Multiple sequence alignment - TraesCS7B01G376600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G376600 chr7B 100.000 3226 0 0 1 3226 641373460 641376685 0.000000e+00 5958.0
1 TraesCS7B01G376600 chr7B 81.143 1050 151 33 1059 2076 641603584 641604618 0.000000e+00 798.0
2 TraesCS7B01G376600 chr7B 86.100 741 87 12 1012 1739 641730375 641729638 0.000000e+00 784.0
3 TraesCS7B01G376600 chr7B 83.902 733 83 21 1344 2076 642063480 642062783 0.000000e+00 667.0
4 TraesCS7B01G376600 chr7B 78.150 865 86 48 1810 2646 641729636 641728847 3.790000e-124 455.0
5 TraesCS7B01G376600 chr7B 80.793 479 73 8 15 492 641738861 641738401 1.100000e-94 357.0
6 TraesCS7B01G376600 chr7B 86.897 290 31 2 1060 1349 642069020 642068738 5.190000e-83 318.0
7 TraesCS7B01G376600 chr7B 90.909 165 10 1 3049 3213 641694783 641694624 1.950000e-52 217.0
8 TraesCS7B01G376600 chr7B 89.076 119 7 4 2637 2755 641694894 641694782 3.350000e-30 143.0
9 TraesCS7B01G376600 chr7A 91.809 818 55 3 1088 1905 670171910 670172715 0.000000e+00 1129.0
10 TraesCS7B01G376600 chr7A 81.650 1030 158 20 1070 2076 670284110 670283089 0.000000e+00 826.0
11 TraesCS7B01G376600 chr7A 80.902 1042 155 24 1097 2102 670553771 670554804 0.000000e+00 782.0
12 TraesCS7B01G376600 chr7A 76.136 880 161 30 69 938 670169636 670170476 1.790000e-112 416.0
13 TraesCS7B01G376600 chr7A 92.281 285 22 0 1906 2190 670176863 670177147 3.880000e-109 405.0
14 TraesCS7B01G376600 chr7A 88.485 165 11 4 3049 3213 670177573 670177729 3.280000e-45 193.0
15 TraesCS7B01G376600 chr7A 79.402 301 25 18 2456 2755 670177312 670177576 9.200000e-41 178.0
16 TraesCS7B01G376600 chr7A 89.231 65 6 1 2345 2408 670282825 670282761 2.670000e-11 80.5
17 TraesCS7B01G376600 chr3D 91.299 747 46 9 1492 2236 55188631 55189360 0.000000e+00 1002.0
18 TraesCS7B01G376600 chr3D 88.834 403 34 8 1088 1490 55167869 55168260 4.840000e-133 484.0
19 TraesCS7B01G376600 chr3D 84.122 296 27 8 639 932 55167479 55167756 5.300000e-68 268.0
20 TraesCS7B01G376600 chr3D 79.487 312 29 15 2289 2599 55189601 55189878 4.250000e-44 189.0
21 TraesCS7B01G376600 chr3D 87.500 160 13 2 3054 3213 55189920 55190072 9.200000e-41 178.0
22 TraesCS7B01G376600 chr3D 77.500 240 29 15 449 687 55167266 55167481 1.570000e-23 121.0
23 TraesCS7B01G376600 chr7D 81.644 1095 157 18 1091 2163 577782246 577781174 0.000000e+00 869.0
24 TraesCS7B01G376600 chr7D 81.183 1031 164 20 1066 2076 578012181 578013201 0.000000e+00 802.0
25 TraesCS7B01G376600 chr7D 81.103 979 145 23 1131 2077 578467198 578468168 0.000000e+00 747.0
26 TraesCS7B01G376600 chr7D 80.241 582 78 25 1293 1859 578138886 578138327 1.390000e-108 403.0
27 TraesCS7B01G376600 chr7D 85.867 375 35 14 2387 2755 578013454 578013816 1.820000e-102 383.0
28 TraesCS7B01G376600 chr7D 95.349 43 2 0 3044 3086 578013808 578013850 5.770000e-08 69.4
29 TraesCS7B01G376600 chr6B 77.839 907 166 29 1191 2075 642998517 642999410 2.200000e-146 529.0
30 TraesCS7B01G376600 chr3B 81.702 235 34 5 2824 3049 644541535 644541301 1.530000e-43 187.0
31 TraesCS7B01G376600 chr2B 84.431 167 19 3 2824 2990 676751193 676751352 1.200000e-34 158.0
32 TraesCS7B01G376600 chr5D 80.892 157 23 5 2870 3025 438372747 438372897 2.030000e-22 117.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G376600 chr7B 641373460 641376685 3225 False 5958.000000 5958 100.000000 1 3226 1 chr7B.!!$F1 3225
1 TraesCS7B01G376600 chr7B 641603584 641604618 1034 False 798.000000 798 81.143000 1059 2076 1 chr7B.!!$F2 1017
2 TraesCS7B01G376600 chr7B 642062783 642063480 697 True 667.000000 667 83.902000 1344 2076 1 chr7B.!!$R2 732
3 TraesCS7B01G376600 chr7B 641728847 641730375 1528 True 619.500000 784 82.125000 1012 2646 2 chr7B.!!$R5 1634
4 TraesCS7B01G376600 chr7A 670553771 670554804 1033 False 782.000000 782 80.902000 1097 2102 1 chr7A.!!$F1 1005
5 TraesCS7B01G376600 chr7A 670169636 670172715 3079 False 772.500000 1129 83.972500 69 1905 2 chr7A.!!$F2 1836
6 TraesCS7B01G376600 chr7A 670282761 670284110 1349 True 453.250000 826 85.440500 1070 2408 2 chr7A.!!$R1 1338
7 TraesCS7B01G376600 chr7A 670176863 670177729 866 False 258.666667 405 86.722667 1906 3213 3 chr7A.!!$F3 1307
8 TraesCS7B01G376600 chr3D 55188631 55190072 1441 False 456.333333 1002 86.095333 1492 3213 3 chr3D.!!$F2 1721
9 TraesCS7B01G376600 chr3D 55167266 55168260 994 False 291.000000 484 83.485333 449 1490 3 chr3D.!!$F1 1041
10 TraesCS7B01G376600 chr7D 577781174 577782246 1072 True 869.000000 869 81.644000 1091 2163 1 chr7D.!!$R1 1072
11 TraesCS7B01G376600 chr7D 578467198 578468168 970 False 747.000000 747 81.103000 1131 2077 1 chr7D.!!$F1 946
12 TraesCS7B01G376600 chr7D 578012181 578013850 1669 False 418.133333 802 87.466333 1066 3086 3 chr7D.!!$F2 2020
13 TraesCS7B01G376600 chr7D 578138327 578138886 559 True 403.000000 403 80.241000 1293 1859 1 chr7D.!!$R2 566
14 TraesCS7B01G376600 chr6B 642998517 642999410 893 False 529.000000 529 77.839000 1191 2075 1 chr6B.!!$F1 884

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
278 279 0.179073 CCTCTCACGCGGGAAATGAT 60.179 55.0 14.25 0.0 0.00 2.45 F
363 364 0.241481 GTCCGGTCTGTCTGTCTGAC 59.759 60.0 0.00 0.0 45.54 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2102 3569 2.261671 CCGACGTCCTCCAGGTTG 59.738 66.667 10.58 0.0 36.34 3.77 R
2348 4050 1.463831 GCAGCAGTGACAAGAGTGATG 59.536 52.381 0.00 0.0 36.05 3.07 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 3.791539 CGCAGCAGACACATCCTC 58.208 61.111 0.00 0.00 0.00 3.71
25 26 1.079612 CGCAGCAGACACATCCTCA 60.080 57.895 0.00 0.00 0.00 3.86
26 27 0.461516 CGCAGCAGACACATCCTCAT 60.462 55.000 0.00 0.00 0.00 2.90
27 28 1.297664 GCAGCAGACACATCCTCATC 58.702 55.000 0.00 0.00 0.00 2.92
28 29 1.406477 GCAGCAGACACATCCTCATCA 60.406 52.381 0.00 0.00 0.00 3.07
29 30 2.938314 GCAGCAGACACATCCTCATCAA 60.938 50.000 0.00 0.00 0.00 2.57
30 31 3.542648 CAGCAGACACATCCTCATCAAT 58.457 45.455 0.00 0.00 0.00 2.57
31 32 3.312697 CAGCAGACACATCCTCATCAATG 59.687 47.826 0.00 0.00 0.00 2.82
32 33 3.054582 AGCAGACACATCCTCATCAATGT 60.055 43.478 0.00 0.00 36.56 2.71
33 34 3.311871 GCAGACACATCCTCATCAATGTC 59.688 47.826 0.00 0.00 33.92 3.06
34 35 3.875727 CAGACACATCCTCATCAATGTCC 59.124 47.826 0.00 0.00 37.72 4.02
35 36 3.520721 AGACACATCCTCATCAATGTCCA 59.479 43.478 0.00 0.00 37.72 4.02
36 37 3.614092 ACACATCCTCATCAATGTCCAC 58.386 45.455 0.00 0.00 33.92 4.02
37 38 3.009363 ACACATCCTCATCAATGTCCACA 59.991 43.478 0.00 0.00 33.92 4.17
38 39 4.011698 CACATCCTCATCAATGTCCACAA 58.988 43.478 0.00 0.00 33.92 3.33
39 40 4.012374 ACATCCTCATCAATGTCCACAAC 58.988 43.478 0.00 0.00 30.35 3.32
40 41 3.071874 TCCTCATCAATGTCCACAACC 57.928 47.619 0.00 0.00 0.00 3.77
41 42 2.644299 TCCTCATCAATGTCCACAACCT 59.356 45.455 0.00 0.00 0.00 3.50
42 43 3.843619 TCCTCATCAATGTCCACAACCTA 59.156 43.478 0.00 0.00 0.00 3.08
43 44 3.941483 CCTCATCAATGTCCACAACCTAC 59.059 47.826 0.00 0.00 0.00 3.18
44 45 4.323792 CCTCATCAATGTCCACAACCTACT 60.324 45.833 0.00 0.00 0.00 2.57
45 46 5.241403 TCATCAATGTCCACAACCTACTT 57.759 39.130 0.00 0.00 0.00 2.24
46 47 5.003160 TCATCAATGTCCACAACCTACTTG 58.997 41.667 0.00 0.00 35.77 3.16
47 48 4.698201 TCAATGTCCACAACCTACTTGA 57.302 40.909 0.00 0.00 33.59 3.02
48 49 4.385825 TCAATGTCCACAACCTACTTGAC 58.614 43.478 0.00 0.00 33.59 3.18
49 50 2.922740 TGTCCACAACCTACTTGACC 57.077 50.000 0.00 0.00 33.59 4.02
50 51 2.120312 TGTCCACAACCTACTTGACCA 58.880 47.619 0.00 0.00 33.59 4.02
51 52 2.104111 TGTCCACAACCTACTTGACCAG 59.896 50.000 0.00 0.00 33.59 4.00
52 53 2.367567 GTCCACAACCTACTTGACCAGA 59.632 50.000 0.00 0.00 33.59 3.86
53 54 3.042682 TCCACAACCTACTTGACCAGAA 58.957 45.455 0.00 0.00 33.59 3.02
54 55 3.139077 CCACAACCTACTTGACCAGAAC 58.861 50.000 0.00 0.00 33.59 3.01
55 56 3.181454 CCACAACCTACTTGACCAGAACT 60.181 47.826 0.00 0.00 33.59 3.01
56 57 4.451900 CACAACCTACTTGACCAGAACTT 58.548 43.478 0.00 0.00 33.59 2.66
57 58 4.511826 CACAACCTACTTGACCAGAACTTC 59.488 45.833 0.00 0.00 33.59 3.01
58 59 4.065789 CAACCTACTTGACCAGAACTTCC 58.934 47.826 0.00 0.00 30.42 3.46
59 60 2.638363 ACCTACTTGACCAGAACTTCCC 59.362 50.000 0.00 0.00 0.00 3.97
60 61 2.637872 CCTACTTGACCAGAACTTCCCA 59.362 50.000 0.00 0.00 0.00 4.37
61 62 3.264450 CCTACTTGACCAGAACTTCCCAT 59.736 47.826 0.00 0.00 0.00 4.00
62 63 3.425162 ACTTGACCAGAACTTCCCATC 57.575 47.619 0.00 0.00 0.00 3.51
63 64 2.040412 ACTTGACCAGAACTTCCCATCC 59.960 50.000 0.00 0.00 0.00 3.51
64 65 0.613260 TGACCAGAACTTCCCATCCG 59.387 55.000 0.00 0.00 0.00 4.18
65 66 0.744771 GACCAGAACTTCCCATCCGC 60.745 60.000 0.00 0.00 0.00 5.54
66 67 1.299648 CCAGAACTTCCCATCCGCA 59.700 57.895 0.00 0.00 0.00 5.69
67 68 1.026718 CCAGAACTTCCCATCCGCAC 61.027 60.000 0.00 0.00 0.00 5.34
77 78 1.372087 CCATCCGCACTGCTTCCTTC 61.372 60.000 0.00 0.00 0.00 3.46
78 79 0.674581 CATCCGCACTGCTTCCTTCA 60.675 55.000 0.00 0.00 0.00 3.02
82 83 1.016130 CGCACTGCTTCCTTCATCGT 61.016 55.000 0.00 0.00 0.00 3.73
85 86 1.734465 CACTGCTTCCTTCATCGTTCC 59.266 52.381 0.00 0.00 0.00 3.62
88 89 1.351017 TGCTTCCTTCATCGTTCCCTT 59.649 47.619 0.00 0.00 0.00 3.95
89 90 2.010497 GCTTCCTTCATCGTTCCCTTC 58.990 52.381 0.00 0.00 0.00 3.46
90 91 2.271800 CTTCCTTCATCGTTCCCTTCG 58.728 52.381 0.00 0.00 0.00 3.79
96 97 3.366739 ATCGTTCCCTTCGGGCGAC 62.367 63.158 4.20 0.00 43.94 5.19
102 103 2.506438 CCTTCGGGCGACGTTCTC 60.506 66.667 0.00 0.00 44.69 2.87
105 106 3.909258 TTCGGGCGACGTTCTCTGC 62.909 63.158 0.00 0.00 44.69 4.26
123 124 1.751927 CCTTGCAGCTCATCCCCAC 60.752 63.158 0.00 0.00 0.00 4.61
147 148 2.203209 GACCCCCATGGACGATGC 60.203 66.667 15.22 0.00 38.00 3.91
148 149 2.692368 ACCCCCATGGACGATGCT 60.692 61.111 15.22 0.00 38.00 3.79
149 150 2.203252 CCCCCATGGACGATGCTG 60.203 66.667 15.22 0.00 35.39 4.41
152 153 1.689243 CCCCATGGACGATGCTGAGA 61.689 60.000 15.22 0.00 0.00 3.27
161 162 1.269465 ACGATGCTGAGACATCATCCG 60.269 52.381 14.16 6.13 45.56 4.18
164 165 1.185315 TGCTGAGACATCATCCGTGA 58.815 50.000 0.00 0.00 39.04 4.35
174 175 1.815003 CATCCGTGATGGCGCTGAA 60.815 57.895 7.64 0.00 36.51 3.02
209 210 1.202580 GCGATGACATCTAGGGCAGTT 60.203 52.381 13.45 0.00 0.00 3.16
210 211 2.477825 CGATGACATCTAGGGCAGTTG 58.522 52.381 13.45 0.00 0.00 3.16
216 217 1.770658 CATCTAGGGCAGTTGATGGGA 59.229 52.381 0.00 0.00 34.40 4.37
222 223 3.197790 CAGTTGATGGGAGCGGCG 61.198 66.667 0.51 0.51 0.00 6.46
223 224 4.473520 AGTTGATGGGAGCGGCGG 62.474 66.667 9.78 0.00 0.00 6.13
241 242 3.204827 CGCGGATGGGGAAGCAAG 61.205 66.667 0.00 0.00 0.00 4.01
246 247 1.691219 GATGGGGAAGCAAGGGTGA 59.309 57.895 0.00 0.00 0.00 4.02
255 256 2.742372 CAAGGGTGAAGGACGGCG 60.742 66.667 4.80 4.80 0.00 6.46
256 257 4.016706 AAGGGTGAAGGACGGCGG 62.017 66.667 13.24 0.00 0.00 6.13
275 276 1.079127 CACCTCTCACGCGGGAAAT 60.079 57.895 14.25 0.00 0.00 2.17
276 277 1.079127 ACCTCTCACGCGGGAAATG 60.079 57.895 14.25 5.76 0.00 2.32
278 279 0.179073 CCTCTCACGCGGGAAATGAT 60.179 55.000 14.25 0.00 0.00 2.45
280 281 0.461870 TCTCACGCGGGAAATGATGG 60.462 55.000 14.25 0.00 0.00 3.51
284 285 0.744414 ACGCGGGAAATGATGGACAG 60.744 55.000 12.47 0.00 0.00 3.51
285 286 0.461870 CGCGGGAAATGATGGACAGA 60.462 55.000 0.00 0.00 0.00 3.41
287 288 1.678728 GCGGGAAATGATGGACAGACA 60.679 52.381 0.00 0.00 0.00 3.41
289 290 2.009774 GGGAAATGATGGACAGACACG 58.990 52.381 0.00 0.00 0.00 4.49
291 292 3.334691 GGAAATGATGGACAGACACGAA 58.665 45.455 0.00 0.00 0.00 3.85
296 297 2.029020 TGATGGACAGACACGAAAGGAG 60.029 50.000 0.00 0.00 0.00 3.69
298 299 0.966920 GGACAGACACGAAAGGAGGA 59.033 55.000 0.00 0.00 0.00 3.71
299 300 1.336980 GGACAGACACGAAAGGAGGAC 60.337 57.143 0.00 0.00 0.00 3.85
302 303 1.737008 GACACGAAAGGAGGACGGC 60.737 63.158 0.00 0.00 0.00 5.68
309 310 0.676782 AAAGGAGGACGGCGGATTTG 60.677 55.000 13.24 0.00 0.00 2.32
310 311 1.550130 AAGGAGGACGGCGGATTTGA 61.550 55.000 13.24 0.00 0.00 2.69
315 316 1.436983 GGACGGCGGATTTGATGGAC 61.437 60.000 13.24 0.00 0.00 4.02
326 327 5.356751 CGGATTTGATGGACTTGGTCAATTA 59.643 40.000 0.14 0.00 33.68 1.40
328 329 6.183360 GGATTTGATGGACTTGGTCAATTAGG 60.183 42.308 0.14 0.00 33.68 2.69
338 339 7.255801 GGACTTGGTCAATTAGGTGAAATTTGA 60.256 37.037 0.00 0.00 33.68 2.69
341 342 6.074648 TGGTCAATTAGGTGAAATTTGAGGT 58.925 36.000 0.00 0.00 0.00 3.85
346 347 2.876581 AGGTGAAATTTGAGGTGGGTC 58.123 47.619 0.00 0.00 0.00 4.46
359 360 1.906824 TGGGTCCGGTCTGTCTGTC 60.907 63.158 0.00 0.00 0.00 3.51
360 361 1.606889 GGGTCCGGTCTGTCTGTCT 60.607 63.158 0.00 0.00 0.00 3.41
361 362 1.587054 GGTCCGGTCTGTCTGTCTG 59.413 63.158 0.00 0.00 0.00 3.51
362 363 0.894184 GGTCCGGTCTGTCTGTCTGA 60.894 60.000 0.00 0.00 0.00 3.27
363 364 0.241481 GTCCGGTCTGTCTGTCTGAC 59.759 60.000 0.00 0.00 45.54 3.51
372 373 2.740055 CTGTCTGACGTGGCAGGC 60.740 66.667 7.17 0.00 40.82 4.85
373 374 4.662961 TGTCTGACGTGGCAGGCG 62.663 66.667 7.17 0.94 43.28 5.52
392 393 3.992317 GCCCGGACCTCGCCTATC 61.992 72.222 0.73 0.00 37.59 2.08
393 394 3.303928 CCCGGACCTCGCCTATCC 61.304 72.222 0.73 0.00 37.59 2.59
396 397 3.992317 GGACCTCGCCTATCCGCC 61.992 72.222 0.00 0.00 0.00 6.13
404 407 1.214673 TCGCCTATCCGCCCTAGATAT 59.785 52.381 0.00 0.00 0.00 1.63
406 409 1.689273 GCCTATCCGCCCTAGATATGG 59.311 57.143 0.00 0.00 0.00 2.74
415 418 1.211457 CCCTAGATATGGGCTGGATGC 59.789 57.143 0.00 0.00 37.99 3.91
416 419 1.134580 CCTAGATATGGGCTGGATGCG 60.135 57.143 0.00 0.00 44.05 4.73
419 422 1.002868 ATATGGGCTGGATGCGAGC 60.003 57.895 0.00 0.00 44.05 5.03
426 429 3.647649 CTGGATGCGAGCGGTGTCA 62.648 63.158 0.00 0.00 0.00 3.58
427 430 2.434185 GGATGCGAGCGGTGTCAA 60.434 61.111 0.00 0.00 0.00 3.18
429 432 1.349627 GATGCGAGCGGTGTCAATG 59.650 57.895 0.00 0.00 0.00 2.82
434 437 1.016130 CGAGCGGTGTCAATGAGCTT 61.016 55.000 0.00 0.00 38.39 3.74
435 438 0.723981 GAGCGGTGTCAATGAGCTTC 59.276 55.000 0.00 0.00 38.39 3.86
445 448 6.209361 GTGTCAATGAGCTTCGACATATAGA 58.791 40.000 10.40 0.00 40.27 1.98
446 449 6.697455 GTGTCAATGAGCTTCGACATATAGAA 59.303 38.462 10.40 0.00 40.27 2.10
447 450 7.383572 GTGTCAATGAGCTTCGACATATAGAAT 59.616 37.037 10.40 0.00 40.27 2.40
460 463 5.611374 ACATATAGAATCGGTTTGAGGGTG 58.389 41.667 0.00 0.00 0.00 4.61
468 471 3.565214 TTTGAGGGTGCGGCTGGA 61.565 61.111 0.00 0.00 0.00 3.86
485 488 2.073056 TGGATCGTGATTTTGTGACCG 58.927 47.619 0.00 0.00 0.00 4.79
499 502 1.248785 TGACCGGTCACTGTCTAGGC 61.249 60.000 33.23 3.65 34.14 3.93
505 508 1.076014 TCACTGTCTAGGCCGTCCA 59.924 57.895 0.00 0.00 33.74 4.02
508 511 1.682684 CTGTCTAGGCCGTCCACCT 60.683 63.158 0.00 0.00 41.57 4.00
529 532 2.124411 AGACGTATAGGGGGCATTTGT 58.876 47.619 0.00 0.00 0.00 2.83
538 541 4.102113 GGCATTTGTGGAGCCTGT 57.898 55.556 0.00 0.00 44.92 4.00
540 543 0.895100 GGCATTTGTGGAGCCTGTCA 60.895 55.000 0.00 0.00 44.92 3.58
541 544 1.180029 GCATTTGTGGAGCCTGTCAT 58.820 50.000 0.00 0.00 0.00 3.06
544 547 3.181493 GCATTTGTGGAGCCTGTCATTAG 60.181 47.826 0.00 0.00 0.00 1.73
545 548 4.264253 CATTTGTGGAGCCTGTCATTAGA 58.736 43.478 0.00 0.00 0.00 2.10
546 549 4.365514 TTTGTGGAGCCTGTCATTAGAA 57.634 40.909 0.00 0.00 0.00 2.10
547 550 3.616956 TGTGGAGCCTGTCATTAGAAG 57.383 47.619 0.00 0.00 0.00 2.85
548 551 2.284190 GTGGAGCCTGTCATTAGAAGC 58.716 52.381 0.00 0.00 0.00 3.86
549 552 2.093235 GTGGAGCCTGTCATTAGAAGCT 60.093 50.000 0.00 0.00 31.72 3.74
571 574 5.028549 TGATGCTCTAAGAAGACCCATTC 57.971 43.478 0.00 0.00 0.00 2.67
575 578 1.136305 TCTAAGAAGACCCATTCGCCG 59.864 52.381 0.00 0.00 34.27 6.46
629 632 5.461407 CACACACGGATCATCTCTTCATAAG 59.539 44.000 0.00 0.00 0.00 1.73
632 635 6.199908 CACACGGATCATCTCTTCATAAGTTC 59.800 42.308 0.00 0.00 0.00 3.01
633 636 6.097554 ACACGGATCATCTCTTCATAAGTTCT 59.902 38.462 0.00 0.00 0.00 3.01
710 759 5.751028 CGCTTCCCTTTTTGAATGTACAAAA 59.249 36.000 0.00 0.00 44.42 2.44
725 774 6.452494 TGTACAAAATTTTCGGGAGTTCAA 57.548 33.333 0.00 0.00 0.00 2.69
743 792 3.286353 TCAAACATGTCTGGAAGCACAA 58.714 40.909 0.00 0.00 30.15 3.33
744 793 3.066621 TCAAACATGTCTGGAAGCACAAC 59.933 43.478 0.00 0.00 30.15 3.32
774 823 9.935682 ATGTTCGTTTGCTGATATTATTAACAG 57.064 29.630 0.00 0.00 32.81 3.16
806 855 9.970395 ATGTATGACCAATGCATTATAAAGTTG 57.030 29.630 12.53 0.00 38.32 3.16
810 859 8.984891 TGACCAATGCATTATAAAGTTGAAAG 57.015 30.769 12.53 0.00 0.00 2.62
823 872 6.607735 AAAGTTGAAAGTTCCAATGCATTG 57.392 33.333 28.91 28.91 37.52 2.82
859 908 5.830991 TGTGGTCACCTTTAGCTAAATTTGT 59.169 36.000 18.93 13.33 0.00 2.83
881 931 6.631962 TGTACACTTTTAAAACAGGTTTGGG 58.368 36.000 0.00 0.00 32.36 4.12
897 947 7.147302 ACAGGTTTGGGCTAATTAGTCTCATAT 60.147 37.037 16.35 0.00 0.00 1.78
899 949 8.376270 AGGTTTGGGCTAATTAGTCTCATATAC 58.624 37.037 16.35 10.85 0.00 1.47
932 984 2.911102 GCGCACTGAGATTGCTTAAAAC 59.089 45.455 0.30 0.00 37.87 2.43
938 990 6.642131 GCACTGAGATTGCTTAAAACAAATCA 59.358 34.615 0.00 3.17 37.00 2.57
940 992 8.697067 CACTGAGATTGCTTAAAACAAATCAAG 58.303 33.333 0.00 0.00 30.87 3.02
942 994 9.897744 CTGAGATTGCTTAAAACAAATCAAGTA 57.102 29.630 0.00 0.00 30.87 2.24
945 997 9.899226 AGATTGCTTAAAACAAATCAAGTAGAC 57.101 29.630 0.00 0.00 0.00 2.59
946 998 9.899226 GATTGCTTAAAACAAATCAAGTAGACT 57.101 29.630 0.00 0.00 0.00 3.24
967 1178 8.089115 AGACTACTAACTGAAATTGAGCAAAC 57.911 34.615 0.00 0.00 0.00 2.93
976 1187 6.864685 ACTGAAATTGAGCAAACATGTGTATG 59.135 34.615 0.00 0.21 40.24 2.39
980 1191 8.692110 AAATTGAGCAAACATGTGTATGTATG 57.308 30.769 0.00 0.00 46.54 2.39
983 1194 3.065233 AGCAAACATGTGTATGTATGGCG 59.935 43.478 0.00 0.00 46.54 5.69
984 1195 3.181501 GCAAACATGTGTATGTATGGCGT 60.182 43.478 0.00 0.00 46.54 5.68
985 1196 4.674101 GCAAACATGTGTATGTATGGCGTT 60.674 41.667 0.00 0.00 46.54 4.84
989 1200 4.570772 ACATGTGTATGTATGGCGTTCTTC 59.429 41.667 0.00 0.00 45.45 2.87
990 1201 4.465632 TGTGTATGTATGGCGTTCTTCT 57.534 40.909 0.00 0.00 0.00 2.85
991 1202 5.585820 TGTGTATGTATGGCGTTCTTCTA 57.414 39.130 0.00 0.00 0.00 2.10
992 1203 5.968254 TGTGTATGTATGGCGTTCTTCTAA 58.032 37.500 0.00 0.00 0.00 2.10
993 1204 6.399743 TGTGTATGTATGGCGTTCTTCTAAA 58.600 36.000 0.00 0.00 0.00 1.85
994 1205 6.874664 TGTGTATGTATGGCGTTCTTCTAAAA 59.125 34.615 0.00 0.00 0.00 1.52
995 1206 7.388224 TGTGTATGTATGGCGTTCTTCTAAAAA 59.612 33.333 0.00 0.00 0.00 1.94
1054 2411 0.813821 GTCCATCCCTTTGCTTGAGC 59.186 55.000 0.00 0.00 42.50 4.26
1056 2413 1.101331 CCATCCCTTTGCTTGAGCTC 58.899 55.000 6.82 6.82 42.66 4.09
1057 2414 1.101331 CATCCCTTTGCTTGAGCTCC 58.899 55.000 12.15 0.00 42.66 4.70
1058 2415 0.998145 ATCCCTTTGCTTGAGCTCCT 59.002 50.000 12.15 0.00 42.66 3.69
1083 2453 0.460635 CTCTCTTCCTCAGCAGCAGC 60.461 60.000 0.00 0.00 42.56 5.25
1086 2456 1.745864 CTTCCTCAGCAGCAGCCAG 60.746 63.158 0.00 0.00 43.56 4.85
1087 2457 3.914579 TTCCTCAGCAGCAGCCAGC 62.915 63.158 0.00 0.00 43.56 4.85
1157 2535 4.545706 CTTGGGCTCGCCGGCATA 62.546 66.667 28.98 13.24 40.61 3.14
1172 2550 1.668419 GCATATGCCGTGAGACCTTT 58.332 50.000 17.26 0.00 34.31 3.11
1174 2552 2.632377 CATATGCCGTGAGACCTTTGT 58.368 47.619 0.00 0.00 0.00 2.83
1286 2683 4.135153 GCCTTCCTCTCTCGCGCA 62.135 66.667 8.75 0.00 0.00 6.09
2213 3718 7.706281 CTAACTGAGCTAGTATGTCCAATTG 57.294 40.000 0.00 0.00 39.18 2.32
2232 3738 9.300681 TCCAATTGATCCATGGTAGAATTAATC 57.699 33.333 12.58 5.26 35.66 1.75
2236 3742 7.392766 TGATCCATGGTAGAATTAATCAGGT 57.607 36.000 12.58 0.00 0.00 4.00
2237 3743 8.504811 TGATCCATGGTAGAATTAATCAGGTA 57.495 34.615 12.58 0.00 0.00 3.08
2238 3744 8.375506 TGATCCATGGTAGAATTAATCAGGTAC 58.624 37.037 12.58 0.00 0.00 3.34
2239 3745 7.074653 TCCATGGTAGAATTAATCAGGTACC 57.925 40.000 12.58 2.73 30.58 3.34
2246 3752 8.931568 GGTAGAATTAATCAGGTACCTTCCTAA 58.068 37.037 13.15 9.98 35.87 2.69
2272 3805 1.689984 TCTTGGACACTTTGCATGCA 58.310 45.000 18.46 18.46 0.00 3.96
2274 3807 2.629137 TCTTGGACACTTTGCATGCATT 59.371 40.909 23.37 6.15 0.00 3.56
2275 3808 2.728690 TGGACACTTTGCATGCATTC 57.271 45.000 23.37 12.45 0.00 2.67
2276 3809 2.241160 TGGACACTTTGCATGCATTCT 58.759 42.857 23.37 3.24 0.00 2.40
2277 3810 2.629137 TGGACACTTTGCATGCATTCTT 59.371 40.909 23.37 5.06 0.00 2.52
2317 4019 9.678941 TGATCGAGTATGATTATTGTTGAGTAC 57.321 33.333 0.00 0.00 0.00 2.73
2318 4020 9.130312 GATCGAGTATGATTATTGTTGAGTACC 57.870 37.037 0.00 0.00 0.00 3.34
2331 4033 3.719268 TGAGTACCTTGGATGTGCATT 57.281 42.857 0.00 0.00 0.00 3.56
2333 4035 4.009675 TGAGTACCTTGGATGTGCATTTC 58.990 43.478 0.00 0.00 0.00 2.17
2334 4036 3.356290 AGTACCTTGGATGTGCATTTCC 58.644 45.455 10.20 10.20 0.00 3.13
2348 4050 4.567959 GTGCATTTCCATTGGATAAACTGC 59.432 41.667 6.15 9.36 0.00 4.40
2366 4068 1.071228 TGCATCACTCTTGTCACTGCT 59.929 47.619 0.00 0.00 0.00 4.24
2368 4070 1.463831 CATCACTCTTGTCACTGCTGC 59.536 52.381 0.00 0.00 0.00 5.25
2369 4071 0.250038 TCACTCTTGTCACTGCTGCC 60.250 55.000 0.00 0.00 0.00 4.85
2425 4141 9.944376 ATTTCTTCTTGCAATTCTACTAGTACA 57.056 29.630 0.00 0.00 0.00 2.90
2428 4144 8.585881 TCTTCTTGCAATTCTACTAGTACAACT 58.414 33.333 0.00 0.00 0.00 3.16
2429 4145 9.856488 CTTCTTGCAATTCTACTAGTACAACTA 57.144 33.333 0.00 0.00 0.00 2.24
2498 4226 2.923020 CGCACAAATTATGGCCTTCAAC 59.077 45.455 3.32 0.00 0.00 3.18
2549 4282 5.682943 TGTTTCAAGTACTCAAATTCCCG 57.317 39.130 0.00 0.00 0.00 5.14
2558 4291 5.826208 AGTACTCAAATTCCCGAAAACAACT 59.174 36.000 0.00 0.00 0.00 3.16
2559 4292 5.592104 ACTCAAATTCCCGAAAACAACTT 57.408 34.783 0.00 0.00 0.00 2.66
2560 4293 5.588240 ACTCAAATTCCCGAAAACAACTTC 58.412 37.500 0.00 0.00 0.00 3.01
2601 4339 6.542821 AGAAATGATAGGAACTTGTTGGACA 58.457 36.000 0.00 0.00 41.75 4.02
2632 4370 9.897744 CATGAACAAGTAGCAGAATTTCTAAAA 57.102 29.630 0.00 0.00 0.00 1.52
2634 4372 9.120538 TGAACAAGTAGCAGAATTTCTAAAAGT 57.879 29.630 0.00 0.00 0.00 2.66
2635 4373 9.387123 GAACAAGTAGCAGAATTTCTAAAAGTG 57.613 33.333 0.00 0.00 0.00 3.16
2706 4444 9.016623 CAAACTTGCACAGAAATGATATATGTG 57.983 33.333 0.00 0.00 43.18 3.21
2707 4445 8.510243 AACTTGCACAGAAATGATATATGTGA 57.490 30.769 7.75 0.00 43.02 3.58
2708 4446 8.510243 ACTTGCACAGAAATGATATATGTGAA 57.490 30.769 7.75 0.00 43.02 3.18
2709 4447 8.400947 ACTTGCACAGAAATGATATATGTGAAC 58.599 33.333 7.75 0.00 43.02 3.18
2711 4449 8.510243 TGCACAGAAATGATATATGTGAACTT 57.490 30.769 7.75 0.00 43.02 2.66
2712 4450 8.400186 TGCACAGAAATGATATATGTGAACTTG 58.600 33.333 7.75 0.00 43.02 3.16
2713 4451 8.400947 GCACAGAAATGATATATGTGAACTTGT 58.599 33.333 7.75 0.00 43.02 3.16
2719 4457 5.445069 TGATATATGTGAACTTGTTGGGGG 58.555 41.667 0.00 0.00 0.00 5.40
2752 4490 3.341823 ACTTGGAGCTGCATTGTCTAAG 58.658 45.455 9.39 3.83 35.52 2.18
2753 4491 3.008375 ACTTGGAGCTGCATTGTCTAAGA 59.992 43.478 9.39 0.00 34.05 2.10
2754 4492 3.257469 TGGAGCTGCATTGTCTAAGAG 57.743 47.619 2.72 0.00 0.00 2.85
2755 4493 1.939255 GGAGCTGCATTGTCTAAGAGC 59.061 52.381 0.00 0.00 0.00 4.09
2756 4494 2.625737 GAGCTGCATTGTCTAAGAGCA 58.374 47.619 1.02 0.00 32.23 4.26
2757 4495 3.204526 GAGCTGCATTGTCTAAGAGCAT 58.795 45.455 1.02 0.00 32.58 3.79
2758 4496 3.204526 AGCTGCATTGTCTAAGAGCATC 58.795 45.455 1.02 0.00 32.58 3.91
2774 4512 1.153086 ATCTCCAACAGATGCGGGC 60.153 57.895 0.00 0.00 40.71 6.13
2775 4513 1.630126 ATCTCCAACAGATGCGGGCT 61.630 55.000 0.00 0.00 40.71 5.19
2776 4514 0.975556 TCTCCAACAGATGCGGGCTA 60.976 55.000 0.00 0.00 0.00 3.93
2777 4515 0.531532 CTCCAACAGATGCGGGCTAG 60.532 60.000 0.00 0.00 0.00 3.42
2778 4516 2.182842 CCAACAGATGCGGGCTAGC 61.183 63.158 6.04 6.04 37.71 3.42
2794 4532 4.737601 GCACGACGCGCTAATTTT 57.262 50.000 5.73 0.00 0.00 1.82
2795 4533 2.995938 GCACGACGCGCTAATTTTT 58.004 47.368 5.73 0.00 0.00 1.94
2827 4565 4.014847 GCTGAAATAGCGTTATTGCACA 57.985 40.909 8.50 7.38 43.63 4.57
2828 4566 4.411327 GCTGAAATAGCGTTATTGCACAA 58.589 39.130 8.50 0.00 43.63 3.33
2829 4567 4.856487 GCTGAAATAGCGTTATTGCACAAA 59.144 37.500 8.50 0.00 43.63 2.83
2830 4568 5.344665 GCTGAAATAGCGTTATTGCACAAAA 59.655 36.000 8.50 0.00 43.63 2.44
2831 4569 6.128956 GCTGAAATAGCGTTATTGCACAAAAA 60.129 34.615 8.50 0.00 43.63 1.94
2832 4570 7.099666 TGAAATAGCGTTATTGCACAAAAAC 57.900 32.000 8.50 0.00 31.17 2.43
2833 4571 6.697455 TGAAATAGCGTTATTGCACAAAAACA 59.303 30.769 8.50 0.00 31.17 2.83
2834 4572 6.446659 AATAGCGTTATTGCACAAAAACAC 57.553 33.333 3.50 0.00 37.31 3.32
2835 4573 3.775202 AGCGTTATTGCACAAAAACACA 58.225 36.364 0.00 0.00 37.31 3.72
2836 4574 3.796178 AGCGTTATTGCACAAAAACACAG 59.204 39.130 0.00 0.00 37.31 3.66
2837 4575 3.601360 GCGTTATTGCACAAAAACACAGC 60.601 43.478 0.00 0.00 34.15 4.40
2838 4576 3.360574 CGTTATTGCACAAAAACACAGCG 60.361 43.478 0.00 0.00 0.00 5.18
2839 4577 0.929615 ATTGCACAAAAACACAGCGC 59.070 45.000 0.00 0.00 0.00 5.92
2840 4578 1.080995 TTGCACAAAAACACAGCGCC 61.081 50.000 2.29 0.00 0.00 6.53
2841 4579 2.237066 GCACAAAAACACAGCGCCC 61.237 57.895 2.29 0.00 0.00 6.13
2842 4580 1.140589 CACAAAAACACAGCGCCCA 59.859 52.632 2.29 0.00 0.00 5.36
2843 4581 0.459237 CACAAAAACACAGCGCCCAA 60.459 50.000 2.29 0.00 0.00 4.12
2844 4582 0.459411 ACAAAAACACAGCGCCCAAC 60.459 50.000 2.29 0.00 0.00 3.77
2845 4583 1.142965 AAAAACACAGCGCCCAACC 59.857 52.632 2.29 0.00 0.00 3.77
2846 4584 2.304901 AAAAACACAGCGCCCAACCC 62.305 55.000 2.29 0.00 0.00 4.11
2864 4602 3.747976 GACGGCCCCACATGCAAC 61.748 66.667 0.00 0.00 0.00 4.17
2865 4603 4.284550 ACGGCCCCACATGCAACT 62.285 61.111 0.00 0.00 0.00 3.16
2866 4604 3.751246 CGGCCCCACATGCAACTG 61.751 66.667 0.00 0.00 0.00 3.16
2867 4605 4.073200 GGCCCCACATGCAACTGC 62.073 66.667 0.00 0.00 42.50 4.40
2868 4606 4.073200 GCCCCACATGCAACTGCC 62.073 66.667 0.00 0.00 41.18 4.85
2869 4607 3.384532 CCCCACATGCAACTGCCC 61.385 66.667 0.00 0.00 41.18 5.36
2870 4608 2.601067 CCCACATGCAACTGCCCA 60.601 61.111 0.00 0.00 41.18 5.36
2871 4609 2.652530 CCACATGCAACTGCCCAC 59.347 61.111 0.00 0.00 41.18 4.61
2872 4610 2.256158 CACATGCAACTGCCCACG 59.744 61.111 0.00 0.00 41.18 4.94
2873 4611 3.673484 ACATGCAACTGCCCACGC 61.673 61.111 0.00 0.00 41.18 5.34
2874 4612 4.764336 CATGCAACTGCCCACGCG 62.764 66.667 3.53 3.53 41.18 6.01
2893 4631 4.947147 ACAAGCCGGCGCCTCAAA 62.947 61.111 26.68 0.00 34.57 2.69
2894 4632 3.443045 CAAGCCGGCGCCTCAAAT 61.443 61.111 26.68 3.59 34.57 2.32
2895 4633 2.676471 AAGCCGGCGCCTCAAATT 60.676 55.556 26.68 9.12 34.57 1.82
2896 4634 2.275380 AAGCCGGCGCCTCAAATTT 61.275 52.632 26.68 2.87 34.57 1.82
2897 4635 2.490993 AAGCCGGCGCCTCAAATTTG 62.491 55.000 26.68 12.15 34.57 2.32
2898 4636 2.506881 CCGGCGCCTCAAATTTGC 60.507 61.111 26.68 1.00 0.00 3.68
2899 4637 2.257980 CGGCGCCTCAAATTTGCA 59.742 55.556 26.68 2.12 0.00 4.08
2900 4638 1.372748 CGGCGCCTCAAATTTGCAA 60.373 52.632 26.68 0.00 0.00 4.08
2901 4639 1.616872 CGGCGCCTCAAATTTGCAAC 61.617 55.000 26.68 3.98 0.00 4.17
2902 4640 1.291184 GGCGCCTCAAATTTGCAACC 61.291 55.000 22.15 6.56 0.00 3.77
2903 4641 0.319813 GCGCCTCAAATTTGCAACCT 60.320 50.000 13.54 0.00 0.00 3.50
2904 4642 1.701704 CGCCTCAAATTTGCAACCTC 58.298 50.000 13.54 0.00 0.00 3.85
2905 4643 1.701704 GCCTCAAATTTGCAACCTCG 58.298 50.000 13.54 0.00 0.00 4.63
2906 4644 1.701704 CCTCAAATTTGCAACCTCGC 58.298 50.000 13.54 0.00 0.00 5.03
2907 4645 1.000385 CCTCAAATTTGCAACCTCGCA 60.000 47.619 13.54 0.00 41.03 5.10
2908 4646 2.322161 CTCAAATTTGCAACCTCGCAG 58.678 47.619 13.54 0.00 44.14 5.18
2909 4647 0.785979 CAAATTTGCAACCTCGCAGC 59.214 50.000 5.01 0.00 44.14 5.25
2910 4648 0.319813 AAATTTGCAACCTCGCAGCC 60.320 50.000 0.00 0.00 44.14 4.85
2911 4649 2.158561 AATTTGCAACCTCGCAGCCC 62.159 55.000 0.00 0.00 44.14 5.19
2925 4663 4.174129 GCCCGCGTGCGCTAAATT 62.174 61.111 9.73 0.00 39.32 1.82
2926 4664 2.483288 CCCGCGTGCGCTAAATTT 59.517 55.556 9.73 0.00 39.32 1.82
2927 4665 1.867373 CCCGCGTGCGCTAAATTTG 60.867 57.895 9.73 0.00 39.32 2.32
2928 4666 2.496257 CCGCGTGCGCTAAATTTGC 61.496 57.895 9.73 1.91 39.32 3.68
2929 4667 1.795569 CGCGTGCGCTAAATTTGCA 60.796 52.632 9.73 0.00 39.32 4.08
2930 4668 1.723115 CGCGTGCGCTAAATTTGCAG 61.723 55.000 9.73 0.00 39.67 4.41
2931 4669 0.454285 GCGTGCGCTAAATTTGCAGA 60.454 50.000 9.73 0.00 39.67 4.26
2932 4670 1.795162 GCGTGCGCTAAATTTGCAGAT 60.795 47.619 9.73 0.00 39.67 2.90
2933 4671 2.518949 CGTGCGCTAAATTTGCAGATT 58.481 42.857 9.73 0.00 39.67 2.40
2934 4672 2.527487 CGTGCGCTAAATTTGCAGATTC 59.473 45.455 9.73 0.00 39.67 2.52
2935 4673 2.527487 GTGCGCTAAATTTGCAGATTCG 59.473 45.455 9.73 4.27 39.67 3.34
2936 4674 2.161410 TGCGCTAAATTTGCAGATTCGT 59.839 40.909 9.73 0.00 34.03 3.85
2937 4675 3.171277 GCGCTAAATTTGCAGATTCGTT 58.829 40.909 2.51 0.00 0.00 3.85
2938 4676 3.608073 GCGCTAAATTTGCAGATTCGTTT 59.392 39.130 2.51 0.00 0.00 3.60
2939 4677 4.089923 GCGCTAAATTTGCAGATTCGTTTT 59.910 37.500 2.51 0.00 0.00 2.43
2940 4678 5.388371 GCGCTAAATTTGCAGATTCGTTTTT 60.388 36.000 2.51 0.00 0.00 1.94
2941 4679 6.002911 CGCTAAATTTGCAGATTCGTTTTTG 58.997 36.000 2.51 0.00 0.00 2.44
2942 4680 6.345723 CGCTAAATTTGCAGATTCGTTTTTGT 60.346 34.615 2.51 0.00 0.00 2.83
2943 4681 6.787043 GCTAAATTTGCAGATTCGTTTTTGTG 59.213 34.615 2.51 0.00 0.00 3.33
2944 4682 6.660887 AAATTTGCAGATTCGTTTTTGTGT 57.339 29.167 2.51 0.00 0.00 3.72
2945 4683 5.640218 ATTTGCAGATTCGTTTTTGTGTG 57.360 34.783 0.00 0.00 0.00 3.82
2946 4684 3.773860 TGCAGATTCGTTTTTGTGTGT 57.226 38.095 0.00 0.00 0.00 3.72
2947 4685 3.433709 TGCAGATTCGTTTTTGTGTGTG 58.566 40.909 0.00 0.00 0.00 3.82
2948 4686 2.216263 GCAGATTCGTTTTTGTGTGTGC 59.784 45.455 0.00 0.00 0.00 4.57
2949 4687 3.694734 CAGATTCGTTTTTGTGTGTGCT 58.305 40.909 0.00 0.00 0.00 4.40
2950 4688 3.725740 CAGATTCGTTTTTGTGTGTGCTC 59.274 43.478 0.00 0.00 0.00 4.26
2951 4689 3.627577 AGATTCGTTTTTGTGTGTGCTCT 59.372 39.130 0.00 0.00 0.00 4.09
2952 4690 4.814234 AGATTCGTTTTTGTGTGTGCTCTA 59.186 37.500 0.00 0.00 0.00 2.43
2953 4691 5.470098 AGATTCGTTTTTGTGTGTGCTCTAT 59.530 36.000 0.00 0.00 0.00 1.98
2954 4692 5.493133 TTCGTTTTTGTGTGTGCTCTATT 57.507 34.783 0.00 0.00 0.00 1.73
2955 4693 5.493133 TCGTTTTTGTGTGTGCTCTATTT 57.507 34.783 0.00 0.00 0.00 1.40
2956 4694 5.885881 TCGTTTTTGTGTGTGCTCTATTTT 58.114 33.333 0.00 0.00 0.00 1.82
2957 4695 7.017498 TCGTTTTTGTGTGTGCTCTATTTTA 57.983 32.000 0.00 0.00 0.00 1.52
2958 4696 6.908284 TCGTTTTTGTGTGTGCTCTATTTTAC 59.092 34.615 0.00 0.00 0.00 2.01
2959 4697 6.689241 CGTTTTTGTGTGTGCTCTATTTTACA 59.311 34.615 0.00 0.00 0.00 2.41
2960 4698 7.219154 CGTTTTTGTGTGTGCTCTATTTTACAA 59.781 33.333 0.00 0.00 0.00 2.41
2961 4699 7.979115 TTTTGTGTGTGCTCTATTTTACAAC 57.021 32.000 0.00 0.00 0.00 3.32
2962 4700 6.935741 TTGTGTGTGCTCTATTTTACAACT 57.064 33.333 0.00 0.00 0.00 3.16
2963 4701 8.439993 TTTGTGTGTGCTCTATTTTACAACTA 57.560 30.769 0.00 0.00 0.00 2.24
2964 4702 7.416154 TGTGTGTGCTCTATTTTACAACTAC 57.584 36.000 0.00 0.00 0.00 2.73
2965 4703 7.214381 TGTGTGTGCTCTATTTTACAACTACT 58.786 34.615 0.00 0.00 0.00 2.57
2966 4704 7.170828 TGTGTGTGCTCTATTTTACAACTACTG 59.829 37.037 0.00 0.00 0.00 2.74
2967 4705 7.170998 GTGTGTGCTCTATTTTACAACTACTGT 59.829 37.037 0.00 0.00 42.47 3.55
2968 4706 7.713507 TGTGTGCTCTATTTTACAACTACTGTT 59.286 33.333 0.00 0.00 39.64 3.16
2979 4717 3.611766 AACTACTGTTGGAGCGCTATT 57.388 42.857 11.50 0.00 34.71 1.73
2980 4718 3.611766 ACTACTGTTGGAGCGCTATTT 57.388 42.857 11.50 0.00 0.00 1.40
2981 4719 3.939066 ACTACTGTTGGAGCGCTATTTT 58.061 40.909 11.50 0.00 0.00 1.82
2982 4720 4.324267 ACTACTGTTGGAGCGCTATTTTT 58.676 39.130 11.50 0.00 0.00 1.94
2983 4721 3.559238 ACTGTTGGAGCGCTATTTTTG 57.441 42.857 11.50 2.28 0.00 2.44
2984 4722 3.146066 ACTGTTGGAGCGCTATTTTTGA 58.854 40.909 11.50 0.00 0.00 2.69
2985 4723 3.758554 ACTGTTGGAGCGCTATTTTTGAT 59.241 39.130 11.50 0.00 0.00 2.57
2986 4724 4.142600 ACTGTTGGAGCGCTATTTTTGATC 60.143 41.667 11.50 0.00 0.00 2.92
2987 4725 3.181511 TGTTGGAGCGCTATTTTTGATCG 60.182 43.478 11.50 0.00 0.00 3.69
2988 4726 1.330521 TGGAGCGCTATTTTTGATCGC 59.669 47.619 11.50 0.00 45.34 4.58
2991 4729 3.507523 CGCTATTTTTGATCGCGCA 57.492 47.368 8.75 0.00 37.29 6.09
2992 4730 1.104579 CGCTATTTTTGATCGCGCAC 58.895 50.000 8.75 0.00 37.29 5.34
2993 4731 1.104579 GCTATTTTTGATCGCGCACG 58.895 50.000 8.75 0.00 42.01 5.34
2994 4732 1.104579 CTATTTTTGATCGCGCACGC 58.895 50.000 8.75 4.64 39.84 5.34
3005 4743 3.419759 CGCACGCGCCTACCTTTT 61.420 61.111 5.73 0.00 33.11 2.27
3006 4744 2.479198 GCACGCGCCTACCTTTTC 59.521 61.111 5.73 0.00 0.00 2.29
3007 4745 2.322081 GCACGCGCCTACCTTTTCA 61.322 57.895 5.73 0.00 0.00 2.69
3008 4746 1.787847 CACGCGCCTACCTTTTCAG 59.212 57.895 5.73 0.00 0.00 3.02
3009 4747 2.033194 ACGCGCCTACCTTTTCAGC 61.033 57.895 5.73 0.00 0.00 4.26
3011 4749 2.785258 CGCCTACCTTTTCAGCGC 59.215 61.111 0.00 0.00 40.35 5.92
3012 4750 2.785258 GCCTACCTTTTCAGCGCG 59.215 61.111 0.00 0.00 0.00 6.86
3013 4751 2.785258 CCTACCTTTTCAGCGCGC 59.215 61.111 26.66 26.66 0.00 6.86
3014 4752 2.395690 CTACCTTTTCAGCGCGCG 59.604 61.111 28.44 28.44 0.00 6.86
3015 4753 3.083600 CTACCTTTTCAGCGCGCGG 62.084 63.158 33.06 26.50 0.00 6.46
3025 4763 4.164252 GCGCGCGGCTTATATAGT 57.836 55.556 33.06 0.00 39.11 2.12
3026 4764 1.702299 GCGCGCGGCTTATATAGTG 59.298 57.895 33.06 0.00 39.11 2.74
3027 4765 1.702299 CGCGCGGCTTATATAGTGC 59.298 57.895 24.84 2.36 36.83 4.40
3028 4766 1.006825 CGCGCGGCTTATATAGTGCA 61.007 55.000 24.84 0.00 39.78 4.57
3029 4767 1.359848 GCGCGGCTTATATAGTGCAT 58.640 50.000 8.83 0.00 39.60 3.96
3030 4768 1.324736 GCGCGGCTTATATAGTGCATC 59.675 52.381 8.83 0.00 39.60 3.91
3031 4769 2.881074 CGCGGCTTATATAGTGCATCT 58.119 47.619 0.00 0.00 0.00 2.90
3032 4770 2.600420 CGCGGCTTATATAGTGCATCTG 59.400 50.000 0.00 1.62 0.00 2.90
3033 4771 3.589988 GCGGCTTATATAGTGCATCTGT 58.410 45.455 10.57 0.00 0.00 3.41
3034 4772 3.997021 GCGGCTTATATAGTGCATCTGTT 59.003 43.478 10.57 0.00 0.00 3.16
3035 4773 4.143030 GCGGCTTATATAGTGCATCTGTTG 60.143 45.833 10.57 0.00 0.00 3.33
3036 4774 5.230182 CGGCTTATATAGTGCATCTGTTGA 58.770 41.667 10.57 0.00 0.00 3.18
3037 4775 5.696270 CGGCTTATATAGTGCATCTGTTGAA 59.304 40.000 10.57 0.00 0.00 2.69
3038 4776 6.128715 CGGCTTATATAGTGCATCTGTTGAAG 60.129 42.308 10.57 0.00 0.00 3.02
3039 4777 6.931281 GGCTTATATAGTGCATCTGTTGAAGA 59.069 38.462 10.57 0.00 39.94 2.87
3159 4899 3.149196 ACTGCAATTACCCTTGTGACTG 58.851 45.455 0.00 0.00 0.00 3.51
3173 4913 3.076621 TGTGACTGTCAATTGATGGAGC 58.923 45.455 12.81 0.00 0.00 4.70
3174 4914 2.094894 GTGACTGTCAATTGATGGAGCG 59.905 50.000 12.81 0.00 0.00 5.03
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 3.503363 GATGTGTCTGCTGCGCCC 61.503 66.667 4.18 0.00 0.00 6.13
5 6 3.503363 GGATGTGTCTGCTGCGCC 61.503 66.667 4.18 0.00 0.00 6.53
6 7 2.435586 AGGATGTGTCTGCTGCGC 60.436 61.111 0.00 0.00 0.00 6.09
7 8 0.461516 ATGAGGATGTGTCTGCTGCG 60.462 55.000 0.00 0.00 0.00 5.18
8 9 1.297664 GATGAGGATGTGTCTGCTGC 58.702 55.000 0.00 0.00 0.00 5.25
9 10 2.685850 TGATGAGGATGTGTCTGCTG 57.314 50.000 0.00 0.00 0.00 4.41
10 11 3.054582 ACATTGATGAGGATGTGTCTGCT 60.055 43.478 0.00 0.00 35.31 4.24
11 12 3.276857 ACATTGATGAGGATGTGTCTGC 58.723 45.455 0.00 0.00 35.31 4.26
12 13 3.875727 GGACATTGATGAGGATGTGTCTG 59.124 47.826 0.00 0.00 36.67 3.51
13 14 3.520721 TGGACATTGATGAGGATGTGTCT 59.479 43.478 0.00 0.00 36.67 3.41
14 15 3.624861 GTGGACATTGATGAGGATGTGTC 59.375 47.826 0.00 0.00 36.67 3.67
15 16 3.009363 TGTGGACATTGATGAGGATGTGT 59.991 43.478 0.00 0.00 36.67 3.72
16 17 3.613030 TGTGGACATTGATGAGGATGTG 58.387 45.455 0.00 0.00 36.67 3.21
17 18 4.012374 GTTGTGGACATTGATGAGGATGT 58.988 43.478 0.00 0.00 39.09 3.06
18 19 3.379372 GGTTGTGGACATTGATGAGGATG 59.621 47.826 0.00 0.00 0.00 3.51
19 20 3.267812 AGGTTGTGGACATTGATGAGGAT 59.732 43.478 0.00 0.00 0.00 3.24
20 21 2.644299 AGGTTGTGGACATTGATGAGGA 59.356 45.455 0.00 0.00 0.00 3.71
21 22 3.077484 AGGTTGTGGACATTGATGAGG 57.923 47.619 0.00 0.00 0.00 3.86
22 23 4.836825 AGTAGGTTGTGGACATTGATGAG 58.163 43.478 0.00 0.00 0.00 2.90
23 24 4.908601 AGTAGGTTGTGGACATTGATGA 57.091 40.909 0.00 0.00 0.00 2.92
24 25 5.003160 TCAAGTAGGTTGTGGACATTGATG 58.997 41.667 0.00 0.00 37.43 3.07
25 26 5.003804 GTCAAGTAGGTTGTGGACATTGAT 58.996 41.667 0.00 0.00 37.43 2.57
26 27 4.385825 GTCAAGTAGGTTGTGGACATTGA 58.614 43.478 0.00 0.00 37.43 2.57
27 28 3.502211 GGTCAAGTAGGTTGTGGACATTG 59.498 47.826 0.00 0.00 37.43 2.82
28 29 3.137544 TGGTCAAGTAGGTTGTGGACATT 59.862 43.478 0.00 0.00 37.43 2.71
29 30 2.708861 TGGTCAAGTAGGTTGTGGACAT 59.291 45.455 0.00 0.00 37.43 3.06
30 31 2.104111 CTGGTCAAGTAGGTTGTGGACA 59.896 50.000 0.00 0.00 37.43 4.02
31 32 2.367567 TCTGGTCAAGTAGGTTGTGGAC 59.632 50.000 0.00 0.00 37.43 4.02
32 33 2.684943 TCTGGTCAAGTAGGTTGTGGA 58.315 47.619 0.00 0.00 37.43 4.02
33 34 3.139077 GTTCTGGTCAAGTAGGTTGTGG 58.861 50.000 0.00 0.00 37.43 4.17
34 35 4.073293 AGTTCTGGTCAAGTAGGTTGTG 57.927 45.455 0.00 0.00 37.43 3.33
35 36 4.444449 GGAAGTTCTGGTCAAGTAGGTTGT 60.444 45.833 2.25 0.00 37.43 3.32
36 37 4.065789 GGAAGTTCTGGTCAAGTAGGTTG 58.934 47.826 2.25 0.00 37.52 3.77
37 38 3.072622 GGGAAGTTCTGGTCAAGTAGGTT 59.927 47.826 2.25 0.00 0.00 3.50
38 39 2.638363 GGGAAGTTCTGGTCAAGTAGGT 59.362 50.000 2.25 0.00 0.00 3.08
39 40 2.637872 TGGGAAGTTCTGGTCAAGTAGG 59.362 50.000 2.25 0.00 0.00 3.18
40 41 4.508662 GATGGGAAGTTCTGGTCAAGTAG 58.491 47.826 2.25 0.00 0.00 2.57
41 42 3.263425 GGATGGGAAGTTCTGGTCAAGTA 59.737 47.826 2.25 0.00 0.00 2.24
42 43 2.040412 GGATGGGAAGTTCTGGTCAAGT 59.960 50.000 2.25 0.00 0.00 3.16
43 44 2.716217 GGATGGGAAGTTCTGGTCAAG 58.284 52.381 2.25 0.00 0.00 3.02
44 45 1.003118 CGGATGGGAAGTTCTGGTCAA 59.997 52.381 2.25 0.00 0.00 3.18
45 46 0.613260 CGGATGGGAAGTTCTGGTCA 59.387 55.000 2.25 0.00 0.00 4.02
46 47 0.744771 GCGGATGGGAAGTTCTGGTC 60.745 60.000 2.25 0.00 0.00 4.02
47 48 1.299976 GCGGATGGGAAGTTCTGGT 59.700 57.895 2.25 0.00 0.00 4.00
48 49 1.026718 GTGCGGATGGGAAGTTCTGG 61.027 60.000 2.25 0.00 0.00 3.86
49 50 0.036010 AGTGCGGATGGGAAGTTCTG 60.036 55.000 2.25 0.00 0.00 3.02
50 51 0.036010 CAGTGCGGATGGGAAGTTCT 60.036 55.000 2.25 0.00 0.00 3.01
51 52 1.648467 GCAGTGCGGATGGGAAGTTC 61.648 60.000 0.00 0.00 0.00 3.01
52 53 1.675641 GCAGTGCGGATGGGAAGTT 60.676 57.895 0.00 0.00 0.00 2.66
53 54 2.045926 GCAGTGCGGATGGGAAGT 60.046 61.111 0.00 0.00 0.00 3.01
54 55 1.372087 GAAGCAGTGCGGATGGGAAG 61.372 60.000 10.00 0.00 0.00 3.46
55 56 1.377202 GAAGCAGTGCGGATGGGAA 60.377 57.895 10.00 0.00 0.00 3.97
56 57 2.268920 GAAGCAGTGCGGATGGGA 59.731 61.111 10.00 0.00 0.00 4.37
57 58 2.825836 GGAAGCAGTGCGGATGGG 60.826 66.667 10.00 0.00 0.00 4.00
58 59 1.372087 GAAGGAAGCAGTGCGGATGG 61.372 60.000 10.00 0.00 0.00 3.51
59 60 0.674581 TGAAGGAAGCAGTGCGGATG 60.675 55.000 10.00 0.00 0.00 3.51
60 61 0.254178 ATGAAGGAAGCAGTGCGGAT 59.746 50.000 10.00 0.00 0.00 4.18
61 62 0.391661 GATGAAGGAAGCAGTGCGGA 60.392 55.000 10.00 0.00 0.00 5.54
62 63 1.699656 CGATGAAGGAAGCAGTGCGG 61.700 60.000 10.00 0.00 0.00 5.69
63 64 1.016130 ACGATGAAGGAAGCAGTGCG 61.016 55.000 10.00 0.00 0.00 5.34
64 65 1.129437 GAACGATGAAGGAAGCAGTGC 59.871 52.381 7.13 7.13 0.00 4.40
65 66 1.734465 GGAACGATGAAGGAAGCAGTG 59.266 52.381 0.00 0.00 0.00 3.66
66 67 1.339151 GGGAACGATGAAGGAAGCAGT 60.339 52.381 0.00 0.00 0.00 4.40
67 68 1.065854 AGGGAACGATGAAGGAAGCAG 60.066 52.381 0.00 0.00 0.00 4.24
88 89 4.415332 GCAGAGAACGTCGCCCGA 62.415 66.667 0.00 0.00 40.70 5.14
90 91 3.591254 AAGGCAGAGAACGTCGCCC 62.591 63.158 8.68 0.00 42.49 6.13
105 106 1.751927 GTGGGGATGAGCTGCAAGG 60.752 63.158 1.02 0.00 0.00 3.61
106 107 2.110967 CGTGGGGATGAGCTGCAAG 61.111 63.158 1.02 0.00 0.00 4.01
134 135 0.531532 GTCTCAGCATCGTCCATGGG 60.532 60.000 13.02 0.00 32.37 4.00
161 162 3.512516 GCCCTTCAGCGCCATCAC 61.513 66.667 2.29 0.00 0.00 3.06
169 170 2.437895 GTTACCCCGCCCTTCAGC 60.438 66.667 0.00 0.00 0.00 4.26
170 171 2.271173 GGTTACCCCGCCCTTCAG 59.729 66.667 0.00 0.00 0.00 3.02
185 186 1.464376 CCCTAGATGTCATCGCCGGT 61.464 60.000 1.90 0.00 0.00 5.28
187 188 1.373497 GCCCTAGATGTCATCGCCG 60.373 63.158 7.18 0.45 0.00 6.46
188 189 0.320247 CTGCCCTAGATGTCATCGCC 60.320 60.000 7.18 0.00 0.00 5.54
190 191 2.101415 TCAACTGCCCTAGATGTCATCG 59.899 50.000 7.18 0.00 31.62 3.84
232 233 0.609406 GTCCTTCACCCTTGCTTCCC 60.609 60.000 0.00 0.00 0.00 3.97
234 235 0.955919 CCGTCCTTCACCCTTGCTTC 60.956 60.000 0.00 0.00 0.00 3.86
261 262 0.461870 CCATCATTTCCCGCGTGAGA 60.462 55.000 4.92 0.00 0.00 3.27
262 263 0.461870 TCCATCATTTCCCGCGTGAG 60.462 55.000 4.92 0.00 0.00 3.51
263 264 0.742990 GTCCATCATTTCCCGCGTGA 60.743 55.000 4.92 1.27 0.00 4.35
264 265 1.024046 TGTCCATCATTTCCCGCGTG 61.024 55.000 4.92 0.00 0.00 5.34
266 267 0.461870 TCTGTCCATCATTTCCCGCG 60.462 55.000 0.00 0.00 0.00 6.46
271 272 4.142816 CCTTTCGTGTCTGTCCATCATTTC 60.143 45.833 0.00 0.00 0.00 2.17
275 276 1.967779 TCCTTTCGTGTCTGTCCATCA 59.032 47.619 0.00 0.00 0.00 3.07
276 277 2.611518 CTCCTTTCGTGTCTGTCCATC 58.388 52.381 0.00 0.00 0.00 3.51
278 279 0.679505 CCTCCTTTCGTGTCTGTCCA 59.320 55.000 0.00 0.00 0.00 4.02
280 281 1.666311 CGTCCTCCTTTCGTGTCTGTC 60.666 57.143 0.00 0.00 0.00 3.51
284 285 1.737008 GCCGTCCTCCTTTCGTGTC 60.737 63.158 0.00 0.00 0.00 3.67
285 286 2.342648 GCCGTCCTCCTTTCGTGT 59.657 61.111 0.00 0.00 0.00 4.49
287 288 4.065281 CCGCCGTCCTCCTTTCGT 62.065 66.667 0.00 0.00 0.00 3.85
289 290 0.392595 AAATCCGCCGTCCTCCTTTC 60.393 55.000 0.00 0.00 0.00 2.62
291 292 1.078426 CAAATCCGCCGTCCTCCTT 60.078 57.895 0.00 0.00 0.00 3.36
296 297 1.153249 TCCATCAAATCCGCCGTCC 60.153 57.895 0.00 0.00 0.00 4.79
298 299 0.035439 AAGTCCATCAAATCCGCCGT 60.035 50.000 0.00 0.00 0.00 5.68
299 300 0.378257 CAAGTCCATCAAATCCGCCG 59.622 55.000 0.00 0.00 0.00 6.46
302 303 2.710377 TGACCAAGTCCATCAAATCCG 58.290 47.619 0.00 0.00 0.00 4.18
309 310 4.843728 TCACCTAATTGACCAAGTCCATC 58.156 43.478 0.00 0.00 0.00 3.51
310 311 4.927267 TCACCTAATTGACCAAGTCCAT 57.073 40.909 0.00 0.00 0.00 3.41
315 316 7.092716 CCTCAAATTTCACCTAATTGACCAAG 58.907 38.462 0.00 0.00 0.00 3.61
326 327 2.490902 GGACCCACCTCAAATTTCACCT 60.491 50.000 0.00 0.00 35.41 4.00
328 329 1.539827 CGGACCCACCTCAAATTTCAC 59.460 52.381 0.00 0.00 36.31 3.18
338 339 2.603776 GACAGACCGGACCCACCT 60.604 66.667 9.46 0.00 36.31 4.00
341 342 1.906824 GACAGACAGACCGGACCCA 60.907 63.158 9.46 0.00 0.00 4.51
375 376 3.992317 GATAGGCGAGGTCCGGGC 61.992 72.222 0.00 0.00 39.04 6.13
376 377 3.303928 GGATAGGCGAGGTCCGGG 61.304 72.222 0.00 0.00 39.04 5.73
379 380 3.992317 GGCGGATAGGCGAGGTCC 61.992 72.222 0.00 0.00 35.04 4.46
386 387 1.689273 CCATATCTAGGGCGGATAGGC 59.311 57.143 0.00 0.00 45.91 3.93
396 397 1.134580 CGCATCCAGCCCATATCTAGG 60.135 57.143 0.00 0.00 41.38 3.02
410 413 1.815421 ATTGACACCGCTCGCATCC 60.815 57.895 0.00 0.00 0.00 3.51
414 417 3.084579 CTCATTGACACCGCTCGC 58.915 61.111 0.00 0.00 0.00 5.03
415 418 1.016130 AAGCTCATTGACACCGCTCG 61.016 55.000 0.00 0.00 0.00 5.03
416 419 0.723981 GAAGCTCATTGACACCGCTC 59.276 55.000 0.00 0.00 0.00 5.03
419 422 0.716108 GTCGAAGCTCATTGACACCG 59.284 55.000 1.50 0.00 0.00 4.94
426 429 6.096036 CCGATTCTATATGTCGAAGCTCATT 58.904 40.000 0.00 0.00 37.55 2.57
427 430 5.184096 ACCGATTCTATATGTCGAAGCTCAT 59.816 40.000 0.00 0.00 37.55 2.90
429 432 5.049398 ACCGATTCTATATGTCGAAGCTC 57.951 43.478 0.00 0.00 37.55 4.09
434 437 5.278808 CCCTCAAACCGATTCTATATGTCGA 60.279 44.000 0.00 0.00 37.55 4.20
435 438 4.923871 CCCTCAAACCGATTCTATATGTCG 59.076 45.833 0.00 0.00 35.29 4.35
445 448 1.674322 CCGCACCCTCAAACCGATT 60.674 57.895 0.00 0.00 0.00 3.34
446 449 2.046314 CCGCACCCTCAAACCGAT 60.046 61.111 0.00 0.00 0.00 4.18
460 463 0.248215 CAAAATCACGATCCAGCCGC 60.248 55.000 0.00 0.00 0.00 6.53
468 471 2.073816 GACCGGTCACAAAATCACGAT 58.926 47.619 29.75 0.00 0.00 3.73
485 488 1.511768 GACGGCCTAGACAGTGACC 59.488 63.158 0.00 0.00 0.00 4.02
505 508 0.855598 TGCCCCCTATACGTCTAGGT 59.144 55.000 21.67 0.00 37.20 3.08
508 511 3.070446 CACAAATGCCCCCTATACGTCTA 59.930 47.826 0.00 0.00 0.00 2.59
529 532 2.093288 CAGCTTCTAATGACAGGCTCCA 60.093 50.000 0.00 0.00 0.00 3.86
566 569 2.031157 GTCATATTTTCCCGGCGAATGG 60.031 50.000 9.30 0.09 0.00 3.16
571 574 1.374560 TGTGTCATATTTTCCCGGCG 58.625 50.000 0.00 0.00 0.00 6.46
575 578 4.277476 TGGTCCATGTGTCATATTTTCCC 58.723 43.478 0.00 0.00 0.00 3.97
582 585 5.547276 TGATCCATATGGTCCATGTGTCATA 59.453 40.000 22.85 9.34 32.36 2.15
629 632 5.931441 AAGCATAGACAAAGTGACAGAAC 57.069 39.130 0.00 0.00 0.00 3.01
632 635 6.304356 TCAAAAGCATAGACAAAGTGACAG 57.696 37.500 0.00 0.00 0.00 3.51
633 636 6.486320 TGATCAAAAGCATAGACAAAGTGACA 59.514 34.615 0.00 0.00 0.00 3.58
693 742 8.821894 TCCCGAAAATTTTGTACATTCAAAAAG 58.178 29.630 8.47 0.00 45.87 2.27
710 759 4.827284 AGACATGTTTGAACTCCCGAAAAT 59.173 37.500 0.00 0.00 0.00 1.82
725 774 2.620115 CTGTTGTGCTTCCAGACATGTT 59.380 45.455 0.00 0.00 0.00 2.71
743 792 6.500684 AATATCAGCAAACGAACATTCTGT 57.499 33.333 0.00 0.00 0.00 3.41
771 820 8.696043 ATGCATTGGTCATACATAAATACTGT 57.304 30.769 0.00 0.00 0.00 3.55
786 835 8.986477 ACTTTCAACTTTATAATGCATTGGTC 57.014 30.769 22.27 0.00 0.00 4.02
806 855 5.984926 TCAACTTCAATGCATTGGAACTTTC 59.015 36.000 33.22 0.00 38.30 2.62
810 859 6.601741 TTTTCAACTTCAATGCATTGGAAC 57.398 33.333 33.22 0.00 38.30 3.62
823 872 5.262588 AGGTGACCACAATTTTCAACTTC 57.737 39.130 3.63 0.00 33.33 3.01
859 908 5.422650 AGCCCAAACCTGTTTTAAAAGTGTA 59.577 36.000 0.00 0.00 0.00 2.90
868 917 6.075315 AGACTAATTAGCCCAAACCTGTTTT 58.925 36.000 12.54 0.00 0.00 2.43
897 947 7.916914 TCTCAGTGCGCTACTATTATATGTA 57.083 36.000 9.73 0.00 37.60 2.29
899 949 7.253917 GCAATCTCAGTGCGCTACTATTATATG 60.254 40.741 9.73 7.49 37.60 1.78
938 990 8.585881 TGCTCAATTTCAGTTAGTAGTCTACTT 58.414 33.333 17.59 0.00 40.14 2.24
940 992 8.758633 TTGCTCAATTTCAGTTAGTAGTCTAC 57.241 34.615 1.39 1.39 0.00 2.59
942 994 7.715249 TGTTTGCTCAATTTCAGTTAGTAGTCT 59.285 33.333 0.00 0.00 0.00 3.24
944 996 7.801716 TGTTTGCTCAATTTCAGTTAGTAGT 57.198 32.000 0.00 0.00 0.00 2.73
945 997 8.292448 ACATGTTTGCTCAATTTCAGTTAGTAG 58.708 33.333 0.00 0.00 0.00 2.57
946 998 8.075574 CACATGTTTGCTCAATTTCAGTTAGTA 58.924 33.333 0.00 0.00 0.00 1.82
948 1000 6.919662 ACACATGTTTGCTCAATTTCAGTTAG 59.080 34.615 0.00 0.00 0.00 2.34
952 1163 6.864685 ACATACACATGTTTGCTCAATTTCAG 59.135 34.615 0.00 0.00 42.98 3.02
967 1178 4.811024 AGAAGAACGCCATACATACACATG 59.189 41.667 0.00 0.00 38.21 3.21
992 1203 3.500680 CGCGGCCCTATATACACATTTTT 59.499 43.478 0.00 0.00 0.00 1.94
993 1204 3.071479 CGCGGCCCTATATACACATTTT 58.929 45.455 0.00 0.00 0.00 1.82
994 1205 2.038033 ACGCGGCCCTATATACACATTT 59.962 45.455 12.47 0.00 0.00 2.32
995 1206 1.621814 ACGCGGCCCTATATACACATT 59.378 47.619 12.47 0.00 0.00 2.71
996 1207 1.067142 CACGCGGCCCTATATACACAT 60.067 52.381 12.47 0.00 0.00 3.21
997 1208 0.315886 CACGCGGCCCTATATACACA 59.684 55.000 12.47 0.00 0.00 3.72
998 1209 0.316204 ACACGCGGCCCTATATACAC 59.684 55.000 12.47 0.00 0.00 2.90
999 1210 0.315886 CACACGCGGCCCTATATACA 59.684 55.000 12.47 0.00 0.00 2.29
1000 1211 1.012486 GCACACGCGGCCCTATATAC 61.012 60.000 12.47 0.00 0.00 1.47
1001 1212 1.290955 GCACACGCGGCCCTATATA 59.709 57.895 12.47 0.00 0.00 0.86
1002 1213 2.030562 GCACACGCGGCCCTATAT 59.969 61.111 12.47 0.00 0.00 0.86
1003 1214 4.230002 GGCACACGCGGCCCTATA 62.230 66.667 12.47 0.00 45.87 1.31
1009 1220 3.660111 AGAAAAGGCACACGCGGC 61.660 61.111 12.47 3.70 39.92 6.53
1010 1221 2.058829 AACAGAAAAGGCACACGCGG 62.059 55.000 12.47 1.27 39.92 6.46
1054 2411 2.509548 TGAGGAAGAGAGAGGAGAGGAG 59.490 54.545 0.00 0.00 0.00 3.69
1056 2413 2.936202 CTGAGGAAGAGAGAGGAGAGG 58.064 57.143 0.00 0.00 0.00 3.69
1057 2414 2.301346 GCTGAGGAAGAGAGAGGAGAG 58.699 57.143 0.00 0.00 0.00 3.20
1058 2415 1.638070 TGCTGAGGAAGAGAGAGGAGA 59.362 52.381 0.00 0.00 0.00 3.71
1157 2535 3.233355 GACAAAGGTCTCACGGCAT 57.767 52.632 0.00 0.00 40.99 4.40
1172 2550 4.812476 CGGGCGCGGATGAAGACA 62.812 66.667 16.41 0.00 0.00 3.41
1556 2980 3.741476 CGCCAGCCAACCTTGAGC 61.741 66.667 0.00 0.00 0.00 4.26
1557 2981 3.741476 GCGCCAGCCAACCTTGAG 61.741 66.667 0.00 0.00 37.42 3.02
2102 3569 2.261671 CCGACGTCCTCCAGGTTG 59.738 66.667 10.58 0.00 36.34 3.77
2193 3696 5.931146 GGATCAATTGGACATACTAGCTCAG 59.069 44.000 5.42 0.00 0.00 3.35
2195 3698 5.858381 TGGATCAATTGGACATACTAGCTC 58.142 41.667 5.42 0.00 0.00 4.09
2197 3700 5.413833 CCATGGATCAATTGGACATACTAGC 59.586 44.000 5.56 0.00 31.94 3.42
2198 3701 6.537355 ACCATGGATCAATTGGACATACTAG 58.463 40.000 21.47 0.00 34.52 2.57
2199 3702 6.514012 ACCATGGATCAATTGGACATACTA 57.486 37.500 21.47 0.00 34.52 1.82
2202 3705 6.762077 TCTACCATGGATCAATTGGACATA 57.238 37.500 21.47 0.00 34.52 2.29
2203 3706 5.651612 TCTACCATGGATCAATTGGACAT 57.348 39.130 21.47 5.23 34.52 3.06
2213 3718 7.824779 GGTACCTGATTAATTCTACCATGGATC 59.175 40.741 21.47 8.80 0.00 3.36
2232 3738 5.731591 AGATTTTCGTTAGGAAGGTACCTG 58.268 41.667 17.14 0.30 40.81 4.00
2236 3742 6.168389 GTCCAAGATTTTCGTTAGGAAGGTA 58.832 40.000 0.00 0.00 35.70 3.08
2237 3743 5.001874 GTCCAAGATTTTCGTTAGGAAGGT 58.998 41.667 0.00 0.00 35.70 3.50
2238 3744 5.001232 TGTCCAAGATTTTCGTTAGGAAGG 58.999 41.667 0.00 0.00 35.70 3.46
2239 3745 5.701290 AGTGTCCAAGATTTTCGTTAGGAAG 59.299 40.000 0.00 0.00 35.70 3.46
2246 3752 3.380004 TGCAAAGTGTCCAAGATTTTCGT 59.620 39.130 0.00 0.00 0.00 3.85
2331 4033 5.263599 AGTGATGCAGTTTATCCAATGGAA 58.736 37.500 5.89 0.00 34.34 3.53
2333 4035 4.885907 AGAGTGATGCAGTTTATCCAATGG 59.114 41.667 0.00 0.00 0.00 3.16
2334 4036 6.127814 ACAAGAGTGATGCAGTTTATCCAATG 60.128 38.462 0.00 0.00 0.00 2.82
2348 4050 1.463831 GCAGCAGTGACAAGAGTGATG 59.536 52.381 0.00 0.00 36.05 3.07
2368 4070 1.404583 GGCTTGGTTTGCTGCATAAGG 60.405 52.381 1.84 0.00 0.00 2.69
2369 4071 1.273048 TGGCTTGGTTTGCTGCATAAG 59.727 47.619 1.84 7.53 0.00 1.73
2421 4137 9.947669 ACTCATCTGACGTTATAATAGTTGTAC 57.052 33.333 0.00 0.00 0.00 2.90
2425 4141 6.924060 GGCACTCATCTGACGTTATAATAGTT 59.076 38.462 0.00 0.00 0.00 2.24
2428 4144 6.399639 TGGCACTCATCTGACGTTATAATA 57.600 37.500 0.00 0.00 0.00 0.98
2429 4145 5.276461 TGGCACTCATCTGACGTTATAAT 57.724 39.130 0.00 0.00 0.00 1.28
2430 4146 4.729227 TGGCACTCATCTGACGTTATAA 57.271 40.909 0.00 0.00 0.00 0.98
2431 4147 4.340950 TCATGGCACTCATCTGACGTTATA 59.659 41.667 0.00 0.00 32.92 0.98
2432 4148 3.132824 TCATGGCACTCATCTGACGTTAT 59.867 43.478 0.00 0.00 32.92 1.89
2436 4152 2.133553 GATCATGGCACTCATCTGACG 58.866 52.381 0.00 0.00 32.92 4.35
2446 4162 3.498774 ATCTTGGTAGGATCATGGCAC 57.501 47.619 0.00 0.00 0.00 5.01
2485 4213 5.514500 AACTAAGGAGTTGAAGGCCATAA 57.486 39.130 5.01 0.00 44.50 1.90
2489 4217 7.933215 TTTTATAACTAAGGAGTTGAAGGCC 57.067 36.000 0.00 0.00 45.74 5.19
2520 4251 9.636965 GAATTTGAGTACTTGAAACAAAAATGC 57.363 29.630 9.84 0.00 34.86 3.56
2526 4259 5.823570 TCGGGAATTTGAGTACTTGAAACAA 59.176 36.000 0.00 0.00 0.00 2.83
2527 4260 5.369833 TCGGGAATTTGAGTACTTGAAACA 58.630 37.500 0.00 0.00 0.00 2.83
2532 4265 6.067263 TGTTTTCGGGAATTTGAGTACTTG 57.933 37.500 0.00 0.00 0.00 3.16
2549 4282 3.618698 GCACGGAGAAGAAGTTGTTTTC 58.381 45.455 0.00 0.00 0.00 2.29
2558 4291 0.609957 TCTACCCGCACGGAGAAGAA 60.610 55.000 11.42 0.00 37.50 2.52
2559 4292 1.001764 TCTACCCGCACGGAGAAGA 60.002 57.895 11.42 7.23 37.50 2.87
2560 4293 1.030488 TCTCTACCCGCACGGAGAAG 61.030 60.000 11.42 4.90 37.50 2.85
2601 4339 9.846248 GAAATTCTGCTACTTGTTCATGTATTT 57.154 29.630 0.00 0.00 0.00 1.40
2648 4386 3.246416 AGTCACAAGGGACTACTCAGT 57.754 47.619 2.53 0.00 45.95 3.41
2701 4439 2.489985 CCACCCCCAACAAGTTCACATA 60.490 50.000 0.00 0.00 0.00 2.29
2702 4440 1.703411 CACCCCCAACAAGTTCACAT 58.297 50.000 0.00 0.00 0.00 3.21
2703 4441 0.396417 CCACCCCCAACAAGTTCACA 60.396 55.000 0.00 0.00 0.00 3.58
2704 4442 1.112916 CCCACCCCCAACAAGTTCAC 61.113 60.000 0.00 0.00 0.00 3.18
2705 4443 1.231641 CCCACCCCCAACAAGTTCA 59.768 57.895 0.00 0.00 0.00 3.18
2706 4444 2.207229 GCCCACCCCCAACAAGTTC 61.207 63.158 0.00 0.00 0.00 3.01
2707 4445 2.123033 GCCCACCCCCAACAAGTT 60.123 61.111 0.00 0.00 0.00 2.66
2708 4446 3.110031 AGCCCACCCCCAACAAGT 61.110 61.111 0.00 0.00 0.00 3.16
2709 4447 2.601367 CAGCCCACCCCCAACAAG 60.601 66.667 0.00 0.00 0.00 3.16
2714 4452 4.992982 TACTGCAGCCCACCCCCA 62.993 66.667 15.27 0.00 0.00 4.96
2715 4453 4.426313 GTACTGCAGCCCACCCCC 62.426 72.222 15.27 0.00 0.00 5.40
2719 4457 0.674895 CTCCAAGTACTGCAGCCCAC 60.675 60.000 15.27 9.63 0.00 4.61
2756 4494 1.153086 GCCCGCATCTGTTGGAGAT 60.153 57.895 0.00 0.00 42.70 2.75
2757 4495 0.975556 TAGCCCGCATCTGTTGGAGA 60.976 55.000 0.00 0.00 34.25 3.71
2758 4496 0.531532 CTAGCCCGCATCTGTTGGAG 60.532 60.000 0.00 0.00 0.00 3.86
2759 4497 1.522092 CTAGCCCGCATCTGTTGGA 59.478 57.895 0.00 0.00 0.00 3.53
2760 4498 2.182842 GCTAGCCCGCATCTGTTGG 61.183 63.158 2.29 0.00 0.00 3.77
2761 4499 1.450134 TGCTAGCCCGCATCTGTTG 60.450 57.895 13.29 0.00 34.44 3.33
2762 4500 1.450312 GTGCTAGCCCGCATCTGTT 60.450 57.895 13.29 0.00 42.62 3.16
2763 4501 2.187946 GTGCTAGCCCGCATCTGT 59.812 61.111 13.29 0.00 42.62 3.41
2764 4502 2.963854 CGTGCTAGCCCGCATCTG 60.964 66.667 13.29 0.00 42.62 2.90
2765 4503 3.147595 TCGTGCTAGCCCGCATCT 61.148 61.111 15.18 0.00 42.62 2.90
2766 4504 2.962253 GTCGTGCTAGCCCGCATC 60.962 66.667 15.18 4.33 42.62 3.91
2767 4505 4.873129 CGTCGTGCTAGCCCGCAT 62.873 66.667 15.18 0.00 42.62 4.73
2777 4515 2.995938 AAAAATTAGCGCGTCGTGC 58.004 47.368 22.77 22.77 39.59 5.34
2796 4534 2.327568 GCTATTTCAGCGCTGCAAAAA 58.672 42.857 32.44 25.82 41.37 1.94
2797 4535 1.981254 GCTATTTCAGCGCTGCAAAA 58.019 45.000 32.44 26.52 41.37 2.44
2798 4536 3.700577 GCTATTTCAGCGCTGCAAA 57.299 47.368 32.44 28.54 41.37 3.68
2807 4545 6.926280 TTTTGTGCAATAACGCTATTTCAG 57.074 33.333 0.00 0.00 0.00 3.02
2808 4546 6.697455 TGTTTTTGTGCAATAACGCTATTTCA 59.303 30.769 11.50 0.00 35.80 2.69
2809 4547 7.001347 GTGTTTTTGTGCAATAACGCTATTTC 58.999 34.615 17.87 0.00 38.66 2.17
2810 4548 6.477033 TGTGTTTTTGTGCAATAACGCTATTT 59.523 30.769 22.25 0.00 40.70 1.40
2811 4549 5.980116 TGTGTTTTTGTGCAATAACGCTATT 59.020 32.000 22.25 0.00 40.70 1.73
2812 4550 5.524284 TGTGTTTTTGTGCAATAACGCTAT 58.476 33.333 22.25 0.00 40.70 2.97
2813 4551 4.921547 TGTGTTTTTGTGCAATAACGCTA 58.078 34.783 22.25 12.44 40.70 4.26
2814 4552 3.775202 TGTGTTTTTGTGCAATAACGCT 58.225 36.364 22.25 0.00 40.70 5.07
2815 4553 3.601360 GCTGTGTTTTTGTGCAATAACGC 60.601 43.478 18.14 18.14 40.58 4.84
2816 4554 3.360574 CGCTGTGTTTTTGTGCAATAACG 60.361 43.478 11.50 0.00 35.80 3.18
2817 4555 3.601360 GCGCTGTGTTTTTGTGCAATAAC 60.601 43.478 0.00 10.02 37.20 1.89
2818 4556 2.537625 GCGCTGTGTTTTTGTGCAATAA 59.462 40.909 0.00 0.00 37.20 1.40
2819 4557 2.123342 GCGCTGTGTTTTTGTGCAATA 58.877 42.857 0.00 0.00 37.20 1.90
2820 4558 0.929615 GCGCTGTGTTTTTGTGCAAT 59.070 45.000 0.00 0.00 37.20 3.56
2821 4559 1.080995 GGCGCTGTGTTTTTGTGCAA 61.081 50.000 7.64 0.00 38.76 4.08
2822 4560 1.518133 GGCGCTGTGTTTTTGTGCA 60.518 52.632 7.64 0.00 38.76 4.57
2823 4561 2.237066 GGGCGCTGTGTTTTTGTGC 61.237 57.895 7.64 0.00 36.59 4.57
2824 4562 0.459237 TTGGGCGCTGTGTTTTTGTG 60.459 50.000 7.64 0.00 0.00 3.33
2825 4563 0.459411 GTTGGGCGCTGTGTTTTTGT 60.459 50.000 7.64 0.00 0.00 2.83
2826 4564 1.151172 GGTTGGGCGCTGTGTTTTTG 61.151 55.000 7.64 0.00 0.00 2.44
2827 4565 1.142965 GGTTGGGCGCTGTGTTTTT 59.857 52.632 7.64 0.00 0.00 1.94
2828 4566 2.791868 GGGTTGGGCGCTGTGTTTT 61.792 57.895 7.64 0.00 0.00 2.43
2829 4567 3.223589 GGGTTGGGCGCTGTGTTT 61.224 61.111 7.64 0.00 0.00 2.83
2847 4585 3.747976 GTTGCATGTGGGGCCGTC 61.748 66.667 0.00 0.00 0.00 4.79
2848 4586 4.284550 AGTTGCATGTGGGGCCGT 62.285 61.111 0.00 0.00 0.00 5.68
2849 4587 3.751246 CAGTTGCATGTGGGGCCG 61.751 66.667 0.00 0.00 0.00 6.13
2850 4588 4.073200 GCAGTTGCATGTGGGGCC 62.073 66.667 0.00 0.00 41.59 5.80
2851 4589 4.073200 GGCAGTTGCATGTGGGGC 62.073 66.667 6.43 0.00 44.36 5.80
2852 4590 3.384532 GGGCAGTTGCATGTGGGG 61.385 66.667 6.43 0.00 44.36 4.96
2853 4591 2.601067 TGGGCAGTTGCATGTGGG 60.601 61.111 6.43 0.00 44.36 4.61
2854 4592 2.652530 GTGGGCAGTTGCATGTGG 59.347 61.111 6.43 0.00 44.36 4.17
2855 4593 2.256158 CGTGGGCAGTTGCATGTG 59.744 61.111 6.43 0.00 44.36 3.21
2856 4594 3.673484 GCGTGGGCAGTTGCATGT 61.673 61.111 6.43 0.00 44.36 3.21
2857 4595 4.764336 CGCGTGGGCAGTTGCATG 62.764 66.667 6.43 0.00 44.36 4.06
2876 4614 4.947147 TTTGAGGCGCCGGCTTGT 62.947 61.111 26.68 8.10 38.98 3.16
2877 4615 2.490993 AAATTTGAGGCGCCGGCTTG 62.491 55.000 26.68 11.41 38.98 4.01
2878 4616 2.275380 AAATTTGAGGCGCCGGCTT 61.275 52.632 26.68 10.06 38.98 4.35
2879 4617 2.676471 AAATTTGAGGCGCCGGCT 60.676 55.556 26.68 14.94 42.48 5.52
2880 4618 2.506881 CAAATTTGAGGCGCCGGC 60.507 61.111 23.20 19.07 38.90 6.13
2881 4619 2.506881 GCAAATTTGAGGCGCCGG 60.507 61.111 23.20 0.00 0.00 6.13
2882 4620 1.372748 TTGCAAATTTGAGGCGCCG 60.373 52.632 23.20 4.86 0.00 6.46
2883 4621 1.291184 GGTTGCAAATTTGAGGCGCC 61.291 55.000 21.89 21.89 0.00 6.53
2884 4622 0.319813 AGGTTGCAAATTTGAGGCGC 60.320 50.000 22.31 0.00 0.00 6.53
2885 4623 1.701704 GAGGTTGCAAATTTGAGGCG 58.298 50.000 22.31 0.00 0.00 5.52
2886 4624 1.701704 CGAGGTTGCAAATTTGAGGC 58.298 50.000 22.31 7.20 0.00 4.70
2887 4625 1.000385 TGCGAGGTTGCAAATTTGAGG 60.000 47.619 22.31 0.00 43.02 3.86
2888 4626 2.322161 CTGCGAGGTTGCAAATTTGAG 58.678 47.619 22.31 3.03 45.74 3.02
2889 4627 1.602668 GCTGCGAGGTTGCAAATTTGA 60.603 47.619 22.31 4.41 45.74 2.69
2890 4628 0.785979 GCTGCGAGGTTGCAAATTTG 59.214 50.000 14.03 14.03 45.74 2.32
2891 4629 0.319813 GGCTGCGAGGTTGCAAATTT 60.320 50.000 0.00 0.00 45.74 1.82
2892 4630 1.290009 GGCTGCGAGGTTGCAAATT 59.710 52.632 0.00 0.00 45.74 1.82
2893 4631 2.639327 GGGCTGCGAGGTTGCAAAT 61.639 57.895 0.00 0.00 45.74 2.32
2894 4632 3.294493 GGGCTGCGAGGTTGCAAA 61.294 61.111 0.00 0.00 45.74 3.68
2912 4650 0.454285 TCTGCAAATTTAGCGCACGC 60.454 50.000 11.47 6.99 42.33 5.34
2913 4651 2.178474 ATCTGCAAATTTAGCGCACG 57.822 45.000 11.47 0.00 33.85 5.34
2914 4652 2.527487 CGAATCTGCAAATTTAGCGCAC 59.473 45.455 11.47 0.00 33.85 5.34
2915 4653 2.161410 ACGAATCTGCAAATTTAGCGCA 59.839 40.909 11.47 2.16 33.85 6.09
2916 4654 2.785679 ACGAATCTGCAAATTTAGCGC 58.214 42.857 0.00 0.00 33.85 5.92
2917 4655 5.745653 AAAACGAATCTGCAAATTTAGCG 57.254 34.783 0.00 0.00 33.85 4.26
2918 4656 6.787043 CACAAAAACGAATCTGCAAATTTAGC 59.213 34.615 0.00 0.00 0.00 3.09
2919 4657 7.788846 CACACAAAAACGAATCTGCAAATTTAG 59.211 33.333 0.00 0.00 0.00 1.85
2920 4658 7.276658 ACACACAAAAACGAATCTGCAAATTTA 59.723 29.630 0.00 0.00 0.00 1.40
2921 4659 6.091986 ACACACAAAAACGAATCTGCAAATTT 59.908 30.769 0.00 0.00 0.00 1.82
2922 4660 5.580297 ACACACAAAAACGAATCTGCAAATT 59.420 32.000 0.00 0.00 0.00 1.82
2923 4661 5.005586 CACACACAAAAACGAATCTGCAAAT 59.994 36.000 0.00 0.00 0.00 2.32
2924 4662 4.325741 CACACACAAAAACGAATCTGCAAA 59.674 37.500 0.00 0.00 0.00 3.68
2925 4663 3.856521 CACACACAAAAACGAATCTGCAA 59.143 39.130 0.00 0.00 0.00 4.08
2926 4664 3.433709 CACACACAAAAACGAATCTGCA 58.566 40.909 0.00 0.00 0.00 4.41
2927 4665 2.216263 GCACACACAAAAACGAATCTGC 59.784 45.455 0.00 0.00 0.00 4.26
2928 4666 3.694734 AGCACACACAAAAACGAATCTG 58.305 40.909 0.00 0.00 0.00 2.90
2929 4667 3.627577 AGAGCACACACAAAAACGAATCT 59.372 39.130 0.00 0.00 0.00 2.40
2930 4668 3.952535 AGAGCACACACAAAAACGAATC 58.047 40.909 0.00 0.00 0.00 2.52
2931 4669 5.689383 ATAGAGCACACACAAAAACGAAT 57.311 34.783 0.00 0.00 0.00 3.34
2932 4670 5.493133 AATAGAGCACACACAAAAACGAA 57.507 34.783 0.00 0.00 0.00 3.85
2933 4671 5.493133 AAATAGAGCACACACAAAAACGA 57.507 34.783 0.00 0.00 0.00 3.85
2934 4672 6.689241 TGTAAAATAGAGCACACACAAAAACG 59.311 34.615 0.00 0.00 0.00 3.60
2935 4673 7.979115 TGTAAAATAGAGCACACACAAAAAC 57.021 32.000 0.00 0.00 0.00 2.43
2936 4674 8.247562 AGTTGTAAAATAGAGCACACACAAAAA 58.752 29.630 0.00 0.00 0.00 1.94
2937 4675 7.767261 AGTTGTAAAATAGAGCACACACAAAA 58.233 30.769 0.00 0.00 0.00 2.44
2938 4676 7.328277 AGTTGTAAAATAGAGCACACACAAA 57.672 32.000 0.00 0.00 0.00 2.83
2939 4677 6.935741 AGTTGTAAAATAGAGCACACACAA 57.064 33.333 0.00 0.00 0.00 3.33
2940 4678 7.170828 CAGTAGTTGTAAAATAGAGCACACACA 59.829 37.037 0.00 0.00 0.00 3.72
2941 4679 7.170998 ACAGTAGTTGTAAAATAGAGCACACAC 59.829 37.037 0.00 0.00 38.56 3.82
2942 4680 7.214381 ACAGTAGTTGTAAAATAGAGCACACA 58.786 34.615 0.00 0.00 38.56 3.72
2943 4681 7.653767 ACAGTAGTTGTAAAATAGAGCACAC 57.346 36.000 0.00 0.00 38.56 3.82
2959 4697 3.611766 AATAGCGCTCCAACAGTAGTT 57.388 42.857 16.34 0.00 38.88 2.24
2960 4698 3.611766 AAATAGCGCTCCAACAGTAGT 57.388 42.857 16.34 0.00 0.00 2.73
2961 4699 4.391830 TCAAAAATAGCGCTCCAACAGTAG 59.608 41.667 16.34 0.00 0.00 2.57
2962 4700 4.320023 TCAAAAATAGCGCTCCAACAGTA 58.680 39.130 16.34 0.00 0.00 2.74
2963 4701 3.146066 TCAAAAATAGCGCTCCAACAGT 58.854 40.909 16.34 0.00 0.00 3.55
2964 4702 3.829886 TCAAAAATAGCGCTCCAACAG 57.170 42.857 16.34 1.14 0.00 3.16
2965 4703 3.181511 CGATCAAAAATAGCGCTCCAACA 60.182 43.478 16.34 0.00 0.00 3.33
2966 4704 3.354397 CGATCAAAAATAGCGCTCCAAC 58.646 45.455 16.34 0.00 0.00 3.77
2967 4705 2.223249 GCGATCAAAAATAGCGCTCCAA 60.223 45.455 16.34 0.00 43.85 3.53
2968 4706 1.330521 GCGATCAAAAATAGCGCTCCA 59.669 47.619 16.34 0.00 43.85 3.86
2969 4707 1.657538 CGCGATCAAAAATAGCGCTCC 60.658 52.381 16.34 0.00 44.91 4.70
2970 4708 1.652219 CGCGATCAAAAATAGCGCTC 58.348 50.000 16.34 0.00 44.91 5.03
2971 4709 3.806257 CGCGATCAAAAATAGCGCT 57.194 47.368 17.26 17.26 44.91 5.92
2974 4712 1.104579 CGTGCGCGATCAAAAATAGC 58.895 50.000 16.08 0.00 41.33 2.97
2975 4713 1.104579 GCGTGCGCGATCAAAAATAG 58.895 50.000 26.19 0.00 41.33 1.73
2976 4714 3.212519 GCGTGCGCGATCAAAAATA 57.787 47.368 26.19 0.00 41.33 1.40
2977 4715 4.056097 GCGTGCGCGATCAAAAAT 57.944 50.000 26.19 0.00 41.33 1.82
2988 4726 3.362851 GAAAAGGTAGGCGCGTGCG 62.363 63.158 15.81 10.36 44.10 5.34
2989 4727 2.240612 CTGAAAAGGTAGGCGCGTGC 62.241 60.000 13.78 13.78 41.71 5.34
2990 4728 1.787847 CTGAAAAGGTAGGCGCGTG 59.212 57.895 13.84 0.00 0.00 5.34
2991 4729 2.033194 GCTGAAAAGGTAGGCGCGT 61.033 57.895 8.43 8.08 0.00 6.01
2992 4730 2.785258 GCTGAAAAGGTAGGCGCG 59.215 61.111 0.00 0.00 0.00 6.86
2993 4731 2.785258 CGCTGAAAAGGTAGGCGC 59.215 61.111 0.00 0.00 39.42 6.53
2995 4733 2.785258 CGCGCTGAAAAGGTAGGC 59.215 61.111 5.56 0.00 0.00 3.93
2996 4734 2.785258 GCGCGCTGAAAAGGTAGG 59.215 61.111 26.67 0.00 0.00 3.18
2997 4735 2.395690 CGCGCGCTGAAAAGGTAG 59.604 61.111 30.48 5.07 0.00 3.18
2998 4736 3.115892 CCGCGCGCTGAAAAGGTA 61.116 61.111 30.48 0.00 0.00 3.08
3008 4746 1.702299 CACTATATAAGCCGCGCGC 59.298 57.895 27.36 23.91 37.98 6.86
3009 4747 1.006825 TGCACTATATAAGCCGCGCG 61.007 55.000 25.67 25.67 31.11 6.86
3010 4748 1.324736 GATGCACTATATAAGCCGCGC 59.675 52.381 0.00 0.00 31.11 6.86
3011 4749 2.600420 CAGATGCACTATATAAGCCGCG 59.400 50.000 0.00 0.00 31.11 6.46
3012 4750 3.589988 ACAGATGCACTATATAAGCCGC 58.410 45.455 0.00 0.00 0.00 6.53
3013 4751 5.230182 TCAACAGATGCACTATATAAGCCG 58.770 41.667 0.00 0.00 0.00 5.52
3014 4752 6.931281 TCTTCAACAGATGCACTATATAAGCC 59.069 38.462 0.00 0.00 0.00 4.35
3015 4753 7.953158 TCTTCAACAGATGCACTATATAAGC 57.047 36.000 0.00 0.96 0.00 3.09
3028 4766 7.927629 GCTCTCTTTAGATCATCTTCAACAGAT 59.072 37.037 0.00 0.00 43.80 2.90
3029 4767 7.093596 TGCTCTCTTTAGATCATCTTCAACAGA 60.094 37.037 0.00 0.00 35.33 3.41
3030 4768 7.040494 TGCTCTCTTTAGATCATCTTCAACAG 58.960 38.462 0.00 0.00 0.00 3.16
3031 4769 6.939622 TGCTCTCTTTAGATCATCTTCAACA 58.060 36.000 0.00 0.00 0.00 3.33
3032 4770 7.840342 TTGCTCTCTTTAGATCATCTTCAAC 57.160 36.000 0.00 0.00 28.44 3.18
3033 4771 9.458727 AATTTGCTCTCTTTAGATCATCTTCAA 57.541 29.630 0.00 0.00 28.44 2.69
3034 4772 9.107177 GAATTTGCTCTCTTTAGATCATCTTCA 57.893 33.333 0.00 0.00 28.44 3.02
3035 4773 9.107177 TGAATTTGCTCTCTTTAGATCATCTTC 57.893 33.333 0.00 0.00 28.44 2.87
3036 4774 9.629878 ATGAATTTGCTCTCTTTAGATCATCTT 57.370 29.630 0.00 0.00 28.44 2.40
3037 4775 9.058174 CATGAATTTGCTCTCTTTAGATCATCT 57.942 33.333 0.00 0.00 28.44 2.90
3038 4776 9.053840 TCATGAATTTGCTCTCTTTAGATCATC 57.946 33.333 0.00 0.00 28.44 2.92
3039 4777 8.975663 TCATGAATTTGCTCTCTTTAGATCAT 57.024 30.769 0.00 0.00 28.44 2.45
3040 4778 8.671921 GTTCATGAATTTGCTCTCTTTAGATCA 58.328 33.333 12.12 0.00 0.00 2.92
3041 4779 8.891720 AGTTCATGAATTTGCTCTCTTTAGATC 58.108 33.333 12.12 0.00 0.00 2.75
3042 4780 8.804912 AGTTCATGAATTTGCTCTCTTTAGAT 57.195 30.769 12.12 0.00 0.00 1.98
3043 4781 7.879677 TGAGTTCATGAATTTGCTCTCTTTAGA 59.120 33.333 12.12 0.00 0.00 2.10
3044 4782 8.037382 TGAGTTCATGAATTTGCTCTCTTTAG 57.963 34.615 12.12 0.00 0.00 1.85
3045 4783 7.984422 TGAGTTCATGAATTTGCTCTCTTTA 57.016 32.000 12.12 0.00 0.00 1.85
3046 4784 6.889301 TGAGTTCATGAATTTGCTCTCTTT 57.111 33.333 12.12 0.00 0.00 2.52
3047 4785 6.489361 ACTTGAGTTCATGAATTTGCTCTCTT 59.511 34.615 12.12 0.00 0.00 2.85
3052 4792 7.516198 AGTTACTTGAGTTCATGAATTTGCT 57.484 32.000 12.12 3.56 0.00 3.91
3102 4842 9.349713 TGATTACTTCCACTTCAAGTAACATTT 57.650 29.630 7.08 0.00 44.97 2.32
3103 4843 8.918202 TGATTACTTCCACTTCAAGTAACATT 57.082 30.769 7.08 0.00 44.97 2.71
3104 4844 8.918202 TTGATTACTTCCACTTCAAGTAACAT 57.082 30.769 7.08 0.00 44.97 2.71
3105 4845 7.041372 GCTTGATTACTTCCACTTCAAGTAACA 60.041 37.037 11.34 5.72 44.97 2.41
3106 4846 7.041372 TGCTTGATTACTTCCACTTCAAGTAAC 60.041 37.037 11.34 3.75 44.97 2.50
3107 4847 6.995686 TGCTTGATTACTTCCACTTCAAGTAA 59.004 34.615 11.34 7.33 45.78 2.24
3108 4848 6.530120 TGCTTGATTACTTCCACTTCAAGTA 58.470 36.000 11.34 5.51 43.21 2.24
3113 4853 6.970484 TCTTTTGCTTGATTACTTCCACTTC 58.030 36.000 0.00 0.00 0.00 3.01
3130 4870 4.257267 AGGGTAATTGCAGTTCTTTTGC 57.743 40.909 0.00 0.00 41.86 3.68
3159 4899 3.191371 ACTTTTCCGCTCCATCAATTGAC 59.809 43.478 11.07 0.00 0.00 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.