Multiple sequence alignment - TraesCS7B01G371900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G371900 chr7B 100.000 7694 0 0 1 7694 637775747 637768054 0.000000e+00 14209.0
1 TraesCS7B01G371900 chr7B 87.613 662 60 12 3 655 325990338 325990986 0.000000e+00 749.0
2 TraesCS7B01G371900 chr7D 93.393 2361 118 23 657 3003 575686178 575683842 0.000000e+00 3461.0
3 TraesCS7B01G371900 chr7D 87.849 1753 134 38 5768 7484 575681175 575679466 0.000000e+00 1984.0
4 TraesCS7B01G371900 chr7D 86.345 1494 141 35 4225 5680 575682639 575681171 0.000000e+00 1570.0
5 TraesCS7B01G371900 chr7D 85.998 807 72 18 3469 4239 575683455 575682654 0.000000e+00 826.0
6 TraesCS7B01G371900 chr7D 88.272 648 62 8 1 640 105671091 105671732 0.000000e+00 763.0
7 TraesCS7B01G371900 chr7D 94.859 389 20 0 3041 3429 575683842 575683454 6.600000e-170 608.0
8 TraesCS7B01G371900 chr7D 95.855 193 8 0 7502 7694 575679481 575679289 5.800000e-81 313.0
9 TraesCS7B01G371900 chr7D 92.453 53 4 0 2623 2675 50646795 50646847 8.280000e-10 76.8
10 TraesCS7B01G371900 chr7A 87.116 2181 216 33 2504 4639 666188167 666186007 0.000000e+00 2410.0
11 TraesCS7B01G371900 chr7A 88.928 1725 125 36 5799 7484 666185001 666183304 0.000000e+00 2067.0
12 TraesCS7B01G371900 chr7A 90.959 1283 71 20 657 1902 666190169 666188895 0.000000e+00 1685.0
13 TraesCS7B01G371900 chr7A 86.702 940 99 16 4757 5680 666185946 666185017 0.000000e+00 1020.0
14 TraesCS7B01G371900 chr7A 94.137 597 25 2 1909 2505 666188850 666188264 0.000000e+00 900.0
15 TraesCS7B01G371900 chr7A 94.819 193 10 0 7502 7694 666183319 666183127 1.250000e-77 302.0
16 TraesCS7B01G371900 chr3B 90.288 659 31 6 1 636 807430983 807431631 0.000000e+00 832.0
17 TraesCS7B01G371900 chr3B 88.629 642 62 7 1 636 749724520 749725156 0.000000e+00 771.0
18 TraesCS7B01G371900 chr3B 87.994 658 66 11 4 655 661208403 661209053 0.000000e+00 765.0
19 TraesCS7B01G371900 chr3B 82.377 244 36 5 3075 3312 825764607 825764849 1.010000e-48 206.0
20 TraesCS7B01G371900 chr4D 89.164 646 61 9 21 660 468857706 468857064 0.000000e+00 797.0
21 TraesCS7B01G371900 chr4D 98.667 75 1 0 7611 7685 419197730 419197804 4.840000e-27 134.0
22 TraesCS7B01G371900 chr4D 94.048 84 4 1 7611 7694 326385042 326385124 8.110000e-25 126.0
23 TraesCS7B01G371900 chr1B 87.897 661 64 8 1 655 535703059 535703709 0.000000e+00 763.0
24 TraesCS7B01G371900 chr1B 87.367 657 69 10 1 648 111966883 111966232 0.000000e+00 741.0
25 TraesCS7B01G371900 chr1B 95.062 81 3 1 7614 7694 666073021 666072942 8.110000e-25 126.0
26 TraesCS7B01G371900 chr2D 87.944 647 64 9 1 640 534305064 534305703 0.000000e+00 750.0
27 TraesCS7B01G371900 chr2D 78.761 339 48 13 2623 2954 130833393 130833714 1.010000e-48 206.0
28 TraesCS7B01G371900 chr3A 95.238 84 3 1 7611 7694 682987733 682987815 1.740000e-26 132.0
29 TraesCS7B01G371900 chr3A 87.000 100 13 0 1000 1099 38316581 38316680 6.310000e-21 113.0
30 TraesCS7B01G371900 chr2A 96.250 80 2 1 7606 7685 102043520 102043598 6.270000e-26 130.0
31 TraesCS7B01G371900 chr2A 96.250 80 2 1 7606 7685 102325396 102325318 6.270000e-26 130.0
32 TraesCS7B01G371900 chr1D 95.062 81 3 1 7614 7694 478274027 478273948 8.110000e-25 126.0
33 TraesCS7B01G371900 chr6D 78.676 136 13 11 2552 2675 36215388 36215519 8.280000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G371900 chr7B 637768054 637775747 7693 True 14209.000000 14209 100.0000 1 7694 1 chr7B.!!$R1 7693
1 TraesCS7B01G371900 chr7B 325990338 325990986 648 False 749.000000 749 87.6130 3 655 1 chr7B.!!$F1 652
2 TraesCS7B01G371900 chr7D 575679289 575686178 6889 True 1460.333333 3461 90.7165 657 7694 6 chr7D.!!$R1 7037
3 TraesCS7B01G371900 chr7D 105671091 105671732 641 False 763.000000 763 88.2720 1 640 1 chr7D.!!$F2 639
4 TraesCS7B01G371900 chr7A 666183127 666190169 7042 True 1397.333333 2410 90.4435 657 7694 6 chr7A.!!$R1 7037
5 TraesCS7B01G371900 chr3B 807430983 807431631 648 False 832.000000 832 90.2880 1 636 1 chr3B.!!$F3 635
6 TraesCS7B01G371900 chr3B 749724520 749725156 636 False 771.000000 771 88.6290 1 636 1 chr3B.!!$F2 635
7 TraesCS7B01G371900 chr3B 661208403 661209053 650 False 765.000000 765 87.9940 4 655 1 chr3B.!!$F1 651
8 TraesCS7B01G371900 chr4D 468857064 468857706 642 True 797.000000 797 89.1640 21 660 1 chr4D.!!$R1 639
9 TraesCS7B01G371900 chr1B 535703059 535703709 650 False 763.000000 763 87.8970 1 655 1 chr1B.!!$F1 654
10 TraesCS7B01G371900 chr1B 111966232 111966883 651 True 741.000000 741 87.3670 1 648 1 chr1B.!!$R1 647
11 TraesCS7B01G371900 chr2D 534305064 534305703 639 False 750.000000 750 87.9440 1 640 1 chr2D.!!$F2 639

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
356 364 0.599466 TCCTCGATAGCGACGACGAT 60.599 55.000 12.29 7.51 42.51 3.73 F
1112 1174 0.672401 TGCAAGTAAGCAGCCGTACC 60.672 55.000 0.00 0.00 40.11 3.34 F
1320 1382 1.135915 GCTCTGCGAATCTTCCTCTGA 59.864 52.381 0.00 0.00 0.00 3.27 F
1331 1400 1.273606 CTTCCTCTGAGCTGTTTCGGA 59.726 52.381 0.00 0.00 0.00 4.55 F
2744 2989 0.537371 GCTACCTTTGGGCACACACT 60.537 55.000 0.00 0.00 35.63 3.55 F
4056 4366 0.614812 TGTGGATTAGCAGCAGCAGA 59.385 50.000 3.17 0.00 45.49 4.26 F
4196 4512 0.107312 CCCAGCAGAGGAAGACCATG 60.107 60.000 0.00 0.00 38.94 3.66 F
4939 5300 0.855349 CACTCGTGTGCTCTGTCAAC 59.145 55.000 4.47 0.00 37.38 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1790 1893 0.396435 CACCACTGCCAGTTCCAGTA 59.604 55.000 0.00 0.00 41.34 2.74 R
2533 2775 0.106268 TTTTGGCTCTCAAGGGCACA 60.106 50.000 3.95 0.00 38.93 4.57 R
2561 2803 0.595095 CAGCCACAGTTTGAGAAGGC 59.405 55.000 0.00 0.00 42.31 4.35 R
2917 3163 1.132643 ACTCGACTTACCTCATCACGC 59.867 52.381 0.00 0.00 0.00 5.34 R
4173 4489 0.103937 GTCTTCCTCTGCTGGGATCG 59.896 60.000 0.00 0.00 32.41 3.69 R
5687 6069 0.038310 GCTTGCCTAACTTGGGGTCT 59.962 55.000 0.00 0.00 0.00 3.85 R
5699 6081 0.109153 TGACACATGACAGCTTGCCT 59.891 50.000 0.00 0.00 0.00 4.75 R
6934 7334 0.166814 AAACGAGCAGAATCGCTTGC 59.833 50.000 12.07 0.42 45.83 4.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
153 161 2.868920 GCTTCGTCCTCGTCGAGT 59.131 61.111 20.37 0.00 38.52 4.18
203 211 2.913060 GAGGAGATAGCCCGGCGT 60.913 66.667 6.01 0.00 0.00 5.68
258 266 2.359107 ACGACTACCTCCGCGACA 60.359 61.111 8.23 0.00 0.00 4.35
344 352 1.356979 CAGCGTCGTGATCCTCGAT 59.643 57.895 11.98 0.00 39.45 3.59
356 364 0.599466 TCCTCGATAGCGACGACGAT 60.599 55.000 12.29 7.51 42.51 3.73
476 497 1.133790 GGTGACTACACGCGGTTCTAT 59.866 52.381 12.47 0.00 46.77 1.98
640 701 3.310227 TGAATTTACGTCGTGTTTGTGCT 59.690 39.130 8.47 0.00 0.00 4.40
648 709 3.545228 CGTCGTGTTTGTGCTGTGTTTAT 60.545 43.478 0.00 0.00 0.00 1.40
689 750 3.490526 CCGTCATGTTTCCAAAGCAAAAG 59.509 43.478 0.00 0.00 0.00 2.27
690 751 4.358851 CGTCATGTTTCCAAAGCAAAAGA 58.641 39.130 0.00 0.00 0.00 2.52
693 754 6.018832 CGTCATGTTTCCAAAGCAAAAGAAAT 60.019 34.615 0.00 0.00 31.44 2.17
698 759 3.988819 TCCAAAGCAAAAGAAATTCCCG 58.011 40.909 0.00 0.00 0.00 5.14
724 785 3.628280 GATCTATCCCGGACGGCGC 62.628 68.421 6.90 0.00 0.00 6.53
1112 1174 0.672401 TGCAAGTAAGCAGCCGTACC 60.672 55.000 0.00 0.00 40.11 3.34
1129 1191 1.324005 ACCTAGGGCTCGTTCTCTGC 61.324 60.000 14.81 0.00 0.00 4.26
1152 1214 1.997606 GGTTTCGTTCGGTCTGTATGG 59.002 52.381 0.00 0.00 0.00 2.74
1155 1217 1.876714 CGTTCGGTCTGTATGGGCG 60.877 63.158 0.00 0.00 0.00 6.13
1220 1282 2.073816 GGCAAGTTCGCTGCTAGTTTA 58.926 47.619 0.00 0.00 0.00 2.01
1241 1303 4.616181 AGCTGTAATTTATCGTTGTGCC 57.384 40.909 0.00 0.00 0.00 5.01
1266 1328 3.474600 CCTGGATTGATTCGAGATTGCT 58.525 45.455 0.00 0.00 32.22 3.91
1286 1348 1.254026 TGTAGCTGTAGGTGCGACTT 58.746 50.000 0.00 0.00 37.06 3.01
1318 1380 1.484038 AGCTCTGCGAATCTTCCTCT 58.516 50.000 0.00 0.00 0.00 3.69
1320 1382 1.135915 GCTCTGCGAATCTTCCTCTGA 59.864 52.381 0.00 0.00 0.00 3.27
1329 1398 2.732412 TCTTCCTCTGAGCTGTTTCG 57.268 50.000 0.00 0.00 0.00 3.46
1331 1400 1.273606 CTTCCTCTGAGCTGTTTCGGA 59.726 52.381 0.00 0.00 0.00 4.55
1360 1429 8.759641 GCTTAGTGATACTGTGAACATCTTATG 58.240 37.037 0.00 0.00 0.00 1.90
1511 1608 5.423015 TCAGAACTGAATAGAGATTGTGCC 58.577 41.667 1.79 0.00 36.53 5.01
1512 1609 5.188555 TCAGAACTGAATAGAGATTGTGCCT 59.811 40.000 1.79 0.00 36.53 4.75
1846 1949 5.009610 ACAAGTGAGCATTGTTTTACCGAAT 59.990 36.000 0.00 0.00 37.61 3.34
1943 2084 9.061610 CATATAATTTGGTCTTTTGTGTTCGAC 57.938 33.333 0.00 0.00 0.00 4.20
1964 2105 6.653320 TCGACATTTACTTGAATTTAGGCTGT 59.347 34.615 0.00 0.00 0.00 4.40
2075 2216 1.927174 CGTCCAGAATTAAGGCACTCG 59.073 52.381 0.00 0.00 38.49 4.18
2146 2287 5.522460 CCTCACAGGTACAATATTACAACGG 59.478 44.000 0.00 0.00 0.00 4.44
2154 2295 8.480501 AGGTACAATATTACAACGGTACTGATT 58.519 33.333 9.17 0.00 33.47 2.57
2247 2389 2.127271 TCACATTGCGGGATGATGTT 57.873 45.000 2.07 0.00 32.01 2.71
2345 2489 9.506018 TTGATAATTTCTTCAGTGAGTTCATCA 57.494 29.630 0.00 0.00 34.79 3.07
2465 2609 7.046033 ACCGTTTAAGGACATAAGGTAGAATG 58.954 38.462 0.00 0.00 34.73 2.67
2466 2610 7.046033 CCGTTTAAGGACATAAGGTAGAATGT 58.954 38.462 0.00 0.00 39.00 2.71
2467 2611 7.551617 CCGTTTAAGGACATAAGGTAGAATGTT 59.448 37.037 0.00 0.00 36.48 2.71
2468 2612 8.388103 CGTTTAAGGACATAAGGTAGAATGTTG 58.612 37.037 0.00 0.00 36.48 3.33
2474 2618 7.607991 AGGACATAAGGTAGAATGTTGTTTCAG 59.392 37.037 0.00 0.00 36.48 3.02
2518 2760 4.574674 AGGACATATCTGCCAAAGAACA 57.425 40.909 0.00 0.00 38.79 3.18
2558 2800 2.695147 CCCTTGAGAGCCAAAAGTTTGT 59.305 45.455 3.26 0.00 36.45 2.83
2561 2803 4.498682 CCTTGAGAGCCAAAAGTTTGTCAG 60.499 45.833 3.26 0.00 36.45 3.51
2586 2828 3.550820 TCTCAAACTGTGGCTGCTTAAA 58.449 40.909 0.00 0.00 0.00 1.52
2589 2831 5.068987 TCTCAAACTGTGGCTGCTTAAAAAT 59.931 36.000 0.00 0.00 0.00 1.82
2671 2916 4.162131 AGTTCATTTTTGGAGCCAAGTGTT 59.838 37.500 1.79 0.00 37.24 3.32
2672 2917 4.751767 TCATTTTTGGAGCCAAGTGTTT 57.248 36.364 1.79 0.00 37.24 2.83
2730 2975 1.474330 CTTGGTTTCCATGGGCTACC 58.526 55.000 13.02 16.49 31.53 3.18
2744 2989 0.537371 GCTACCTTTGGGCACACACT 60.537 55.000 0.00 0.00 35.63 3.55
2751 2996 2.719531 TTGGGCACACACTAAACAGA 57.280 45.000 0.00 0.00 0.00 3.41
2758 3004 4.497507 GGCACACACTAAACAGACCTTTTC 60.498 45.833 0.00 0.00 0.00 2.29
2765 3011 6.890268 ACACTAAACAGACCTTTTCCTTTTCT 59.110 34.615 0.00 0.00 0.00 2.52
2798 3044 2.673326 GCTTTCATTCTTTCTGCCTGCC 60.673 50.000 0.00 0.00 0.00 4.85
2813 3059 1.359848 CTGCCGACTGTTCGCTAATT 58.640 50.000 0.00 0.00 44.43 1.40
2917 3163 4.455606 AGAATTCTCCATTAGGAAAGCCG 58.544 43.478 0.88 0.00 45.19 5.52
2969 3223 9.903682 CATTTGTGTTCATTTCAGTAAGATCTT 57.096 29.630 13.56 13.56 0.00 2.40
2983 3237 6.699204 CAGTAAGATCTTGAGTACGAATGCAT 59.301 38.462 18.47 0.00 0.00 3.96
2992 3246 4.098501 TGAGTACGAATGCATCTGTCTCAT 59.901 41.667 18.47 1.16 0.00 2.90
2994 3248 5.046529 AGTACGAATGCATCTGTCTCATTC 58.953 41.667 0.00 0.00 41.39 2.67
3003 3288 4.272991 GCATCTGTCTCATTCACATCCTTC 59.727 45.833 0.00 0.00 0.00 3.46
3004 3289 5.425630 CATCTGTCTCATTCACATCCTTCA 58.574 41.667 0.00 0.00 0.00 3.02
3005 3290 4.825422 TCTGTCTCATTCACATCCTTCAC 58.175 43.478 0.00 0.00 0.00 3.18
3006 3291 3.937706 CTGTCTCATTCACATCCTTCACC 59.062 47.826 0.00 0.00 0.00 4.02
3007 3292 3.327464 TGTCTCATTCACATCCTTCACCA 59.673 43.478 0.00 0.00 0.00 4.17
3008 3293 3.686726 GTCTCATTCACATCCTTCACCAC 59.313 47.826 0.00 0.00 0.00 4.16
3009 3294 3.012518 CTCATTCACATCCTTCACCACC 58.987 50.000 0.00 0.00 0.00 4.61
3010 3295 2.374839 TCATTCACATCCTTCACCACCA 59.625 45.455 0.00 0.00 0.00 4.17
3011 3296 3.010472 TCATTCACATCCTTCACCACCAT 59.990 43.478 0.00 0.00 0.00 3.55
3012 3297 4.227073 TCATTCACATCCTTCACCACCATA 59.773 41.667 0.00 0.00 0.00 2.74
3013 3298 4.860802 TTCACATCCTTCACCACCATAT 57.139 40.909 0.00 0.00 0.00 1.78
3014 3299 5.966853 TTCACATCCTTCACCACCATATA 57.033 39.130 0.00 0.00 0.00 0.86
3015 3300 5.966853 TCACATCCTTCACCACCATATAA 57.033 39.130 0.00 0.00 0.00 0.98
3016 3301 6.320434 TCACATCCTTCACCACCATATAAA 57.680 37.500 0.00 0.00 0.00 1.40
3017 3302 6.726379 TCACATCCTTCACCACCATATAAAA 58.274 36.000 0.00 0.00 0.00 1.52
3018 3303 7.178573 TCACATCCTTCACCACCATATAAAAA 58.821 34.615 0.00 0.00 0.00 1.94
3038 3323 4.434713 AAACGGTTATGTTCTCAATGCC 57.565 40.909 0.00 0.00 0.00 4.40
3039 3324 3.066291 ACGGTTATGTTCTCAATGCCA 57.934 42.857 0.00 0.00 0.00 4.92
3040 3325 3.620488 ACGGTTATGTTCTCAATGCCAT 58.380 40.909 0.00 0.00 0.00 4.40
3047 3332 7.981225 GGTTATGTTCTCAATGCCATATTTTGT 59.019 33.333 0.00 0.00 0.00 2.83
3052 3337 6.455360 TCTCAATGCCATATTTTGTCTTCC 57.545 37.500 0.00 0.00 0.00 3.46
3053 3338 5.360714 TCTCAATGCCATATTTTGTCTTCCC 59.639 40.000 0.00 0.00 0.00 3.97
3057 3342 2.758423 GCCATATTTTGTCTTCCCGGTT 59.242 45.455 0.00 0.00 0.00 4.44
3060 3345 4.461081 CCATATTTTGTCTTCCCGGTTTGA 59.539 41.667 0.00 0.00 0.00 2.69
3190 3475 3.996921 AATGCAGTGATCCTTGAGAGT 57.003 42.857 0.00 0.00 0.00 3.24
3214 3499 3.004752 AGTCCTGGTGCCATATCAAAC 57.995 47.619 0.00 0.00 0.00 2.93
3233 3518 4.420522 AACCCAACACCTTACTCGTTAA 57.579 40.909 0.00 0.00 0.00 2.01
3253 3538 7.557358 TCGTTAATACTCCTAGTTACCATGTCA 59.443 37.037 0.00 0.00 0.00 3.58
3263 3548 8.204160 TCCTAGTTACCATGTCATGTTTATGAG 58.796 37.037 11.84 2.82 43.66 2.90
3353 3638 8.891671 ATGTCTTATTTGTTTGCAAACTCAAT 57.108 26.923 35.09 31.10 45.99 2.57
3406 3691 4.881273 ACCGTTTGCATAATATTCTGCTCA 59.119 37.500 22.00 9.75 39.16 4.26
3412 3697 9.956720 GTTTGCATAATATTCTGCTCATTTAGT 57.043 29.630 22.00 0.00 39.16 2.24
3447 3732 5.772825 TTATGTTATCATCCTGCTTTGCC 57.227 39.130 0.00 0.00 35.70 4.52
3450 3735 2.760092 GTTATCATCCTGCTTTGCCCAA 59.240 45.455 0.00 0.00 0.00 4.12
3464 3749 4.888326 TTGCCCAAAGCTTGACATTAAT 57.112 36.364 0.00 0.00 44.23 1.40
3561 3853 7.781548 TGTCCTAACTGAACTTGTTACTTTC 57.218 36.000 0.00 0.00 0.00 2.62
3576 3868 1.541588 ACTTTCTGCCCATCGCTTTTC 59.458 47.619 0.00 0.00 38.78 2.29
3579 3871 1.614996 TCTGCCCATCGCTTTTCAAA 58.385 45.000 0.00 0.00 38.78 2.69
3662 3966 1.225855 TTGGAAGTGTGACATCGTGC 58.774 50.000 0.00 0.00 0.00 5.34
3676 3980 0.863144 TCGTGCGTGCCTTTCTTAAC 59.137 50.000 0.00 0.00 0.00 2.01
3700 4004 4.910195 TCAACTAACACATGCATCTCCTT 58.090 39.130 0.00 0.00 0.00 3.36
3710 4014 4.337555 ACATGCATCTCCTTGTTTATGCTC 59.662 41.667 0.00 0.00 43.98 4.26
3712 4016 4.592942 TGCATCTCCTTGTTTATGCTCTT 58.407 39.130 7.56 0.00 43.98 2.85
3713 4017 4.397103 TGCATCTCCTTGTTTATGCTCTTG 59.603 41.667 7.56 0.00 43.98 3.02
3726 4030 8.289618 TGTTTATGCTCTTGTTAACTTCACATC 58.710 33.333 7.22 0.00 0.00 3.06
3789 4094 6.372931 TGGGGATAGTTTATGCTATGCTTTT 58.627 36.000 0.00 0.00 39.02 2.27
3817 4122 7.280356 TGGTATGCTTATTCCCTCTAAACTTC 58.720 38.462 0.00 0.00 0.00 3.01
3823 4128 8.648693 TGCTTATTCCCTCTAAACTTCTATACC 58.351 37.037 0.00 0.00 0.00 2.73
3827 4132 8.798975 ATTCCCTCTAAACTTCTATACCATGA 57.201 34.615 0.00 0.00 0.00 3.07
3838 4143 8.143673 ACTTCTATACCATGATGATATGCAGT 57.856 34.615 0.00 0.00 0.00 4.40
3843 4148 3.244805 ACCATGATGATATGCAGTGAGGG 60.245 47.826 0.00 0.00 0.00 4.30
3852 4157 1.246056 TGCAGTGAGGGAGCAATTGC 61.246 55.000 23.05 23.05 42.49 3.56
3853 4158 1.246056 GCAGTGAGGGAGCAATTGCA 61.246 55.000 30.89 7.52 45.16 4.08
3902 4208 4.937201 GGAATCTTGGTTCCAGTTTGTT 57.063 40.909 7.72 0.00 45.63 2.83
3903 4209 4.871513 GGAATCTTGGTTCCAGTTTGTTC 58.128 43.478 7.72 0.00 45.63 3.18
3909 4215 3.138304 TGGTTCCAGTTTGTTCATCGAG 58.862 45.455 0.00 0.00 0.00 4.04
3923 4229 2.093500 TCATCGAGCAGTTGCATAGGTT 60.093 45.455 6.90 0.00 45.16 3.50
3983 4293 7.124347 TGCACGTTTAAGTTTCATTACTAGG 57.876 36.000 0.00 0.00 0.00 3.02
4040 4350 6.917477 ACAAACTAGTAAATGCATGTGTTGTG 59.083 34.615 0.00 0.28 0.00 3.33
4056 4366 0.614812 TGTGGATTAGCAGCAGCAGA 59.385 50.000 3.17 0.00 45.49 4.26
4102 4412 5.778161 TGCATGTTTGATGTTACTAGTCG 57.222 39.130 0.00 0.00 0.00 4.18
4137 4452 4.647611 CATTGTGTAGTTTGGGACTGGTA 58.352 43.478 0.00 0.00 39.48 3.25
4138 4453 4.986054 TTGTGTAGTTTGGGACTGGTAT 57.014 40.909 0.00 0.00 39.48 2.73
4139 4454 4.986054 TGTGTAGTTTGGGACTGGTATT 57.014 40.909 0.00 0.00 39.48 1.89
4149 4464 4.746466 TGGGACTGGTATTTGGACAAAAT 58.254 39.130 1.17 0.00 41.47 1.82
4150 4465 4.770010 TGGGACTGGTATTTGGACAAAATC 59.230 41.667 1.17 0.00 39.29 2.17
4170 4486 3.801698 TCTCTTGTGGATTAGCAGCATC 58.198 45.455 0.00 0.00 0.00 3.91
4173 4489 1.671979 TGTGGATTAGCAGCATCAGC 58.328 50.000 0.00 0.00 42.56 4.26
4195 4511 0.252881 TCCCAGCAGAGGAAGACCAT 60.253 55.000 0.00 0.00 38.94 3.55
4196 4512 0.107312 CCCAGCAGAGGAAGACCATG 60.107 60.000 0.00 0.00 38.94 3.66
4198 4514 1.406614 CCAGCAGAGGAAGACCATGAC 60.407 57.143 0.00 0.00 38.94 3.06
4201 4517 1.552337 GCAGAGGAAGACCATGACTCA 59.448 52.381 0.00 0.00 38.94 3.41
4204 4520 4.841422 CAGAGGAAGACCATGACTCATTT 58.159 43.478 0.00 0.00 38.94 2.32
4228 4544 6.541934 AGGGAACACTACTGTATTAAGGAC 57.458 41.667 0.00 0.00 0.00 3.85
4247 4563 9.678260 TTAAGGACGTATAGGATTATAGGAGAC 57.322 37.037 0.00 0.00 33.75 3.36
4283 4631 0.914644 ACATCATGCTAGGGTGTGCT 59.085 50.000 0.00 0.00 0.00 4.40
4361 4709 8.759641 CAAGTATGAAGAAATCTATGTTCTCCG 58.240 37.037 0.00 0.00 34.19 4.63
4393 4741 5.897824 CCTTTGTCTACCTATCTCCCTACAA 59.102 44.000 0.00 0.00 0.00 2.41
4449 4797 8.739972 AGTTATATTGTTGTGAATCAAGGTTCC 58.260 33.333 0.00 0.00 36.66 3.62
4463 4811 3.619233 AGGTTCCGAACAAAATTCGTG 57.381 42.857 13.23 0.89 40.04 4.35
4468 4816 4.203950 TCCGAACAAAATTCGTGAACAG 57.796 40.909 8.12 0.00 40.04 3.16
4508 4856 3.896888 TCATTCCCAACAACTGAATGCTT 59.103 39.130 6.59 0.00 43.11 3.91
4510 4858 1.962807 TCCCAACAACTGAATGCTTGG 59.037 47.619 0.00 0.00 34.27 3.61
4520 4868 5.796424 ACTGAATGCTTGGTGAAGAAAAT 57.204 34.783 0.00 0.00 0.00 1.82
4528 4876 6.924111 TGCTTGGTGAAGAAAATAGGAAATC 58.076 36.000 0.00 0.00 0.00 2.17
4531 4879 7.704047 GCTTGGTGAAGAAAATAGGAAATCATC 59.296 37.037 0.00 0.00 0.00 2.92
4536 4884 9.346725 GTGAAGAAAATAGGAAATCATCAACAC 57.653 33.333 0.00 0.00 0.00 3.32
4547 4896 9.865321 AGGAAATCATCAACACAAAAGATATTG 57.135 29.630 0.00 0.00 36.37 1.90
4560 4909 5.567138 AAAGATATTGGCTACTTGTGCAC 57.433 39.130 10.75 10.75 0.00 4.57
4566 4915 1.133945 TGGCTACTTGTGCACCTTCAA 60.134 47.619 15.69 0.26 0.00 2.69
4570 4919 3.751175 GCTACTTGTGCACCTTCAATGTA 59.249 43.478 15.69 6.99 0.00 2.29
4573 4922 5.125100 ACTTGTGCACCTTCAATGTAATG 57.875 39.130 15.69 0.00 0.00 1.90
4574 4923 4.022068 ACTTGTGCACCTTCAATGTAATGG 60.022 41.667 15.69 0.00 0.00 3.16
4578 4927 3.193267 TGCACCTTCAATGTAATGGCTTC 59.807 43.478 0.00 0.00 0.00 3.86
4615 4964 9.425248 AATAAAATGGGAATCTTAGATGCAGAA 57.575 29.630 2.24 0.00 0.00 3.02
4630 4979 4.640771 TGCAGAAAAGGTTCTAGATGGT 57.359 40.909 0.00 0.00 42.45 3.55
4651 5000 5.176592 GGTACAATTGTTGTCTCTAGGTCC 58.823 45.833 17.78 0.00 44.12 4.46
4653 5002 4.899502 ACAATTGTTGTCTCTAGGTCCAG 58.100 43.478 4.92 0.00 40.56 3.86
4662 5011 5.091552 TGTCTCTAGGTCCAGTTTTGGTAT 58.908 41.667 0.00 0.00 45.26 2.73
4686 5035 8.677148 ATAGTATAAAGGCTACAATTGTGGTG 57.323 34.615 21.42 11.71 0.00 4.17
4707 5061 8.830580 GTGGTGTACTAATATAGACGACACTTA 58.169 37.037 14.96 7.71 37.46 2.24
4723 5077 7.256286 ACGACACTTATTGTTCTACCTGTATC 58.744 38.462 0.00 0.00 39.17 2.24
4732 5086 6.709018 TGTTCTACCTGTATCAATCATCGA 57.291 37.500 0.00 0.00 0.00 3.59
4733 5087 6.739112 TGTTCTACCTGTATCAATCATCGAG 58.261 40.000 0.00 0.00 0.00 4.04
4734 5088 6.546034 TGTTCTACCTGTATCAATCATCGAGA 59.454 38.462 0.00 0.00 0.00 4.04
4735 5089 7.231519 TGTTCTACCTGTATCAATCATCGAGAT 59.768 37.037 0.00 0.00 39.09 2.75
4736 5090 7.150783 TCTACCTGTATCAATCATCGAGATG 57.849 40.000 6.74 6.74 36.96 2.90
4784 5140 8.230472 ACAGTTTCTCTTGATGATCTTTTGTT 57.770 30.769 0.00 0.00 0.00 2.83
4864 5222 8.331931 ACCTGGATTCCTGTAATTATACTCAA 57.668 34.615 0.00 0.00 32.98 3.02
4873 5231 9.209048 TCCTGTAATTATACTCAAAGCTCCTTA 57.791 33.333 0.00 0.00 32.98 2.69
4924 5285 3.916172 TGTTACTTATCGTTCGTGCACTC 59.084 43.478 16.19 4.46 0.00 3.51
4929 5290 1.275471 ATCGTTCGTGCACTCGTGTG 61.275 55.000 16.19 13.13 46.37 3.82
4938 5299 3.272766 CACTCGTGTGCTCTGTCAA 57.727 52.632 4.47 0.00 37.38 3.18
4939 5300 0.855349 CACTCGTGTGCTCTGTCAAC 59.145 55.000 4.47 0.00 37.38 3.18
4949 5310 3.984633 GTGCTCTGTCAACTACTCTTCAC 59.015 47.826 0.00 0.00 0.00 3.18
4951 5312 5.048643 GTGCTCTGTCAACTACTCTTCACTA 60.049 44.000 0.00 0.00 0.00 2.74
4965 5326 7.484035 ACTCTTCACTAATGAAAGTCACAAC 57.516 36.000 0.00 0.00 44.28 3.32
4973 5334 5.971895 AATGAAAGTCACAACATTGTTGC 57.028 34.783 25.60 12.26 39.91 4.17
4994 5355 3.854784 GCTGCTTTGACAATTCAGTGTCC 60.855 47.826 14.70 0.00 46.13 4.02
5030 5391 9.869757 GTTTACTTATGCCCTACAATTTCATTT 57.130 29.630 0.00 0.00 0.00 2.32
5101 5463 1.671979 TGCTATGCTTGCAGATGGAC 58.328 50.000 0.87 0.00 35.31 4.02
5104 5466 2.223433 GCTATGCTTGCAGATGGACAAC 60.223 50.000 0.87 0.00 0.00 3.32
5188 5550 4.025145 GGTCAGTTCAGACAAAGTAAACGG 60.025 45.833 0.00 0.00 40.29 4.44
5210 5572 9.862149 AACGGAATGGAAATAAAGGTATAGATT 57.138 29.630 0.00 0.00 0.00 2.40
5221 5583 1.067776 GGTATAGATTCTGACCGCGGG 60.068 57.143 31.76 12.37 0.00 6.13
5224 5586 1.766494 TAGATTCTGACCGCGGGTTA 58.234 50.000 31.76 14.13 35.25 2.85
5275 5640 7.951591 TGTCGTGAAATATGGATTCTCTATGA 58.048 34.615 0.00 0.00 0.00 2.15
5303 5668 2.629336 AGCTCTAATGGTTAGCTGGC 57.371 50.000 0.00 0.00 44.67 4.85
5309 5674 3.973973 TCTAATGGTTAGCTGGCTATGGT 59.026 43.478 0.00 0.00 33.23 3.55
5319 5684 5.135508 AGCTGGCTATGGTTACTATAACG 57.864 43.478 0.00 0.00 0.00 3.18
5322 5687 5.477607 TGGCTATGGTTACTATAACGCAT 57.522 39.130 3.32 7.42 0.00 4.73
5340 5705 3.452474 GCATCAGCGTTAGATGAGAACT 58.548 45.455 14.98 0.00 46.68 3.01
5349 5714 6.920758 AGCGTTAGATGAGAACTGATTATGTC 59.079 38.462 0.00 0.00 0.00 3.06
5350 5715 6.129326 GCGTTAGATGAGAACTGATTATGTCG 60.129 42.308 0.00 0.00 0.00 4.35
5355 5726 7.495901 AGATGAGAACTGATTATGTCGACATT 58.504 34.615 34.06 18.98 37.76 2.71
5358 5729 5.043903 AGAACTGATTATGTCGACATTCGG 58.956 41.667 34.06 29.72 40.88 4.30
5370 5741 1.401905 GACATTCGGAGGGAAATGTGC 59.598 52.381 5.53 0.00 38.36 4.57
5378 5749 2.159379 GGAGGGAAATGTGCATTCGTTC 60.159 50.000 0.00 0.00 0.00 3.95
5383 5754 4.161333 GGAAATGTGCATTCGTTCAAGAG 58.839 43.478 0.00 0.00 0.00 2.85
5431 5810 6.934645 TGCGAACCTAATTCTTATTCCTATGG 59.065 38.462 0.00 0.00 34.88 2.74
5451 5830 9.480053 CCTATGGAAAATTACATAAGCAATTGG 57.520 33.333 7.72 0.00 33.75 3.16
5454 5833 8.770438 TGGAAAATTACATAAGCAATTGGAAC 57.230 30.769 7.72 0.00 0.00 3.62
5455 5834 8.370940 TGGAAAATTACATAAGCAATTGGAACA 58.629 29.630 7.72 0.00 0.00 3.18
5456 5835 9.382275 GGAAAATTACATAAGCAATTGGAACAT 57.618 29.630 7.72 0.00 39.30 2.71
5490 5869 3.795877 ACAGTTCCTTTGCAACCAAATG 58.204 40.909 0.00 4.41 39.98 2.32
5521 5900 8.621532 TCATTCATACTATGTTAAATGGCTCC 57.378 34.615 8.20 0.00 0.00 4.70
5523 5902 9.071276 CATTCATACTATGTTAAATGGCTCCTT 57.929 33.333 0.00 0.00 0.00 3.36
5536 5915 9.849166 TTAAATGGCTCCTTTTAAATTCGTTAG 57.151 29.630 13.87 0.00 34.69 2.34
5539 5918 7.141100 TGGCTCCTTTTAAATTCGTTAGAAG 57.859 36.000 0.00 0.00 40.09 2.85
5543 5922 9.841880 GCTCCTTTTAAATTCGTTAGAAGAAAT 57.158 29.630 0.00 0.00 40.09 2.17
5591 5972 6.071728 CCAGAGAAGTGCTTGGAAATGTTATT 60.072 38.462 0.00 0.00 0.00 1.40
5661 6043 9.685276 TGTTAGACAATTGGAGATATGAACAAT 57.315 29.630 10.83 0.00 35.24 2.71
5665 6047 9.911788 AGACAATTGGAGATATGAACAATTAGT 57.088 29.630 10.83 0.00 40.43 2.24
5670 6052 8.893219 TTGGAGATATGAACAATTAGTAGCTG 57.107 34.615 0.00 0.00 0.00 4.24
5671 6053 6.931281 TGGAGATATGAACAATTAGTAGCTGC 59.069 38.462 0.00 0.00 0.00 5.25
5672 6054 6.931281 GGAGATATGAACAATTAGTAGCTGCA 59.069 38.462 4.12 0.00 0.00 4.41
5673 6055 7.095439 GGAGATATGAACAATTAGTAGCTGCAC 60.095 40.741 4.12 0.00 0.00 4.57
5674 6056 7.504403 AGATATGAACAATTAGTAGCTGCACT 58.496 34.615 4.12 6.21 0.00 4.40
5675 6057 7.989741 AGATATGAACAATTAGTAGCTGCACTT 59.010 33.333 4.12 0.00 0.00 3.16
5676 6058 6.824305 ATGAACAATTAGTAGCTGCACTTT 57.176 33.333 4.12 0.00 0.00 2.66
5677 6059 6.633500 TGAACAATTAGTAGCTGCACTTTT 57.367 33.333 4.12 0.00 0.00 2.27
5678 6060 7.038154 TGAACAATTAGTAGCTGCACTTTTT 57.962 32.000 4.12 0.00 0.00 1.94
5697 6079 3.625314 TTTTTGCCAGACCCCAAGT 57.375 47.368 0.00 0.00 0.00 3.16
5698 6080 1.872773 TTTTTGCCAGACCCCAAGTT 58.127 45.000 0.00 0.00 0.00 2.66
5699 6081 2.757894 TTTTGCCAGACCCCAAGTTA 57.242 45.000 0.00 0.00 0.00 2.24
5700 6082 2.286365 TTTGCCAGACCCCAAGTTAG 57.714 50.000 0.00 0.00 0.00 2.34
5701 6083 0.404040 TTGCCAGACCCCAAGTTAGG 59.596 55.000 0.00 0.00 0.00 2.69
5702 6084 1.378646 GCCAGACCCCAAGTTAGGC 60.379 63.158 0.00 0.00 40.21 3.93
5703 6085 2.074967 CCAGACCCCAAGTTAGGCA 58.925 57.895 0.00 0.00 0.00 4.75
5704 6086 0.404040 CCAGACCCCAAGTTAGGCAA 59.596 55.000 0.00 0.00 0.00 4.52
5705 6087 1.614317 CCAGACCCCAAGTTAGGCAAG 60.614 57.143 0.00 0.00 0.00 4.01
5706 6088 0.038310 AGACCCCAAGTTAGGCAAGC 59.962 55.000 0.00 0.00 0.00 4.01
5707 6089 0.038310 GACCCCAAGTTAGGCAAGCT 59.962 55.000 0.00 0.00 0.00 3.74
5708 6090 0.251341 ACCCCAAGTTAGGCAAGCTG 60.251 55.000 0.00 0.00 0.00 4.24
5709 6091 0.251341 CCCCAAGTTAGGCAAGCTGT 60.251 55.000 0.00 0.00 0.00 4.40
5710 6092 1.168714 CCCAAGTTAGGCAAGCTGTC 58.831 55.000 0.00 0.00 0.00 3.51
5711 6093 1.545428 CCCAAGTTAGGCAAGCTGTCA 60.545 52.381 0.00 0.00 0.00 3.58
5712 6094 2.440409 CCAAGTTAGGCAAGCTGTCAT 58.560 47.619 0.00 0.00 0.00 3.06
5713 6095 2.163010 CCAAGTTAGGCAAGCTGTCATG 59.837 50.000 0.00 0.00 0.00 3.07
5714 6096 2.816087 CAAGTTAGGCAAGCTGTCATGT 59.184 45.455 0.00 0.00 0.00 3.21
5715 6097 2.430465 AGTTAGGCAAGCTGTCATGTG 58.570 47.619 0.00 0.00 0.00 3.21
5716 6098 2.154462 GTTAGGCAAGCTGTCATGTGT 58.846 47.619 0.00 0.00 0.00 3.72
5717 6099 2.099141 TAGGCAAGCTGTCATGTGTC 57.901 50.000 0.00 0.00 0.00 3.67
5718 6100 0.109153 AGGCAAGCTGTCATGTGTCA 59.891 50.000 0.00 0.00 0.00 3.58
5719 6101 0.520404 GGCAAGCTGTCATGTGTCAG 59.480 55.000 0.00 3.39 34.96 3.51
5720 6102 1.233019 GCAAGCTGTCATGTGTCAGT 58.767 50.000 8.59 0.00 34.46 3.41
5721 6103 1.196354 GCAAGCTGTCATGTGTCAGTC 59.804 52.381 8.59 2.73 34.46 3.51
5722 6104 2.486918 CAAGCTGTCATGTGTCAGTCA 58.513 47.619 8.59 0.00 34.46 3.41
5723 6105 2.160822 AGCTGTCATGTGTCAGTCAC 57.839 50.000 8.59 0.00 46.31 3.67
5739 6121 7.693951 GTGTCAGTCACATGTTTGATTTATAGC 59.306 37.037 0.00 0.00 45.51 2.97
5740 6122 7.607607 TGTCAGTCACATGTTTGATTTATAGCT 59.392 33.333 0.00 0.00 0.00 3.32
5741 6123 7.907045 GTCAGTCACATGTTTGATTTATAGCTG 59.093 37.037 0.00 0.00 0.00 4.24
5742 6124 6.690098 CAGTCACATGTTTGATTTATAGCTGC 59.310 38.462 0.00 0.00 0.00 5.25
5743 6125 6.375174 AGTCACATGTTTGATTTATAGCTGCA 59.625 34.615 1.02 0.00 0.00 4.41
5744 6126 6.470235 GTCACATGTTTGATTTATAGCTGCAC 59.530 38.462 1.02 0.00 0.00 4.57
5745 6127 5.745294 CACATGTTTGATTTATAGCTGCACC 59.255 40.000 1.02 0.00 0.00 5.01
5746 6128 5.653769 ACATGTTTGATTTATAGCTGCACCT 59.346 36.000 1.02 0.00 0.00 4.00
5747 6129 5.565592 TGTTTGATTTATAGCTGCACCTG 57.434 39.130 1.02 0.00 0.00 4.00
5748 6130 5.009631 TGTTTGATTTATAGCTGCACCTGT 58.990 37.500 1.02 0.00 0.00 4.00
5749 6131 5.476599 TGTTTGATTTATAGCTGCACCTGTT 59.523 36.000 1.02 0.00 0.00 3.16
5750 6132 5.565592 TTGATTTATAGCTGCACCTGTTG 57.434 39.130 1.02 0.00 0.00 3.33
5758 6140 4.012895 GCACCTGTTGCCGTGTCG 62.013 66.667 0.00 0.00 46.63 4.35
5759 6141 4.012895 CACCTGTTGCCGTGTCGC 62.013 66.667 0.00 0.00 0.00 5.19
5762 6144 3.767230 CTGTTGCCGTGTCGCGAG 61.767 66.667 10.24 0.00 44.77 5.03
5763 6145 4.273257 TGTTGCCGTGTCGCGAGA 62.273 61.111 10.24 4.94 44.77 4.04
5764 6146 2.809601 GTTGCCGTGTCGCGAGAT 60.810 61.111 10.24 0.00 45.19 2.75
5765 6147 2.048597 TTGCCGTGTCGCGAGATT 60.049 55.556 10.24 0.00 45.19 2.40
5766 6148 2.092291 TTGCCGTGTCGCGAGATTC 61.092 57.895 10.24 0.00 45.19 2.52
5836 6218 4.388577 AGTTCTCCTTGGGCTTTACAAT 57.611 40.909 0.00 0.00 0.00 2.71
5843 6225 3.069443 CCTTGGGCTTTACAATGTGTGTT 59.931 43.478 0.00 0.00 41.98 3.32
5865 6247 6.663093 TGTTTACAATTCTGATATTGTGCCCT 59.337 34.615 19.33 4.49 45.63 5.19
5897 6279 6.670695 ATTATTTCTTGTTCAAGCACCCTT 57.329 33.333 7.58 0.00 0.00 3.95
5908 6293 5.818678 TCAAGCACCCTTTAGAAACTCTA 57.181 39.130 0.00 0.00 0.00 2.43
5928 6313 8.268850 ACTCTAAAATGAATAATGTGCGACTT 57.731 30.769 0.00 0.00 0.00 3.01
5932 6317 9.767684 CTAAAATGAATAATGTGCGACTTTGTA 57.232 29.630 0.00 0.00 0.00 2.41
5990 6375 1.000283 CCAGATCACATAGCCCGAGAC 60.000 57.143 0.00 0.00 0.00 3.36
6097 6483 3.428725 CGAAGGTCACTCTCCATCTCTTG 60.429 52.174 0.00 0.00 0.00 3.02
6126 6519 5.741982 AGACAATTGTTTTTACAGCGTTGTC 59.258 36.000 13.36 16.62 42.55 3.18
6240 6633 7.487822 TCAAAAAGTAGATGACCAGAGATCT 57.512 36.000 0.00 0.00 33.43 2.75
6301 6694 1.202817 GGGAGAGAAGTCAGAACGACC 59.797 57.143 0.00 0.00 46.69 4.79
6331 6724 2.292292 GTCCGGCAAAGCAAAGAAAGTA 59.708 45.455 0.00 0.00 0.00 2.24
6347 6740 0.038455 AGTACTGTGAGCCGAGGAGT 59.962 55.000 0.00 0.00 0.00 3.85
6401 6794 2.203640 TGGTGGTCGAGGCTCTGT 60.204 61.111 13.50 0.00 0.00 3.41
6671 7064 2.947532 CGAGCAGGCACAGGGAGAA 61.948 63.158 0.00 0.00 0.00 2.87
6680 7073 4.020617 CAGGGAGAAGCGGCACCA 62.021 66.667 1.45 0.00 0.00 4.17
6743 7136 1.876497 GCCCTCGCCAATTTTCTGCA 61.876 55.000 0.00 0.00 0.00 4.41
6756 7149 4.829064 TTTTCTGCATACGCTGAGTTTT 57.171 36.364 0.00 0.00 45.47 2.43
6757 7150 4.829064 TTTCTGCATACGCTGAGTTTTT 57.171 36.364 0.00 0.00 45.47 1.94
6802 7196 5.341617 GCGTAGACTGTATAATATGGGAGC 58.658 45.833 0.00 0.00 0.00 4.70
6803 7197 5.125739 GCGTAGACTGTATAATATGGGAGCT 59.874 44.000 0.00 0.00 0.00 4.09
6833 7227 7.627585 AGTTTTCATCACATGTTCATTTTCG 57.372 32.000 0.00 0.00 0.00 3.46
6841 7235 6.511416 TCACATGTTCATTTTCGGAATGTTT 58.489 32.000 0.00 0.00 0.00 2.83
6842 7236 6.420306 TCACATGTTCATTTTCGGAATGTTTG 59.580 34.615 0.00 7.89 0.00 2.93
6843 7237 6.200665 CACATGTTCATTTTCGGAATGTTTGT 59.799 34.615 0.00 8.31 0.00 2.83
6844 7238 6.760770 ACATGTTCATTTTCGGAATGTTTGTT 59.239 30.769 0.00 0.00 0.00 2.83
6855 7249 8.568732 TTCGGAATGTTTGTTGTTTTTAGATC 57.431 30.769 0.00 0.00 0.00 2.75
6876 7275 4.872664 TCAAAAAGGACGTTTTGTTGTGT 58.127 34.783 18.19 0.00 44.97 3.72
6880 7279 2.650322 AGGACGTTTTGTTGTGTGGAT 58.350 42.857 0.00 0.00 0.00 3.41
6884 7283 2.223386 ACGTTTTGTTGTGTGGATTCGG 60.223 45.455 0.00 0.00 0.00 4.30
6905 7305 0.609131 CCGGTGGTTCAGCCTTCAAT 60.609 55.000 0.00 0.00 38.35 2.57
6910 7310 4.585879 GGTGGTTCAGCCTTCAATAGTTA 58.414 43.478 0.00 0.00 38.35 2.24
6918 7318 7.553881 TCAGCCTTCAATAGTTAATAACTGC 57.446 36.000 15.34 8.31 42.84 4.40
6924 7324 8.207545 CCTTCAATAGTTAATAACTGCTCTCCT 58.792 37.037 15.34 0.00 42.84 3.69
6929 7329 6.852420 AGTTAATAACTGCTCTCCTGTGTA 57.148 37.500 4.66 0.00 41.01 2.90
6930 7330 7.425224 AGTTAATAACTGCTCTCCTGTGTAT 57.575 36.000 4.66 0.00 41.01 2.29
6931 7331 8.534954 AGTTAATAACTGCTCTCCTGTGTATA 57.465 34.615 4.66 0.00 41.01 1.47
6932 7332 8.414778 AGTTAATAACTGCTCTCCTGTGTATAC 58.585 37.037 4.66 0.00 41.01 1.47
6933 7333 6.791867 AATAACTGCTCTCCTGTGTATACA 57.208 37.500 0.08 0.08 35.08 2.29
6956 7375 2.923655 CAAGCGATTCTGCTCGTTTCTA 59.076 45.455 4.01 0.00 46.60 2.10
6959 7378 2.028165 GCGATTCTGCTCGTTTCTACAC 59.972 50.000 0.00 0.00 40.73 2.90
6987 7406 5.947228 TGCAAGTGAAATGAGAACCTTAG 57.053 39.130 0.00 0.00 0.00 2.18
6991 7410 6.515696 GCAAGTGAAATGAGAACCTTAGCTTT 60.516 38.462 0.00 0.00 0.00 3.51
7005 7424 5.897250 ACCTTAGCTTTCCTTTTTCTTCCAA 59.103 36.000 0.00 0.00 0.00 3.53
7008 7427 5.219343 AGCTTTCCTTTTTCTTCCAATGG 57.781 39.130 0.00 0.00 0.00 3.16
7012 7431 6.017934 GCTTTCCTTTTTCTTCCAATGGTTTC 60.018 38.462 0.00 0.00 0.00 2.78
7017 7436 8.763601 TCCTTTTTCTTCCAATGGTTTCTTTTA 58.236 29.630 0.00 0.00 0.00 1.52
7022 7442 9.726438 TTTCTTCCAATGGTTTCTTTTAACAAA 57.274 25.926 0.00 0.00 0.00 2.83
7038 7458 9.881529 CTTTTAACAAATGAAATGGGAATGTTG 57.118 29.630 0.00 0.00 32.39 3.33
7042 7462 6.590068 ACAAATGAAATGGGAATGTTGTCAA 58.410 32.000 0.00 0.00 0.00 3.18
7046 7466 7.910441 ATGAAATGGGAATGTTGTCAATTTC 57.090 32.000 0.00 0.00 35.14 2.17
7056 7476 8.772705 GGAATGTTGTCAATTTCATGCTTAAAA 58.227 29.630 11.24 0.00 0.00 1.52
7059 7479 8.659925 TGTTGTCAATTTCATGCTTAAAATGT 57.340 26.923 0.00 0.00 0.00 2.71
7067 7487 5.461032 TCATGCTTAAAATGTTTTCGGGT 57.539 34.783 0.00 0.00 0.00 5.28
7079 7499 5.340439 TGTTTTCGGGTATTGTTTGGTTT 57.660 34.783 0.00 0.00 0.00 3.27
7124 7547 2.493030 CGTTATCGCGGGTCTGGT 59.507 61.111 6.13 0.00 0.00 4.00
7132 7555 0.672401 CGCGGGTCTGGTAAATGTGT 60.672 55.000 0.00 0.00 0.00 3.72
7133 7556 1.404449 CGCGGGTCTGGTAAATGTGTA 60.404 52.381 0.00 0.00 0.00 2.90
7142 7565 6.708949 GGTCTGGTAAATGTGTAGTTTCTTCA 59.291 38.462 0.00 0.00 0.00 3.02
7148 7571 9.394477 GGTAAATGTGTAGTTTCTTCATCAAAC 57.606 33.333 0.00 0.00 34.47 2.93
7152 7575 5.822519 TGTGTAGTTTCTTCATCAAACAGCT 59.177 36.000 0.00 0.00 36.38 4.24
7153 7576 6.017934 TGTGTAGTTTCTTCATCAAACAGCTC 60.018 38.462 0.00 0.00 36.38 4.09
7164 7587 3.271729 TCAAACAGCTCAACACCGTTAA 58.728 40.909 0.00 0.00 0.00 2.01
7165 7588 3.690139 TCAAACAGCTCAACACCGTTAAA 59.310 39.130 0.00 0.00 0.00 1.52
7166 7589 4.156190 TCAAACAGCTCAACACCGTTAAAA 59.844 37.500 0.00 0.00 0.00 1.52
7167 7590 3.963383 ACAGCTCAACACCGTTAAAAG 57.037 42.857 0.00 0.00 0.00 2.27
7168 7591 2.032924 ACAGCTCAACACCGTTAAAAGC 59.967 45.455 0.00 0.00 0.00 3.51
7170 7593 2.949644 AGCTCAACACCGTTAAAAGCTT 59.050 40.909 0.00 0.00 35.17 3.74
7171 7594 3.042887 GCTCAACACCGTTAAAAGCTTG 58.957 45.455 0.00 0.00 0.00 4.01
7176 7599 3.215975 ACACCGTTAAAAGCTTGCCTTA 58.784 40.909 0.00 0.00 32.20 2.69
7194 7617 8.688747 TTGCCTTATTTTTCCACAAAATTCAT 57.311 26.923 0.00 0.00 31.39 2.57
7277 7700 5.065914 GGGAGCTTGCATGTTAGATCATTA 58.934 41.667 13.77 0.00 0.00 1.90
7301 7725 4.153475 TGCGTGGTAGATTTAGCTGTTTTC 59.847 41.667 0.00 0.00 0.00 2.29
7302 7726 4.392138 GCGTGGTAGATTTAGCTGTTTTCT 59.608 41.667 0.00 0.00 0.00 2.52
7313 7737 7.986085 TTTAGCTGTTTTCTAGAGCAAGATT 57.014 32.000 0.00 0.00 45.27 2.40
7337 7761 5.997746 TGCTTTAACAATCTCTGCTAGTGTT 59.002 36.000 0.00 0.00 0.00 3.32
7339 7763 7.018235 GCTTTAACAATCTCTGCTAGTGTTTC 58.982 38.462 0.00 0.00 0.00 2.78
7340 7764 7.307989 GCTTTAACAATCTCTGCTAGTGTTTCA 60.308 37.037 0.00 0.00 0.00 2.69
7341 7765 5.931441 AACAATCTCTGCTAGTGTTTCAC 57.069 39.130 0.00 0.00 34.10 3.18
7343 7767 4.993584 ACAATCTCTGCTAGTGTTTCACTG 59.006 41.667 11.92 4.43 45.01 3.66
7344 7768 4.881019 ATCTCTGCTAGTGTTTCACTGT 57.119 40.909 11.92 0.00 45.01 3.55
7345 7769 4.244425 TCTCTGCTAGTGTTTCACTGTC 57.756 45.455 11.92 4.93 45.01 3.51
7347 7771 4.099419 TCTCTGCTAGTGTTTCACTGTCAA 59.901 41.667 11.92 0.00 45.01 3.18
7349 7773 4.751600 TCTGCTAGTGTTTCACTGTCAATG 59.248 41.667 11.92 1.38 45.01 2.82
7350 7774 3.814842 TGCTAGTGTTTCACTGTCAATGG 59.185 43.478 11.92 0.00 45.01 3.16
7351 7775 3.815401 GCTAGTGTTTCACTGTCAATGGT 59.185 43.478 11.92 0.00 45.01 3.55
7352 7776 4.994852 GCTAGTGTTTCACTGTCAATGGTA 59.005 41.667 11.92 0.00 45.01 3.25
7353 7777 5.120830 GCTAGTGTTTCACTGTCAATGGTAG 59.879 44.000 11.92 0.71 45.01 3.18
7354 7778 5.290493 AGTGTTTCACTGTCAATGGTAGA 57.710 39.130 1.44 0.00 43.63 2.59
7355 7779 5.680619 AGTGTTTCACTGTCAATGGTAGAA 58.319 37.500 1.44 0.00 43.63 2.10
7441 7867 1.739466 CTGGCTTTAGCGATGCTTGAA 59.261 47.619 0.00 0.00 43.26 2.69
7468 7894 2.224744 TGTGAGAAAACCTGGCATAGCA 60.225 45.455 0.00 0.00 0.00 3.49
7469 7895 2.421424 GTGAGAAAACCTGGCATAGCAG 59.579 50.000 0.00 0.00 0.00 4.24
7470 7896 1.403323 GAGAAAACCTGGCATAGCAGC 59.597 52.381 0.00 0.00 0.00 5.25
7471 7897 1.176527 GAAAACCTGGCATAGCAGCA 58.823 50.000 0.00 0.00 35.83 4.41
7472 7898 0.890683 AAAACCTGGCATAGCAGCAC 59.109 50.000 0.00 0.00 35.83 4.40
7473 7899 0.038744 AAACCTGGCATAGCAGCACT 59.961 50.000 0.00 0.00 35.83 4.40
7474 7900 0.393537 AACCTGGCATAGCAGCACTC 60.394 55.000 0.00 0.00 35.83 3.51
7475 7901 1.525535 CCTGGCATAGCAGCACTCC 60.526 63.158 0.00 0.00 35.83 3.85
7476 7902 1.525535 CTGGCATAGCAGCACTCCC 60.526 63.158 0.00 0.00 35.83 4.30
7477 7903 2.203266 GGCATAGCAGCACTCCCC 60.203 66.667 0.00 0.00 35.83 4.81
7478 7904 2.591753 GCATAGCAGCACTCCCCA 59.408 61.111 0.00 0.00 0.00 4.96
7479 7905 1.525535 GCATAGCAGCACTCCCCAG 60.526 63.158 0.00 0.00 0.00 4.45
7480 7906 1.525535 CATAGCAGCACTCCCCAGC 60.526 63.158 0.00 0.00 0.00 4.85
7481 7907 1.692042 ATAGCAGCACTCCCCAGCT 60.692 57.895 0.00 0.00 42.94 4.24
7482 7908 1.694133 ATAGCAGCACTCCCCAGCTC 61.694 60.000 0.00 0.00 39.50 4.09
7483 7909 2.812218 TAGCAGCACTCCCCAGCTCT 62.812 60.000 0.00 0.00 39.50 4.09
7484 7910 2.583520 CAGCACTCCCCAGCTCTC 59.416 66.667 0.00 0.00 39.50 3.20
7485 7911 2.686835 AGCACTCCCCAGCTCTCC 60.687 66.667 0.00 0.00 36.00 3.71
7486 7912 3.791586 GCACTCCCCAGCTCTCCC 61.792 72.222 0.00 0.00 0.00 4.30
7487 7913 3.086600 CACTCCCCAGCTCTCCCC 61.087 72.222 0.00 0.00 0.00 4.81
7488 7914 3.288381 ACTCCCCAGCTCTCCCCT 61.288 66.667 0.00 0.00 0.00 4.79
7489 7915 2.445654 CTCCCCAGCTCTCCCCTC 60.446 72.222 0.00 0.00 0.00 4.30
7490 7916 3.284251 TCCCCAGCTCTCCCCTCA 61.284 66.667 0.00 0.00 0.00 3.86
7491 7917 2.285668 CCCCAGCTCTCCCCTCAA 60.286 66.667 0.00 0.00 0.00 3.02
7492 7918 1.925455 CCCCAGCTCTCCCCTCAAA 60.925 63.158 0.00 0.00 0.00 2.69
7493 7919 1.500783 CCCCAGCTCTCCCCTCAAAA 61.501 60.000 0.00 0.00 0.00 2.44
7494 7920 0.405585 CCCAGCTCTCCCCTCAAAAA 59.594 55.000 0.00 0.00 0.00 1.94
7548 7974 0.389391 AATAGTCCCACATCGCTCGG 59.611 55.000 0.00 0.00 0.00 4.63
7569 7995 3.541713 GGAGGAGCTACCCTGCCG 61.542 72.222 0.00 0.00 38.55 5.69
7598 8024 0.037232 GTATAGGCCGGCACCATCTC 60.037 60.000 30.85 8.87 0.00 2.75
7600 8026 3.858220 TATAGGCCGGCACCATCTCCA 62.858 57.143 30.85 1.27 0.00 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
203 211 2.035155 TCCTCGTCGGAGAAGCCA 59.965 61.111 0.00 0.00 43.27 4.75
277 285 2.123077 CGATCTCCTCCAGGGCCT 60.123 66.667 0.00 0.00 35.41 5.19
344 352 1.759293 CGTCCTCATCGTCGTCGCTA 61.759 60.000 0.00 0.00 36.96 4.26
454 472 2.737932 GAACCGCGTGTAGTCACCGT 62.738 60.000 4.92 0.00 41.09 4.83
455 473 2.049802 AACCGCGTGTAGTCACCG 60.050 61.111 4.92 0.00 41.09 4.94
456 474 0.523072 TAGAACCGCGTGTAGTCACC 59.477 55.000 4.92 0.00 41.09 4.02
594 655 2.604614 GCAAACTTCGGCGAGTTCATTT 60.605 45.455 19.64 10.98 38.86 2.32
698 759 2.971452 GGGATAGATCGGACGGCC 59.029 66.667 0.00 0.00 0.00 6.13
724 785 2.208431 GAACGGAATCCAGCAGATCTG 58.792 52.381 18.84 18.84 42.49 2.90
741 802 1.605712 CGTCACTGGGAGAACTGGAAC 60.606 57.143 0.00 0.00 0.00 3.62
1112 1174 1.064946 CGCAGAGAACGAGCCCTAG 59.935 63.158 0.00 0.00 0.00 3.02
1129 1191 2.732094 AGACCGAACGAAACCGCG 60.732 61.111 0.00 0.00 37.29 6.46
1155 1217 0.743345 AATTAGAAGCCGGCCGTGTC 60.743 55.000 26.15 17.52 0.00 3.67
1214 1276 8.385111 GCACAACGATAAATTACAGCTAAACTA 58.615 33.333 0.00 0.00 0.00 2.24
1220 1282 3.063452 CGGCACAACGATAAATTACAGCT 59.937 43.478 0.00 0.00 35.47 4.24
1241 1303 0.933097 CTCGAATCAATCCAGGCACG 59.067 55.000 0.00 0.00 0.00 5.34
1266 1328 1.254026 AGTCGCACCTACAGCTACAA 58.746 50.000 0.00 0.00 30.88 2.41
1286 1348 1.228769 AGAGCTACGGGGACACACA 60.229 57.895 0.00 0.00 0.00 3.72
1318 1380 1.896220 AAGCAATCCGAAACAGCTCA 58.104 45.000 0.00 0.00 33.83 4.26
1320 1382 2.744202 CACTAAGCAATCCGAAACAGCT 59.256 45.455 0.00 0.00 37.08 4.24
1329 1398 5.874810 TGTTCACAGTATCACTAAGCAATCC 59.125 40.000 0.00 0.00 0.00 3.01
1331 1400 7.334090 AGATGTTCACAGTATCACTAAGCAAT 58.666 34.615 0.00 0.00 0.00 3.56
1360 1429 1.098050 CCCAATGCAGCTGACCTTAC 58.902 55.000 20.43 0.00 0.00 2.34
1479 1576 9.979578 ATCTCTATTCAGTTCTGATAATGTCAC 57.020 33.333 3.28 0.00 32.22 3.67
1531 1628 5.424121 AACAAACAAGAGCTACATCACAC 57.576 39.130 0.00 0.00 0.00 3.82
1784 1887 1.198759 TGCCAGTTCCAGTAGGGTCC 61.199 60.000 0.00 0.00 38.11 4.46
1790 1893 0.396435 CACCACTGCCAGTTCCAGTA 59.604 55.000 0.00 0.00 41.34 2.74
1943 2084 9.167311 AGTAGACAGCCTAAATTCAAGTAAATG 57.833 33.333 0.00 0.00 0.00 2.32
1964 2105 9.462606 TTCAGACATATCTTTGACAGTAGTAGA 57.537 33.333 0.00 0.00 30.42 2.59
2154 2295 9.638239 GCAGACATATGTCCTCAAAAATTAAAA 57.362 29.630 28.26 0.00 45.85 1.52
2174 2315 7.633193 TTAAGAAGTTAAAAACAGGCAGACA 57.367 32.000 0.00 0.00 0.00 3.41
2214 2355 6.021596 CCGCAATGTGATGTAGAACTAAAAC 58.978 40.000 0.00 0.00 0.00 2.43
2232 2374 2.425143 AGTCAACATCATCCCGCAAT 57.575 45.000 0.00 0.00 0.00 3.56
2345 2489 3.701040 ACCTGCAATTGACAGAACAAAGT 59.299 39.130 23.16 12.93 37.32 2.66
2465 2609 5.767816 ATTTACCACAGGTCTGAAACAAC 57.232 39.130 4.84 0.00 37.09 3.32
2466 2610 5.451242 GCAATTTACCACAGGTCTGAAACAA 60.451 40.000 4.84 0.00 37.09 2.83
2467 2611 4.037446 GCAATTTACCACAGGTCTGAAACA 59.963 41.667 4.84 0.00 37.09 2.83
2468 2612 4.037446 TGCAATTTACCACAGGTCTGAAAC 59.963 41.667 4.84 0.00 37.09 2.78
2474 2618 5.897377 AACTATGCAATTTACCACAGGTC 57.103 39.130 0.00 0.00 37.09 3.85
2518 2760 1.070601 GGCACAAAATCAAACAGCCCT 59.929 47.619 0.00 0.00 34.71 5.19
2533 2775 0.106268 TTTTGGCTCTCAAGGGCACA 60.106 50.000 3.95 0.00 38.93 4.57
2558 2800 1.815408 GCCACAGTTTGAGAAGGCTGA 60.815 52.381 0.00 0.00 39.02 4.26
2561 2803 0.595095 CAGCCACAGTTTGAGAAGGC 59.405 55.000 0.00 0.00 42.31 4.35
2639 2881 4.082845 TCCAAAAATGAACTGCGGGATAA 58.917 39.130 0.00 0.00 0.00 1.75
2646 2888 2.818130 TGGCTCCAAAAATGAACTGC 57.182 45.000 0.00 0.00 0.00 4.40
2671 2916 1.228552 GGCAGCTCAGGTTTGGGAA 60.229 57.895 0.00 0.00 0.00 3.97
2672 2917 2.005606 TTGGCAGCTCAGGTTTGGGA 62.006 55.000 0.00 0.00 0.00 4.37
2730 2975 2.948979 TCTGTTTAGTGTGTGCCCAAAG 59.051 45.455 0.00 0.00 0.00 2.77
2744 2989 7.057894 TGCTAGAAAAGGAAAAGGTCTGTTTA 58.942 34.615 0.00 0.00 0.00 2.01
2751 2996 8.360390 CAAGTTAATGCTAGAAAAGGAAAAGGT 58.640 33.333 0.00 0.00 0.00 3.50
2836 3082 9.511272 TCAAAAGGATCATCCAAGATATATGTG 57.489 33.333 6.42 0.00 39.61 3.21
2917 3163 1.132643 ACTCGACTTACCTCATCACGC 59.867 52.381 0.00 0.00 0.00 5.34
2969 3223 3.443681 TGAGACAGATGCATTCGTACTCA 59.556 43.478 17.53 17.53 0.00 3.41
2983 3237 4.323028 GGTGAAGGATGTGAATGAGACAGA 60.323 45.833 0.00 0.00 0.00 3.41
2992 3246 4.860802 ATATGGTGGTGAAGGATGTGAA 57.139 40.909 0.00 0.00 0.00 3.18
2994 3248 7.403312 TTTTTATATGGTGGTGAAGGATGTG 57.597 36.000 0.00 0.00 0.00 3.21
3015 3300 5.221342 TGGCATTGAGAACATAACCGTTTTT 60.221 36.000 0.00 0.00 0.00 1.94
3016 3301 4.279671 TGGCATTGAGAACATAACCGTTTT 59.720 37.500 0.00 0.00 0.00 2.43
3017 3302 3.823873 TGGCATTGAGAACATAACCGTTT 59.176 39.130 0.00 0.00 0.00 3.60
3018 3303 3.417101 TGGCATTGAGAACATAACCGTT 58.583 40.909 0.00 0.00 0.00 4.44
3019 3304 3.066291 TGGCATTGAGAACATAACCGT 57.934 42.857 0.00 0.00 0.00 4.83
3020 3305 5.947228 ATATGGCATTGAGAACATAACCG 57.053 39.130 4.78 0.00 30.51 4.44
3021 3306 7.981225 ACAAAATATGGCATTGAGAACATAACC 59.019 33.333 4.78 0.00 30.51 2.85
3022 3307 8.931385 ACAAAATATGGCATTGAGAACATAAC 57.069 30.769 4.78 0.00 30.51 1.89
3023 3308 8.970020 AGACAAAATATGGCATTGAGAACATAA 58.030 29.630 4.78 0.00 40.75 1.90
3024 3309 8.523915 AGACAAAATATGGCATTGAGAACATA 57.476 30.769 4.78 0.00 40.75 2.29
3025 3310 7.414222 AGACAAAATATGGCATTGAGAACAT 57.586 32.000 4.78 0.00 40.75 2.71
3026 3311 6.839124 AGACAAAATATGGCATTGAGAACA 57.161 33.333 4.78 0.00 40.75 3.18
3027 3312 6.753744 GGAAGACAAAATATGGCATTGAGAAC 59.246 38.462 4.78 0.00 40.75 3.01
3028 3313 6.127366 GGGAAGACAAAATATGGCATTGAGAA 60.127 38.462 4.78 0.00 40.75 2.87
3029 3314 5.360714 GGGAAGACAAAATATGGCATTGAGA 59.639 40.000 4.78 0.00 40.75 3.27
3030 3315 5.594926 GGGAAGACAAAATATGGCATTGAG 58.405 41.667 4.78 0.00 40.75 3.02
3031 3316 4.097741 CGGGAAGACAAAATATGGCATTGA 59.902 41.667 4.78 0.00 40.75 2.57
3032 3317 4.362279 CGGGAAGACAAAATATGGCATTG 58.638 43.478 4.78 0.33 40.75 2.82
3033 3318 3.384467 CCGGGAAGACAAAATATGGCATT 59.616 43.478 4.78 0.00 40.75 3.56
3034 3319 2.958355 CCGGGAAGACAAAATATGGCAT 59.042 45.455 4.88 4.88 40.75 4.40
3035 3320 2.291282 ACCGGGAAGACAAAATATGGCA 60.291 45.455 6.32 0.00 40.75 4.92
3036 3321 2.375146 ACCGGGAAGACAAAATATGGC 58.625 47.619 6.32 0.00 37.30 4.40
3037 3322 4.461081 TCAAACCGGGAAGACAAAATATGG 59.539 41.667 6.32 0.00 0.00 2.74
3038 3323 5.637006 TCAAACCGGGAAGACAAAATATG 57.363 39.130 6.32 0.00 0.00 1.78
3039 3324 6.658188 TTTCAAACCGGGAAGACAAAATAT 57.342 33.333 6.32 0.00 0.00 1.28
3040 3325 6.466885 TTTTCAAACCGGGAAGACAAAATA 57.533 33.333 6.32 0.00 0.00 1.40
3047 3332 3.954904 TGTGAATTTTCAAACCGGGAAGA 59.045 39.130 6.32 0.00 39.21 2.87
3052 3337 3.726291 ACCTGTGAATTTTCAAACCGG 57.274 42.857 0.00 0.00 39.21 5.28
3053 3338 3.245048 GCAACCTGTGAATTTTCAAACCG 59.755 43.478 0.00 0.00 39.21 4.44
3057 3342 4.998671 TCTGCAACCTGTGAATTTTCAA 57.001 36.364 0.00 0.00 39.21 2.69
3060 3345 4.500375 GCTCTTCTGCAACCTGTGAATTTT 60.500 41.667 0.00 0.00 0.00 1.82
3190 3475 3.111484 TGATATGGCACCAGGACTTACA 58.889 45.455 0.00 0.00 0.00 2.41
3214 3499 5.727434 AGTATTAACGAGTAAGGTGTTGGG 58.273 41.667 0.00 0.00 0.00 4.12
3233 3518 7.676683 AACATGACATGGTAACTAGGAGTAT 57.323 36.000 19.39 0.00 37.61 2.12
3253 3538 6.716628 ACAGGTGTTTCATCACTCATAAACAT 59.283 34.615 0.00 0.00 42.07 2.71
3263 3548 6.312399 TGAATACAACAGGTGTTTCATCAC 57.688 37.500 0.00 0.00 41.98 3.06
3353 3638 6.014647 ACTAATACTAACCTGTGTCACTGGA 58.985 40.000 29.66 11.75 39.29 3.86
3447 3732 9.206870 ACAAATGTAATTAATGTCAAGCTTTGG 57.793 29.630 0.00 0.00 33.67 3.28
3450 3735 8.090214 AGCACAAATGTAATTAATGTCAAGCTT 58.910 29.630 0.00 0.00 33.67 3.74
3464 3749 4.824537 TGTAAAGAGGCAGCACAAATGTAA 59.175 37.500 0.00 0.00 0.00 2.41
3537 3827 7.494625 CAGAAAGTAACAAGTTCAGTTAGGACA 59.505 37.037 0.00 0.00 32.56 4.02
3582 3874 9.211485 CAAAATGATCAAAGTAGCCAGAATTTT 57.789 29.630 0.00 0.00 0.00 1.82
3583 3875 7.332678 GCAAAATGATCAAAGTAGCCAGAATTT 59.667 33.333 0.00 0.00 0.00 1.82
3584 3876 6.815142 GCAAAATGATCAAAGTAGCCAGAATT 59.185 34.615 0.00 0.00 0.00 2.17
3585 3877 6.071221 TGCAAAATGATCAAAGTAGCCAGAAT 60.071 34.615 0.00 0.00 0.00 2.40
3587 3879 4.766373 TGCAAAATGATCAAAGTAGCCAGA 59.234 37.500 0.00 0.00 0.00 3.86
3588 3880 5.063180 TGCAAAATGATCAAAGTAGCCAG 57.937 39.130 0.00 0.00 0.00 4.85
3589 3881 4.082081 CCTGCAAAATGATCAAAGTAGCCA 60.082 41.667 0.00 0.00 0.00 4.75
3591 3883 5.314923 TCCTGCAAAATGATCAAAGTAGC 57.685 39.130 0.00 1.44 0.00 3.58
3592 3884 7.092137 TCATCCTGCAAAATGATCAAAGTAG 57.908 36.000 0.00 0.00 0.00 2.57
3593 3885 7.394077 TCTTCATCCTGCAAAATGATCAAAGTA 59.606 33.333 0.00 0.00 32.24 2.24
3595 3887 6.627243 TCTTCATCCTGCAAAATGATCAAAG 58.373 36.000 0.00 6.37 32.24 2.77
3597 3889 6.785337 ATCTTCATCCTGCAAAATGATCAA 57.215 33.333 0.00 2.30 32.24 2.57
3598 3890 6.785337 AATCTTCATCCTGCAAAATGATCA 57.215 33.333 10.54 0.00 32.24 2.92
3662 3966 3.139077 AGTTGAGGTTAAGAAAGGCACG 58.861 45.455 0.00 0.00 0.00 5.34
3676 3980 3.624861 GGAGATGCATGTGTTAGTTGAGG 59.375 47.826 2.46 0.00 0.00 3.86
3700 4004 7.561021 TGTGAAGTTAACAAGAGCATAAACA 57.439 32.000 8.61 0.00 0.00 2.83
3710 4014 6.208644 CAACCAAGGATGTGAAGTTAACAAG 58.791 40.000 8.61 0.00 0.00 3.16
3712 4016 4.037446 GCAACCAAGGATGTGAAGTTAACA 59.963 41.667 8.61 0.00 0.00 2.41
3713 4017 4.037446 TGCAACCAAGGATGTGAAGTTAAC 59.963 41.667 0.00 0.00 0.00 2.01
3726 4030 1.321474 TTTCAGCTCTGCAACCAAGG 58.679 50.000 0.00 0.00 0.00 3.61
3789 4094 8.945193 AGTTTAGAGGGAATAAGCATACCAATA 58.055 33.333 0.00 0.00 0.00 1.90
3817 4122 6.985059 CCTCACTGCATATCATCATGGTATAG 59.015 42.308 0.00 0.00 0.00 1.31
3823 4128 4.254492 CTCCCTCACTGCATATCATCATG 58.746 47.826 0.00 0.00 0.00 3.07
3825 4130 2.038164 GCTCCCTCACTGCATATCATCA 59.962 50.000 0.00 0.00 0.00 3.07
3826 4131 2.038164 TGCTCCCTCACTGCATATCATC 59.962 50.000 0.00 0.00 0.00 2.92
3827 4132 2.052468 TGCTCCCTCACTGCATATCAT 58.948 47.619 0.00 0.00 0.00 2.45
3836 4141 2.507058 TCTATGCAATTGCTCCCTCACT 59.493 45.455 29.37 7.95 42.66 3.41
3838 4143 3.650281 TTCTATGCAATTGCTCCCTCA 57.350 42.857 29.37 10.10 42.66 3.86
3843 4148 6.444633 ACATGCTATTTCTATGCAATTGCTC 58.555 36.000 29.37 4.02 42.66 4.26
3902 4208 1.482182 ACCTATGCAACTGCTCGATGA 59.518 47.619 2.95 0.00 42.66 2.92
3903 4209 1.945387 ACCTATGCAACTGCTCGATG 58.055 50.000 2.95 0.00 42.66 3.84
3909 4215 0.108662 GGCCAAACCTATGCAACTGC 60.109 55.000 0.00 0.00 37.18 4.40
3983 4293 7.596494 ACTACATTATGCAATTGTATCCATGC 58.404 34.615 19.91 2.55 39.22 4.06
4022 4332 5.726980 AATCCACAACACATGCATTTACT 57.273 34.783 0.00 0.00 0.00 2.24
4030 4340 2.488937 TGCTGCTAATCCACAACACATG 59.511 45.455 0.00 0.00 0.00 3.21
4040 4350 1.138661 ACTCTCTGCTGCTGCTAATCC 59.861 52.381 17.00 0.00 40.48 3.01
4056 4366 2.704190 TCTCCCTCTGTTTGGACTCT 57.296 50.000 0.00 0.00 0.00 3.24
4117 4427 4.986054 ATACCAGTCCCAAACTACACAA 57.014 40.909 0.00 0.00 36.07 3.33
4118 4428 4.986054 AATACCAGTCCCAAACTACACA 57.014 40.909 0.00 0.00 36.07 3.72
4127 4437 3.885976 TTTGTCCAAATACCAGTCCCA 57.114 42.857 0.00 0.00 0.00 4.37
4129 4439 5.946377 AGAGATTTTGTCCAAATACCAGTCC 59.054 40.000 0.00 0.00 35.02 3.85
4130 4440 7.040409 ACAAGAGATTTTGTCCAAATACCAGTC 60.040 37.037 0.00 0.00 36.60 3.51
4137 4452 6.923199 ATCCACAAGAGATTTTGTCCAAAT 57.077 33.333 0.00 0.00 39.17 2.32
4138 4453 6.729690 AATCCACAAGAGATTTTGTCCAAA 57.270 33.333 0.00 0.00 39.17 3.28
4139 4454 6.071952 GCTAATCCACAAGAGATTTTGTCCAA 60.072 38.462 0.00 0.00 39.17 3.53
4149 4464 3.198417 TGATGCTGCTAATCCACAAGAGA 59.802 43.478 0.00 0.00 0.00 3.10
4150 4465 3.538591 TGATGCTGCTAATCCACAAGAG 58.461 45.455 0.00 0.00 0.00 2.85
4170 4486 1.964608 TTCCTCTGCTGGGATCGCTG 61.965 60.000 11.46 11.58 32.41 5.18
4173 4489 0.103937 GTCTTCCTCTGCTGGGATCG 59.896 60.000 0.00 0.00 32.41 3.69
4177 4493 0.107312 CATGGTCTTCCTCTGCTGGG 60.107 60.000 0.00 0.00 34.23 4.45
4181 4497 1.552337 TGAGTCATGGTCTTCCTCTGC 59.448 52.381 0.00 0.00 34.23 4.26
4195 4511 5.542635 ACAGTAGTGTTCCCTAAATGAGTCA 59.457 40.000 0.00 0.00 30.30 3.41
4196 4512 6.038997 ACAGTAGTGTTCCCTAAATGAGTC 57.961 41.667 0.00 0.00 30.30 3.36
4201 4517 9.275572 TCCTTAATACAGTAGTGTTCCCTAAAT 57.724 33.333 8.85 0.00 38.19 1.40
4204 4520 6.319658 CGTCCTTAATACAGTAGTGTTCCCTA 59.680 42.308 8.85 0.00 38.19 3.53
4228 4544 8.740906 ACATGTTGTCTCCTATAATCCTATACG 58.259 37.037 0.00 0.00 0.00 3.06
4241 4557 3.864789 AGTCCAAACATGTTGTCTCCT 57.135 42.857 12.82 2.22 0.00 3.69
4242 4558 3.882888 TGAAGTCCAAACATGTTGTCTCC 59.117 43.478 12.82 0.00 0.00 3.71
4243 4559 4.335315 TGTGAAGTCCAAACATGTTGTCTC 59.665 41.667 12.82 4.10 0.00 3.36
4244 4560 4.269183 TGTGAAGTCCAAACATGTTGTCT 58.731 39.130 12.82 5.65 0.00 3.41
4245 4561 4.630894 TGTGAAGTCCAAACATGTTGTC 57.369 40.909 12.82 3.40 0.00 3.18
4246 4562 4.644234 TGATGTGAAGTCCAAACATGTTGT 59.356 37.500 12.82 0.00 34.74 3.32
4247 4563 5.185668 TGATGTGAAGTCCAAACATGTTG 57.814 39.130 12.82 6.46 34.74 3.33
4296 4644 4.142730 GCATCTTTATATAGTGCAGGCTGC 60.143 45.833 31.91 31.91 45.29 5.25
4297 4645 5.243981 AGCATCTTTATATAGTGCAGGCTG 58.756 41.667 10.94 10.94 38.23 4.85
4298 4646 5.495926 AGCATCTTTATATAGTGCAGGCT 57.504 39.130 14.87 3.45 38.23 4.58
4299 4647 7.856145 AATAGCATCTTTATATAGTGCAGGC 57.144 36.000 14.87 1.70 38.23 4.85
4300 4648 9.440773 TGAAATAGCATCTTTATATAGTGCAGG 57.559 33.333 14.87 0.00 38.23 4.85
4348 4696 3.385111 GGTTGGAGTCGGAGAACATAGAT 59.615 47.826 0.00 0.00 39.69 1.98
4354 4702 2.143925 CAAAGGTTGGAGTCGGAGAAC 58.856 52.381 0.00 0.00 39.69 3.01
4361 4709 5.422650 AGATAGGTAGACAAAGGTTGGAGTC 59.577 44.000 0.00 0.00 34.12 3.36
4449 4797 2.719046 GCCTGTTCACGAATTTTGTTCG 59.281 45.455 8.46 8.46 46.36 3.95
4478 4826 3.642848 AGTTGTTGGGAATGAAGCAACAT 59.357 39.130 0.00 0.00 38.75 2.71
4487 4835 3.947910 AGCATTCAGTTGTTGGGAATG 57.052 42.857 8.75 8.75 46.61 2.67
4490 4838 1.962807 CCAAGCATTCAGTTGTTGGGA 59.037 47.619 0.00 0.00 35.07 4.37
4508 4856 8.522830 GTTGATGATTTCCTATTTTCTTCACCA 58.477 33.333 0.00 0.00 0.00 4.17
4510 4858 9.346725 GTGTTGATGATTTCCTATTTTCTTCAC 57.653 33.333 0.00 0.00 0.00 3.18
4528 4876 7.765307 AGTAGCCAATATCTTTTGTGTTGATG 58.235 34.615 0.00 0.00 0.00 3.07
4531 4879 7.326789 CACAAGTAGCCAATATCTTTTGTGTTG 59.673 37.037 6.00 0.00 39.30 3.33
4536 4884 5.801947 GTGCACAAGTAGCCAATATCTTTTG 59.198 40.000 13.17 0.00 0.00 2.44
4547 4896 1.604604 TTGAAGGTGCACAAGTAGCC 58.395 50.000 20.43 0.00 0.00 3.93
4595 4944 5.832060 CCTTTTCTGCATCTAAGATTCCCAT 59.168 40.000 0.00 0.00 0.00 4.00
4596 4945 5.195940 CCTTTTCTGCATCTAAGATTCCCA 58.804 41.667 0.00 0.00 0.00 4.37
4597 4946 5.196695 ACCTTTTCTGCATCTAAGATTCCC 58.803 41.667 0.00 0.00 0.00 3.97
4598 4947 6.601217 AGAACCTTTTCTGCATCTAAGATTCC 59.399 38.462 5.69 0.00 40.82 3.01
4599 4948 7.622893 AGAACCTTTTCTGCATCTAAGATTC 57.377 36.000 0.00 0.00 40.82 2.52
4615 4964 7.724061 ACAACAATTGTACCATCTAGAACCTTT 59.276 33.333 12.39 0.00 43.27 3.11
4630 4979 5.542635 ACTGGACCTAGAGACAACAATTGTA 59.457 40.000 12.39 0.00 45.52 2.41
4646 4995 8.491958 CCTTTATACTATACCAAAACTGGACCT 58.508 37.037 0.00 0.00 0.00 3.85
4651 5000 9.826574 TGTAGCCTTTATACTATACCAAAACTG 57.173 33.333 0.00 0.00 0.00 3.16
4662 5011 7.626390 ACACCACAATTGTAGCCTTTATACTA 58.374 34.615 11.53 0.00 0.00 1.82
4707 5061 7.726216 TCGATGATTGATACAGGTAGAACAAT 58.274 34.615 0.00 0.00 0.00 2.71
4714 5068 7.371159 GTTCATCTCGATGATTGATACAGGTA 58.629 38.462 10.15 0.00 46.12 3.08
4723 5077 4.847365 ACAACGTTCATCTCGATGATTG 57.153 40.909 10.15 13.12 46.12 2.67
4732 5086 8.268850 AGCATTTTCTATTACAACGTTCATCT 57.731 30.769 0.00 0.00 0.00 2.90
4733 5087 9.982291 TTAGCATTTTCTATTACAACGTTCATC 57.018 29.630 0.00 0.00 0.00 2.92
4734 5088 9.769093 GTTAGCATTTTCTATTACAACGTTCAT 57.231 29.630 0.00 0.00 0.00 2.57
4735 5089 8.775527 TGTTAGCATTTTCTATTACAACGTTCA 58.224 29.630 0.00 0.00 0.00 3.18
4736 5090 9.262472 CTGTTAGCATTTTCTATTACAACGTTC 57.738 33.333 0.00 0.00 0.00 3.95
4737 5091 8.780249 ACTGTTAGCATTTTCTATTACAACGTT 58.220 29.630 0.00 0.00 0.00 3.99
4738 5092 8.319143 ACTGTTAGCATTTTCTATTACAACGT 57.681 30.769 0.00 0.00 0.00 3.99
4739 5093 9.607285 AAACTGTTAGCATTTTCTATTACAACG 57.393 29.630 0.00 0.00 0.00 4.10
4784 5140 5.255397 TGCCTCCTTTTCCTCAAATTCTA 57.745 39.130 0.00 0.00 0.00 2.10
4791 5147 0.677731 CGCATGCCTCCTTTTCCTCA 60.678 55.000 13.15 0.00 0.00 3.86
4844 5202 8.994170 GGAGCTTTGAGTATAATTACAGGAATC 58.006 37.037 0.00 0.00 0.00 2.52
4864 5222 7.345914 AGTGGACAACTAAGATATAAGGAGCTT 59.654 37.037 0.00 0.00 37.36 3.74
4881 5239 6.843069 ACAAAATGCAAATTAGTGGACAAC 57.157 33.333 0.00 0.00 0.00 3.32
4912 5270 2.539503 CACACGAGTGCACGAACG 59.460 61.111 23.92 23.92 39.21 3.95
4924 5285 2.030717 AGAGTAGTTGACAGAGCACACG 60.031 50.000 0.00 0.00 0.00 4.49
4929 5290 4.513198 AGTGAAGAGTAGTTGACAGAGC 57.487 45.455 0.00 0.00 0.00 4.09
4932 5293 8.818141 TTTCATTAGTGAAGAGTAGTTGACAG 57.182 34.615 0.65 0.00 44.62 3.51
4938 5299 7.952671 TGTGACTTTCATTAGTGAAGAGTAGT 58.047 34.615 12.39 8.49 44.62 2.73
4939 5300 8.704234 GTTGTGACTTTCATTAGTGAAGAGTAG 58.296 37.037 12.39 6.05 44.62 2.57
4949 5310 6.919662 AGCAACAATGTTGTGACTTTCATTAG 59.080 34.615 24.71 0.00 41.31 1.73
4951 5312 5.521010 CAGCAACAATGTTGTGACTTTCATT 59.479 36.000 24.71 0.00 41.31 2.57
4965 5326 4.508492 TGAATTGTCAAAGCAGCAACAATG 59.492 37.500 13.14 0.00 40.46 2.82
4973 5334 3.567164 AGGACACTGAATTGTCAAAGCAG 59.433 43.478 13.51 13.51 46.68 4.24
4994 5355 7.865706 AGGGCATAAGTAAACATTGTAAGAG 57.134 36.000 0.00 0.00 0.00 2.85
5049 5411 9.521841 AAGCAGTGTTCTCTATATAGTGCTATA 57.478 33.333 17.31 1.89 44.66 1.31
5050 5412 8.415950 AAGCAGTGTTCTCTATATAGTGCTAT 57.584 34.615 17.31 8.86 44.66 2.97
5060 5422 5.814705 GCATTGAGTAAGCAGTGTTCTCTAT 59.185 40.000 0.00 0.00 0.00 1.98
5072 5434 3.065786 TGCAAGCATAGCATTGAGTAAGC 59.934 43.478 0.00 0.00 37.02 3.09
5101 5463 2.289820 CCGATCATCAATCAGGCAGTTG 59.710 50.000 0.00 0.00 33.65 3.16
5104 5466 2.414806 CTCCGATCATCAATCAGGCAG 58.585 52.381 0.00 0.00 33.65 4.85
5210 5572 2.188062 AAAAATAACCCGCGGTCAGA 57.812 45.000 26.12 6.56 33.12 3.27
5230 5592 9.986833 CACGACAATAAAACAATATCATGAAGA 57.013 29.630 0.00 0.00 0.00 2.87
5261 5623 8.270744 AGCTTTGTTTACTCATAGAGAATCCAT 58.729 33.333 0.31 0.00 33.66 3.41
5275 5640 7.119846 CAGCTAACCATTAGAGCTTTGTTTACT 59.880 37.037 0.00 0.00 44.08 2.24
5303 5668 6.633668 GCTGATGCGTTATAGTAACCATAG 57.366 41.667 0.00 0.00 0.00 2.23
5319 5684 3.244814 CAGTTCTCATCTAACGCTGATGC 59.755 47.826 7.68 0.00 40.59 3.91
5322 5687 4.991153 ATCAGTTCTCATCTAACGCTGA 57.009 40.909 0.00 0.00 36.21 4.26
5327 5692 7.915923 TGTCGACATAATCAGTTCTCATCTAAC 59.084 37.037 15.76 0.00 0.00 2.34
5340 5705 3.243737 CCCTCCGAATGTCGACATAATCA 60.244 47.826 30.16 14.31 43.74 2.57
5349 5714 1.665679 CACATTTCCCTCCGAATGTCG 59.334 52.381 0.00 0.00 42.77 4.35
5350 5715 1.401905 GCACATTTCCCTCCGAATGTC 59.598 52.381 0.00 0.00 42.77 3.06
5355 5726 1.750193 GAATGCACATTTCCCTCCGA 58.250 50.000 0.00 0.00 0.00 4.55
5358 5729 2.487762 TGAACGAATGCACATTTCCCTC 59.512 45.455 0.00 0.00 0.00 4.30
5383 5754 7.479916 CGCAGTAGAATTCAATTTCAGAAGTTC 59.520 37.037 8.44 0.00 0.00 3.01
5400 5771 7.709613 GGAATAAGAATTAGGTTCGCAGTAGAA 59.290 37.037 0.00 0.00 41.84 2.10
5437 5816 8.849168 CCTTGATATGTTCCAATTGCTTATGTA 58.151 33.333 0.00 0.00 0.00 2.29
5445 5824 8.685427 TGTTACATCCTTGATATGTTCCAATTG 58.315 33.333 0.00 0.00 38.49 2.32
5446 5825 8.821686 TGTTACATCCTTGATATGTTCCAATT 57.178 30.769 0.00 0.00 38.49 2.32
5447 5826 8.055181 ACTGTTACATCCTTGATATGTTCCAAT 58.945 33.333 0.00 0.00 38.49 3.16
5448 5827 7.402054 ACTGTTACATCCTTGATATGTTCCAA 58.598 34.615 0.00 0.00 38.49 3.53
5449 5828 6.957631 ACTGTTACATCCTTGATATGTTCCA 58.042 36.000 0.00 0.00 38.49 3.53
5450 5829 7.012421 GGAACTGTTACATCCTTGATATGTTCC 59.988 40.741 9.07 9.07 40.73 3.62
5451 5830 7.770897 AGGAACTGTTACATCCTTGATATGTTC 59.229 37.037 5.41 1.01 40.70 3.18
5452 5831 7.633789 AGGAACTGTTACATCCTTGATATGTT 58.366 34.615 5.41 0.00 40.70 2.71
5531 5910 5.862924 TGCTCCAGAAATTTCTTCTAACG 57.137 39.130 18.16 6.02 34.74 3.18
5536 5915 4.157289 TCAGCATGCTCCAGAAATTTCTTC 59.843 41.667 19.68 8.41 32.72 2.87
5539 5918 4.421948 CTTCAGCATGCTCCAGAAATTTC 58.578 43.478 19.68 10.33 34.76 2.17
5543 5922 1.074405 ACCTTCAGCATGCTCCAGAAA 59.926 47.619 19.68 6.53 34.76 2.52
5617 5999 8.409371 TGTCTAACAATGTTTTGCAATACTTGA 58.591 29.630 24.30 11.19 36.22 3.02
5679 6061 1.872773 AACTTGGGGTCTGGCAAAAA 58.127 45.000 0.00 0.00 0.00 1.94
5680 6062 2.593026 CTAACTTGGGGTCTGGCAAAA 58.407 47.619 0.00 0.00 0.00 2.44
5681 6063 1.203001 CCTAACTTGGGGTCTGGCAAA 60.203 52.381 0.00 0.00 0.00 3.68
5682 6064 0.404040 CCTAACTTGGGGTCTGGCAA 59.596 55.000 0.00 0.00 0.00 4.52
5683 6065 2.074967 CCTAACTTGGGGTCTGGCA 58.925 57.895 0.00 0.00 0.00 4.92
5684 6066 1.378646 GCCTAACTTGGGGTCTGGC 60.379 63.158 0.00 0.00 38.37 4.85
5685 6067 0.404040 TTGCCTAACTTGGGGTCTGG 59.596 55.000 0.00 0.00 0.00 3.86
5686 6068 1.826385 CTTGCCTAACTTGGGGTCTG 58.174 55.000 0.00 0.00 0.00 3.51
5687 6069 0.038310 GCTTGCCTAACTTGGGGTCT 59.962 55.000 0.00 0.00 0.00 3.85
5688 6070 0.038310 AGCTTGCCTAACTTGGGGTC 59.962 55.000 0.00 0.00 0.00 4.46
5689 6071 0.251341 CAGCTTGCCTAACTTGGGGT 60.251 55.000 0.00 0.00 0.00 4.95
5690 6072 0.251341 ACAGCTTGCCTAACTTGGGG 60.251 55.000 0.00 0.00 0.00 4.96
5691 6073 1.168714 GACAGCTTGCCTAACTTGGG 58.831 55.000 0.00 0.00 0.00 4.12
5692 6074 1.896220 TGACAGCTTGCCTAACTTGG 58.104 50.000 0.00 0.00 0.00 3.61
5693 6075 2.816087 ACATGACAGCTTGCCTAACTTG 59.184 45.455 0.00 0.00 0.00 3.16
5694 6076 2.816087 CACATGACAGCTTGCCTAACTT 59.184 45.455 0.00 0.00 0.00 2.66
5695 6077 2.224621 ACACATGACAGCTTGCCTAACT 60.225 45.455 0.00 0.00 0.00 2.24
5696 6078 2.154462 ACACATGACAGCTTGCCTAAC 58.846 47.619 0.00 0.00 0.00 2.34
5697 6079 2.224499 TGACACATGACAGCTTGCCTAA 60.224 45.455 0.00 0.00 0.00 2.69
5698 6080 1.347378 TGACACATGACAGCTTGCCTA 59.653 47.619 0.00 0.00 0.00 3.93
5699 6081 0.109153 TGACACATGACAGCTTGCCT 59.891 50.000 0.00 0.00 0.00 4.75
5700 6082 0.520404 CTGACACATGACAGCTTGCC 59.480 55.000 0.00 0.00 31.88 4.52
5701 6083 1.196354 GACTGACACATGACAGCTTGC 59.804 52.381 10.63 0.00 40.55 4.01
5702 6084 2.486918 TGACTGACACATGACAGCTTG 58.513 47.619 10.63 0.00 40.55 4.01
5703 6085 2.916702 TGACTGACACATGACAGCTT 57.083 45.000 10.63 0.00 40.55 3.74
5714 6096 7.607607 AGCTATAAATCAAACATGTGACTGACA 59.392 33.333 0.00 0.00 39.53 3.58
5715 6097 7.907045 CAGCTATAAATCAAACATGTGACTGAC 59.093 37.037 0.00 0.00 0.00 3.51
5716 6098 7.414429 GCAGCTATAAATCAAACATGTGACTGA 60.414 37.037 0.00 3.42 0.00 3.41
5717 6099 6.690098 GCAGCTATAAATCAAACATGTGACTG 59.310 38.462 0.00 0.00 0.00 3.51
5718 6100 6.375174 TGCAGCTATAAATCAAACATGTGACT 59.625 34.615 0.00 0.00 0.00 3.41
5719 6101 6.470235 GTGCAGCTATAAATCAAACATGTGAC 59.530 38.462 0.00 0.00 0.00 3.67
5720 6102 6.404623 GGTGCAGCTATAAATCAAACATGTGA 60.405 38.462 9.07 0.00 0.00 3.58
5721 6103 5.745294 GGTGCAGCTATAAATCAAACATGTG 59.255 40.000 9.07 0.00 0.00 3.21
5722 6104 5.653769 AGGTGCAGCTATAAATCAAACATGT 59.346 36.000 18.63 0.00 0.00 3.21
5723 6105 5.975344 CAGGTGCAGCTATAAATCAAACATG 59.025 40.000 19.71 0.00 0.00 3.21
5724 6106 5.653769 ACAGGTGCAGCTATAAATCAAACAT 59.346 36.000 19.71 0.00 0.00 2.71
5725 6107 5.009631 ACAGGTGCAGCTATAAATCAAACA 58.990 37.500 19.71 0.00 0.00 2.83
5726 6108 5.567138 ACAGGTGCAGCTATAAATCAAAC 57.433 39.130 19.71 0.00 0.00 2.93
5727 6109 5.953183 CAACAGGTGCAGCTATAAATCAAA 58.047 37.500 19.71 0.00 0.00 2.69
5728 6110 5.565592 CAACAGGTGCAGCTATAAATCAA 57.434 39.130 19.71 0.00 0.00 2.57
5742 6124 4.012895 GCGACACGGCAACAGGTG 62.013 66.667 0.00 0.00 39.98 4.00
5745 6127 3.767230 CTCGCGACACGGCAACAG 61.767 66.667 3.71 0.00 43.89 3.16
5746 6128 3.567478 ATCTCGCGACACGGCAACA 62.567 57.895 3.71 0.00 43.89 3.33
5747 6129 2.279937 GAATCTCGCGACACGGCAAC 62.280 60.000 3.71 0.00 43.89 4.17
5748 6130 2.048597 AATCTCGCGACACGGCAA 60.049 55.556 3.71 0.00 43.89 4.52
5749 6131 2.486636 AAGAATCTCGCGACACGGCA 62.487 55.000 3.71 0.00 43.89 5.69
5750 6132 1.352156 AAAGAATCTCGCGACACGGC 61.352 55.000 3.71 0.00 43.89 5.68
5751 6133 1.068474 AAAAGAATCTCGCGACACGG 58.932 50.000 3.71 0.00 43.89 4.94
5752 6134 2.408704 AGAAAAAGAATCTCGCGACACG 59.591 45.455 3.71 0.00 45.62 4.49
5753 6135 3.726436 CAGAAAAAGAATCTCGCGACAC 58.274 45.455 3.71 0.00 0.00 3.67
5754 6136 2.157668 GCAGAAAAAGAATCTCGCGACA 59.842 45.455 3.71 0.00 0.00 4.35
5755 6137 2.474691 GGCAGAAAAAGAATCTCGCGAC 60.475 50.000 3.71 0.00 0.00 5.19
5756 6138 1.732259 GGCAGAAAAAGAATCTCGCGA 59.268 47.619 9.26 9.26 0.00 5.87
5757 6139 1.464608 TGGCAGAAAAAGAATCTCGCG 59.535 47.619 0.00 0.00 0.00 5.87
5758 6140 2.414691 GGTGGCAGAAAAAGAATCTCGC 60.415 50.000 0.00 0.00 0.00 5.03
5759 6141 3.077359 AGGTGGCAGAAAAAGAATCTCG 58.923 45.455 0.00 0.00 0.00 4.04
5760 6142 3.192212 CCAGGTGGCAGAAAAAGAATCTC 59.808 47.826 0.00 0.00 0.00 2.75
5761 6143 3.160269 CCAGGTGGCAGAAAAAGAATCT 58.840 45.455 0.00 0.00 0.00 2.40
5762 6144 2.232208 CCCAGGTGGCAGAAAAAGAATC 59.768 50.000 0.00 0.00 0.00 2.52
5763 6145 2.250924 CCCAGGTGGCAGAAAAAGAAT 58.749 47.619 0.00 0.00 0.00 2.40
5764 6146 1.063266 ACCCAGGTGGCAGAAAAAGAA 60.063 47.619 0.00 0.00 37.83 2.52
5765 6147 0.555769 ACCCAGGTGGCAGAAAAAGA 59.444 50.000 0.00 0.00 37.83 2.52
5766 6148 0.961753 GACCCAGGTGGCAGAAAAAG 59.038 55.000 0.00 0.00 37.83 2.27
5836 6218 7.807433 GCACAATATCAGAATTGTAAACACACA 59.193 33.333 2.17 0.00 45.92 3.72
5843 6225 6.889177 TGAAGGGCACAATATCAGAATTGTAA 59.111 34.615 2.17 0.00 45.92 2.41
5859 6241 8.470002 ACAAGAAATAATAAAGATGAAGGGCAC 58.530 33.333 0.00 0.00 0.00 5.01
5908 6293 9.638239 ATTACAAAGTCGCACATTATTCATTTT 57.362 25.926 0.00 0.00 0.00 1.82
5928 6313 7.545265 GCAACCATCTGCAATAAGAAATTACAA 59.455 33.333 0.00 0.00 42.17 2.41
5932 6317 6.290294 AGCAACCATCTGCAATAAGAAATT 57.710 33.333 0.00 0.00 45.18 1.82
6014 6399 4.405680 AGAACATAATTTGGGGCTTTAGGC 59.594 41.667 0.00 0.00 40.90 3.93
6097 6483 7.130269 ACGCTGTAAAAACAATTGTCTAAGAC 58.870 34.615 12.39 7.48 0.00 3.01
6111 6497 3.066064 AGCATGTGACAACGCTGTAAAAA 59.934 39.130 11.45 0.00 35.30 1.94
6126 6519 5.008619 AGAGTAGATTGTCAGAGCATGTG 57.991 43.478 0.00 0.00 0.00 3.21
6240 6633 3.449227 CCACGAGGCGGTAGCTGA 61.449 66.667 0.00 0.00 44.37 4.26
6301 6694 1.160137 CTTTGCCGGACTCCTTTCTG 58.840 55.000 5.05 0.00 0.00 3.02
6331 6724 1.867919 CGAACTCCTCGGCTCACAGT 61.868 60.000 0.00 0.00 44.20 3.55
6347 6740 3.379445 GGTCGTCTGGCCTCCGAA 61.379 66.667 3.32 0.00 31.68 4.30
6542 6935 1.153449 TTCCCACGGTCATCATCGC 60.153 57.895 0.00 0.00 0.00 4.58
6600 6993 2.104572 TATCAGCATCAGGGCTCCGC 62.105 60.000 0.00 0.00 43.68 5.54
6671 7064 0.760567 TCTATCATCCTGGTGCCGCT 60.761 55.000 0.00 0.00 0.00 5.52
6680 7073 5.338219 GCAGCCAACATCTATCTATCATCCT 60.338 44.000 0.00 0.00 0.00 3.24
6756 7149 7.094549 ACGCCTAAACATTTCAAGCTACATAAA 60.095 33.333 0.00 0.00 0.00 1.40
6757 7150 6.373216 ACGCCTAAACATTTCAAGCTACATAA 59.627 34.615 0.00 0.00 0.00 1.90
6758 7151 5.878116 ACGCCTAAACATTTCAAGCTACATA 59.122 36.000 0.00 0.00 0.00 2.29
6771 7165 9.856488 CATATTATACAGTCTACGCCTAAACAT 57.144 33.333 0.00 0.00 0.00 2.71
6772 7166 8.301720 CCATATTATACAGTCTACGCCTAAACA 58.698 37.037 0.00 0.00 0.00 2.83
6773 7167 7.758528 CCCATATTATACAGTCTACGCCTAAAC 59.241 40.741 0.00 0.00 0.00 2.01
6774 7168 7.670979 TCCCATATTATACAGTCTACGCCTAAA 59.329 37.037 0.00 0.00 0.00 1.85
6775 7169 7.177184 TCCCATATTATACAGTCTACGCCTAA 58.823 38.462 0.00 0.00 0.00 2.69
6776 7170 6.724351 TCCCATATTATACAGTCTACGCCTA 58.276 40.000 0.00 0.00 0.00 3.93
6791 7185 5.367945 AAACTTTCCGAGCTCCCATATTA 57.632 39.130 8.47 0.00 0.00 0.98
6802 7196 5.362556 ACATGTGATGAAAACTTTCCGAG 57.637 39.130 0.00 0.00 36.36 4.63
6803 7197 5.298026 TGAACATGTGATGAAAACTTTCCGA 59.702 36.000 0.00 0.00 36.36 4.55
6841 7235 7.540299 ACGTCCTTTTTGATCTAAAAACAACA 58.460 30.769 14.51 0.00 41.88 3.33
6842 7236 7.980742 ACGTCCTTTTTGATCTAAAAACAAC 57.019 32.000 14.51 11.56 41.88 3.32
6843 7237 8.989653 AAACGTCCTTTTTGATCTAAAAACAA 57.010 26.923 14.51 2.85 41.88 2.83
6844 7238 8.865001 CAAAACGTCCTTTTTGATCTAAAAACA 58.135 29.630 14.51 3.51 45.54 2.83
6876 7275 2.175035 GAACCACCGGTCCGAATCCA 62.175 60.000 14.39 0.00 33.12 3.41
6880 7279 2.738480 CTGAACCACCGGTCCGAA 59.262 61.111 14.39 0.00 33.12 4.30
6884 7283 1.671379 GAAGGCTGAACCACCGGTC 60.671 63.158 2.59 0.00 43.14 4.79
6899 7299 9.039870 CAGGAGAGCAGTTATTAACTATTGAAG 57.960 37.037 8.71 0.00 40.46 3.02
6905 7305 6.852420 ACACAGGAGAGCAGTTATTAACTA 57.148 37.500 8.71 0.00 40.46 2.24
6910 7310 6.791867 TGTATACACAGGAGAGCAGTTATT 57.208 37.500 0.08 0.00 0.00 1.40
6924 7324 3.865164 CAGAATCGCTTGCTGTATACACA 59.135 43.478 0.08 2.90 0.00 3.72
6929 7329 2.208431 GAGCAGAATCGCTTGCTGTAT 58.792 47.619 3.42 0.00 44.01 2.29
6930 7330 1.645034 GAGCAGAATCGCTTGCTGTA 58.355 50.000 3.42 0.00 44.01 2.74
6931 7331 1.357258 CGAGCAGAATCGCTTGCTGT 61.357 55.000 3.42 0.00 44.01 4.40
6932 7332 1.347564 CGAGCAGAATCGCTTGCTG 59.652 57.895 3.42 0.00 44.01 4.41
6933 7333 0.671781 AACGAGCAGAATCGCTTGCT 60.672 50.000 12.07 4.99 45.83 3.91
6934 7334 0.166814 AAACGAGCAGAATCGCTTGC 59.833 50.000 12.07 0.42 45.83 4.01
6936 7336 2.086054 AGAAACGAGCAGAATCGCTT 57.914 45.000 0.00 0.00 46.60 4.68
6938 7338 2.028165 GTGTAGAAACGAGCAGAATCGC 59.972 50.000 0.00 0.00 46.60 4.58
6941 7341 6.619801 AAAAAGTGTAGAAACGAGCAGAAT 57.380 33.333 0.00 0.00 0.00 2.40
6987 7406 4.960938 ACCATTGGAAGAAAAAGGAAAGC 58.039 39.130 10.37 0.00 0.00 3.51
6991 7410 6.806668 AAGAAACCATTGGAAGAAAAAGGA 57.193 33.333 10.37 0.00 0.00 3.36
7005 7424 9.065798 CCCATTTCATTTGTTAAAAGAAACCAT 57.934 29.630 6.79 0.00 31.40 3.55
7012 7431 9.881529 CAACATTCCCATTTCATTTGTTAAAAG 57.118 29.630 0.00 0.00 0.00 2.27
7017 7436 6.590068 TGACAACATTCCCATTTCATTTGTT 58.410 32.000 0.00 0.00 0.00 2.83
7022 7442 7.451732 TGAAATTGACAACATTCCCATTTCAT 58.548 30.769 11.17 0.00 33.42 2.57
7030 7450 7.887996 TTAAGCATGAAATTGACAACATTCC 57.112 32.000 0.00 0.29 0.00 3.01
7038 7458 9.305110 CGAAAACATTTTAAGCATGAAATTGAC 57.695 29.630 0.00 0.00 0.00 3.18
7042 7462 6.934083 ACCCGAAAACATTTTAAGCATGAAAT 59.066 30.769 0.00 0.00 0.00 2.17
7046 7466 7.330700 ACAATACCCGAAAACATTTTAAGCATG 59.669 33.333 0.00 0.00 0.00 4.06
7056 7476 5.538849 AACCAAACAATACCCGAAAACAT 57.461 34.783 0.00 0.00 0.00 2.71
7058 7478 5.110598 ACAAACCAAACAATACCCGAAAAC 58.889 37.500 0.00 0.00 0.00 2.43
7059 7479 5.340439 ACAAACCAAACAATACCCGAAAA 57.660 34.783 0.00 0.00 0.00 2.29
7063 7483 3.366577 GCCTACAAACCAAACAATACCCG 60.367 47.826 0.00 0.00 0.00 5.28
7107 7530 0.101040 TTACCAGACCCGCGATAACG 59.899 55.000 8.23 0.00 42.93 3.18
7113 7536 0.672401 ACACATTTACCAGACCCGCG 60.672 55.000 0.00 0.00 0.00 6.46
7114 7537 2.277084 CTACACATTTACCAGACCCGC 58.723 52.381 0.00 0.00 0.00 6.13
7132 7555 6.542005 TGTTGAGCTGTTTGATGAAGAAACTA 59.458 34.615 0.00 0.00 34.88 2.24
7133 7556 5.357878 TGTTGAGCTGTTTGATGAAGAAACT 59.642 36.000 0.00 0.00 34.88 2.66
7142 7565 1.967319 ACGGTGTTGAGCTGTTTGAT 58.033 45.000 0.00 0.00 0.00 2.57
7148 7571 2.290641 AGCTTTTAACGGTGTTGAGCTG 59.709 45.455 12.83 0.00 37.58 4.24
7152 7575 2.223618 GGCAAGCTTTTAACGGTGTTGA 60.224 45.455 0.00 0.00 0.00 3.18
7153 7576 2.124122 GGCAAGCTTTTAACGGTGTTG 58.876 47.619 0.00 0.00 0.00 3.33
7164 7587 5.289083 TGTGGAAAAATAAGGCAAGCTTT 57.711 34.783 0.00 0.00 0.00 3.51
7165 7588 4.953940 TGTGGAAAAATAAGGCAAGCTT 57.046 36.364 0.00 0.00 0.00 3.74
7166 7589 4.953940 TTGTGGAAAAATAAGGCAAGCT 57.046 36.364 0.00 0.00 0.00 3.74
7167 7590 6.558771 ATTTTGTGGAAAAATAAGGCAAGC 57.441 33.333 0.00 0.00 34.72 4.01
7168 7591 8.152309 TGAATTTTGTGGAAAAATAAGGCAAG 57.848 30.769 0.00 0.00 34.72 4.01
7170 7593 8.688747 AATGAATTTTGTGGAAAAATAAGGCA 57.311 26.923 0.00 0.00 34.72 4.75
7194 7617 6.715718 TGTAATTCCTTGTCCCATTTCGTAAA 59.284 34.615 0.00 0.00 0.00 2.01
7198 7621 5.637006 TTGTAATTCCTTGTCCCATTTCG 57.363 39.130 0.00 0.00 0.00 3.46
7203 7626 7.130681 ACAAATTTTGTAATTCCTTGTCCCA 57.869 32.000 12.98 0.00 43.27 4.37
7226 7649 9.959749 TCAAAAAGGTTATTTGACATACTTGAC 57.040 29.630 0.00 0.00 40.75 3.18
7237 7660 4.528206 AGCTCCCCTCAAAAAGGTTATTTG 59.472 41.667 0.00 0.00 44.56 2.32
7258 7681 4.849926 CGCATAATGATCTAACATGCAAGC 59.150 41.667 16.68 0.00 41.59 4.01
7277 7700 3.543680 ACAGCTAAATCTACCACGCAT 57.456 42.857 0.00 0.00 0.00 4.73
7313 7737 5.551233 ACACTAGCAGAGATTGTTAAAGCA 58.449 37.500 0.00 0.00 0.00 3.91
7320 7744 4.993584 CAGTGAAACACTAGCAGAGATTGT 59.006 41.667 4.08 0.00 43.43 2.71
7321 7745 4.993584 ACAGTGAAACACTAGCAGAGATTG 59.006 41.667 0.00 0.00 43.43 2.67
7326 7750 4.400529 TTGACAGTGAAACACTAGCAGA 57.599 40.909 0.00 0.00 43.43 4.26
7327 7751 4.083643 CCATTGACAGTGAAACACTAGCAG 60.084 45.833 0.00 0.00 43.43 4.24
7328 7752 3.814842 CCATTGACAGTGAAACACTAGCA 59.185 43.478 0.00 3.53 43.43 3.49
7330 7754 6.455647 TCTACCATTGACAGTGAAACACTAG 58.544 40.000 0.00 0.00 43.43 2.57
7332 7756 5.290493 TCTACCATTGACAGTGAAACACT 57.710 39.130 0.00 0.00 46.51 3.55
7333 7757 6.560253 ATTCTACCATTGACAGTGAAACAC 57.440 37.500 0.00 0.00 41.43 3.32
7374 7798 1.448985 TTCTCATTTCCTTTCCGCCG 58.551 50.000 0.00 0.00 0.00 6.46
7441 7867 1.548582 CCAGGTTTTCTCACATGGGCT 60.549 52.381 0.00 0.00 43.60 5.19
7468 7894 2.686835 GGAGAGCTGGGGAGTGCT 60.687 66.667 0.00 0.00 0.00 4.40
7469 7895 3.791586 GGGAGAGCTGGGGAGTGC 61.792 72.222 0.00 0.00 0.00 4.40
7470 7896 3.086600 GGGGAGAGCTGGGGAGTG 61.087 72.222 0.00 0.00 0.00 3.51
7471 7897 3.288381 AGGGGAGAGCTGGGGAGT 61.288 66.667 0.00 0.00 0.00 3.85
7472 7898 2.445654 GAGGGGAGAGCTGGGGAG 60.446 72.222 0.00 0.00 0.00 4.30
7473 7899 2.415962 TTTGAGGGGAGAGCTGGGGA 62.416 60.000 0.00 0.00 0.00 4.81
7474 7900 1.500783 TTTTGAGGGGAGAGCTGGGG 61.501 60.000 0.00 0.00 0.00 4.96
7475 7901 0.405585 TTTTTGAGGGGAGAGCTGGG 59.594 55.000 0.00 0.00 0.00 4.45
7497 7923 0.480252 AGAGCTGGGGAGTGCTTTTT 59.520 50.000 0.00 0.00 0.00 1.94
7498 7924 0.251077 CAGAGCTGGGGAGTGCTTTT 60.251 55.000 0.00 0.00 0.00 2.27
7499 7925 1.377994 CAGAGCTGGGGAGTGCTTT 59.622 57.895 0.00 0.00 0.00 3.51
7500 7926 2.600729 CCAGAGCTGGGGAGTGCTT 61.601 63.158 8.69 0.00 46.81 3.91
7548 7974 1.691195 GCAGGGTAGCTCCTCCTTCC 61.691 65.000 0.00 0.00 34.31 3.46
7569 7995 1.583477 GGCCTATACGTAGCGGGAC 59.417 63.158 13.07 7.90 0.00 4.46
7579 8005 0.037232 GAGATGGTGCCGGCCTATAC 60.037 60.000 26.77 15.64 0.00 1.47
7598 8024 3.314553 CAGCTGCTTGAGTTTGAAATGG 58.685 45.455 0.00 0.00 0.00 3.16
7600 8026 2.606308 CGCAGCTGCTTGAGTTTGAAAT 60.606 45.455 34.22 0.00 39.32 2.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.