Multiple sequence alignment - TraesCS7B01G377900

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G377900 chr7B 100.000 5278 0 0 1 5278 642286055 642280778 0.000000e+00 9747.0
1 TraesCS7B01G377900 chr7B 96.296 54 2 0 216 269 156757000 156756947 7.280000e-14 89.8
2 TraesCS7B01G377900 chr7B 95.349 43 2 0 3579 3621 57679107 57679065 9.480000e-08 69.4
3 TraesCS7B01G377900 chr7D 92.154 3760 214 44 555 4278 578497719 578494005 0.000000e+00 5234.0
4 TraesCS7B01G377900 chr7D 88.615 650 55 10 4641 5278 117875824 117876466 0.000000e+00 773.0
5 TraesCS7B01G377900 chr7D 83.954 349 23 5 4277 4605 578493837 578493502 2.390000e-78 303.0
6 TraesCS7B01G377900 chr7D 91.743 109 7 2 3682 3789 579051870 579051977 3.290000e-32 150.0
7 TraesCS7B01G377900 chr7D 95.556 45 2 0 3579 3623 101137678 101137634 7.330000e-09 73.1
8 TraesCS7B01G377900 chr7D 90.741 54 5 0 216 269 613336463 613336516 7.330000e-09 73.1
9 TraesCS7B01G377900 chr7D 97.059 34 1 0 501 534 5171940 5171973 2.050000e-04 58.4
10 TraesCS7B01G377900 chr7A 91.029 3578 276 25 716 4278 670825339 670821792 0.000000e+00 4787.0
11 TraesCS7B01G377900 chr7A 88.801 634 59 7 4643 5265 369578778 369578146 0.000000e+00 767.0
12 TraesCS7B01G377900 chr7A 87.417 151 18 1 553 702 670825563 670825413 7.030000e-39 172.0
13 TraesCS7B01G377900 chr7A 89.831 118 11 1 4331 4448 670578284 670578400 3.290000e-32 150.0
14 TraesCS7B01G377900 chr7A 89.831 118 11 1 4331 4448 670732249 670732365 3.290000e-32 150.0
15 TraesCS7B01G377900 chr7A 95.556 45 2 0 3579 3623 103398895 103398851 7.330000e-09 73.1
16 TraesCS7B01G377900 chr7A 100.000 34 0 0 501 534 724127882 724127849 4.410000e-06 63.9
17 TraesCS7B01G377900 chr7A 91.111 45 3 1 156 199 670827181 670827137 5.710000e-05 60.2
18 TraesCS7B01G377900 chr4D 89.408 642 54 10 4645 5278 461224134 461223499 0.000000e+00 797.0
19 TraesCS7B01G377900 chr4D 80.822 657 52 34 4639 5278 133733547 133734146 1.040000e-121 448.0
20 TraesCS7B01G377900 chr4D 96.154 52 2 0 218 269 5248915 5248864 9.420000e-13 86.1
21 TraesCS7B01G377900 chr4D 100.000 35 0 0 501 535 444288196 444288230 1.230000e-06 65.8
22 TraesCS7B01G377900 chr2B 89.335 647 52 8 4643 5278 61283416 61282776 0.000000e+00 797.0
23 TraesCS7B01G377900 chr2B 100.000 35 0 0 500 534 565063622 565063656 1.230000e-06 65.8
24 TraesCS7B01G377900 chr6D 88.665 644 55 15 4638 5265 470263484 470264125 0.000000e+00 769.0
25 TraesCS7B01G377900 chr6D 89.237 511 36 11 4640 5137 437962498 437961994 5.810000e-174 621.0
26 TraesCS7B01G377900 chr6D 94.231 52 3 0 218 269 69826302 69826251 4.380000e-11 80.5
27 TraesCS7B01G377900 chr2D 86.875 640 66 14 4640 5265 567054036 567054671 0.000000e+00 701.0
28 TraesCS7B01G377900 chr2D 86.544 379 36 11 4643 5011 10534840 10534467 2.290000e-108 403.0
29 TraesCS7B01G377900 chr2D 98.246 57 0 1 217 272 641569479 641569535 1.210000e-16 99.0
30 TraesCS7B01G377900 chr2D 96.296 54 2 0 216 269 129270005 129269952 7.280000e-14 89.8
31 TraesCS7B01G377900 chr2D 95.833 48 1 1 216 263 505775173 505775127 5.670000e-10 76.8
32 TraesCS7B01G377900 chr6A 85.736 652 57 17 4641 5278 495465993 495466622 0.000000e+00 656.0
33 TraesCS7B01G377900 chr5A 84.463 605 71 13 4643 5235 617121971 617121378 4.580000e-160 575.0
34 TraesCS7B01G377900 chr5A 83.144 528 61 15 4760 5277 631351267 631350758 1.730000e-124 457.0
35 TraesCS7B01G377900 chr5A 92.593 54 4 0 216 269 457002407 457002460 1.580000e-10 78.7
36 TraesCS7B01G377900 chr3B 81.651 654 82 18 4641 5278 33501775 33502406 4.720000e-140 508.0
37 TraesCS7B01G377900 chr3B 97.436 39 0 1 495 533 526280493 526280530 1.230000e-06 65.8
38 TraesCS7B01G377900 chr2A 81.279 641 74 26 4640 5263 728837855 728837244 1.330000e-130 477.0
39 TraesCS7B01G377900 chr2A 91.111 45 4 0 3579 3623 398418621 398418665 1.590000e-05 62.1
40 TraesCS7B01G377900 chr2A 91.111 45 4 0 3579 3623 398887465 398887421 1.590000e-05 62.1
41 TraesCS7B01G377900 chr5D 81.481 108 18 1 263 368 481956039 481956146 2.620000e-13 87.9
42 TraesCS7B01G377900 chr3D 94.545 55 3 0 213 267 404434102 404434156 9.420000e-13 86.1
43 TraesCS7B01G377900 chr3A 94.444 54 3 0 216 269 654195890 654195837 3.390000e-12 84.2
44 TraesCS7B01G377900 chr1A 92.593 54 4 0 216 269 367879226 367879279 1.580000e-10 78.7
45 TraesCS7B01G377900 chr5B 93.333 45 3 0 3579 3623 695755533 695755577 3.410000e-07 67.6
46 TraesCS7B01G377900 chr5B 100.000 34 0 0 501 534 378936645 378936678 4.410000e-06 63.9
47 TraesCS7B01G377900 chr1D 100.000 36 0 0 501 536 114661213 114661248 3.410000e-07 67.6
48 TraesCS7B01G377900 chr1D 97.222 36 1 0 498 533 36603308 36603343 1.590000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G377900 chr7B 642280778 642286055 5277 True 9747.000000 9747 100.000000 1 5278 1 chr7B.!!$R3 5277
1 TraesCS7B01G377900 chr7D 578493502 578497719 4217 True 2768.500000 5234 88.054000 555 4605 2 chr7D.!!$R2 4050
2 TraesCS7B01G377900 chr7D 117875824 117876466 642 False 773.000000 773 88.615000 4641 5278 1 chr7D.!!$F2 637
3 TraesCS7B01G377900 chr7A 670821792 670827181 5389 True 1673.066667 4787 89.852333 156 4278 3 chr7A.!!$R4 4122
4 TraesCS7B01G377900 chr7A 369578146 369578778 632 True 767.000000 767 88.801000 4643 5265 1 chr7A.!!$R2 622
5 TraesCS7B01G377900 chr4D 461223499 461224134 635 True 797.000000 797 89.408000 4645 5278 1 chr4D.!!$R2 633
6 TraesCS7B01G377900 chr4D 133733547 133734146 599 False 448.000000 448 80.822000 4639 5278 1 chr4D.!!$F1 639
7 TraesCS7B01G377900 chr2B 61282776 61283416 640 True 797.000000 797 89.335000 4643 5278 1 chr2B.!!$R1 635
8 TraesCS7B01G377900 chr6D 470263484 470264125 641 False 769.000000 769 88.665000 4638 5265 1 chr6D.!!$F1 627
9 TraesCS7B01G377900 chr6D 437961994 437962498 504 True 621.000000 621 89.237000 4640 5137 1 chr6D.!!$R2 497
10 TraesCS7B01G377900 chr2D 567054036 567054671 635 False 701.000000 701 86.875000 4640 5265 1 chr2D.!!$F1 625
11 TraesCS7B01G377900 chr6A 495465993 495466622 629 False 656.000000 656 85.736000 4641 5278 1 chr6A.!!$F1 637
12 TraesCS7B01G377900 chr5A 617121378 617121971 593 True 575.000000 575 84.463000 4643 5235 1 chr5A.!!$R1 592
13 TraesCS7B01G377900 chr5A 631350758 631351267 509 True 457.000000 457 83.144000 4760 5277 1 chr5A.!!$R2 517
14 TraesCS7B01G377900 chr3B 33501775 33502406 631 False 508.000000 508 81.651000 4641 5278 1 chr3B.!!$F1 637
15 TraesCS7B01G377900 chr2A 728837244 728837855 611 True 477.000000 477 81.279000 4640 5263 1 chr2A.!!$R2 623

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
52 53 0.033991 AGCTAGAGAAGGAGGCGTGA 60.034 55.000 0.0 0.0 0.00 4.35 F
342 452 0.035820 ATTTTTCCGGCGAGGCACTA 60.036 50.000 9.3 0.0 41.55 2.74 F
1635 2958 0.179070 GCCTCCCGAATCTCCAGTTC 60.179 60.000 0.0 0.0 0.00 3.01 F
2233 3556 1.004440 GCGAACCTCCAAGAGCTGT 60.004 57.895 0.0 0.0 0.00 4.40 F
3751 5080 0.392729 ACCAGGTACGTCTCTCTCCG 60.393 60.000 0.0 0.0 0.00 4.63 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1500 2823 0.456995 CGGAGAGCGAGTTCTTGGTC 60.457 60.0 10.27 10.27 0.00 4.02 R
1866 3189 0.586802 GACCGGTGAAGCTGTTGTTC 59.413 55.0 14.63 0.00 0.00 3.18 R
3051 4377 0.608308 TCCTCGACTTCCTCTTGCGA 60.608 55.0 0.00 0.00 0.00 5.10 R
3887 5216 0.031616 GGATCTCCAGGAGGGTCACT 60.032 60.0 17.10 0.00 38.11 3.41 R
5101 6660 0.097499 CACATGACGATGCGCAATGT 59.903 50.0 17.11 16.93 32.14 2.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
41 42 4.896829 CCCGGCCGGAGCTAGAGA 62.897 72.222 45.44 0.00 39.73 3.10
42 43 2.833582 CCGGCCGGAGCTAGAGAA 60.834 66.667 41.82 0.00 39.73 2.87
43 44 2.725008 CGGCCGGAGCTAGAGAAG 59.275 66.667 20.10 0.00 39.73 2.85
44 45 2.851071 CGGCCGGAGCTAGAGAAGG 61.851 68.421 20.10 0.00 39.73 3.46
45 46 1.455959 GGCCGGAGCTAGAGAAGGA 60.456 63.158 5.05 0.00 39.73 3.36
46 47 1.460273 GGCCGGAGCTAGAGAAGGAG 61.460 65.000 5.05 0.00 39.73 3.69
47 48 1.460273 GCCGGAGCTAGAGAAGGAGG 61.460 65.000 5.05 0.00 35.50 4.30
48 49 1.460273 CCGGAGCTAGAGAAGGAGGC 61.460 65.000 0.00 0.00 0.00 4.70
49 50 1.791103 CGGAGCTAGAGAAGGAGGCG 61.791 65.000 0.00 0.00 0.00 5.52
50 51 0.753848 GGAGCTAGAGAAGGAGGCGT 60.754 60.000 0.00 0.00 0.00 5.68
51 52 0.383949 GAGCTAGAGAAGGAGGCGTG 59.616 60.000 0.00 0.00 0.00 5.34
52 53 0.033991 AGCTAGAGAAGGAGGCGTGA 60.034 55.000 0.00 0.00 0.00 4.35
53 54 0.383949 GCTAGAGAAGGAGGCGTGAG 59.616 60.000 0.00 0.00 0.00 3.51
54 55 1.028905 CTAGAGAAGGAGGCGTGAGG 58.971 60.000 0.00 0.00 0.00 3.86
55 56 0.395862 TAGAGAAGGAGGCGTGAGGG 60.396 60.000 0.00 0.00 0.00 4.30
56 57 1.682684 GAGAAGGAGGCGTGAGGGA 60.683 63.158 0.00 0.00 0.00 4.20
57 58 1.671901 GAGAAGGAGGCGTGAGGGAG 61.672 65.000 0.00 0.00 0.00 4.30
58 59 1.682684 GAAGGAGGCGTGAGGGAGA 60.683 63.158 0.00 0.00 0.00 3.71
59 60 1.671901 GAAGGAGGCGTGAGGGAGAG 61.672 65.000 0.00 0.00 0.00 3.20
60 61 3.151022 GGAGGCGTGAGGGAGAGG 61.151 72.222 0.00 0.00 0.00 3.69
61 62 3.151022 GAGGCGTGAGGGAGAGGG 61.151 72.222 0.00 0.00 0.00 4.30
62 63 4.787280 AGGCGTGAGGGAGAGGGG 62.787 72.222 0.00 0.00 0.00 4.79
63 64 4.779733 GGCGTGAGGGAGAGGGGA 62.780 72.222 0.00 0.00 0.00 4.81
64 65 3.151022 GCGTGAGGGAGAGGGGAG 61.151 72.222 0.00 0.00 0.00 4.30
65 66 2.684104 CGTGAGGGAGAGGGGAGA 59.316 66.667 0.00 0.00 0.00 3.71
66 67 1.231641 CGTGAGGGAGAGGGGAGAT 59.768 63.158 0.00 0.00 0.00 2.75
67 68 0.478942 CGTGAGGGAGAGGGGAGATA 59.521 60.000 0.00 0.00 0.00 1.98
68 69 1.546773 CGTGAGGGAGAGGGGAGATAG 60.547 61.905 0.00 0.00 0.00 2.08
69 70 1.501604 GTGAGGGAGAGGGGAGATAGT 59.498 57.143 0.00 0.00 0.00 2.12
70 71 1.783979 TGAGGGAGAGGGGAGATAGTC 59.216 57.143 0.00 0.00 0.00 2.59
71 72 0.774908 AGGGAGAGGGGAGATAGTCG 59.225 60.000 0.00 0.00 0.00 4.18
72 73 0.251430 GGGAGAGGGGAGATAGTCGG 60.251 65.000 0.00 0.00 0.00 4.79
73 74 0.772384 GGAGAGGGGAGATAGTCGGA 59.228 60.000 0.00 0.00 0.00 4.55
74 75 1.271707 GGAGAGGGGAGATAGTCGGAG 60.272 61.905 0.00 0.00 0.00 4.63
75 76 0.111639 AGAGGGGAGATAGTCGGAGC 59.888 60.000 0.00 0.00 0.00 4.70
76 77 0.111639 GAGGGGAGATAGTCGGAGCT 59.888 60.000 0.00 0.00 0.00 4.09
77 78 0.558712 AGGGGAGATAGTCGGAGCTT 59.441 55.000 0.00 0.00 0.00 3.74
78 79 1.062810 AGGGGAGATAGTCGGAGCTTT 60.063 52.381 0.00 0.00 0.00 3.51
79 80 1.341852 GGGGAGATAGTCGGAGCTTTC 59.658 57.143 0.00 0.00 0.00 2.62
80 81 2.312390 GGGAGATAGTCGGAGCTTTCT 58.688 52.381 0.00 0.00 31.19 2.52
81 82 3.488363 GGGAGATAGTCGGAGCTTTCTA 58.512 50.000 0.00 0.00 29.22 2.10
82 83 3.253921 GGGAGATAGTCGGAGCTTTCTAC 59.746 52.174 0.00 0.00 29.22 2.59
83 84 3.884091 GGAGATAGTCGGAGCTTTCTACA 59.116 47.826 0.00 0.00 30.76 2.74
84 85 4.261280 GGAGATAGTCGGAGCTTTCTACAC 60.261 50.000 0.00 0.00 30.76 2.90
85 86 4.528920 AGATAGTCGGAGCTTTCTACACT 58.471 43.478 0.00 0.00 0.00 3.55
86 87 5.682659 AGATAGTCGGAGCTTTCTACACTA 58.317 41.667 0.00 0.00 0.00 2.74
87 88 6.300703 AGATAGTCGGAGCTTTCTACACTAT 58.699 40.000 0.00 0.00 33.80 2.12
88 89 6.773685 AGATAGTCGGAGCTTTCTACACTATT 59.226 38.462 0.00 0.00 32.54 1.73
89 90 5.251601 AGTCGGAGCTTTCTACACTATTC 57.748 43.478 0.00 0.00 0.00 1.75
90 91 4.705507 AGTCGGAGCTTTCTACACTATTCA 59.294 41.667 0.00 0.00 0.00 2.57
91 92 4.799428 GTCGGAGCTTTCTACACTATTCAC 59.201 45.833 0.00 0.00 0.00 3.18
92 93 4.461431 TCGGAGCTTTCTACACTATTCACA 59.539 41.667 0.00 0.00 0.00 3.58
93 94 5.047590 TCGGAGCTTTCTACACTATTCACAA 60.048 40.000 0.00 0.00 0.00 3.33
94 95 5.062308 CGGAGCTTTCTACACTATTCACAAC 59.938 44.000 0.00 0.00 0.00 3.32
95 96 6.166982 GGAGCTTTCTACACTATTCACAACT 58.833 40.000 0.00 0.00 0.00 3.16
96 97 6.091441 GGAGCTTTCTACACTATTCACAACTG 59.909 42.308 0.00 0.00 0.00 3.16
97 98 5.409826 AGCTTTCTACACTATTCACAACTGC 59.590 40.000 0.00 0.00 0.00 4.40
98 99 5.409826 GCTTTCTACACTATTCACAACTGCT 59.590 40.000 0.00 0.00 0.00 4.24
99 100 6.619446 GCTTTCTACACTATTCACAACTGCTG 60.619 42.308 0.00 0.00 0.00 4.41
100 101 4.245660 TCTACACTATTCACAACTGCTGC 58.754 43.478 0.00 0.00 0.00 5.25
101 102 2.849942 ACACTATTCACAACTGCTGCA 58.150 42.857 0.88 0.88 0.00 4.41
102 103 3.415212 ACACTATTCACAACTGCTGCAT 58.585 40.909 1.31 0.00 0.00 3.96
103 104 3.822735 ACACTATTCACAACTGCTGCATT 59.177 39.130 1.31 0.00 0.00 3.56
104 105 4.083110 ACACTATTCACAACTGCTGCATTC 60.083 41.667 1.31 0.00 0.00 2.67
105 106 4.155462 CACTATTCACAACTGCTGCATTCT 59.845 41.667 1.31 0.00 0.00 2.40
106 107 4.763793 ACTATTCACAACTGCTGCATTCTT 59.236 37.500 1.31 0.00 0.00 2.52
107 108 3.358707 TTCACAACTGCTGCATTCTTG 57.641 42.857 1.31 7.94 0.00 3.02
108 109 1.610038 TCACAACTGCTGCATTCTTGG 59.390 47.619 1.31 0.00 0.00 3.61
109 110 0.316204 ACAACTGCTGCATTCTTGGC 59.684 50.000 1.31 0.00 0.00 4.52
110 111 0.601558 CAACTGCTGCATTCTTGGCT 59.398 50.000 1.31 0.00 0.00 4.75
111 112 1.000506 CAACTGCTGCATTCTTGGCTT 59.999 47.619 1.31 0.00 0.00 4.35
112 113 2.205022 ACTGCTGCATTCTTGGCTTA 57.795 45.000 1.31 0.00 0.00 3.09
113 114 2.731572 ACTGCTGCATTCTTGGCTTAT 58.268 42.857 1.31 0.00 0.00 1.73
114 115 2.686915 ACTGCTGCATTCTTGGCTTATC 59.313 45.455 1.31 0.00 0.00 1.75
115 116 2.950309 CTGCTGCATTCTTGGCTTATCT 59.050 45.455 1.31 0.00 0.00 1.98
116 117 3.359033 TGCTGCATTCTTGGCTTATCTT 58.641 40.909 0.00 0.00 0.00 2.40
117 118 3.379372 TGCTGCATTCTTGGCTTATCTTC 59.621 43.478 0.00 0.00 0.00 2.87
118 119 3.243334 GCTGCATTCTTGGCTTATCTTCC 60.243 47.826 0.00 0.00 0.00 3.46
119 120 3.949754 CTGCATTCTTGGCTTATCTTCCA 59.050 43.478 0.00 0.00 0.00 3.53
120 121 4.539726 TGCATTCTTGGCTTATCTTCCAT 58.460 39.130 0.00 0.00 31.54 3.41
121 122 4.581824 TGCATTCTTGGCTTATCTTCCATC 59.418 41.667 0.00 0.00 31.54 3.51
122 123 4.581824 GCATTCTTGGCTTATCTTCCATCA 59.418 41.667 0.00 0.00 31.54 3.07
123 124 5.506982 GCATTCTTGGCTTATCTTCCATCAC 60.507 44.000 0.00 0.00 31.54 3.06
124 125 4.842531 TCTTGGCTTATCTTCCATCACA 57.157 40.909 0.00 0.00 31.54 3.58
125 126 5.378230 TCTTGGCTTATCTTCCATCACAT 57.622 39.130 0.00 0.00 31.54 3.21
126 127 5.371526 TCTTGGCTTATCTTCCATCACATC 58.628 41.667 0.00 0.00 31.54 3.06
127 128 3.732212 TGGCTTATCTTCCATCACATCG 58.268 45.455 0.00 0.00 0.00 3.84
128 129 3.070018 GGCTTATCTTCCATCACATCGG 58.930 50.000 0.00 0.00 0.00 4.18
129 130 2.481952 GCTTATCTTCCATCACATCGGC 59.518 50.000 0.00 0.00 0.00 5.54
130 131 3.732212 CTTATCTTCCATCACATCGGCA 58.268 45.455 0.00 0.00 0.00 5.69
131 132 2.251409 ATCTTCCATCACATCGGCAG 57.749 50.000 0.00 0.00 0.00 4.85
132 133 0.904649 TCTTCCATCACATCGGCAGT 59.095 50.000 0.00 0.00 0.00 4.40
133 134 1.278985 TCTTCCATCACATCGGCAGTT 59.721 47.619 0.00 0.00 0.00 3.16
134 135 2.086869 CTTCCATCACATCGGCAGTTT 58.913 47.619 0.00 0.00 0.00 2.66
135 136 1.737838 TCCATCACATCGGCAGTTTC 58.262 50.000 0.00 0.00 0.00 2.78
136 137 0.374758 CCATCACATCGGCAGTTTCG 59.625 55.000 0.00 0.00 0.00 3.46
137 138 0.374758 CATCACATCGGCAGTTTCGG 59.625 55.000 0.00 0.00 0.00 4.30
138 139 0.036388 ATCACATCGGCAGTTTCGGT 60.036 50.000 0.00 0.00 0.00 4.69
139 140 0.250124 TCACATCGGCAGTTTCGGTT 60.250 50.000 0.00 0.00 0.00 4.44
140 141 1.001068 TCACATCGGCAGTTTCGGTTA 59.999 47.619 0.00 0.00 0.00 2.85
141 142 1.801771 CACATCGGCAGTTTCGGTTAA 59.198 47.619 0.00 0.00 0.00 2.01
142 143 2.418628 CACATCGGCAGTTTCGGTTAAT 59.581 45.455 0.00 0.00 0.00 1.40
143 144 3.078837 ACATCGGCAGTTTCGGTTAATT 58.921 40.909 0.00 0.00 0.00 1.40
144 145 3.504520 ACATCGGCAGTTTCGGTTAATTT 59.495 39.130 0.00 0.00 0.00 1.82
145 146 4.022676 ACATCGGCAGTTTCGGTTAATTTT 60.023 37.500 0.00 0.00 0.00 1.82
146 147 4.149910 TCGGCAGTTTCGGTTAATTTTC 57.850 40.909 0.00 0.00 0.00 2.29
147 148 3.816523 TCGGCAGTTTCGGTTAATTTTCT 59.183 39.130 0.00 0.00 0.00 2.52
148 149 4.083696 TCGGCAGTTTCGGTTAATTTTCTC 60.084 41.667 0.00 0.00 0.00 2.87
149 150 4.482386 GGCAGTTTCGGTTAATTTTCTCC 58.518 43.478 0.00 0.00 0.00 3.71
150 151 4.482386 GCAGTTTCGGTTAATTTTCTCCC 58.518 43.478 0.00 0.00 0.00 4.30
151 152 4.719040 CAGTTTCGGTTAATTTTCTCCCG 58.281 43.478 0.00 0.00 39.98 5.14
152 153 3.754850 AGTTTCGGTTAATTTTCTCCCGG 59.245 43.478 0.00 0.00 39.13 5.73
153 154 1.741528 TCGGTTAATTTTCTCCCGGC 58.258 50.000 0.00 0.00 39.13 6.13
154 155 0.736636 CGGTTAATTTTCTCCCGGCC 59.263 55.000 0.00 0.00 35.11 6.13
185 186 4.525024 CTTCTTCCTTCTCCTCATGCATT 58.475 43.478 0.00 0.00 0.00 3.56
186 187 3.882444 TCTTCCTTCTCCTCATGCATTG 58.118 45.455 0.00 0.00 0.00 2.82
189 190 1.948145 CCTTCTCCTCATGCATTGCTC 59.052 52.381 10.49 0.00 0.00 4.26
194 195 1.734137 CTCATGCATTGCTCAGCCC 59.266 57.895 10.49 0.00 0.00 5.19
200 201 4.052518 ATTGCTCAGCCCCCGCTT 62.053 61.111 0.00 0.00 45.55 4.68
201 202 4.722700 TTGCTCAGCCCCCGCTTC 62.723 66.667 0.00 0.00 45.55 3.86
220 330 3.751246 CCGTCGGTACTTGCGGGA 61.751 66.667 2.08 0.00 40.45 5.14
236 346 2.888534 GAGCGGGCGCACGAAATA 60.889 61.111 39.76 0.00 44.88 1.40
237 347 2.435234 AGCGGGCGCACGAAATAA 60.435 55.556 39.76 0.00 44.88 1.40
238 348 2.022762 GCGGGCGCACGAAATAAG 59.977 61.111 39.76 4.83 41.49 1.73
239 349 2.022762 CGGGCGCACGAAATAAGC 59.977 61.111 31.90 0.00 35.47 3.09
244 354 2.647791 GCACGAAATAAGCGGCGC 60.648 61.111 26.86 26.86 0.00 6.53
245 355 2.349648 CACGAAATAAGCGGCGCG 60.350 61.111 27.59 12.84 0.00 6.86
246 356 2.812178 ACGAAATAAGCGGCGCGT 60.812 55.556 27.59 26.43 0.00 6.01
247 357 2.349648 CGAAATAAGCGGCGCGTG 60.350 61.111 29.63 9.16 0.00 5.34
248 358 2.794355 CGAAATAAGCGGCGCGTGA 61.794 57.895 29.63 17.65 0.00 4.35
249 359 1.641677 GAAATAAGCGGCGCGTGAT 59.358 52.632 29.63 19.12 0.00 3.06
250 360 0.654472 GAAATAAGCGGCGCGTGATG 60.654 55.000 29.63 0.00 0.00 3.07
257 367 4.811761 GGCGCGTGATGCCGTTTC 62.812 66.667 8.43 0.00 43.70 2.78
260 370 3.788766 GCGTGATGCCGTTTCGCT 61.789 61.111 0.00 0.00 42.88 4.93
261 371 2.395690 CGTGATGCCGTTTCGCTC 59.604 61.111 0.00 0.00 0.00 5.03
263 373 2.813474 TGATGCCGTTTCGCTCCG 60.813 61.111 0.00 0.00 0.00 4.63
264 374 4.223964 GATGCCGTTTCGCTCCGC 62.224 66.667 0.00 0.00 0.00 5.54
310 420 3.315972 GTTTGAAACGGTTGTGCGT 57.684 47.368 0.00 0.00 0.00 5.24
312 422 0.798771 TTTGAAACGGTTGTGCGTGC 60.799 50.000 0.00 0.00 0.00 5.34
313 423 1.923227 TTGAAACGGTTGTGCGTGCA 61.923 50.000 0.00 0.00 0.00 4.57
314 424 1.226435 GAAACGGTTGTGCGTGCAA 60.226 52.632 0.00 0.00 0.00 4.08
315 425 0.798771 GAAACGGTTGTGCGTGCAAA 60.799 50.000 0.00 0.00 0.00 3.68
316 426 0.388649 AAACGGTTGTGCGTGCAAAA 60.389 45.000 0.00 0.00 0.00 2.44
317 427 0.388649 AACGGTTGTGCGTGCAAAAA 60.389 45.000 0.00 0.00 0.00 1.94
337 447 4.632538 AAATCTAATTTTTCCGGCGAGG 57.367 40.909 9.30 0.00 42.97 4.63
340 450 0.806241 TAATTTTTCCGGCGAGGCAC 59.194 50.000 9.30 0.00 40.77 5.01
342 452 0.035820 ATTTTTCCGGCGAGGCACTA 60.036 50.000 9.30 0.00 41.55 2.74
344 454 0.035820 TTTTCCGGCGAGGCACTAAT 60.036 50.000 9.30 0.00 41.55 1.73
345 455 0.825410 TTTCCGGCGAGGCACTAATA 59.175 50.000 9.30 0.00 41.55 0.98
346 456 1.045407 TTCCGGCGAGGCACTAATAT 58.955 50.000 9.30 0.00 41.55 1.28
347 457 0.601558 TCCGGCGAGGCACTAATATC 59.398 55.000 9.30 0.00 41.55 1.63
348 458 0.732880 CCGGCGAGGCACTAATATCG 60.733 60.000 9.30 0.00 41.55 2.92
351 461 2.062779 CGAGGCACTAATATCGCGC 58.937 57.895 0.00 0.00 41.55 6.86
352 462 1.665544 CGAGGCACTAATATCGCGCG 61.666 60.000 26.76 26.76 41.55 6.86
354 464 2.307309 GGCACTAATATCGCGCGCA 61.307 57.895 32.61 18.69 0.00 6.09
356 466 0.517132 GCACTAATATCGCGCGCATG 60.517 55.000 32.61 16.35 0.00 4.06
357 467 0.784178 CACTAATATCGCGCGCATGT 59.216 50.000 32.61 18.14 0.00 3.21
359 469 1.192312 ACTAATATCGCGCGCATGTTG 59.808 47.619 32.61 14.68 0.00 3.33
361 471 1.157257 AATATCGCGCGCATGTTGGA 61.157 50.000 32.61 19.20 0.00 3.53
362 472 1.560004 ATATCGCGCGCATGTTGGAG 61.560 55.000 32.61 12.21 0.00 3.86
364 474 3.566853 CGCGCGCATGTTGGAGAT 61.567 61.111 32.61 0.00 0.00 2.75
365 475 2.023741 GCGCGCATGTTGGAGATG 59.976 61.111 29.10 0.00 0.00 2.90
366 476 2.023741 CGCGCATGTTGGAGATGC 59.976 61.111 8.75 0.00 42.41 3.91
368 478 1.063649 GCGCATGTTGGAGATGCTG 59.936 57.895 0.30 3.87 43.45 4.41
370 480 0.376152 CGCATGTTGGAGATGCTGTC 59.624 55.000 8.18 0.00 43.45 3.51
371 481 1.456296 GCATGTTGGAGATGCTGTCA 58.544 50.000 3.13 0.00 42.52 3.58
373 483 1.400846 CATGTTGGAGATGCTGTCAGC 59.599 52.381 18.32 18.32 42.82 4.26
375 485 1.901833 TGTTGGAGATGCTGTCAGCTA 59.098 47.619 24.76 12.21 42.97 3.32
387 538 2.577112 CAGCTAGACGTCACCGCG 60.577 66.667 19.50 0.00 37.70 6.46
411 562 2.187946 CACGGCATCCCTGTCTCC 59.812 66.667 0.00 0.00 0.00 3.71
415 566 2.003548 GGCATCCCTGTCTCCCCTT 61.004 63.158 0.00 0.00 0.00 3.95
416 567 1.225704 GCATCCCTGTCTCCCCTTG 59.774 63.158 0.00 0.00 0.00 3.61
418 569 0.916358 CATCCCTGTCTCCCCTTGGT 60.916 60.000 0.00 0.00 0.00 3.67
420 571 2.352805 CCTGTCTCCCCTTGGTGC 59.647 66.667 0.00 0.00 0.00 5.01
422 573 3.256960 TGTCTCCCCTTGGTGCCC 61.257 66.667 0.00 0.00 0.00 5.36
423 574 2.936032 GTCTCCCCTTGGTGCCCT 60.936 66.667 0.00 0.00 0.00 5.19
424 575 2.121506 TCTCCCCTTGGTGCCCTT 60.122 61.111 0.00 0.00 0.00 3.95
425 576 2.036256 CTCCCCTTGGTGCCCTTG 59.964 66.667 0.00 0.00 0.00 3.61
426 577 4.299796 TCCCCTTGGTGCCCTTGC 62.300 66.667 0.00 0.00 38.26 4.01
428 579 4.619320 CCCTTGGTGCCCTTGCCA 62.619 66.667 0.00 0.00 36.33 4.92
429 580 3.305516 CCTTGGTGCCCTTGCCAC 61.306 66.667 0.00 0.00 36.33 5.01
430 581 3.673484 CTTGGTGCCCTTGCCACG 61.673 66.667 0.00 0.00 36.33 4.94
457 608 2.073816 GAGAATCGACCGAGGCAAAAA 58.926 47.619 0.00 0.00 0.00 1.94
485 636 3.716353 TCCTAATTGCAGGAGGAATAGCA 59.284 43.478 10.09 0.00 39.89 3.49
491 642 2.026641 GCAGGAGGAATAGCAAATGCA 58.973 47.619 8.28 0.00 45.16 3.96
492 643 2.428171 GCAGGAGGAATAGCAAATGCAA 59.572 45.455 8.28 0.00 45.16 4.08
493 644 3.119029 GCAGGAGGAATAGCAAATGCAAA 60.119 43.478 8.28 0.00 45.16 3.68
494 645 4.442472 GCAGGAGGAATAGCAAATGCAAAT 60.442 41.667 8.28 0.00 45.16 2.32
496 647 6.683610 GCAGGAGGAATAGCAAATGCAAATTA 60.684 38.462 8.28 0.00 45.16 1.40
497 648 7.439381 CAGGAGGAATAGCAAATGCAAATTAT 58.561 34.615 8.28 0.50 45.16 1.28
498 649 8.579006 CAGGAGGAATAGCAAATGCAAATTATA 58.421 33.333 8.28 0.00 45.16 0.98
499 650 9.317827 AGGAGGAATAGCAAATGCAAATTATAT 57.682 29.630 8.28 0.00 45.16 0.86
500 651 9.933723 GGAGGAATAGCAAATGCAAATTATATT 57.066 29.630 8.28 2.04 45.16 1.28
507 658 8.482852 AGCAAATGCAAATTATATTACTCCCT 57.517 30.769 8.28 0.00 45.16 4.20
509 660 9.196552 GCAAATGCAAATTATATTACTCCCTTC 57.803 33.333 0.00 0.00 41.59 3.46
513 664 8.635765 TGCAAATTATATTACTCCCTTCATCC 57.364 34.615 0.00 0.00 0.00 3.51
515 666 7.669722 GCAAATTATATTACTCCCTTCATCCCA 59.330 37.037 0.00 0.00 0.00 4.37
516 667 9.759473 CAAATTATATTACTCCCTTCATCCCAT 57.241 33.333 0.00 0.00 0.00 4.00
521 672 6.786843 ATTACTCCCTTCATCCCATAATGT 57.213 37.500 0.00 0.00 0.00 2.71
522 673 7.888514 ATTACTCCCTTCATCCCATAATGTA 57.111 36.000 0.00 0.00 0.00 2.29
526 1382 6.183361 ACTCCCTTCATCCCATAATGTAAGAC 60.183 42.308 0.00 0.00 0.00 3.01
530 1386 6.542370 CCTTCATCCCATAATGTAAGACGTTT 59.458 38.462 0.00 0.00 0.00 3.60
551 1779 2.852714 TTTATGGGACGGAGGGAGTA 57.147 50.000 0.00 0.00 0.00 2.59
562 1790 2.431057 CGGAGGGAGTAGTTAGCAACAT 59.569 50.000 0.00 0.00 0.00 2.71
593 1822 4.955450 AGTTGTATGGCAATTATTCCAGCA 59.045 37.500 0.00 2.78 39.55 4.41
613 1842 6.072064 CCAGCAGACATTCTCAAGAAAGAAAT 60.072 38.462 2.27 0.00 38.69 2.17
617 1846 9.683069 GCAGACATTCTCAAGAAAGAAATAAAA 57.317 29.630 2.27 0.00 38.69 1.52
634 1863 6.759497 AATAAAAACTAGGTTAGCAGCCAG 57.241 37.500 0.00 0.00 0.00 4.85
690 1919 1.267121 AGTGCCTAACGATGTCCTGT 58.733 50.000 0.00 0.00 0.00 4.00
700 1964 1.133216 CGATGTCCTGTCACGATCACT 59.867 52.381 0.00 0.00 0.00 3.41
711 1975 3.786576 GTCACGATCACTATGTCGAACTG 59.213 47.826 1.49 0.00 40.11 3.16
712 1976 2.531912 CACGATCACTATGTCGAACTGC 59.468 50.000 1.49 0.00 40.11 4.40
714 1978 2.786027 CGATCACTATGTCGAACTGCTG 59.214 50.000 0.00 0.00 40.11 4.41
805 2094 0.535335 ATCGTACCACCATCAGCGTT 59.465 50.000 0.00 0.00 0.00 4.84
806 2095 1.175654 TCGTACCACCATCAGCGTTA 58.824 50.000 0.00 0.00 0.00 3.18
807 2096 1.135315 TCGTACCACCATCAGCGTTAC 60.135 52.381 0.00 0.00 0.00 2.50
808 2097 1.648504 GTACCACCATCAGCGTTACC 58.351 55.000 0.00 0.00 0.00 2.85
809 2098 1.206371 GTACCACCATCAGCGTTACCT 59.794 52.381 0.00 0.00 0.00 3.08
812 2101 1.472728 CCACCATCAGCGTTACCTACC 60.473 57.143 0.00 0.00 0.00 3.18
813 2102 1.480954 CACCATCAGCGTTACCTACCT 59.519 52.381 0.00 0.00 0.00 3.08
814 2103 1.480954 ACCATCAGCGTTACCTACCTG 59.519 52.381 0.00 0.00 0.00 4.00
815 2104 1.754803 CCATCAGCGTTACCTACCTGA 59.245 52.381 0.00 0.00 37.98 3.86
856 2179 5.648092 ACTTGCACAACAGATTAGATTACCC 59.352 40.000 0.00 0.00 0.00 3.69
857 2180 5.435686 TGCACAACAGATTAGATTACCCT 57.564 39.130 0.00 0.00 0.00 4.34
858 2181 5.815581 TGCACAACAGATTAGATTACCCTT 58.184 37.500 0.00 0.00 0.00 3.95
859 2182 6.953101 TGCACAACAGATTAGATTACCCTTA 58.047 36.000 0.00 0.00 0.00 2.69
860 2183 6.821665 TGCACAACAGATTAGATTACCCTTAC 59.178 38.462 0.00 0.00 0.00 2.34
861 2184 6.260271 GCACAACAGATTAGATTACCCTTACC 59.740 42.308 0.00 0.00 0.00 2.85
877 2200 2.897271 TACCCTTTGACCATGCACAT 57.103 45.000 0.00 0.00 0.00 3.21
880 2203 2.224992 ACCCTTTGACCATGCACATACA 60.225 45.455 0.00 0.00 0.00 2.29
881 2204 3.025978 CCCTTTGACCATGCACATACAT 58.974 45.455 0.00 0.00 0.00 2.29
882 2205 4.206375 CCCTTTGACCATGCACATACATA 58.794 43.478 0.00 0.00 0.00 2.29
883 2206 4.036734 CCCTTTGACCATGCACATACATAC 59.963 45.833 0.00 0.00 0.00 2.39
884 2207 4.036734 CCTTTGACCATGCACATACATACC 59.963 45.833 0.00 0.00 0.00 2.73
885 2208 4.502105 TTGACCATGCACATACATACCT 57.498 40.909 0.00 0.00 0.00 3.08
886 2209 4.502105 TGACCATGCACATACATACCTT 57.498 40.909 0.00 0.00 0.00 3.50
887 2210 5.622346 TGACCATGCACATACATACCTTA 57.378 39.130 0.00 0.00 0.00 2.69
888 2211 5.610398 TGACCATGCACATACATACCTTAG 58.390 41.667 0.00 0.00 0.00 2.18
919 2242 2.125552 CCAGCCGCGACTTGATCA 60.126 61.111 8.23 0.00 0.00 2.92
926 2249 1.467556 CGCGACTTGATCACTCGAGC 61.468 60.000 20.99 11.27 36.48 5.03
927 2250 0.179150 GCGACTTGATCACTCGAGCT 60.179 55.000 20.99 0.00 36.48 4.09
968 2291 1.031571 GCCCATGCAAACCTGATCGA 61.032 55.000 0.00 0.00 37.47 3.59
969 2292 1.683943 CCCATGCAAACCTGATCGAT 58.316 50.000 0.00 0.00 0.00 3.59
970 2293 1.605710 CCCATGCAAACCTGATCGATC 59.394 52.381 18.72 18.72 0.00 3.69
971 2294 2.291365 CCATGCAAACCTGATCGATCA 58.709 47.619 25.80 25.80 35.16 2.92
985 2308 0.525455 CGATCAGCATTCGACGACCA 60.525 55.000 0.00 0.00 38.88 4.02
991 2314 1.804326 CATTCGACGACCACGGACC 60.804 63.158 0.00 0.00 44.46 4.46
992 2315 2.270257 ATTCGACGACCACGGACCA 61.270 57.895 0.00 0.00 44.46 4.02
1041 2364 2.436292 GTGGCTCTGCTCCTGCTG 60.436 66.667 0.00 0.00 40.48 4.41
1050 2373 1.670406 GCTCCTGCTGTCCTGTGTG 60.670 63.158 0.00 0.00 36.03 3.82
1306 2629 2.280592 ACAACGCCTTCACGGGAC 60.281 61.111 0.00 0.00 37.37 4.46
1346 2669 1.525535 GACTCGGGCGCCTCTACTA 60.526 63.158 28.56 0.00 0.00 1.82
1452 2775 4.636435 AACAACCTCACCGGCGGG 62.636 66.667 31.78 19.08 40.11 6.13
1485 2808 3.804193 GGCGCCTTTCCGAAGCTG 61.804 66.667 22.15 0.00 0.00 4.24
1486 2809 3.804193 GCGCCTTTCCGAAGCTGG 61.804 66.667 0.00 0.00 0.00 4.85
1488 2811 3.443925 GCCTTTCCGAAGCTGGCC 61.444 66.667 0.00 0.00 37.81 5.36
1489 2812 2.034066 CCTTTCCGAAGCTGGCCA 59.966 61.111 4.71 4.71 0.00 5.36
1495 2818 4.189188 CGAAGCTGGCCATGCTGC 62.189 66.667 24.47 22.11 41.03 5.25
1496 2819 4.189188 GAAGCTGGCCATGCTGCG 62.189 66.667 24.47 6.75 41.03 5.18
1505 2828 3.057548 CATGCTGCGGCTGACCAA 61.058 61.111 20.27 0.00 39.59 3.67
1554 2877 1.869690 GCTCGCAAACCTCAAGACC 59.130 57.895 0.00 0.00 0.00 3.85
1558 2881 0.443869 CGCAAACCTCAAGACCATCG 59.556 55.000 0.00 0.00 0.00 3.84
1561 2884 2.612972 GCAAACCTCAAGACCATCGAGA 60.613 50.000 0.00 0.00 0.00 4.04
1563 2886 3.320673 AACCTCAAGACCATCGAGAAC 57.679 47.619 0.00 0.00 0.00 3.01
1608 2931 3.003763 GGCGAAGTCCCTGAGGGT 61.004 66.667 18.83 0.00 44.74 4.34
1614 2937 3.827898 GTCCCTGAGGGTCTCGCG 61.828 72.222 18.83 0.00 44.74 5.87
1634 2957 1.908483 GCCTCCCGAATCTCCAGTT 59.092 57.895 0.00 0.00 0.00 3.16
1635 2958 0.179070 GCCTCCCGAATCTCCAGTTC 60.179 60.000 0.00 0.00 0.00 3.01
1640 2963 2.233922 TCCCGAATCTCCAGTTCTTCAC 59.766 50.000 0.00 0.00 0.00 3.18
1641 2964 2.263077 CCGAATCTCCAGTTCTTCACG 58.737 52.381 0.00 0.00 0.00 4.35
1860 3183 1.374190 CCAGCTGCAGTTCCTCAGT 59.626 57.895 16.64 0.00 33.09 3.41
1866 3189 1.528586 CTGCAGTTCCTCAGTTTGTCG 59.471 52.381 5.25 0.00 0.00 4.35
1884 3207 1.157870 CGAACAACAGCTTCACCGGT 61.158 55.000 0.00 0.00 0.00 5.28
1953 3276 2.594592 AACAACCAGCTCACGGCC 60.595 61.111 0.00 0.00 43.05 6.13
2014 3337 3.112709 GCGACGCCCTGTCTGAAC 61.113 66.667 9.14 0.00 45.87 3.18
2046 3369 2.008697 CAACAAGTTTTCCGGCGCG 61.009 57.895 0.00 0.00 0.00 6.86
2133 3456 2.025418 CGTTATACCGCCGGGCATC 61.025 63.158 20.71 0.00 36.48 3.91
2134 3457 1.070105 GTTATACCGCCGGGCATCA 59.930 57.895 20.71 2.59 36.48 3.07
2155 3478 2.348888 AACCTCGTCGGGCTACAGG 61.349 63.158 0.00 0.00 36.97 4.00
2156 3479 4.208686 CCTCGTCGGGCTACAGGC 62.209 72.222 0.00 0.00 40.90 4.85
2214 3537 2.110006 GAGGGGATCGGCAAGCTC 59.890 66.667 0.00 0.00 0.00 4.09
2233 3556 1.004440 GCGAACCTCCAAGAGCTGT 60.004 57.895 0.00 0.00 0.00 4.40
2235 3558 1.997669 CGAACCTCCAAGAGCTGTAC 58.002 55.000 0.00 0.00 0.00 2.90
2315 3638 2.945398 CTTAGCCTCGACCTCAGCGC 62.945 65.000 0.00 0.00 0.00 5.92
2322 3645 2.659610 GACCTCAGCGCCAACTCT 59.340 61.111 2.29 0.00 0.00 3.24
2358 3681 4.785453 CCCAGCCTCGGCAACCTC 62.785 72.222 11.02 0.00 44.88 3.85
2478 3801 2.654877 CGTAACCAGCTGGACGGT 59.345 61.111 39.19 21.50 38.94 4.83
2535 3858 3.076258 ATTCATGACGCTCGCCGGA 62.076 57.895 5.05 0.00 42.52 5.14
2586 3909 2.365635 GGGAGCTGCCAGACCCTA 60.366 66.667 20.97 0.00 39.28 3.53
2642 3965 3.186047 CATCCCGCCGTCGTTGAC 61.186 66.667 0.00 0.00 0.00 3.18
2721 4044 3.854669 CCGGAGCTCGCCCAGATT 61.855 66.667 7.83 0.00 37.59 2.40
2722 4045 2.587194 CGGAGCTCGCCCAGATTG 60.587 66.667 7.83 0.00 0.00 2.67
2724 4047 2.124983 GAGCTCGCCCAGATTGCA 60.125 61.111 0.00 0.00 0.00 4.08
2811 4134 1.227205 GAGCTCCCTGATCGTGCTG 60.227 63.158 0.87 0.00 33.83 4.41
2889 4212 1.299976 GACCGGGTTCAAGATGGCT 59.700 57.895 6.32 0.00 0.00 4.75
3013 4339 1.918293 CCCATCATAGGGGCCGCTA 60.918 63.158 29.63 29.63 45.60 4.26
3021 4347 1.705002 TAGGGGCCGCTATGTGCATT 61.705 55.000 24.74 1.37 43.06 3.56
3237 4563 2.616842 GGCACTGAAGACGAAAGGAAAA 59.383 45.455 0.00 0.00 0.00 2.29
3601 4927 3.303135 ACTGCGACCTCAAGCCGA 61.303 61.111 0.00 0.00 0.00 5.54
3714 5043 2.692368 ACCATCGGCATCAGGGGT 60.692 61.111 0.00 0.00 0.00 4.95
3717 5046 1.300931 CATCGGCATCAGGGGTACG 60.301 63.158 0.00 0.00 0.00 3.67
3732 5061 2.173020 TACGATCGGCTACGTCGCA 61.173 57.895 20.98 0.00 42.79 5.10
3735 5064 3.405592 GATCGGCTACGTCGCACCA 62.406 63.158 14.50 0.00 41.85 4.17
3751 5080 0.392729 ACCAGGTACGTCTCTCTCCG 60.393 60.000 0.00 0.00 0.00 4.63
3763 5092 2.946329 TCTCTCTCCGTCATGCTACTTC 59.054 50.000 0.00 0.00 0.00 3.01
3845 5174 0.447801 CATTTGCAGAGTACGGCACC 59.552 55.000 9.01 0.00 45.60 5.01
3887 5216 2.787249 GACGCGTACAGCTACGGA 59.213 61.111 13.97 0.00 45.06 4.69
4103 5432 0.585357 CGACGTCGTATTCGGAGGAT 59.415 55.000 29.08 0.00 37.69 3.24
4238 5567 1.253593 TGCACCTCATCAGAGACGCT 61.254 55.000 0.00 0.00 44.98 5.07
4247 5576 1.373497 CAGAGACGCTTGCCTTCGT 60.373 57.895 0.00 0.00 42.09 3.85
4317 5815 9.606631 AAGTGTATCTTCAGAAATCACTAATCC 57.393 33.333 10.29 0.00 34.71 3.01
4320 5818 8.981659 TGTATCTTCAGAAATCACTAATCCAGA 58.018 33.333 0.00 0.00 0.00 3.86
4334 5832 0.835276 TCCAGAGAGATGCACCATGG 59.165 55.000 11.19 11.19 0.00 3.66
4337 5835 2.286872 CAGAGAGATGCACCATGGTTC 58.713 52.381 16.84 11.94 0.00 3.62
4338 5836 1.211457 AGAGAGATGCACCATGGTTCC 59.789 52.381 16.84 10.11 0.00 3.62
4346 5844 1.614051 GCACCATGGTTCCATCTCACA 60.614 52.381 16.84 0.00 0.00 3.58
4353 5851 2.575735 TGGTTCCATCTCACATGGCTTA 59.424 45.455 0.00 0.00 39.01 3.09
4354 5852 3.202818 TGGTTCCATCTCACATGGCTTAT 59.797 43.478 0.00 0.00 39.01 1.73
4355 5853 3.567164 GGTTCCATCTCACATGGCTTATG 59.433 47.826 0.00 0.00 42.68 1.90
4356 5854 3.497103 TCCATCTCACATGGCTTATGG 57.503 47.619 11.24 11.24 41.25 2.74
4357 5855 2.107031 TCCATCTCACATGGCTTATGGG 59.893 50.000 15.31 2.62 41.78 4.00
4358 5856 2.158564 CCATCTCACATGGCTTATGGGT 60.159 50.000 0.00 0.00 41.17 4.51
4359 5857 2.715749 TCTCACATGGCTTATGGGTG 57.284 50.000 0.00 2.60 41.17 4.61
4360 5858 1.027357 CTCACATGGCTTATGGGTGC 58.973 55.000 0.00 0.00 41.17 5.01
4361 5859 0.330941 TCACATGGCTTATGGGTGCA 59.669 50.000 0.00 0.00 41.17 4.57
4387 5885 8.523915 TTAGCAAACATCTAATCATGTGGAAT 57.476 30.769 0.00 0.00 37.07 3.01
4451 5969 1.589716 GCTCCATGTGGTTCAGGTGC 61.590 60.000 0.00 0.00 36.34 5.01
4461 5979 1.239347 GTTCAGGTGCCAAGGAGTTC 58.761 55.000 0.00 0.00 0.00 3.01
4487 6005 6.894103 AGATTCCTTAGCTTCAAACATCCATT 59.106 34.615 0.00 0.00 0.00 3.16
4493 6011 3.118884 AGCTTCAAACATCCATTGCCATC 60.119 43.478 0.00 0.00 0.00 3.51
4558 6076 7.886338 ACCTTTATGAACTCATTTCTCCAAAC 58.114 34.615 0.00 0.00 37.76 2.93
4585 6103 5.609423 AGCAATTACAACTTGGCAATCAAA 58.391 33.333 0.00 0.00 34.56 2.69
4602 6120 8.299570 GGCAATCAAACAGAGAGAATTTCTTAA 58.700 33.333 0.00 0.00 35.87 1.85
4605 6123 8.627208 ATCAAACAGAGAGAATTTCTTAAGCA 57.373 30.769 0.00 0.00 35.87 3.91
4606 6124 8.450578 TCAAACAGAGAGAATTTCTTAAGCAA 57.549 30.769 0.00 0.00 35.87 3.91
4607 6125 8.902806 TCAAACAGAGAGAATTTCTTAAGCAAA 58.097 29.630 0.00 0.41 35.87 3.68
4608 6126 9.520204 CAAACAGAGAGAATTTCTTAAGCAAAA 57.480 29.630 0.00 0.00 35.87 2.44
4629 6147 5.549742 AAAAATGGAAGCTGGACAATGAA 57.450 34.783 0.00 0.00 0.00 2.57
4630 6148 5.549742 AAAATGGAAGCTGGACAATGAAA 57.450 34.783 0.00 0.00 0.00 2.69
4631 6149 4.796038 AATGGAAGCTGGACAATGAAAG 57.204 40.909 0.00 0.00 0.00 2.62
4632 6150 2.517959 TGGAAGCTGGACAATGAAAGG 58.482 47.619 0.00 0.00 0.00 3.11
4633 6151 2.108075 TGGAAGCTGGACAATGAAAGGA 59.892 45.455 0.00 0.00 0.00 3.36
4634 6152 2.751806 GGAAGCTGGACAATGAAAGGAG 59.248 50.000 0.00 0.00 0.00 3.69
4635 6153 2.503895 AGCTGGACAATGAAAGGAGG 57.496 50.000 0.00 0.00 0.00 4.30
4636 6154 0.813821 GCTGGACAATGAAAGGAGGC 59.186 55.000 0.00 0.00 0.00 4.70
5006 6550 4.165779 GACACAAAAGTTCACACCAACAG 58.834 43.478 0.00 0.00 0.00 3.16
5014 6558 0.813610 TCACACCAACAGAAGGCACG 60.814 55.000 0.00 0.00 0.00 5.34
5035 6579 0.804989 CAACAATCAAGCCTCGTCCC 59.195 55.000 0.00 0.00 0.00 4.46
5069 6619 4.090090 TCATCTTCCTTCGACTCTTCCTT 58.910 43.478 0.00 0.00 0.00 3.36
5070 6620 4.158764 TCATCTTCCTTCGACTCTTCCTTC 59.841 45.833 0.00 0.00 0.00 3.46
5071 6621 2.488545 TCTTCCTTCGACTCTTCCTTCG 59.511 50.000 0.00 0.00 36.55 3.79
5072 6622 2.195741 TCCTTCGACTCTTCCTTCGA 57.804 50.000 0.00 0.00 42.35 3.71
5101 6660 3.460340 AGACGATTCTTCCTCCTCCTCTA 59.540 47.826 0.00 0.00 0.00 2.43
5121 6695 0.374410 CATTGCGCATCGTCATGTGA 59.626 50.000 12.75 0.00 42.36 3.58
5182 6759 1.891919 GCGAAGGTGTGTGAGGCAA 60.892 57.895 0.00 0.00 0.00 4.52
5258 6835 0.537143 ACGCAAAACTCATGCCTCCA 60.537 50.000 0.00 0.00 40.72 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 4.896829 TCTCTAGCTCCGGCCGGG 62.897 72.222 42.36 32.16 39.73 5.73
25 26 2.833582 TTCTCTAGCTCCGGCCGG 60.834 66.667 39.13 39.13 39.73 6.13
26 27 2.725008 CTTCTCTAGCTCCGGCCG 59.275 66.667 21.04 21.04 39.73 6.13
27 28 1.455959 TCCTTCTCTAGCTCCGGCC 60.456 63.158 0.00 0.00 39.73 6.13
28 29 1.460273 CCTCCTTCTCTAGCTCCGGC 61.460 65.000 0.00 0.00 39.06 6.13
29 30 1.460273 GCCTCCTTCTCTAGCTCCGG 61.460 65.000 0.00 0.00 0.00 5.14
30 31 1.791103 CGCCTCCTTCTCTAGCTCCG 61.791 65.000 0.00 0.00 0.00 4.63
31 32 0.753848 ACGCCTCCTTCTCTAGCTCC 60.754 60.000 0.00 0.00 0.00 4.70
32 33 0.383949 CACGCCTCCTTCTCTAGCTC 59.616 60.000 0.00 0.00 0.00 4.09
33 34 0.033991 TCACGCCTCCTTCTCTAGCT 60.034 55.000 0.00 0.00 0.00 3.32
34 35 0.383949 CTCACGCCTCCTTCTCTAGC 59.616 60.000 0.00 0.00 0.00 3.42
35 36 1.028905 CCTCACGCCTCCTTCTCTAG 58.971 60.000 0.00 0.00 0.00 2.43
36 37 0.395862 CCCTCACGCCTCCTTCTCTA 60.396 60.000 0.00 0.00 0.00 2.43
37 38 1.684049 CCCTCACGCCTCCTTCTCT 60.684 63.158 0.00 0.00 0.00 3.10
38 39 1.671901 CTCCCTCACGCCTCCTTCTC 61.672 65.000 0.00 0.00 0.00 2.87
39 40 1.684049 CTCCCTCACGCCTCCTTCT 60.684 63.158 0.00 0.00 0.00 2.85
40 41 1.671901 CTCTCCCTCACGCCTCCTTC 61.672 65.000 0.00 0.00 0.00 3.46
41 42 1.684049 CTCTCCCTCACGCCTCCTT 60.684 63.158 0.00 0.00 0.00 3.36
42 43 2.043450 CTCTCCCTCACGCCTCCT 60.043 66.667 0.00 0.00 0.00 3.69
43 44 3.151022 CCTCTCCCTCACGCCTCC 61.151 72.222 0.00 0.00 0.00 4.30
44 45 3.151022 CCCTCTCCCTCACGCCTC 61.151 72.222 0.00 0.00 0.00 4.70
45 46 4.787280 CCCCTCTCCCTCACGCCT 62.787 72.222 0.00 0.00 0.00 5.52
46 47 4.779733 TCCCCTCTCCCTCACGCC 62.780 72.222 0.00 0.00 0.00 5.68
47 48 2.937959 ATCTCCCCTCTCCCTCACGC 62.938 65.000 0.00 0.00 0.00 5.34
48 49 0.478942 TATCTCCCCTCTCCCTCACG 59.521 60.000 0.00 0.00 0.00 4.35
49 50 1.501604 ACTATCTCCCCTCTCCCTCAC 59.498 57.143 0.00 0.00 0.00 3.51
50 51 1.783979 GACTATCTCCCCTCTCCCTCA 59.216 57.143 0.00 0.00 0.00 3.86
51 52 1.271707 CGACTATCTCCCCTCTCCCTC 60.272 61.905 0.00 0.00 0.00 4.30
52 53 0.774908 CGACTATCTCCCCTCTCCCT 59.225 60.000 0.00 0.00 0.00 4.20
53 54 0.251430 CCGACTATCTCCCCTCTCCC 60.251 65.000 0.00 0.00 0.00 4.30
54 55 0.772384 TCCGACTATCTCCCCTCTCC 59.228 60.000 0.00 0.00 0.00 3.71
55 56 1.884928 GCTCCGACTATCTCCCCTCTC 60.885 61.905 0.00 0.00 0.00 3.20
56 57 0.111639 GCTCCGACTATCTCCCCTCT 59.888 60.000 0.00 0.00 0.00 3.69
57 58 0.111639 AGCTCCGACTATCTCCCCTC 59.888 60.000 0.00 0.00 0.00 4.30
58 59 0.558712 AAGCTCCGACTATCTCCCCT 59.441 55.000 0.00 0.00 0.00 4.79
59 60 1.341852 GAAAGCTCCGACTATCTCCCC 59.658 57.143 0.00 0.00 0.00 4.81
60 61 2.312390 AGAAAGCTCCGACTATCTCCC 58.688 52.381 0.00 0.00 0.00 4.30
61 62 3.884091 TGTAGAAAGCTCCGACTATCTCC 59.116 47.826 0.00 0.00 0.00 3.71
62 63 4.577283 AGTGTAGAAAGCTCCGACTATCTC 59.423 45.833 0.00 0.00 0.00 2.75
63 64 4.528920 AGTGTAGAAAGCTCCGACTATCT 58.471 43.478 0.00 0.00 0.00 1.98
64 65 4.904253 AGTGTAGAAAGCTCCGACTATC 57.096 45.455 0.00 0.00 0.00 2.08
65 66 6.546403 TGAATAGTGTAGAAAGCTCCGACTAT 59.454 38.462 0.00 0.00 0.00 2.12
66 67 5.884232 TGAATAGTGTAGAAAGCTCCGACTA 59.116 40.000 0.00 0.00 0.00 2.59
67 68 4.705507 TGAATAGTGTAGAAAGCTCCGACT 59.294 41.667 0.00 0.00 0.00 4.18
68 69 4.799428 GTGAATAGTGTAGAAAGCTCCGAC 59.201 45.833 0.00 0.00 0.00 4.79
69 70 4.461431 TGTGAATAGTGTAGAAAGCTCCGA 59.539 41.667 0.00 0.00 0.00 4.55
70 71 4.744570 TGTGAATAGTGTAGAAAGCTCCG 58.255 43.478 0.00 0.00 0.00 4.63
71 72 6.091441 CAGTTGTGAATAGTGTAGAAAGCTCC 59.909 42.308 0.00 0.00 0.00 4.70
72 73 6.401581 GCAGTTGTGAATAGTGTAGAAAGCTC 60.402 42.308 0.00 0.00 0.00 4.09
73 74 5.409826 GCAGTTGTGAATAGTGTAGAAAGCT 59.590 40.000 0.00 0.00 0.00 3.74
74 75 5.409826 AGCAGTTGTGAATAGTGTAGAAAGC 59.590 40.000 0.00 0.00 0.00 3.51
75 76 6.619446 GCAGCAGTTGTGAATAGTGTAGAAAG 60.619 42.308 0.00 0.00 0.00 2.62
76 77 5.179368 GCAGCAGTTGTGAATAGTGTAGAAA 59.821 40.000 0.00 0.00 0.00 2.52
77 78 4.690748 GCAGCAGTTGTGAATAGTGTAGAA 59.309 41.667 0.00 0.00 0.00 2.10
78 79 4.245660 GCAGCAGTTGTGAATAGTGTAGA 58.754 43.478 0.00 0.00 0.00 2.59
79 80 3.996363 TGCAGCAGTTGTGAATAGTGTAG 59.004 43.478 0.00 0.00 0.00 2.74
80 81 4.001618 TGCAGCAGTTGTGAATAGTGTA 57.998 40.909 0.00 0.00 0.00 2.90
81 82 2.849942 TGCAGCAGTTGTGAATAGTGT 58.150 42.857 0.00 0.00 0.00 3.55
82 83 4.155462 AGAATGCAGCAGTTGTGAATAGTG 59.845 41.667 0.00 0.00 0.00 2.74
83 84 4.330250 AGAATGCAGCAGTTGTGAATAGT 58.670 39.130 0.00 0.00 0.00 2.12
84 85 4.959596 AGAATGCAGCAGTTGTGAATAG 57.040 40.909 0.00 0.00 0.00 1.73
85 86 4.082625 CCAAGAATGCAGCAGTTGTGAATA 60.083 41.667 0.00 0.00 0.00 1.75
86 87 3.305813 CCAAGAATGCAGCAGTTGTGAAT 60.306 43.478 0.00 0.00 0.00 2.57
87 88 2.034939 CCAAGAATGCAGCAGTTGTGAA 59.965 45.455 0.00 0.00 0.00 3.18
88 89 1.610038 CCAAGAATGCAGCAGTTGTGA 59.390 47.619 0.00 0.00 0.00 3.58
89 90 1.933500 GCCAAGAATGCAGCAGTTGTG 60.934 52.381 0.00 0.31 0.00 3.33
90 91 0.316204 GCCAAGAATGCAGCAGTTGT 59.684 50.000 0.00 0.00 0.00 3.32
91 92 0.601558 AGCCAAGAATGCAGCAGTTG 59.398 50.000 0.00 4.65 0.00 3.16
92 93 1.335145 AAGCCAAGAATGCAGCAGTT 58.665 45.000 0.00 0.00 0.00 3.16
93 94 2.205022 TAAGCCAAGAATGCAGCAGT 57.795 45.000 0.00 0.00 0.00 4.40
94 95 2.950309 AGATAAGCCAAGAATGCAGCAG 59.050 45.455 0.00 0.00 0.00 4.24
95 96 3.008835 AGATAAGCCAAGAATGCAGCA 57.991 42.857 0.00 0.00 0.00 4.41
96 97 3.243334 GGAAGATAAGCCAAGAATGCAGC 60.243 47.826 0.00 0.00 0.00 5.25
97 98 3.949754 TGGAAGATAAGCCAAGAATGCAG 59.050 43.478 0.00 0.00 0.00 4.41
98 99 3.966979 TGGAAGATAAGCCAAGAATGCA 58.033 40.909 0.00 0.00 0.00 3.96
99 100 4.581824 TGATGGAAGATAAGCCAAGAATGC 59.418 41.667 0.00 0.00 37.78 3.56
100 101 5.591472 TGTGATGGAAGATAAGCCAAGAATG 59.409 40.000 0.00 0.00 37.78 2.67
101 102 5.759059 TGTGATGGAAGATAAGCCAAGAAT 58.241 37.500 0.00 0.00 37.78 2.40
102 103 5.178096 TGTGATGGAAGATAAGCCAAGAA 57.822 39.130 0.00 0.00 37.78 2.52
103 104 4.842531 TGTGATGGAAGATAAGCCAAGA 57.157 40.909 0.00 0.00 37.78 3.02
104 105 4.212847 CGATGTGATGGAAGATAAGCCAAG 59.787 45.833 0.00 0.00 37.78 3.61
105 106 4.129380 CGATGTGATGGAAGATAAGCCAA 58.871 43.478 0.00 0.00 37.78 4.52
106 107 3.494924 CCGATGTGATGGAAGATAAGCCA 60.495 47.826 0.00 0.00 38.78 4.75
107 108 3.070018 CCGATGTGATGGAAGATAAGCC 58.930 50.000 0.00 0.00 0.00 4.35
108 109 2.481952 GCCGATGTGATGGAAGATAAGC 59.518 50.000 0.00 0.00 0.00 3.09
109 110 3.732212 TGCCGATGTGATGGAAGATAAG 58.268 45.455 0.00 0.00 0.00 1.73
110 111 3.134623 ACTGCCGATGTGATGGAAGATAA 59.865 43.478 0.00 0.00 34.21 1.75
111 112 2.700371 ACTGCCGATGTGATGGAAGATA 59.300 45.455 0.00 0.00 34.21 1.98
112 113 1.487976 ACTGCCGATGTGATGGAAGAT 59.512 47.619 0.00 0.00 34.21 2.40
113 114 0.904649 ACTGCCGATGTGATGGAAGA 59.095 50.000 0.00 0.00 34.21 2.87
114 115 1.742761 AACTGCCGATGTGATGGAAG 58.257 50.000 0.00 0.00 36.91 3.46
115 116 2.083774 GAAACTGCCGATGTGATGGAA 58.916 47.619 0.00 0.00 0.00 3.53
116 117 1.737838 GAAACTGCCGATGTGATGGA 58.262 50.000 0.00 0.00 0.00 3.41
117 118 0.374758 CGAAACTGCCGATGTGATGG 59.625 55.000 0.00 0.00 0.00 3.51
118 119 0.374758 CCGAAACTGCCGATGTGATG 59.625 55.000 0.00 0.00 0.00 3.07
119 120 0.036388 ACCGAAACTGCCGATGTGAT 60.036 50.000 0.00 0.00 0.00 3.06
120 121 0.250124 AACCGAAACTGCCGATGTGA 60.250 50.000 0.00 0.00 0.00 3.58
121 122 1.434555 TAACCGAAACTGCCGATGTG 58.565 50.000 0.00 0.00 0.00 3.21
122 123 2.172851 TTAACCGAAACTGCCGATGT 57.827 45.000 0.00 0.00 0.00 3.06
123 124 3.757745 AATTAACCGAAACTGCCGATG 57.242 42.857 0.00 0.00 0.00 3.84
124 125 4.457949 AGAAAATTAACCGAAACTGCCGAT 59.542 37.500 0.00 0.00 0.00 4.18
125 126 3.816523 AGAAAATTAACCGAAACTGCCGA 59.183 39.130 0.00 0.00 0.00 5.54
126 127 4.155310 AGAAAATTAACCGAAACTGCCG 57.845 40.909 0.00 0.00 0.00 5.69
127 128 4.482386 GGAGAAAATTAACCGAAACTGCC 58.518 43.478 0.00 0.00 0.00 4.85
128 129 4.482386 GGGAGAAAATTAACCGAAACTGC 58.518 43.478 0.00 0.00 0.00 4.40
135 136 0.736636 GGCCGGGAGAAAATTAACCG 59.263 55.000 2.18 0.00 43.89 4.44
136 137 0.736636 CGGCCGGGAGAAAATTAACC 59.263 55.000 20.10 0.00 0.00 2.85
137 138 0.099968 GCGGCCGGGAGAAAATTAAC 59.900 55.000 29.38 0.17 0.00 2.01
138 139 1.370587 CGCGGCCGGGAGAAAATTAA 61.371 55.000 36.48 0.00 0.00 1.40
139 140 1.816259 CGCGGCCGGGAGAAAATTA 60.816 57.895 36.48 0.00 0.00 1.40
140 141 2.886730 ATCGCGGCCGGGAGAAAATT 62.887 55.000 41.50 26.02 40.35 1.82
141 142 3.400599 ATCGCGGCCGGGAGAAAAT 62.401 57.895 41.50 26.71 40.35 1.82
142 143 4.090588 ATCGCGGCCGGGAGAAAA 62.091 61.111 41.50 24.52 40.35 2.29
143 144 4.524318 GATCGCGGCCGGGAGAAA 62.524 66.667 41.50 24.88 40.35 2.52
151 152 4.176752 AAGAAGGGGATCGCGGCC 62.177 66.667 6.13 8.49 0.00 6.13
152 153 2.589159 GAAGAAGGGGATCGCGGC 60.589 66.667 6.13 0.00 0.00 6.53
153 154 1.972660 AAGGAAGAAGGGGATCGCGG 61.973 60.000 6.13 0.00 0.00 6.46
154 155 0.530870 GAAGGAAGAAGGGGATCGCG 60.531 60.000 0.00 0.00 0.00 5.87
198 199 2.442188 GCAAGTACCGACGGCGAAG 61.442 63.158 15.16 0.00 40.82 3.79
199 200 2.431260 GCAAGTACCGACGGCGAA 60.431 61.111 15.16 0.00 40.82 4.70
206 316 4.124351 CGCTCCCGCAAGTACCGA 62.124 66.667 0.00 0.00 35.30 4.69
220 330 2.435234 TTATTTCGTGCGCCCGCT 60.435 55.556 7.61 0.00 42.51 5.52
222 332 2.022762 GCTTATTTCGTGCGCCCG 59.977 61.111 5.73 5.73 0.00 6.13
228 338 2.349648 CGCGCCGCTTATTTCGTG 60.350 61.111 7.78 0.00 0.00 4.35
229 339 2.812178 ACGCGCCGCTTATTTCGT 60.812 55.556 5.73 0.00 0.00 3.85
230 340 2.089433 ATCACGCGCCGCTTATTTCG 62.089 55.000 5.73 0.00 0.00 3.46
232 342 1.351707 CATCACGCGCCGCTTATTT 59.648 52.632 5.73 0.00 0.00 1.40
233 343 3.014036 CATCACGCGCCGCTTATT 58.986 55.556 5.73 0.00 0.00 1.40
234 344 3.640000 GCATCACGCGCCGCTTAT 61.640 61.111 5.73 0.00 0.00 1.73
240 350 4.811761 GAAACGGCATCACGCGCC 62.812 66.667 5.73 0.00 46.62 6.53
244 354 2.395690 GAGCGAAACGGCATCACG 59.604 61.111 0.00 0.00 40.31 4.35
245 355 2.785258 GGAGCGAAACGGCATCAC 59.215 61.111 0.00 0.00 34.64 3.06
246 356 2.813474 CGGAGCGAAACGGCATCA 60.813 61.111 0.00 0.00 34.64 3.07
272 382 1.094785 GCTTCAGCGGAGGCATAAAA 58.905 50.000 15.79 0.00 44.87 1.52
273 383 2.780595 GCTTCAGCGGAGGCATAAA 58.219 52.632 15.79 0.00 44.87 1.40
274 384 4.540153 GCTTCAGCGGAGGCATAA 57.460 55.556 15.79 0.00 44.87 1.90
292 402 0.911184 CACGCACAACCGTTTCAAAC 59.089 50.000 0.00 0.00 39.83 2.93
294 404 1.226435 GCACGCACAACCGTTTCAA 60.226 52.632 0.00 0.00 39.83 2.69
295 405 1.923227 TTGCACGCACAACCGTTTCA 61.923 50.000 0.00 0.00 39.83 2.69
296 406 0.798771 TTTGCACGCACAACCGTTTC 60.799 50.000 0.00 0.00 39.83 2.78
298 408 0.388649 TTTTTGCACGCACAACCGTT 60.389 45.000 0.00 0.00 39.83 4.44
299 409 1.213013 TTTTTGCACGCACAACCGT 59.787 47.368 0.00 0.00 43.11 4.83
300 410 4.079090 TTTTTGCACGCACAACCG 57.921 50.000 0.00 0.00 0.00 4.44
315 425 4.676986 GCCTCGCCGGAAAAATTAGATTTT 60.677 41.667 5.05 0.00 43.83 1.82
316 426 3.181490 GCCTCGCCGGAAAAATTAGATTT 60.181 43.478 5.05 0.00 33.16 2.17
317 427 2.357952 GCCTCGCCGGAAAAATTAGATT 59.642 45.455 5.05 0.00 33.16 2.40
318 428 1.947456 GCCTCGCCGGAAAAATTAGAT 59.053 47.619 5.05 0.00 33.16 1.98
319 429 1.339247 TGCCTCGCCGGAAAAATTAGA 60.339 47.619 5.05 0.00 33.16 2.10
322 432 0.893727 AGTGCCTCGCCGGAAAAATT 60.894 50.000 5.05 0.00 33.16 1.82
323 433 0.035820 TAGTGCCTCGCCGGAAAAAT 60.036 50.000 5.05 0.00 33.16 1.82
324 434 0.250381 TTAGTGCCTCGCCGGAAAAA 60.250 50.000 5.05 0.00 33.16 1.94
325 435 0.035820 ATTAGTGCCTCGCCGGAAAA 60.036 50.000 5.05 0.00 33.16 2.29
326 436 0.825410 TATTAGTGCCTCGCCGGAAA 59.175 50.000 5.05 0.00 33.16 3.13
328 438 0.601558 GATATTAGTGCCTCGCCGGA 59.398 55.000 5.05 0.00 33.16 5.14
333 443 1.665544 CGCGCGATATTAGTGCCTCG 61.666 60.000 28.94 0.00 41.62 4.63
334 444 1.945776 GCGCGCGATATTAGTGCCTC 61.946 60.000 37.18 6.74 41.62 4.70
335 445 2.022129 GCGCGCGATATTAGTGCCT 61.022 57.895 37.18 0.00 41.62 4.75
336 446 1.626654 ATGCGCGCGATATTAGTGCC 61.627 55.000 37.18 12.22 41.62 5.01
337 447 0.517132 CATGCGCGCGATATTAGTGC 60.517 55.000 37.18 13.07 41.27 4.40
340 450 1.462378 CCAACATGCGCGCGATATTAG 60.462 52.381 37.18 17.90 0.00 1.73
341 451 0.510790 CCAACATGCGCGCGATATTA 59.489 50.000 37.18 13.84 0.00 0.98
342 452 1.157257 TCCAACATGCGCGCGATATT 61.157 50.000 37.18 18.36 0.00 1.28
344 454 2.202810 TCCAACATGCGCGCGATA 60.203 55.556 37.18 22.37 0.00 2.92
345 455 3.566853 CTCCAACATGCGCGCGAT 61.567 61.111 37.18 21.00 0.00 4.58
346 456 4.733371 TCTCCAACATGCGCGCGA 62.733 61.111 37.18 19.53 0.00 5.87
347 457 3.566853 ATCTCCAACATGCGCGCG 61.567 61.111 28.44 28.44 0.00 6.86
348 458 2.023741 CATCTCCAACATGCGCGC 59.976 61.111 27.26 27.26 0.00 6.86
349 459 2.023741 GCATCTCCAACATGCGCG 59.976 61.111 0.00 0.00 37.51 6.86
352 462 1.400846 CTGACAGCATCTCCAACATGC 59.599 52.381 0.00 0.00 46.05 4.06
354 464 1.281287 AGCTGACAGCATCTCCAACAT 59.719 47.619 28.43 1.30 45.56 2.71
356 466 2.167281 TCTAGCTGACAGCATCTCCAAC 59.833 50.000 28.43 0.00 45.56 3.77
357 467 2.167281 GTCTAGCTGACAGCATCTCCAA 59.833 50.000 28.43 4.60 45.56 3.53
359 469 1.268999 CGTCTAGCTGACAGCATCTCC 60.269 57.143 28.43 11.33 45.56 3.71
361 471 1.403679 GACGTCTAGCTGACAGCATCT 59.596 52.381 28.43 11.37 45.56 2.90
362 472 1.133216 TGACGTCTAGCTGACAGCATC 59.867 52.381 28.43 15.21 45.56 3.91
364 474 0.241213 GTGACGTCTAGCTGACAGCA 59.759 55.000 28.43 13.75 45.56 4.41
365 475 0.456995 GGTGACGTCTAGCTGACAGC 60.457 60.000 20.12 20.12 45.60 4.40
366 476 3.704381 GGTGACGTCTAGCTGACAG 57.296 57.895 17.92 0.00 45.60 3.51
390 541 2.927856 ACAGGGATGCCGTGGTCA 60.928 61.111 10.48 0.00 42.89 4.02
392 543 2.607750 AGACAGGGATGCCGTGGT 60.608 61.111 10.48 1.98 42.89 4.16
395 546 3.083997 GGGAGACAGGGATGCCGT 61.084 66.667 0.00 0.00 0.00 5.68
400 551 0.916358 CACCAAGGGGAGACAGGGAT 60.916 60.000 0.00 0.00 38.05 3.85
402 553 3.081554 CACCAAGGGGAGACAGGG 58.918 66.667 0.00 0.00 38.05 4.45
428 579 1.144057 GTCGATTCTCCCATGCCGT 59.856 57.895 0.00 0.00 0.00 5.68
429 580 1.595382 GGTCGATTCTCCCATGCCG 60.595 63.158 0.00 0.00 0.00 5.69
430 581 1.595382 CGGTCGATTCTCCCATGCC 60.595 63.158 0.00 0.00 0.00 4.40
431 582 0.598680 CTCGGTCGATTCTCCCATGC 60.599 60.000 0.00 0.00 0.00 4.06
432 583 0.032678 CCTCGGTCGATTCTCCCATG 59.967 60.000 0.00 0.00 0.00 3.66
433 584 1.749334 GCCTCGGTCGATTCTCCCAT 61.749 60.000 0.00 0.00 0.00 4.00
458 609 7.201947 GCTATTCCTCCTGCAATTAGGATTTTT 60.202 37.037 11.10 2.43 45.44 1.94
459 610 6.266330 GCTATTCCTCCTGCAATTAGGATTTT 59.734 38.462 11.10 4.30 45.44 1.82
471 622 2.026641 TGCATTTGCTATTCCTCCTGC 58.973 47.619 3.94 0.00 42.66 4.85
473 624 5.945144 AATTTGCATTTGCTATTCCTCCT 57.055 34.783 3.94 0.00 42.66 3.69
474 625 9.933723 AATATAATTTGCATTTGCTATTCCTCC 57.066 29.630 3.94 0.00 42.66 4.30
483 634 9.196552 GAAGGGAGTAATATAATTTGCATTTGC 57.803 33.333 0.00 0.00 42.50 3.68
487 638 9.247861 GGATGAAGGGAGTAATATAATTTGCAT 57.752 33.333 0.00 0.00 0.00 3.96
488 639 7.669722 GGGATGAAGGGAGTAATATAATTTGCA 59.330 37.037 0.00 0.00 0.00 4.08
489 640 7.669722 TGGGATGAAGGGAGTAATATAATTTGC 59.330 37.037 0.00 0.00 0.00 3.68
496 647 8.468547 ACATTATGGGATGAAGGGAGTAATAT 57.531 34.615 0.00 0.00 0.00 1.28
497 648 7.888514 ACATTATGGGATGAAGGGAGTAATA 57.111 36.000 0.00 0.00 0.00 0.98
498 649 6.786843 ACATTATGGGATGAAGGGAGTAAT 57.213 37.500 0.00 0.00 0.00 1.89
499 650 7.570982 TCTTACATTATGGGATGAAGGGAGTAA 59.429 37.037 0.00 0.00 0.00 2.24
500 651 7.016268 GTCTTACATTATGGGATGAAGGGAGTA 59.984 40.741 0.00 0.00 0.00 2.59
501 652 5.911178 TCTTACATTATGGGATGAAGGGAGT 59.089 40.000 0.00 0.00 0.00 3.85
502 653 6.234177 GTCTTACATTATGGGATGAAGGGAG 58.766 44.000 0.00 0.00 0.00 4.30
503 654 5.221641 CGTCTTACATTATGGGATGAAGGGA 60.222 44.000 0.00 0.00 0.00 4.20
504 655 4.997395 CGTCTTACATTATGGGATGAAGGG 59.003 45.833 0.00 0.00 0.00 3.95
506 657 7.553881 AAACGTCTTACATTATGGGATGAAG 57.446 36.000 0.00 0.00 0.00 3.02
507 658 7.931578 AAAACGTCTTACATTATGGGATGAA 57.068 32.000 0.00 0.00 0.00 2.57
530 1386 2.271777 ACTCCCTCCGTCCCATAAAAA 58.728 47.619 0.00 0.00 0.00 1.94
533 1389 1.572415 ACTACTCCCTCCGTCCCATAA 59.428 52.381 0.00 0.00 0.00 1.90
535 1391 0.338814 AACTACTCCCTCCGTCCCAT 59.661 55.000 0.00 0.00 0.00 4.00
540 1396 1.823610 GTTGCTAACTACTCCCTCCGT 59.176 52.381 0.00 0.00 0.00 4.69
542 1398 3.451178 TCATGTTGCTAACTACTCCCTCC 59.549 47.826 0.00 0.00 0.00 4.30
544 1400 5.499004 TTTCATGTTGCTAACTACTCCCT 57.501 39.130 0.00 0.00 0.00 4.20
574 1802 4.580167 TGTCTGCTGGAATAATTGCCATAC 59.420 41.667 0.00 0.00 32.89 2.39
613 1842 5.237236 ACTGGCTGCTAACCTAGTTTTTA 57.763 39.130 0.00 0.00 0.00 1.52
617 1846 3.412386 CAAACTGGCTGCTAACCTAGTT 58.588 45.455 0.00 0.00 33.08 2.24
653 1882 4.321899 GGCACTTGGTTGAGATTATTTGCA 60.322 41.667 0.00 0.00 0.00 4.08
654 1883 4.082026 AGGCACTTGGTTGAGATTATTTGC 60.082 41.667 0.00 0.00 27.25 3.68
690 1919 3.730963 GCAGTTCGACATAGTGATCGTGA 60.731 47.826 0.00 0.00 39.38 4.35
700 1964 3.586100 TGTTAGCAGCAGTTCGACATA 57.414 42.857 0.00 0.00 0.00 2.29
711 1975 0.512952 CACGACAGGTTGTTAGCAGC 59.487 55.000 0.00 0.00 0.00 5.25
712 1976 1.865865 ACACGACAGGTTGTTAGCAG 58.134 50.000 0.00 0.00 0.00 4.24
714 1978 2.475487 GAGAACACGACAGGTTGTTAGC 59.525 50.000 0.00 0.00 0.00 3.09
805 2094 3.603532 CGAGTACACAGTCAGGTAGGTA 58.396 50.000 0.00 0.00 0.00 3.08
806 2095 2.434428 CGAGTACACAGTCAGGTAGGT 58.566 52.381 0.00 0.00 0.00 3.08
807 2096 1.743958 CCGAGTACACAGTCAGGTAGG 59.256 57.143 0.00 0.00 0.00 3.18
808 2097 2.419324 GACCGAGTACACAGTCAGGTAG 59.581 54.545 2.22 0.00 33.77 3.18
809 2098 2.039480 AGACCGAGTACACAGTCAGGTA 59.961 50.000 9.00 0.00 33.77 3.08
812 2101 2.095668 GTGAGACCGAGTACACAGTCAG 60.096 54.545 9.00 0.00 34.05 3.51
813 2102 1.878088 GTGAGACCGAGTACACAGTCA 59.122 52.381 9.00 0.00 34.05 3.41
814 2103 2.152830 AGTGAGACCGAGTACACAGTC 58.847 52.381 0.00 0.00 35.97 3.51
815 2104 2.273538 AGTGAGACCGAGTACACAGT 57.726 50.000 0.00 0.00 35.97 3.55
856 2179 2.513753 TGTGCATGGTCAAAGGGTAAG 58.486 47.619 0.00 0.00 0.00 2.34
857 2180 2.666272 TGTGCATGGTCAAAGGGTAA 57.334 45.000 0.00 0.00 0.00 2.85
858 2181 2.897271 ATGTGCATGGTCAAAGGGTA 57.103 45.000 0.00 0.00 0.00 3.69
859 2182 2.224992 TGTATGTGCATGGTCAAAGGGT 60.225 45.455 0.00 0.00 0.00 4.34
860 2183 2.445427 TGTATGTGCATGGTCAAAGGG 58.555 47.619 0.00 0.00 0.00 3.95
861 2184 4.036734 GGTATGTATGTGCATGGTCAAAGG 59.963 45.833 0.00 0.00 0.00 3.11
877 2200 8.636213 GGTTAACTCATACAGCTAAGGTATGTA 58.364 37.037 17.54 3.05 45.23 2.29
880 2203 7.670605 TGGTTAACTCATACAGCTAAGGTAT 57.329 36.000 5.42 0.00 31.81 2.73
881 2204 7.108841 CTGGTTAACTCATACAGCTAAGGTA 57.891 40.000 5.42 0.00 0.00 3.08
882 2205 5.978814 CTGGTTAACTCATACAGCTAAGGT 58.021 41.667 5.42 0.00 0.00 3.50
896 2219 0.949105 CAAGTCGCGGCTGGTTAACT 60.949 55.000 16.93 0.00 0.00 2.24
898 2221 0.036765 ATCAAGTCGCGGCTGGTTAA 60.037 50.000 16.93 0.00 0.00 2.01
901 2224 2.125512 GATCAAGTCGCGGCTGGT 60.126 61.111 16.93 4.48 0.00 4.00
919 2242 4.646945 TGAATAAATGGAGAGAGCTCGAGT 59.353 41.667 15.13 0.23 42.25 4.18
926 2249 5.469421 GCATGGTCTGAATAAATGGAGAGAG 59.531 44.000 0.00 0.00 0.00 3.20
927 2250 5.371526 GCATGGTCTGAATAAATGGAGAGA 58.628 41.667 0.00 0.00 0.00 3.10
968 2291 0.802222 CGTGGTCGTCGAATGCTGAT 60.802 55.000 0.00 0.00 0.00 2.90
969 2292 1.443702 CGTGGTCGTCGAATGCTGA 60.444 57.895 0.00 0.00 0.00 4.26
970 2293 2.444624 CCGTGGTCGTCGAATGCTG 61.445 63.158 0.00 0.00 35.01 4.41
971 2294 2.126071 CCGTGGTCGTCGAATGCT 60.126 61.111 0.00 0.00 35.01 3.79
985 2308 2.592993 CCATGGTGGTCTGGTCCGT 61.593 63.158 2.57 0.00 31.35 4.69
1306 2629 1.153086 CAAGGCTCTCCGGAATGGG 60.153 63.158 5.23 0.00 38.76 4.00
1316 2639 3.764466 CGAGTCGGCCAAGGCTCT 61.764 66.667 11.40 7.29 40.49 4.09
1317 2640 4.821589 CCGAGTCGGCCAAGGCTC 62.822 72.222 20.50 2.31 41.17 4.70
1329 2652 1.823041 GTAGTAGAGGCGCCCGAGT 60.823 63.158 26.15 15.86 0.00 4.18
1346 2669 2.210013 TTGTCGCAGAGGCTGAGGT 61.210 57.895 0.00 0.00 36.95 3.85
1474 2797 2.342650 GCATGGCCAGCTTCGGAAA 61.343 57.895 13.05 0.00 0.00 3.13
1476 2799 3.720601 AGCATGGCCAGCTTCGGA 61.721 61.111 20.03 0.00 39.87 4.55
1488 2811 3.047718 CTTGGTCAGCCGCAGCATG 62.048 63.158 0.00 0.00 43.56 4.06
1489 2812 2.749044 CTTGGTCAGCCGCAGCAT 60.749 61.111 0.00 0.00 43.56 3.79
1495 2818 2.383527 GCGAGTTCTTGGTCAGCCG 61.384 63.158 0.00 0.00 37.67 5.52
1496 2819 1.004440 AGCGAGTTCTTGGTCAGCC 60.004 57.895 0.00 0.00 0.00 4.85
1500 2823 0.456995 CGGAGAGCGAGTTCTTGGTC 60.457 60.000 10.27 10.27 0.00 4.02
1502 2825 1.153745 CCGGAGAGCGAGTTCTTGG 60.154 63.158 0.00 0.00 0.00 3.61
1542 2865 3.557264 GGTTCTCGATGGTCTTGAGGTTT 60.557 47.826 0.00 0.00 36.20 3.27
1558 2881 1.009449 CGGCGAGATCGAGGTTCTC 60.009 63.158 0.00 4.71 43.02 2.87
1569 2892 2.676822 AGCAGGTTCTCGGCGAGA 60.677 61.111 33.80 33.80 41.48 4.04
1614 2937 3.798954 CTGGAGATTCGGGAGGCGC 62.799 68.421 0.00 0.00 0.00 6.53
1625 2948 1.971357 ACACCGTGAAGAACTGGAGAT 59.029 47.619 5.28 0.00 0.00 2.75
1626 2949 1.410004 ACACCGTGAAGAACTGGAGA 58.590 50.000 5.28 0.00 0.00 3.71
1634 2957 1.342174 GGTTCTGGTACACCGTGAAGA 59.658 52.381 5.28 0.17 39.43 2.87
1635 2958 1.792006 GGTTCTGGTACACCGTGAAG 58.208 55.000 5.28 0.00 39.43 3.02
1641 2964 1.079336 GAGGCGGTTCTGGTACACC 60.079 63.158 0.00 0.00 0.00 4.16
1860 3183 2.096819 GGTGAAGCTGTTGTTCGACAAA 59.903 45.455 0.00 0.00 40.15 2.83
1866 3189 0.586802 GACCGGTGAAGCTGTTGTTC 59.413 55.000 14.63 0.00 0.00 3.18
2008 3331 0.744874 CCGCCGAGGAATAGTTCAGA 59.255 55.000 0.00 0.00 45.00 3.27
2014 3337 0.742990 TTGTTGCCGCCGAGGAATAG 60.743 55.000 0.91 0.00 45.00 1.73
2046 3369 3.040763 GCGATGGAGCTCGGCATC 61.041 66.667 18.10 18.10 39.05 3.91
2133 3456 3.001902 TAGCCCGACGAGGTTGCTG 62.002 63.158 0.00 0.00 37.91 4.41
2134 3457 2.678934 TAGCCCGACGAGGTTGCT 60.679 61.111 0.00 0.00 40.09 3.91
2214 3537 2.097038 CAGCTCTTGGAGGTTCGCG 61.097 63.158 0.00 0.00 38.40 5.87
2216 3539 1.546476 AGTACAGCTCTTGGAGGTTCG 59.454 52.381 0.00 0.00 38.40 3.95
2233 3556 1.192146 AGCTCGTTCCCCTGCAAGTA 61.192 55.000 0.00 0.00 0.00 2.24
2235 3558 2.037136 CAGCTCGTTCCCCTGCAAG 61.037 63.158 0.00 0.00 0.00 4.01
2315 3638 0.865769 CGACCCGTTCAAAGAGTTGG 59.134 55.000 0.00 0.00 35.29 3.77
2322 3645 2.830264 CGGAATCGACCCGTTCAAA 58.170 52.632 17.17 0.00 41.91 2.69
2365 3688 1.367659 GAGAGGTTGAGCAGCATCAC 58.632 55.000 0.00 0.00 0.00 3.06
2517 3840 2.572095 TTCCGGCGAGCGTCATGAAT 62.572 55.000 9.30 0.00 0.00 2.57
2636 3959 0.951558 CCCCTTCAACTTGGTCAACG 59.048 55.000 0.00 0.00 0.00 4.10
2642 3965 0.610232 CCTGAGCCCCTTCAACTTGG 60.610 60.000 0.00 0.00 0.00 3.61
2811 4134 2.589442 TTGTTGCCGGACACGTCC 60.589 61.111 5.05 6.12 46.18 4.79
3013 4339 1.468520 GAACAGTACGGCAATGCACAT 59.531 47.619 7.79 0.00 0.00 3.21
3021 4347 1.007038 GACGGTGAACAGTACGGCA 60.007 57.895 0.00 0.00 33.82 5.69
3051 4377 0.608308 TCCTCGACTTCCTCTTGCGA 60.608 55.000 0.00 0.00 0.00 5.10
3256 4582 2.111043 CACCTTCACTGCCACGGT 59.889 61.111 0.00 0.00 0.00 4.83
3495 4821 1.611851 CCTCTGGACCAGGCTCAGT 60.612 63.158 21.56 0.00 31.51 3.41
3517 4843 3.272334 GATGTCCACGGCGATGCC 61.272 66.667 16.62 0.00 46.75 4.40
3714 5043 2.173020 TGCGACGTAGCCGATCGTA 61.173 57.895 18.26 0.00 40.39 3.43
3717 5046 2.654404 GGTGCGACGTAGCCGATC 60.654 66.667 18.26 6.03 37.88 3.69
3732 5061 0.392729 CGGAGAGAGACGTACCTGGT 60.393 60.000 4.05 4.05 0.00 4.00
3735 5064 0.612229 TGACGGAGAGAGACGTACCT 59.388 55.000 0.00 0.00 44.24 3.08
3751 5080 3.550437 ATGGTGGAGAAGTAGCATGAC 57.450 47.619 0.00 0.00 34.10 3.06
3763 5092 0.253894 TCTGACATGCCATGGTGGAG 59.746 55.000 14.67 5.58 40.96 3.86
3887 5216 0.031616 GGATCTCCAGGAGGGTCACT 60.032 60.000 17.10 0.00 38.11 3.41
4238 5567 3.659092 CCGCAAGCACGAAGGCAA 61.659 61.111 0.00 0.00 35.83 4.52
4316 5814 0.545171 ACCATGGTGCATCTCTCTGG 59.455 55.000 18.99 2.78 0.00 3.86
4317 5815 2.286872 GAACCATGGTGCATCTCTCTG 58.713 52.381 20.60 0.00 0.00 3.35
4320 5818 0.994247 TGGAACCATGGTGCATCTCT 59.006 50.000 24.87 3.64 0.00 3.10
4334 5832 3.567164 CCATAAGCCATGTGAGATGGAAC 59.433 47.826 13.43 0.00 41.64 3.62
4337 5835 2.158564 ACCCATAAGCCATGTGAGATGG 60.159 50.000 3.91 3.91 41.99 3.51
4338 5836 2.882761 CACCCATAAGCCATGTGAGATG 59.117 50.000 0.00 0.00 32.21 2.90
4346 5844 2.242043 GCTAATGCACCCATAAGCCAT 58.758 47.619 0.00 0.00 39.41 4.40
4357 5855 7.166970 CACATGATTAGATGTTTGCTAATGCAC 59.833 37.037 0.00 0.00 40.72 4.57
4358 5856 7.197703 CACATGATTAGATGTTTGCTAATGCA 58.802 34.615 0.00 0.00 39.92 3.96
4359 5857 6.639686 CCACATGATTAGATGTTTGCTAATGC 59.360 38.462 0.00 0.00 38.35 3.56
4360 5858 7.933396 TCCACATGATTAGATGTTTGCTAATG 58.067 34.615 0.00 0.00 38.35 1.90
4361 5859 8.523915 TTCCACATGATTAGATGTTTGCTAAT 57.476 30.769 0.00 0.00 40.30 1.73
4419 5917 6.562228 ACCACATGGAGCTATACCTATCTTA 58.438 40.000 4.53 0.00 38.94 2.10
4430 5928 1.278985 CACCTGAACCACATGGAGCTA 59.721 52.381 4.53 0.00 38.94 3.32
4461 5979 5.649395 TGGATGTTTGAAGCTAAGGAATCTG 59.351 40.000 0.00 0.00 0.00 2.90
4487 6005 3.202151 CCTTTTAAGGTAGGGAGATGGCA 59.798 47.826 0.15 0.00 41.41 4.92
4514 6032 6.855763 AAGGTCATTTCCATTCTGCATTTA 57.144 33.333 0.00 0.00 0.00 1.40
4515 6033 5.750352 AAGGTCATTTCCATTCTGCATTT 57.250 34.783 0.00 0.00 0.00 2.32
4517 6035 6.608405 TCATAAAGGTCATTTCCATTCTGCAT 59.392 34.615 0.00 0.00 32.01 3.96
4518 6036 5.951148 TCATAAAGGTCATTTCCATTCTGCA 59.049 36.000 0.00 0.00 32.01 4.41
4519 6037 6.455360 TCATAAAGGTCATTTCCATTCTGC 57.545 37.500 0.00 0.00 32.01 4.26
4522 6040 8.055279 TGAGTTCATAAAGGTCATTTCCATTC 57.945 34.615 0.00 0.00 32.01 2.67
4531 6049 6.778821 TGGAGAAATGAGTTCATAAAGGTCA 58.221 36.000 0.00 0.00 38.86 4.02
4558 6076 4.782019 TGCCAAGTTGTAATTGCTAAGG 57.218 40.909 1.45 0.00 0.00 2.69
4607 6125 5.549742 TTCATTGTCCAGCTTCCATTTTT 57.450 34.783 0.00 0.00 0.00 1.94
4608 6126 5.511888 CCTTTCATTGTCCAGCTTCCATTTT 60.512 40.000 0.00 0.00 0.00 1.82
4609 6127 4.020839 CCTTTCATTGTCCAGCTTCCATTT 60.021 41.667 0.00 0.00 0.00 2.32
4610 6128 3.512724 CCTTTCATTGTCCAGCTTCCATT 59.487 43.478 0.00 0.00 0.00 3.16
4611 6129 3.094572 CCTTTCATTGTCCAGCTTCCAT 58.905 45.455 0.00 0.00 0.00 3.41
4612 6130 2.108075 TCCTTTCATTGTCCAGCTTCCA 59.892 45.455 0.00 0.00 0.00 3.53
4613 6131 2.751806 CTCCTTTCATTGTCCAGCTTCC 59.248 50.000 0.00 0.00 0.00 3.46
4614 6132 2.751806 CCTCCTTTCATTGTCCAGCTTC 59.248 50.000 0.00 0.00 0.00 3.86
4615 6133 2.800250 CCTCCTTTCATTGTCCAGCTT 58.200 47.619 0.00 0.00 0.00 3.74
4616 6134 1.615384 GCCTCCTTTCATTGTCCAGCT 60.615 52.381 0.00 0.00 0.00 4.24
4617 6135 0.813821 GCCTCCTTTCATTGTCCAGC 59.186 55.000 0.00 0.00 0.00 4.85
4618 6136 1.815003 GTGCCTCCTTTCATTGTCCAG 59.185 52.381 0.00 0.00 0.00 3.86
4619 6137 1.547675 GGTGCCTCCTTTCATTGTCCA 60.548 52.381 0.00 0.00 0.00 4.02
4620 6138 1.177401 GGTGCCTCCTTTCATTGTCC 58.823 55.000 0.00 0.00 0.00 4.02
4621 6139 2.206576 AGGTGCCTCCTTTCATTGTC 57.793 50.000 0.00 0.00 45.67 3.18
4631 6149 1.069978 GAGATGCTCTAAGGTGCCTCC 59.930 57.143 0.00 0.00 30.66 4.30
4632 6150 1.069978 GGAGATGCTCTAAGGTGCCTC 59.930 57.143 0.00 0.00 0.00 4.70
4633 6151 1.127343 GGAGATGCTCTAAGGTGCCT 58.873 55.000 0.00 0.00 0.00 4.75
4634 6152 0.833287 TGGAGATGCTCTAAGGTGCC 59.167 55.000 0.00 0.00 0.00 5.01
4635 6153 2.284190 GTTGGAGATGCTCTAAGGTGC 58.716 52.381 0.00 0.00 31.92 5.01
4636 6154 2.544685 CGTTGGAGATGCTCTAAGGTG 58.455 52.381 0.00 0.00 34.04 4.00
4738 6258 3.056938 AAATTTACCGCGGCCGCA 61.057 55.556 45.26 29.16 42.06 5.69
4818 6346 7.418840 TTTTGTGTCCAAAATGCAACATATC 57.581 32.000 0.00 0.00 43.72 1.63
4902 6440 8.325787 ACTTGTGGGTATGAACTTTATGTCATA 58.674 33.333 0.00 0.00 0.00 2.15
5006 6550 2.918131 GCTTGATTGTTGACGTGCCTTC 60.918 50.000 0.00 0.00 0.00 3.46
5014 6558 1.464997 GGACGAGGCTTGATTGTTGAC 59.535 52.381 9.20 0.00 0.00 3.18
5035 6579 2.697751 AGGAAGATGAGGATGAAGACGG 59.302 50.000 0.00 0.00 0.00 4.79
5069 6619 1.735386 AGAATCGTCTTCGGAGTCGA 58.265 50.000 15.30 15.30 44.93 4.20
5070 6620 2.546195 AAGAATCGTCTTCGGAGTCG 57.454 50.000 3.79 3.79 40.18 4.18
5101 6660 0.097499 CACATGACGATGCGCAATGT 59.903 50.000 17.11 16.93 32.14 2.71
5121 6695 1.172812 GCCAACACCTTCCGAGCTTT 61.173 55.000 0.00 0.00 0.00 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.