGAAACATCGATGCGGTTT 59.748 39.130 25.11 17.39 37.44 3.27
5371 5802 3.915437 AAGAAACATCGATGCGGTTTT 57.085 38.095 25.11 17.04 35.08 2.43
5372 5803 3.915437 AGAAACATCGATGCGGTTTTT 57.085 38.095 25.11 16.68 35.08 1.94
5373 5804 3.564511 AGAAACATCGATGCGGTTTTTG 58.435 40.909 25.11 0.00 35.08 2.44
5374 5805 2.346099 AACATCGATGCGGTTTTTGG 57.654 45.000 25.11 0.00 0.00 3.28
5375 5806 1.529226 ACATCGATGCGGTTTTTGGA 58.471 45.000 25.11 0.00 0.00 3.53
5376 5807 1.883275 ACATCGATGCGGTTTTTGGAA 59.117 42.857 25.11 0.00 0.00 3.53
5377 5808 2.095263 ACATCGATGCGGTTTTTGGAAG 60.095 45.455 25.11 0.00 0.00 3.46
5378 5809 0.239879 TCGATGCGGTTTTTGGAAGC 59.760 50.000 0.00 0.00 0.00 3.86
5379 5810 0.039617 CGATGCGGTTTTTGGAAGCA 60.040 50.000 0.00 0.00 42.28 3.91
5381 5812 1.994779 GATGCGGTTTTTGGAAGCATG 59.005 47.619 5.94 0.00 46.89 4.06
5382 5813 1.035923 TGCGGTTTTTGGAAGCATGA 58.964 45.000 0.00 0.00 32.43 3.07
5383 5814 1.617850 TGCGGTTTTTGGAAGCATGAT 59.382 42.857 0.00 0.00 32.43 2.45
5384 5815 2.262211 GCGGTTTTTGGAAGCATGATC 58.738 47.619 0.00 0.00 0.00 2.92
5385 5816 2.094545 GCGGTTTTTGGAAGCATGATCT 60.095 45.455 0.00 0.00 0.00 2.75
5386 5817 3.504863 CGGTTTTTGGAAGCATGATCTG 58.495 45.455 0.00 0.00 0.00 2.90
5399 5830 5.663795 GCATGATCTGCGAATCTTTCTAA 57.336 39.130 0.00 0.00 41.97 2.10
5400 5831 5.438972 GCATGATCTGCGAATCTTTCTAAC 58.561 41.667 0.00 0.00 41.97 2.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
435 698 9.097257 GACCATGAATTGAAAAGAAAAGTTTGA 57.903 29.630 0.00 0.00 0.00 2.69
570 835 5.751990 GTGATGCTCATTTTGGGAAATCATC 59.248 40.000 0.00 0.00 36.04 2.92
805 1073 1.637553 ACCACAGGAATTGCTGAGGAT 59.362 47.619 37.31 23.69 35.70 3.24
806 1074 1.067295 ACCACAGGAATTGCTGAGGA 58.933 50.000 37.31 0.00 35.70 3.71
807 1075 1.915141 AACCACAGGAATTGCTGAGG 58.085 50.000 31.91 31.91 37.35 3.86
808 1076 3.152341 AGAAACCACAGGAATTGCTGAG 58.848 45.455 30.84 23.13 0.00 3.35
809 1077 3.228188 AGAAACCACAGGAATTGCTGA 57.772 42.857 30.84 0.00 0.00 4.26
810 1078 3.318839 TGAAGAAACCACAGGAATTGCTG 59.681 43.478 23.77 23.77 0.00 4.41
811 1079 3.565307 TGAAGAAACCACAGGAATTGCT 58.435 40.909 0.00 0.00 0.00 3.91
812 1080 4.051237 GTTGAAGAAACCACAGGAATTGC 58.949 43.478 0.00 0.00 32.13 3.56
813 1081 5.507985 GGAGTTGAAGAAACCACAGGAATTG 60.508 44.000 0.00 0.00 39.85 2.32
814 1082 4.584743 GGAGTTGAAGAAACCACAGGAATT 59.415 41.667 0.00 0.00 39.85 2.17
815 1083 4.145052 GGAGTTGAAGAAACCACAGGAAT 58.855 43.478 0.00 0.00 39.85 3.01
816 1084 3.053991 TGGAGTTGAAGAAACCACAGGAA 60.054 43.478 0.00 0.00 39.85 3.36
817 1085 2.507886 TGGAGTTGAAGAAACCACAGGA 59.492 45.455 0.00 0.00 39.85 3.86
818 1086 2.930950 TGGAGTTGAAGAAACCACAGG 58.069 47.619 0.00 0.00 39.85 4.00
819 1087 4.440112 GGTTTGGAGTTGAAGAAACCACAG 60.440 45.833 0.00 0.00 44.54 3.66
820 1088 3.445805 GGTTTGGAGTTGAAGAAACCACA 59.554 43.478 0.00 0.00 44.54 4.17
821 1089 3.488553 CGGTTTGGAGTTGAAGAAACCAC 60.489 47.826 11.83 0.00 45.13 4.16
822 1090 2.685897 CGGTTTGGAGTTGAAGAAACCA 59.314 45.455 11.83 0.00 45.13 3.67
823 1091 2.946990 TCGGTTTGGAGTTGAAGAAACC 59.053 45.455 0.00 0.00 42.61 3.27
824 1092 4.348656 GTTCGGTTTGGAGTTGAAGAAAC 58.651 43.478 0.00 0.00 39.24 2.78
825 1093 3.064271 CGTTCGGTTTGGAGTTGAAGAAA 59.936 43.478 0.00 0.00 0.00 2.52
826 1094 2.610374 CGTTCGGTTTGGAGTTGAAGAA 59.390 45.455 0.00 0.00 0.00 2.52
827 1095 2.206750 CGTTCGGTTTGGAGTTGAAGA 58.793 47.619 0.00 0.00 0.00 2.87
828 1096 1.263217 CCGTTCGGTTTGGAGTTGAAG 59.737 52.381 2.82 0.00 0.00 3.02
829 1097 1.301423 CCGTTCGGTTTGGAGTTGAA 58.699 50.000 2.82 0.00 0.00 2.69
830 1098 0.533308 CCCGTTCGGTTTGGAGTTGA 60.533 55.000 10.36 0.00 0.00 3.18
831 1099 1.512156 CCCCGTTCGGTTTGGAGTTG 61.512 60.000 10.36 0.00 0.00 3.16
832 1100 1.228033 CCCCGTTCGGTTTGGAGTT 60.228 57.895 10.36 0.00 0.00 3.01
833 1101 2.428622 CCCCGTTCGGTTTGGAGT 59.571 61.111 10.36 0.00 0.00 3.85
834 1102 3.053896 GCCCCGTTCGGTTTGGAG 61.054 66.667 10.36 0.00 0.00 3.86
835 1103 4.646877 GGCCCCGTTCGGTTTGGA 62.647 66.667 10.36 0.00 0.00 3.53
836 1104 2.751357 TTAGGCCCCGTTCGGTTTGG 62.751 60.000 0.00 5.69 0.00 3.28
837 1105 1.302671 TTAGGCCCCGTTCGGTTTG 60.303 57.895 0.00 0.14 0.00 2.93
838 1106 1.302752 GTTAGGCCCCGTTCGGTTT 60.303 57.895 0.00 0.00 0.00 3.27
839 1107 2.348620 GTTAGGCCCCGTTCGGTT 59.651 61.111 0.00 0.00 0.00 4.44
840 1108 3.709633 GGTTAGGCCCCGTTCGGT 61.710 66.667 0.00 0.00 0.00 4.69
841 1109 4.825252 CGGTTAGGCCCCGTTCGG 62.825 72.222 10.49 4.08 40.59 4.30
922 1191 2.510906 GTACGGCAGGCCCATCAT 59.489 61.111 0.00 0.00 0.00 2.45
924 1193 4.564110 GGGTACGGCAGGCCCATC 62.564 72.222 12.46 0.00 41.93 3.51
950 1226 8.514330 AAAGACGATTTTGCCCTTGTATAATA 57.486 30.769 0.00 0.00 0.00 0.98
951 1227 7.404671 AAAGACGATTTTGCCCTTGTATAAT 57.595 32.000 0.00 0.00 0.00 1.28
952 1228 6.827586 AAAGACGATTTTGCCCTTGTATAA 57.172 33.333 0.00 0.00 0.00 0.98
967 1243 0.107848 CCCGCTGGGTAAAAGACGAT 60.108 55.000 5.56 0.00 38.25 3.73
1103 1388 2.947785 AGGGAGAGGGACGGAGGT 60.948 66.667 0.00 0.00 0.00 3.85
1204 1492 2.454941 GGAGGAGGAGTTGGGGGA 59.545 66.667 0.00 0.00 0.00 4.81
1206 1494 2.692741 GGGGAGGAGGAGTTGGGG 60.693 72.222 0.00 0.00 0.00 4.96
1207 1495 3.083997 CGGGGAGGAGGAGTTGGG 61.084 72.222 0.00 0.00 0.00 4.12
1208 1496 3.787001 GCGGGGAGGAGGAGTTGG 61.787 72.222 0.00 0.00 0.00 3.77
1209 1497 3.787001 GGCGGGGAGGAGGAGTTG 61.787 72.222 0.00 0.00 0.00 3.16
1387 1734 2.351738 GCCAACAGAATCGGTGGAAAAG 60.352 50.000 12.11 0.00 0.00 2.27
1388 1735 1.611491 GCCAACAGAATCGGTGGAAAA 59.389 47.619 12.11 0.00 0.00 2.29
1389 1736 1.243902 GCCAACAGAATCGGTGGAAA 58.756 50.000 12.11 0.00 0.00 3.13
1390 1737 0.109532 TGCCAACAGAATCGGTGGAA 59.890 50.000 12.11 0.18 0.00 3.53
1391 1738 0.605319 GTGCCAACAGAATCGGTGGA 60.605 55.000 12.11 0.00 0.00 4.02
1392 1739 0.606401 AGTGCCAACAGAATCGGTGG 60.606 55.000 5.10 5.10 0.00 4.61
1393 1740 1.732259 GTAGTGCCAACAGAATCGGTG 59.268 52.381 0.00 0.00 0.00 4.94
1394 1741 1.671850 CGTAGTGCCAACAGAATCGGT 60.672 52.381 0.00 0.00 0.00 4.69
1395 1742 0.999406 CGTAGTGCCAACAGAATCGG 59.001 55.000 0.00 0.00 0.00 4.18
1396 1743 1.990799 TCGTAGTGCCAACAGAATCG 58.009 50.000 0.00 0.00 0.00 3.34
1397 1744 2.030946 GCATCGTAGTGCCAACAGAATC 59.969 50.000 0.00 0.00 39.18 2.52
1398 1745 2.009774 GCATCGTAGTGCCAACAGAAT 58.990 47.619 0.00 0.00 39.18 2.40
1399 1746 1.438651 GCATCGTAGTGCCAACAGAA 58.561 50.000 0.00 0.00 39.18 3.02
1400 1747 0.735978 CGCATCGTAGTGCCAACAGA 60.736 55.000 5.01 0.00 42.06 3.41
1401 1748 1.014044 ACGCATCGTAGTGCCAACAG 61.014 55.000 5.01 0.00 42.06 3.16
1402 1749 1.005512 ACGCATCGTAGTGCCAACA 60.006 52.632 5.01 0.00 42.06 3.33
1403 1750 1.419922 CACGCATCGTAGTGCCAAC 59.580 57.895 5.01 0.00 42.06 3.77
1404 1751 3.869187 CACGCATCGTAGTGCCAA 58.131 55.556 5.01 0.00 42.06 4.52
1408 1755 4.251909 CGCGCACGCATCGTAGTG 62.252 66.667 16.04 0.00 38.32 2.74
1409 1756 4.470170 TCGCGCACGCATCGTAGT 62.470 61.111 16.04 0.00 38.32 2.73
1410 1757 3.672397 CTCGCGCACGCATCGTAG 61.672 66.667 16.04 0.00 38.32 3.51
1585 1932 1.830477 ACCTGCAACACCAAACAACAT 59.170 42.857 0.00 0.00 0.00 2.71
1609 1956 2.240414 TCTCAATCACAGGTGCCATCAT 59.760 45.455 0.00 0.00 0.00 2.45
1610 1957 1.629861 TCTCAATCACAGGTGCCATCA 59.370 47.619 0.00 0.00 0.00 3.07
1703 2050 3.693085 AGCAGATGAACATTACAGCAAGG 59.307 43.478 0.00 0.00 0.00 3.61
1730 2077 6.237901 ACAGAGCACACTTTAACATGGAATA 58.762 36.000 0.00 0.00 0.00 1.75
1849 2196 3.687212 ACACAACTTGACGAATGAACACA 59.313 39.130 0.00 0.00 0.00 3.72
1881 2228 6.793203 GTCATAACTTAATTTCAAACGTCGCA 59.207 34.615 0.00 0.00 0.00 5.10
1882 2229 6.793203 TGTCATAACTTAATTTCAAACGTCGC 59.207 34.615 0.00 0.00 0.00 5.19
1921 2268 5.567423 GCTTCATTTTAACAGGCATGGTCTT 60.567 40.000 2.31 0.00 0.00 3.01
2042 2390 3.259625 ACTCCTAAGAGAGCCAAGTGAAC 59.740 47.826 0.00 0.00 43.39 3.18
2091 2442 5.048083 GCAACTTTTACAATGATCCTGGACA 60.048 40.000 0.00 0.00 0.00 4.02
2092 2443 5.183904 AGCAACTTTTACAATGATCCTGGAC 59.816 40.000 0.00 0.00 0.00 4.02
2093 2444 5.324409 AGCAACTTTTACAATGATCCTGGA 58.676 37.500 0.00 0.00 0.00 3.86
2094 2445 5.649782 AGCAACTTTTACAATGATCCTGG 57.350 39.130 0.00 0.00 0.00 4.45
2095 2446 6.680810 TGAAGCAACTTTTACAATGATCCTG 58.319 36.000 0.00 0.00 0.00 3.86
2096 2447 6.899393 TGAAGCAACTTTTACAATGATCCT 57.101 33.333 0.00 0.00 0.00 3.24
2097 2448 9.076596 GTTATGAAGCAACTTTTACAATGATCC 57.923 33.333 0.00 0.00 0.00 3.36
2098 2449 9.846248 AGTTATGAAGCAACTTTTACAATGATC 57.154 29.630 0.00 0.00 32.28 2.92
2103 2454 8.780249 GGACTAGTTATGAAGCAACTTTTACAA 58.220 33.333 0.00 0.00 37.42 2.41
2104 2455 7.934665 TGGACTAGTTATGAAGCAACTTTTACA 59.065 33.333 0.00 0.00 37.42 2.41
2105 2456 8.228464 GTGGACTAGTTATGAAGCAACTTTTAC 58.772 37.037 0.00 0.00 37.42 2.01
2106 2457 7.934665 TGTGGACTAGTTATGAAGCAACTTTTA 59.065 33.333 0.00 0.00 37.42 1.52
2107 2458 6.770785 TGTGGACTAGTTATGAAGCAACTTTT 59.229 34.615 0.00 0.00 37.42 2.27
2108 2459 6.296026 TGTGGACTAGTTATGAAGCAACTTT 58.704 36.000 0.00 0.00 37.42 2.66
2109 2460 5.865085 TGTGGACTAGTTATGAAGCAACTT 58.135 37.500 0.00 0.00 37.42 2.66
2110 2461 5.012148 ACTGTGGACTAGTTATGAAGCAACT 59.988 40.000 0.00 0.00 39.50 3.16
2111 2462 5.238583 ACTGTGGACTAGTTATGAAGCAAC 58.761 41.667 0.00 0.00 0.00 4.17
2112 2463 5.483685 ACTGTGGACTAGTTATGAAGCAA 57.516 39.130 0.00 0.00 0.00 3.91
2113 2464 5.483685 AACTGTGGACTAGTTATGAAGCA 57.516 39.130 0.00 0.00 36.66 3.91
2114 2465 6.631962 ACTAACTGTGGACTAGTTATGAAGC 58.368 40.000 0.00 0.00 39.23 3.86
2115 2466 7.545965 CCAACTAACTGTGGACTAGTTATGAAG 59.454 40.741 0.00 0.00 39.23 3.02
2116 2467 7.233962 TCCAACTAACTGTGGACTAGTTATGAA 59.766 37.037 0.00 0.00 39.23 2.57
2117 2468 6.722590 TCCAACTAACTGTGGACTAGTTATGA 59.277 38.462 0.00 1.85 39.23 2.15
2118 2469 6.931838 TCCAACTAACTGTGGACTAGTTATG 58.068 40.000 0.00 0.00 39.23 1.90
2119 2470 7.735326 ATCCAACTAACTGTGGACTAGTTAT 57.265 36.000 0.00 0.00 39.23 1.89
2120 2471 8.834004 ATATCCAACTAACTGTGGACTAGTTA 57.166 34.615 0.00 0.00 39.06 2.24
2121 2472 7.735326 ATATCCAACTAACTGTGGACTAGTT 57.265 36.000 0.00 0.00 41.06 2.24
2122 2473 7.620094 AGAATATCCAACTAACTGTGGACTAGT 59.380 37.037 0.00 0.00 31.90 2.57
2123 2474 7.923344 CAGAATATCCAACTAACTGTGGACTAG 59.077 40.741 0.00 0.00 31.90 2.57
2124 2475 7.399191 ACAGAATATCCAACTAACTGTGGACTA 59.601 37.037 0.00 0.00 36.11 2.59
2156 2542 5.586243 TCCTGCTAGATTTTTGGAAAGATCG 59.414 40.000 0.00 0.00 35.39 3.69
2265 2651 3.252458 TCTTAAACGGAGGCAAAAGCTTC 59.748 43.478 0.00 0.00 0.00 3.86
2338 2726 2.705658 CTCCCAATGGGTGCTATACTGA 59.294 50.000 19.28 0.00 44.74 3.41
2447 2835 2.121009 CAAACCAACCCTTAAAACGCG 58.879 47.619 3.53 3.53 0.00 6.01
2574 2962 0.526662 CCAGTTTCGTAGGAGCGAGT 59.473 55.000 0.00 0.00 42.10 4.18
2610 2998 2.403378 GCGGCTTCGTATTTGGCCA 61.403 57.895 0.00 0.00 44.27 5.36
2645 3033 1.062148 GCTTCGTATTTGGTCGCTTCC 59.938 52.381 0.00 0.00 0.00 3.46
2767 3155 5.163513 CCGTAAACAACTACGACCTGTAAT 58.836 41.667 4.81 0.00 46.00 1.89
2782 3170 2.566724 ACCGGAATAGAACCCGTAAACA 59.433 45.455 9.46 0.00 43.93 2.83
2800 3188 5.782145 CAGTTTTAGACGGAAAAAGTGACCG 60.782 44.000 15.98 0.00 44.50 4.79
2805 3193 7.475015 GGTTTACAGTTTTAGACGGAAAAAGT 58.525 34.615 0.00 0.00 30.36 2.66
2813 3201 2.159934 CGCCGGTTTACAGTTTTAGACG 60.160 50.000 1.90 0.00 0.00 4.18
2978 3366 3.931907 ATAGCTATGCTGAACCAACCA 57.068 42.857 5.15 0.00 40.10 3.67
3024 3415 4.250464 TGAGTTATACCAAGCTTCAACCG 58.750 43.478 0.00 0.00 0.00 4.44
3164 3555 1.327460 CGTGTCTGGAATATGTTGCCG 59.673 52.381 0.00 0.00 0.00 5.69
3292 3684 5.387113 TGAGTATGCCCATACAAGGAAAT 57.613 39.130 17.82 0.00 44.58 2.17
3436 3831 3.006752 ACACGCAATCCCAAATTCACAAT 59.993 39.130 0.00 0.00 0.00 2.71
3437 3832 2.363680 ACACGCAATCCCAAATTCACAA 59.636 40.909 0.00 0.00 0.00 3.33
3448 3843 1.092348 GTCCCCTTTACACGCAATCC 58.908 55.000 0.00 0.00 0.00 3.01
3551 3946 3.196039 CCTTGCATGGTCAAATCATTCCA 59.804 43.478 10.48 0.00 0.00 3.53
3664 4060 4.826733 TGCAGCACAAGAGGAAAAGAAATA 59.173 37.500 0.00 0.00 0.00 1.40
3691 4087 2.257207 CTAAGTCTGGTCCCAAGTCCA 58.743 52.381 0.00 0.00 0.00 4.02
3730 4126 8.450964 ACAATTTCAGGTATTCAACTTACGATG 58.549 33.333 0.00 0.00 0.00 3.84
3786 4182 9.599866 TCATTACCATGAAACAGAATAGTACTG 57.400 33.333 5.39 0.00 36.41 2.74
3963 4373 6.183360 GGATGAAGGTTGGTAAGAACACAAAA 60.183 38.462 0.00 0.00 0.00 2.44
4170 4581 3.247648 CAGCACTGTACTGTTTGTGTACC 59.752 47.826 2.16 0.00 39.42 3.34
4171 4582 3.869246 ACAGCACTGTACTGTTTGTGTAC 59.131 43.478 7.85 0.00 46.01 2.90
4172 4583 4.131649 ACAGCACTGTACTGTTTGTGTA 57.868 40.909 7.85 0.00 46.01 2.90
4226 4637 2.760092 TCATGGCCAGGCTTGTTTATTC 59.240 45.455 13.87 0.00 0.00 1.75
4275 4686 0.794473 GGCCCGTAGCATAATTACGC 59.206 55.000 0.00 0.00 46.50 4.42
4334 4757 9.811655 CACGGCAATATAAAGTATAATGTCAAG 57.188 33.333 0.00 0.00 27.98 3.02
4335 4758 8.286800 GCACGGCAATATAAAGTATAATGTCAA 58.713 33.333 0.00 0.00 27.98 3.18
4354 4778 2.472695 ATAAAGTCAAGAGCACGGCA 57.527 45.000 0.00 0.00 0.00 5.69
4357 4781 6.408858 ACAATGTATAAAGTCAAGAGCACG 57.591 37.500 0.00 0.00 0.00 5.34
4360 4784 7.905493 GCAAGTACAATGTATAAAGTCAAGAGC 59.095 37.037 0.00 0.00 0.00 4.09
4369 4793 5.707764 TGCCTGTGCAAGTACAATGTATAAA 59.292 36.000 0.00 0.00 46.66 1.40
4413 4837 0.779997 ATGCAAAGGAACTGTCCCCT 59.220 50.000 0.00 0.00 46.30 4.79
4425 4851 4.461405 CGTCTTCAACTCTTCATGCAAAG 58.539 43.478 0.00 0.00 0.00 2.77
4459 4885 3.494045 TGTCAAACACGCAAAATCACA 57.506 38.095 0.00 0.00 0.00 3.58
4460 4886 3.182173 CCATGTCAAACACGCAAAATCAC 59.818 43.478 0.00 0.00 0.00 3.06
4461 4887 3.067320 TCCATGTCAAACACGCAAAATCA 59.933 39.130 0.00 0.00 0.00 2.57
4462 4888 3.637432 TCCATGTCAAACACGCAAAATC 58.363 40.909 0.00 0.00 0.00 2.17
4463 4889 3.724508 TCCATGTCAAACACGCAAAAT 57.275 38.095 0.00 0.00 0.00 1.82
4464 4890 3.510388 TTCCATGTCAAACACGCAAAA 57.490 38.095 0.00 0.00 0.00 2.44
4490 4916 3.306917 TCGAAACAAGATCGTAAGGCA 57.693 42.857 0.00 0.00 40.99 4.75
4530 4957 3.342377 TCCAGGTATCGATGTTTTGCA 57.658 42.857 8.54 0.00 0.00 4.08
4545 4972 3.474600 CTCAGAGTGGCATAAATCCAGG 58.525 50.000 0.00 0.00 33.63 4.45
4582 5010 5.586243 TGCTCCTAAATAGACATGCAGAAAC 59.414 40.000 0.00 0.00 0.00 2.78
4591 5019 6.737720 ATCACAGATGCTCCTAAATAGACA 57.262 37.500 0.00 0.00 0.00 3.41
4622 5050 1.409412 CAGCGCCACGATATAGACAC 58.591 55.000 2.29 0.00 0.00 3.67
4773 5202 6.688637 TCATTTACTCTGGCAAATGATGAG 57.311 37.500 7.31 3.03 43.00 2.90
4783 5212 8.296713 TCATGTTTTACTTTCATTTACTCTGGC 58.703 33.333 0.00 0.00 0.00 4.85
4799 5230 6.019801 ACTCATCGTCGCTAATCATGTTTTAC 60.020 38.462 0.00 0.00 0.00 2.01
4802 5233 4.433615 ACTCATCGTCGCTAATCATGTTT 58.566 39.130 0.00 0.00 0.00 2.83
4833 5264 0.041312 CGCAAGAGGTGTTTCGTTGG 60.041 55.000 0.00 0.00 43.02 3.77
4850 5281 2.677836 TCTTCCACTGTTGCATTATCGC 59.322 45.455 0.00 0.00 0.00 4.58
4878 5309 6.367695 TGATCACAAGTATTACAACGTCTTGG 59.632 38.462 13.44 5.09 39.49 3.61
4887 5318 7.330262 TGCAGATTCTGATCACAAGTATTACA 58.670 34.615 17.87 0.00 34.60 2.41
4925 5356 1.279271 CACTCCCGAGAAAACCTGGAT 59.721 52.381 0.00 0.00 0.00 3.41
4928 5359 0.321653 CCCACTCCCGAGAAAACCTG 60.322 60.000 0.00 0.00 0.00 4.00
4931 5362 1.072505 TGCCCACTCCCGAGAAAAC 59.927 57.895 0.00 0.00 0.00 2.43
4938 5369 3.461773 AGATCGTGCCCACTCCCG 61.462 66.667 0.00 0.00 0.00 5.14
4939 5370 1.899437 TTCAGATCGTGCCCACTCCC 61.899 60.000 0.00 0.00 0.00 4.30
4940 5371 0.741221 GTTCAGATCGTGCCCACTCC 60.741 60.000 0.00 0.00 0.00 3.85
4941 5372 0.741221 GGTTCAGATCGTGCCCACTC 60.741 60.000 0.00 0.00 0.00 3.51
4942 5373 1.296715 GGTTCAGATCGTGCCCACT 59.703 57.895 0.00 0.00 0.00 4.00
4943 5374 1.745489 GGGTTCAGATCGTGCCCAC 60.745 63.158 11.18 0.00 39.13 4.61
4944 5375 2.184020 CTGGGTTCAGATCGTGCCCA 62.184 60.000 15.88 15.88 46.14 5.36
4945 5376 1.450312 CTGGGTTCAGATCGTGCCC 60.450 63.158 9.71 9.71 43.49 5.36
4946 5377 1.450312 CCTGGGTTCAGATCGTGCC 60.450 63.158 0.00 0.00 43.49 5.01
4947 5378 1.450312 CCCTGGGTTCAGATCGTGC 60.450 63.158 3.97 0.00 43.49 5.34
4948 5379 1.221840 CCCCTGGGTTCAGATCGTG 59.778 63.158 12.71 0.00 43.49 4.35
4949 5380 2.670148 GCCCCTGGGTTCAGATCGT 61.670 63.158 12.71 0.00 43.49 3.73
4950 5381 1.987807 ATGCCCCTGGGTTCAGATCG 61.988 60.000 12.71 0.00 43.49 3.69
4951 5382 0.179006 GATGCCCCTGGGTTCAGATC 60.179 60.000 12.71 1.50 43.49 2.75
4952 5383 0.625683 AGATGCCCCTGGGTTCAGAT 60.626 55.000 12.71 0.00 43.49 2.90
4953 5384 1.229951 AGATGCCCCTGGGTTCAGA 60.230 57.895 12.71 0.00 43.49 3.27
4954 5385 1.077212 CAGATGCCCCTGGGTTCAG 60.077 63.158 12.71 0.00 40.59 3.02
4955 5386 3.089838 CAGATGCCCCTGGGTTCA 58.910 61.111 12.71 9.64 37.65 3.18
4956 5387 2.440980 GCAGATGCCCCTGGGTTC 60.441 66.667 12.71 5.75 37.65 3.62
4957 5388 3.267233 TGCAGATGCCCCTGGGTT 61.267 61.111 12.71 0.00 41.18 4.11
4958 5389 4.052518 GTGCAGATGCCCCTGGGT 62.053 66.667 12.71 0.00 41.18 4.51
4959 5390 4.828296 GGTGCAGATGCCCCTGGG 62.828 72.222 5.50 5.50 41.18 4.45
4960 5391 4.828296 GGGTGCAGATGCCCCTGG 62.828 72.222 18.69 0.00 43.68 4.45
4961 5392 4.051167 TGGGTGCAGATGCCCCTG 62.051 66.667 23.42 0.00 45.75 4.45
4962 5393 4.052518 GTGGGTGCAGATGCCCCT 62.053 66.667 23.42 0.00 45.75 4.79
4963 5394 3.590466 AAGTGGGTGCAGATGCCCC 62.590 63.158 18.99 18.99 45.76 5.80
4964 5395 2.036256 AAGTGGGTGCAGATGCCC 59.964 61.111 3.10 3.10 45.04 5.36
4965 5396 1.001641 AGAAGTGGGTGCAGATGCC 60.002 57.895 1.72 0.00 41.18 4.40
4966 5397 0.321919 TGAGAAGTGGGTGCAGATGC 60.322 55.000 0.00 0.00 42.50 3.91
4967 5398 2.189594 TTGAGAAGTGGGTGCAGATG 57.810 50.000 0.00 0.00 0.00 2.90
4968 5399 2.957402 TTTGAGAAGTGGGTGCAGAT 57.043 45.000 0.00 0.00 0.00 2.90
4969 5400 2.727123 TTTTGAGAAGTGGGTGCAGA 57.273 45.000 0.00 0.00 0.00 4.26
4970 5401 2.951642 TCTTTTTGAGAAGTGGGTGCAG 59.048 45.455 0.00 0.00 0.00 4.41
4971 5402 3.011566 TCTTTTTGAGAAGTGGGTGCA 57.988 42.857 0.00 0.00 0.00 4.57
4972 5403 4.301628 CATTCTTTTTGAGAAGTGGGTGC 58.698 43.478 0.00 0.00 46.99 5.01
4973 5404 4.202141 TGCATTCTTTTTGAGAAGTGGGTG 60.202 41.667 0.00 0.00 46.99 4.61
4974 5405 3.960102 TGCATTCTTTTTGAGAAGTGGGT 59.040 39.130 0.00 0.00 46.99 4.51
4975 5406 4.589216 TGCATTCTTTTTGAGAAGTGGG 57.411 40.909 0.00 0.00 46.99 4.61
4976 5407 5.987347 ACAATGCATTCTTTTTGAGAAGTGG 59.013 36.000 9.53 0.00 46.99 4.00
4977 5408 8.578308 TTACAATGCATTCTTTTTGAGAAGTG 57.422 30.769 9.53 0.00 46.99 3.16
4978 5409 7.383300 GCTTACAATGCATTCTTTTTGAGAAGT 59.617 33.333 9.53 2.48 46.99 3.01
4979 5410 7.383029 TGCTTACAATGCATTCTTTTTGAGAAG 59.617 33.333 9.53 9.12 46.99 2.85
4981 5412 6.642131 GTGCTTACAATGCATTCTTTTTGAGA 59.358 34.615 9.53 0.00 42.69 3.27
4982 5413 6.421501 TGTGCTTACAATGCATTCTTTTTGAG 59.578 34.615 9.53 0.00 42.69 3.02
4983 5414 6.279123 TGTGCTTACAATGCATTCTTTTTGA 58.721 32.000 9.53 0.00 42.69 2.69
4984 5415 6.528014 TGTGCTTACAATGCATTCTTTTTG 57.472 33.333 9.53 0.90 42.69 2.44
4985 5416 7.733402 AATGTGCTTACAATGCATTCTTTTT 57.267 28.000 9.53 0.00 42.69 1.94
4986 5417 7.733402 AAATGTGCTTACAATGCATTCTTTT 57.267 28.000 9.53 4.77 42.69 2.27
4987 5418 7.733402 AAAATGTGCTTACAATGCATTCTTT 57.267 28.000 9.53 0.00 42.69 2.52
4988 5419 8.830201 TTAAAATGTGCTTACAATGCATTCTT 57.170 26.923 9.53 1.89 42.69 2.52
4989 5420 8.830201 TTTAAAATGTGCTTACAATGCATTCT 57.170 26.923 9.53 0.00 42.69 2.40
4992 5423 9.439500 AGATTTTAAAATGTGCTTACAATGCAT 57.561 25.926 17.98 0.00 42.69 3.96
4993 5424 8.830201 AGATTTTAAAATGTGCTTACAATGCA 57.170 26.923 17.98 0.00 38.19 3.96
4994 5425 8.924691 TGAGATTTTAAAATGTGCTTACAATGC 58.075 29.630 17.98 0.00 0.00 3.56
5056 5487 2.331098 CCGCGCACACACATTTGT 59.669 55.556 8.75 0.00 35.84 2.83
5057 5488 2.010286 CACCGCGCACACACATTTG 61.010 57.895 8.75 0.00 0.00 2.32
5058 5489 2.331098 CACCGCGCACACACATTT 59.669 55.556 8.75 0.00 0.00 2.32
5059 5490 4.326766 GCACCGCGCACACACATT 62.327 61.111 8.75 0.00 41.79 2.71
5068 5499 1.876263 ACAAAACTTTGCACCGCGC 60.876 52.632 0.00 0.00 41.79 6.86
5069 5500 0.524392 TCACAAAACTTTGCACCGCG 60.524 50.000 0.00 0.00 41.79 6.46
5070 5501 1.634702 TTCACAAAACTTTGCACCGC 58.365 45.000 2.07 0.00 41.79 5.68
5071 5502 4.653806 TTTTTCACAAAACTTTGCACCG 57.346 36.364 2.07 0.00 41.79 4.94
5117 5548 6.225981 AGAAGCACTGGAATTTGTCTTTTT 57.774 33.333 0.00 0.00 0.00 1.94
5118 5549 5.859205 AGAAGCACTGGAATTTGTCTTTT 57.141 34.783 0.00 0.00 0.00 2.27
5119 5550 6.959639 TTAGAAGCACTGGAATTTGTCTTT 57.040 33.333 0.00 0.00 0.00 2.52
5120 5551 6.959639 TTTAGAAGCACTGGAATTTGTCTT 57.040 33.333 0.00 0.00 0.00 3.01
5121 5552 7.148171 GCTATTTAGAAGCACTGGAATTTGTCT 60.148 37.037 0.00 0.00 39.83 3.41
5122 5553 6.969473 GCTATTTAGAAGCACTGGAATTTGTC 59.031 38.462 0.00 0.00 39.83 3.18
5123 5554 6.403636 CGCTATTTAGAAGCACTGGAATTTGT 60.404 38.462 0.00 0.00 40.08 2.83
5124 5555 5.967674 CGCTATTTAGAAGCACTGGAATTTG 59.032 40.000 0.00 0.00 40.08 2.32
5125 5556 5.648092 ACGCTATTTAGAAGCACTGGAATTT 59.352 36.000 0.00 0.00 40.08 1.82
5126 5557 5.186198 ACGCTATTTAGAAGCACTGGAATT 58.814 37.500 0.00 0.00 40.08 2.17
5127 5558 4.770795 ACGCTATTTAGAAGCACTGGAAT 58.229 39.130 0.00 0.00 40.08 3.01
5128 5559 4.202245 ACGCTATTTAGAAGCACTGGAA 57.798 40.909 0.00 0.00 40.08 3.53
5129 5560 3.887621 ACGCTATTTAGAAGCACTGGA 57.112 42.857 0.00 0.00 40.08 3.86
5130 5561 4.391830 TGAAACGCTATTTAGAAGCACTGG 59.608 41.667 0.00 0.00 40.08 4.00
5131 5562 5.107104 TGTGAAACGCTATTTAGAAGCACTG 60.107 40.000 0.00 0.00 42.39 3.66
5132 5563 4.994852 TGTGAAACGCTATTTAGAAGCACT 59.005 37.500 0.00 0.00 42.39 4.40
5133 5564 5.277601 TGTGAAACGCTATTTAGAAGCAC 57.722 39.130 0.00 0.00 42.39 4.40
5134 5565 5.933187 TTGTGAAACGCTATTTAGAAGCA 57.067 34.783 0.00 0.00 42.39 3.91
5135 5566 6.635239 TGTTTTGTGAAACGCTATTTAGAAGC 59.365 34.615 0.00 0.00 46.44 3.86
5136 5567 8.555166 TTGTTTTGTGAAACGCTATTTAGAAG 57.445 30.769 0.00 0.00 46.44 2.85
5137 5568 9.522804 AATTGTTTTGTGAAACGCTATTTAGAA 57.477 25.926 0.00 0.00 46.44 2.10
5138 5569 9.522804 AAATTGTTTTGTGAAACGCTATTTAGA 57.477 25.926 0.00 0.00 46.44 2.10
5177 5608 8.974408 GCATAAAGTTTCACGGAAAAATAACTT 58.026 29.630 0.00 0.00 37.41 2.66
5178 5609 8.138712 TGCATAAAGTTTCACGGAAAAATAACT 58.861 29.630 0.00 0.00 33.14 2.24
5179 5610 8.288217 TGCATAAAGTTTCACGGAAAAATAAC 57.712 30.769 0.00 0.00 33.14 1.89
5180 5611 8.920665 CATGCATAAAGTTTCACGGAAAAATAA 58.079 29.630 0.00 0.00 33.14 1.40
5181 5612 7.062839 GCATGCATAAAGTTTCACGGAAAAATA 59.937 33.333 14.21 0.00 33.14 1.40
5182 5613 6.128580 GCATGCATAAAGTTTCACGGAAAAAT 60.129 34.615 14.21 0.00 33.14 1.82
5183 5614 5.176590 GCATGCATAAAGTTTCACGGAAAAA 59.823 36.000 14.21 0.00 33.14 1.94
5184 5615 4.683781 GCATGCATAAAGTTTCACGGAAAA 59.316 37.500 14.21 0.00 33.14 2.29
5185 5616 4.233789 GCATGCATAAAGTTTCACGGAAA 58.766 39.130 14.21 0.00 0.00 3.13
5186 5617 3.254411 TGCATGCATAAAGTTTCACGGAA 59.746 39.130 18.46 0.00 0.00 4.30
5187 5618 2.816672 TGCATGCATAAAGTTTCACGGA 59.183 40.909 18.46 0.00 0.00 4.69
5188 5619 2.916716 GTGCATGCATAAAGTTTCACGG 59.083 45.455 25.64 0.00 0.00 4.94
5189 5620 2.589407 CGTGCATGCATAAAGTTTCACG 59.411 45.455 25.64 14.36 39.68 4.35
5190 5621 3.564511 ACGTGCATGCATAAAGTTTCAC 58.435 40.909 25.64 5.57 0.00 3.18
5191 5622 3.913548 ACGTGCATGCATAAAGTTTCA 57.086 38.095 25.64 0.00 0.00 2.69
5192 5623 5.216566 TCTACGTGCATGCATAAAGTTTC 57.783 39.130 25.64 7.15 0.00 2.78
5193 5624 5.049060 TGTTCTACGTGCATGCATAAAGTTT 60.049 36.000 25.64 5.81 0.00 2.66
5194 5625 4.454161 TGTTCTACGTGCATGCATAAAGTT 59.546 37.500 25.64 7.23 0.00 2.66
5195 5626 4.000325 TGTTCTACGTGCATGCATAAAGT 59.000 39.130 25.64 21.74 0.00 2.66
5196 5627 4.334443 GTGTTCTACGTGCATGCATAAAG 58.666 43.478 25.64 19.72 0.00 1.85
5197 5628 4.335082 GTGTTCTACGTGCATGCATAAA 57.665 40.909 25.64 10.97 0.00 1.40
5225 5656 2.031683 CCGAAAAAGATGGCATCGGTAC 59.968 50.000 21.01 11.89 45.96 3.34
5226 5657 2.285083 CCGAAAAAGATGGCATCGGTA 58.715 47.619 21.01 0.00 45.96 4.02
5227 5658 1.094785 CCGAAAAAGATGGCATCGGT 58.905 50.000 21.01 11.03 45.96 4.69
5228 5659 3.924238 CCGAAAAAGATGGCATCGG 57.076 52.632 21.01 15.50 45.88 4.18
5229 5660 3.698029 AATCCGAAAAAGATGGCATCG 57.302 42.857 21.01 10.23 0.00 3.84
5263 5694 8.171164 TGAACCCACTTTGAAAAACAAATTTT 57.829 26.923 0.00 0.00 45.63 1.82
5264 5695 7.751768 TGAACCCACTTTGAAAAACAAATTT 57.248 28.000 0.00 0.00 45.63 1.82
5265 5696 7.936496 ATGAACCCACTTTGAAAAACAAATT 57.064 28.000 0.00 0.00 45.63 1.82
5266 5697 9.054922 CATATGAACCCACTTTGAAAAACAAAT 57.945 29.630 0.00 0.00 45.63 2.32
5267 5698 7.011857 GCATATGAACCCACTTTGAAAAACAAA 59.988 33.333 6.97 0.00 44.79 2.83
5268 5699 6.481644 GCATATGAACCCACTTTGAAAAACAA 59.518 34.615 6.97 0.00 36.65 2.83
5269 5700 5.988561 GCATATGAACCCACTTTGAAAAACA 59.011 36.000 6.97 0.00 0.00 2.83
5270 5701 5.988561 TGCATATGAACCCACTTTGAAAAAC 59.011 36.000 6.97 0.00 0.00 2.43
5271 5702 5.988561 GTGCATATGAACCCACTTTGAAAAA 59.011 36.000 6.97 0.00 0.00 1.94
5272 5703 5.510520 GGTGCATATGAACCCACTTTGAAAA 60.511 40.000 21.16 0.00 37.82 2.29
5273 5704 4.021544 GGTGCATATGAACCCACTTTGAAA 60.022 41.667 21.16 0.00 37.82 2.69
5274 5705 3.509575 GGTGCATATGAACCCACTTTGAA 59.490 43.478 21.16 0.00 37.82 2.69
5275 5706 3.088532 GGTGCATATGAACCCACTTTGA 58.911 45.455 21.16 0.00 37.82 2.69
5276 5707 3.091545 AGGTGCATATGAACCCACTTTG 58.908 45.455 26.91 0.00 45.33 2.77
5277 5708 3.456380 AGGTGCATATGAACCCACTTT 57.544 42.857 26.91 7.47 45.33 2.66
5278 5709 3.780294 TCTAGGTGCATATGAACCCACTT 59.220 43.478 26.91 12.72 45.33 3.16
5279 5710 3.384168 TCTAGGTGCATATGAACCCACT 58.616 45.455 26.91 13.06 45.33 4.00
5280 5711 3.838244 TCTAGGTGCATATGAACCCAC 57.162 47.619 26.91 14.59 45.33 4.61
5281 5712 4.503123 CGAATCTAGGTGCATATGAACCCA 60.503 45.833 26.91 14.72 45.33 4.51
5282 5713 3.997021 CGAATCTAGGTGCATATGAACCC 59.003 47.826 26.91 11.21 45.33 4.11
5283 5714 4.632153 ACGAATCTAGGTGCATATGAACC 58.368 43.478 23.85 23.85 44.50 3.62
5284 5715 4.686554 GGACGAATCTAGGTGCATATGAAC 59.313 45.833 6.97 5.99 0.00 3.18
5285 5716 4.343814 TGGACGAATCTAGGTGCATATGAA 59.656 41.667 6.97 0.00 29.13 2.57
5286 5717 3.895041 TGGACGAATCTAGGTGCATATGA 59.105 43.478 6.97 0.00 29.13 2.15
5287 5718 4.257267 TGGACGAATCTAGGTGCATATG 57.743 45.455 0.00 0.00 29.13 1.78
5288 5719 4.825422 CATGGACGAATCTAGGTGCATAT 58.175 43.478 4.09 0.00 42.28 1.78
5289 5720 3.554960 GCATGGACGAATCTAGGTGCATA 60.555 47.826 4.09 0.00 42.28 3.14
5290 5721 2.808202 GCATGGACGAATCTAGGTGCAT 60.808 50.000 0.00 0.00 44.54 3.96
5291 5722 1.473257 GCATGGACGAATCTAGGTGCA 60.473 52.381 0.00 0.00 38.85 4.57
5292 5723 1.221414 GCATGGACGAATCTAGGTGC 58.779 55.000 0.00 0.00 0.00 5.01
5293 5724 2.159043 AGTGCATGGACGAATCTAGGTG 60.159 50.000 12.02 0.00 0.00 4.00
5294 5725 2.111384 AGTGCATGGACGAATCTAGGT 58.889 47.619 12.02 0.00 0.00 3.08
5295 5726 2.898729 AGTGCATGGACGAATCTAGG 57.101 50.000 12.02 0.00 0.00 3.02
5296 5727 3.557595 GGAAAGTGCATGGACGAATCTAG 59.442 47.826 12.02 0.00 0.00 2.43
5297 5728 3.531538 GGAAAGTGCATGGACGAATCTA 58.468 45.455 12.02 0.00 0.00 1.98
5298 5729 2.359900 GGAAAGTGCATGGACGAATCT 58.640 47.619 12.02 0.00 0.00 2.40
5299 5730 1.062587 CGGAAAGTGCATGGACGAATC 59.937 52.381 12.02 10.93 0.00 2.52
5300 5731 1.086696 CGGAAAGTGCATGGACGAAT 58.913 50.000 12.02 1.97 0.00 3.34
5301 5732 0.250124 ACGGAAAGTGCATGGACGAA 60.250 50.000 12.02 0.00 0.00 3.85
5302 5733 0.250124 AACGGAAAGTGCATGGACGA 60.250 50.000 12.02 0.00 0.00 4.20
5303 5734 0.591170 AAACGGAAAGTGCATGGACG 59.409 50.000 12.02 2.01 0.00 4.79
5304 5735 2.293399 AGAAAACGGAAAGTGCATGGAC 59.707 45.455 9.70 9.70 0.00 4.02
5305 5736 2.552315 GAGAAAACGGAAAGTGCATGGA 59.448 45.455 0.00 0.00 0.00 3.41
5306 5737 2.665519 CGAGAAAACGGAAAGTGCATGG 60.666 50.000 0.00 0.00 0.00 3.66
5307 5738 2.574322 CGAGAAAACGGAAAGTGCATG 58.426 47.619 0.00 0.00 0.00 4.06
5308 5739 2.969443 CGAGAAAACGGAAAGTGCAT 57.031 45.000 0.00 0.00 0.00 3.96
5318 5749 4.491924 CCAATCATAACGACCGAGAAAACG 60.492 45.833 0.00 0.00 0.00 3.60
5319 5750 4.390909 ACCAATCATAACGACCGAGAAAAC 59.609 41.667 0.00 0.00 0.00 2.43
5320 5751 4.390603 CACCAATCATAACGACCGAGAAAA 59.609 41.667 0.00 0.00 0.00 2.29
5321 5752 3.930229 CACCAATCATAACGACCGAGAAA 59.070 43.478 0.00 0.00 0.00 2.52
5322 5753 3.517602 CACCAATCATAACGACCGAGAA 58.482 45.455 0.00 0.00 0.00 2.87
5323 5754 2.159156 CCACCAATCATAACGACCGAGA 60.159 50.000 0.00 0.00 0.00 4.04
5324 5755 2.201732 CCACCAATCATAACGACCGAG 58.798 52.381 0.00 0.00 0.00 4.63
5325 5756 1.741055 GCCACCAATCATAACGACCGA 60.741 52.381 0.00 0.00 0.00 4.69
5326 5757 0.655733 GCCACCAATCATAACGACCG 59.344 55.000 0.00 0.00 0.00 4.79
5327 5758 2.038387 AGCCACCAATCATAACGACC 57.962 50.000 0.00 0.00 0.00 4.79
5328 5759 4.377021 TCATAGCCACCAATCATAACGAC 58.623 43.478 0.00 0.00 0.00 4.34
5329 5760 4.681074 TCATAGCCACCAATCATAACGA 57.319 40.909 0.00 0.00 0.00 3.85
5330 5761 5.527214 TCTTTCATAGCCACCAATCATAACG 59.473 40.000 0.00 0.00 0.00 3.18
5331 5762 6.942532 TCTTTCATAGCCACCAATCATAAC 57.057 37.500 0.00 0.00 0.00 1.89
5332 5763 7.395772 TGTTTCTTTCATAGCCACCAATCATAA 59.604 33.333 0.00 0.00 0.00 1.90
5333 5764 6.889177 TGTTTCTTTCATAGCCACCAATCATA 59.111 34.615 0.00 0.00 0.00 2.15
5334 5765 5.716228 TGTTTCTTTCATAGCCACCAATCAT 59.284 36.000 0.00 0.00 0.00 2.45
5335 5766 5.076182 TGTTTCTTTCATAGCCACCAATCA 58.924 37.500 0.00 0.00 0.00 2.57
5336 5767 5.643379 TGTTTCTTTCATAGCCACCAATC 57.357 39.130 0.00 0.00 0.00 2.67
5337 5768 5.163622 CGATGTTTCTTTCATAGCCACCAAT 60.164 40.000 0.00 0.00 0.00 3.16
5338 5769 4.155826 CGATGTTTCTTTCATAGCCACCAA 59.844 41.667 0.00 0.00 0.00 3.67
5339 5770 3.689161 CGATGTTTCTTTCATAGCCACCA 59.311 43.478 0.00 0.00 0.00 4.17
5340 5771 3.938963 TCGATGTTTCTTTCATAGCCACC 59.061 43.478 0.00 0.00 0.00 4.61
5341 5772 5.505286 CATCGATGTTTCTTTCATAGCCAC 58.495 41.667 17.50 0.00 0.00 5.01
5342 5773 4.035558 GCATCGATGTTTCTTTCATAGCCA 59.964 41.667 25.47 0.00 0.00 4.75
5343 5774 4.531332 GCATCGATGTTTCTTTCATAGCC 58.469 43.478 25.47 0.96 0.00 3.93
5344 5775 4.206843 CGCATCGATGTTTCTTTCATAGC 58.793 43.478 25.47 6.37 0.00 2.97
5345 5776 4.271049 ACCGCATCGATGTTTCTTTCATAG 59.729 41.667 25.47 0.00 0.00 2.23
5346 5777 4.188462 ACCGCATCGATGTTTCTTTCATA 58.812 39.130 25.47 0.00 0.00 2.15
5347 5778 3.009723 ACCGCATCGATGTTTCTTTCAT 58.990 40.909 25.47 0.34 0.00 2.57
5348 5779 2.422597 ACCGCATCGATGTTTCTTTCA 58.577 42.857 25.47 0.00 0.00 2.69
5349 5780 3.471495 AACCGCATCGATGTTTCTTTC 57.529 42.857 25.47 7.03 0.00 2.62
5350 5781 3.915437 AAACCGCATCGATGTTTCTTT 57.085 38.095 25.47 14.67 0.00 2.52
5351 5782 3.915437 AAAACCGCATCGATGTTTCTT 57.085 38.095 25.47 12.09 31.37 2.52
5352 5783 3.564511 CAAAAACCGCATCGATGTTTCT 58.435 40.909 25.47 3.79 31.37 2.52
5353 5784 2.661195 CCAAAAACCGCATCGATGTTTC 59.339 45.455 25.47 9.16 31.37 2.78
5354 5785 2.294791 TCCAAAAACCGCATCGATGTTT 59.705 40.909 25.47 15.53 33.86 2.83
5355 5786 1.883275 TCCAAAAACCGCATCGATGTT 59.117 42.857 25.47 10.35 0.00 2.71
5356 5787 1.529226 TCCAAAAACCGCATCGATGT 58.471 45.000 25.47 4.14 0.00 3.06
5357 5788 2.518949 CTTCCAAAAACCGCATCGATG 58.481 47.619 21.27 21.27 0.00 3.84
5358 5789 1.135402 GCTTCCAAAAACCGCATCGAT 60.135 47.619 0.00 0.00 0.00 3.59
5359 5790 0.239879 GCTTCCAAAAACCGCATCGA 59.760 50.000 0.00 0.00 0.00 3.59
5360 5791 0.039617 TGCTTCCAAAAACCGCATCG 60.040 50.000 0.00 0.00 0.00 3.84
5361 5792 1.994779 CATGCTTCCAAAAACCGCATC 59.005 47.619 0.00 0.00 39.10 3.91
5362 5793 1.617850 TCATGCTTCCAAAAACCGCAT 59.382 42.857 0.00 0.00 41.56 4.73
5363 5794 1.035923 TCATGCTTCCAAAAACCGCA 58.964 45.000 0.00 0.00 34.83 5.69
5364 5795 2.094545 AGATCATGCTTCCAAAAACCGC 60.095 45.455 0.00 0.00 0.00 5.68
5365 5796 3.504863 CAGATCATGCTTCCAAAAACCG 58.495 45.455 0.00 0.00 0.00 4.44


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.