Multiple sequence alignment - TraesCS7B01G378800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G378800 chr7B 100.000 4039 0 0 1 4039 643337719 643341757 0.000000e+00 7459.0
1 TraesCS7B01G378800 chr7B 81.350 563 91 9 2182 2743 42777624 42777075 2.860000e-121 446.0
2 TraesCS7B01G378800 chr7B 77.821 257 39 10 1631 1881 42778244 42778000 4.210000e-30 143.0
3 TraesCS7B01G378800 chr7D 93.701 2302 110 14 943 3215 579141385 579143680 0.000000e+00 3415.0
4 TraesCS7B01G378800 chr7D 80.942 934 79 45 47 952 579140266 579141128 0.000000e+00 647.0
5 TraesCS7B01G378800 chr7D 91.086 359 27 3 3530 3885 579143678 579144034 7.850000e-132 481.0
6 TraesCS7B01G378800 chr7D 91.925 161 12 1 3310 3470 579143515 579143674 1.460000e-54 224.0
7 TraesCS7B01G378800 chr7D 93.023 129 8 1 3908 4035 579144220 579144348 1.920000e-43 187.0
8 TraesCS7B01G378800 chr7D 79.216 255 33 12 1631 1878 91810707 91810948 4.180000e-35 159.0
9 TraesCS7B01G378800 chr7D 97.297 37 1 0 3276 3312 579143678 579143714 3.370000e-06 63.9
10 TraesCS7B01G378800 chr5D 80.059 1685 216 71 1125 2754 449014958 449016577 0.000000e+00 1140.0
11 TraesCS7B01G378800 chr5A 79.142 1702 233 72 1172 2818 567781264 567782898 0.000000e+00 1064.0
12 TraesCS7B01G378800 chr5A 78.320 738 103 33 1179 1892 567896579 567897283 1.340000e-114 424.0
13 TraesCS7B01G378800 chr3D 85.729 960 100 13 1830 2754 571706328 571707285 0.000000e+00 979.0
14 TraesCS7B01G378800 chr3D 84.861 971 110 16 1830 2766 598465661 598464694 0.000000e+00 944.0
15 TraesCS7B01G378800 chr3D 93.151 73 4 1 704 775 580123270 580123342 5.520000e-19 106.0
16 TraesCS7B01G378800 chr6D 85.391 972 105 13 1830 2766 63717252 63716283 0.000000e+00 974.0
17 TraesCS7B01G378800 chr5B 78.256 1651 224 84 1179 2754 549082823 549081233 0.000000e+00 935.0
18 TraesCS7B01G378800 chr6B 84.394 974 114 27 1828 2766 665718589 665717619 0.000000e+00 922.0
19 TraesCS7B01G378800 chr6B 82.143 84 9 3 601 678 101661675 101661592 2.610000e-07 67.6
20 TraesCS7B01G378800 chr7A 83.402 482 77 2 2262 2743 93489522 93490000 1.030000e-120 444.0
21 TraesCS7B01G378800 chr7A 79.134 254 35 10 1631 1878 93488831 93489072 4.180000e-35 159.0
22 TraesCS7B01G378800 chr7A 100.000 30 0 0 599 628 294805279 294805250 5.640000e-04 56.5
23 TraesCS7B01G378800 chr6A 90.541 74 5 2 624 697 532532788 532532859 3.320000e-16 97.1
24 TraesCS7B01G378800 chr1D 76.163 172 26 8 601 757 1249874 1250045 4.330000e-10 76.8
25 TraesCS7B01G378800 chr1D 87.719 57 5 1 623 679 480967032 480966978 9.370000e-07 65.8
26 TraesCS7B01G378800 chr3B 80.198 101 14 3 599 693 220347010 220347110 2.010000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G378800 chr7B 643337719 643341757 4038 False 7459.000000 7459 100.0000 1 4039 1 chr7B.!!$F1 4038
1 TraesCS7B01G378800 chr7B 42777075 42778244 1169 True 294.500000 446 79.5855 1631 2743 2 chr7B.!!$R1 1112
2 TraesCS7B01G378800 chr7D 579140266 579144348 4082 False 836.316667 3415 91.3290 47 4035 6 chr7D.!!$F2 3988
3 TraesCS7B01G378800 chr5D 449014958 449016577 1619 False 1140.000000 1140 80.0590 1125 2754 1 chr5D.!!$F1 1629
4 TraesCS7B01G378800 chr5A 567781264 567782898 1634 False 1064.000000 1064 79.1420 1172 2818 1 chr5A.!!$F1 1646
5 TraesCS7B01G378800 chr5A 567896579 567897283 704 False 424.000000 424 78.3200 1179 1892 1 chr5A.!!$F2 713
6 TraesCS7B01G378800 chr3D 571706328 571707285 957 False 979.000000 979 85.7290 1830 2754 1 chr3D.!!$F1 924
7 TraesCS7B01G378800 chr3D 598464694 598465661 967 True 944.000000 944 84.8610 1830 2766 1 chr3D.!!$R1 936
8 TraesCS7B01G378800 chr6D 63716283 63717252 969 True 974.000000 974 85.3910 1830 2766 1 chr6D.!!$R1 936
9 TraesCS7B01G378800 chr5B 549081233 549082823 1590 True 935.000000 935 78.2560 1179 2754 1 chr5B.!!$R1 1575
10 TraesCS7B01G378800 chr6B 665717619 665718589 970 True 922.000000 922 84.3940 1828 2766 1 chr6B.!!$R2 938
11 TraesCS7B01G378800 chr7A 93488831 93490000 1169 False 301.500000 444 81.2680 1631 2743 2 chr7A.!!$F1 1112

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
839 872 0.036022 ACCACAAGGAAGCTCTCAGC 59.964 55.0 0.0 0.0 39.05 4.26 F
1063 1366 0.108138 GCAATGGCAGACGAGGTAGT 60.108 55.0 0.0 0.0 40.72 2.73 F
1718 2048 0.179111 TCGTCCTCGCCATGATCAAC 60.179 55.0 0.0 0.0 36.96 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2609 3095 0.103390 TGAACCGCTTCGTCTTGACA 59.897 50.0 1.59 0.0 0.00 3.58 R
2854 3340 0.174845 TCCGGAAACCGTAGATGCAG 59.825 55.0 0.00 0.0 46.80 4.41 R
3179 3665 0.029834 GATGCACAATCACGCCATCC 59.970 55.0 0.00 0.0 35.16 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.299050 GACACATCCAACACGTCCA 57.701 52.632 0.00 0.00 0.00 4.02
19 20 1.808411 GACACATCCAACACGTCCAT 58.192 50.000 0.00 0.00 0.00 3.41
20 21 2.967362 GACACATCCAACACGTCCATA 58.033 47.619 0.00 0.00 0.00 2.74
21 22 3.331150 GACACATCCAACACGTCCATAA 58.669 45.455 0.00 0.00 0.00 1.90
22 23 3.745799 ACACATCCAACACGTCCATAAA 58.254 40.909 0.00 0.00 0.00 1.40
23 24 4.331968 ACACATCCAACACGTCCATAAAT 58.668 39.130 0.00 0.00 0.00 1.40
24 25 4.155826 ACACATCCAACACGTCCATAAATG 59.844 41.667 0.00 0.00 0.00 2.32
25 26 4.394610 CACATCCAACACGTCCATAAATGA 59.605 41.667 0.00 0.00 0.00 2.57
26 27 5.007034 ACATCCAACACGTCCATAAATGAA 58.993 37.500 0.00 0.00 0.00 2.57
27 28 5.475220 ACATCCAACACGTCCATAAATGAAA 59.525 36.000 0.00 0.00 0.00 2.69
28 29 6.015856 ACATCCAACACGTCCATAAATGAAAA 60.016 34.615 0.00 0.00 0.00 2.29
29 30 5.764131 TCCAACACGTCCATAAATGAAAAC 58.236 37.500 0.00 0.00 0.00 2.43
30 31 5.299531 TCCAACACGTCCATAAATGAAAACA 59.700 36.000 0.00 0.00 0.00 2.83
31 32 6.015856 TCCAACACGTCCATAAATGAAAACAT 60.016 34.615 0.00 0.00 0.00 2.71
32 33 7.175119 TCCAACACGTCCATAAATGAAAACATA 59.825 33.333 0.00 0.00 0.00 2.29
33 34 7.973388 CCAACACGTCCATAAATGAAAACATAT 59.027 33.333 0.00 0.00 0.00 1.78
34 35 9.995957 CAACACGTCCATAAATGAAAACATATA 57.004 29.630 0.00 0.00 0.00 0.86
77 78 4.220821 AGAAAGCAAGTCTAAGATGGACGA 59.779 41.667 0.00 0.00 38.58 4.20
98 99 4.438744 CGAGGTCCTATCCAAAAATTGCAC 60.439 45.833 0.00 0.00 0.00 4.57
106 107 1.607509 CCAAAAATTGCACGGCCATCA 60.608 47.619 2.24 0.00 0.00 3.07
107 108 1.727880 CAAAAATTGCACGGCCATCAG 59.272 47.619 2.24 0.00 0.00 2.90
114 115 1.434622 GCACGGCCATCAGTGATGAG 61.435 60.000 30.63 22.52 42.09 2.90
121 122 4.205587 GGCCATCAGTGATGAGAGAAAAT 58.794 43.478 30.63 0.00 42.09 1.82
122 123 5.371526 GGCCATCAGTGATGAGAGAAAATA 58.628 41.667 30.63 0.00 42.09 1.40
123 124 6.002704 GGCCATCAGTGATGAGAGAAAATAT 58.997 40.000 30.63 0.00 42.09 1.28
155 157 2.715737 CTCTAGTAAGAGGCGCCATC 57.284 55.000 31.54 22.25 44.82 3.51
182 188 1.381327 CCTTGTCCTCCGGCCTCTA 60.381 63.158 0.00 0.00 0.00 2.43
183 189 1.395826 CCTTGTCCTCCGGCCTCTAG 61.396 65.000 0.00 0.00 0.00 2.43
199 205 5.242069 CCTCTAGAGGCATACATACATCG 57.758 47.826 25.73 0.00 42.44 3.84
200 206 4.944317 CCTCTAGAGGCATACATACATCGA 59.056 45.833 25.73 0.00 42.44 3.59
201 207 5.592282 CCTCTAGAGGCATACATACATCGAT 59.408 44.000 25.73 0.00 42.44 3.59
202 208 6.768381 CCTCTAGAGGCATACATACATCGATA 59.232 42.308 25.73 0.00 42.44 2.92
203 209 7.283354 CCTCTAGAGGCATACATACATCGATAA 59.717 40.741 25.73 0.00 42.44 1.75
204 210 7.986562 TCTAGAGGCATACATACATCGATAAC 58.013 38.462 0.00 0.00 0.00 1.89
205 211 5.967088 AGAGGCATACATACATCGATAACC 58.033 41.667 0.00 0.00 0.00 2.85
206 212 5.717178 AGAGGCATACATACATCGATAACCT 59.283 40.000 0.00 0.00 0.00 3.50
207 213 5.724328 AGGCATACATACATCGATAACCTG 58.276 41.667 0.00 0.00 0.00 4.00
208 214 4.330074 GGCATACATACATCGATAACCTGC 59.670 45.833 0.00 1.50 0.00 4.85
209 215 4.929211 GCATACATACATCGATAACCTGCA 59.071 41.667 0.00 0.00 0.00 4.41
210 216 5.582269 GCATACATACATCGATAACCTGCAT 59.418 40.000 0.00 0.00 0.00 3.96
211 217 6.456047 GCATACATACATCGATAACCTGCATG 60.456 42.308 0.00 0.00 0.00 4.06
212 218 4.318332 ACATACATCGATAACCTGCATGG 58.682 43.478 0.00 0.00 42.93 3.66
213 219 4.040339 ACATACATCGATAACCTGCATGGA 59.960 41.667 0.00 0.00 39.71 3.41
222 228 5.504665 CGATAACCTGCATGGAAGATGAAAC 60.505 44.000 8.91 0.00 39.71 2.78
228 234 5.407387 CCTGCATGGAAGATGAAACTTTTTG 59.593 40.000 0.00 0.00 38.35 2.44
230 236 6.347696 TGCATGGAAGATGAAACTTTTTGTT 58.652 32.000 0.00 0.00 41.29 2.83
257 263 6.324512 TCAAAACCATAGCATGATAAAGCCAT 59.675 34.615 0.00 0.00 0.00 4.40
277 283 7.593825 AGCCATAATTTTAATGATACGGAAGC 58.406 34.615 0.00 0.00 0.00 3.86
281 287 9.729023 CATAATTTTAATGATACGGAAGCACAA 57.271 29.630 0.00 0.00 0.00 3.33
311 317 2.029380 GCAAAATAGCAACCGAACCCTT 60.029 45.455 0.00 0.00 0.00 3.95
344 359 6.957631 ACATTTGGTTCCTGAGTGTATATGA 58.042 36.000 0.00 0.00 0.00 2.15
345 360 7.402054 ACATTTGGTTCCTGAGTGTATATGAA 58.598 34.615 0.00 0.00 0.00 2.57
349 364 8.877864 TTGGTTCCTGAGTGTATATGAAAAAT 57.122 30.769 0.00 0.00 0.00 1.82
549 566 1.808411 TGCTTGAAGTCGATGGGAAC 58.192 50.000 0.00 0.00 0.00 3.62
550 567 1.347707 TGCTTGAAGTCGATGGGAACT 59.652 47.619 0.00 0.00 0.00 3.01
614 631 1.607612 CCCACATACACTCACCCCC 59.392 63.158 0.00 0.00 0.00 5.40
615 632 0.914417 CCCACATACACTCACCCCCT 60.914 60.000 0.00 0.00 0.00 4.79
616 633 1.624113 CCCACATACACTCACCCCCTA 60.624 57.143 0.00 0.00 0.00 3.53
617 634 2.408565 CCACATACACTCACCCCCTAT 58.591 52.381 0.00 0.00 0.00 2.57
618 635 2.104792 CCACATACACTCACCCCCTATG 59.895 54.545 0.00 0.00 0.00 2.23
619 636 3.038280 CACATACACTCACCCCCTATGA 58.962 50.000 0.00 0.00 0.00 2.15
620 637 3.454447 CACATACACTCACCCCCTATGAA 59.546 47.826 0.00 0.00 0.00 2.57
621 638 4.103153 CACATACACTCACCCCCTATGAAT 59.897 45.833 0.00 0.00 0.00 2.57
622 639 4.103153 ACATACACTCACCCCCTATGAATG 59.897 45.833 0.00 0.00 29.78 2.67
623 640 1.212935 ACACTCACCCCCTATGAATGC 59.787 52.381 0.00 0.00 26.18 3.56
624 641 1.212688 CACTCACCCCCTATGAATGCA 59.787 52.381 0.00 0.00 0.00 3.96
625 642 1.212935 ACTCACCCCCTATGAATGCAC 59.787 52.381 0.00 0.00 0.00 4.57
626 643 1.212688 CTCACCCCCTATGAATGCACA 59.787 52.381 0.00 0.00 0.00 4.57
627 644 1.064758 TCACCCCCTATGAATGCACAC 60.065 52.381 0.00 0.00 0.00 3.82
628 645 0.258774 ACCCCCTATGAATGCACACC 59.741 55.000 0.00 0.00 0.00 4.16
629 646 0.468029 CCCCCTATGAATGCACACCC 60.468 60.000 0.00 0.00 0.00 4.61
630 647 0.552848 CCCCTATGAATGCACACCCT 59.447 55.000 0.00 0.00 0.00 4.34
631 648 1.774254 CCCCTATGAATGCACACCCTA 59.226 52.381 0.00 0.00 0.00 3.53
632 649 2.487265 CCCCTATGAATGCACACCCTAC 60.487 54.545 0.00 0.00 0.00 3.18
633 650 2.439507 CCCTATGAATGCACACCCTACT 59.560 50.000 0.00 0.00 0.00 2.57
634 651 3.495100 CCCTATGAATGCACACCCTACTC 60.495 52.174 0.00 0.00 0.00 2.59
635 652 2.717639 ATGAATGCACACCCTACTCC 57.282 50.000 0.00 0.00 0.00 3.85
636 653 1.656587 TGAATGCACACCCTACTCCT 58.343 50.000 0.00 0.00 0.00 3.69
637 654 2.827755 TGAATGCACACCCTACTCCTA 58.172 47.619 0.00 0.00 0.00 2.94
651 668 4.459685 CCTACTCCTATATGAACACCTCCG 59.540 50.000 0.00 0.00 0.00 4.63
656 673 6.781014 ACTCCTATATGAACACCTCCGAAATA 59.219 38.462 0.00 0.00 0.00 1.40
671 688 2.345641 CGAAATACTGAGCCGACACAAG 59.654 50.000 0.00 0.00 0.00 3.16
688 705 5.167121 ACACAAGATCTTGAGATTGACGAG 58.833 41.667 36.15 16.26 42.93 4.18
689 706 4.565962 CACAAGATCTTGAGATTGACGAGG 59.434 45.833 36.15 10.26 42.93 4.63
698 715 5.852282 TGAGATTGACGAGGTCATCATAA 57.148 39.130 0.00 0.00 42.40 1.90
699 716 6.220726 TGAGATTGACGAGGTCATCATAAA 57.779 37.500 0.00 0.00 42.40 1.40
700 717 6.042777 TGAGATTGACGAGGTCATCATAAAC 58.957 40.000 0.00 0.00 42.40 2.01
701 718 5.043903 AGATTGACGAGGTCATCATAAACG 58.956 41.667 0.00 0.00 42.40 3.60
702 719 2.536365 TGACGAGGTCATCATAAACGC 58.464 47.619 0.00 0.00 37.67 4.84
704 721 1.480954 ACGAGGTCATCATAAACGCCT 59.519 47.619 0.00 0.00 0.00 5.52
708 741 2.132762 GGTCATCATAAACGCCTACGG 58.867 52.381 0.00 0.00 46.04 4.02
709 742 2.132762 GTCATCATAAACGCCTACGGG 58.867 52.381 0.00 0.00 46.04 5.28
712 745 3.118702 TCATCATAAACGCCTACGGGAAA 60.119 43.478 0.00 0.00 46.04 3.13
714 747 2.234414 TCATAAACGCCTACGGGAAAGT 59.766 45.455 0.00 0.00 46.04 2.66
729 762 4.242336 GGAAAGTCTCCTCCCATTGAAT 57.758 45.455 0.00 0.00 41.61 2.57
736 769 5.429762 AGTCTCCTCCCATTGAATGAACATA 59.570 40.000 6.76 0.00 0.00 2.29
741 774 4.209538 TCCCATTGAATGAACATAGCCAG 58.790 43.478 6.76 0.00 0.00 4.85
745 778 4.970662 TTGAATGAACATAGCCAGAAGC 57.029 40.909 0.00 0.00 44.25 3.86
761 794 6.014327 AGCCAGAAGCCTGAAATAAATTCAAA 60.014 34.615 0.00 0.00 43.51 2.69
812 845 5.047188 GCTAAGACTTAATCTCTGGTGAGC 58.953 45.833 0.00 0.00 40.03 4.26
814 847 6.039941 GCTAAGACTTAATCTCTGGTGAGCTA 59.960 42.308 0.00 0.00 40.03 3.32
839 872 0.036022 ACCACAAGGAAGCTCTCAGC 59.964 55.000 0.00 0.00 39.05 4.26
864 897 2.888414 CCTTGGCGAAACTTTTTCCCTA 59.112 45.455 0.00 1.55 0.00 3.53
866 899 3.994204 TGGCGAAACTTTTTCCCTAAC 57.006 42.857 0.00 0.00 0.00 2.34
867 900 2.624364 TGGCGAAACTTTTTCCCTAACC 59.376 45.455 0.00 0.00 0.00 2.85
874 907 3.558033 ACTTTTTCCCTAACCGAGCAAA 58.442 40.909 0.00 0.00 0.00 3.68
880 913 4.513198 TCCCTAACCGAGCAAATTTTTG 57.487 40.909 0.00 0.00 41.03 2.44
964 1263 2.773993 ATTTTTCCCCGAACGCTCTA 57.226 45.000 0.00 0.00 0.00 2.43
1032 1333 2.202756 GCAACGGCGACCTCCTAG 60.203 66.667 16.62 0.00 0.00 3.02
1037 1340 2.262303 CGGCGACCTCCTAGCTAGG 61.262 68.421 30.94 30.94 45.02 3.02
1045 1348 2.224499 ACCTCCTAGCTAGGTACGTAGC 60.224 54.545 33.84 30.98 45.69 3.58
1062 1365 0.176680 AGCAATGGCAGACGAGGTAG 59.823 55.000 0.00 0.00 44.61 3.18
1063 1366 0.108138 GCAATGGCAGACGAGGTAGT 60.108 55.000 0.00 0.00 40.72 2.73
1064 1367 1.136305 GCAATGGCAGACGAGGTAGTA 59.864 52.381 0.00 0.00 40.72 1.82
1136 1445 4.593864 GCGAGGGCGATGGAGGAC 62.594 72.222 0.00 0.00 40.82 3.85
1176 1485 2.283676 GGGAGTCCCTCACCGTGA 60.284 66.667 22.04 0.29 41.34 4.35
1280 1595 2.124570 CAGTTCATCGGCCTGGGG 60.125 66.667 0.00 0.00 0.00 4.96
1550 1865 4.697756 ATCCACCACCACCACGCG 62.698 66.667 3.53 3.53 0.00 6.01
1718 2048 0.179111 TCGTCCTCGCCATGATCAAC 60.179 55.000 0.00 0.00 36.96 3.18
1771 2107 2.659016 CAGGCGGCTCACTCTCAA 59.341 61.111 9.32 0.00 0.00 3.02
1781 2117 2.242926 CTCACTCTCAAGGTGACAGGA 58.757 52.381 0.00 0.00 38.57 3.86
1881 2226 1.662438 GCTCGAGCTGCTCTACCACT 61.662 60.000 29.88 0.00 38.21 4.00
2120 2519 2.594303 CTTGTGGTCAAGGCGCCA 60.594 61.111 31.54 4.59 45.02 5.69
2252 2733 3.697747 CCCACCAACGGCGACCTA 61.698 66.667 16.62 0.00 0.00 3.08
2360 2841 0.974010 TCCGAAACCTGGTCGCCTAT 60.974 55.000 0.00 0.00 37.18 2.57
2540 3026 4.015406 ATGAGCCGGTCGGTGCAA 62.015 61.111 11.25 0.00 37.65 4.08
2609 3095 2.032528 TACGACGGTCGGTGGAGT 59.967 61.111 31.19 13.94 45.59 3.85
2640 3126 1.906994 GCGGTTCATGCGCAAGTACA 61.907 55.000 17.11 0.00 41.68 2.90
2678 3164 2.948720 GCTCACCTTCCTCGCCACT 61.949 63.158 0.00 0.00 0.00 4.00
2823 3309 2.602878 GTTTCTGGATCACGCGAAGTA 58.397 47.619 15.93 0.00 0.00 2.24
2824 3310 2.273370 TTCTGGATCACGCGAAGTAC 57.727 50.000 15.93 0.00 0.00 2.73
2826 3312 0.179171 CTGGATCACGCGAAGTACGT 60.179 55.000 15.93 0.00 46.42 3.57
2854 3340 3.163630 TGCTCAAGCTTTTGGTTTGTC 57.836 42.857 0.00 0.00 42.66 3.18
2863 3349 4.022849 AGCTTTTGGTTTGTCTGCATCTAC 60.023 41.667 0.00 0.00 0.00 2.59
2864 3350 4.466828 CTTTTGGTTTGTCTGCATCTACG 58.533 43.478 0.00 0.00 0.00 3.51
2869 3355 3.120304 GGTTTGTCTGCATCTACGGTTTC 60.120 47.826 0.00 0.00 0.00 2.78
2870 3356 2.380084 TGTCTGCATCTACGGTTTCC 57.620 50.000 0.00 0.00 0.00 3.13
2882 3368 1.292061 CGGTTTCCGGATTTGCGATA 58.708 50.000 4.15 0.00 44.15 2.92
2919 3405 2.136878 CACCTCTCCCTCCATCCGG 61.137 68.421 0.00 0.00 0.00 5.14
2939 3425 0.967887 CACTTCAGCGAGAGGAGGGA 60.968 60.000 0.00 0.00 0.00 4.20
2976 3462 0.761702 TCCCACCGGTAGGAATAGGC 60.762 60.000 20.29 0.00 41.02 3.93
2980 3466 2.701951 CCACCGGTAGGAATAGGCTTAA 59.298 50.000 6.87 0.00 41.02 1.85
3083 3569 1.956477 GGAGGTGCTTCATGTTGTTGT 59.044 47.619 0.00 0.00 0.00 3.32
3101 3587 3.706373 CGGGAGGTGTGTGGAGGG 61.706 72.222 0.00 0.00 0.00 4.30
3102 3588 2.529389 GGGAGGTGTGTGGAGGGT 60.529 66.667 0.00 0.00 0.00 4.34
3103 3589 2.750350 GGAGGTGTGTGGAGGGTG 59.250 66.667 0.00 0.00 0.00 4.61
3104 3590 1.841556 GGAGGTGTGTGGAGGGTGA 60.842 63.158 0.00 0.00 0.00 4.02
3105 3591 1.201429 GGAGGTGTGTGGAGGGTGAT 61.201 60.000 0.00 0.00 0.00 3.06
3106 3592 0.036010 GAGGTGTGTGGAGGGTGATG 60.036 60.000 0.00 0.00 0.00 3.07
3107 3593 0.768221 AGGTGTGTGGAGGGTGATGT 60.768 55.000 0.00 0.00 0.00 3.06
3108 3594 0.606401 GGTGTGTGGAGGGTGATGTG 60.606 60.000 0.00 0.00 0.00 3.21
3109 3595 0.108585 GTGTGTGGAGGGTGATGTGT 59.891 55.000 0.00 0.00 0.00 3.72
3110 3596 0.843309 TGTGTGGAGGGTGATGTGTT 59.157 50.000 0.00 0.00 0.00 3.32
3111 3597 1.238439 GTGTGGAGGGTGATGTGTTG 58.762 55.000 0.00 0.00 0.00 3.33
3112 3598 0.537143 TGTGGAGGGTGATGTGTTGC 60.537 55.000 0.00 0.00 0.00 4.17
3113 3599 1.074775 TGGAGGGTGATGTGTTGCC 59.925 57.895 0.00 0.00 0.00 4.52
3114 3600 1.074775 GGAGGGTGATGTGTTGCCA 59.925 57.895 0.00 0.00 0.00 4.92
3115 3601 0.962356 GGAGGGTGATGTGTTGCCAG 60.962 60.000 0.00 0.00 0.00 4.85
3116 3602 0.036732 GAGGGTGATGTGTTGCCAGA 59.963 55.000 0.00 0.00 0.00 3.86
3117 3603 0.700564 AGGGTGATGTGTTGCCAGAT 59.299 50.000 0.00 0.00 0.00 2.90
3118 3604 1.098050 GGGTGATGTGTTGCCAGATC 58.902 55.000 0.00 0.00 40.77 2.75
3119 3605 1.340405 GGGTGATGTGTTGCCAGATCT 60.340 52.381 0.00 0.00 40.94 2.75
3120 3606 1.741706 GGTGATGTGTTGCCAGATCTG 59.258 52.381 16.24 16.24 40.94 2.90
3130 3616 2.864114 CCAGATCTGGTTGCTGGTG 58.136 57.895 30.55 4.60 45.53 4.17
3131 3617 0.037303 CCAGATCTGGTTGCTGGTGT 59.963 55.000 30.55 0.00 45.53 4.16
3132 3618 1.446907 CAGATCTGGTTGCTGGTGTC 58.553 55.000 15.38 0.00 0.00 3.67
3133 3619 1.002888 CAGATCTGGTTGCTGGTGTCT 59.997 52.381 15.38 0.00 0.00 3.41
3134 3620 2.234661 CAGATCTGGTTGCTGGTGTCTA 59.765 50.000 15.38 0.00 0.00 2.59
3135 3621 2.499289 AGATCTGGTTGCTGGTGTCTAG 59.501 50.000 0.00 0.00 0.00 2.43
3136 3622 1.717032 TCTGGTTGCTGGTGTCTAGT 58.283 50.000 0.00 0.00 0.00 2.57
3137 3623 2.047061 TCTGGTTGCTGGTGTCTAGTT 58.953 47.619 0.00 0.00 0.00 2.24
3138 3624 2.438021 TCTGGTTGCTGGTGTCTAGTTT 59.562 45.455 0.00 0.00 0.00 2.66
3139 3625 3.118038 TCTGGTTGCTGGTGTCTAGTTTT 60.118 43.478 0.00 0.00 0.00 2.43
3140 3626 3.211045 TGGTTGCTGGTGTCTAGTTTTC 58.789 45.455 0.00 0.00 0.00 2.29
3141 3627 2.223377 GGTTGCTGGTGTCTAGTTTTCG 59.777 50.000 0.00 0.00 0.00 3.46
3142 3628 2.870411 GTTGCTGGTGTCTAGTTTTCGT 59.130 45.455 0.00 0.00 0.00 3.85
3143 3629 2.479837 TGCTGGTGTCTAGTTTTCGTG 58.520 47.619 0.00 0.00 0.00 4.35
3144 3630 2.159014 TGCTGGTGTCTAGTTTTCGTGT 60.159 45.455 0.00 0.00 0.00 4.49
3145 3631 2.221055 GCTGGTGTCTAGTTTTCGTGTG 59.779 50.000 0.00 0.00 0.00 3.82
3146 3632 2.206750 TGGTGTCTAGTTTTCGTGTGC 58.793 47.619 0.00 0.00 0.00 4.57
3147 3633 2.206750 GGTGTCTAGTTTTCGTGTGCA 58.793 47.619 0.00 0.00 0.00 4.57
3148 3634 2.806244 GGTGTCTAGTTTTCGTGTGCAT 59.194 45.455 0.00 0.00 0.00 3.96
3149 3635 3.363970 GGTGTCTAGTTTTCGTGTGCATG 60.364 47.826 0.00 0.00 0.00 4.06
3150 3636 3.247648 GTGTCTAGTTTTCGTGTGCATGT 59.752 43.478 0.00 0.00 0.00 3.21
3151 3637 3.493129 TGTCTAGTTTTCGTGTGCATGTC 59.507 43.478 0.00 0.00 0.00 3.06
3152 3638 3.741344 GTCTAGTTTTCGTGTGCATGTCT 59.259 43.478 0.00 0.00 0.00 3.41
3153 3639 4.921515 GTCTAGTTTTCGTGTGCATGTCTA 59.078 41.667 0.00 0.00 0.00 2.59
3154 3640 5.577164 GTCTAGTTTTCGTGTGCATGTCTAT 59.423 40.000 0.00 0.00 0.00 1.98
3155 3641 4.928661 AGTTTTCGTGTGCATGTCTATC 57.071 40.909 0.00 0.00 0.00 2.08
3156 3642 4.569943 AGTTTTCGTGTGCATGTCTATCT 58.430 39.130 0.00 0.00 0.00 1.98
3157 3643 4.627467 AGTTTTCGTGTGCATGTCTATCTC 59.373 41.667 0.00 0.00 0.00 2.75
3158 3644 3.866883 TTCGTGTGCATGTCTATCTCA 57.133 42.857 0.00 0.00 0.00 3.27
3159 3645 3.150848 TCGTGTGCATGTCTATCTCAC 57.849 47.619 0.00 0.00 0.00 3.51
3160 3646 2.755103 TCGTGTGCATGTCTATCTCACT 59.245 45.455 0.00 0.00 0.00 3.41
3161 3647 3.945285 TCGTGTGCATGTCTATCTCACTA 59.055 43.478 0.00 0.00 0.00 2.74
3162 3648 4.035675 TCGTGTGCATGTCTATCTCACTAG 59.964 45.833 0.00 0.00 0.00 2.57
3163 3649 4.047822 GTGTGCATGTCTATCTCACTAGC 58.952 47.826 0.00 0.00 0.00 3.42
3164 3650 3.243201 TGTGCATGTCTATCTCACTAGCG 60.243 47.826 0.00 0.00 0.00 4.26
3165 3651 2.952310 TGCATGTCTATCTCACTAGCGT 59.048 45.455 0.00 0.00 0.00 5.07
3166 3652 3.381590 TGCATGTCTATCTCACTAGCGTT 59.618 43.478 0.00 0.00 0.00 4.84
3167 3653 3.733224 GCATGTCTATCTCACTAGCGTTG 59.267 47.826 0.00 0.00 0.00 4.10
3168 3654 4.734989 GCATGTCTATCTCACTAGCGTTGT 60.735 45.833 0.00 0.00 0.00 3.32
3169 3655 4.617808 TGTCTATCTCACTAGCGTTGTC 57.382 45.455 0.00 0.00 0.00 3.18
3170 3656 3.377485 TGTCTATCTCACTAGCGTTGTCC 59.623 47.826 0.00 0.00 0.00 4.02
3171 3657 2.950309 TCTATCTCACTAGCGTTGTCCC 59.050 50.000 0.00 0.00 0.00 4.46
3172 3658 1.853963 ATCTCACTAGCGTTGTCCCT 58.146 50.000 0.00 0.00 0.00 4.20
3173 3659 1.629043 TCTCACTAGCGTTGTCCCTT 58.371 50.000 0.00 0.00 0.00 3.95
3174 3660 1.272490 TCTCACTAGCGTTGTCCCTTG 59.728 52.381 0.00 0.00 0.00 3.61
3175 3661 0.320374 TCACTAGCGTTGTCCCTTGG 59.680 55.000 0.00 0.00 0.00 3.61
3176 3662 0.320374 CACTAGCGTTGTCCCTTGGA 59.680 55.000 0.00 0.00 0.00 3.53
3177 3663 0.608640 ACTAGCGTTGTCCCTTGGAG 59.391 55.000 0.00 0.00 29.39 3.86
3178 3664 0.895530 CTAGCGTTGTCCCTTGGAGA 59.104 55.000 0.00 0.00 29.39 3.71
3179 3665 0.895530 TAGCGTTGTCCCTTGGAGAG 59.104 55.000 0.00 0.00 29.39 3.20
3180 3666 1.376037 GCGTTGTCCCTTGGAGAGG 60.376 63.158 0.00 0.00 45.86 3.69
3188 3674 4.528674 CTTGGAGAGGATGGCGTG 57.471 61.111 0.00 0.00 0.00 5.34
3189 3675 1.900351 CTTGGAGAGGATGGCGTGA 59.100 57.895 0.00 0.00 0.00 4.35
3190 3676 0.467384 CTTGGAGAGGATGGCGTGAT 59.533 55.000 0.00 0.00 0.00 3.06
3191 3677 0.911769 TTGGAGAGGATGGCGTGATT 59.088 50.000 0.00 0.00 0.00 2.57
3192 3678 0.178767 TGGAGAGGATGGCGTGATTG 59.821 55.000 0.00 0.00 0.00 2.67
3193 3679 0.179000 GGAGAGGATGGCGTGATTGT 59.821 55.000 0.00 0.00 0.00 2.71
3194 3680 1.293924 GAGAGGATGGCGTGATTGTG 58.706 55.000 0.00 0.00 0.00 3.33
3195 3681 0.745845 AGAGGATGGCGTGATTGTGC 60.746 55.000 0.00 0.00 0.00 4.57
3196 3682 1.002257 AGGATGGCGTGATTGTGCA 60.002 52.632 0.00 0.00 0.00 4.57
3197 3683 0.394762 AGGATGGCGTGATTGTGCAT 60.395 50.000 0.00 0.00 0.00 3.96
3198 3684 0.029834 GGATGGCGTGATTGTGCATC 59.970 55.000 0.00 0.00 0.00 3.91
3199 3685 1.019673 GATGGCGTGATTGTGCATCT 58.980 50.000 0.00 0.00 32.34 2.90
3200 3686 1.402968 GATGGCGTGATTGTGCATCTT 59.597 47.619 0.00 0.00 32.34 2.40
3201 3687 0.522626 TGGCGTGATTGTGCATCTTG 59.477 50.000 0.00 0.00 32.34 3.02
3202 3688 0.799534 GGCGTGATTGTGCATCTTGC 60.800 55.000 0.00 0.00 45.29 4.01
3203 3689 0.169672 GCGTGATTGTGCATCTTGCT 59.830 50.000 0.00 0.00 45.31 3.91
3204 3690 1.792993 GCGTGATTGTGCATCTTGCTC 60.793 52.381 0.00 0.00 45.31 4.26
3205 3691 1.202110 CGTGATTGTGCATCTTGCTCC 60.202 52.381 0.00 0.00 45.31 4.70
3206 3692 2.089980 GTGATTGTGCATCTTGCTCCT 58.910 47.619 0.00 0.00 45.31 3.69
3207 3693 2.097142 GTGATTGTGCATCTTGCTCCTC 59.903 50.000 0.00 0.00 45.31 3.71
3208 3694 1.674962 GATTGTGCATCTTGCTCCTCC 59.325 52.381 0.00 0.00 45.31 4.30
3209 3695 0.674581 TTGTGCATCTTGCTCCTCCG 60.675 55.000 0.00 0.00 45.31 4.63
3210 3696 1.817099 GTGCATCTTGCTCCTCCGG 60.817 63.158 0.00 0.00 45.31 5.14
3211 3697 2.899339 GCATCTTGCTCCTCCGGC 60.899 66.667 0.00 0.00 40.96 6.13
3212 3698 2.906458 CATCTTGCTCCTCCGGCT 59.094 61.111 0.00 0.00 0.00 5.52
3213 3699 1.227497 CATCTTGCTCCTCCGGCTC 60.227 63.158 0.00 0.00 0.00 4.70
3214 3700 2.439104 ATCTTGCTCCTCCGGCTCC 61.439 63.158 0.00 0.00 0.00 4.70
3215 3701 3.393970 CTTGCTCCTCCGGCTCCA 61.394 66.667 0.00 0.00 0.00 3.86
3216 3702 3.382803 CTTGCTCCTCCGGCTCCAG 62.383 68.421 0.00 0.00 0.00 3.86
3217 3703 4.704103 TGCTCCTCCGGCTCCAGT 62.704 66.667 0.00 0.00 0.00 4.00
3218 3704 3.394836 GCTCCTCCGGCTCCAGTT 61.395 66.667 0.00 0.00 0.00 3.16
3219 3705 2.960688 GCTCCTCCGGCTCCAGTTT 61.961 63.158 0.00 0.00 0.00 2.66
3220 3706 1.219393 CTCCTCCGGCTCCAGTTTC 59.781 63.158 0.00 0.00 0.00 2.78
3221 3707 2.125512 CCTCCGGCTCCAGTTTCG 60.126 66.667 0.00 0.00 0.00 3.46
3222 3708 2.646175 CCTCCGGCTCCAGTTTCGA 61.646 63.158 0.00 0.00 0.00 3.71
3223 3709 1.517832 CTCCGGCTCCAGTTTCGAT 59.482 57.895 0.00 0.00 0.00 3.59
3224 3710 0.108138 CTCCGGCTCCAGTTTCGATT 60.108 55.000 0.00 0.00 0.00 3.34
3225 3711 0.391130 TCCGGCTCCAGTTTCGATTG 60.391 55.000 0.00 0.00 0.00 2.67
3226 3712 0.391130 CCGGCTCCAGTTTCGATTGA 60.391 55.000 0.00 0.00 0.00 2.57
3227 3713 1.438651 CGGCTCCAGTTTCGATTGAA 58.561 50.000 0.00 0.00 0.00 2.69
3228 3714 1.394917 CGGCTCCAGTTTCGATTGAAG 59.605 52.381 0.00 0.00 35.06 3.02
3229 3715 2.699954 GGCTCCAGTTTCGATTGAAGA 58.300 47.619 0.00 0.00 35.06 2.87
3230 3716 3.074412 GGCTCCAGTTTCGATTGAAGAA 58.926 45.455 0.00 0.00 35.06 2.52
3231 3717 3.126000 GGCTCCAGTTTCGATTGAAGAAG 59.874 47.826 0.00 0.00 35.06 2.85
3232 3718 3.126000 GCTCCAGTTTCGATTGAAGAAGG 59.874 47.826 0.00 0.00 35.06 3.46
3233 3719 4.319177 CTCCAGTTTCGATTGAAGAAGGT 58.681 43.478 0.00 0.00 35.06 3.50
3234 3720 4.714632 TCCAGTTTCGATTGAAGAAGGTT 58.285 39.130 0.00 0.00 35.06 3.50
3235 3721 4.515191 TCCAGTTTCGATTGAAGAAGGTTG 59.485 41.667 0.00 0.00 35.06 3.77
3236 3722 4.320494 CCAGTTTCGATTGAAGAAGGTTGG 60.320 45.833 0.00 0.00 35.06 3.77
3237 3723 3.253432 AGTTTCGATTGAAGAAGGTTGGC 59.747 43.478 0.00 0.00 35.06 4.52
3238 3724 2.859165 TCGATTGAAGAAGGTTGGCT 57.141 45.000 0.00 0.00 0.00 4.75
3239 3725 3.973206 TCGATTGAAGAAGGTTGGCTA 57.027 42.857 0.00 0.00 0.00 3.93
3240 3726 3.861840 TCGATTGAAGAAGGTTGGCTAG 58.138 45.455 0.00 0.00 0.00 3.42
3241 3727 2.352960 CGATTGAAGAAGGTTGGCTAGC 59.647 50.000 6.04 6.04 0.00 3.42
3242 3728 2.200373 TTGAAGAAGGTTGGCTAGCC 57.800 50.000 27.71 27.71 0.00 3.93
3243 3729 1.362224 TGAAGAAGGTTGGCTAGCCT 58.638 50.000 33.07 14.04 39.49 4.58
3245 3731 2.087646 GAAGAAGGTTGGCTAGCCTTG 58.912 52.381 33.07 0.00 46.15 3.61
3246 3732 0.329596 AGAAGGTTGGCTAGCCTTGG 59.670 55.000 33.07 0.00 46.15 3.61
3247 3733 1.304464 AAGGTTGGCTAGCCTTGGC 60.304 57.895 33.07 19.31 44.70 4.52
3248 3734 1.793820 AAGGTTGGCTAGCCTTGGCT 61.794 55.000 33.07 18.74 44.70 4.75
3249 3735 1.304464 GGTTGGCTAGCCTTGGCTT 60.304 57.895 33.07 4.31 36.94 4.35
3250 3736 1.315981 GGTTGGCTAGCCTTGGCTTC 61.316 60.000 33.07 14.90 36.94 3.86
3251 3737 0.609131 GTTGGCTAGCCTTGGCTTCA 60.609 55.000 33.07 8.77 36.94 3.02
3252 3738 0.332632 TTGGCTAGCCTTGGCTTCAT 59.667 50.000 33.07 0.00 36.94 2.57
3253 3739 0.107017 TGGCTAGCCTTGGCTTCATC 60.107 55.000 33.07 3.78 36.94 2.92
3254 3740 1.162800 GGCTAGCCTTGGCTTCATCG 61.163 60.000 27.17 5.11 0.00 3.84
3255 3741 0.179073 GCTAGCCTTGGCTTCATCGA 60.179 55.000 19.93 0.00 0.00 3.59
3256 3742 1.863267 CTAGCCTTGGCTTCATCGAG 58.137 55.000 19.93 6.00 0.00 4.04
3257 3743 0.465705 TAGCCTTGGCTTCATCGAGG 59.534 55.000 19.93 0.00 38.52 4.63
3258 3744 1.221840 GCCTTGGCTTCATCGAGGA 59.778 57.895 4.11 0.00 37.89 3.71
3259 3745 0.813210 GCCTTGGCTTCATCGAGGAG 60.813 60.000 0.00 0.00 37.89 3.69
3260 3746 0.539051 CCTTGGCTTCATCGAGGAGT 59.461 55.000 0.00 0.00 37.89 3.85
3261 3747 1.649664 CTTGGCTTCATCGAGGAGTG 58.350 55.000 0.00 0.00 0.00 3.51
3262 3748 0.976641 TTGGCTTCATCGAGGAGTGT 59.023 50.000 0.00 0.00 0.00 3.55
3263 3749 1.847328 TGGCTTCATCGAGGAGTGTA 58.153 50.000 0.00 0.00 0.00 2.90
3264 3750 2.388735 TGGCTTCATCGAGGAGTGTAT 58.611 47.619 0.00 0.00 0.00 2.29
3265 3751 2.101415 TGGCTTCATCGAGGAGTGTATG 59.899 50.000 0.00 0.00 0.00 2.39
3266 3752 2.362397 GGCTTCATCGAGGAGTGTATGA 59.638 50.000 0.00 0.00 0.00 2.15
3267 3753 3.551863 GGCTTCATCGAGGAGTGTATGAG 60.552 52.174 0.00 0.00 30.53 2.90
3268 3754 3.551863 GCTTCATCGAGGAGTGTATGAGG 60.552 52.174 0.00 0.00 30.53 3.86
3269 3755 3.298686 TCATCGAGGAGTGTATGAGGT 57.701 47.619 0.00 0.00 0.00 3.85
3270 3756 3.632333 TCATCGAGGAGTGTATGAGGTT 58.368 45.455 0.00 0.00 0.00 3.50
3271 3757 4.023980 TCATCGAGGAGTGTATGAGGTTT 58.976 43.478 0.00 0.00 0.00 3.27
3272 3758 5.198207 TCATCGAGGAGTGTATGAGGTTTA 58.802 41.667 0.00 0.00 0.00 2.01
3273 3759 5.833667 TCATCGAGGAGTGTATGAGGTTTAT 59.166 40.000 0.00 0.00 0.00 1.40
3274 3760 7.002276 TCATCGAGGAGTGTATGAGGTTTATA 58.998 38.462 0.00 0.00 0.00 0.98
3275 3761 7.670140 TCATCGAGGAGTGTATGAGGTTTATAT 59.330 37.037 0.00 0.00 0.00 0.86
3276 3762 7.450124 TCGAGGAGTGTATGAGGTTTATATC 57.550 40.000 0.00 0.00 0.00 1.63
3277 3763 6.433404 TCGAGGAGTGTATGAGGTTTATATCC 59.567 42.308 0.00 0.00 0.00 2.59
3278 3764 6.350277 CGAGGAGTGTATGAGGTTTATATCCC 60.350 46.154 0.00 0.00 0.00 3.85
3279 3765 5.785940 AGGAGTGTATGAGGTTTATATCCCC 59.214 44.000 0.00 0.00 0.00 4.81
3280 3766 5.045797 GGAGTGTATGAGGTTTATATCCCCC 60.046 48.000 0.00 0.00 0.00 5.40
3294 3780 4.201122 CCCCCAGCTCCATCTGCC 62.201 72.222 0.00 0.00 32.87 4.85
3295 3781 3.095163 CCCCAGCTCCATCTGCCT 61.095 66.667 0.00 0.00 32.87 4.75
3296 3782 2.192443 CCCAGCTCCATCTGCCTG 59.808 66.667 0.00 0.00 32.87 4.85
3297 3783 2.192443 CCAGCTCCATCTGCCTGG 59.808 66.667 0.00 0.00 37.66 4.45
3298 3784 2.372890 CCAGCTCCATCTGCCTGGA 61.373 63.158 0.00 0.00 43.09 3.86
3299 3785 1.706995 CCAGCTCCATCTGCCTGGAT 61.707 60.000 0.00 0.00 44.23 3.41
3300 3786 0.250381 CAGCTCCATCTGCCTGGATC 60.250 60.000 0.00 0.00 44.23 3.36
3301 3787 0.400237 AGCTCCATCTGCCTGGATCT 60.400 55.000 0.00 0.00 44.23 2.75
3302 3788 1.132913 AGCTCCATCTGCCTGGATCTA 60.133 52.381 0.00 0.00 44.23 1.98
3303 3789 1.275856 GCTCCATCTGCCTGGATCTAG 59.724 57.143 0.00 0.00 44.23 2.43
3304 3790 1.901159 CTCCATCTGCCTGGATCTAGG 59.099 57.143 20.42 20.42 44.23 3.02
3305 3791 1.505098 TCCATCTGCCTGGATCTAGGA 59.495 52.381 28.07 12.29 40.43 2.94
3306 3792 1.622811 CCATCTGCCTGGATCTAGGAC 59.377 57.143 28.07 18.55 40.42 3.85
3307 3793 1.271934 CATCTGCCTGGATCTAGGACG 59.728 57.143 28.07 16.78 40.42 4.79
3308 3794 0.259065 TCTGCCTGGATCTAGGACGT 59.741 55.000 28.07 0.00 40.42 4.34
3309 3795 1.115467 CTGCCTGGATCTAGGACGTT 58.885 55.000 28.07 0.00 40.42 3.99
3310 3796 1.067821 CTGCCTGGATCTAGGACGTTC 59.932 57.143 28.07 10.66 40.42 3.95
3311 3797 1.342076 TGCCTGGATCTAGGACGTTCT 60.342 52.381 28.07 0.00 40.42 3.01
3312 3798 1.757699 GCCTGGATCTAGGACGTTCTT 59.242 52.381 28.07 0.00 40.42 2.52
3313 3799 2.223852 GCCTGGATCTAGGACGTTCTTC 60.224 54.545 28.07 4.41 40.42 2.87
3314 3800 2.362717 CCTGGATCTAGGACGTTCTTCC 59.637 54.545 20.10 3.52 40.42 3.46
3316 3802 3.288964 TGGATCTAGGACGTTCTTCCTC 58.711 50.000 13.16 3.31 42.98 3.71
3317 3803 2.291190 GGATCTAGGACGTTCTTCCTCG 59.709 54.545 0.00 0.00 42.98 4.63
3318 3804 2.486472 TCTAGGACGTTCTTCCTCGT 57.514 50.000 0.00 0.00 42.98 4.18
3319 3805 2.787994 TCTAGGACGTTCTTCCTCGTT 58.212 47.619 0.00 0.00 42.98 3.85
3320 3806 2.746362 TCTAGGACGTTCTTCCTCGTTC 59.254 50.000 0.00 0.00 42.98 3.95
3321 3807 0.602060 AGGACGTTCTTCCTCGTTCC 59.398 55.000 0.00 0.00 42.98 3.62
3322 3808 0.731855 GGACGTTCTTCCTCGTTCCG 60.732 60.000 0.00 0.00 40.39 4.30
3323 3809 0.731855 GACGTTCTTCCTCGTTCCGG 60.732 60.000 0.00 0.00 40.39 5.14
3324 3810 1.288127 CGTTCTTCCTCGTTCCGGT 59.712 57.895 0.00 0.00 0.00 5.28
3325 3811 1.007336 CGTTCTTCCTCGTTCCGGTG 61.007 60.000 0.00 0.00 0.00 4.94
3326 3812 0.669625 GTTCTTCCTCGTTCCGGTGG 60.670 60.000 0.00 0.00 0.00 4.61
3327 3813 1.117142 TTCTTCCTCGTTCCGGTGGT 61.117 55.000 0.00 0.00 0.00 4.16
3328 3814 1.374252 CTTCCTCGTTCCGGTGGTG 60.374 63.158 0.00 0.00 0.00 4.17
3329 3815 3.524648 TTCCTCGTTCCGGTGGTGC 62.525 63.158 0.00 0.00 0.00 5.01
3330 3816 4.003788 CCTCGTTCCGGTGGTGCT 62.004 66.667 0.00 0.00 0.00 4.40
3331 3817 2.030562 CTCGTTCCGGTGGTGCTT 59.969 61.111 0.00 0.00 0.00 3.91
3332 3818 1.290955 CTCGTTCCGGTGGTGCTTA 59.709 57.895 0.00 0.00 0.00 3.09
3333 3819 0.320073 CTCGTTCCGGTGGTGCTTAA 60.320 55.000 0.00 0.00 0.00 1.85
3334 3820 0.322322 TCGTTCCGGTGGTGCTTAAT 59.678 50.000 0.00 0.00 0.00 1.40
3335 3821 0.446222 CGTTCCGGTGGTGCTTAATG 59.554 55.000 0.00 0.00 0.00 1.90
3336 3822 1.530323 GTTCCGGTGGTGCTTAATGT 58.470 50.000 0.00 0.00 0.00 2.71
3337 3823 1.883926 GTTCCGGTGGTGCTTAATGTT 59.116 47.619 0.00 0.00 0.00 2.71
3338 3824 1.529226 TCCGGTGGTGCTTAATGTTG 58.471 50.000 0.00 0.00 0.00 3.33
3339 3825 1.202830 TCCGGTGGTGCTTAATGTTGT 60.203 47.619 0.00 0.00 0.00 3.32
3340 3826 1.611491 CCGGTGGTGCTTAATGTTGTT 59.389 47.619 0.00 0.00 0.00 2.83
3341 3827 2.606795 CCGGTGGTGCTTAATGTTGTTG 60.607 50.000 0.00 0.00 0.00 3.33
3342 3828 2.403259 GGTGGTGCTTAATGTTGTTGC 58.597 47.619 0.00 0.00 0.00 4.17
3343 3829 2.223923 GGTGGTGCTTAATGTTGTTGCA 60.224 45.455 0.00 0.00 0.00 4.08
3344 3830 3.052036 GTGGTGCTTAATGTTGTTGCAG 58.948 45.455 0.00 0.00 34.15 4.41
3345 3831 2.035704 TGGTGCTTAATGTTGTTGCAGG 59.964 45.455 0.00 0.00 34.15 4.85
3346 3832 2.610232 GGTGCTTAATGTTGTTGCAGGG 60.610 50.000 0.00 0.00 34.15 4.45
3347 3833 2.295909 GTGCTTAATGTTGTTGCAGGGA 59.704 45.455 0.00 0.00 34.15 4.20
3348 3834 2.557924 TGCTTAATGTTGTTGCAGGGAG 59.442 45.455 0.00 0.00 0.00 4.30
3349 3835 2.094545 GCTTAATGTTGTTGCAGGGAGG 60.095 50.000 0.00 0.00 0.00 4.30
3350 3836 2.969821 TAATGTTGTTGCAGGGAGGT 57.030 45.000 0.00 0.00 0.00 3.85
3351 3837 1.331214 AATGTTGTTGCAGGGAGGTG 58.669 50.000 0.00 0.00 0.00 4.00
3352 3838 0.185901 ATGTTGTTGCAGGGAGGTGT 59.814 50.000 0.00 0.00 0.00 4.16
3353 3839 0.751277 TGTTGTTGCAGGGAGGTGTG 60.751 55.000 0.00 0.00 0.00 3.82
3354 3840 0.751643 GTTGTTGCAGGGAGGTGTGT 60.752 55.000 0.00 0.00 0.00 3.72
3355 3841 0.751277 TTGTTGCAGGGAGGTGTGTG 60.751 55.000 0.00 0.00 0.00 3.82
3356 3842 1.898574 GTTGCAGGGAGGTGTGTGG 60.899 63.158 0.00 0.00 0.00 4.17
3357 3843 2.075566 TTGCAGGGAGGTGTGTGGA 61.076 57.895 0.00 0.00 0.00 4.02
3358 3844 2.055689 TTGCAGGGAGGTGTGTGGAG 62.056 60.000 0.00 0.00 0.00 3.86
3359 3845 3.072476 CAGGGAGGTGTGTGGAGG 58.928 66.667 0.00 0.00 0.00 4.30
3360 3846 2.203998 AGGGAGGTGTGTGGAGGG 60.204 66.667 0.00 0.00 0.00 4.30
3369 3855 0.843309 TGTGTGGAGGGTGATGTGTT 59.157 50.000 0.00 0.00 0.00 3.32
3374 3860 0.404040 GGAGGGTGATGTGTTCCCAA 59.596 55.000 0.00 0.00 43.31 4.12
3386 3872 0.243636 GTTCCCAAATCTGGTTGCCG 59.756 55.000 0.00 0.00 41.72 5.69
3393 3879 0.981183 AATCTGGTTGCCGGTGTCTA 59.019 50.000 1.90 0.00 0.00 2.59
3394 3880 0.981183 ATCTGGTTGCCGGTGTCTAA 59.019 50.000 1.90 0.00 0.00 2.10
3398 3884 1.134037 TGGTTGCCGGTGTCTAAGTTT 60.134 47.619 1.90 0.00 0.00 2.66
3465 3951 1.401931 GCGTGATTGTGCATCTTGCTT 60.402 47.619 0.00 0.00 45.31 3.91
3470 3956 2.275134 TTGTGCATCTTGCTTCTCCA 57.725 45.000 0.00 0.00 45.31 3.86
3471 3957 1.527034 TGTGCATCTTGCTTCTCCAC 58.473 50.000 0.00 0.00 45.31 4.02
3472 3958 1.072806 TGTGCATCTTGCTTCTCCACT 59.927 47.619 0.00 0.00 45.31 4.00
3474 3960 2.555757 GTGCATCTTGCTTCTCCACTTT 59.444 45.455 0.00 0.00 45.31 2.66
3476 3962 2.816087 GCATCTTGCTTCTCCACTTTCA 59.184 45.455 0.00 0.00 40.96 2.69
3477 3963 3.254166 GCATCTTGCTTCTCCACTTTCAA 59.746 43.478 0.00 0.00 40.96 2.69
3478 3964 4.082354 GCATCTTGCTTCTCCACTTTCAAT 60.082 41.667 0.00 0.00 40.96 2.57
3479 3965 5.566230 GCATCTTGCTTCTCCACTTTCAATT 60.566 40.000 0.00 0.00 40.96 2.32
3480 3966 5.443185 TCTTGCTTCTCCACTTTCAATTG 57.557 39.130 0.00 0.00 0.00 2.32
3481 3967 5.132502 TCTTGCTTCTCCACTTTCAATTGA 58.867 37.500 3.38 3.38 0.00 2.57
3482 3968 5.593909 TCTTGCTTCTCCACTTTCAATTGAA 59.406 36.000 16.91 16.91 0.00 2.69
3483 3969 5.443185 TGCTTCTCCACTTTCAATTGAAG 57.557 39.130 19.64 15.83 35.21 3.02
3484 3970 5.132502 TGCTTCTCCACTTTCAATTGAAGA 58.867 37.500 19.64 12.97 35.21 2.87
3485 3971 5.593909 TGCTTCTCCACTTTCAATTGAAGAA 59.406 36.000 19.64 16.60 35.21 2.52
3486 3972 6.148264 GCTTCTCCACTTTCAATTGAAGAAG 58.852 40.000 26.70 26.70 34.61 2.85
3487 3973 6.639632 TTCTCCACTTTCAATTGAAGAAGG 57.360 37.500 19.64 20.02 35.21 3.46
3488 3974 5.694995 TCTCCACTTTCAATTGAAGAAGGT 58.305 37.500 19.64 14.18 35.96 3.50
3489 3975 6.129179 TCTCCACTTTCAATTGAAGAAGGTT 58.871 36.000 19.64 0.00 33.68 3.50
3490 3976 6.039717 TCTCCACTTTCAATTGAAGAAGGTTG 59.960 38.462 19.64 16.85 33.68 3.77
3491 3977 5.068987 TCCACTTTCAATTGAAGAAGGTTGG 59.931 40.000 19.64 17.70 33.68 3.77
3492 3978 4.746611 CACTTTCAATTGAAGAAGGTTGGC 59.253 41.667 19.64 0.00 33.68 4.52
3493 3979 4.651045 ACTTTCAATTGAAGAAGGTTGGCT 59.349 37.500 19.64 0.00 32.23 4.75
3494 3980 5.833131 ACTTTCAATTGAAGAAGGTTGGCTA 59.167 36.000 19.64 1.35 32.23 3.93
3495 3981 5.964958 TTCAATTGAAGAAGGTTGGCTAG 57.035 39.130 16.91 0.00 0.00 3.42
3496 3982 3.758554 TCAATTGAAGAAGGTTGGCTAGC 59.241 43.478 6.04 6.04 0.00 3.42
3497 3983 2.200373 TTGAAGAAGGTTGGCTAGCC 57.800 50.000 27.71 27.71 0.00 3.93
3498 3984 1.362224 TGAAGAAGGTTGGCTAGCCT 58.638 50.000 33.07 14.04 39.49 4.58
3499 3985 1.279271 TGAAGAAGGTTGGCTAGCCTC 59.721 52.381 33.07 24.25 36.37 4.70
3500 3986 0.250513 AAGAAGGTTGGCTAGCCTCG 59.749 55.000 33.07 0.00 36.37 4.63
3501 3987 1.153349 GAAGGTTGGCTAGCCTCGG 60.153 63.158 33.07 0.00 36.37 4.63
3502 3988 3.330992 AAGGTTGGCTAGCCTCGGC 62.331 63.158 33.07 19.31 36.37 5.54
3515 4001 2.261671 TCGGCTTTGTCGAGGAGC 59.738 61.111 6.15 6.15 33.73 4.70
3516 4002 2.048222 CGGCTTTGTCGAGGAGCA 60.048 61.111 14.31 0.00 38.14 4.26
3517 4003 1.448540 CGGCTTTGTCGAGGAGCAT 60.449 57.895 14.31 0.00 38.14 3.79
3518 4004 1.021390 CGGCTTTGTCGAGGAGCATT 61.021 55.000 14.31 0.00 38.14 3.56
3519 4005 1.168714 GGCTTTGTCGAGGAGCATTT 58.831 50.000 14.31 0.00 38.14 2.32
3520 4006 1.135575 GGCTTTGTCGAGGAGCATTTG 60.136 52.381 14.31 0.00 38.14 2.32
3521 4007 1.806542 GCTTTGTCGAGGAGCATTTGA 59.193 47.619 9.11 0.00 36.45 2.69
3522 4008 2.159599 GCTTTGTCGAGGAGCATTTGAG 60.160 50.000 9.11 0.00 36.45 3.02
3523 4009 2.099141 TTGTCGAGGAGCATTTGAGG 57.901 50.000 0.00 0.00 0.00 3.86
3524 4010 0.976641 TGTCGAGGAGCATTTGAGGT 59.023 50.000 0.00 0.00 0.00 3.85
3525 4011 1.347707 TGTCGAGGAGCATTTGAGGTT 59.652 47.619 0.00 0.00 0.00 3.50
3526 4012 2.224523 TGTCGAGGAGCATTTGAGGTTT 60.225 45.455 0.00 0.00 0.00 3.27
3527 4013 2.160417 GTCGAGGAGCATTTGAGGTTTG 59.840 50.000 0.00 0.00 0.00 2.93
3528 4014 2.038426 TCGAGGAGCATTTGAGGTTTGA 59.962 45.455 0.00 0.00 0.00 2.69
3529 4015 3.012518 CGAGGAGCATTTGAGGTTTGAT 58.987 45.455 0.00 0.00 0.00 2.57
3530 4016 3.064545 CGAGGAGCATTTGAGGTTTGATC 59.935 47.826 0.00 0.00 0.00 2.92
3531 4017 3.359950 AGGAGCATTTGAGGTTTGATCC 58.640 45.455 0.00 0.00 44.37 3.36
3532 4018 2.428530 GGAGCATTTGAGGTTTGATCCC 59.571 50.000 0.00 0.00 39.47 3.85
3575 4061 1.128188 AGGACGTTCTCAAGGCCCTT 61.128 55.000 0.00 0.00 0.00 3.95
3577 4063 0.673956 GACGTTCTCAAGGCCCTTCC 60.674 60.000 0.00 0.00 0.00 3.46
3618 4104 1.274167 CACATTGCAGCCACCAGAATT 59.726 47.619 0.00 0.00 0.00 2.17
3635 4121 5.640189 AGAATTTTTCTGGTCAGCATCAG 57.360 39.130 0.00 0.00 38.91 2.90
3638 4124 0.329261 TTTCTGGTCAGCATCAGGGG 59.671 55.000 0.00 0.00 0.00 4.79
3670 4156 9.949174 CGACCATTGAAATAATGTTATTCATGA 57.051 29.630 0.00 0.00 36.81 3.07
3687 4173 2.346766 TGATTTCATGGTGATCCCGG 57.653 50.000 0.00 0.00 35.15 5.73
3692 4178 2.042095 ATGGTGATCCCGGGGTCA 59.958 61.111 33.28 33.28 35.15 4.02
3750 4236 1.906574 ACGTATGCAAGGAAGAAGGGA 59.093 47.619 0.00 0.00 0.00 4.20
3752 4238 3.134458 CGTATGCAAGGAAGAAGGGATC 58.866 50.000 0.00 0.00 0.00 3.36
3754 4240 3.744940 ATGCAAGGAAGAAGGGATCAA 57.255 42.857 0.00 0.00 0.00 2.57
3757 4243 3.573967 TGCAAGGAAGAAGGGATCAAAAC 59.426 43.478 0.00 0.00 0.00 2.43
3761 4247 5.180810 AGGAAGAAGGGATCAAAACCTAC 57.819 43.478 0.00 0.00 35.64 3.18
3781 4267 9.574516 AACCTACATGGACTTGGATATATTTTC 57.425 33.333 0.00 0.00 39.71 2.29
3885 4374 7.389053 CCCTGCTCAACTCATTAGGATATTAAC 59.611 40.741 0.00 0.00 0.00 2.01
3886 4375 8.153550 CCTGCTCAACTCATTAGGATATTAACT 58.846 37.037 0.00 0.00 0.00 2.24
3887 4376 9.553064 CTGCTCAACTCATTAGGATATTAACTT 57.447 33.333 0.00 0.00 0.00 2.66
3889 4378 9.547753 GCTCAACTCATTAGGATATTAACTTCA 57.452 33.333 0.00 0.00 0.00 3.02
3935 4587 2.826674 TTAGGCCTTCAGGGATTTGG 57.173 50.000 12.58 0.00 37.23 3.28
3945 4597 0.846427 AGGGATTTGGCCTCCAGTGA 60.846 55.000 11.42 0.00 33.81 3.41
3946 4598 0.259938 GGGATTTGGCCTCCAGTGAT 59.740 55.000 11.42 0.00 33.81 3.06
3958 4610 3.307975 CCTCCAGTGATGAGACAACCAAT 60.308 47.826 0.00 0.00 31.26 3.16
3970 4622 1.196911 CAACCAATGCCCATCACCAT 58.803 50.000 0.00 0.00 0.00 3.55
4003 4656 2.100916 GGTCGACTAGAGCCAAGCATTA 59.899 50.000 16.46 0.00 41.28 1.90
4038 4691 2.568090 GCACGTTCAATGCCCAGG 59.432 61.111 0.00 0.00 37.08 4.45
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 3.410631 TTATGGACGTGTTGGATGTGT 57.589 42.857 0.00 0.00 0.00 3.72
3 4 4.584874 TCATTTATGGACGTGTTGGATGT 58.415 39.130 0.00 0.00 0.00 3.06
4 5 5.559427 TTCATTTATGGACGTGTTGGATG 57.441 39.130 0.00 0.00 0.00 3.51
5 6 6.015856 TGTTTTCATTTATGGACGTGTTGGAT 60.016 34.615 0.00 0.00 0.00 3.41
6 7 5.299531 TGTTTTCATTTATGGACGTGTTGGA 59.700 36.000 0.00 0.00 0.00 3.53
7 8 5.524284 TGTTTTCATTTATGGACGTGTTGG 58.476 37.500 0.00 0.00 0.00 3.77
8 9 8.909708 ATATGTTTTCATTTATGGACGTGTTG 57.090 30.769 0.00 0.00 41.25 3.33
34 35 9.529325 GCTTTCTTGGTACTTTTTCAGTAAAAT 57.471 29.630 0.00 0.00 39.86 1.82
35 36 8.524487 TGCTTTCTTGGTACTTTTTCAGTAAAA 58.476 29.630 0.00 0.00 39.86 1.52
36 37 8.057536 TGCTTTCTTGGTACTTTTTCAGTAAA 57.942 30.769 0.00 0.00 39.86 2.01
37 38 7.633193 TGCTTTCTTGGTACTTTTTCAGTAA 57.367 32.000 0.00 0.00 39.86 2.24
38 39 7.338449 ACTTGCTTTCTTGGTACTTTTTCAGTA 59.662 33.333 0.00 0.00 36.88 2.74
39 40 6.152831 ACTTGCTTTCTTGGTACTTTTTCAGT 59.847 34.615 0.00 0.00 39.87 3.41
40 41 6.564328 ACTTGCTTTCTTGGTACTTTTTCAG 58.436 36.000 0.00 0.00 0.00 3.02
41 42 6.377146 AGACTTGCTTTCTTGGTACTTTTTCA 59.623 34.615 0.00 0.00 0.00 2.69
42 43 6.796426 AGACTTGCTTTCTTGGTACTTTTTC 58.204 36.000 0.00 0.00 0.00 2.29
43 44 6.775594 AGACTTGCTTTCTTGGTACTTTTT 57.224 33.333 0.00 0.00 0.00 1.94
44 45 7.773690 TCTTAGACTTGCTTTCTTGGTACTTTT 59.226 33.333 0.00 0.00 0.00 2.27
45 46 7.280356 TCTTAGACTTGCTTTCTTGGTACTTT 58.720 34.615 0.00 0.00 0.00 2.66
50 51 5.006386 CCATCTTAGACTTGCTTTCTTGGT 58.994 41.667 0.00 0.00 0.00 3.67
51 52 5.123027 GTCCATCTTAGACTTGCTTTCTTGG 59.877 44.000 0.00 0.00 0.00 3.61
77 78 3.443681 CGTGCAATTTTTGGATAGGACCT 59.556 43.478 0.00 0.00 32.24 3.85
85 86 0.683973 ATGGCCGTGCAATTTTTGGA 59.316 45.000 0.00 0.00 0.00 3.53
90 91 0.244450 CACTGATGGCCGTGCAATTT 59.756 50.000 0.00 0.00 0.00 1.82
98 99 0.749049 TCTCTCATCACTGATGGCCG 59.251 55.000 17.33 7.96 40.15 6.13
106 107 8.438373 ACATCATGGATATTTTCTCTCATCACT 58.562 33.333 0.00 0.00 0.00 3.41
107 108 8.618702 ACATCATGGATATTTTCTCTCATCAC 57.381 34.615 0.00 0.00 0.00 3.06
122 123 9.693739 CCTCTTACTAGAGTATACATCATGGAT 57.306 37.037 5.50 0.00 45.40 3.41
123 124 7.612244 GCCTCTTACTAGAGTATACATCATGGA 59.388 40.741 5.50 0.00 45.40 3.41
135 137 1.957877 GATGGCGCCTCTTACTAGAGT 59.042 52.381 29.70 0.00 45.40 3.24
182 188 5.717178 AGGTTATCGATGTATGTATGCCTCT 59.283 40.000 8.54 0.00 0.00 3.69
183 189 5.807520 CAGGTTATCGATGTATGTATGCCTC 59.192 44.000 8.54 0.00 0.00 4.70
188 194 6.070824 TCCATGCAGGTTATCGATGTATGTAT 60.071 38.462 8.54 4.08 35.90 2.29
194 200 3.134623 TCTTCCATGCAGGTTATCGATGT 59.865 43.478 8.54 0.00 39.02 3.06
195 201 3.732212 TCTTCCATGCAGGTTATCGATG 58.268 45.455 8.54 0.00 39.02 3.84
196 202 4.040829 TCATCTTCCATGCAGGTTATCGAT 59.959 41.667 2.16 2.16 39.02 3.59
197 203 3.387699 TCATCTTCCATGCAGGTTATCGA 59.612 43.478 0.00 0.00 39.02 3.59
198 204 3.732212 TCATCTTCCATGCAGGTTATCG 58.268 45.455 0.00 0.00 39.02 2.92
199 205 5.591877 AGTTTCATCTTCCATGCAGGTTATC 59.408 40.000 0.00 0.00 39.02 1.75
200 206 5.513233 AGTTTCATCTTCCATGCAGGTTAT 58.487 37.500 0.00 0.00 39.02 1.89
201 207 4.922206 AGTTTCATCTTCCATGCAGGTTA 58.078 39.130 0.00 0.00 39.02 2.85
202 208 3.771216 AGTTTCATCTTCCATGCAGGTT 58.229 40.909 0.00 0.00 39.02 3.50
203 209 3.446442 AGTTTCATCTTCCATGCAGGT 57.554 42.857 0.00 0.00 39.02 4.00
204 210 4.796038 AAAGTTTCATCTTCCATGCAGG 57.204 40.909 0.00 0.00 39.47 4.85
205 211 5.987347 ACAAAAAGTTTCATCTTCCATGCAG 59.013 36.000 0.00 0.00 0.00 4.41
206 212 5.916318 ACAAAAAGTTTCATCTTCCATGCA 58.084 33.333 0.00 0.00 0.00 3.96
207 213 6.849588 AACAAAAAGTTTCATCTTCCATGC 57.150 33.333 0.00 0.00 37.03 4.06
222 228 8.610896 TCATGCTATGGTTTTGAAAACAAAAAG 58.389 29.630 20.87 13.01 39.36 2.27
228 234 8.382875 GCTTTATCATGCTATGGTTTTGAAAAC 58.617 33.333 12.14 12.14 0.00 2.43
230 236 7.041107 GGCTTTATCATGCTATGGTTTTGAAA 58.959 34.615 0.00 0.00 0.00 2.69
231 237 6.154192 TGGCTTTATCATGCTATGGTTTTGAA 59.846 34.615 0.00 0.00 0.00 2.69
233 239 5.904941 TGGCTTTATCATGCTATGGTTTTG 58.095 37.500 0.00 0.00 0.00 2.44
257 263 7.913297 GCTTGTGCTTCCGTATCATTAAAATTA 59.087 33.333 0.00 0.00 36.03 1.40
277 283 0.664166 ATTTTGCTTCGCCGCTTGTG 60.664 50.000 0.00 0.00 0.00 3.33
281 287 1.305219 TGCTATTTTGCTTCGCCGCT 61.305 50.000 0.00 0.00 0.00 5.52
285 291 1.135803 TCGGTTGCTATTTTGCTTCGC 60.136 47.619 0.00 0.00 0.00 4.70
286 292 2.892373 TCGGTTGCTATTTTGCTTCG 57.108 45.000 0.00 0.00 0.00 3.79
290 296 1.544246 AGGGTTCGGTTGCTATTTTGC 59.456 47.619 0.00 0.00 0.00 3.68
311 317 1.152440 AACCAAATGTTCCCGCCCA 60.152 52.632 0.00 0.00 28.45 5.36
319 325 7.402054 TCATATACACTCAGGAACCAAATGTT 58.598 34.615 0.00 0.00 40.81 2.71
321 327 7.864108 TTCATATACACTCAGGAACCAAATG 57.136 36.000 0.00 0.00 0.00 2.32
322 328 8.877864 TTTTCATATACACTCAGGAACCAAAT 57.122 30.769 0.00 0.00 0.00 2.32
394 409 7.873699 ACCAATACAATAGAAGGGCTAGTAT 57.126 36.000 0.00 0.00 31.33 2.12
414 429 6.839657 TCCCTTGGTCAAACTTTTTATACCAA 59.160 34.615 13.23 13.23 42.94 3.67
576 593 2.878406 GGCATCTGTGTTTGTACTGTGT 59.122 45.455 0.00 0.00 0.00 3.72
579 596 2.226437 GTGGGCATCTGTGTTTGTACTG 59.774 50.000 0.00 0.00 0.00 2.74
590 607 2.283298 GTGAGTGTATGTGGGCATCTG 58.717 52.381 0.00 0.00 36.58 2.90
614 631 3.389329 AGGAGTAGGGTGTGCATTCATAG 59.611 47.826 0.00 0.00 0.00 2.23
615 632 3.384168 AGGAGTAGGGTGTGCATTCATA 58.616 45.455 0.00 0.00 0.00 2.15
616 633 2.200081 AGGAGTAGGGTGTGCATTCAT 58.800 47.619 0.00 0.00 0.00 2.57
617 634 1.656587 AGGAGTAGGGTGTGCATTCA 58.343 50.000 0.00 0.00 0.00 2.57
618 635 5.246203 TCATATAGGAGTAGGGTGTGCATTC 59.754 44.000 0.00 0.00 0.00 2.67
619 636 5.155161 TCATATAGGAGTAGGGTGTGCATT 58.845 41.667 0.00 0.00 0.00 3.56
620 637 4.752063 TCATATAGGAGTAGGGTGTGCAT 58.248 43.478 0.00 0.00 0.00 3.96
621 638 4.193240 TCATATAGGAGTAGGGTGTGCA 57.807 45.455 0.00 0.00 0.00 4.57
622 639 4.344102 TGTTCATATAGGAGTAGGGTGTGC 59.656 45.833 0.00 0.00 0.00 4.57
623 640 5.221461 GGTGTTCATATAGGAGTAGGGTGTG 60.221 48.000 0.00 0.00 0.00 3.82
624 641 4.900054 GGTGTTCATATAGGAGTAGGGTGT 59.100 45.833 0.00 0.00 0.00 4.16
625 642 5.148502 AGGTGTTCATATAGGAGTAGGGTG 58.851 45.833 0.00 0.00 0.00 4.61
626 643 5.395611 GAGGTGTTCATATAGGAGTAGGGT 58.604 45.833 0.00 0.00 0.00 4.34
627 644 4.773149 GGAGGTGTTCATATAGGAGTAGGG 59.227 50.000 0.00 0.00 0.00 3.53
628 645 4.459685 CGGAGGTGTTCATATAGGAGTAGG 59.540 50.000 0.00 0.00 0.00 3.18
629 646 5.314529 TCGGAGGTGTTCATATAGGAGTAG 58.685 45.833 0.00 0.00 0.00 2.57
630 647 5.314718 TCGGAGGTGTTCATATAGGAGTA 57.685 43.478 0.00 0.00 0.00 2.59
631 648 4.180377 TCGGAGGTGTTCATATAGGAGT 57.820 45.455 0.00 0.00 0.00 3.85
632 649 5.531122 TTTCGGAGGTGTTCATATAGGAG 57.469 43.478 0.00 0.00 0.00 3.69
633 650 6.781014 AGTATTTCGGAGGTGTTCATATAGGA 59.219 38.462 0.00 0.00 0.00 2.94
634 651 6.868864 CAGTATTTCGGAGGTGTTCATATAGG 59.131 42.308 0.00 0.00 0.00 2.57
635 652 7.658261 TCAGTATTTCGGAGGTGTTCATATAG 58.342 38.462 0.00 0.00 0.00 1.31
636 653 7.591421 TCAGTATTTCGGAGGTGTTCATATA 57.409 36.000 0.00 0.00 0.00 0.86
637 654 6.479972 TCAGTATTTCGGAGGTGTTCATAT 57.520 37.500 0.00 0.00 0.00 1.78
651 668 3.585862 TCTTGTGTCGGCTCAGTATTTC 58.414 45.455 0.00 0.00 0.00 2.17
656 673 1.261480 AGATCTTGTGTCGGCTCAGT 58.739 50.000 0.00 0.00 0.00 3.41
671 688 4.377839 TGACCTCGTCAATCTCAAGATC 57.622 45.455 0.00 0.00 39.78 2.75
688 705 2.132762 CCGTAGGCGTTTATGATGACC 58.867 52.381 0.00 0.00 46.14 4.02
700 717 3.215345 GAGGAGACTTTCCCGTAGGCG 62.215 61.905 0.00 0.00 46.97 5.52
701 718 0.460722 GAGGAGACTTTCCCGTAGGC 59.539 60.000 0.00 0.00 46.97 3.93
709 742 4.848357 TCATTCAATGGGAGGAGACTTTC 58.152 43.478 0.00 0.00 44.43 2.62
714 747 4.868172 ATGTTCATTCAATGGGAGGAGA 57.132 40.909 0.00 0.00 0.00 3.71
726 759 3.978718 GGCTTCTGGCTATGTTCATTC 57.021 47.619 0.00 0.00 41.46 2.67
761 794 0.968405 ACACCCATGCTCGCATTTTT 59.032 45.000 0.85 0.00 33.90 1.94
767 800 3.104766 CATGACACCCATGCTCGC 58.895 61.111 0.00 0.00 45.25 5.03
801 834 2.171840 GTGGAACTAGCTCACCAGAGA 58.828 52.381 0.00 0.00 44.98 3.10
812 845 2.039084 AGCTTCCTTGTGGTGGAACTAG 59.961 50.000 0.00 0.00 38.53 2.57
814 847 0.846693 AGCTTCCTTGTGGTGGAACT 59.153 50.000 0.00 0.00 38.53 3.01
839 872 2.223537 AAAAGTTTCGCCAAGGCAAG 57.776 45.000 12.19 0.00 42.06 4.01
864 897 4.400529 AAGGTCAAAAATTTGCTCGGTT 57.599 36.364 0.98 0.00 38.05 4.44
866 899 5.049828 AGAAAAGGTCAAAAATTTGCTCGG 58.950 37.500 0.98 0.00 38.05 4.63
867 900 7.692908 TTAGAAAAGGTCAAAAATTTGCTCG 57.307 32.000 0.98 0.00 38.05 5.03
931 964 2.168313 GGAAAAATACCCCATGGCACTG 59.832 50.000 6.09 0.00 33.59 3.66
1032 1333 1.202486 TGCCATTGCTACGTACCTAGC 60.202 52.381 14.74 14.74 39.81 3.42
1037 1340 0.921347 CGTCTGCCATTGCTACGTAC 59.079 55.000 8.43 0.00 40.40 3.67
1040 1343 1.148157 CCTCGTCTGCCATTGCTACG 61.148 60.000 9.82 9.82 43.94 3.51
1041 1344 0.108138 ACCTCGTCTGCCATTGCTAC 60.108 55.000 0.00 0.00 38.71 3.58
1045 1348 2.427453 ACTACTACCTCGTCTGCCATTG 59.573 50.000 0.00 0.00 0.00 2.82
1062 1365 3.887716 TCCGCCATTTCTACCTCTACTAC 59.112 47.826 0.00 0.00 0.00 2.73
1063 1366 4.142790 CTCCGCCATTTCTACCTCTACTA 58.857 47.826 0.00 0.00 0.00 1.82
1064 1367 2.959707 CTCCGCCATTTCTACCTCTACT 59.040 50.000 0.00 0.00 0.00 2.57
1123 1432 4.593864 GCTCGTCCTCCATCGCCC 62.594 72.222 0.00 0.00 0.00 6.13
1136 1445 2.501223 TAAGCTTCACCCACGGCTCG 62.501 60.000 0.00 0.00 33.63 5.03
1247 1562 4.392166 TGCGGGGAGTAGGCCTCA 62.392 66.667 9.68 0.00 42.40 3.86
1420 1735 3.322466 CCTTGAGGTCGTGGCCCT 61.322 66.667 0.00 0.00 34.11 5.19
1550 1865 3.316573 CTCCTCACCCTCGGCAACC 62.317 68.421 0.00 0.00 0.00 3.77
1552 1867 3.003173 CCTCCTCACCCTCGGCAA 61.003 66.667 0.00 0.00 0.00 4.52
1582 1909 1.004745 GCTCCATCCTCTTGGTCCAAA 59.995 52.381 5.64 0.00 38.01 3.28
1771 2107 1.905215 CCTTCATGAGTCCTGTCACCT 59.095 52.381 0.00 0.00 0.00 4.00
1781 2117 0.540923 GGCAGAGCTCCTTCATGAGT 59.459 55.000 10.93 0.00 34.74 3.41
1826 2165 2.485582 ACGTCGCATGAGGTCTCG 59.514 61.111 0.00 0.00 38.83 4.04
1896 2241 1.067776 GTTCTCAGTAGTGTCGGTGGG 60.068 57.143 0.00 0.00 0.00 4.61
1897 2242 1.401148 CGTTCTCAGTAGTGTCGGTGG 60.401 57.143 0.00 0.00 0.00 4.61
1898 2243 1.965083 CGTTCTCAGTAGTGTCGGTG 58.035 55.000 0.00 0.00 0.00 4.94
1899 2244 0.240411 GCGTTCTCAGTAGTGTCGGT 59.760 55.000 0.00 0.00 0.00 4.69
1902 2247 2.052157 GTGTGCGTTCTCAGTAGTGTC 58.948 52.381 0.00 0.00 0.00 3.67
1904 2249 1.787155 GTGTGTGCGTTCTCAGTAGTG 59.213 52.381 0.00 0.00 0.00 2.74
1905 2250 1.269621 GGTGTGTGCGTTCTCAGTAGT 60.270 52.381 0.00 0.00 0.00 2.73
1907 2252 0.747852 TGGTGTGTGCGTTCTCAGTA 59.252 50.000 0.00 0.00 0.00 2.74
2120 2519 1.895020 TACCGGCGAGCTTGTTCCAT 61.895 55.000 9.30 0.00 0.00 3.41
2324 2805 1.227853 GAGCACCACCTCCGTGTTT 60.228 57.895 0.00 0.00 38.41 2.83
2360 2841 4.492160 GACGCGGCGGATGACTCA 62.492 66.667 27.37 0.00 0.00 3.41
2540 3026 3.626924 GTCGGCACCCTGGAGTGT 61.627 66.667 14.18 0.00 40.04 3.55
2609 3095 0.103390 TGAACCGCTTCGTCTTGACA 59.897 50.000 1.59 0.00 0.00 3.58
2640 3126 3.136809 AGCATCTTCCATGAGCTGAGAAT 59.863 43.478 0.00 0.00 33.67 2.40
2809 3295 4.779819 ACGTACTTCGCGTGATCC 57.220 55.556 5.77 0.00 44.19 3.36
2854 3340 0.174845 TCCGGAAACCGTAGATGCAG 59.825 55.000 0.00 0.00 46.80 4.41
2864 3350 1.602377 CCTATCGCAAATCCGGAAACC 59.398 52.381 9.01 0.00 0.00 3.27
2869 3355 1.429463 GCTACCTATCGCAAATCCGG 58.571 55.000 0.00 0.00 0.00 5.14
2870 3356 1.060713 CGCTACCTATCGCAAATCCG 58.939 55.000 0.00 0.00 0.00 4.18
2873 3359 2.288273 GGTCTCGCTACCTATCGCAAAT 60.288 50.000 0.00 0.00 36.53 2.32
2875 3361 0.666913 GGTCTCGCTACCTATCGCAA 59.333 55.000 0.00 0.00 36.53 4.85
2882 3368 2.754658 CCCGTGGTCTCGCTACCT 60.755 66.667 7.42 0.00 40.44 3.08
2919 3405 1.153667 CCTCCTCTCGCTGAAGTGC 60.154 63.158 0.00 0.00 0.00 4.40
2939 3425 2.124277 GAAGCATTAGGGTTCCCGTT 57.876 50.000 1.91 0.00 45.97 4.44
2976 3462 3.244112 ACGACCAGAGACCAAACCTTAAG 60.244 47.826 0.00 0.00 0.00 1.85
2980 3466 1.129058 AACGACCAGAGACCAAACCT 58.871 50.000 0.00 0.00 0.00 3.50
3083 3569 2.603473 CCTCCACACACCTCCCGA 60.603 66.667 0.00 0.00 0.00 5.14
3101 3587 1.741706 CCAGATCTGGCAACACATCAC 59.258 52.381 28.45 0.00 43.72 3.06
3102 3588 2.118313 CCAGATCTGGCAACACATCA 57.882 50.000 28.45 0.00 43.72 3.07
3113 3599 1.002888 AGACACCAGCAACCAGATCTG 59.997 52.381 16.24 16.24 0.00 2.90
3114 3600 1.356124 AGACACCAGCAACCAGATCT 58.644 50.000 0.00 0.00 0.00 2.75
3115 3601 2.234908 ACTAGACACCAGCAACCAGATC 59.765 50.000 0.00 0.00 0.00 2.75
3116 3602 2.260822 ACTAGACACCAGCAACCAGAT 58.739 47.619 0.00 0.00 0.00 2.90
3117 3603 1.717032 ACTAGACACCAGCAACCAGA 58.283 50.000 0.00 0.00 0.00 3.86
3118 3604 2.550830 AACTAGACACCAGCAACCAG 57.449 50.000 0.00 0.00 0.00 4.00
3119 3605 3.211045 GAAAACTAGACACCAGCAACCA 58.789 45.455 0.00 0.00 0.00 3.67
3120 3606 2.223377 CGAAAACTAGACACCAGCAACC 59.777 50.000 0.00 0.00 0.00 3.77
3121 3607 2.870411 ACGAAAACTAGACACCAGCAAC 59.130 45.455 0.00 0.00 0.00 4.17
3122 3608 2.869801 CACGAAAACTAGACACCAGCAA 59.130 45.455 0.00 0.00 0.00 3.91
3123 3609 2.159014 ACACGAAAACTAGACACCAGCA 60.159 45.455 0.00 0.00 0.00 4.41
3124 3610 2.221055 CACACGAAAACTAGACACCAGC 59.779 50.000 0.00 0.00 0.00 4.85
3125 3611 2.221055 GCACACGAAAACTAGACACCAG 59.779 50.000 0.00 0.00 0.00 4.00
3126 3612 2.206750 GCACACGAAAACTAGACACCA 58.793 47.619 0.00 0.00 0.00 4.17
3127 3613 2.206750 TGCACACGAAAACTAGACACC 58.793 47.619 0.00 0.00 0.00 4.16
3128 3614 3.247648 ACATGCACACGAAAACTAGACAC 59.752 43.478 0.00 0.00 0.00 3.67
3129 3615 3.462982 ACATGCACACGAAAACTAGACA 58.537 40.909 0.00 0.00 0.00 3.41
3130 3616 3.741344 AGACATGCACACGAAAACTAGAC 59.259 43.478 0.00 0.00 0.00 2.59
3131 3617 3.990092 AGACATGCACACGAAAACTAGA 58.010 40.909 0.00 0.00 0.00 2.43
3132 3618 5.807520 AGATAGACATGCACACGAAAACTAG 59.192 40.000 0.00 0.00 0.00 2.57
3133 3619 5.720202 AGATAGACATGCACACGAAAACTA 58.280 37.500 0.00 0.00 0.00 2.24
3134 3620 4.569943 AGATAGACATGCACACGAAAACT 58.430 39.130 0.00 0.00 0.00 2.66
3135 3621 4.388773 TGAGATAGACATGCACACGAAAAC 59.611 41.667 0.00 0.00 0.00 2.43
3136 3622 4.388773 GTGAGATAGACATGCACACGAAAA 59.611 41.667 0.00 0.00 0.00 2.29
3137 3623 3.926527 GTGAGATAGACATGCACACGAAA 59.073 43.478 0.00 0.00 0.00 3.46
3138 3624 3.193479 AGTGAGATAGACATGCACACGAA 59.807 43.478 0.00 0.00 32.16 3.85
3139 3625 2.755103 AGTGAGATAGACATGCACACGA 59.245 45.455 0.00 0.00 32.16 4.35
3140 3626 3.156511 AGTGAGATAGACATGCACACG 57.843 47.619 0.00 0.00 32.16 4.49
3141 3627 4.047822 GCTAGTGAGATAGACATGCACAC 58.952 47.826 0.00 0.00 32.16 3.82
3142 3628 3.243201 CGCTAGTGAGATAGACATGCACA 60.243 47.826 0.00 0.00 32.16 4.57
3143 3629 3.243234 ACGCTAGTGAGATAGACATGCAC 60.243 47.826 10.99 0.00 0.00 4.57
3144 3630 2.952310 ACGCTAGTGAGATAGACATGCA 59.048 45.455 10.99 0.00 0.00 3.96
3145 3631 3.634568 ACGCTAGTGAGATAGACATGC 57.365 47.619 10.99 0.00 0.00 4.06
3146 3632 4.926244 ACAACGCTAGTGAGATAGACATG 58.074 43.478 10.99 0.00 0.00 3.21
3147 3633 4.036971 GGACAACGCTAGTGAGATAGACAT 59.963 45.833 10.99 0.00 0.00 3.06
3148 3634 3.377485 GGACAACGCTAGTGAGATAGACA 59.623 47.826 10.99 0.00 0.00 3.41
3149 3635 3.243134 GGGACAACGCTAGTGAGATAGAC 60.243 52.174 10.99 0.00 0.00 2.59
3150 3636 2.950309 GGGACAACGCTAGTGAGATAGA 59.050 50.000 10.99 0.00 0.00 1.98
3151 3637 2.952978 AGGGACAACGCTAGTGAGATAG 59.047 50.000 10.99 0.00 37.53 2.08
3152 3638 3.014304 AGGGACAACGCTAGTGAGATA 57.986 47.619 10.99 0.00 37.53 1.98
3153 3639 1.853963 AGGGACAACGCTAGTGAGAT 58.146 50.000 10.99 0.00 37.53 2.75
3154 3640 1.272490 CAAGGGACAACGCTAGTGAGA 59.728 52.381 10.99 0.00 38.34 3.27
3155 3641 1.673033 CCAAGGGACAACGCTAGTGAG 60.673 57.143 10.99 4.66 38.34 3.51
3156 3642 0.320374 CCAAGGGACAACGCTAGTGA 59.680 55.000 10.99 0.00 38.34 3.41
3157 3643 0.320374 TCCAAGGGACAACGCTAGTG 59.680 55.000 0.59 0.59 38.34 2.74
3158 3644 0.608640 CTCCAAGGGACAACGCTAGT 59.391 55.000 0.00 0.00 38.34 2.57
3159 3645 0.895530 TCTCCAAGGGACAACGCTAG 59.104 55.000 0.00 0.00 38.34 3.42
3160 3646 0.895530 CTCTCCAAGGGACAACGCTA 59.104 55.000 0.00 0.00 38.34 4.26
3161 3647 1.674057 CTCTCCAAGGGACAACGCT 59.326 57.895 0.00 0.00 41.02 5.07
3162 3648 1.376037 CCTCTCCAAGGGACAACGC 60.376 63.158 0.00 0.00 42.03 4.84
3163 3649 0.905357 ATCCTCTCCAAGGGACAACG 59.095 55.000 0.00 0.00 46.23 4.10
3164 3650 1.065126 CCATCCTCTCCAAGGGACAAC 60.065 57.143 0.00 0.00 46.23 3.32
3165 3651 1.289160 CCATCCTCTCCAAGGGACAA 58.711 55.000 0.00 0.00 46.23 3.18
3166 3652 1.274703 GCCATCCTCTCCAAGGGACA 61.275 60.000 0.00 0.00 46.23 4.02
3167 3653 1.529309 GCCATCCTCTCCAAGGGAC 59.471 63.158 0.00 0.00 46.23 4.46
3168 3654 2.066393 CGCCATCCTCTCCAAGGGA 61.066 63.158 0.00 0.00 46.23 4.20
3169 3655 2.370445 ACGCCATCCTCTCCAAGGG 61.370 63.158 0.00 0.00 46.23 3.95
3171 3657 0.467384 ATCACGCCATCCTCTCCAAG 59.533 55.000 0.00 0.00 0.00 3.61
3172 3658 0.911769 AATCACGCCATCCTCTCCAA 59.088 50.000 0.00 0.00 0.00 3.53
3173 3659 0.178767 CAATCACGCCATCCTCTCCA 59.821 55.000 0.00 0.00 0.00 3.86
3174 3660 0.179000 ACAATCACGCCATCCTCTCC 59.821 55.000 0.00 0.00 0.00 3.71
3175 3661 1.293924 CACAATCACGCCATCCTCTC 58.706 55.000 0.00 0.00 0.00 3.20
3176 3662 0.745845 GCACAATCACGCCATCCTCT 60.746 55.000 0.00 0.00 0.00 3.69
3177 3663 1.026182 TGCACAATCACGCCATCCTC 61.026 55.000 0.00 0.00 0.00 3.71
3178 3664 0.394762 ATGCACAATCACGCCATCCT 60.395 50.000 0.00 0.00 0.00 3.24
3179 3665 0.029834 GATGCACAATCACGCCATCC 59.970 55.000 0.00 0.00 35.16 3.51
3180 3666 1.019673 AGATGCACAATCACGCCATC 58.980 50.000 0.00 0.00 37.81 3.51
3181 3667 1.133598 CAAGATGCACAATCACGCCAT 59.866 47.619 0.00 0.00 37.81 4.40
3182 3668 0.522626 CAAGATGCACAATCACGCCA 59.477 50.000 0.00 0.00 37.81 5.69
3183 3669 0.799534 GCAAGATGCACAATCACGCC 60.800 55.000 0.00 0.00 44.26 5.68
3184 3670 2.645411 GCAAGATGCACAATCACGC 58.355 52.632 0.00 0.00 44.26 5.34
3205 3691 0.108138 AATCGAAACTGGAGCCGGAG 60.108 55.000 5.05 0.00 0.00 4.63
3206 3692 0.391130 CAATCGAAACTGGAGCCGGA 60.391 55.000 5.05 0.00 0.00 5.14
3207 3693 0.391130 TCAATCGAAACTGGAGCCGG 60.391 55.000 0.00 0.00 0.00 6.13
3208 3694 1.394917 CTTCAATCGAAACTGGAGCCG 59.605 52.381 0.00 0.00 0.00 5.52
3209 3695 2.699954 TCTTCAATCGAAACTGGAGCC 58.300 47.619 0.00 0.00 0.00 4.70
3210 3696 3.126000 CCTTCTTCAATCGAAACTGGAGC 59.874 47.826 0.00 0.00 0.00 4.70
3211 3697 4.319177 ACCTTCTTCAATCGAAACTGGAG 58.681 43.478 0.00 0.00 0.00 3.86
3212 3698 4.351874 ACCTTCTTCAATCGAAACTGGA 57.648 40.909 0.00 0.00 0.00 3.86
3213 3699 4.320494 CCAACCTTCTTCAATCGAAACTGG 60.320 45.833 0.00 0.00 0.00 4.00
3214 3700 4.787598 CCAACCTTCTTCAATCGAAACTG 58.212 43.478 0.00 0.00 0.00 3.16
3215 3701 3.253432 GCCAACCTTCTTCAATCGAAACT 59.747 43.478 0.00 0.00 0.00 2.66
3216 3702 3.253432 AGCCAACCTTCTTCAATCGAAAC 59.747 43.478 0.00 0.00 0.00 2.78
3217 3703 3.486383 AGCCAACCTTCTTCAATCGAAA 58.514 40.909 0.00 0.00 0.00 3.46
3218 3704 3.140325 AGCCAACCTTCTTCAATCGAA 57.860 42.857 0.00 0.00 0.00 3.71
3219 3705 2.859165 AGCCAACCTTCTTCAATCGA 57.141 45.000 0.00 0.00 0.00 3.59
3220 3706 2.352960 GCTAGCCAACCTTCTTCAATCG 59.647 50.000 2.29 0.00 0.00 3.34
3221 3707 2.685388 GGCTAGCCAACCTTCTTCAATC 59.315 50.000 29.33 0.00 35.81 2.67
3222 3708 2.310052 AGGCTAGCCAACCTTCTTCAAT 59.690 45.455 34.70 7.02 38.92 2.57
3223 3709 1.705186 AGGCTAGCCAACCTTCTTCAA 59.295 47.619 34.70 0.00 38.92 2.69
3224 3710 1.362224 AGGCTAGCCAACCTTCTTCA 58.638 50.000 34.70 0.00 38.92 3.02
3225 3711 2.087646 CAAGGCTAGCCAACCTTCTTC 58.912 52.381 34.70 4.29 44.55 2.87
3226 3712 1.272147 CCAAGGCTAGCCAACCTTCTT 60.272 52.381 34.70 16.01 44.55 2.52
3227 3713 0.329596 CCAAGGCTAGCCAACCTTCT 59.670 55.000 34.70 10.26 44.55 2.85
3228 3714 1.315981 GCCAAGGCTAGCCAACCTTC 61.316 60.000 34.70 14.69 44.55 3.46
3230 3716 2.356667 GCCAAGGCTAGCCAACCT 59.643 61.111 34.70 12.31 38.92 3.50
3240 3726 0.813210 CTCCTCGATGAAGCCAAGGC 60.813 60.000 2.02 2.02 42.33 4.35
3241 3727 0.539051 ACTCCTCGATGAAGCCAAGG 59.461 55.000 0.00 0.00 0.00 3.61
3242 3728 1.066573 ACACTCCTCGATGAAGCCAAG 60.067 52.381 0.00 0.00 0.00 3.61
3243 3729 0.976641 ACACTCCTCGATGAAGCCAA 59.023 50.000 0.00 0.00 0.00 4.52
3244 3730 1.847328 TACACTCCTCGATGAAGCCA 58.153 50.000 0.00 0.00 0.00 4.75
3245 3731 2.362397 TCATACACTCCTCGATGAAGCC 59.638 50.000 0.00 0.00 0.00 4.35
3246 3732 3.551863 CCTCATACACTCCTCGATGAAGC 60.552 52.174 0.00 0.00 0.00 3.86
3247 3733 3.634448 ACCTCATACACTCCTCGATGAAG 59.366 47.826 0.00 0.00 0.00 3.02
3248 3734 3.632333 ACCTCATACACTCCTCGATGAA 58.368 45.455 0.00 0.00 0.00 2.57
3249 3735 3.298686 ACCTCATACACTCCTCGATGA 57.701 47.619 0.00 0.00 0.00 2.92
3250 3736 4.392921 AAACCTCATACACTCCTCGATG 57.607 45.455 0.00 0.00 0.00 3.84
3251 3737 7.122948 GGATATAAACCTCATACACTCCTCGAT 59.877 40.741 0.00 0.00 0.00 3.59
3252 3738 6.433404 GGATATAAACCTCATACACTCCTCGA 59.567 42.308 0.00 0.00 0.00 4.04
3253 3739 6.350277 GGGATATAAACCTCATACACTCCTCG 60.350 46.154 0.00 0.00 0.00 4.63
3254 3740 6.070710 GGGGATATAAACCTCATACACTCCTC 60.071 46.154 0.00 0.00 0.00 3.71
3255 3741 5.785940 GGGGATATAAACCTCATACACTCCT 59.214 44.000 0.00 0.00 0.00 3.69
3256 3742 5.045797 GGGGGATATAAACCTCATACACTCC 60.046 48.000 0.00 0.00 0.00 3.85
3257 3743 6.051179 GGGGGATATAAACCTCATACACTC 57.949 45.833 0.00 0.00 0.00 3.51
3277 3763 4.201122 GGCAGATGGAGCTGGGGG 62.201 72.222 0.00 0.00 36.41 5.40
3278 3764 3.095163 AGGCAGATGGAGCTGGGG 61.095 66.667 0.00 0.00 36.41 4.96
3279 3765 2.192443 CAGGCAGATGGAGCTGGG 59.808 66.667 0.00 0.00 36.41 4.45
3280 3766 2.192443 CCAGGCAGATGGAGCTGG 59.808 66.667 0.00 0.00 43.57 4.85
3281 3767 3.317109 TCCAGGCAGATGGAGCTG 58.683 61.111 0.00 0.00 44.56 4.24
3286 3772 1.622811 GTCCTAGATCCAGGCAGATGG 59.377 57.143 1.71 0.00 42.11 3.51
3287 3773 1.271934 CGTCCTAGATCCAGGCAGATG 59.728 57.143 1.71 0.00 35.49 2.90
3288 3774 1.133325 ACGTCCTAGATCCAGGCAGAT 60.133 52.381 1.71 0.00 35.49 2.90
3289 3775 0.259065 ACGTCCTAGATCCAGGCAGA 59.741 55.000 1.71 0.00 35.49 4.26
3290 3776 1.067821 GAACGTCCTAGATCCAGGCAG 59.932 57.143 1.71 1.58 35.49 4.85
3291 3777 1.112113 GAACGTCCTAGATCCAGGCA 58.888 55.000 1.71 0.00 35.49 4.75
3292 3778 1.404843 AGAACGTCCTAGATCCAGGC 58.595 55.000 1.71 0.00 35.49 4.85
3293 3779 2.362717 GGAAGAACGTCCTAGATCCAGG 59.637 54.545 0.00 0.00 34.56 4.45
3294 3780 3.292460 AGGAAGAACGTCCTAGATCCAG 58.708 50.000 7.46 0.00 46.69 3.86
3295 3781 3.383698 AGGAAGAACGTCCTAGATCCA 57.616 47.619 7.46 0.00 46.69 3.41
3303 3789 3.119107 GGAACGAGGAAGAACGTCC 57.881 57.895 0.00 0.00 41.87 4.79
3317 3803 1.530323 ACATTAAGCACCACCGGAAC 58.470 50.000 9.46 0.00 0.00 3.62
3318 3804 1.883275 CAACATTAAGCACCACCGGAA 59.117 47.619 9.46 0.00 0.00 4.30
3319 3805 1.202830 ACAACATTAAGCACCACCGGA 60.203 47.619 9.46 0.00 0.00 5.14
3320 3806 1.243902 ACAACATTAAGCACCACCGG 58.756 50.000 0.00 0.00 0.00 5.28
3321 3807 2.660490 CAACAACATTAAGCACCACCG 58.340 47.619 0.00 0.00 0.00 4.94
3322 3808 2.223923 TGCAACAACATTAAGCACCACC 60.224 45.455 0.00 0.00 0.00 4.61
3323 3809 3.052036 CTGCAACAACATTAAGCACCAC 58.948 45.455 0.00 0.00 0.00 4.16
3324 3810 2.035704 CCTGCAACAACATTAAGCACCA 59.964 45.455 0.00 0.00 0.00 4.17
3325 3811 2.610232 CCCTGCAACAACATTAAGCACC 60.610 50.000 0.00 0.00 0.00 5.01
3326 3812 2.295909 TCCCTGCAACAACATTAAGCAC 59.704 45.455 0.00 0.00 0.00 4.40
3327 3813 2.557924 CTCCCTGCAACAACATTAAGCA 59.442 45.455 0.00 0.00 0.00 3.91
3328 3814 2.094545 CCTCCCTGCAACAACATTAAGC 60.095 50.000 0.00 0.00 0.00 3.09
3329 3815 3.057315 CACCTCCCTGCAACAACATTAAG 60.057 47.826 0.00 0.00 0.00 1.85
3330 3816 2.890311 CACCTCCCTGCAACAACATTAA 59.110 45.455 0.00 0.00 0.00 1.40
3331 3817 2.158534 ACACCTCCCTGCAACAACATTA 60.159 45.455 0.00 0.00 0.00 1.90
3332 3818 1.331214 CACCTCCCTGCAACAACATT 58.669 50.000 0.00 0.00 0.00 2.71
3333 3819 0.185901 ACACCTCCCTGCAACAACAT 59.814 50.000 0.00 0.00 0.00 2.71
3334 3820 0.751277 CACACCTCCCTGCAACAACA 60.751 55.000 0.00 0.00 0.00 3.33
3335 3821 0.751643 ACACACCTCCCTGCAACAAC 60.752 55.000 0.00 0.00 0.00 3.32
3336 3822 0.751277 CACACACCTCCCTGCAACAA 60.751 55.000 0.00 0.00 0.00 2.83
3337 3823 1.152984 CACACACCTCCCTGCAACA 60.153 57.895 0.00 0.00 0.00 3.33
3338 3824 1.898574 CCACACACCTCCCTGCAAC 60.899 63.158 0.00 0.00 0.00 4.17
3339 3825 2.055689 CTCCACACACCTCCCTGCAA 62.056 60.000 0.00 0.00 0.00 4.08
3340 3826 2.447572 TCCACACACCTCCCTGCA 60.448 61.111 0.00 0.00 0.00 4.41
3341 3827 2.348998 CTCCACACACCTCCCTGC 59.651 66.667 0.00 0.00 0.00 4.85
3342 3828 2.596851 CCCTCCACACACCTCCCTG 61.597 68.421 0.00 0.00 0.00 4.45
3343 3829 2.203998 CCCTCCACACACCTCCCT 60.204 66.667 0.00 0.00 0.00 4.20
3344 3830 2.529389 ACCCTCCACACACCTCCC 60.529 66.667 0.00 0.00 0.00 4.30
3345 3831 1.201429 ATCACCCTCCACACACCTCC 61.201 60.000 0.00 0.00 0.00 4.30
3346 3832 0.036010 CATCACCCTCCACACACCTC 60.036 60.000 0.00 0.00 0.00 3.85
3347 3833 0.768221 ACATCACCCTCCACACACCT 60.768 55.000 0.00 0.00 0.00 4.00
3348 3834 0.606401 CACATCACCCTCCACACACC 60.606 60.000 0.00 0.00 0.00 4.16
3349 3835 0.108585 ACACATCACCCTCCACACAC 59.891 55.000 0.00 0.00 0.00 3.82
3350 3836 0.843309 AACACATCACCCTCCACACA 59.157 50.000 0.00 0.00 0.00 3.72
3351 3837 1.523758 GAACACATCACCCTCCACAC 58.476 55.000 0.00 0.00 0.00 3.82
3352 3838 0.400213 GGAACACATCACCCTCCACA 59.600 55.000 0.00 0.00 0.00 4.17
3353 3839 0.322546 GGGAACACATCACCCTCCAC 60.323 60.000 0.00 0.00 40.39 4.02
3354 3840 0.770166 TGGGAACACATCACCCTCCA 60.770 55.000 0.00 0.00 43.59 3.86
3355 3841 0.404040 TTGGGAACACATCACCCTCC 59.596 55.000 0.00 0.00 43.59 4.30
3356 3842 2.286365 TTTGGGAACACATCACCCTC 57.714 50.000 0.00 0.00 43.59 4.30
3357 3843 2.807676 GATTTGGGAACACATCACCCT 58.192 47.619 0.00 0.00 44.99 4.34
3374 3860 0.981183 TAGACACCGGCAACCAGATT 59.019 50.000 0.00 0.00 0.00 2.40
3386 3872 3.064271 TGCACACGAAAAACTTAGACACC 59.936 43.478 0.00 0.00 0.00 4.16
3393 3879 4.241681 ACAAACATGCACACGAAAAACTT 58.758 34.783 0.00 0.00 0.00 2.66
3394 3880 3.843999 ACAAACATGCACACGAAAAACT 58.156 36.364 0.00 0.00 0.00 2.66
3398 3884 2.286125 CGAGACAAACATGCACACGAAA 60.286 45.455 0.00 0.00 0.00 3.46
3465 3951 5.694995 ACCTTCTTCAATTGAAAGTGGAGA 58.305 37.500 26.25 16.40 36.88 3.71
3470 3956 4.651045 AGCCAACCTTCTTCAATTGAAAGT 59.349 37.500 20.82 13.02 33.07 2.66
3471 3957 5.205759 AGCCAACCTTCTTCAATTGAAAG 57.794 39.130 20.82 15.74 33.07 2.62
3472 3958 5.278957 GCTAGCCAACCTTCTTCAATTGAAA 60.279 40.000 20.82 7.31 33.07 2.69
3474 3960 3.758554 GCTAGCCAACCTTCTTCAATTGA 59.241 43.478 3.38 3.38 0.00 2.57
3476 3962 3.092301 GGCTAGCCAACCTTCTTCAATT 58.908 45.455 29.33 0.00 35.81 2.32
3477 3963 2.310052 AGGCTAGCCAACCTTCTTCAAT 59.690 45.455 34.70 7.02 38.92 2.57
3478 3964 1.705186 AGGCTAGCCAACCTTCTTCAA 59.295 47.619 34.70 0.00 38.92 2.69
3479 3965 1.279271 GAGGCTAGCCAACCTTCTTCA 59.721 52.381 34.70 0.00 36.05 3.02
3480 3966 1.740718 CGAGGCTAGCCAACCTTCTTC 60.741 57.143 34.70 19.31 36.05 2.87
3481 3967 0.250513 CGAGGCTAGCCAACCTTCTT 59.749 55.000 34.70 12.30 36.05 2.52
3482 3968 1.617947 CCGAGGCTAGCCAACCTTCT 61.618 60.000 34.70 13.13 36.05 2.85
3483 3969 1.153349 CCGAGGCTAGCCAACCTTC 60.153 63.158 34.70 21.44 36.05 3.46
3484 3970 2.990479 CCGAGGCTAGCCAACCTT 59.010 61.111 34.70 14.76 36.05 3.50
3485 3971 3.787001 GCCGAGGCTAGCCAACCT 61.787 66.667 34.70 15.19 39.65 3.50
3498 3984 1.888436 ATGCTCCTCGACAAAGCCGA 61.888 55.000 6.50 0.00 35.12 5.54
3499 3985 1.021390 AATGCTCCTCGACAAAGCCG 61.021 55.000 6.50 0.00 35.12 5.52
3500 3986 1.135575 CAAATGCTCCTCGACAAAGCC 60.136 52.381 6.50 0.00 35.12 4.35
3501 3987 1.806542 TCAAATGCTCCTCGACAAAGC 59.193 47.619 2.72 2.72 36.56 3.51
3502 3988 2.417933 CCTCAAATGCTCCTCGACAAAG 59.582 50.000 0.00 0.00 0.00 2.77
3503 3989 2.224523 ACCTCAAATGCTCCTCGACAAA 60.225 45.455 0.00 0.00 0.00 2.83
3504 3990 1.347707 ACCTCAAATGCTCCTCGACAA 59.652 47.619 0.00 0.00 0.00 3.18
3505 3991 0.976641 ACCTCAAATGCTCCTCGACA 59.023 50.000 0.00 0.00 0.00 4.35
3506 3992 2.100605 AACCTCAAATGCTCCTCGAC 57.899 50.000 0.00 0.00 0.00 4.20
3507 3993 2.038426 TCAAACCTCAAATGCTCCTCGA 59.962 45.455 0.00 0.00 0.00 4.04
3508 3994 2.426522 TCAAACCTCAAATGCTCCTCG 58.573 47.619 0.00 0.00 0.00 4.63
3509 3995 3.379688 GGATCAAACCTCAAATGCTCCTC 59.620 47.826 0.00 0.00 0.00 3.71
3510 3996 3.359950 GGATCAAACCTCAAATGCTCCT 58.640 45.455 0.00 0.00 0.00 3.69
3511 3997 2.428530 GGGATCAAACCTCAAATGCTCC 59.571 50.000 0.00 0.00 0.00 4.70
3512 3998 2.428530 GGGGATCAAACCTCAAATGCTC 59.571 50.000 0.00 0.00 0.00 4.26
3513 3999 2.460669 GGGGATCAAACCTCAAATGCT 58.539 47.619 0.00 0.00 0.00 3.79
3514 4000 1.482182 GGGGGATCAAACCTCAAATGC 59.518 52.381 0.00 0.00 30.82 3.56
3531 4017 2.761213 GGCAAATGGAGCTGGGGG 60.761 66.667 0.00 0.00 0.00 5.40
3532 4018 2.056223 CAGGCAAATGGAGCTGGGG 61.056 63.158 0.00 0.00 0.00 4.96
3544 4030 1.480954 GAACGTCCTAGATCCAGGCAA 59.519 52.381 1.71 0.00 35.49 4.52
3575 4061 1.948611 GCGTAAATTGCCACTCCAGGA 60.949 52.381 0.00 0.00 0.00 3.86
3577 4063 1.131126 CAGCGTAAATTGCCACTCCAG 59.869 52.381 0.00 0.00 0.00 3.86
3618 4104 1.272092 CCCCTGATGCTGACCAGAAAA 60.272 52.381 0.47 0.00 32.37 2.29
3638 4124 4.097892 ACATTATTTCAATGGTCGGGAAGC 59.902 41.667 2.38 0.00 32.14 3.86
3670 4156 0.185901 CCCCGGGATCACCATGAAAT 59.814 55.000 26.32 0.00 40.22 2.17
3672 4158 1.618143 ACCCCGGGATCACCATGAA 60.618 57.895 26.32 0.00 40.22 2.57
3675 4161 1.618143 TTGACCCCGGGATCACCAT 60.618 57.895 20.46 0.00 40.22 3.55
3702 4188 3.510846 CCATGAGCAGAGCTTGGC 58.489 61.111 0.00 2.57 39.88 4.52
3727 4213 1.927174 CTTCTTCCTTGCATACGTCGG 59.073 52.381 0.00 0.00 0.00 4.79
3731 4217 2.691409 TCCCTTCTTCCTTGCATACG 57.309 50.000 0.00 0.00 0.00 3.06
3739 4225 4.601857 TGTAGGTTTTGATCCCTTCTTCCT 59.398 41.667 0.00 0.00 32.08 3.36
3750 4236 5.255397 TCCAAGTCCATGTAGGTTTTGAT 57.745 39.130 0.00 0.00 39.02 2.57
3752 4238 8.924511 ATATATCCAAGTCCATGTAGGTTTTG 57.075 34.615 0.00 0.00 39.02 2.44
3754 4240 9.936329 AAAATATATCCAAGTCCATGTAGGTTT 57.064 29.630 0.00 0.00 39.02 3.27
3757 4243 8.163408 TGGAAAATATATCCAAGTCCATGTAGG 58.837 37.037 7.53 0.00 43.84 3.18
3781 4267 6.752168 ACAAGAACATCCTTCAAGAAAATGG 58.248 36.000 0.00 0.00 0.00 3.16
3846 4335 3.495331 TGAGCAGGGAATAGTTTTTGCA 58.505 40.909 0.00 0.00 34.17 4.08
3847 4336 4.021981 AGTTGAGCAGGGAATAGTTTTTGC 60.022 41.667 0.00 0.00 0.00 3.68
3885 4374 9.743057 TGGTAATGTTTTATCACAAAACTGAAG 57.257 29.630 12.34 0.00 39.97 3.02
3887 4376 9.689976 CATGGTAATGTTTTATCACAAAACTGA 57.310 29.630 12.34 0.00 39.97 3.41
3889 4378 8.865090 TCCATGGTAATGTTTTATCACAAAACT 58.135 29.630 12.58 0.00 39.97 2.66
3890 4379 9.651913 ATCCATGGTAATGTTTTATCACAAAAC 57.348 29.630 12.58 5.81 39.78 2.43
3903 4520 4.167892 TGAAGGCCTAATCCATGGTAATGT 59.832 41.667 5.16 0.00 31.27 2.71
3904 4521 4.728772 TGAAGGCCTAATCCATGGTAATG 58.271 43.478 5.16 1.24 0.00 1.90
3905 4522 4.202609 CCTGAAGGCCTAATCCATGGTAAT 60.203 45.833 5.16 0.00 0.00 1.89
3935 4587 1.677217 GGTTGTCTCATCACTGGAGGC 60.677 57.143 0.00 0.00 37.51 4.70
3945 4597 2.291735 TGATGGGCATTGGTTGTCTCAT 60.292 45.455 0.00 0.00 0.00 2.90
3946 4598 1.075212 TGATGGGCATTGGTTGTCTCA 59.925 47.619 0.00 0.00 0.00 3.27
3970 4622 1.125093 AGTCGACCCATGTCCAACCA 61.125 55.000 13.01 0.00 38.32 3.67
3982 4634 0.461961 ATGCTTGGCTCTAGTCGACC 59.538 55.000 13.01 0.00 0.00 4.79
4003 4656 3.502211 CGTGCCCTCACTTAAAAGTTGAT 59.498 43.478 0.00 0.00 40.99 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.