Multiple sequence alignment - TraesCS7B01G377700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G377700 chr7B 100.000 3889 0 0 1 3889 642268933 642272821 0.000000e+00 7182.0
1 TraesCS7B01G377700 chr7B 81.273 801 89 37 2099 2860 641680757 641681535 3.350000e-165 592.0
2 TraesCS7B01G377700 chr7B 95.000 200 6 2 1 200 677358346 677358541 1.050000e-80 311.0
3 TraesCS7B01G377700 chr7A 87.728 2135 151 45 1816 3889 670567145 670569229 0.000000e+00 2388.0
4 TraesCS7B01G377700 chr7A 89.408 642 48 9 3253 3889 670597571 670598197 0.000000e+00 791.0
5 TraesCS7B01G377700 chr7A 89.408 642 48 9 3253 3889 670751125 670751751 0.000000e+00 791.0
6 TraesCS7B01G377700 chr7A 80.859 815 87 41 2091 2877 670236976 670236203 9.370000e-161 577.0
7 TraesCS7B01G377700 chr7A 84.917 484 33 20 1003 1464 670566380 670566845 1.650000e-123 453.0
8 TraesCS7B01G377700 chr7A 89.252 214 8 5 453 660 670565681 670565885 1.790000e-63 254.0
9 TraesCS7B01G377700 chr7A 93.333 45 3 0 717 761 670566036 670566080 2.510000e-07 67.6
10 TraesCS7B01G377700 chr7D 89.350 1324 83 27 1685 2988 578484275 578485560 0.000000e+00 1611.0
11 TraesCS7B01G377700 chr7D 92.972 868 33 11 3045 3889 578485558 578486420 0.000000e+00 1240.0
12 TraesCS7B01G377700 chr7D 82.143 728 80 25 2133 2833 578136621 578137325 2.610000e-161 579.0
13 TraesCS7B01G377700 chr7D 89.474 190 10 4 958 1146 578483730 578483910 8.400000e-57 231.0
14 TraesCS7B01G377700 chr7D 87.736 106 6 3 241 345 578483180 578483279 2.460000e-22 117.0
15 TraesCS7B01G377700 chrUn 89.408 642 48 9 3253 3889 334657795 334658421 0.000000e+00 791.0
16 TraesCS7B01G377700 chrUn 89.392 641 49 9 3253 3889 316012047 316012672 0.000000e+00 789.0
17 TraesCS7B01G377700 chrUn 89.392 641 49 9 3253 3889 329293952 329293327 0.000000e+00 789.0
18 TraesCS7B01G377700 chr3D 80.282 568 61 29 1001 1557 21007209 21007736 7.880000e-102 381.0
19 TraesCS7B01G377700 chr3D 92.000 200 11 3 1 199 151608996 151609191 3.830000e-70 276.0
20 TraesCS7B01G377700 chr3D 86.813 91 11 1 3047 3136 45954089 45953999 2.470000e-17 100.0
21 TraesCS7B01G377700 chr4B 98.000 200 4 0 1 200 529835897 529835698 8.000000e-92 348.0
22 TraesCS7B01G377700 chr4B 77.714 525 71 26 2133 2632 669671615 669671112 2.960000e-71 279.0
23 TraesCS7B01G377700 chr2A 78.182 550 69 28 2133 2652 715827447 715826919 1.760000e-78 303.0
24 TraesCS7B01G377700 chr2A 92.611 203 9 4 1 201 82182859 82182661 1.770000e-73 287.0
25 TraesCS7B01G377700 chr4A 78.000 550 69 27 2133 2652 196783955 196784482 8.170000e-77 298.0
26 TraesCS7B01G377700 chr4A 91.667 204 12 3 1 200 639237368 639237166 1.060000e-70 278.0
27 TraesCS7B01G377700 chr4A 90.732 205 16 3 1 203 624660960 624660757 1.780000e-68 270.0
28 TraesCS7B01G377700 chr6A 77.818 550 71 28 2133 2652 576845360 576844832 3.800000e-75 292.0
29 TraesCS7B01G377700 chr6A 88.312 77 5 4 1655 1728 3604058 3603983 5.350000e-14 89.8
30 TraesCS7B01G377700 chr2D 91.626 203 13 4 1 200 151833506 151833707 1.060000e-70 278.0
31 TraesCS7B01G377700 chr1A 89.552 201 16 4 1 200 569422901 569423097 2.320000e-62 250.0
32 TraesCS7B01G377700 chr3B 86.598 194 18 7 8 199 681626249 681626062 1.420000e-49 207.0
33 TraesCS7B01G377700 chr3B 78.283 198 24 10 2939 3123 71553860 71553669 4.110000e-20 110.0
34 TraesCS7B01G377700 chr2B 81.000 200 19 9 1026 1225 726687871 726688051 1.460000e-29 141.0
35 TraesCS7B01G377700 chr2B 78.804 184 8 11 1042 1225 54044336 54044488 1.150000e-15 95.3
36 TraesCS7B01G377700 chr2B 84.946 93 4 5 1133 1225 54017056 54017138 6.920000e-13 86.1
37 TraesCS7B01G377700 chr5A 78.603 229 21 14 2451 2652 146516595 146516368 4.080000e-25 126.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G377700 chr7B 642268933 642272821 3888 False 7182.00 7182 100.0000 1 3889 1 chr7B.!!$F2 3888
1 TraesCS7B01G377700 chr7B 641680757 641681535 778 False 592.00 592 81.2730 2099 2860 1 chr7B.!!$F1 761
2 TraesCS7B01G377700 chr7A 670597571 670598197 626 False 791.00 791 89.4080 3253 3889 1 chr7A.!!$F1 636
3 TraesCS7B01G377700 chr7A 670751125 670751751 626 False 791.00 791 89.4080 3253 3889 1 chr7A.!!$F2 636
4 TraesCS7B01G377700 chr7A 670565681 670569229 3548 False 790.65 2388 88.8075 453 3889 4 chr7A.!!$F3 3436
5 TraesCS7B01G377700 chr7A 670236203 670236976 773 True 577.00 577 80.8590 2091 2877 1 chr7A.!!$R1 786
6 TraesCS7B01G377700 chr7D 578483180 578486420 3240 False 799.75 1611 89.8830 241 3889 4 chr7D.!!$F2 3648
7 TraesCS7B01G377700 chr7D 578136621 578137325 704 False 579.00 579 82.1430 2133 2833 1 chr7D.!!$F1 700
8 TraesCS7B01G377700 chrUn 334657795 334658421 626 False 791.00 791 89.4080 3253 3889 1 chrUn.!!$F2 636
9 TraesCS7B01G377700 chrUn 316012047 316012672 625 False 789.00 789 89.3920 3253 3889 1 chrUn.!!$F1 636
10 TraesCS7B01G377700 chrUn 329293327 329293952 625 True 789.00 789 89.3920 3253 3889 1 chrUn.!!$R1 636
11 TraesCS7B01G377700 chr3D 21007209 21007736 527 False 381.00 381 80.2820 1001 1557 1 chr3D.!!$F1 556
12 TraesCS7B01G377700 chr4B 669671112 669671615 503 True 279.00 279 77.7140 2133 2632 1 chr4B.!!$R2 499
13 TraesCS7B01G377700 chr2A 715826919 715827447 528 True 303.00 303 78.1820 2133 2652 1 chr2A.!!$R2 519
14 TraesCS7B01G377700 chr4A 196783955 196784482 527 False 298.00 298 78.0000 2133 2652 1 chr4A.!!$F1 519
15 TraesCS7B01G377700 chr6A 576844832 576845360 528 True 292.00 292 77.8180 2133 2652 1 chr6A.!!$R2 519

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
389 416 0.033503 TCCGAGTCACTCATGGCCTA 60.034 55.0 5.45 0.0 0.00 3.93 F
390 417 0.103208 CCGAGTCACTCATGGCCTAC 59.897 60.0 5.45 0.0 0.00 3.18 F
1653 2143 0.107312 CAGATCCTTCTGCACCCAGG 60.107 60.0 0.00 0.0 42.79 4.45 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1982 2527 0.104855 TGGTGATGATCTGGTAGCGC 59.895 55.000 0.0 0.0 0.0 5.92 R
2223 2772 1.606531 GGTCTGCCTCCTGATGCTT 59.393 57.895 0.0 0.0 0.0 3.91 R
3014 3671 1.004277 CCGTCTGTCTTGCGTGAGTC 61.004 60.000 0.0 0.0 0.0 3.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 3.753434 AGCCGACGAGCTCCAGTG 61.753 66.667 8.47 0.00 39.48 3.66
31 32 4.057428 GCCGACGAGCTCCAGTGT 62.057 66.667 8.47 0.00 0.00 3.55
32 33 2.651361 CCGACGAGCTCCAGTGTT 59.349 61.111 8.47 0.00 0.00 3.32
33 34 1.444553 CCGACGAGCTCCAGTGTTC 60.445 63.158 8.47 0.00 0.00 3.18
34 35 1.797933 CGACGAGCTCCAGTGTTCG 60.798 63.158 8.47 3.36 44.22 3.95
35 36 1.579932 GACGAGCTCCAGTGTTCGA 59.420 57.895 8.47 0.00 41.92 3.71
36 37 0.171455 GACGAGCTCCAGTGTTCGAT 59.829 55.000 8.47 0.00 41.92 3.59
37 38 0.109086 ACGAGCTCCAGTGTTCGATG 60.109 55.000 8.47 0.00 41.92 3.84
38 39 0.803768 CGAGCTCCAGTGTTCGATGG 60.804 60.000 8.47 0.00 41.92 3.51
39 40 1.078848 AGCTCCAGTGTTCGATGGC 60.079 57.895 0.00 0.00 36.47 4.40
40 41 2.109126 GCTCCAGTGTTCGATGGCC 61.109 63.158 0.00 0.00 36.47 5.36
41 42 1.599047 CTCCAGTGTTCGATGGCCT 59.401 57.895 3.32 0.00 36.47 5.19
42 43 0.460987 CTCCAGTGTTCGATGGCCTC 60.461 60.000 3.32 0.00 36.47 4.70
43 44 1.191489 TCCAGTGTTCGATGGCCTCA 61.191 55.000 3.32 0.00 36.47 3.86
44 45 0.321564 CCAGTGTTCGATGGCCTCAA 60.322 55.000 3.32 0.00 0.00 3.02
45 46 0.798776 CAGTGTTCGATGGCCTCAAC 59.201 55.000 3.32 1.93 0.00 3.18
46 47 0.687354 AGTGTTCGATGGCCTCAACT 59.313 50.000 3.32 0.00 0.00 3.16
47 48 1.079503 GTGTTCGATGGCCTCAACTC 58.920 55.000 3.32 0.00 0.00 3.01
48 49 0.684535 TGTTCGATGGCCTCAACTCA 59.315 50.000 3.32 0.00 0.00 3.41
49 50 1.338105 TGTTCGATGGCCTCAACTCAG 60.338 52.381 3.32 0.00 0.00 3.35
50 51 0.250234 TTCGATGGCCTCAACTCAGG 59.750 55.000 3.32 0.00 36.50 3.86
56 57 2.045536 CCTCAACTCAGGCCCAGC 60.046 66.667 0.00 0.00 0.00 4.85
57 58 2.600729 CCTCAACTCAGGCCCAGCT 61.601 63.158 0.00 0.00 0.00 4.24
58 59 1.078567 CTCAACTCAGGCCCAGCTC 60.079 63.158 0.00 0.00 0.00 4.09
59 60 2.045536 CAACTCAGGCCCAGCTCC 60.046 66.667 0.00 0.00 0.00 4.70
60 61 2.530151 AACTCAGGCCCAGCTCCA 60.530 61.111 0.00 0.00 0.00 3.86
61 62 2.156098 AACTCAGGCCCAGCTCCAA 61.156 57.895 0.00 0.00 0.00 3.53
62 63 2.045536 CTCAGGCCCAGCTCCAAC 60.046 66.667 0.00 0.00 0.00 3.77
63 64 3.965539 CTCAGGCCCAGCTCCAACG 62.966 68.421 0.00 0.00 0.00 4.10
67 68 4.096003 GCCCAGCTCCAACGCCTA 62.096 66.667 0.00 0.00 0.00 3.93
68 69 2.187946 CCCAGCTCCAACGCCTAG 59.812 66.667 0.00 0.00 0.00 3.02
69 70 2.512515 CCAGCTCCAACGCCTAGC 60.513 66.667 0.00 0.00 36.48 3.42
81 82 4.286320 CCTAGCGGCCTAGTGCGG 62.286 72.222 0.00 6.45 42.61 5.69
89 90 4.463879 CCTAGTGCGGCAGCTGCT 62.464 66.667 35.82 19.83 45.42 4.24
90 91 2.496341 CTAGTGCGGCAGCTGCTA 59.504 61.111 35.82 19.89 45.42 3.49
91 92 1.880340 CTAGTGCGGCAGCTGCTAC 60.880 63.158 35.82 28.96 45.42 3.58
92 93 3.699955 TAGTGCGGCAGCTGCTACG 62.700 63.158 35.82 30.81 45.42 3.51
96 97 3.197790 CGGCAGCTGCTACGCATT 61.198 61.111 35.82 0.00 38.13 3.56
97 98 2.753966 CGGCAGCTGCTACGCATTT 61.754 57.895 35.82 0.00 38.13 2.32
98 99 1.508088 GGCAGCTGCTACGCATTTT 59.492 52.632 35.82 0.00 38.13 1.82
99 100 0.109132 GGCAGCTGCTACGCATTTTT 60.109 50.000 35.82 0.00 38.13 1.94
100 101 1.262882 GCAGCTGCTACGCATTTTTC 58.737 50.000 31.33 0.00 38.13 2.29
101 102 1.135575 GCAGCTGCTACGCATTTTTCT 60.136 47.619 31.33 0.00 38.13 2.52
102 103 2.669391 GCAGCTGCTACGCATTTTTCTT 60.669 45.455 31.33 0.00 38.13 2.52
103 104 3.568538 CAGCTGCTACGCATTTTTCTTT 58.431 40.909 0.00 0.00 38.13 2.52
104 105 3.983344 CAGCTGCTACGCATTTTTCTTTT 59.017 39.130 0.00 0.00 38.13 2.27
105 106 4.089065 CAGCTGCTACGCATTTTTCTTTTC 59.911 41.667 0.00 0.00 38.13 2.29
106 107 3.980775 GCTGCTACGCATTTTTCTTTTCA 59.019 39.130 0.00 0.00 38.13 2.69
107 108 4.444056 GCTGCTACGCATTTTTCTTTTCAA 59.556 37.500 0.00 0.00 38.13 2.69
108 109 5.051106 GCTGCTACGCATTTTTCTTTTCAAA 60.051 36.000 0.00 0.00 38.13 2.69
109 110 6.509358 GCTGCTACGCATTTTTCTTTTCAAAA 60.509 34.615 0.00 0.00 38.13 2.44
110 111 7.295952 TGCTACGCATTTTTCTTTTCAAAAA 57.704 28.000 0.00 0.00 39.09 1.94
111 112 7.914465 TGCTACGCATTTTTCTTTTCAAAAAT 58.086 26.923 0.00 0.00 43.63 1.82
112 113 9.035607 TGCTACGCATTTTTCTTTTCAAAAATA 57.964 25.926 4.10 0.00 41.82 1.40
113 114 9.301606 GCTACGCATTTTTCTTTTCAAAAATAC 57.698 29.630 4.10 0.00 41.82 1.89
118 119 9.811655 GCATTTTTCTTTTCAAAAATACTAGGC 57.188 29.630 4.10 1.09 41.82 3.93
137 138 7.168905 ACTAGGCCTATATAAGAAACATTGGC 58.831 38.462 14.30 0.00 39.09 4.52
139 140 5.644977 GCCTATATAAGAAACATTGGCCC 57.355 43.478 0.00 0.00 35.40 5.80
140 141 4.462834 GCCTATATAAGAAACATTGGCCCC 59.537 45.833 0.00 0.00 35.40 5.80
141 142 5.016831 CCTATATAAGAAACATTGGCCCCC 58.983 45.833 0.00 0.00 0.00 5.40
162 163 3.541996 CCAAAATTATGGGCCCTGTTC 57.458 47.619 25.70 0.00 36.79 3.18
163 164 2.159114 CCAAAATTATGGGCCCTGTTCG 60.159 50.000 25.70 3.65 36.79 3.95
164 165 1.775385 AAATTATGGGCCCTGTTCGG 58.225 50.000 25.70 0.00 0.00 4.30
174 175 3.055719 CTGTTCGGGCCGCACATT 61.056 61.111 30.28 0.00 32.35 2.71
175 176 2.596046 TGTTCGGGCCGCACATTT 60.596 55.556 27.04 0.00 27.22 2.32
176 177 2.126502 GTTCGGGCCGCACATTTG 60.127 61.111 23.61 0.00 0.00 2.32
177 178 3.369400 TTCGGGCCGCACATTTGG 61.369 61.111 23.83 0.00 0.00 3.28
178 179 4.652131 TCGGGCCGCACATTTGGT 62.652 61.111 23.83 0.00 0.00 3.67
179 180 2.748251 CGGGCCGCACATTTGGTA 60.748 61.111 15.42 0.00 0.00 3.25
180 181 2.882132 GGGCCGCACATTTGGTAC 59.118 61.111 0.00 0.00 0.00 3.34
181 182 2.706834 GGGCCGCACATTTGGTACC 61.707 63.158 4.43 4.43 0.00 3.34
182 183 1.974343 GGCCGCACATTTGGTACCA 60.974 57.895 11.60 11.60 0.00 3.25
183 184 1.211709 GCCGCACATTTGGTACCAC 59.788 57.895 16.04 0.27 0.00 4.16
184 185 1.241315 GCCGCACATTTGGTACCACT 61.241 55.000 16.04 1.57 0.00 4.00
185 186 1.946747 GCCGCACATTTGGTACCACTA 60.947 52.381 16.04 6.19 0.00 2.74
186 187 2.639065 CCGCACATTTGGTACCACTAT 58.361 47.619 16.04 8.54 0.00 2.12
187 188 2.354510 CCGCACATTTGGTACCACTATG 59.645 50.000 24.69 24.69 0.00 2.23
188 189 2.354510 CGCACATTTGGTACCACTATGG 59.645 50.000 27.59 20.57 45.02 2.74
189 190 2.687935 GCACATTTGGTACCACTATGGG 59.312 50.000 27.59 26.18 43.37 4.00
190 191 2.687935 CACATTTGGTACCACTATGGGC 59.312 50.000 27.59 0.00 43.37 5.36
191 192 2.306847 CATTTGGTACCACTATGGGCC 58.693 52.381 16.04 0.00 43.37 5.80
192 193 0.626916 TTTGGTACCACTATGGGCCC 59.373 55.000 17.59 17.59 43.37 5.80
193 194 1.628238 TTGGTACCACTATGGGCCCG 61.628 60.000 19.37 5.25 43.37 6.13
194 195 2.814835 GGTACCACTATGGGCCCGG 61.815 68.421 19.37 14.67 43.37 5.73
195 196 3.165685 TACCACTATGGGCCCGGC 61.166 66.667 19.37 0.00 43.37 6.13
211 212 2.188994 GCCCTGCCAGCTGAGTAG 59.811 66.667 17.39 13.71 0.00 2.57
212 213 2.362369 GCCCTGCCAGCTGAGTAGA 61.362 63.158 17.39 0.00 0.00 2.59
213 214 1.821936 CCCTGCCAGCTGAGTAGAG 59.178 63.158 17.39 1.22 0.00 2.43
214 215 0.975040 CCCTGCCAGCTGAGTAGAGT 60.975 60.000 17.39 0.00 0.00 3.24
215 216 1.686428 CCCTGCCAGCTGAGTAGAGTA 60.686 57.143 17.39 0.00 0.00 2.59
216 217 1.680735 CCTGCCAGCTGAGTAGAGTAG 59.319 57.143 17.39 5.90 0.00 2.57
217 218 1.680735 CTGCCAGCTGAGTAGAGTAGG 59.319 57.143 17.39 0.00 0.00 3.18
218 219 1.006043 TGCCAGCTGAGTAGAGTAGGT 59.994 52.381 17.39 0.00 0.00 3.08
219 220 1.407258 GCCAGCTGAGTAGAGTAGGTG 59.593 57.143 17.39 0.00 39.09 4.00
220 221 2.946341 GCCAGCTGAGTAGAGTAGGTGA 60.946 54.545 17.39 0.00 41.17 4.02
221 222 3.561143 CCAGCTGAGTAGAGTAGGTGAT 58.439 50.000 17.39 0.00 41.17 3.06
222 223 3.317711 CCAGCTGAGTAGAGTAGGTGATG 59.682 52.174 17.39 0.00 41.17 3.07
223 224 2.955660 AGCTGAGTAGAGTAGGTGATGC 59.044 50.000 0.00 0.00 0.00 3.91
224 225 2.690497 GCTGAGTAGAGTAGGTGATGCA 59.310 50.000 0.00 0.00 0.00 3.96
225 226 3.243367 GCTGAGTAGAGTAGGTGATGCAG 60.243 52.174 0.00 0.00 0.00 4.41
226 227 4.203226 CTGAGTAGAGTAGGTGATGCAGA 58.797 47.826 0.00 0.00 0.00 4.26
227 228 4.600062 TGAGTAGAGTAGGTGATGCAGAA 58.400 43.478 0.00 0.00 0.00 3.02
228 229 4.642437 TGAGTAGAGTAGGTGATGCAGAAG 59.358 45.833 0.00 0.00 0.00 2.85
229 230 4.861196 AGTAGAGTAGGTGATGCAGAAGA 58.139 43.478 0.00 0.00 0.00 2.87
230 231 4.887071 AGTAGAGTAGGTGATGCAGAAGAG 59.113 45.833 0.00 0.00 0.00 2.85
231 232 3.974719 AGAGTAGGTGATGCAGAAGAGA 58.025 45.455 0.00 0.00 0.00 3.10
232 233 3.699038 AGAGTAGGTGATGCAGAAGAGAC 59.301 47.826 0.00 0.00 0.00 3.36
233 234 2.425312 AGTAGGTGATGCAGAAGAGACG 59.575 50.000 0.00 0.00 0.00 4.18
234 235 0.108424 AGGTGATGCAGAAGAGACGC 60.108 55.000 0.00 0.00 0.00 5.19
235 236 0.108424 GGTGATGCAGAAGAGACGCT 60.108 55.000 0.00 0.00 0.00 5.07
236 237 1.674221 GGTGATGCAGAAGAGACGCTT 60.674 52.381 0.00 0.00 40.25 4.68
237 238 2.417379 GGTGATGCAGAAGAGACGCTTA 60.417 50.000 0.00 0.00 36.83 3.09
238 239 3.254060 GTGATGCAGAAGAGACGCTTAA 58.746 45.455 0.00 0.00 36.83 1.85
239 240 3.868077 GTGATGCAGAAGAGACGCTTAAT 59.132 43.478 0.00 0.00 36.83 1.40
259 260 1.250328 TTGCATGGTTGAGGCAAGAG 58.750 50.000 0.00 0.00 46.12 2.85
266 267 1.736645 TTGAGGCAAGAGCGCGTAC 60.737 57.895 8.43 1.75 43.41 3.67
270 271 1.139095 GGCAAGAGCGCGTACTACT 59.861 57.895 8.43 0.00 43.41 2.57
271 272 0.379669 GGCAAGAGCGCGTACTACTA 59.620 55.000 8.43 0.00 43.41 1.82
272 273 1.464821 GCAAGAGCGCGTACTACTAC 58.535 55.000 8.43 0.00 0.00 2.73
273 274 1.063764 GCAAGAGCGCGTACTACTACT 59.936 52.381 8.43 0.00 0.00 2.57
274 275 2.286294 GCAAGAGCGCGTACTACTACTA 59.714 50.000 8.43 0.00 0.00 1.82
275 276 3.844226 GCAAGAGCGCGTACTACTACTAC 60.844 52.174 8.43 0.00 0.00 2.73
276 277 2.478831 AGAGCGCGTACTACTACTACC 58.521 52.381 8.43 0.00 0.00 3.18
277 278 2.102252 AGAGCGCGTACTACTACTACCT 59.898 50.000 8.43 0.00 0.00 3.08
278 279 3.319405 AGAGCGCGTACTACTACTACCTA 59.681 47.826 8.43 0.00 0.00 3.08
284 285 5.631512 CGCGTACTACTACTACCTAACCTAG 59.368 48.000 0.00 0.00 0.00 3.02
317 318 1.293498 CGGTGTGTCCTCTTCCTGG 59.707 63.158 0.00 0.00 0.00 4.45
322 323 3.967987 GGTGTGTCCTCTTCCTGGTATAT 59.032 47.826 0.00 0.00 0.00 0.86
345 347 2.360600 CGGGTTCCATTTCCGGCA 60.361 61.111 0.00 0.00 40.07 5.69
348 350 1.595093 GGGTTCCATTTCCGGCACAG 61.595 60.000 0.00 0.00 0.00 3.66
378 405 3.995219 CTGCATGCGCTCCGAGTCA 62.995 63.158 14.09 0.00 39.64 3.41
379 406 3.558411 GCATGCGCTCCGAGTCAC 61.558 66.667 9.73 0.00 34.30 3.67
380 407 2.182791 CATGCGCTCCGAGTCACT 59.817 61.111 9.73 0.00 0.00 3.41
381 408 1.875813 CATGCGCTCCGAGTCACTC 60.876 63.158 9.73 0.00 0.00 3.51
383 410 1.670949 ATGCGCTCCGAGTCACTCAT 61.671 55.000 9.73 0.00 0.00 2.90
384 411 1.875813 GCGCTCCGAGTCACTCATG 60.876 63.158 5.45 0.00 0.00 3.07
385 412 1.226802 CGCTCCGAGTCACTCATGG 60.227 63.158 5.45 0.00 0.00 3.66
386 413 1.520342 GCTCCGAGTCACTCATGGC 60.520 63.158 5.45 1.41 0.00 4.40
387 414 1.142748 CTCCGAGTCACTCATGGCC 59.857 63.158 5.45 0.00 0.00 5.36
388 415 1.305297 TCCGAGTCACTCATGGCCT 60.305 57.895 5.45 0.00 0.00 5.19
389 416 0.033503 TCCGAGTCACTCATGGCCTA 60.034 55.000 5.45 0.00 0.00 3.93
390 417 0.103208 CCGAGTCACTCATGGCCTAC 59.897 60.000 5.45 0.00 0.00 3.18
391 418 0.817654 CGAGTCACTCATGGCCTACA 59.182 55.000 5.45 0.00 0.00 2.74
392 419 1.410517 CGAGTCACTCATGGCCTACAT 59.589 52.381 5.45 0.00 41.57 2.29
393 420 2.544694 CGAGTCACTCATGGCCTACATC 60.545 54.545 5.45 0.00 37.84 3.06
394 421 1.765314 AGTCACTCATGGCCTACATCC 59.235 52.381 3.32 0.00 37.84 3.51
395 422 1.486310 GTCACTCATGGCCTACATCCA 59.514 52.381 3.32 0.00 37.84 3.41
396 423 2.105477 GTCACTCATGGCCTACATCCAT 59.895 50.000 3.32 0.00 44.70 3.41
400 427 1.462035 ATGGCCTACATCCATGCCC 59.538 57.895 3.32 0.00 42.39 5.36
401 428 2.281761 GGCCTACATCCATGCCCG 60.282 66.667 0.00 0.00 37.94 6.13
402 429 2.281761 GCCTACATCCATGCCCGG 60.282 66.667 0.00 0.00 0.00 5.73
412 439 2.180204 CATGCCCGGGTCATTCGTC 61.180 63.158 24.63 2.41 0.00 4.20
414 441 4.090588 GCCCGGGTCATTCGTCCA 62.091 66.667 24.63 0.00 0.00 4.02
424 451 3.187700 GTCATTCGTCCAAAGCTACGAT 58.812 45.455 10.06 0.00 46.44 3.73
619 768 3.062466 GAGGGCCGCCTTTGTTCC 61.062 66.667 9.86 0.00 0.00 3.62
623 772 4.103103 GCCGCCTTTGTTCCGCTC 62.103 66.667 0.00 0.00 0.00 5.03
624 773 3.431725 CCGCCTTTGTTCCGCTCC 61.432 66.667 0.00 0.00 0.00 4.70
625 774 2.668212 CGCCTTTGTTCCGCTCCA 60.668 61.111 0.00 0.00 0.00 3.86
626 775 2.954611 GCCTTTGTTCCGCTCCAC 59.045 61.111 0.00 0.00 0.00 4.02
627 776 2.966309 GCCTTTGTTCCGCTCCACG 61.966 63.158 0.00 0.00 43.15 4.94
661 810 3.991051 CGGTCGGTCACAGCACCT 61.991 66.667 0.00 0.00 33.77 4.00
664 813 1.069090 GTCGGTCACAGCACCTCAA 59.931 57.895 0.00 0.00 33.77 3.02
665 814 0.946221 GTCGGTCACAGCACCTCAAG 60.946 60.000 0.00 0.00 33.77 3.02
672 862 4.326507 AGCACCTCAAGCGCTGCT 62.327 61.111 12.58 12.95 42.56 4.24
700 930 4.738998 TTGGTGCCGCATGGGAGG 62.739 66.667 12.02 0.00 35.57 4.30
705 935 3.474570 GCCGCATGGGAGGAGAGT 61.475 66.667 12.02 0.00 38.47 3.24
706 936 2.818132 CCGCATGGGAGGAGAGTC 59.182 66.667 12.02 0.00 38.47 3.36
724 967 1.547372 GTCGTCAAAGCTACCCCACTA 59.453 52.381 0.00 0.00 0.00 2.74
726 969 1.274167 CGTCAAAGCTACCCCACTACA 59.726 52.381 0.00 0.00 0.00 2.74
731 974 3.469750 AAGCTACCCCACTACAGTAGT 57.530 47.619 7.48 7.48 40.28 2.73
760 1003 3.443045 CTTCCCGGCAATTGCGCT 61.443 61.111 23.48 0.00 43.26 5.92
761 1004 2.988684 TTCCCGGCAATTGCGCTT 60.989 55.556 23.48 0.00 43.26 4.68
762 1005 3.279974 TTCCCGGCAATTGCGCTTG 62.280 57.895 23.48 12.95 43.26 4.01
763 1006 3.746889 CCCGGCAATTGCGCTTGA 61.747 61.111 23.48 0.00 43.26 3.02
764 1007 2.202518 CCGGCAATTGCGCTTGAG 60.203 61.111 23.48 10.25 43.26 3.02
765 1008 2.202518 CGGCAATTGCGCTTGAGG 60.203 61.111 23.48 3.59 43.26 3.86
766 1009 2.964978 GGCAATTGCGCTTGAGGT 59.035 55.556 23.48 0.00 43.26 3.85
767 1010 1.444895 GGCAATTGCGCTTGAGGTG 60.445 57.895 23.48 0.00 43.26 4.00
773 1016 3.435186 GCGCTTGAGGTGCTTCCC 61.435 66.667 0.00 0.00 46.82 3.97
774 1017 3.121030 CGCTTGAGGTGCTTCCCG 61.121 66.667 0.00 0.00 36.75 5.14
775 1018 2.747855 GCTTGAGGTGCTTCCCGG 60.748 66.667 0.00 0.00 36.75 5.73
776 1019 2.747855 CTTGAGGTGCTTCCCGGC 60.748 66.667 0.00 0.00 36.75 6.13
777 1020 3.551496 CTTGAGGTGCTTCCCGGCA 62.551 63.158 0.00 0.00 40.15 5.69
778 1021 3.126703 TTGAGGTGCTTCCCGGCAA 62.127 57.895 0.00 0.00 44.18 4.52
779 1022 2.044946 GAGGTGCTTCCCGGCAAT 60.045 61.111 0.00 0.00 44.18 3.56
785 1028 3.443045 CTTCCCGGCAATTGCGCT 61.443 61.111 23.48 0.00 43.26 5.92
786 1029 3.688475 CTTCCCGGCAATTGCGCTG 62.688 63.158 23.48 15.32 43.26 5.18
789 1032 4.501714 CCGGCAATTGCGCTGCAT 62.502 61.111 23.48 2.15 41.78 3.96
791 1034 3.560278 GGCAATTGCGCTGCATGC 61.560 61.111 23.48 11.82 41.88 4.06
793 1036 3.251763 CAATTGCGCTGCATGCCG 61.252 61.111 16.68 13.70 38.76 5.69
833 1076 3.362262 CGGACTCTCACCGGAACA 58.638 61.111 9.46 0.00 45.65 3.18
834 1077 1.213013 CGGACTCTCACCGGAACAG 59.787 63.158 9.46 0.00 45.65 3.16
838 1081 2.096248 GACTCTCACCGGAACAGAGAT 58.904 52.381 25.83 15.10 37.73 2.75
844 1087 1.683917 CACCGGAACAGAGATAGAGGG 59.316 57.143 9.46 0.00 0.00 4.30
850 1093 2.687003 ACAGAGATAGAGGGGCTACC 57.313 55.000 0.00 0.00 40.67 3.18
866 1109 2.896044 GCTACCTACCACTACCATACCC 59.104 54.545 0.00 0.00 0.00 3.69
868 1111 2.755686 ACCTACCACTACCATACCCAC 58.244 52.381 0.00 0.00 0.00 4.61
881 1124 1.349542 TACCCACACACCTTGGTGCT 61.350 55.000 18.67 4.65 42.55 4.40
882 1125 1.898574 CCCACACACCTTGGTGCTC 60.899 63.158 18.67 0.00 42.55 4.26
883 1126 1.898574 CCACACACCTTGGTGCTCC 60.899 63.158 18.67 0.00 42.55 4.70
884 1127 1.152984 CACACACCTTGGTGCTCCA 60.153 57.895 18.67 2.64 42.55 3.86
885 1128 1.152963 ACACACCTTGGTGCTCCAC 60.153 57.895 18.67 0.00 44.22 4.02
886 1129 1.149174 CACACCTTGGTGCTCCACT 59.851 57.895 18.67 0.00 44.22 4.00
887 1130 0.886490 CACACCTTGGTGCTCCACTC 60.886 60.000 18.67 0.00 44.22 3.51
888 1131 1.344953 ACACCTTGGTGCTCCACTCA 61.345 55.000 18.67 0.00 44.22 3.41
889 1132 0.886490 CACCTTGGTGCTCCACTCAC 60.886 60.000 7.09 0.00 44.22 3.51
893 1136 4.008933 GGTGCTCCACTCACCGCT 62.009 66.667 0.00 0.00 43.75 5.52
894 1137 2.740055 GTGCTCCACTCACCGCTG 60.740 66.667 0.00 0.00 0.00 5.18
895 1138 3.233980 TGCTCCACTCACCGCTGT 61.234 61.111 0.00 0.00 0.00 4.40
896 1139 2.740055 GCTCCACTCACCGCTGTG 60.740 66.667 1.20 1.20 44.18 3.66
897 1140 2.740055 CTCCACTCACCGCTGTGC 60.740 66.667 2.98 0.00 42.46 4.57
898 1141 3.231889 CTCCACTCACCGCTGTGCT 62.232 63.158 2.98 0.00 42.46 4.40
899 1142 3.046087 CCACTCACCGCTGTGCTG 61.046 66.667 2.98 1.56 42.46 4.41
900 1143 2.280389 CACTCACCGCTGTGCTGT 60.280 61.111 2.98 2.48 42.46 4.40
901 1144 2.280389 ACTCACCGCTGTGCTGTG 60.280 61.111 2.98 7.59 43.31 3.66
902 1145 3.720193 CTCACCGCTGTGCTGTGC 61.720 66.667 2.98 0.00 42.07 4.57
956 1356 0.795085 CTCTGCCGCTTGTTTCAGAG 59.205 55.000 4.05 4.05 44.18 3.35
959 1405 0.465460 TGCCGCTTGTTTCAGAGGTT 60.465 50.000 0.00 0.00 36.17 3.50
962 1408 1.069906 CCGCTTGTTTCAGAGGTTTCG 60.070 52.381 0.00 0.00 0.00 3.46
989 1435 2.045926 CCGCTCCAAGGTTCCAGG 60.046 66.667 0.00 0.00 0.00 4.45
990 1436 2.747855 CGCTCCAAGGTTCCAGGC 60.748 66.667 0.00 0.00 0.00 4.85
996 1442 0.674895 CCAAGGTTCCAGGCGAAGAG 60.675 60.000 0.00 0.00 0.00 2.85
997 1443 0.674895 CAAGGTTCCAGGCGAAGAGG 60.675 60.000 0.00 0.00 0.00 3.69
1028 1474 4.873129 CGGGATGGCTGACGACGG 62.873 72.222 0.00 0.00 0.00 4.79
1185 1631 4.394712 CACACCAGGTCCGCCTCC 62.395 72.222 0.00 0.00 44.97 4.30
1240 1686 1.651987 TCTCGATTCATTCCGGTTGC 58.348 50.000 0.00 0.00 0.00 4.17
1258 1710 2.135139 TGCGCACTGATTTCGGATATC 58.865 47.619 5.66 0.00 0.00 1.63
1262 1714 3.733337 GCACTGATTTCGGATATCCTGT 58.267 45.455 19.61 2.72 0.00 4.00
1263 1715 3.743396 GCACTGATTTCGGATATCCTGTC 59.257 47.826 19.61 11.67 0.00 3.51
1264 1716 4.740634 GCACTGATTTCGGATATCCTGTCA 60.741 45.833 19.61 15.03 0.00 3.58
1265 1717 4.747108 CACTGATTTCGGATATCCTGTCAC 59.253 45.833 19.61 8.75 0.00 3.67
1266 1718 3.977427 TGATTTCGGATATCCTGTCACG 58.023 45.455 19.61 5.40 0.00 4.35
1267 1719 3.383505 TGATTTCGGATATCCTGTCACGT 59.616 43.478 19.61 0.00 0.00 4.49
1268 1720 4.581409 TGATTTCGGATATCCTGTCACGTA 59.419 41.667 19.61 0.00 0.00 3.57
1269 1721 3.976793 TTCGGATATCCTGTCACGTAC 57.023 47.619 19.61 0.00 0.00 3.67
1287 1739 4.882447 CGTACTCACGTCCATTTTCAATC 58.118 43.478 0.00 0.00 43.31 2.67
1314 1802 2.821969 CTGCAATGCCCTGTTTACTTCT 59.178 45.455 1.53 0.00 0.00 2.85
1316 1804 2.159517 GCAATGCCCTGTTTACTTCTCG 60.160 50.000 0.00 0.00 0.00 4.04
1317 1805 3.334691 CAATGCCCTGTTTACTTCTCGA 58.665 45.455 0.00 0.00 0.00 4.04
1318 1806 3.914426 ATGCCCTGTTTACTTCTCGAT 57.086 42.857 0.00 0.00 0.00 3.59
1319 1807 3.695830 TGCCCTGTTTACTTCTCGATT 57.304 42.857 0.00 0.00 0.00 3.34
1320 1808 4.811969 TGCCCTGTTTACTTCTCGATTA 57.188 40.909 0.00 0.00 0.00 1.75
1321 1809 4.755411 TGCCCTGTTTACTTCTCGATTAG 58.245 43.478 0.00 0.00 0.00 1.73
1322 1810 4.222145 TGCCCTGTTTACTTCTCGATTAGT 59.778 41.667 5.12 5.12 0.00 2.24
1323 1811 5.419788 TGCCCTGTTTACTTCTCGATTAGTA 59.580 40.000 3.42 3.42 0.00 1.82
1324 1812 5.747675 GCCCTGTTTACTTCTCGATTAGTAC 59.252 44.000 6.35 0.00 0.00 2.73
1325 1813 6.405619 GCCCTGTTTACTTCTCGATTAGTACT 60.406 42.308 0.00 0.00 0.00 2.73
1326 1814 7.194962 CCCTGTTTACTTCTCGATTAGTACTC 58.805 42.308 0.00 4.51 0.00 2.59
1327 1815 6.906143 CCTGTTTACTTCTCGATTAGTACTCG 59.094 42.308 0.00 3.65 37.47 4.18
1328 1816 7.369803 TGTTTACTTCTCGATTAGTACTCGT 57.630 36.000 0.00 0.00 37.40 4.18
1360 1848 0.179094 GTGTGTGGTGACTCGTTCCA 60.179 55.000 0.00 0.00 0.00 3.53
1397 1885 7.275888 TCTGCACTATGTTTTGATGAACTTT 57.724 32.000 0.00 0.00 0.00 2.66
1414 1902 9.994432 GATGAACTTTACCAATTACTGAATCTG 57.006 33.333 0.00 0.00 0.00 2.90
1464 1952 2.230025 CCGTGCCCAATTGATTTGTGTA 59.770 45.455 7.12 0.00 33.15 2.90
1466 1954 3.057596 CGTGCCCAATTGATTTGTGTAGT 60.058 43.478 7.12 0.00 33.15 2.73
1469 1957 4.157656 TGCCCAATTGATTTGTGTAGTAGC 59.842 41.667 7.12 0.00 33.15 3.58
1470 1958 4.157656 GCCCAATTGATTTGTGTAGTAGCA 59.842 41.667 7.12 0.00 33.15 3.49
1473 1961 6.319658 CCCAATTGATTTGTGTAGTAGCAGAT 59.680 38.462 7.12 0.00 33.15 2.90
1474 1962 7.148018 CCCAATTGATTTGTGTAGTAGCAGATT 60.148 37.037 7.12 0.00 33.15 2.40
1475 1963 8.892723 CCAATTGATTTGTGTAGTAGCAGATTA 58.107 33.333 7.12 0.00 33.15 1.75
1478 1966 9.890629 ATTGATTTGTGTAGTAGCAGATTAAGA 57.109 29.630 0.00 0.00 0.00 2.10
1480 1968 9.151471 TGATTTGTGTAGTAGCAGATTAAGAAC 57.849 33.333 0.00 0.00 0.00 3.01
1484 1972 7.620880 TGTGTAGTAGCAGATTAAGAACCAAT 58.379 34.615 0.00 0.00 0.00 3.16
1485 1973 8.100791 TGTGTAGTAGCAGATTAAGAACCAATT 58.899 33.333 0.00 0.00 0.00 2.32
1486 1974 8.947115 GTGTAGTAGCAGATTAAGAACCAATTT 58.053 33.333 0.00 0.00 0.00 1.82
1520 2008 5.755813 CCATCGTACGTAGCTACAGTATTT 58.244 41.667 23.21 11.44 0.00 1.40
1530 2018 5.365021 AGCTACAGTATTTGGATGCTCTT 57.635 39.130 0.00 0.00 0.00 2.85
1535 2023 4.752101 ACAGTATTTGGATGCTCTTATCGC 59.248 41.667 0.00 0.00 0.00 4.58
1536 2024 4.993584 CAGTATTTGGATGCTCTTATCGCT 59.006 41.667 0.00 0.00 0.00 4.93
1544 2032 2.346803 TGCTCTTATCGCTTGTTCCAC 58.653 47.619 0.00 0.00 0.00 4.02
1551 2039 0.602638 TCGCTTGTTCCACGCTCAAT 60.603 50.000 0.00 0.00 0.00 2.57
1553 2041 1.463056 CGCTTGTTCCACGCTCAATTA 59.537 47.619 0.00 0.00 0.00 1.40
1554 2042 2.474526 CGCTTGTTCCACGCTCAATTAG 60.475 50.000 0.00 0.00 0.00 1.73
1555 2043 2.484264 GCTTGTTCCACGCTCAATTAGT 59.516 45.455 0.00 0.00 0.00 2.24
1556 2044 3.424962 GCTTGTTCCACGCTCAATTAGTC 60.425 47.826 0.00 0.00 0.00 2.59
1557 2045 3.678056 TGTTCCACGCTCAATTAGTCT 57.322 42.857 0.00 0.00 0.00 3.24
1558 2046 4.002906 TGTTCCACGCTCAATTAGTCTT 57.997 40.909 0.00 0.00 0.00 3.01
1559 2047 5.142061 TGTTCCACGCTCAATTAGTCTTA 57.858 39.130 0.00 0.00 0.00 2.10
1570 2060 9.363763 CGCTCAATTAGTCTTATGATGATATGT 57.636 33.333 0.00 0.00 0.00 2.29
1601 2091 4.783764 TTAGCTCTGAGTTCAATCGTGA 57.216 40.909 6.53 0.00 0.00 4.35
1626 2116 6.044054 AGGCATCTTCAGATTAGGATTCATGA 59.956 38.462 0.00 0.00 31.21 3.07
1631 2121 7.677892 TCTTCAGATTAGGATTCATGATCAGG 58.322 38.462 0.00 0.00 36.43 3.86
1639 2129 5.867330 AGGATTCATGATCAGGTTCAGATC 58.133 41.667 7.33 4.98 41.72 2.75
1642 2132 5.705397 TTCATGATCAGGTTCAGATCCTT 57.295 39.130 7.33 0.00 40.87 3.36
1643 2133 5.287674 TCATGATCAGGTTCAGATCCTTC 57.712 43.478 7.33 0.00 40.87 3.46
1652 2142 3.473147 CAGATCCTTCTGCACCCAG 57.527 57.895 0.00 0.00 42.79 4.45
1653 2143 0.107312 CAGATCCTTCTGCACCCAGG 60.107 60.000 0.00 0.00 42.79 4.45
1654 2144 0.548682 AGATCCTTCTGCACCCAGGT 60.549 55.000 0.00 0.00 39.61 4.00
1655 2145 0.329596 GATCCTTCTGCACCCAGGTT 59.670 55.000 1.83 0.00 39.61 3.50
1656 2146 0.329596 ATCCTTCTGCACCCAGGTTC 59.670 55.000 1.83 0.00 39.61 3.62
1657 2147 1.059584 TCCTTCTGCACCCAGGTTCA 61.060 55.000 1.83 0.00 39.61 3.18
1658 2148 0.607489 CCTTCTGCACCCAGGTTCAG 60.607 60.000 9.89 9.89 39.96 3.02
1659 2149 0.397941 CTTCTGCACCCAGGTTCAGA 59.602 55.000 14.17 14.17 44.16 3.27
1660 2150 1.004044 CTTCTGCACCCAGGTTCAGAT 59.996 52.381 18.00 0.00 44.89 2.90
1661 2151 1.067295 TCTGCACCCAGGTTCAGATT 58.933 50.000 14.17 0.00 41.84 2.40
1662 2152 2.265367 TCTGCACCCAGGTTCAGATTA 58.735 47.619 14.17 0.00 41.84 1.75
1663 2153 2.237143 TCTGCACCCAGGTTCAGATTAG 59.763 50.000 14.17 0.00 41.84 1.73
1664 2154 1.281867 TGCACCCAGGTTCAGATTAGG 59.718 52.381 0.00 0.00 0.00 2.69
1665 2155 1.559682 GCACCCAGGTTCAGATTAGGA 59.440 52.381 0.00 0.00 0.00 2.94
1666 2156 2.173569 GCACCCAGGTTCAGATTAGGAT 59.826 50.000 0.00 0.00 0.00 3.24
1667 2157 3.372025 GCACCCAGGTTCAGATTAGGATT 60.372 47.826 0.00 0.00 0.00 3.01
1668 2158 4.455606 CACCCAGGTTCAGATTAGGATTC 58.544 47.826 0.00 0.00 0.00 2.52
1669 2159 4.080356 CACCCAGGTTCAGATTAGGATTCA 60.080 45.833 0.00 0.00 0.00 2.57
1670 2160 4.080299 ACCCAGGTTCAGATTAGGATTCAC 60.080 45.833 0.00 0.00 0.00 3.18
1671 2161 4.122776 CCAGGTTCAGATTAGGATTCACG 58.877 47.826 0.00 0.00 0.00 4.35
1672 2162 4.122776 CAGGTTCAGATTAGGATTCACGG 58.877 47.826 0.00 0.00 0.00 4.94
1673 2163 3.775316 AGGTTCAGATTAGGATTCACGGT 59.225 43.478 0.00 0.00 0.00 4.83
1674 2164 4.120589 GGTTCAGATTAGGATTCACGGTC 58.879 47.826 0.00 0.00 0.00 4.79
1675 2165 4.382685 GGTTCAGATTAGGATTCACGGTCA 60.383 45.833 0.00 0.00 0.00 4.02
1676 2166 4.386867 TCAGATTAGGATTCACGGTCAC 57.613 45.455 0.00 0.00 0.00 3.67
1677 2167 3.767131 TCAGATTAGGATTCACGGTCACA 59.233 43.478 0.00 0.00 0.00 3.58
1678 2168 4.405680 TCAGATTAGGATTCACGGTCACAT 59.594 41.667 0.00 0.00 0.00 3.21
1679 2169 5.104941 TCAGATTAGGATTCACGGTCACATT 60.105 40.000 0.00 0.00 0.00 2.71
1680 2170 5.235186 CAGATTAGGATTCACGGTCACATTC 59.765 44.000 0.00 0.00 0.00 2.67
1681 2171 4.545208 TTAGGATTCACGGTCACATTCA 57.455 40.909 0.00 0.00 0.00 2.57
1682 2172 2.977914 AGGATTCACGGTCACATTCAG 58.022 47.619 0.00 0.00 0.00 3.02
1683 2173 2.567169 AGGATTCACGGTCACATTCAGA 59.433 45.455 0.00 0.00 0.00 3.27
1684 2174 3.198635 AGGATTCACGGTCACATTCAGAT 59.801 43.478 0.00 0.00 0.00 2.90
1685 2175 3.557595 GGATTCACGGTCACATTCAGATC 59.442 47.826 0.00 0.00 0.00 2.75
1686 2176 3.676291 TTCACGGTCACATTCAGATCA 57.324 42.857 0.00 0.00 0.00 2.92
1687 2177 3.676291 TCACGGTCACATTCAGATCAA 57.324 42.857 0.00 0.00 0.00 2.57
1688 2178 4.206477 TCACGGTCACATTCAGATCAAT 57.794 40.909 0.00 0.00 0.00 2.57
1689 2179 3.934579 TCACGGTCACATTCAGATCAATG 59.065 43.478 4.62 4.62 39.35 2.82
1690 2180 3.686241 CACGGTCACATTCAGATCAATGT 59.314 43.478 5.76 5.76 46.00 2.71
1691 2181 4.869861 CACGGTCACATTCAGATCAATGTA 59.130 41.667 10.21 0.00 43.75 2.29
1692 2182 4.870426 ACGGTCACATTCAGATCAATGTAC 59.130 41.667 10.21 9.15 43.75 2.90
1720 2210 5.048573 ACGTCAGTATAAACGCCCAAAATTT 60.049 36.000 4.10 0.00 42.47 1.82
1726 2216 2.524569 AACGCCCAAAATTTCACCTG 57.475 45.000 0.00 0.00 0.00 4.00
1782 2291 3.802613 CAAGCACTGCTCGAGTACT 57.197 52.632 15.13 0.00 38.25 2.73
1784 2293 2.791567 CAAGCACTGCTCGAGTACTAG 58.208 52.381 15.13 9.99 38.25 2.57
1785 2294 2.116827 AGCACTGCTCGAGTACTAGT 57.883 50.000 15.13 10.61 30.62 2.57
1786 2295 2.011222 AGCACTGCTCGAGTACTAGTC 58.989 52.381 15.13 7.97 30.62 2.59
1787 2296 1.267632 GCACTGCTCGAGTACTAGTCG 60.268 57.143 15.13 6.93 42.10 4.18
1788 2297 1.328069 CACTGCTCGAGTACTAGTCGG 59.672 57.143 15.13 2.77 41.15 4.79
1790 2299 1.593933 CTGCTCGAGTACTAGTCGGAC 59.406 57.143 15.13 0.00 41.15 4.79
1791 2300 0.576328 GCTCGAGTACTAGTCGGACG 59.424 60.000 15.13 1.99 41.15 4.79
1792 2301 0.576328 CTCGAGTACTAGTCGGACGC 59.424 60.000 12.38 0.00 41.15 5.19
1824 2358 6.093909 CGGCATTCCATATCTACATGCATAAA 59.906 38.462 0.00 0.00 41.75 1.40
1908 2453 8.902540 TGATTACTTGTCAATGTATATCCACC 57.097 34.615 0.00 0.00 0.00 4.61
1909 2454 7.655732 TGATTACTTGTCAATGTATATCCACCG 59.344 37.037 0.00 0.00 0.00 4.94
1910 2455 5.353394 ACTTGTCAATGTATATCCACCGT 57.647 39.130 0.00 0.00 0.00 4.83
1911 2456 5.116180 ACTTGTCAATGTATATCCACCGTG 58.884 41.667 0.00 0.00 0.00 4.94
1916 2461 4.514816 TCAATGTATATCCACCGTGCAATG 59.485 41.667 0.00 0.00 0.00 2.82
1929 2474 3.745975 CCGTGCAATGGTACTGGTATATG 59.254 47.826 0.00 0.00 38.54 1.78
1936 2481 3.380393 TGGTACTGGTATATGGTGCTGT 58.620 45.455 0.00 0.00 0.00 4.40
1943 2488 2.604855 GGTATATGGTGCTGTCGACTCG 60.605 54.545 17.92 9.01 0.00 4.18
1944 2489 1.103803 ATATGGTGCTGTCGACTCGT 58.896 50.000 17.92 5.44 0.00 4.18
1982 2527 1.883544 CTGGAGCGAGCTGATGCAG 60.884 63.158 0.84 8.09 46.01 4.41
2012 2557 4.021719 CAGATCATCACCAAAGGCAAGTTT 60.022 41.667 0.00 0.00 0.00 2.66
2055 2600 3.214328 GACCGCCATCAGGTTAATGAAT 58.786 45.455 0.00 0.00 43.01 2.57
2059 2604 5.654650 ACCGCCATCAGGTTAATGAATAAAA 59.345 36.000 0.00 0.00 39.29 1.52
2084 2630 7.868906 ACATCTAGTCCTCTTTCTGTACTAC 57.131 40.000 0.00 0.00 0.00 2.73
2089 2635 5.508567 AGTCCTCTTTCTGTACTACCTACC 58.491 45.833 0.00 0.00 0.00 3.18
2095 2641 8.216423 CCTCTTTCTGTACTACCTACCTACATA 58.784 40.741 0.00 0.00 0.00 2.29
2096 2642 8.970859 TCTTTCTGTACTACCTACCTACATAC 57.029 38.462 0.00 0.00 0.00 2.39
2097 2643 8.551440 TCTTTCTGTACTACCTACCTACATACA 58.449 37.037 0.00 0.00 0.00 2.29
2135 2681 3.073062 ACTGGGAGTTAACTGCATGACTT 59.927 43.478 25.90 3.75 35.89 3.01
2160 2709 7.993101 TCATTCTGATTGATTTCTGTGATTCC 58.007 34.615 0.00 0.00 0.00 3.01
2342 2894 4.514441 CCGTGAGACGAAGGTATACATAGT 59.486 45.833 5.01 1.76 46.05 2.12
2343 2895 5.008415 CCGTGAGACGAAGGTATACATAGTT 59.992 44.000 5.01 0.00 46.05 2.24
2344 2896 6.203530 CCGTGAGACGAAGGTATACATAGTTA 59.796 42.308 5.01 0.00 46.05 2.24
2544 3132 5.221224 GGAACCGGAATGATTTATGATGCAA 60.221 40.000 9.46 0.00 0.00 4.08
2843 3498 2.692368 GAGGAGGGGGCATCCACA 60.692 66.667 5.57 0.00 39.50 4.17
2901 3556 1.465187 GCAATTAAGGTCGGTGCGTTC 60.465 52.381 0.00 0.00 0.00 3.95
2933 3588 3.568538 GGACTGCTTGTGCTTGTTAATG 58.431 45.455 0.00 0.00 40.48 1.90
3000 3657 1.002468 CTGGTGTTTTGCAGAACGAGG 60.002 52.381 14.67 2.54 32.18 4.63
3014 3671 1.993956 ACGAGGAGGAGAGATGATGG 58.006 55.000 0.00 0.00 0.00 3.51
3020 3682 2.627699 GGAGGAGAGATGATGGACTCAC 59.372 54.545 0.00 0.00 36.48 3.51
3022 3684 1.269517 GGAGAGATGATGGACTCACGC 60.270 57.143 0.00 0.00 36.48 5.34
3031 3693 0.032130 TGGACTCACGCAAGACAGAC 59.968 55.000 0.00 0.00 43.62 3.51
3032 3694 1.004277 GGACTCACGCAAGACAGACG 61.004 60.000 0.00 0.00 43.62 4.18
3033 3695 1.004277 GACTCACGCAAGACAGACGG 61.004 60.000 0.00 0.00 43.62 4.79
3034 3696 1.285950 CTCACGCAAGACAGACGGA 59.714 57.895 0.00 0.00 43.62 4.69
3280 3971 8.149647 TCCATTTCTGCATTTTCTTTGTTACAT 58.850 29.630 0.00 0.00 0.00 2.29
3323 4014 4.730600 CATGTGAATCACGTGTCAAAGA 57.269 40.909 23.44 0.00 43.81 2.52
3357 4048 1.470285 CGGCTAGCGCTTAGTTTACCA 60.470 52.381 18.68 0.00 36.09 3.25
3450 4145 9.260002 GTAAAAATCACAATGTTGTCTTTGGAT 57.740 29.630 0.00 0.00 39.91 3.41
3460 4156 9.403110 CAATGTTGTCTTTGGATCTTAGAAAAG 57.597 33.333 0.00 0.00 0.00 2.27
3525 4225 9.658475 CTCACTTATTAGTCGACTGAGATTTAG 57.342 37.037 28.12 13.55 30.26 1.85
3550 4252 9.395068 AGTAAACCCAAAAATATTTAAGGGGAA 57.605 29.630 28.26 17.02 38.18 3.97
3585 4287 7.455641 TTTGAAATAAATGCCCTTCTACGAA 57.544 32.000 0.00 0.00 0.00 3.85
3599 4301 5.694006 CCTTCTACGAAATGCATCCTTCTAG 59.306 44.000 0.00 5.67 0.00 2.43
3600 4302 4.621991 TCTACGAAATGCATCCTTCTAGC 58.378 43.478 0.00 0.00 0.00 3.42
3601 4303 3.550437 ACGAAATGCATCCTTCTAGCT 57.450 42.857 0.00 0.00 0.00 3.32
3602 4304 4.672587 ACGAAATGCATCCTTCTAGCTA 57.327 40.909 0.00 0.00 0.00 3.32
3603 4305 4.626042 ACGAAATGCATCCTTCTAGCTAG 58.374 43.478 15.01 15.01 0.00 3.42
3660 4362 4.988598 CCGCAGCGACCAAGGTGT 62.989 66.667 18.75 0.00 41.28 4.16
3806 4508 3.181967 CAGGCGACGCTTTCCTCG 61.182 66.667 20.77 0.00 0.00 4.63
3820 4522 4.744570 CTTTCCTCGTACACTGCAATCTA 58.255 43.478 0.00 0.00 0.00 1.98
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 3.753434 CACTGGAGCTCGTCGGCT 61.753 66.667 7.83 7.78 46.11 5.52
14 15 3.575351 AACACTGGAGCTCGTCGGC 62.575 63.158 7.83 0.00 0.00 5.54
15 16 1.444553 GAACACTGGAGCTCGTCGG 60.445 63.158 7.83 2.24 0.00 4.79
16 17 1.797933 CGAACACTGGAGCTCGTCG 60.798 63.158 7.83 5.97 0.00 5.12
17 18 0.171455 ATCGAACACTGGAGCTCGTC 59.829 55.000 7.83 0.00 33.15 4.20
18 19 0.109086 CATCGAACACTGGAGCTCGT 60.109 55.000 7.83 0.00 33.15 4.18
19 20 0.803768 CCATCGAACACTGGAGCTCG 60.804 60.000 7.83 0.00 34.24 5.03
20 21 1.086634 GCCATCGAACACTGGAGCTC 61.087 60.000 4.71 4.71 34.24 4.09
21 22 1.078848 GCCATCGAACACTGGAGCT 60.079 57.895 6.97 0.00 34.24 4.09
22 23 2.109126 GGCCATCGAACACTGGAGC 61.109 63.158 6.97 0.00 34.24 4.70
23 24 0.460987 GAGGCCATCGAACACTGGAG 60.461 60.000 5.01 0.00 34.24 3.86
24 25 1.191489 TGAGGCCATCGAACACTGGA 61.191 55.000 5.01 0.00 34.24 3.86
25 26 0.321564 TTGAGGCCATCGAACACTGG 60.322 55.000 5.01 0.00 35.53 4.00
26 27 0.798776 GTTGAGGCCATCGAACACTG 59.201 55.000 5.01 0.00 0.00 3.66
27 28 0.687354 AGTTGAGGCCATCGAACACT 59.313 50.000 5.01 0.00 0.00 3.55
28 29 1.079503 GAGTTGAGGCCATCGAACAC 58.920 55.000 5.01 0.00 0.00 3.32
29 30 0.684535 TGAGTTGAGGCCATCGAACA 59.315 50.000 5.01 0.00 0.00 3.18
30 31 1.363744 CTGAGTTGAGGCCATCGAAC 58.636 55.000 5.01 1.47 0.00 3.95
31 32 0.250234 CCTGAGTTGAGGCCATCGAA 59.750 55.000 5.01 0.00 0.00 3.71
32 33 1.900351 CCTGAGTTGAGGCCATCGA 59.100 57.895 5.01 0.00 0.00 3.59
33 34 4.528674 CCTGAGTTGAGGCCATCG 57.471 61.111 5.01 0.00 0.00 3.84
39 40 2.045536 GCTGGGCCTGAGTTGAGG 60.046 66.667 15.36 0.00 36.03 3.86
40 41 1.078567 GAGCTGGGCCTGAGTTGAG 60.079 63.158 15.36 0.00 0.00 3.02
41 42 2.596851 GGAGCTGGGCCTGAGTTGA 61.597 63.158 15.36 0.00 0.00 3.18
42 43 2.045536 GGAGCTGGGCCTGAGTTG 60.046 66.667 15.36 0.00 0.00 3.16
43 44 2.156098 TTGGAGCTGGGCCTGAGTT 61.156 57.895 15.36 0.00 0.00 3.01
44 45 2.530151 TTGGAGCTGGGCCTGAGT 60.530 61.111 15.36 0.00 0.00 3.41
45 46 2.045536 GTTGGAGCTGGGCCTGAG 60.046 66.667 15.36 0.00 0.00 3.35
46 47 4.020617 CGTTGGAGCTGGGCCTGA 62.021 66.667 15.36 0.00 0.00 3.86
50 51 4.096003 TAGGCGTTGGAGCTGGGC 62.096 66.667 0.00 0.00 37.29 5.36
51 52 2.187946 CTAGGCGTTGGAGCTGGG 59.812 66.667 0.00 0.00 37.29 4.45
52 53 2.512515 GCTAGGCGTTGGAGCTGG 60.513 66.667 0.00 0.00 37.29 4.85
64 65 4.286320 CCGCACTAGGCCGCTAGG 62.286 72.222 0.00 0.00 40.31 3.02
72 73 3.081311 TAGCAGCTGCCGCACTAGG 62.081 63.158 34.39 0.00 43.38 3.02
73 74 1.880340 GTAGCAGCTGCCGCACTAG 60.880 63.158 34.39 0.00 43.38 2.57
74 75 2.184322 GTAGCAGCTGCCGCACTA 59.816 61.111 34.39 17.43 43.38 2.74
87 88 9.301606 GTATTTTTGAAAAGAAAAATGCGTAGC 57.698 29.630 12.17 0.00 44.48 3.58
92 93 9.811655 GCCTAGTATTTTTGAAAAGAAAAATGC 57.188 29.630 12.17 11.05 42.68 3.56
111 112 8.319146 GCCAATGTTTCTTATATAGGCCTAGTA 58.681 37.037 19.33 10.83 33.68 1.82
112 113 7.168905 GCCAATGTTTCTTATATAGGCCTAGT 58.831 38.462 19.33 11.86 33.68 2.57
113 114 7.617041 GCCAATGTTTCTTATATAGGCCTAG 57.383 40.000 19.33 5.82 33.68 3.02
117 118 4.462834 GGGGCCAATGTTTCTTATATAGGC 59.537 45.833 4.39 0.00 38.84 3.93
118 119 5.016831 GGGGGCCAATGTTTCTTATATAGG 58.983 45.833 4.39 0.00 0.00 2.57
142 143 2.159114 CGAACAGGGCCCATAATTTTGG 60.159 50.000 27.56 7.89 36.46 3.28
143 144 2.159114 CCGAACAGGGCCCATAATTTTG 60.159 50.000 27.56 14.44 35.97 2.44
144 145 2.107366 CCGAACAGGGCCCATAATTTT 58.893 47.619 27.56 6.92 35.97 1.82
145 146 1.775385 CCGAACAGGGCCCATAATTT 58.225 50.000 27.56 8.93 35.97 1.82
146 147 3.513209 CCGAACAGGGCCCATAATT 57.487 52.632 27.56 12.33 35.97 1.40
159 160 2.126502 CAAATGTGCGGCCCGAAC 60.127 61.111 7.51 7.51 35.71 3.95
160 161 2.749706 TACCAAATGTGCGGCCCGAA 62.750 55.000 7.68 0.00 0.00 4.30
161 162 3.255423 TACCAAATGTGCGGCCCGA 62.255 57.895 7.68 0.00 0.00 5.14
162 163 2.748251 TACCAAATGTGCGGCCCG 60.748 61.111 0.00 0.00 0.00 6.13
163 164 2.706834 GGTACCAAATGTGCGGCCC 61.707 63.158 7.15 0.00 0.00 5.80
164 165 1.974343 TGGTACCAAATGTGCGGCC 60.974 57.895 13.60 0.00 0.00 6.13
165 166 1.211709 GTGGTACCAAATGTGCGGC 59.788 57.895 18.31 0.00 0.00 6.53
166 167 2.102070 TAGTGGTACCAAATGTGCGG 57.898 50.000 18.31 0.00 0.00 5.69
167 168 2.354510 CCATAGTGGTACCAAATGTGCG 59.645 50.000 25.78 14.10 31.35 5.34
168 169 2.687935 CCCATAGTGGTACCAAATGTGC 59.312 50.000 25.78 12.15 35.17 4.57
169 170 2.687935 GCCCATAGTGGTACCAAATGTG 59.312 50.000 25.78 20.62 35.17 3.21
170 171 2.357777 GGCCCATAGTGGTACCAAATGT 60.358 50.000 25.78 12.70 35.17 2.71
171 172 2.306847 GGCCCATAGTGGTACCAAATG 58.693 52.381 18.31 21.40 35.17 2.32
172 173 1.216930 GGGCCCATAGTGGTACCAAAT 59.783 52.381 19.95 10.74 35.17 2.32
173 174 0.626916 GGGCCCATAGTGGTACCAAA 59.373 55.000 19.95 8.56 35.17 3.28
174 175 1.628238 CGGGCCCATAGTGGTACCAA 61.628 60.000 24.92 1.51 35.17 3.67
175 176 2.067605 CGGGCCCATAGTGGTACCA 61.068 63.158 24.92 11.60 35.17 3.25
176 177 2.814835 CCGGGCCCATAGTGGTACC 61.815 68.421 24.92 4.43 35.17 3.34
177 178 2.826702 CCGGGCCCATAGTGGTAC 59.173 66.667 24.92 0.00 35.17 3.34
178 179 3.165685 GCCGGGCCCATAGTGGTA 61.166 66.667 24.92 0.00 35.17 3.25
194 195 2.188994 CTACTCAGCTGGCAGGGC 59.811 66.667 17.64 3.19 0.00 5.19
195 196 0.975040 ACTCTACTCAGCTGGCAGGG 60.975 60.000 17.64 10.87 0.00 4.45
196 197 1.680735 CTACTCTACTCAGCTGGCAGG 59.319 57.143 17.64 1.38 0.00 4.85
197 198 1.680735 CCTACTCTACTCAGCTGGCAG 59.319 57.143 15.13 10.94 0.00 4.85
198 199 1.006043 ACCTACTCTACTCAGCTGGCA 59.994 52.381 15.13 0.00 0.00 4.92
199 200 1.407258 CACCTACTCTACTCAGCTGGC 59.593 57.143 15.13 0.00 0.00 4.85
200 201 3.006112 TCACCTACTCTACTCAGCTGG 57.994 52.381 15.13 7.28 0.00 4.85
201 202 3.243367 GCATCACCTACTCTACTCAGCTG 60.243 52.174 7.63 7.63 0.00 4.24
202 203 2.955660 GCATCACCTACTCTACTCAGCT 59.044 50.000 0.00 0.00 0.00 4.24
203 204 2.690497 TGCATCACCTACTCTACTCAGC 59.310 50.000 0.00 0.00 0.00 4.26
204 205 4.203226 TCTGCATCACCTACTCTACTCAG 58.797 47.826 0.00 0.00 0.00 3.35
205 206 4.236527 TCTGCATCACCTACTCTACTCA 57.763 45.455 0.00 0.00 0.00 3.41
206 207 4.884744 TCTTCTGCATCACCTACTCTACTC 59.115 45.833 0.00 0.00 0.00 2.59
207 208 4.861196 TCTTCTGCATCACCTACTCTACT 58.139 43.478 0.00 0.00 0.00 2.57
208 209 4.884744 TCTCTTCTGCATCACCTACTCTAC 59.115 45.833 0.00 0.00 0.00 2.59
209 210 4.884744 GTCTCTTCTGCATCACCTACTCTA 59.115 45.833 0.00 0.00 0.00 2.43
210 211 3.699038 GTCTCTTCTGCATCACCTACTCT 59.301 47.826 0.00 0.00 0.00 3.24
211 212 3.488384 CGTCTCTTCTGCATCACCTACTC 60.488 52.174 0.00 0.00 0.00 2.59
212 213 2.425312 CGTCTCTTCTGCATCACCTACT 59.575 50.000 0.00 0.00 0.00 2.57
213 214 2.803451 CGTCTCTTCTGCATCACCTAC 58.197 52.381 0.00 0.00 0.00 3.18
214 215 1.135139 GCGTCTCTTCTGCATCACCTA 59.865 52.381 0.00 0.00 0.00 3.08
215 216 0.108424 GCGTCTCTTCTGCATCACCT 60.108 55.000 0.00 0.00 0.00 4.00
216 217 0.108424 AGCGTCTCTTCTGCATCACC 60.108 55.000 0.00 0.00 0.00 4.02
217 218 1.719600 AAGCGTCTCTTCTGCATCAC 58.280 50.000 0.00 0.00 0.00 3.06
218 219 3.592898 TTAAGCGTCTCTTCTGCATCA 57.407 42.857 0.00 0.00 36.25 3.07
219 220 5.261661 CAAATTAAGCGTCTCTTCTGCATC 58.738 41.667 0.00 0.00 36.25 3.91
220 221 4.437930 GCAAATTAAGCGTCTCTTCTGCAT 60.438 41.667 0.00 0.00 36.25 3.96
221 222 3.120199 GCAAATTAAGCGTCTCTTCTGCA 60.120 43.478 0.00 0.00 36.25 4.41
222 223 3.120199 TGCAAATTAAGCGTCTCTTCTGC 60.120 43.478 0.00 0.00 36.25 4.26
223 224 4.668576 TGCAAATTAAGCGTCTCTTCTG 57.331 40.909 0.00 0.00 36.25 3.02
224 225 4.095483 CCATGCAAATTAAGCGTCTCTTCT 59.905 41.667 0.00 0.00 36.25 2.85
225 226 4.142600 ACCATGCAAATTAAGCGTCTCTTC 60.143 41.667 0.00 0.00 36.25 2.87
226 227 3.758554 ACCATGCAAATTAAGCGTCTCTT 59.241 39.130 0.00 0.00 38.79 2.85
227 228 3.347216 ACCATGCAAATTAAGCGTCTCT 58.653 40.909 0.00 0.00 33.85 3.10
228 229 3.764885 ACCATGCAAATTAAGCGTCTC 57.235 42.857 0.00 0.00 33.85 3.36
229 230 3.505680 TCAACCATGCAAATTAAGCGTCT 59.494 39.130 0.00 0.00 33.85 4.18
230 231 3.832276 TCAACCATGCAAATTAAGCGTC 58.168 40.909 0.00 0.00 33.85 5.19
231 232 3.367292 CCTCAACCATGCAAATTAAGCGT 60.367 43.478 0.00 0.00 33.85 5.07
232 233 3.181397 CCTCAACCATGCAAATTAAGCG 58.819 45.455 0.00 0.00 33.85 4.68
233 234 2.931969 GCCTCAACCATGCAAATTAAGC 59.068 45.455 0.00 0.00 0.00 3.09
234 235 4.191033 TGCCTCAACCATGCAAATTAAG 57.809 40.909 0.00 0.00 30.85 1.85
235 236 4.282957 TCTTGCCTCAACCATGCAAATTAA 59.717 37.500 0.00 0.00 43.69 1.40
236 237 3.831333 TCTTGCCTCAACCATGCAAATTA 59.169 39.130 0.00 0.00 43.69 1.40
237 238 2.633967 TCTTGCCTCAACCATGCAAATT 59.366 40.909 0.00 0.00 43.69 1.82
238 239 2.232941 CTCTTGCCTCAACCATGCAAAT 59.767 45.455 0.00 0.00 43.69 2.32
239 240 1.614903 CTCTTGCCTCAACCATGCAAA 59.385 47.619 0.00 0.00 43.69 3.68
257 258 2.478831 AGGTAGTAGTAGTACGCGCTC 58.521 52.381 5.73 0.00 33.97 5.03
259 260 3.059529 GGTTAGGTAGTAGTAGTACGCGC 60.060 52.174 5.73 0.00 33.97 6.86
266 267 5.363939 ACGTGCTAGGTTAGGTAGTAGTAG 58.636 45.833 0.00 0.00 0.00 2.57
270 271 3.200825 AGGACGTGCTAGGTTAGGTAGTA 59.799 47.826 8.23 0.00 0.00 1.82
271 272 2.025510 AGGACGTGCTAGGTTAGGTAGT 60.026 50.000 8.23 0.00 0.00 2.73
272 273 2.617774 GAGGACGTGCTAGGTTAGGTAG 59.382 54.545 10.47 0.00 0.00 3.18
273 274 2.648059 GAGGACGTGCTAGGTTAGGTA 58.352 52.381 10.47 0.00 0.00 3.08
274 275 1.472188 GAGGACGTGCTAGGTTAGGT 58.528 55.000 10.47 0.00 0.00 3.08
275 276 0.745468 GGAGGACGTGCTAGGTTAGG 59.255 60.000 10.47 0.00 0.00 2.69
276 277 0.745468 GGGAGGACGTGCTAGGTTAG 59.255 60.000 10.47 0.00 0.00 2.34
277 278 1.033746 CGGGAGGACGTGCTAGGTTA 61.034 60.000 10.47 0.00 0.00 2.85
278 279 2.348888 CGGGAGGACGTGCTAGGTT 61.349 63.158 10.47 0.00 0.00 3.50
317 318 6.053650 GGAAATGGAACCCGCCTATATATAC 58.946 44.000 0.00 0.00 0.00 1.47
322 323 1.071071 CGGAAATGGAACCCGCCTATA 59.929 52.381 0.00 0.00 36.62 1.31
348 350 3.458163 ATGCAGCACAGGCCATGC 61.458 61.111 21.30 21.30 42.56 4.06
361 388 4.067913 TGACTCGGAGCGCATGCA 62.068 61.111 19.57 0.00 46.23 3.96
369 396 1.142748 GGCCATGAGTGACTCGGAG 59.857 63.158 8.23 2.83 32.35 4.63
371 398 0.103208 GTAGGCCATGAGTGACTCGG 59.897 60.000 5.01 5.16 32.35 4.63
372 399 0.817654 TGTAGGCCATGAGTGACTCG 59.182 55.000 5.01 0.00 32.35 4.18
373 400 2.224161 GGATGTAGGCCATGAGTGACTC 60.224 54.545 5.01 5.47 32.56 3.36
374 401 1.765314 GGATGTAGGCCATGAGTGACT 59.235 52.381 5.01 0.00 32.56 3.41
375 402 1.486310 TGGATGTAGGCCATGAGTGAC 59.514 52.381 5.01 0.00 32.56 3.67
376 403 1.878211 TGGATGTAGGCCATGAGTGA 58.122 50.000 5.01 0.00 32.56 3.41
384 411 2.281761 CGGGCATGGATGTAGGCC 60.282 66.667 0.00 0.00 46.30 5.19
385 412 2.281761 CCGGGCATGGATGTAGGC 60.282 66.667 0.00 0.00 0.00 3.93
386 413 2.397413 GACCCGGGCATGGATGTAGG 62.397 65.000 24.08 0.00 0.00 3.18
387 414 1.071471 GACCCGGGCATGGATGTAG 59.929 63.158 24.08 0.00 0.00 2.74
388 415 1.059584 ATGACCCGGGCATGGATGTA 61.060 55.000 24.08 0.00 0.00 2.29
389 416 1.936767 AATGACCCGGGCATGGATGT 61.937 55.000 24.08 6.80 0.00 3.06
390 417 1.152694 AATGACCCGGGCATGGATG 60.153 57.895 24.08 0.00 0.00 3.51
391 418 1.151450 GAATGACCCGGGCATGGAT 59.849 57.895 24.08 10.23 0.00 3.41
392 419 2.595095 GAATGACCCGGGCATGGA 59.405 61.111 24.08 0.00 0.00 3.41
393 420 2.901840 CGAATGACCCGGGCATGG 60.902 66.667 24.08 15.93 0.00 3.66
394 421 2.124736 ACGAATGACCCGGGCATG 60.125 61.111 24.08 15.67 0.00 4.06
395 422 2.189521 GACGAATGACCCGGGCAT 59.810 61.111 24.08 21.93 0.00 4.40
396 423 4.090588 GGACGAATGACCCGGGCA 62.091 66.667 24.08 20.52 0.00 5.36
397 424 3.615509 TTGGACGAATGACCCGGGC 62.616 63.158 24.08 14.70 0.00 6.13
398 425 1.003112 TTTGGACGAATGACCCGGG 60.003 57.895 22.25 22.25 0.00 5.73
399 426 1.644786 GCTTTGGACGAATGACCCGG 61.645 60.000 0.00 0.00 0.00 5.73
400 427 0.673644 AGCTTTGGACGAATGACCCG 60.674 55.000 0.00 0.00 0.00 5.28
401 428 2.007608 GTAGCTTTGGACGAATGACCC 58.992 52.381 0.00 0.00 0.00 4.46
402 429 1.659098 CGTAGCTTTGGACGAATGACC 59.341 52.381 0.33 0.00 41.60 4.02
412 439 2.180204 CGGCCCATCGTAGCTTTGG 61.180 63.158 0.00 0.00 0.00 3.28
414 441 2.189521 CCGGCCCATCGTAGCTTT 59.810 61.111 0.00 0.00 0.00 3.51
457 484 2.425124 CGACAGTTTGTTGGCGCG 60.425 61.111 0.00 0.00 43.43 6.86
495 638 0.883370 AAAGCGAAAGTCCGTGACCC 60.883 55.000 0.00 0.00 32.18 4.46
509 657 2.782615 CGTTTCCGGCCTAAAGCG 59.217 61.111 0.00 4.94 45.17 4.68
611 760 2.556287 GCGTGGAGCGGAACAAAG 59.444 61.111 0.00 0.00 41.69 2.77
660 809 0.928922 CTGTATCAGCAGCGCTTGAG 59.071 55.000 16.31 3.42 36.40 3.02
661 810 3.055144 CTGTATCAGCAGCGCTTGA 57.945 52.632 7.50 11.44 36.40 3.02
700 930 1.135053 GGGGTAGCTTTGACGACTCTC 60.135 57.143 0.00 0.00 0.00 3.20
705 935 1.547372 GTAGTGGGGTAGCTTTGACGA 59.453 52.381 0.00 0.00 0.00 4.20
706 936 1.274167 TGTAGTGGGGTAGCTTTGACG 59.726 52.381 0.00 0.00 0.00 4.35
731 974 4.430765 GGGAAGCTTCGTCCGCGA 62.431 66.667 19.91 0.00 46.36 5.87
760 1003 2.424842 ATTGCCGGGAAGCACCTCAA 62.425 55.000 15.53 0.81 43.97 3.02
761 1004 2.424842 AATTGCCGGGAAGCACCTCA 62.425 55.000 15.53 0.00 43.97 3.86
762 1005 1.678970 AATTGCCGGGAAGCACCTC 60.679 57.895 15.53 0.00 43.97 3.85
763 1006 1.978617 CAATTGCCGGGAAGCACCT 60.979 57.895 15.53 0.00 43.97 4.00
764 1007 2.573340 CAATTGCCGGGAAGCACC 59.427 61.111 15.53 0.00 43.97 5.01
765 1008 2.125952 GCAATTGCCGGGAAGCAC 60.126 61.111 20.06 1.44 43.97 4.40
766 1009 3.746889 CGCAATTGCCGGGAAGCA 61.747 61.111 24.24 0.00 42.17 3.91
768 1011 3.443045 AGCGCAATTGCCGGGAAG 61.443 61.111 24.24 10.38 37.91 3.46
769 1012 3.746889 CAGCGCAATTGCCGGGAA 61.747 61.111 24.24 12.06 37.91 3.97
772 1015 4.501714 ATGCAGCGCAATTGCCGG 62.502 61.111 24.24 17.38 43.62 6.13
773 1016 3.251763 CATGCAGCGCAATTGCCG 61.252 61.111 24.24 19.08 43.62 5.69
774 1017 3.560278 GCATGCAGCGCAATTGCC 61.560 61.111 24.24 16.48 43.62 4.52
814 1057 3.744719 TTCCGGTGAGAGTCCGCG 61.745 66.667 0.00 0.00 45.71 6.46
815 1058 2.126031 GTTCCGGTGAGAGTCCGC 60.126 66.667 0.00 0.00 45.71 5.54
816 1059 1.213013 CTGTTCCGGTGAGAGTCCG 59.787 63.158 0.00 0.00 46.49 4.79
817 1060 0.528470 CTCTGTTCCGGTGAGAGTCC 59.472 60.000 15.04 0.00 0.00 3.85
818 1061 1.535833 TCTCTGTTCCGGTGAGAGTC 58.464 55.000 19.71 0.00 35.65 3.36
819 1062 2.223803 ATCTCTGTTCCGGTGAGAGT 57.776 50.000 19.71 9.84 39.74 3.24
820 1063 3.546724 TCTATCTCTGTTCCGGTGAGAG 58.453 50.000 16.41 16.41 39.74 3.20
821 1064 3.546724 CTCTATCTCTGTTCCGGTGAGA 58.453 50.000 16.60 16.60 40.52 3.27
822 1065 2.621055 CCTCTATCTCTGTTCCGGTGAG 59.379 54.545 0.00 5.80 0.00 3.51
823 1066 2.656002 CCTCTATCTCTGTTCCGGTGA 58.344 52.381 0.00 0.00 0.00 4.02
824 1067 1.683917 CCCTCTATCTCTGTTCCGGTG 59.316 57.143 0.00 0.00 0.00 4.94
825 1068 1.411787 CCCCTCTATCTCTGTTCCGGT 60.412 57.143 0.00 0.00 0.00 5.28
826 1069 1.333177 CCCCTCTATCTCTGTTCCGG 58.667 60.000 0.00 0.00 0.00 5.14
827 1070 0.676736 GCCCCTCTATCTCTGTTCCG 59.323 60.000 0.00 0.00 0.00 4.30
828 1071 2.095604 AGCCCCTCTATCTCTGTTCC 57.904 55.000 0.00 0.00 0.00 3.62
829 1072 2.894765 GGTAGCCCCTCTATCTCTGTTC 59.105 54.545 0.00 0.00 0.00 3.18
830 1073 2.520549 AGGTAGCCCCTCTATCTCTGTT 59.479 50.000 0.00 0.00 40.71 3.16
831 1074 2.148702 AGGTAGCCCCTCTATCTCTGT 58.851 52.381 0.00 0.00 40.71 3.41
832 1075 2.990740 AGGTAGCCCCTCTATCTCTG 57.009 55.000 0.00 0.00 40.71 3.35
833 1076 2.650827 GGTAGGTAGCCCCTCTATCTCT 59.349 54.545 0.00 0.00 44.81 3.10
834 1077 2.379226 TGGTAGGTAGCCCCTCTATCTC 59.621 54.545 0.00 0.00 44.81 2.75
838 1081 1.616871 AGTGGTAGGTAGCCCCTCTA 58.383 55.000 0.00 0.00 44.81 2.43
844 1087 2.896044 GGTATGGTAGTGGTAGGTAGCC 59.104 54.545 0.00 0.00 0.00 3.93
850 1093 3.101437 TGTGTGGGTATGGTAGTGGTAG 58.899 50.000 0.00 0.00 0.00 3.18
851 1094 2.833338 GTGTGTGGGTATGGTAGTGGTA 59.167 50.000 0.00 0.00 0.00 3.25
852 1095 1.626825 GTGTGTGGGTATGGTAGTGGT 59.373 52.381 0.00 0.00 0.00 4.16
853 1096 1.065709 GGTGTGTGGGTATGGTAGTGG 60.066 57.143 0.00 0.00 0.00 4.00
854 1097 1.906574 AGGTGTGTGGGTATGGTAGTG 59.093 52.381 0.00 0.00 0.00 2.74
855 1098 2.304761 CAAGGTGTGTGGGTATGGTAGT 59.695 50.000 0.00 0.00 0.00 2.73
866 1109 1.152984 TGGAGCACCAAGGTGTGTG 60.153 57.895 19.58 3.92 46.90 3.82
888 1131 4.996434 GGAGCACAGCACAGCGGT 62.996 66.667 0.00 0.00 37.46 5.68
890 1133 3.300934 TAGGGAGCACAGCACAGCG 62.301 63.158 0.00 0.00 35.48 5.18
891 1134 1.743252 GTAGGGAGCACAGCACAGC 60.743 63.158 0.00 0.00 0.00 4.40
892 1135 0.671781 GTGTAGGGAGCACAGCACAG 60.672 60.000 0.00 0.00 36.88 3.66
893 1136 1.371183 GTGTAGGGAGCACAGCACA 59.629 57.895 0.00 0.00 36.88 4.57
894 1137 1.371183 TGTGTAGGGAGCACAGCAC 59.629 57.895 0.00 0.00 41.32 4.40
895 1138 3.884318 TGTGTAGGGAGCACAGCA 58.116 55.556 0.00 0.00 41.32 4.41
899 1142 0.876342 GCGCTATGTGTAGGGAGCAC 60.876 60.000 0.00 0.00 41.92 4.40
900 1143 1.441729 GCGCTATGTGTAGGGAGCA 59.558 57.895 0.00 0.00 41.92 4.26
901 1144 1.301009 GGCGCTATGTGTAGGGAGC 60.301 63.158 7.64 0.00 41.92 4.70
902 1145 1.367840 GGGCGCTATGTGTAGGGAG 59.632 63.158 7.64 0.00 41.92 4.30
934 1177 0.603707 TGAAACAAGCGGCAGAGGAG 60.604 55.000 1.45 0.00 0.00 3.69
973 1419 2.747855 GCCTGGAACCTTGGAGCG 60.748 66.667 0.00 0.00 0.00 5.03
979 1425 1.679898 CCTCTTCGCCTGGAACCTT 59.320 57.895 0.00 0.00 0.00 3.50
980 1426 2.960688 GCCTCTTCGCCTGGAACCT 61.961 63.158 0.00 0.00 0.00 3.50
989 1435 1.958205 CCCATCATCGCCTCTTCGC 60.958 63.158 0.00 0.00 0.00 4.70
990 1436 1.301244 CCCCATCATCGCCTCTTCG 60.301 63.158 0.00 0.00 0.00 3.79
999 1445 4.335647 ATCCCGCGCCCCATCATC 62.336 66.667 0.00 0.00 0.00 2.92
1181 1627 4.468689 GGAAGGAACGGGCGGAGG 62.469 72.222 0.00 0.00 0.00 4.30
1185 1631 2.813908 CGAAGGAAGGAACGGGCG 60.814 66.667 0.00 0.00 0.00 6.13
1186 1632 1.740664 GACGAAGGAAGGAACGGGC 60.741 63.158 0.00 0.00 0.00 6.13
1187 1633 1.445582 CGACGAAGGAAGGAACGGG 60.446 63.158 0.00 0.00 0.00 5.28
1188 1634 0.172803 ATCGACGAAGGAAGGAACGG 59.827 55.000 0.00 0.00 0.00 4.44
1189 1635 1.132643 AGATCGACGAAGGAAGGAACG 59.867 52.381 0.00 0.00 0.00 3.95
1190 1636 2.943449 AGATCGACGAAGGAAGGAAC 57.057 50.000 0.00 0.00 0.00 3.62
1191 1637 3.090037 AGAAGATCGACGAAGGAAGGAA 58.910 45.455 0.00 0.00 0.00 3.36
1192 1638 2.724454 AGAAGATCGACGAAGGAAGGA 58.276 47.619 0.00 0.00 0.00 3.36
1193 1639 3.129638 AGAAGAAGATCGACGAAGGAAGG 59.870 47.826 0.00 0.00 0.00 3.46
1194 1640 4.347813 GAGAAGAAGATCGACGAAGGAAG 58.652 47.826 0.00 0.00 0.00 3.46
1240 1686 2.733552 CAGGATATCCGAAATCAGTGCG 59.266 50.000 16.21 0.00 42.08 5.34
1269 1721 5.220739 GGATCAGATTGAAAATGGACGTGAG 60.221 44.000 0.00 0.00 0.00 3.51
1287 1739 0.395311 ACAGGGCATTGCAGGATCAG 60.395 55.000 11.39 0.00 0.00 2.90
1314 1802 4.005650 ACACAGGAACGAGTACTAATCGA 58.994 43.478 12.58 0.00 42.76 3.59
1316 1804 7.758528 ACATTTACACAGGAACGAGTACTAATC 59.241 37.037 0.00 0.00 0.00 1.75
1317 1805 7.544566 CACATTTACACAGGAACGAGTACTAAT 59.455 37.037 0.00 0.00 0.00 1.73
1318 1806 6.864685 CACATTTACACAGGAACGAGTACTAA 59.135 38.462 0.00 0.00 0.00 2.24
1319 1807 6.016024 ACACATTTACACAGGAACGAGTACTA 60.016 38.462 0.00 0.00 0.00 1.82
1320 1808 5.221382 ACACATTTACACAGGAACGAGTACT 60.221 40.000 0.00 0.00 0.00 2.73
1321 1809 4.986659 ACACATTTACACAGGAACGAGTAC 59.013 41.667 0.00 0.00 0.00 2.73
1322 1810 4.986034 CACACATTTACACAGGAACGAGTA 59.014 41.667 0.00 0.00 0.00 2.59
1323 1811 3.807622 CACACATTTACACAGGAACGAGT 59.192 43.478 0.00 0.00 0.00 4.18
1324 1812 3.807622 ACACACATTTACACAGGAACGAG 59.192 43.478 0.00 0.00 0.00 4.18
1325 1813 3.558006 CACACACATTTACACAGGAACGA 59.442 43.478 0.00 0.00 0.00 3.85
1326 1814 3.303725 CCACACACATTTACACAGGAACG 60.304 47.826 0.00 0.00 0.00 3.95
1327 1815 3.630312 ACCACACACATTTACACAGGAAC 59.370 43.478 0.00 0.00 0.00 3.62
1328 1816 3.629855 CACCACACACATTTACACAGGAA 59.370 43.478 0.00 0.00 0.00 3.36
1360 1848 2.498167 AGTGCAGAATTTCGCTTGTCT 58.502 42.857 12.21 5.55 0.00 3.41
1397 1885 6.662755 AGGAATGCAGATTCAGTAATTGGTA 58.337 36.000 2.65 0.00 39.98 3.25
1473 1961 7.663081 TGGCATGCAAAATAAATTGGTTCTTAA 59.337 29.630 21.36 0.00 0.00 1.85
1474 1962 7.164122 TGGCATGCAAAATAAATTGGTTCTTA 58.836 30.769 21.36 0.00 0.00 2.10
1475 1963 6.002704 TGGCATGCAAAATAAATTGGTTCTT 58.997 32.000 21.36 0.00 0.00 2.52
1476 1964 5.558818 TGGCATGCAAAATAAATTGGTTCT 58.441 33.333 21.36 0.00 0.00 3.01
1477 1965 5.876612 TGGCATGCAAAATAAATTGGTTC 57.123 34.783 21.36 0.00 0.00 3.62
1478 1966 5.064962 CGATGGCATGCAAAATAAATTGGTT 59.935 36.000 21.36 0.00 0.00 3.67
1480 1968 4.571580 ACGATGGCATGCAAAATAAATTGG 59.428 37.500 21.36 0.00 0.00 3.16
1484 1972 4.142578 ACGTACGATGGCATGCAAAATAAA 60.143 37.500 24.41 0.00 0.00 1.40
1485 1973 3.375610 ACGTACGATGGCATGCAAAATAA 59.624 39.130 24.41 0.00 0.00 1.40
1486 1974 2.939756 ACGTACGATGGCATGCAAAATA 59.060 40.909 24.41 1.86 0.00 1.40
1487 1975 1.742831 ACGTACGATGGCATGCAAAAT 59.257 42.857 24.41 9.79 0.00 1.82
1491 1979 0.874175 GCTACGTACGATGGCATGCA 60.874 55.000 24.41 6.13 0.00 3.96
1520 2008 2.988010 ACAAGCGATAAGAGCATCCA 57.012 45.000 0.00 0.00 37.01 3.41
1535 2023 3.997021 AGACTAATTGAGCGTGGAACAAG 59.003 43.478 0.00 0.00 44.16 3.16
1536 2024 4.002906 AGACTAATTGAGCGTGGAACAA 57.997 40.909 0.00 0.00 44.16 2.83
1544 2032 9.363763 ACATATCATCATAAGACTAATTGAGCG 57.636 33.333 0.00 0.00 0.00 5.03
1576 2066 6.650807 TCACGATTGAACTCAGAGCTAAATTT 59.349 34.615 0.00 0.00 0.00 1.82
1590 2080 3.002791 TGAAGATGCCTCACGATTGAAC 58.997 45.455 0.00 0.00 0.00 3.18
1601 2091 5.901413 TGAATCCTAATCTGAAGATGCCT 57.099 39.130 0.00 0.00 34.49 4.75
1639 2129 1.455849 TGAACCTGGGTGCAGAAGG 59.544 57.895 7.55 7.55 37.11 3.46
1646 2136 4.080356 TGAATCCTAATCTGAACCTGGGTG 60.080 45.833 0.00 0.00 0.00 4.61
1648 2138 4.455606 GTGAATCCTAATCTGAACCTGGG 58.544 47.826 0.00 0.00 0.00 4.45
1649 2139 4.122776 CGTGAATCCTAATCTGAACCTGG 58.877 47.826 0.00 0.00 0.00 4.45
1650 2140 4.122776 CCGTGAATCCTAATCTGAACCTG 58.877 47.826 0.00 0.00 0.00 4.00
1651 2141 3.775316 ACCGTGAATCCTAATCTGAACCT 59.225 43.478 0.00 0.00 0.00 3.50
1652 2142 4.120589 GACCGTGAATCCTAATCTGAACC 58.879 47.826 0.00 0.00 0.00 3.62
1653 2143 4.567159 GTGACCGTGAATCCTAATCTGAAC 59.433 45.833 0.00 0.00 0.00 3.18
1654 2144 4.221924 TGTGACCGTGAATCCTAATCTGAA 59.778 41.667 0.00 0.00 0.00 3.02
1655 2145 3.767131 TGTGACCGTGAATCCTAATCTGA 59.233 43.478 0.00 0.00 0.00 3.27
1656 2146 4.123497 TGTGACCGTGAATCCTAATCTG 57.877 45.455 0.00 0.00 0.00 2.90
1657 2147 5.104941 TGAATGTGACCGTGAATCCTAATCT 60.105 40.000 0.00 0.00 0.00 2.40
1658 2148 5.116180 TGAATGTGACCGTGAATCCTAATC 58.884 41.667 0.00 0.00 0.00 1.75
1659 2149 5.097742 TGAATGTGACCGTGAATCCTAAT 57.902 39.130 0.00 0.00 0.00 1.73
1660 2150 4.221924 TCTGAATGTGACCGTGAATCCTAA 59.778 41.667 0.00 0.00 0.00 2.69
1661 2151 3.767131 TCTGAATGTGACCGTGAATCCTA 59.233 43.478 0.00 0.00 0.00 2.94
1662 2152 2.567169 TCTGAATGTGACCGTGAATCCT 59.433 45.455 0.00 0.00 0.00 3.24
1663 2153 2.972625 TCTGAATGTGACCGTGAATCC 58.027 47.619 0.00 0.00 0.00 3.01
1664 2154 4.183865 TGATCTGAATGTGACCGTGAATC 58.816 43.478 0.00 0.00 0.00 2.52
1665 2155 4.206477 TGATCTGAATGTGACCGTGAAT 57.794 40.909 0.00 0.00 0.00 2.57
1666 2156 3.676291 TGATCTGAATGTGACCGTGAA 57.324 42.857 0.00 0.00 0.00 3.18
1667 2157 3.676291 TTGATCTGAATGTGACCGTGA 57.324 42.857 0.00 0.00 0.00 4.35
1668 2158 3.686241 ACATTGATCTGAATGTGACCGTG 59.314 43.478 9.88 0.00 43.45 4.94
1669 2159 3.942829 ACATTGATCTGAATGTGACCGT 58.057 40.909 9.88 0.00 43.45 4.83
1670 2160 4.271049 GGTACATTGATCTGAATGTGACCG 59.729 45.833 17.41 0.00 44.51 4.79
1671 2161 4.576463 GGGTACATTGATCTGAATGTGACC 59.424 45.833 17.41 17.61 44.51 4.02
1672 2162 4.576463 GGGGTACATTGATCTGAATGTGAC 59.424 45.833 17.41 11.42 44.51 3.67
1673 2163 4.227073 TGGGGTACATTGATCTGAATGTGA 59.773 41.667 17.41 3.98 44.51 3.58
1674 2164 4.336433 GTGGGGTACATTGATCTGAATGTG 59.664 45.833 17.41 1.38 44.51 3.21
1675 2165 4.526970 GTGGGGTACATTGATCTGAATGT 58.473 43.478 13.97 13.97 46.14 2.71
1676 2166 3.561310 CGTGGGGTACATTGATCTGAATG 59.439 47.826 4.62 4.62 38.97 2.67
1677 2167 3.199946 ACGTGGGGTACATTGATCTGAAT 59.800 43.478 0.00 0.00 0.00 2.57
1678 2168 2.569853 ACGTGGGGTACATTGATCTGAA 59.430 45.455 0.00 0.00 0.00 3.02
1679 2169 2.167693 GACGTGGGGTACATTGATCTGA 59.832 50.000 0.00 0.00 0.00 3.27
1680 2170 2.093711 TGACGTGGGGTACATTGATCTG 60.094 50.000 0.00 0.00 0.00 2.90
1681 2171 2.168521 CTGACGTGGGGTACATTGATCT 59.831 50.000 0.00 0.00 0.00 2.75
1682 2172 2.093658 ACTGACGTGGGGTACATTGATC 60.094 50.000 0.00 0.00 0.00 2.92
1683 2173 1.906574 ACTGACGTGGGGTACATTGAT 59.093 47.619 0.00 0.00 0.00 2.57
1684 2174 1.344065 ACTGACGTGGGGTACATTGA 58.656 50.000 0.00 0.00 0.00 2.57
1685 2175 3.536956 ATACTGACGTGGGGTACATTG 57.463 47.619 0.00 0.00 0.00 2.82
1686 2176 5.422145 GTTTATACTGACGTGGGGTACATT 58.578 41.667 0.00 0.00 0.00 2.71
1687 2177 4.440525 CGTTTATACTGACGTGGGGTACAT 60.441 45.833 0.00 0.00 34.75 2.29
1688 2178 3.119531 CGTTTATACTGACGTGGGGTACA 60.120 47.826 0.00 0.00 34.75 2.90
1689 2179 3.438360 CGTTTATACTGACGTGGGGTAC 58.562 50.000 0.00 0.00 34.75 3.34
1690 2180 2.159254 GCGTTTATACTGACGTGGGGTA 60.159 50.000 0.00 0.00 41.10 3.69
1691 2181 1.404583 GCGTTTATACTGACGTGGGGT 60.405 52.381 0.00 0.00 41.10 4.95
1692 2182 1.283736 GCGTTTATACTGACGTGGGG 58.716 55.000 0.00 0.00 41.10 4.96
1726 2216 4.202245 TGGCTAATTACCTGTGACTGAC 57.798 45.455 0.00 0.00 0.00 3.51
1773 2282 0.576328 GCGTCCGACTAGTACTCGAG 59.424 60.000 11.84 11.84 32.65 4.04
1774 2283 0.807667 GGCGTCCGACTAGTACTCGA 60.808 60.000 0.00 0.00 32.65 4.04
1775 2284 1.640604 GGCGTCCGACTAGTACTCG 59.359 63.158 0.00 0.00 0.00 4.18
1795 2304 1.003118 GTAGATATGGAATGCCGGCCA 59.997 52.381 26.77 15.48 38.78 5.36
1797 2306 2.472695 TGTAGATATGGAATGCCGGC 57.527 50.000 22.73 22.73 36.79 6.13
1798 2307 2.679837 GCATGTAGATATGGAATGCCGG 59.320 50.000 0.00 0.00 38.12 6.13
1799 2308 3.337358 TGCATGTAGATATGGAATGCCG 58.663 45.455 3.71 0.00 42.31 5.69
1801 2310 6.963242 CGTTTATGCATGTAGATATGGAATGC 59.037 38.462 10.16 0.00 43.08 3.56
1802 2311 8.032952 ACGTTTATGCATGTAGATATGGAATG 57.967 34.615 10.16 0.00 32.05 2.67
1804 2313 7.330946 GCTACGTTTATGCATGTAGATATGGAA 59.669 37.037 20.42 0.00 38.19 3.53
1805 2314 6.811665 GCTACGTTTATGCATGTAGATATGGA 59.188 38.462 20.42 0.00 38.19 3.41
1806 2315 6.589907 TGCTACGTTTATGCATGTAGATATGG 59.410 38.462 20.42 1.57 38.19 2.74
1824 2358 4.692155 GGTGTTGTTTAGGTTATGCTACGT 59.308 41.667 0.00 0.00 0.00 3.57
1898 2432 2.846193 ACCATTGCACGGTGGATATAC 58.154 47.619 16.53 0.00 38.86 1.47
1901 2446 1.834896 AGTACCATTGCACGGTGGATA 59.165 47.619 15.80 0.00 38.86 2.59
1902 2447 0.618458 AGTACCATTGCACGGTGGAT 59.382 50.000 15.80 5.22 38.86 3.41
1903 2448 0.321210 CAGTACCATTGCACGGTGGA 60.321 55.000 15.80 3.79 38.86 4.02
1904 2449 1.305219 CCAGTACCATTGCACGGTGG 61.305 60.000 15.80 12.70 41.35 4.61
1905 2450 0.605319 ACCAGTACCATTGCACGGTG 60.605 55.000 15.80 3.15 37.33 4.94
1906 2451 0.978151 TACCAGTACCATTGCACGGT 59.022 50.000 11.59 11.59 40.73 4.83
1907 2452 2.325583 ATACCAGTACCATTGCACGG 57.674 50.000 0.00 0.00 0.00 4.94
1908 2453 3.745975 CCATATACCAGTACCATTGCACG 59.254 47.826 0.00 0.00 0.00 5.34
1909 2454 4.515191 CACCATATACCAGTACCATTGCAC 59.485 45.833 0.00 0.00 0.00 4.57
1910 2455 4.713553 CACCATATACCAGTACCATTGCA 58.286 43.478 0.00 0.00 0.00 4.08
1911 2456 3.502211 GCACCATATACCAGTACCATTGC 59.498 47.826 0.00 0.00 0.00 3.56
1916 2461 3.552273 CGACAGCACCATATACCAGTACC 60.552 52.174 0.00 0.00 0.00 3.34
1929 2474 1.007734 TGAACGAGTCGACAGCACC 60.008 57.895 21.50 4.39 0.00 5.01
1936 2481 3.364889 AATGACAAGTGAACGAGTCGA 57.635 42.857 21.50 0.00 33.83 4.20
1943 2488 5.687285 CCAGCTTAACAAATGACAAGTGAAC 59.313 40.000 0.00 0.00 0.00 3.18
1944 2489 5.592282 TCCAGCTTAACAAATGACAAGTGAA 59.408 36.000 0.00 0.00 0.00 3.18
1982 2527 0.104855 TGGTGATGATCTGGTAGCGC 59.895 55.000 0.00 0.00 0.00 5.92
2012 2557 6.479006 GTCATCATCATGATTTATCCCCTCA 58.521 40.000 5.16 0.00 41.26 3.86
2055 2600 9.924650 GTACAGAAAGAGGACTAGATGTTTTTA 57.075 33.333 0.00 0.00 0.00 1.52
2059 2604 7.339976 GGTAGTACAGAAAGAGGACTAGATGTT 59.660 40.741 2.06 0.00 0.00 2.71
2075 2620 8.937835 TGTATGTATGTAGGTAGGTAGTACAGA 58.062 37.037 2.06 0.00 32.62 3.41
2095 2641 6.953101 TCCCAGTGTACAAATGTATGTATGT 58.047 36.000 0.00 0.00 38.03 2.29
2096 2642 7.047891 ACTCCCAGTGTACAAATGTATGTATG 58.952 38.462 0.00 0.00 38.03 2.39
2097 2643 7.195374 ACTCCCAGTGTACAAATGTATGTAT 57.805 36.000 0.00 0.00 38.03 2.29
2223 2772 1.606531 GGTCTGCCTCCTGATGCTT 59.393 57.895 0.00 0.00 0.00 3.91
2229 2778 2.363018 TCTCCGGTCTGCCTCCTG 60.363 66.667 0.00 0.00 0.00 3.86
2342 2894 5.754406 GGCGTGGTGTGTATGTATGTAATAA 59.246 40.000 0.00 0.00 0.00 1.40
2343 2895 5.291178 GGCGTGGTGTGTATGTATGTAATA 58.709 41.667 0.00 0.00 0.00 0.98
2344 2896 4.124238 GGCGTGGTGTGTATGTATGTAAT 58.876 43.478 0.00 0.00 0.00 1.89
2419 2985 4.641396 CCATGTAACCTCTCAAACACTGA 58.359 43.478 0.00 0.00 0.00 3.41
2537 3125 4.056092 TCACAATTGCTTGTTTGCATCA 57.944 36.364 5.05 0.00 43.05 3.07
2544 3132 5.924254 CACAGATCATTCACAATTGCTTGTT 59.076 36.000 5.05 0.00 43.05 2.83
2901 3556 1.537202 CAAGCAGTCCCCTTTCGAAAG 59.463 52.381 27.45 27.45 35.79 2.62
2933 3588 2.309528 TGCAGATTGATCACCGGTAC 57.690 50.000 6.87 2.29 0.00 3.34
3000 3657 2.293122 CGTGAGTCCATCATCTCTCCTC 59.707 54.545 0.00 0.00 40.92 3.71
3014 3671 1.004277 CCGTCTGTCTTGCGTGAGTC 61.004 60.000 0.00 0.00 0.00 3.36
3020 3682 1.934220 TAGCCTCCGTCTGTCTTGCG 61.934 60.000 0.00 0.00 0.00 4.85
3022 3684 2.969628 ATTAGCCTCCGTCTGTCTTG 57.030 50.000 0.00 0.00 0.00 3.02
3031 3693 9.843334 CTAGATTAGTTAACTAATTAGCCTCCG 57.157 37.037 31.65 18.38 46.07 4.63
3550 4252 7.872483 GGGCATTTATTTCAAATGATTACCGAT 59.128 33.333 12.62 0.00 39.36 4.18
3585 4287 2.039613 GGGCTAGCTAGAAGGATGCATT 59.960 50.000 25.15 0.00 0.00 3.56
3674 4376 3.728864 CGCTTGGAATGCTTATGTGTGTC 60.729 47.826 0.00 0.00 34.38 3.67
3734 4436 0.824109 CCTCCTCACCATCTACGCAA 59.176 55.000 0.00 0.00 0.00 4.85
3806 4508 8.425577 ACATATTCTTGTAGATTGCAGTGTAC 57.574 34.615 9.29 9.29 0.00 2.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.