Multiple sequence alignment - TraesCS7B01G370800
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS7B01G370800 | chr7B | 100.000 | 4274 | 0 | 0 | 1 | 4274 | 636628607 | 636624334 | 0.000000e+00 | 7893.0 |
1 | TraesCS7B01G370800 | chr7B | 89.362 | 141 | 15 | 0 | 3915 | 4055 | 501199886 | 501199746 | 1.220000e-40 | 178.0 |
2 | TraesCS7B01G370800 | chr7A | 90.109 | 2103 | 72 | 46 | 751 | 2792 | 665379944 | 665377917 | 0.000000e+00 | 2606.0 |
3 | TraesCS7B01G370800 | chr7A | 90.909 | 286 | 21 | 5 | 3010 | 3290 | 84571681 | 84571396 | 3.120000e-101 | 379.0 |
4 | TraesCS7B01G370800 | chr7A | 90.559 | 286 | 22 | 5 | 3010 | 3290 | 387205300 | 387205585 | 1.450000e-99 | 374.0 |
5 | TraesCS7B01G370800 | chr7A | 91.968 | 249 | 14 | 2 | 1 | 249 | 563194514 | 563194756 | 1.140000e-90 | 344.0 |
6 | TraesCS7B01G370800 | chr7A | 83.761 | 351 | 17 | 13 | 436 | 746 | 665450063 | 665450413 | 3.230000e-76 | 296.0 |
7 | TraesCS7B01G370800 | chr7A | 93.023 | 129 | 9 | 0 | 3927 | 4055 | 355242115 | 355242243 | 5.640000e-44 | 189.0 |
8 | TraesCS7B01G370800 | chr7A | 97.143 | 35 | 1 | 0 | 362 | 396 | 665440652 | 665440686 | 4.620000e-05 | 60.2 |
9 | TraesCS7B01G370800 | chr2B | 93.896 | 1540 | 34 | 17 | 1284 | 2792 | 734855346 | 734856856 | 0.000000e+00 | 2268.0 |
10 | TraesCS7B01G370800 | chr2B | 89.806 | 412 | 7 | 5 | 888 | 1284 | 734854548 | 734854939 | 2.970000e-136 | 496.0 |
11 | TraesCS7B01G370800 | chr2B | 94.649 | 299 | 11 | 3 | 3010 | 3307 | 734856853 | 734857147 | 3.890000e-125 | 459.0 |
12 | TraesCS7B01G370800 | chr2B | 85.753 | 365 | 21 | 15 | 1403 | 1750 | 416250142 | 416249792 | 1.460000e-94 | 357.0 |
13 | TraesCS7B01G370800 | chr2B | 85.470 | 351 | 11 | 9 | 436 | 746 | 174389614 | 174389964 | 3.190000e-86 | 329.0 |
14 | TraesCS7B01G370800 | chr2B | 83.483 | 333 | 27 | 11 | 436 | 746 | 39746117 | 39745791 | 6.990000e-73 | 285.0 |
15 | TraesCS7B01G370800 | chr2B | 88.987 | 227 | 17 | 5 | 2573 | 2792 | 26702909 | 26703134 | 1.510000e-69 | 274.0 |
16 | TraesCS7B01G370800 | chr2B | 95.031 | 161 | 8 | 0 | 145 | 305 | 735522889 | 735522729 | 1.970000e-63 | 254.0 |
17 | TraesCS7B01G370800 | chr2B | 95.041 | 121 | 2 | 1 | 768 | 888 | 734804057 | 734804173 | 2.030000e-43 | 187.0 |
18 | TraesCS7B01G370800 | chr2B | 94.805 | 77 | 4 | 0 | 1317 | 1393 | 33677845 | 33677921 | 2.090000e-23 | 121.0 |
19 | TraesCS7B01G370800 | chr7D | 85.561 | 1212 | 69 | 44 | 439 | 1611 | 575363726 | 575362582 | 0.000000e+00 | 1171.0 |
20 | TraesCS7B01G370800 | chr7D | 86.750 | 400 | 27 | 11 | 1366 | 1750 | 180441631 | 180442019 | 5.110000e-114 | 422.0 |
21 | TraesCS7B01G370800 | chr7D | 92.593 | 216 | 16 | 0 | 2791 | 3006 | 466832613 | 466832828 | 1.150000e-80 | 311.0 |
22 | TraesCS7B01G370800 | chr7D | 83.784 | 333 | 25 | 9 | 436 | 746 | 165951976 | 165951651 | 5.410000e-74 | 289.0 |
23 | TraesCS7B01G370800 | chr7D | 95.455 | 66 | 2 | 1 | 186 | 250 | 165952687 | 165952622 | 2.100000e-18 | 104.0 |
24 | TraesCS7B01G370800 | chr5B | 85.950 | 968 | 56 | 41 | 839 | 1749 | 610546993 | 610546049 | 0.000000e+00 | 961.0 |
25 | TraesCS7B01G370800 | chr5B | 83.012 | 518 | 52 | 22 | 1986 | 2475 | 555011079 | 555011588 | 1.820000e-118 | 436.0 |
26 | TraesCS7B01G370800 | chr5B | 89.000 | 300 | 27 | 6 | 3010 | 3304 | 150999913 | 150999615 | 2.430000e-97 | 366.0 |
27 | TraesCS7B01G370800 | chr5B | 84.046 | 351 | 16 | 6 | 436 | 746 | 112253405 | 112253055 | 6.950000e-78 | 302.0 |
28 | TraesCS7B01G370800 | chr5B | 91.925 | 161 | 13 | 0 | 145 | 305 | 236077933 | 236077773 | 4.300000e-55 | 226.0 |
29 | TraesCS7B01G370800 | chr5B | 93.130 | 131 | 9 | 0 | 3924 | 4054 | 698260583 | 698260713 | 4.360000e-45 | 193.0 |
30 | TraesCS7B01G370800 | chr5B | 92.424 | 132 | 9 | 1 | 3922 | 4053 | 648278083 | 648277953 | 2.030000e-43 | 187.0 |
31 | TraesCS7B01G370800 | chr5B | 92.857 | 126 | 9 | 0 | 3923 | 4048 | 659479889 | 659480014 | 2.620000e-42 | 183.0 |
32 | TraesCS7B01G370800 | chr5B | 83.240 | 179 | 21 | 8 | 2304 | 2478 | 595469866 | 595469693 | 5.720000e-34 | 156.0 |
33 | TraesCS7B01G370800 | chr5B | 92.857 | 98 | 6 | 1 | 2146 | 2242 | 595621017 | 595620920 | 1.600000e-29 | 141.0 |
34 | TraesCS7B01G370800 | chr5B | 95.455 | 66 | 2 | 1 | 186 | 250 | 112254112 | 112254047 | 2.100000e-18 | 104.0 |
35 | TraesCS7B01G370800 | chr5B | 86.022 | 93 | 8 | 4 | 2134 | 2226 | 595346622 | 595346535 | 1.270000e-15 | 95.3 |
36 | TraesCS7B01G370800 | chr5A | 85.434 | 968 | 62 | 43 | 839 | 1750 | 617237631 | 617236687 | 0.000000e+00 | 933.0 |
37 | TraesCS7B01G370800 | chr5A | 90.635 | 299 | 21 | 5 | 3010 | 3306 | 617236359 | 617236066 | 1.440000e-104 | 390.0 |
38 | TraesCS7B01G370800 | chr5A | 85.000 | 400 | 32 | 10 | 1368 | 1750 | 667565603 | 667565991 | 8.670000e-102 | 381.0 |
39 | TraesCS7B01G370800 | chr5A | 90.909 | 286 | 20 | 6 | 3010 | 3290 | 682620710 | 682620426 | 3.120000e-101 | 379.0 |
40 | TraesCS7B01G370800 | chr5A | 90.136 | 294 | 24 | 5 | 3010 | 3298 | 631551967 | 631552260 | 1.120000e-100 | 377.0 |
41 | TraesCS7B01G370800 | chr5A | 90.559 | 286 | 22 | 5 | 3010 | 3290 | 503374885 | 503375170 | 1.450000e-99 | 374.0 |
42 | TraesCS7B01G370800 | chr5A | 88.341 | 223 | 12 | 6 | 1528 | 1750 | 241457954 | 241457746 | 5.480000e-64 | 255.0 |
43 | TraesCS7B01G370800 | chr5A | 83.333 | 186 | 19 | 12 | 2304 | 2478 | 606045207 | 606045023 | 1.230000e-35 | 161.0 |
44 | TraesCS7B01G370800 | chr5A | 92.000 | 100 | 5 | 2 | 2146 | 2242 | 606045391 | 606045292 | 2.070000e-28 | 137.0 |
45 | TraesCS7B01G370800 | chr3B | 90.759 | 606 | 31 | 7 | 1745 | 2348 | 739981798 | 739981216 | 0.000000e+00 | 785.0 |
46 | TraesCS7B01G370800 | chr3B | 89.211 | 380 | 36 | 5 | 1758 | 2133 | 739983072 | 739982694 | 1.800000e-128 | 470.0 |
47 | TraesCS7B01G370800 | chr3B | 87.952 | 166 | 15 | 2 | 145 | 305 | 57114627 | 57114792 | 1.570000e-44 | 191.0 |
48 | TraesCS7B01G370800 | chr3B | 89.362 | 141 | 15 | 0 | 3915 | 4055 | 563848531 | 563848391 | 1.220000e-40 | 178.0 |
49 | TraesCS7B01G370800 | chr5D | 87.034 | 725 | 40 | 28 | 830 | 1518 | 494236885 | 494236179 | 0.000000e+00 | 769.0 |
50 | TraesCS7B01G370800 | chr5D | 83.846 | 520 | 49 | 21 | 1986 | 2475 | 454119495 | 454120009 | 3.010000e-126 | 462.0 |
51 | TraesCS7B01G370800 | chr5D | 91.873 | 283 | 20 | 3 | 3010 | 3290 | 494235642 | 494235361 | 4.010000e-105 | 392.0 |
52 | TraesCS7B01G370800 | chr5D | 92.627 | 217 | 16 | 0 | 2790 | 3006 | 383858663 | 383858879 | 3.210000e-81 | 313.0 |
53 | TraesCS7B01G370800 | chr5D | 91.189 | 227 | 12 | 5 | 2573 | 2792 | 393440725 | 393440500 | 6.950000e-78 | 302.0 |
54 | TraesCS7B01G370800 | chr5D | 84.324 | 185 | 18 | 10 | 2304 | 2478 | 484403884 | 484403701 | 2.040000e-38 | 171.0 |
55 | TraesCS7B01G370800 | chr3A | 87.773 | 687 | 35 | 9 | 1759 | 2443 | 693460161 | 693459522 | 0.000000e+00 | 758.0 |
56 | TraesCS7B01G370800 | chr3A | 91.239 | 331 | 24 | 4 | 1806 | 2133 | 693461328 | 693461000 | 3.030000e-121 | 446.0 |
57 | TraesCS7B01G370800 | chr3A | 86.534 | 401 | 26 | 13 | 1366 | 1750 | 703851562 | 703851174 | 2.380000e-112 | 416.0 |
58 | TraesCS7B01G370800 | chr3A | 91.705 | 217 | 18 | 0 | 2790 | 3006 | 645094630 | 645094414 | 6.950000e-78 | 302.0 |
59 | TraesCS7B01G370800 | chr3A | 91.935 | 62 | 3 | 2 | 36 | 96 | 744480586 | 744480526 | 7.610000e-13 | 86.1 |
60 | TraesCS7B01G370800 | chr4D | 94.514 | 401 | 17 | 1 | 1 | 401 | 220053911 | 220053516 | 7.850000e-172 | 614.0 |
61 | TraesCS7B01G370800 | chr4D | 84.527 | 349 | 15 | 6 | 437 | 746 | 220052887 | 220052539 | 4.150000e-80 | 309.0 |
62 | TraesCS7B01G370800 | chr4D | 88.987 | 227 | 17 | 5 | 2573 | 2792 | 63852060 | 63852285 | 1.510000e-69 | 274.0 |
63 | TraesCS7B01G370800 | chr4D | 88.496 | 226 | 17 | 6 | 2573 | 2791 | 220186753 | 220186976 | 9.110000e-67 | 265.0 |
64 | TraesCS7B01G370800 | chr4D | 91.176 | 102 | 3 | 2 | 112 | 212 | 486435542 | 486435446 | 2.680000e-27 | 134.0 |
65 | TraesCS7B01G370800 | chr3D | 86.466 | 399 | 29 | 10 | 1366 | 1750 | 86079399 | 86079012 | 8.550000e-112 | 414.0 |
66 | TraesCS7B01G370800 | chr3D | 89.091 | 330 | 32 | 4 | 1806 | 2133 | 557704819 | 557704492 | 1.430000e-109 | 407.0 |
67 | TraesCS7B01G370800 | chr3D | 85.319 | 361 | 21 | 16 | 1360 | 1704 | 327311688 | 327312032 | 1.140000e-90 | 344.0 |
68 | TraesCS7B01G370800 | chr3D | 92.500 | 240 | 14 | 3 | 1749 | 1986 | 557703625 | 557703388 | 1.470000e-89 | 340.0 |
69 | TraesCS7B01G370800 | chr3D | 89.862 | 217 | 15 | 4 | 2583 | 2792 | 358048718 | 358048934 | 5.450000e-69 | 272.0 |
70 | TraesCS7B01G370800 | chr3D | 93.798 | 129 | 7 | 1 | 2057 | 2185 | 557703388 | 557703261 | 4.360000e-45 | 193.0 |
71 | TraesCS7B01G370800 | chr3D | 85.417 | 192 | 17 | 8 | 2293 | 2478 | 557704381 | 557704195 | 5.640000e-44 | 189.0 |
72 | TraesCS7B01G370800 | chr2A | 84.988 | 433 | 38 | 15 | 3450 | 3869 | 383628646 | 383629064 | 8.550000e-112 | 414.0 |
73 | TraesCS7B01G370800 | chr2A | 88.987 | 227 | 17 | 5 | 2573 | 2792 | 500246501 | 500246726 | 1.510000e-69 | 274.0 |
74 | TraesCS7B01G370800 | chr2A | 85.455 | 220 | 21 | 3 | 4055 | 4268 | 383629921 | 383630135 | 7.200000e-53 | 219.0 |
75 | TraesCS7B01G370800 | chr2A | 84.211 | 76 | 9 | 3 | 205 | 279 | 622752908 | 622752981 | 2.130000e-08 | 71.3 |
76 | TraesCS7B01G370800 | chr2D | 84.862 | 436 | 34 | 16 | 3453 | 3870 | 632287821 | 632288242 | 1.110000e-110 | 411.0 |
77 | TraesCS7B01G370800 | chr2D | 81.644 | 523 | 55 | 30 | 1984 | 2475 | 403328307 | 403327795 | 3.100000e-106 | 396.0 |
78 | TraesCS7B01G370800 | chr2D | 85.455 | 385 | 28 | 13 | 1382 | 1750 | 91715457 | 91715829 | 4.030000e-100 | 375.0 |
79 | TraesCS7B01G370800 | chr2D | 92.308 | 221 | 16 | 1 | 2784 | 3003 | 393072263 | 393072483 | 3.210000e-81 | 313.0 |
80 | TraesCS7B01G370800 | chr2D | 91.818 | 220 | 16 | 2 | 2787 | 3006 | 55272993 | 55273210 | 5.370000e-79 | 305.0 |
81 | TraesCS7B01G370800 | chr2D | 91.705 | 217 | 17 | 1 | 2790 | 3006 | 155616270 | 155616055 | 2.500000e-77 | 300.0 |
82 | TraesCS7B01G370800 | chr2D | 87.805 | 164 | 12 | 2 | 4114 | 4274 | 632289117 | 632289275 | 7.300000e-43 | 185.0 |
83 | TraesCS7B01G370800 | chr2D | 92.248 | 129 | 10 | 0 | 3927 | 4055 | 426844939 | 426844811 | 2.620000e-42 | 183.0 |
84 | TraesCS7B01G370800 | chr4B | 85.714 | 406 | 31 | 12 | 1360 | 1750 | 20175986 | 20176379 | 1.850000e-108 | 403.0 |
85 | TraesCS7B01G370800 | chr1A | 84.865 | 370 | 27 | 17 | 1360 | 1713 | 172893300 | 172892944 | 3.160000e-91 | 346.0 |
86 | TraesCS7B01G370800 | chr1A | 91.705 | 217 | 18 | 0 | 2790 | 3006 | 116876938 | 116876722 | 6.950000e-78 | 302.0 |
87 | TraesCS7B01G370800 | chr1A | 83.476 | 351 | 18 | 8 | 436 | 746 | 466351283 | 466351633 | 1.500000e-74 | 291.0 |
88 | TraesCS7B01G370800 | chr1A | 93.548 | 124 | 8 | 0 | 3927 | 4050 | 564417011 | 564417134 | 7.300000e-43 | 185.0 |
89 | TraesCS7B01G370800 | chr1A | 91.176 | 102 | 3 | 2 | 112 | 212 | 65238106 | 65238010 | 2.680000e-27 | 134.0 |
90 | TraesCS7B01G370800 | chr1A | 91.176 | 102 | 3 | 2 | 112 | 212 | 65258810 | 65258906 | 2.680000e-27 | 134.0 |
91 | TraesCS7B01G370800 | chr1A | 97.143 | 35 | 1 | 0 | 362 | 396 | 466350279 | 466350313 | 4.620000e-05 | 60.2 |
92 | TraesCS7B01G370800 | chr4A | 92.917 | 240 | 11 | 3 | 1 | 240 | 693874402 | 693874635 | 1.140000e-90 | 344.0 |
93 | TraesCS7B01G370800 | chr4A | 86.186 | 333 | 24 | 2 | 436 | 746 | 693875094 | 693875426 | 1.470000e-89 | 340.0 |
94 | TraesCS7B01G370800 | chr4A | 85.755 | 351 | 10 | 10 | 436 | 746 | 678412341 | 678411991 | 6.850000e-88 | 335.0 |
95 | TraesCS7B01G370800 | chr4A | 92.627 | 217 | 16 | 0 | 2790 | 3006 | 440621840 | 440621624 | 3.210000e-81 | 313.0 |
96 | TraesCS7B01G370800 | chr4A | 88.546 | 227 | 18 | 5 | 2573 | 2792 | 610426400 | 610426175 | 7.040000e-68 | 268.0 |
97 | TraesCS7B01G370800 | chr4A | 85.561 | 187 | 6 | 4 | 436 | 601 | 11175491 | 11175677 | 4.390000e-40 | 176.0 |
98 | TraesCS7B01G370800 | chr4A | 95.455 | 66 | 2 | 1 | 186 | 250 | 678412999 | 678412934 | 2.100000e-18 | 104.0 |
99 | TraesCS7B01G370800 | chr1B | 85.981 | 321 | 35 | 8 | 1769 | 2086 | 677993051 | 677992738 | 6.850000e-88 | 335.0 |
100 | TraesCS7B01G370800 | chr1B | 85.714 | 350 | 10 | 12 | 437 | 746 | 29768262 | 29767913 | 2.460000e-87 | 333.0 |
101 | TraesCS7B01G370800 | chr1B | 83.183 | 333 | 28 | 7 | 436 | 746 | 322465074 | 322464748 | 3.250000e-71 | 279.0 |
102 | TraesCS7B01G370800 | chr1B | 98.039 | 51 | 1 | 0 | 85 | 135 | 161783783 | 161783733 | 5.890000e-14 | 89.8 |
103 | TraesCS7B01G370800 | chr1D | 92.166 | 217 | 17 | 0 | 2790 | 3006 | 241631962 | 241632178 | 1.490000e-79 | 307.0 |
104 | TraesCS7B01G370800 | chr1D | 88.525 | 183 | 15 | 5 | 2299 | 2478 | 486866771 | 486866592 | 2.590000e-52 | 217.0 |
105 | TraesCS7B01G370800 | chr1D | 91.176 | 102 | 3 | 2 | 112 | 212 | 207146291 | 207146195 | 2.680000e-27 | 134.0 |
106 | TraesCS7B01G370800 | chr1D | 91.176 | 102 | 3 | 2 | 112 | 212 | 408522612 | 408522708 | 2.680000e-27 | 134.0 |
107 | TraesCS7B01G370800 | chr1D | 100.000 | 51 | 0 | 0 | 85 | 135 | 105047811 | 105047861 | 1.270000e-15 | 95.3 |
108 | TraesCS7B01G370800 | chr6D | 88.839 | 224 | 17 | 5 | 2576 | 2792 | 76675458 | 76675236 | 7.040000e-68 | 268.0 |
109 | TraesCS7B01G370800 | chr6D | 91.176 | 102 | 3 | 2 | 112 | 212 | 76077993 | 76077897 | 2.680000e-27 | 134.0 |
110 | TraesCS7B01G370800 | chr6B | 81.579 | 342 | 22 | 6 | 436 | 746 | 38074135 | 38074466 | 1.190000e-60 | 244.0 |
111 | TraesCS7B01G370800 | chr6B | 89.362 | 141 | 15 | 0 | 3915 | 4055 | 596493095 | 596493235 | 1.220000e-40 | 178.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS7B01G370800 | chr7B | 636624334 | 636628607 | 4273 | True | 7893.000000 | 7893 | 100.000000 | 1 | 4274 | 1 | chr7B.!!$R2 | 4273 |
1 | TraesCS7B01G370800 | chr7A | 665377917 | 665379944 | 2027 | True | 2606.000000 | 2606 | 90.109000 | 751 | 2792 | 1 | chr7A.!!$R2 | 2041 |
2 | TraesCS7B01G370800 | chr2B | 734854548 | 734857147 | 2599 | False | 1074.333333 | 2268 | 92.783667 | 888 | 3307 | 3 | chr2B.!!$F5 | 2419 |
3 | TraesCS7B01G370800 | chr7D | 575362582 | 575363726 | 1144 | True | 1171.000000 | 1171 | 85.561000 | 439 | 1611 | 1 | chr7D.!!$R1 | 1172 |
4 | TraesCS7B01G370800 | chr5B | 610546049 | 610546993 | 944 | True | 961.000000 | 961 | 85.950000 | 839 | 1749 | 1 | chr5B.!!$R6 | 910 |
5 | TraesCS7B01G370800 | chr5B | 555011079 | 555011588 | 509 | False | 436.000000 | 436 | 83.012000 | 1986 | 2475 | 1 | chr5B.!!$F1 | 489 |
6 | TraesCS7B01G370800 | chr5B | 112253055 | 112254112 | 1057 | True | 203.000000 | 302 | 89.750500 | 186 | 746 | 2 | chr5B.!!$R8 | 560 |
7 | TraesCS7B01G370800 | chr5A | 617236066 | 617237631 | 1565 | True | 661.500000 | 933 | 88.034500 | 839 | 3306 | 2 | chr5A.!!$R4 | 2467 |
8 | TraesCS7B01G370800 | chr3B | 739981216 | 739983072 | 1856 | True | 627.500000 | 785 | 89.985000 | 1745 | 2348 | 2 | chr3B.!!$R2 | 603 |
9 | TraesCS7B01G370800 | chr5D | 494235361 | 494236885 | 1524 | True | 580.500000 | 769 | 89.453500 | 830 | 3290 | 2 | chr5D.!!$R3 | 2460 |
10 | TraesCS7B01G370800 | chr5D | 454119495 | 454120009 | 514 | False | 462.000000 | 462 | 83.846000 | 1986 | 2475 | 1 | chr5D.!!$F2 | 489 |
11 | TraesCS7B01G370800 | chr3A | 693459522 | 693461328 | 1806 | True | 602.000000 | 758 | 89.506000 | 1759 | 2443 | 2 | chr3A.!!$R4 | 684 |
12 | TraesCS7B01G370800 | chr4D | 220052539 | 220053911 | 1372 | True | 461.500000 | 614 | 89.520500 | 1 | 746 | 2 | chr4D.!!$R2 | 745 |
13 | TraesCS7B01G370800 | chr3D | 557703261 | 557704819 | 1558 | True | 282.250000 | 407 | 90.201500 | 1749 | 2478 | 4 | chr3D.!!$R2 | 729 |
14 | TraesCS7B01G370800 | chr2A | 383628646 | 383630135 | 1489 | False | 316.500000 | 414 | 85.221500 | 3450 | 4268 | 2 | chr2A.!!$F3 | 818 |
15 | TraesCS7B01G370800 | chr2D | 403327795 | 403328307 | 512 | True | 396.000000 | 396 | 81.644000 | 1984 | 2475 | 1 | chr2D.!!$R2 | 491 |
16 | TraesCS7B01G370800 | chr2D | 632287821 | 632289275 | 1454 | False | 298.000000 | 411 | 86.333500 | 3453 | 4274 | 2 | chr2D.!!$F4 | 821 |
17 | TraesCS7B01G370800 | chr4A | 693874402 | 693875426 | 1024 | False | 342.000000 | 344 | 89.551500 | 1 | 746 | 2 | chr4A.!!$F2 | 745 |
18 | TraesCS7B01G370800 | chr4A | 678411991 | 678412999 | 1008 | True | 219.500000 | 335 | 90.605000 | 186 | 746 | 2 | chr4A.!!$R3 | 560 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
628 | 1245 | 0.034670 | AGGGGAGAATCTGCTGCAAC | 60.035 | 55.000 | 3.02 | 0.00 | 33.73 | 4.17 | F |
1073 | 1747 | 1.200948 | GTGTGCTGATTCTTCTTGGGC | 59.799 | 52.381 | 0.00 | 0.00 | 0.00 | 5.36 | F |
2989 | 6145 | 0.035534 | ATGACGTGCATGCCCTGTAA | 60.036 | 50.000 | 16.68 | 4.33 | 35.42 | 2.41 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1610 | 2739 | 1.202452 | GGCAAGAAACAAACTGCTGCT | 60.202 | 47.619 | 0.0 | 0.0 | 0.0 | 4.24 | R |
2992 | 6148 | 0.033405 | TACTCCCTCCCTCCTTGTCG | 60.033 | 60.000 | 0.0 | 0.0 | 0.0 | 4.35 | R |
4240 | 8732 | 0.257039 | ATCTTCATGTGTCCCAGCCC | 59.743 | 55.000 | 0.0 | 0.0 | 0.0 | 5.19 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
139 | 140 | 5.614308 | CCATGTCAAGCATAGATAGGTTCA | 58.386 | 41.667 | 0.00 | 0.00 | 35.74 | 3.18 |
141 | 142 | 6.713903 | CCATGTCAAGCATAGATAGGTTCAAT | 59.286 | 38.462 | 0.00 | 0.00 | 35.74 | 2.57 |
142 | 143 | 7.230108 | CCATGTCAAGCATAGATAGGTTCAATT | 59.770 | 37.037 | 0.00 | 0.00 | 35.74 | 2.32 |
143 | 144 | 7.792374 | TGTCAAGCATAGATAGGTTCAATTC | 57.208 | 36.000 | 0.00 | 0.00 | 0.00 | 2.17 |
155 | 156 | 9.822185 | AGATAGGTTCAATTCAATTAATTTGCC | 57.178 | 29.630 | 0.00 | 0.00 | 35.54 | 4.52 |
200 | 201 | 5.577164 | CACTACTAGTGTATGCTTTGACACC | 59.423 | 44.000 | 5.39 | 0.00 | 45.81 | 4.16 |
240 | 572 | 6.088016 | TGCAAGAGTTTTGCTTGATGTTAT | 57.912 | 33.333 | 18.18 | 0.00 | 44.16 | 1.89 |
241 | 573 | 7.213216 | TGCAAGAGTTTTGCTTGATGTTATA | 57.787 | 32.000 | 18.18 | 0.00 | 44.16 | 0.98 |
242 | 574 | 7.083858 | TGCAAGAGTTTTGCTTGATGTTATAC | 58.916 | 34.615 | 18.18 | 0.00 | 44.16 | 1.47 |
244 | 576 | 7.272084 | GCAAGAGTTTTGCTTGATGTTATACTG | 59.728 | 37.037 | 10.98 | 0.00 | 44.16 | 2.74 |
246 | 578 | 8.396272 | AGAGTTTTGCTTGATGTTATACTGTT | 57.604 | 30.769 | 0.00 | 0.00 | 0.00 | 3.16 |
247 | 579 | 8.292448 | AGAGTTTTGCTTGATGTTATACTGTTG | 58.708 | 33.333 | 0.00 | 0.00 | 0.00 | 3.33 |
249 | 581 | 8.076178 | AGTTTTGCTTGATGTTATACTGTTGTC | 58.924 | 33.333 | 0.00 | 0.00 | 0.00 | 3.18 |
251 | 583 | 4.941263 | TGCTTGATGTTATACTGTTGTCCC | 59.059 | 41.667 | 0.00 | 0.00 | 0.00 | 4.46 |
270 | 622 | 5.600484 | TGTCCCATTTTTACAACCTCAACAT | 59.400 | 36.000 | 0.00 | 0.00 | 0.00 | 2.71 |
271 | 623 | 6.778069 | TGTCCCATTTTTACAACCTCAACATA | 59.222 | 34.615 | 0.00 | 0.00 | 0.00 | 2.29 |
272 | 624 | 7.453126 | TGTCCCATTTTTACAACCTCAACATAT | 59.547 | 33.333 | 0.00 | 0.00 | 0.00 | 1.78 |
292 | 644 | 9.586435 | AACATATTTAAATTGCAAAGTAGAGCC | 57.414 | 29.630 | 1.71 | 0.00 | 0.00 | 4.70 |
293 | 645 | 8.748412 | ACATATTTAAATTGCAAAGTAGAGCCA | 58.252 | 29.630 | 1.71 | 0.00 | 0.00 | 4.75 |
294 | 646 | 9.023967 | CATATTTAAATTGCAAAGTAGAGCCAC | 57.976 | 33.333 | 1.71 | 0.00 | 0.00 | 5.01 |
298 | 650 | 2.638480 | TGCAAAGTAGAGCCACAAGT | 57.362 | 45.000 | 0.00 | 0.00 | 0.00 | 3.16 |
303 | 655 | 3.857157 | AAGTAGAGCCACAAGTCCAAA | 57.143 | 42.857 | 0.00 | 0.00 | 0.00 | 3.28 |
304 | 656 | 3.127425 | AGTAGAGCCACAAGTCCAAAC | 57.873 | 47.619 | 0.00 | 0.00 | 0.00 | 2.93 |
305 | 657 | 2.152016 | GTAGAGCCACAAGTCCAAACC | 58.848 | 52.381 | 0.00 | 0.00 | 0.00 | 3.27 |
306 | 658 | 0.846693 | AGAGCCACAAGTCCAAACCT | 59.153 | 50.000 | 0.00 | 0.00 | 0.00 | 3.50 |
311 | 663 | 2.691011 | GCCACAAGTCCAAACCTAAACA | 59.309 | 45.455 | 0.00 | 0.00 | 0.00 | 2.83 |
312 | 664 | 3.320826 | GCCACAAGTCCAAACCTAAACAT | 59.679 | 43.478 | 0.00 | 0.00 | 0.00 | 2.71 |
315 | 667 | 6.295067 | GCCACAAGTCCAAACCTAAACATATT | 60.295 | 38.462 | 0.00 | 0.00 | 0.00 | 1.28 |
316 | 668 | 7.312899 | CCACAAGTCCAAACCTAAACATATTC | 58.687 | 38.462 | 0.00 | 0.00 | 0.00 | 1.75 |
317 | 669 | 7.040062 | CCACAAGTCCAAACCTAAACATATTCA | 60.040 | 37.037 | 0.00 | 0.00 | 0.00 | 2.57 |
318 | 670 | 8.023128 | CACAAGTCCAAACCTAAACATATTCAG | 58.977 | 37.037 | 0.00 | 0.00 | 0.00 | 3.02 |
320 | 672 | 8.792633 | CAAGTCCAAACCTAAACATATTCAGAA | 58.207 | 33.333 | 0.00 | 0.00 | 0.00 | 3.02 |
325 | 677 | 8.792633 | CCAAACCTAAACATATTCAGAAACTGA | 58.207 | 33.333 | 0.00 | 0.00 | 38.87 | 3.41 |
338 | 690 | 7.985634 | TTCAGAAACTGAACATTTTTACAGC | 57.014 | 32.000 | 9.67 | 0.00 | 44.27 | 4.40 |
340 | 692 | 6.321181 | TCAGAAACTGAACATTTTTACAGCCT | 59.679 | 34.615 | 0.00 | 0.00 | 37.57 | 4.58 |
348 | 851 | 9.260002 | CTGAACATTTTTACAGCCTAAACATTT | 57.740 | 29.630 | 0.00 | 0.00 | 0.00 | 2.32 |
354 | 857 | 5.782893 | TTACAGCCTAAACATTTGCAGTT | 57.217 | 34.783 | 0.00 | 0.00 | 0.00 | 3.16 |
357 | 860 | 4.827284 | ACAGCCTAAACATTTGCAGTTAGT | 59.173 | 37.500 | 0.00 | 0.00 | 0.00 | 2.24 |
361 | 864 | 4.218417 | CCTAAACATTTGCAGTTAGTGGCT | 59.782 | 41.667 | 0.00 | 0.00 | 0.00 | 4.75 |
362 | 865 | 3.923017 | AACATTTGCAGTTAGTGGCTC | 57.077 | 42.857 | 0.00 | 0.00 | 0.00 | 4.70 |
364 | 867 | 3.221771 | ACATTTGCAGTTAGTGGCTCAA | 58.778 | 40.909 | 0.00 | 0.00 | 0.00 | 3.02 |
365 | 868 | 3.636300 | ACATTTGCAGTTAGTGGCTCAAA | 59.364 | 39.130 | 0.00 | 0.00 | 0.00 | 2.69 |
368 | 874 | 2.930950 | TGCAGTTAGTGGCTCAAAACT | 58.069 | 42.857 | 2.63 | 2.63 | 32.52 | 2.66 |
370 | 876 | 2.618709 | GCAGTTAGTGGCTCAAAACTGT | 59.381 | 45.455 | 23.59 | 1.16 | 46.68 | 3.55 |
372 | 878 | 4.130118 | CAGTTAGTGGCTCAAAACTGTCT | 58.870 | 43.478 | 18.74 | 2.55 | 42.36 | 3.41 |
374 | 880 | 4.127171 | GTTAGTGGCTCAAAACTGTCTGA | 58.873 | 43.478 | 0.00 | 0.00 | 0.00 | 3.27 |
376 | 882 | 2.092968 | AGTGGCTCAAAACTGTCTGACA | 60.093 | 45.455 | 10.50 | 10.50 | 0.00 | 3.58 |
378 | 884 | 3.316308 | GTGGCTCAAAACTGTCTGACAAT | 59.684 | 43.478 | 12.16 | 0.00 | 0.00 | 2.71 |
379 | 885 | 3.316029 | TGGCTCAAAACTGTCTGACAATG | 59.684 | 43.478 | 12.16 | 8.67 | 0.00 | 2.82 |
380 | 886 | 3.565482 | GGCTCAAAACTGTCTGACAATGA | 59.435 | 43.478 | 12.16 | 12.03 | 0.00 | 2.57 |
382 | 888 | 5.412594 | GGCTCAAAACTGTCTGACAATGATA | 59.587 | 40.000 | 12.16 | 0.00 | 0.00 | 2.15 |
385 | 891 | 7.308229 | GCTCAAAACTGTCTGACAATGATACTT | 60.308 | 37.037 | 12.16 | 0.00 | 0.00 | 2.24 |
387 | 893 | 7.714813 | TCAAAACTGTCTGACAATGATACTTCA | 59.285 | 33.333 | 12.16 | 0.00 | 36.00 | 3.02 |
389 | 895 | 6.352016 | ACTGTCTGACAATGATACTTCACT | 57.648 | 37.500 | 12.16 | 0.00 | 33.85 | 3.41 |
391 | 897 | 6.648310 | ACTGTCTGACAATGATACTTCACTTG | 59.352 | 38.462 | 12.16 | 0.00 | 33.85 | 3.16 |
392 | 898 | 6.758254 | TGTCTGACAATGATACTTCACTTGA | 58.242 | 36.000 | 8.27 | 0.00 | 33.85 | 3.02 |
393 | 899 | 7.389232 | TGTCTGACAATGATACTTCACTTGAT | 58.611 | 34.615 | 8.27 | 0.00 | 33.85 | 2.57 |
394 | 900 | 7.332678 | TGTCTGACAATGATACTTCACTTGATG | 59.667 | 37.037 | 8.27 | 0.00 | 33.85 | 3.07 |
398 | 904 | 5.124457 | ACAATGATACTTCACTTGATGTGGC | 59.876 | 40.000 | 7.78 | 1.75 | 46.20 | 5.01 |
399 | 905 | 4.284829 | TGATACTTCACTTGATGTGGCA | 57.715 | 40.909 | 7.78 | 0.00 | 46.20 | 4.92 |
400 | 906 | 4.256110 | TGATACTTCACTTGATGTGGCAG | 58.744 | 43.478 | 7.78 | 0.00 | 46.20 | 4.85 |
401 | 907 | 1.901591 | ACTTCACTTGATGTGGCAGG | 58.098 | 50.000 | 0.00 | 0.00 | 46.20 | 4.85 |
402 | 908 | 1.143684 | ACTTCACTTGATGTGGCAGGT | 59.856 | 47.619 | 0.00 | 0.00 | 46.20 | 4.00 |
403 | 909 | 1.808945 | CTTCACTTGATGTGGCAGGTC | 59.191 | 52.381 | 0.00 | 0.00 | 46.20 | 3.85 |
404 | 910 | 0.036732 | TCACTTGATGTGGCAGGTCC | 59.963 | 55.000 | 0.00 | 0.00 | 46.20 | 4.46 |
409 | 915 | 1.448540 | GATGTGGCAGGTCCTGTCG | 60.449 | 63.158 | 18.59 | 0.00 | 39.18 | 4.35 |
411 | 917 | 0.902984 | ATGTGGCAGGTCCTGTCGTA | 60.903 | 55.000 | 18.59 | 10.22 | 39.18 | 3.43 |
412 | 918 | 1.116536 | TGTGGCAGGTCCTGTCGTAA | 61.117 | 55.000 | 18.59 | 3.81 | 39.18 | 3.18 |
413 | 919 | 0.249398 | GTGGCAGGTCCTGTCGTAAT | 59.751 | 55.000 | 18.59 | 0.00 | 39.18 | 1.89 |
417 | 923 | 1.479323 | GCAGGTCCTGTCGTAATGGTA | 59.521 | 52.381 | 20.24 | 0.00 | 33.43 | 3.25 |
420 | 926 | 1.826720 | GGTCCTGTCGTAATGGTACCA | 59.173 | 52.381 | 18.99 | 18.99 | 0.00 | 3.25 |
421 | 927 | 2.417787 | GGTCCTGTCGTAATGGTACCAC | 60.418 | 54.545 | 19.09 | 3.50 | 0.00 | 4.16 |
423 | 929 | 3.101437 | TCCTGTCGTAATGGTACCACAT | 58.899 | 45.455 | 19.09 | 12.11 | 31.93 | 3.21 |
424 | 930 | 3.516300 | TCCTGTCGTAATGGTACCACATT | 59.484 | 43.478 | 19.09 | 11.55 | 43.13 | 2.71 |
426 | 932 | 5.187381 | TCCTGTCGTAATGGTACCACATTTA | 59.813 | 40.000 | 19.09 | 9.63 | 41.12 | 1.40 |
427 | 933 | 5.522460 | CCTGTCGTAATGGTACCACATTTAG | 59.478 | 44.000 | 19.09 | 9.74 | 41.12 | 1.85 |
430 | 936 | 5.006358 | GTCGTAATGGTACCACATTTAGCAG | 59.994 | 44.000 | 19.09 | 7.03 | 41.12 | 4.24 |
431 | 937 | 4.272504 | CGTAATGGTACCACATTTAGCAGG | 59.727 | 45.833 | 19.09 | 0.00 | 41.12 | 4.85 |
432 | 938 | 2.122783 | TGGTACCACATTTAGCAGGC | 57.877 | 50.000 | 11.60 | 0.00 | 0.00 | 4.85 |
525 | 1121 | 0.105039 | CTGGTATGCTCGGGAAGGAC | 59.895 | 60.000 | 0.00 | 0.00 | 0.00 | 3.85 |
582 | 1199 | 1.574428 | CGGGCTCGTTTTTGGAGTG | 59.426 | 57.895 | 0.00 | 0.00 | 34.00 | 3.51 |
583 | 1200 | 1.852067 | CGGGCTCGTTTTTGGAGTGG | 61.852 | 60.000 | 0.00 | 0.00 | 34.00 | 4.00 |
584 | 1201 | 1.524008 | GGGCTCGTTTTTGGAGTGGG | 61.524 | 60.000 | 0.00 | 0.00 | 34.00 | 4.61 |
586 | 1203 | 1.524008 | GCTCGTTTTTGGAGTGGGGG | 61.524 | 60.000 | 0.00 | 0.00 | 34.00 | 5.40 |
587 | 1204 | 1.524008 | CTCGTTTTTGGAGTGGGGGC | 61.524 | 60.000 | 0.00 | 0.00 | 0.00 | 5.80 |
590 | 1207 | 1.836604 | TTTTTGGAGTGGGGGCAGC | 60.837 | 57.895 | 0.00 | 0.00 | 0.00 | 5.25 |
591 | 1208 | 2.310930 | TTTTTGGAGTGGGGGCAGCT | 62.311 | 55.000 | 0.00 | 0.00 | 0.00 | 4.24 |
592 | 1209 | 2.713531 | TTTTGGAGTGGGGGCAGCTC | 62.714 | 60.000 | 0.00 | 0.00 | 0.00 | 4.09 |
595 | 1212 | 4.106925 | GAGTGGGGGCAGCTCCTG | 62.107 | 72.222 | 12.38 | 0.00 | 34.39 | 3.86 |
596 | 1213 | 4.990910 | AGTGGGGGCAGCTCCTGT | 62.991 | 66.667 | 12.38 | 0.00 | 33.43 | 4.00 |
625 | 1242 | 4.555610 | CAGGGGAGAATCTGCTGC | 57.444 | 61.111 | 1.01 | 0.00 | 33.73 | 5.25 |
627 | 1244 | 0.034767 | CAGGGGAGAATCTGCTGCAA | 60.035 | 55.000 | 3.02 | 0.00 | 33.73 | 4.08 |
628 | 1245 | 0.034670 | AGGGGAGAATCTGCTGCAAC | 60.035 | 55.000 | 3.02 | 0.00 | 33.73 | 4.17 |
746 | 1363 | 4.378874 | GGTTGCTTTGAGAGAATTCGAAGG | 60.379 | 45.833 | 3.35 | 0.00 | 38.49 | 3.46 |
747 | 1364 | 2.744202 | TGCTTTGAGAGAATTCGAAGGC | 59.256 | 45.455 | 3.35 | 5.04 | 38.49 | 4.35 |
748 | 1365 | 2.096657 | GCTTTGAGAGAATTCGAAGGCC | 59.903 | 50.000 | 3.35 | 0.00 | 38.49 | 5.19 |
749 | 1366 | 2.010145 | TTGAGAGAATTCGAAGGCCG | 57.990 | 50.000 | 3.35 | 0.00 | 40.25 | 6.13 |
816 | 1439 | 2.545742 | CCAGAAAAAGGCCCGTTCAAAG | 60.546 | 50.000 | 0.00 | 0.00 | 0.00 | 2.77 |
817 | 1440 | 2.360801 | CAGAAAAAGGCCCGTTCAAAGA | 59.639 | 45.455 | 0.00 | 0.00 | 0.00 | 2.52 |
818 | 1441 | 2.623416 | AGAAAAAGGCCCGTTCAAAGAG | 59.377 | 45.455 | 0.00 | 0.00 | 0.00 | 2.85 |
819 | 1442 | 1.328279 | AAAAGGCCCGTTCAAAGAGG | 58.672 | 50.000 | 0.00 | 0.00 | 0.00 | 3.69 |
916 | 1551 | 2.676471 | CCCCGCCTCCAAAACCTG | 60.676 | 66.667 | 0.00 | 0.00 | 0.00 | 4.00 |
924 | 1559 | 1.901650 | CTCCAAAACCTGAGACGCGC | 61.902 | 60.000 | 5.73 | 0.00 | 0.00 | 6.86 |
948 | 1589 | 3.083997 | CAACCTCCTCCCCCTCCG | 61.084 | 72.222 | 0.00 | 0.00 | 0.00 | 4.63 |
1070 | 1744 | 2.414481 | CCTCGTGTGCTGATTCTTCTTG | 59.586 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
1071 | 1745 | 2.414481 | CTCGTGTGCTGATTCTTCTTGG | 59.586 | 50.000 | 0.00 | 0.00 | 0.00 | 3.61 |
1072 | 1746 | 1.466167 | CGTGTGCTGATTCTTCTTGGG | 59.534 | 52.381 | 0.00 | 0.00 | 0.00 | 4.12 |
1073 | 1747 | 1.200948 | GTGTGCTGATTCTTCTTGGGC | 59.799 | 52.381 | 0.00 | 0.00 | 0.00 | 5.36 |
1076 | 1750 | 1.997928 | GCTGATTCTTCTTGGGCCGC | 61.998 | 60.000 | 0.00 | 0.00 | 0.00 | 6.53 |
1227 | 1901 | 2.048222 | TCTGCAAGAAGGCCGACG | 60.048 | 61.111 | 0.00 | 0.00 | 42.31 | 5.12 |
1310 | 2402 | 2.743928 | GCCTGAGCCGTTCTGTGG | 60.744 | 66.667 | 0.00 | 0.00 | 0.00 | 4.17 |
1311 | 2403 | 2.743718 | CCTGAGCCGTTCTGTGGT | 59.256 | 61.111 | 0.00 | 0.00 | 0.00 | 4.16 |
1312 | 2404 | 1.669115 | CCTGAGCCGTTCTGTGGTG | 60.669 | 63.158 | 0.00 | 0.00 | 0.00 | 4.17 |
1313 | 2405 | 1.669115 | CTGAGCCGTTCTGTGGTGG | 60.669 | 63.158 | 0.00 | 0.00 | 0.00 | 4.61 |
1401 | 2500 | 3.365265 | CGCCAGTTCAAGGTGCCC | 61.365 | 66.667 | 0.00 | 0.00 | 0.00 | 5.36 |
1518 | 2625 | 3.704061 | AGAGGCTCAAGAAGATCAGGTAC | 59.296 | 47.826 | 18.26 | 0.00 | 0.00 | 3.34 |
1519 | 2626 | 3.704061 | GAGGCTCAAGAAGATCAGGTACT | 59.296 | 47.826 | 10.25 | 0.00 | 43.88 | 2.73 |
1546 | 2674 | 2.036992 | TGCCCCTTGCTATTTGTTGTTG | 59.963 | 45.455 | 0.00 | 0.00 | 42.00 | 3.33 |
1547 | 2675 | 2.037121 | GCCCCTTGCTATTTGTTGTTGT | 59.963 | 45.455 | 0.00 | 0.00 | 36.87 | 3.32 |
1548 | 2676 | 3.494223 | GCCCCTTGCTATTTGTTGTTGTT | 60.494 | 43.478 | 0.00 | 0.00 | 36.87 | 2.83 |
1564 | 2693 | 7.817641 | TGTTGTTGTTGTATGACTTTGTGTTA | 58.182 | 30.769 | 0.00 | 0.00 | 0.00 | 2.41 |
1565 | 2694 | 7.965655 | TGTTGTTGTTGTATGACTTTGTGTTAG | 59.034 | 33.333 | 0.00 | 0.00 | 0.00 | 2.34 |
1566 | 2695 | 7.851387 | TGTTGTTGTATGACTTTGTGTTAGA | 57.149 | 32.000 | 0.00 | 0.00 | 0.00 | 2.10 |
1610 | 2739 | 5.664457 | CTTGCACTTCACATATCAGGACTA | 58.336 | 41.667 | 0.00 | 0.00 | 0.00 | 2.59 |
1611 | 2740 | 5.268118 | TGCACTTCACATATCAGGACTAG | 57.732 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
1612 | 2741 | 4.054671 | GCACTTCACATATCAGGACTAGC | 58.945 | 47.826 | 0.00 | 0.00 | 0.00 | 3.42 |
1623 | 2763 | 2.104792 | TCAGGACTAGCAGCAGTTTGTT | 59.895 | 45.455 | 0.00 | 0.00 | 0.00 | 2.83 |
1634 | 2774 | 1.136891 | GCAGTTTGTTTCTTGCCTGGT | 59.863 | 47.619 | 0.00 | 0.00 | 0.00 | 4.00 |
1635 | 2775 | 2.360801 | GCAGTTTGTTTCTTGCCTGGTA | 59.639 | 45.455 | 0.00 | 0.00 | 0.00 | 3.25 |
1636 | 2776 | 3.550842 | GCAGTTTGTTTCTTGCCTGGTAG | 60.551 | 47.826 | 0.00 | 0.00 | 0.00 | 3.18 |
1803 | 3021 | 9.903682 | TTCATTTGATTCAATCTCAAACTTCTC | 57.096 | 29.630 | 0.00 | 0.00 | 43.31 | 2.87 |
1804 | 3022 | 8.232513 | TCATTTGATTCAATCTCAAACTTCTCG | 58.767 | 33.333 | 0.00 | 0.00 | 43.31 | 4.04 |
1972 | 3194 | 6.292488 | GCACTGAACTGAATTTTGTTTGGATG | 60.292 | 38.462 | 0.00 | 0.00 | 0.00 | 3.51 |
1973 | 3195 | 6.757947 | CACTGAACTGAATTTTGTTTGGATGT | 59.242 | 34.615 | 0.00 | 0.00 | 0.00 | 3.06 |
2067 | 3290 | 1.070289 | ACAGTGAGAAGGAAACGGGTC | 59.930 | 52.381 | 0.00 | 0.00 | 0.00 | 4.46 |
2627 | 5772 | 5.069781 | ACTTCTGCCAGCTCTAGGTTATAAG | 59.930 | 44.000 | 0.00 | 0.00 | 0.00 | 1.73 |
2789 | 5945 | 6.439375 | TGTATTCATGTGTACCCTTCTAGTGT | 59.561 | 38.462 | 0.00 | 0.00 | 0.00 | 3.55 |
2790 | 5946 | 7.616542 | TGTATTCATGTGTACCCTTCTAGTGTA | 59.383 | 37.037 | 0.00 | 0.00 | 0.00 | 2.90 |
2791 | 5947 | 5.909621 | TCATGTGTACCCTTCTAGTGTAC | 57.090 | 43.478 | 0.00 | 0.00 | 36.30 | 2.90 |
2792 | 5948 | 5.577100 | TCATGTGTACCCTTCTAGTGTACT | 58.423 | 41.667 | 0.00 | 0.00 | 36.63 | 2.73 |
2793 | 5949 | 5.651139 | TCATGTGTACCCTTCTAGTGTACTC | 59.349 | 44.000 | 0.00 | 0.00 | 36.63 | 2.59 |
2794 | 5950 | 4.338879 | TGTGTACCCTTCTAGTGTACTCC | 58.661 | 47.826 | 0.00 | 0.00 | 36.63 | 3.85 |
2795 | 5951 | 3.698539 | GTGTACCCTTCTAGTGTACTCCC | 59.301 | 52.174 | 0.00 | 0.00 | 36.63 | 4.30 |
2796 | 5952 | 3.595138 | TGTACCCTTCTAGTGTACTCCCT | 59.405 | 47.826 | 0.00 | 0.00 | 36.63 | 4.20 |
2797 | 5953 | 3.385314 | ACCCTTCTAGTGTACTCCCTC | 57.615 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
2798 | 5954 | 2.024177 | ACCCTTCTAGTGTACTCCCTCC | 60.024 | 54.545 | 0.00 | 0.00 | 0.00 | 4.30 |
2799 | 5955 | 2.299521 | CCTTCTAGTGTACTCCCTCCG | 58.700 | 57.143 | 0.00 | 0.00 | 0.00 | 4.63 |
2800 | 5956 | 2.356947 | CCTTCTAGTGTACTCCCTCCGT | 60.357 | 54.545 | 0.00 | 0.00 | 0.00 | 4.69 |
2801 | 5957 | 2.706339 | TCTAGTGTACTCCCTCCGTC | 57.294 | 55.000 | 0.00 | 0.00 | 0.00 | 4.79 |
2802 | 5958 | 2.194859 | TCTAGTGTACTCCCTCCGTCT | 58.805 | 52.381 | 0.00 | 0.00 | 0.00 | 4.18 |
2803 | 5959 | 2.170187 | TCTAGTGTACTCCCTCCGTCTC | 59.830 | 54.545 | 0.00 | 0.00 | 0.00 | 3.36 |
2804 | 5960 | 0.392729 | AGTGTACTCCCTCCGTCTCG | 60.393 | 60.000 | 0.00 | 0.00 | 0.00 | 4.04 |
2816 | 5972 | 1.226603 | CGTCTCGGTTTAGAGGGCG | 60.227 | 63.158 | 0.00 | 0.00 | 38.71 | 6.13 |
2818 | 5974 | 0.458025 | GTCTCGGTTTAGAGGGCGTG | 60.458 | 60.000 | 0.00 | 0.00 | 38.71 | 5.34 |
2822 | 5978 | 2.388232 | GGTTTAGAGGGCGTGTGCG | 61.388 | 63.158 | 0.00 | 0.00 | 44.10 | 5.34 |
2824 | 5980 | 0.388907 | GTTTAGAGGGCGTGTGCGTA | 60.389 | 55.000 | 0.00 | 0.00 | 44.10 | 4.42 |
2826 | 5982 | 1.246056 | TTAGAGGGCGTGTGCGTACT | 61.246 | 55.000 | 4.97 | 0.00 | 44.10 | 2.73 |
2827 | 5983 | 1.246056 | TAGAGGGCGTGTGCGTACTT | 61.246 | 55.000 | 4.97 | 0.00 | 44.10 | 2.24 |
2830 | 5986 | 1.213537 | GGGCGTGTGCGTACTTCTA | 59.786 | 57.895 | 4.97 | 0.00 | 44.10 | 2.10 |
2832 | 5988 | 0.801067 | GGCGTGTGCGTACTTCTAGG | 60.801 | 60.000 | 4.97 | 0.00 | 44.10 | 3.02 |
2833 | 5989 | 0.109412 | GCGTGTGCGTACTTCTAGGT | 60.109 | 55.000 | 4.97 | 0.00 | 40.81 | 3.08 |
2837 | 5993 | 3.436496 | GTGTGCGTACTTCTAGGTCATC | 58.564 | 50.000 | 4.97 | 0.00 | 0.00 | 2.92 |
2841 | 5997 | 3.704566 | TGCGTACTTCTAGGTCATCCATT | 59.295 | 43.478 | 0.00 | 0.00 | 35.89 | 3.16 |
2843 | 5999 | 4.508124 | GCGTACTTCTAGGTCATCCATTTG | 59.492 | 45.833 | 0.00 | 0.00 | 35.89 | 2.32 |
2844 | 6000 | 5.681437 | GCGTACTTCTAGGTCATCCATTTGA | 60.681 | 44.000 | 0.00 | 0.00 | 35.89 | 2.69 |
2845 | 6001 | 5.749109 | CGTACTTCTAGGTCATCCATTTGAC | 59.251 | 44.000 | 0.00 | 0.00 | 44.27 | 3.18 |
2846 | 6002 | 6.405953 | CGTACTTCTAGGTCATCCATTTGACT | 60.406 | 42.308 | 4.75 | 0.00 | 44.39 | 3.41 |
2847 | 6003 | 7.201794 | CGTACTTCTAGGTCATCCATTTGACTA | 60.202 | 40.741 | 4.75 | 0.00 | 44.39 | 2.59 |
2848 | 6004 | 7.496346 | ACTTCTAGGTCATCCATTTGACTAA | 57.504 | 36.000 | 4.75 | 0.00 | 44.39 | 2.24 |
2849 | 6005 | 7.331791 | ACTTCTAGGTCATCCATTTGACTAAC | 58.668 | 38.462 | 4.75 | 0.00 | 44.39 | 2.34 |
2850 | 6006 | 7.181125 | ACTTCTAGGTCATCCATTTGACTAACT | 59.819 | 37.037 | 4.75 | 0.00 | 44.39 | 2.24 |
2851 | 6007 | 6.878317 | TCTAGGTCATCCATTTGACTAACTG | 58.122 | 40.000 | 4.75 | 0.00 | 44.39 | 3.16 |
2852 | 6008 | 5.762179 | AGGTCATCCATTTGACTAACTGA | 57.238 | 39.130 | 4.75 | 0.00 | 44.39 | 3.41 |
2854 | 6010 | 6.725364 | AGGTCATCCATTTGACTAACTGAAT | 58.275 | 36.000 | 4.75 | 0.00 | 44.39 | 2.57 |
2855 | 6011 | 7.861629 | AGGTCATCCATTTGACTAACTGAATA | 58.138 | 34.615 | 4.75 | 0.00 | 44.39 | 1.75 |
2856 | 6012 | 8.497745 | AGGTCATCCATTTGACTAACTGAATAT | 58.502 | 33.333 | 4.75 | 0.00 | 44.39 | 1.28 |
2857 | 6013 | 8.562892 | GGTCATCCATTTGACTAACTGAATATG | 58.437 | 37.037 | 4.75 | 0.00 | 44.39 | 1.78 |
2858 | 6014 | 9.330063 | GTCATCCATTTGACTAACTGAATATGA | 57.670 | 33.333 | 0.00 | 0.00 | 42.22 | 2.15 |
2859 | 6015 | 9.551734 | TCATCCATTTGACTAACTGAATATGAG | 57.448 | 33.333 | 0.00 | 0.00 | 0.00 | 2.90 |
2860 | 6016 | 9.334947 | CATCCATTTGACTAACTGAATATGAGT | 57.665 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
2861 | 6017 | 9.911788 | ATCCATTTGACTAACTGAATATGAGTT | 57.088 | 29.630 | 5.85 | 5.85 | 37.43 | 3.01 |
2876 | 6032 | 9.040939 | TGAATATGAGTTATATGTCACCAAACG | 57.959 | 33.333 | 0.00 | 0.00 | 32.30 | 3.60 |
2877 | 6033 | 8.958119 | AATATGAGTTATATGTCACCAAACGT | 57.042 | 30.769 | 0.00 | 0.00 | 32.30 | 3.99 |
2882 | 6038 | 9.687210 | TGAGTTATATGTCACCAAACGTATATC | 57.313 | 33.333 | 0.00 | 0.00 | 34.92 | 1.63 |
2883 | 6039 | 9.687210 | GAGTTATATGTCACCAAACGTATATCA | 57.313 | 33.333 | 0.00 | 0.00 | 34.92 | 2.15 |
2887 | 6043 | 6.618287 | ATGTCACCAAACGTATATCATTGG | 57.382 | 37.500 | 11.91 | 11.91 | 46.14 | 3.16 |
2888 | 6044 | 5.735766 | TGTCACCAAACGTATATCATTGGA | 58.264 | 37.500 | 18.78 | 0.00 | 44.01 | 3.53 |
2889 | 6045 | 6.353323 | TGTCACCAAACGTATATCATTGGAT | 58.647 | 36.000 | 18.78 | 3.39 | 44.01 | 3.41 |
2890 | 6046 | 6.826231 | TGTCACCAAACGTATATCATTGGATT | 59.174 | 34.615 | 18.78 | 0.00 | 44.01 | 3.01 |
2891 | 6047 | 7.011950 | TGTCACCAAACGTATATCATTGGATTC | 59.988 | 37.037 | 18.78 | 9.67 | 44.01 | 2.52 |
2892 | 6048 | 7.226720 | GTCACCAAACGTATATCATTGGATTCT | 59.773 | 37.037 | 18.78 | 0.00 | 44.01 | 2.40 |
2893 | 6049 | 7.773224 | TCACCAAACGTATATCATTGGATTCTT | 59.227 | 33.333 | 18.78 | 0.00 | 44.01 | 2.52 |
2894 | 6050 | 7.857389 | CACCAAACGTATATCATTGGATTCTTG | 59.143 | 37.037 | 18.78 | 4.93 | 44.01 | 3.02 |
2895 | 6051 | 7.773224 | ACCAAACGTATATCATTGGATTCTTGA | 59.227 | 33.333 | 18.78 | 0.00 | 44.01 | 3.02 |
2896 | 6052 | 8.620416 | CCAAACGTATATCATTGGATTCTTGAA | 58.380 | 33.333 | 8.46 | 0.00 | 44.01 | 2.69 |
2897 | 6053 | 9.438291 | CAAACGTATATCATTGGATTCTTGAAC | 57.562 | 33.333 | 0.00 | 0.00 | 34.89 | 3.18 |
2898 | 6054 | 7.408132 | ACGTATATCATTGGATTCTTGAACG | 57.592 | 36.000 | 0.00 | 0.00 | 34.89 | 3.95 |
2899 | 6055 | 6.423905 | ACGTATATCATTGGATTCTTGAACGG | 59.576 | 38.462 | 0.00 | 0.00 | 34.89 | 4.44 |
2900 | 6056 | 6.645003 | CGTATATCATTGGATTCTTGAACGGA | 59.355 | 38.462 | 0.00 | 0.00 | 34.89 | 4.69 |
2901 | 6057 | 7.331934 | CGTATATCATTGGATTCTTGAACGGAT | 59.668 | 37.037 | 0.00 | 0.00 | 34.89 | 4.18 |
2902 | 6058 | 5.762825 | ATCATTGGATTCTTGAACGGATG | 57.237 | 39.130 | 0.00 | 0.00 | 0.00 | 3.51 |
2903 | 6059 | 4.588899 | TCATTGGATTCTTGAACGGATGT | 58.411 | 39.130 | 0.00 | 0.00 | 0.00 | 3.06 |
2904 | 6060 | 5.739959 | TCATTGGATTCTTGAACGGATGTA | 58.260 | 37.500 | 0.00 | 0.00 | 0.00 | 2.29 |
2905 | 6061 | 5.817296 | TCATTGGATTCTTGAACGGATGTAG | 59.183 | 40.000 | 0.00 | 0.00 | 0.00 | 2.74 |
2906 | 6062 | 4.819105 | TGGATTCTTGAACGGATGTAGT | 57.181 | 40.909 | 0.00 | 0.00 | 0.00 | 2.73 |
2907 | 6063 | 5.160607 | TGGATTCTTGAACGGATGTAGTT | 57.839 | 39.130 | 0.00 | 0.00 | 34.07 | 2.24 |
2908 | 6064 | 5.556915 | TGGATTCTTGAACGGATGTAGTTT | 58.443 | 37.500 | 0.00 | 0.00 | 31.14 | 2.66 |
2909 | 6065 | 5.642063 | TGGATTCTTGAACGGATGTAGTTTC | 59.358 | 40.000 | 0.00 | 0.00 | 31.14 | 2.78 |
2910 | 6066 | 5.875359 | GGATTCTTGAACGGATGTAGTTTCT | 59.125 | 40.000 | 0.00 | 0.00 | 31.14 | 2.52 |
2911 | 6067 | 7.039882 | GGATTCTTGAACGGATGTAGTTTCTA | 58.960 | 38.462 | 0.00 | 0.00 | 31.14 | 2.10 |
2912 | 6068 | 7.711339 | GGATTCTTGAACGGATGTAGTTTCTAT | 59.289 | 37.037 | 0.00 | 0.00 | 31.14 | 1.98 |
2913 | 6069 | 9.745880 | GATTCTTGAACGGATGTAGTTTCTATA | 57.254 | 33.333 | 0.00 | 0.00 | 31.14 | 1.31 |
2914 | 6070 | 8.922058 | TTCTTGAACGGATGTAGTTTCTATAC | 57.078 | 34.615 | 0.00 | 0.00 | 31.14 | 1.47 |
2915 | 6071 | 8.058667 | TCTTGAACGGATGTAGTTTCTATACA | 57.941 | 34.615 | 0.00 | 0.00 | 37.53 | 2.29 |
2916 | 6072 | 8.692710 | TCTTGAACGGATGTAGTTTCTATACAT | 58.307 | 33.333 | 0.00 | 0.00 | 44.52 | 2.29 |
2917 | 6073 | 9.961265 | CTTGAACGGATGTAGTTTCTATACATA | 57.039 | 33.333 | 0.00 | 0.00 | 42.48 | 2.29 |
2975 | 6131 | 8.480643 | AGTTAAATTCTCAACCTAGAATGACG | 57.519 | 34.615 | 0.15 | 0.00 | 43.75 | 4.35 |
2976 | 6132 | 8.095169 | AGTTAAATTCTCAACCTAGAATGACGT | 58.905 | 33.333 | 0.00 | 0.00 | 43.75 | 4.34 |
2982 | 6138 | 1.656652 | ACCTAGAATGACGTGCATGC | 58.343 | 50.000 | 11.82 | 11.82 | 37.28 | 4.06 |
2984 | 6140 | 0.940126 | CTAGAATGACGTGCATGCCC | 59.060 | 55.000 | 16.68 | 1.56 | 37.28 | 5.36 |
2985 | 6141 | 0.541392 | TAGAATGACGTGCATGCCCT | 59.459 | 50.000 | 16.68 | 0.00 | 37.28 | 5.19 |
2986 | 6142 | 1.028330 | AGAATGACGTGCATGCCCTG | 61.028 | 55.000 | 16.68 | 7.32 | 37.28 | 4.45 |
2987 | 6143 | 1.303561 | AATGACGTGCATGCCCTGT | 60.304 | 52.632 | 16.68 | 10.85 | 37.28 | 4.00 |
2989 | 6145 | 0.035534 | ATGACGTGCATGCCCTGTAA | 60.036 | 50.000 | 16.68 | 4.33 | 35.42 | 2.41 |
2991 | 6147 | 0.168128 | GACGTGCATGCCCTGTAAAC | 59.832 | 55.000 | 16.68 | 3.42 | 0.00 | 2.01 |
2992 | 6148 | 1.241315 | ACGTGCATGCCCTGTAAACC | 61.241 | 55.000 | 16.68 | 0.00 | 0.00 | 3.27 |
2993 | 6149 | 1.506262 | GTGCATGCCCTGTAAACCG | 59.494 | 57.895 | 16.68 | 0.00 | 0.00 | 4.44 |
2994 | 6150 | 0.958382 | GTGCATGCCCTGTAAACCGA | 60.958 | 55.000 | 16.68 | 0.00 | 0.00 | 4.69 |
2995 | 6151 | 0.958382 | TGCATGCCCTGTAAACCGAC | 60.958 | 55.000 | 16.68 | 0.00 | 0.00 | 4.79 |
2997 | 6153 | 1.529226 | CATGCCCTGTAAACCGACAA | 58.471 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
2998 | 6154 | 1.468520 | CATGCCCTGTAAACCGACAAG | 59.531 | 52.381 | 0.00 | 0.00 | 0.00 | 3.16 |
3000 | 6156 | 0.035739 | GCCCTGTAAACCGACAAGGA | 59.964 | 55.000 | 0.00 | 0.00 | 45.00 | 3.36 |
3001 | 6157 | 1.944430 | GCCCTGTAAACCGACAAGGAG | 60.944 | 57.143 | 0.00 | 0.00 | 45.00 | 3.69 |
3002 | 6158 | 1.338769 | CCCTGTAAACCGACAAGGAGG | 60.339 | 57.143 | 0.00 | 0.00 | 45.00 | 4.30 |
3003 | 6159 | 1.338769 | CCTGTAAACCGACAAGGAGGG | 60.339 | 57.143 | 0.00 | 0.00 | 45.00 | 4.30 |
3006 | 6162 | 1.066358 | GTAAACCGACAAGGAGGGAGG | 60.066 | 57.143 | 0.00 | 0.00 | 45.00 | 4.30 |
3007 | 6163 | 1.489560 | AAACCGACAAGGAGGGAGGG | 61.490 | 60.000 | 0.00 | 0.00 | 45.00 | 4.30 |
3008 | 6164 | 2.038975 | CCGACAAGGAGGGAGGGA | 59.961 | 66.667 | 0.00 | 0.00 | 45.00 | 4.20 |
3009 | 6165 | 2.060980 | CCGACAAGGAGGGAGGGAG | 61.061 | 68.421 | 0.00 | 0.00 | 45.00 | 4.30 |
3070 | 6742 | 6.571150 | GCTTTGTTTCCAAGAGATGTATGCTT | 60.571 | 38.462 | 0.00 | 0.00 | 0.00 | 3.91 |
3071 | 6743 | 6.899393 | TTGTTTCCAAGAGATGTATGCTTT | 57.101 | 33.333 | 0.00 | 0.00 | 0.00 | 3.51 |
3084 | 6756 | 3.444742 | TGTATGCTTTTGCCTGATTCCTG | 59.555 | 43.478 | 0.00 | 0.00 | 46.87 | 3.86 |
3234 | 7008 | 1.119574 | AGCACACCAAGACTACCGGT | 61.120 | 55.000 | 13.98 | 13.98 | 0.00 | 5.28 |
3298 | 7072 | 3.697542 | TGCTTCACAAAGATGCTGCATAT | 59.302 | 39.130 | 16.23 | 9.95 | 45.09 | 1.78 |
3299 | 7073 | 4.883006 | TGCTTCACAAAGATGCTGCATATA | 59.117 | 37.500 | 16.23 | 0.00 | 45.09 | 0.86 |
3300 | 7074 | 5.008316 | TGCTTCACAAAGATGCTGCATATAG | 59.992 | 40.000 | 16.23 | 11.15 | 45.09 | 1.31 |
3301 | 7075 | 5.428496 | TTCACAAAGATGCTGCATATAGC | 57.572 | 39.130 | 16.23 | 2.85 | 43.95 | 2.97 |
3303 | 7077 | 5.128205 | TCACAAAGATGCTGCATATAGCTT | 58.872 | 37.500 | 16.23 | 11.46 | 45.94 | 3.74 |
3304 | 7078 | 5.591472 | TCACAAAGATGCTGCATATAGCTTT | 59.409 | 36.000 | 16.23 | 16.51 | 45.94 | 3.51 |
3305 | 7079 | 5.685954 | CACAAAGATGCTGCATATAGCTTTG | 59.314 | 40.000 | 31.66 | 31.66 | 45.94 | 2.77 |
3306 | 7080 | 4.500603 | AAGATGCTGCATATAGCTTTGC | 57.499 | 40.909 | 16.23 | 0.00 | 45.94 | 3.68 |
3307 | 7081 | 2.483106 | AGATGCTGCATATAGCTTTGCG | 59.517 | 45.455 | 16.23 | 0.00 | 45.94 | 4.85 |
3308 | 7082 | 1.952193 | TGCTGCATATAGCTTTGCGA | 58.048 | 45.000 | 0.00 | 0.00 | 45.94 | 5.10 |
3309 | 7083 | 2.287769 | TGCTGCATATAGCTTTGCGAA | 58.712 | 42.857 | 0.00 | 0.00 | 45.94 | 4.70 |
3310 | 7084 | 2.682352 | TGCTGCATATAGCTTTGCGAAA | 59.318 | 40.909 | 0.00 | 0.00 | 45.94 | 3.46 |
3311 | 7085 | 3.128415 | TGCTGCATATAGCTTTGCGAAAA | 59.872 | 39.130 | 0.00 | 0.00 | 45.94 | 2.29 |
3312 | 7086 | 3.483558 | GCTGCATATAGCTTTGCGAAAAC | 59.516 | 43.478 | 0.00 | 0.00 | 45.94 | 2.43 |
3313 | 7087 | 3.679725 | TGCATATAGCTTTGCGAAAACG | 58.320 | 40.909 | 0.00 | 0.00 | 45.94 | 3.60 |
3314 | 7088 | 2.464016 | GCATATAGCTTTGCGAAAACGC | 59.536 | 45.455 | 7.66 | 7.66 | 41.15 | 4.84 |
3315 | 7089 | 2.817538 | TATAGCTTTGCGAAAACGCC | 57.182 | 45.000 | 11.81 | 0.00 | 0.00 | 5.68 |
3316 | 7090 | 0.179200 | ATAGCTTTGCGAAAACGCCG | 60.179 | 50.000 | 11.81 | 2.44 | 0.00 | 6.46 |
3317 | 7091 | 1.222766 | TAGCTTTGCGAAAACGCCGA | 61.223 | 50.000 | 11.81 | 0.00 | 0.00 | 5.54 |
3318 | 7092 | 1.655959 | GCTTTGCGAAAACGCCGAA | 60.656 | 52.632 | 11.81 | 6.31 | 0.00 | 4.30 |
3319 | 7093 | 1.862093 | GCTTTGCGAAAACGCCGAAC | 61.862 | 55.000 | 11.81 | 0.00 | 0.00 | 3.95 |
3337 | 7111 | 4.057428 | GGCGGACGAGCACTCTGT | 62.057 | 66.667 | 0.00 | 0.00 | 39.27 | 3.41 |
3338 | 7112 | 2.807045 | GCGGACGAGCACTCTGTG | 60.807 | 66.667 | 0.00 | 0.00 | 37.05 | 3.66 |
3339 | 7113 | 2.126307 | CGGACGAGCACTCTGTGG | 60.126 | 66.667 | 0.00 | 0.00 | 33.64 | 4.17 |
3340 | 7114 | 2.626780 | CGGACGAGCACTCTGTGGA | 61.627 | 63.158 | 0.00 | 0.00 | 33.64 | 4.02 |
3341 | 7115 | 1.080434 | GGACGAGCACTCTGTGGAC | 60.080 | 63.158 | 0.00 | 0.00 | 33.64 | 4.02 |
3342 | 7116 | 1.080434 | GACGAGCACTCTGTGGACC | 60.080 | 63.158 | 0.00 | 0.00 | 33.64 | 4.46 |
3343 | 7117 | 1.806461 | GACGAGCACTCTGTGGACCA | 61.806 | 60.000 | 0.00 | 0.00 | 33.64 | 4.02 |
3344 | 7118 | 1.188219 | ACGAGCACTCTGTGGACCAT | 61.188 | 55.000 | 0.00 | 0.00 | 33.64 | 3.55 |
3345 | 7119 | 0.738762 | CGAGCACTCTGTGGACCATG | 60.739 | 60.000 | 0.00 | 0.00 | 33.64 | 3.66 |
3346 | 7120 | 0.322975 | GAGCACTCTGTGGACCATGT | 59.677 | 55.000 | 0.00 | 0.00 | 33.64 | 3.21 |
3347 | 7121 | 0.322975 | AGCACTCTGTGGACCATGTC | 59.677 | 55.000 | 0.00 | 0.00 | 33.64 | 3.06 |
3348 | 7122 | 0.035317 | GCACTCTGTGGACCATGTCA | 59.965 | 55.000 | 0.00 | 0.00 | 33.68 | 3.58 |
3349 | 7123 | 1.943046 | GCACTCTGTGGACCATGTCAG | 60.943 | 57.143 | 0.00 | 0.21 | 33.68 | 3.51 |
3350 | 7124 | 0.322975 | ACTCTGTGGACCATGTCAGC | 59.677 | 55.000 | 0.00 | 0.00 | 33.68 | 4.26 |
3351 | 7125 | 0.738762 | CTCTGTGGACCATGTCAGCG | 60.739 | 60.000 | 0.00 | 0.00 | 33.68 | 5.18 |
3352 | 7126 | 2.358615 | TGTGGACCATGTCAGCGC | 60.359 | 61.111 | 0.00 | 0.00 | 33.68 | 5.92 |
3353 | 7127 | 3.127533 | GTGGACCATGTCAGCGCC | 61.128 | 66.667 | 2.29 | 0.00 | 33.68 | 6.53 |
3354 | 7128 | 4.758251 | TGGACCATGTCAGCGCCG | 62.758 | 66.667 | 2.29 | 0.00 | 33.68 | 6.46 |
3355 | 7129 | 4.760047 | GGACCATGTCAGCGCCGT | 62.760 | 66.667 | 2.29 | 0.00 | 33.68 | 5.68 |
3356 | 7130 | 3.188786 | GACCATGTCAGCGCCGTC | 61.189 | 66.667 | 2.29 | 0.00 | 32.09 | 4.79 |
3357 | 7131 | 4.760047 | ACCATGTCAGCGCCGTCC | 62.760 | 66.667 | 2.29 | 0.00 | 0.00 | 4.79 |
3360 | 7134 | 4.373116 | ATGTCAGCGCCGTCCGTT | 62.373 | 61.111 | 2.29 | 0.00 | 39.71 | 4.44 |
3361 | 7135 | 3.876589 | ATGTCAGCGCCGTCCGTTT | 62.877 | 57.895 | 2.29 | 0.00 | 39.71 | 3.60 |
3362 | 7136 | 3.343421 | GTCAGCGCCGTCCGTTTT | 61.343 | 61.111 | 2.29 | 0.00 | 39.71 | 2.43 |
3363 | 7137 | 3.039588 | TCAGCGCCGTCCGTTTTC | 61.040 | 61.111 | 2.29 | 0.00 | 39.71 | 2.29 |
3364 | 7138 | 3.041940 | CAGCGCCGTCCGTTTTCT | 61.042 | 61.111 | 2.29 | 0.00 | 39.71 | 2.52 |
3365 | 7139 | 1.735198 | CAGCGCCGTCCGTTTTCTA | 60.735 | 57.895 | 2.29 | 0.00 | 39.71 | 2.10 |
3366 | 7140 | 1.082117 | CAGCGCCGTCCGTTTTCTAT | 61.082 | 55.000 | 2.29 | 0.00 | 39.71 | 1.98 |
3367 | 7141 | 0.457035 | AGCGCCGTCCGTTTTCTATA | 59.543 | 50.000 | 2.29 | 0.00 | 39.71 | 1.31 |
3368 | 7142 | 1.068127 | AGCGCCGTCCGTTTTCTATAT | 59.932 | 47.619 | 2.29 | 0.00 | 39.71 | 0.86 |
3369 | 7143 | 1.862827 | GCGCCGTCCGTTTTCTATATT | 59.137 | 47.619 | 0.00 | 0.00 | 39.71 | 1.28 |
3370 | 7144 | 2.348218 | GCGCCGTCCGTTTTCTATATTG | 60.348 | 50.000 | 0.00 | 0.00 | 39.71 | 1.90 |
3371 | 7145 | 3.117794 | CGCCGTCCGTTTTCTATATTGA | 58.882 | 45.455 | 0.00 | 0.00 | 0.00 | 2.57 |
3372 | 7146 | 3.739300 | CGCCGTCCGTTTTCTATATTGAT | 59.261 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
3373 | 7147 | 4.143389 | CGCCGTCCGTTTTCTATATTGATC | 60.143 | 45.833 | 0.00 | 0.00 | 0.00 | 2.92 |
3374 | 7148 | 4.748102 | GCCGTCCGTTTTCTATATTGATCA | 59.252 | 41.667 | 0.00 | 0.00 | 0.00 | 2.92 |
3375 | 7149 | 5.107453 | GCCGTCCGTTTTCTATATTGATCAG | 60.107 | 44.000 | 0.00 | 0.00 | 0.00 | 2.90 |
3376 | 7150 | 6.213677 | CCGTCCGTTTTCTATATTGATCAGA | 58.786 | 40.000 | 0.00 | 0.00 | 0.00 | 3.27 |
3377 | 7151 | 6.868864 | CCGTCCGTTTTCTATATTGATCAGAT | 59.131 | 38.462 | 0.00 | 0.00 | 0.00 | 2.90 |
3378 | 7152 | 7.062371 | CCGTCCGTTTTCTATATTGATCAGATC | 59.938 | 40.741 | 3.11 | 3.11 | 0.00 | 2.75 |
3379 | 7153 | 7.062371 | CGTCCGTTTTCTATATTGATCAGATCC | 59.938 | 40.741 | 8.00 | 0.00 | 0.00 | 3.36 |
3380 | 7154 | 7.332182 | GTCCGTTTTCTATATTGATCAGATCCC | 59.668 | 40.741 | 8.00 | 0.00 | 0.00 | 3.85 |
3381 | 7155 | 7.235606 | TCCGTTTTCTATATTGATCAGATCCCT | 59.764 | 37.037 | 8.00 | 0.00 | 0.00 | 4.20 |
3382 | 7156 | 7.547370 | CCGTTTTCTATATTGATCAGATCCCTC | 59.453 | 40.741 | 8.00 | 0.00 | 0.00 | 4.30 |
3383 | 7157 | 7.547370 | CGTTTTCTATATTGATCAGATCCCTCC | 59.453 | 40.741 | 8.00 | 0.00 | 0.00 | 4.30 |
3384 | 7158 | 7.502060 | TTTCTATATTGATCAGATCCCTCCC | 57.498 | 40.000 | 8.00 | 0.00 | 0.00 | 4.30 |
3385 | 7159 | 5.204292 | TCTATATTGATCAGATCCCTCCCG | 58.796 | 45.833 | 8.00 | 0.00 | 0.00 | 5.14 |
3386 | 7160 | 1.356124 | ATTGATCAGATCCCTCCCGG | 58.644 | 55.000 | 8.00 | 0.00 | 0.00 | 5.73 |
3387 | 7161 | 0.031111 | TTGATCAGATCCCTCCCGGT | 60.031 | 55.000 | 8.00 | 0.00 | 0.00 | 5.28 |
3388 | 7162 | 0.857675 | TGATCAGATCCCTCCCGGTA | 59.142 | 55.000 | 8.00 | 0.00 | 0.00 | 4.02 |
3389 | 7163 | 1.433199 | TGATCAGATCCCTCCCGGTAT | 59.567 | 52.381 | 8.00 | 0.00 | 0.00 | 2.73 |
3390 | 7164 | 2.158158 | TGATCAGATCCCTCCCGGTATT | 60.158 | 50.000 | 8.00 | 0.00 | 0.00 | 1.89 |
3391 | 7165 | 2.489528 | TCAGATCCCTCCCGGTATTT | 57.510 | 50.000 | 0.00 | 0.00 | 0.00 | 1.40 |
3392 | 7166 | 3.623466 | TCAGATCCCTCCCGGTATTTA | 57.377 | 47.619 | 0.00 | 0.00 | 0.00 | 1.40 |
3393 | 7167 | 3.236896 | TCAGATCCCTCCCGGTATTTAC | 58.763 | 50.000 | 0.00 | 0.00 | 0.00 | 2.01 |
3394 | 7168 | 2.029290 | CAGATCCCTCCCGGTATTTACG | 60.029 | 54.545 | 0.00 | 0.00 | 0.00 | 3.18 |
3401 | 7175 | 3.315796 | CGGTATTTACGGGCGCTG | 58.684 | 61.111 | 7.64 | 2.40 | 0.00 | 5.18 |
3402 | 7176 | 1.519898 | CGGTATTTACGGGCGCTGT | 60.520 | 57.895 | 7.64 | 9.38 | 0.00 | 4.40 |
3403 | 7177 | 1.485032 | CGGTATTTACGGGCGCTGTC | 61.485 | 60.000 | 7.64 | 0.00 | 0.00 | 3.51 |
3404 | 7178 | 1.156034 | GGTATTTACGGGCGCTGTCC | 61.156 | 60.000 | 7.64 | 0.00 | 0.00 | 4.02 |
3405 | 7179 | 1.144496 | TATTTACGGGCGCTGTCCC | 59.856 | 57.895 | 7.64 | 0.00 | 43.02 | 4.46 |
3406 | 7180 | 2.314415 | TATTTACGGGCGCTGTCCCC | 62.314 | 60.000 | 7.64 | 0.00 | 43.56 | 4.81 |
3411 | 7185 | 4.162690 | GGGCGCTGTCCCCTGTAG | 62.163 | 72.222 | 7.64 | 0.00 | 40.51 | 2.74 |
3412 | 7186 | 3.075005 | GGCGCTGTCCCCTGTAGA | 61.075 | 66.667 | 7.64 | 0.00 | 0.00 | 2.59 |
3413 | 7187 | 2.435693 | GGCGCTGTCCCCTGTAGAT | 61.436 | 63.158 | 7.64 | 0.00 | 0.00 | 1.98 |
3414 | 7188 | 1.227380 | GCGCTGTCCCCTGTAGATG | 60.227 | 63.158 | 0.00 | 0.00 | 0.00 | 2.90 |
3415 | 7189 | 1.227380 | CGCTGTCCCCTGTAGATGC | 60.227 | 63.158 | 0.00 | 0.00 | 0.00 | 3.91 |
3416 | 7190 | 1.680522 | CGCTGTCCCCTGTAGATGCT | 61.681 | 60.000 | 0.00 | 0.00 | 0.00 | 3.79 |
3417 | 7191 | 0.105778 | GCTGTCCCCTGTAGATGCTC | 59.894 | 60.000 | 0.00 | 0.00 | 0.00 | 4.26 |
3418 | 7192 | 1.489481 | CTGTCCCCTGTAGATGCTCA | 58.511 | 55.000 | 0.00 | 0.00 | 0.00 | 4.26 |
3419 | 7193 | 1.137872 | CTGTCCCCTGTAGATGCTCAC | 59.862 | 57.143 | 0.00 | 0.00 | 0.00 | 3.51 |
3420 | 7194 | 0.466124 | GTCCCCTGTAGATGCTCACC | 59.534 | 60.000 | 0.00 | 0.00 | 0.00 | 4.02 |
3421 | 7195 | 0.691078 | TCCCCTGTAGATGCTCACCC | 60.691 | 60.000 | 0.00 | 0.00 | 0.00 | 4.61 |
3422 | 7196 | 0.982852 | CCCCTGTAGATGCTCACCCA | 60.983 | 60.000 | 0.00 | 0.00 | 0.00 | 4.51 |
3423 | 7197 | 0.179000 | CCCTGTAGATGCTCACCCAC | 59.821 | 60.000 | 0.00 | 0.00 | 0.00 | 4.61 |
3424 | 7198 | 0.179100 | CCTGTAGATGCTCACCCACG | 60.179 | 60.000 | 0.00 | 0.00 | 0.00 | 4.94 |
3425 | 7199 | 0.807667 | CTGTAGATGCTCACCCACGC | 60.808 | 60.000 | 0.00 | 0.00 | 0.00 | 5.34 |
3426 | 7200 | 1.257750 | TGTAGATGCTCACCCACGCT | 61.258 | 55.000 | 0.00 | 0.00 | 0.00 | 5.07 |
3427 | 7201 | 0.108138 | GTAGATGCTCACCCACGCTT | 60.108 | 55.000 | 0.00 | 0.00 | 0.00 | 4.68 |
3428 | 7202 | 0.108186 | TAGATGCTCACCCACGCTTG | 60.108 | 55.000 | 0.00 | 0.00 | 0.00 | 4.01 |
3429 | 7203 | 1.672356 | GATGCTCACCCACGCTTGT | 60.672 | 57.895 | 0.00 | 0.00 | 0.00 | 3.16 |
3430 | 7204 | 0.391130 | GATGCTCACCCACGCTTGTA | 60.391 | 55.000 | 0.00 | 0.00 | 0.00 | 2.41 |
3431 | 7205 | 0.253044 | ATGCTCACCCACGCTTGTAT | 59.747 | 50.000 | 0.00 | 0.00 | 0.00 | 2.29 |
3432 | 7206 | 0.391130 | TGCTCACCCACGCTTGTATC | 60.391 | 55.000 | 0.00 | 0.00 | 0.00 | 2.24 |
3433 | 7207 | 1.090052 | GCTCACCCACGCTTGTATCC | 61.090 | 60.000 | 0.00 | 0.00 | 0.00 | 2.59 |
3434 | 7208 | 0.462047 | CTCACCCACGCTTGTATCCC | 60.462 | 60.000 | 0.00 | 0.00 | 0.00 | 3.85 |
3435 | 7209 | 1.813753 | CACCCACGCTTGTATCCCG | 60.814 | 63.158 | 0.00 | 0.00 | 0.00 | 5.14 |
3436 | 7210 | 2.203015 | CCCACGCTTGTATCCCGG | 60.203 | 66.667 | 0.00 | 0.00 | 0.00 | 5.73 |
3437 | 7211 | 2.895372 | CCACGCTTGTATCCCGGC | 60.895 | 66.667 | 0.00 | 0.00 | 0.00 | 6.13 |
3438 | 7212 | 2.186903 | CACGCTTGTATCCCGGCT | 59.813 | 61.111 | 0.00 | 0.00 | 0.00 | 5.52 |
3439 | 7213 | 2.173669 | CACGCTTGTATCCCGGCTG | 61.174 | 63.158 | 0.00 | 0.00 | 0.00 | 4.85 |
3440 | 7214 | 3.272334 | CGCTTGTATCCCGGCTGC | 61.272 | 66.667 | 0.00 | 0.00 | 0.00 | 5.25 |
3441 | 7215 | 2.902343 | GCTTGTATCCCGGCTGCC | 60.902 | 66.667 | 9.11 | 9.11 | 0.00 | 4.85 |
3442 | 7216 | 2.589540 | CTTGTATCCCGGCTGCCA | 59.410 | 61.111 | 20.29 | 0.00 | 0.00 | 4.92 |
3443 | 7217 | 1.524621 | CTTGTATCCCGGCTGCCAG | 60.525 | 63.158 | 20.29 | 7.30 | 0.00 | 4.85 |
3444 | 7218 | 3.697439 | TTGTATCCCGGCTGCCAGC | 62.697 | 63.158 | 20.29 | 8.55 | 41.46 | 4.85 |
3514 | 7288 | 7.867909 | TGCTGTACAGATTATGATACTAGCAAC | 59.132 | 37.037 | 27.08 | 2.50 | 33.47 | 4.17 |
3538 | 7314 | 5.524646 | CAGTCTTTTACGGTCACTAAACCAA | 59.475 | 40.000 | 0.00 | 0.00 | 39.43 | 3.67 |
3541 | 7317 | 7.601508 | AGTCTTTTACGGTCACTAAACCAATAG | 59.398 | 37.037 | 0.00 | 0.00 | 39.43 | 1.73 |
3549 | 7325 | 6.814644 | CGGTCACTAAACCAATAGTAATCACA | 59.185 | 38.462 | 0.00 | 0.00 | 39.43 | 3.58 |
3563 | 7339 | 8.701908 | ATAGTAATCACATGCAGATGGATTTT | 57.298 | 30.769 | 9.88 | 4.25 | 34.25 | 1.82 |
3567 | 7343 | 9.754382 | GTAATCACATGCAGATGGATTTTAATT | 57.246 | 29.630 | 9.88 | 0.00 | 34.25 | 1.40 |
3589 | 7373 | 4.888038 | AGTTTATTATTCGGCCCGTTTC | 57.112 | 40.909 | 1.63 | 0.00 | 0.00 | 2.78 |
3593 | 7377 | 5.900865 | TTATTATTCGGCCCGTTTCTTTT | 57.099 | 34.783 | 1.63 | 0.00 | 0.00 | 2.27 |
3595 | 7379 | 1.324383 | ATTCGGCCCGTTTCTTTTGT | 58.676 | 45.000 | 1.63 | 0.00 | 0.00 | 2.83 |
3600 | 7384 | 3.058085 | TCGGCCCGTTTCTTTTGTAAATC | 60.058 | 43.478 | 1.63 | 0.00 | 0.00 | 2.17 |
3604 | 7388 | 4.481463 | CCCGTTTCTTTTGTAAATCGCAT | 58.519 | 39.130 | 0.00 | 0.00 | 0.00 | 4.73 |
3607 | 7391 | 6.750039 | CCCGTTTCTTTTGTAAATCGCATTAT | 59.250 | 34.615 | 0.00 | 0.00 | 0.00 | 1.28 |
3635 | 7420 | 6.524101 | AGTATTTTTACGGCCACAAATCAT | 57.476 | 33.333 | 2.24 | 0.63 | 0.00 | 2.45 |
3672 | 7461 | 1.787012 | TTTCCTTACGTCGGACTTGC | 58.213 | 50.000 | 6.57 | 0.00 | 0.00 | 4.01 |
3673 | 7462 | 0.675083 | TTCCTTACGTCGGACTTGCA | 59.325 | 50.000 | 6.57 | 0.00 | 0.00 | 4.08 |
3674 | 7463 | 0.892755 | TCCTTACGTCGGACTTGCAT | 59.107 | 50.000 | 6.57 | 0.00 | 0.00 | 3.96 |
3676 | 7465 | 1.671850 | CCTTACGTCGGACTTGCATGT | 60.672 | 52.381 | 4.68 | 4.68 | 0.00 | 3.21 |
3677 | 7466 | 1.390123 | CTTACGTCGGACTTGCATGTG | 59.610 | 52.381 | 10.37 | 0.00 | 0.00 | 3.21 |
3678 | 7467 | 0.315886 | TACGTCGGACTTGCATGTGT | 59.684 | 50.000 | 10.37 | 4.11 | 0.00 | 3.72 |
3684 | 7473 | 3.002862 | GTCGGACTTGCATGTGTTTTGTA | 59.997 | 43.478 | 10.37 | 0.00 | 0.00 | 2.41 |
3690 | 7479 | 6.478344 | GGACTTGCATGTGTTTTGTAAAATCA | 59.522 | 34.615 | 10.37 | 0.00 | 0.00 | 2.57 |
3721 | 7510 | 5.514274 | TCAAAAGTGTTTTAGCAGGAAGG | 57.486 | 39.130 | 0.00 | 0.00 | 0.00 | 3.46 |
3722 | 7511 | 4.340950 | TCAAAAGTGTTTTAGCAGGAAGGG | 59.659 | 41.667 | 0.00 | 0.00 | 0.00 | 3.95 |
3724 | 7513 | 3.876309 | AGTGTTTTAGCAGGAAGGGAA | 57.124 | 42.857 | 0.00 | 0.00 | 0.00 | 3.97 |
3725 | 7514 | 4.178956 | AGTGTTTTAGCAGGAAGGGAAA | 57.821 | 40.909 | 0.00 | 0.00 | 0.00 | 3.13 |
3726 | 7515 | 4.542697 | AGTGTTTTAGCAGGAAGGGAAAA | 58.457 | 39.130 | 0.00 | 0.00 | 0.00 | 2.29 |
3727 | 7516 | 5.147767 | AGTGTTTTAGCAGGAAGGGAAAAT | 58.852 | 37.500 | 0.00 | 0.00 | 0.00 | 1.82 |
3728 | 7517 | 6.311735 | AGTGTTTTAGCAGGAAGGGAAAATA | 58.688 | 36.000 | 0.00 | 0.00 | 0.00 | 1.40 |
3729 | 7518 | 6.434340 | AGTGTTTTAGCAGGAAGGGAAAATAG | 59.566 | 38.462 | 0.00 | 0.00 | 0.00 | 1.73 |
3730 | 7519 | 5.185056 | TGTTTTAGCAGGAAGGGAAAATAGC | 59.815 | 40.000 | 0.00 | 0.00 | 0.00 | 2.97 |
3731 | 7520 | 4.862641 | TTAGCAGGAAGGGAAAATAGCT | 57.137 | 40.909 | 0.00 | 0.00 | 35.06 | 3.32 |
3732 | 7521 | 3.746792 | AGCAGGAAGGGAAAATAGCTT | 57.253 | 42.857 | 0.00 | 0.00 | 0.00 | 3.74 |
3738 | 7527 | 7.839200 | AGCAGGAAGGGAAAATAGCTTAAATAA | 59.161 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
3762 | 7551 | 3.871485 | AGCAAATGTTTCAAAAGTGGCA | 58.129 | 36.364 | 0.00 | 0.00 | 0.00 | 4.92 |
3763 | 7552 | 3.622612 | AGCAAATGTTTCAAAAGTGGCAC | 59.377 | 39.130 | 10.29 | 10.29 | 0.00 | 5.01 |
3765 | 7554 | 4.142730 | GCAAATGTTTCAAAAGTGGCACAA | 60.143 | 37.500 | 21.41 | 1.33 | 44.16 | 3.33 |
3771 | 7560 | 5.163913 | TGTTTCAAAAGTGGCACAAAATTCG | 60.164 | 36.000 | 21.41 | 1.33 | 44.16 | 3.34 |
3809 | 7598 | 7.218204 | GGAAACAATATCAGTTTGCATAACGAC | 59.782 | 37.037 | 15.59 | 0.50 | 43.84 | 4.34 |
3864 | 7653 | 3.193267 | ACAAATCAAATGGGACCATGTCG | 59.807 | 43.478 | 4.30 | 0.00 | 36.68 | 4.35 |
3892 | 8033 | 2.156917 | CAGTTGCAGTGACACCATGAT | 58.843 | 47.619 | 0.84 | 0.00 | 0.00 | 2.45 |
3900 | 8041 | 4.022935 | GCAGTGACACCATGATTTTCTCAA | 60.023 | 41.667 | 0.84 | 0.00 | 37.44 | 3.02 |
3904 | 8045 | 5.705441 | GTGACACCATGATTTTCTCAACCTA | 59.295 | 40.000 | 0.00 | 0.00 | 37.44 | 3.08 |
3909 | 8050 | 9.308000 | ACACCATGATTTTCTCAACCTATAAAA | 57.692 | 29.630 | 0.00 | 0.00 | 37.44 | 1.52 |
3932 | 8074 | 3.832615 | AATCCGTTGGTACATACTCCC | 57.167 | 47.619 | 0.00 | 0.00 | 39.30 | 4.30 |
3933 | 8075 | 2.537633 | TCCGTTGGTACATACTCCCT | 57.462 | 50.000 | 0.00 | 0.00 | 39.30 | 4.20 |
3934 | 8076 | 2.381911 | TCCGTTGGTACATACTCCCTC | 58.618 | 52.381 | 0.00 | 0.00 | 39.30 | 4.30 |
3935 | 8077 | 1.411612 | CCGTTGGTACATACTCCCTCC | 59.588 | 57.143 | 0.00 | 0.00 | 39.30 | 4.30 |
3936 | 8078 | 1.066605 | CGTTGGTACATACTCCCTCCG | 59.933 | 57.143 | 0.00 | 0.00 | 39.30 | 4.63 |
3937 | 8079 | 2.105766 | GTTGGTACATACTCCCTCCGT | 58.894 | 52.381 | 0.00 | 0.00 | 39.30 | 4.69 |
3938 | 8080 | 2.062971 | TGGTACATACTCCCTCCGTC | 57.937 | 55.000 | 0.00 | 0.00 | 0.00 | 4.79 |
3940 | 8082 | 1.955080 | GGTACATACTCCCTCCGTCTG | 59.045 | 57.143 | 0.00 | 0.00 | 0.00 | 3.51 |
3944 | 8086 | 3.170717 | ACATACTCCCTCCGTCTGAAAA | 58.829 | 45.455 | 0.00 | 0.00 | 0.00 | 2.29 |
3945 | 8087 | 3.775316 | ACATACTCCCTCCGTCTGAAAAT | 59.225 | 43.478 | 0.00 | 0.00 | 0.00 | 1.82 |
3946 | 8088 | 4.960469 | ACATACTCCCTCCGTCTGAAAATA | 59.040 | 41.667 | 0.00 | 0.00 | 0.00 | 1.40 |
3948 | 8090 | 3.442076 | ACTCCCTCCGTCTGAAAATACT | 58.558 | 45.455 | 0.00 | 0.00 | 0.00 | 2.12 |
3949 | 8091 | 3.838903 | ACTCCCTCCGTCTGAAAATACTT | 59.161 | 43.478 | 0.00 | 0.00 | 0.00 | 2.24 |
3950 | 8092 | 4.184629 | CTCCCTCCGTCTGAAAATACTTG | 58.815 | 47.826 | 0.00 | 0.00 | 0.00 | 3.16 |
3951 | 8093 | 3.581332 | TCCCTCCGTCTGAAAATACTTGT | 59.419 | 43.478 | 0.00 | 0.00 | 0.00 | 3.16 |
3952 | 8094 | 3.933332 | CCCTCCGTCTGAAAATACTTGTC | 59.067 | 47.826 | 0.00 | 0.00 | 0.00 | 3.18 |
3953 | 8095 | 4.562757 | CCCTCCGTCTGAAAATACTTGTCA | 60.563 | 45.833 | 0.00 | 0.00 | 0.00 | 3.58 |
3954 | 8096 | 5.178797 | CCTCCGTCTGAAAATACTTGTCAT | 58.821 | 41.667 | 0.00 | 0.00 | 0.00 | 3.06 |
3955 | 8097 | 5.292101 | CCTCCGTCTGAAAATACTTGTCATC | 59.708 | 44.000 | 0.00 | 0.00 | 0.00 | 2.92 |
3956 | 8098 | 5.789521 | TCCGTCTGAAAATACTTGTCATCA | 58.210 | 37.500 | 0.00 | 0.00 | 0.00 | 3.07 |
3957 | 8099 | 6.227522 | TCCGTCTGAAAATACTTGTCATCAA | 58.772 | 36.000 | 0.00 | 0.00 | 0.00 | 2.57 |
3959 | 8101 | 7.227711 | TCCGTCTGAAAATACTTGTCATCAAAA | 59.772 | 33.333 | 0.00 | 0.00 | 32.87 | 2.44 |
4041 | 8354 | 8.972458 | TCATTTTGATGATAAGTATTTCCGGA | 57.028 | 30.769 | 0.00 | 0.00 | 0.00 | 5.14 |
4043 | 8356 | 6.838198 | TTTGATGATAAGTATTTCCGGACG | 57.162 | 37.500 | 1.83 | 0.00 | 0.00 | 4.79 |
4045 | 8358 | 4.585581 | TGATGATAAGTATTTCCGGACGGA | 59.414 | 41.667 | 1.83 | 9.76 | 43.52 | 4.69 |
4047 | 8360 | 3.319972 | TGATAAGTATTTCCGGACGGAGG | 59.680 | 47.826 | 13.64 | 0.00 | 46.06 | 4.30 |
4048 | 8361 | 0.828677 | AAGTATTTCCGGACGGAGGG | 59.171 | 55.000 | 13.64 | 0.00 | 46.06 | 4.30 |
4049 | 8362 | 0.032813 | AGTATTTCCGGACGGAGGGA | 60.033 | 55.000 | 13.64 | 4.95 | 46.06 | 4.20 |
4052 | 8365 | 1.797320 | ATTTCCGGACGGAGGGAATA | 58.203 | 50.000 | 13.64 | 0.00 | 46.06 | 1.75 |
4053 | 8366 | 1.797320 | TTTCCGGACGGAGGGAATAT | 58.203 | 50.000 | 13.64 | 0.00 | 46.06 | 1.28 |
4057 | 8543 | 1.414919 | CCGGACGGAGGGAATATTCAA | 59.585 | 52.381 | 17.07 | 0.00 | 37.50 | 2.69 |
4069 | 8555 | 6.022315 | AGGGAATATTCAACAACAAATCCCA | 58.978 | 36.000 | 17.07 | 0.00 | 45.18 | 4.37 |
4098 | 8587 | 4.724602 | GCGCTGCAGTCTCCGACA | 62.725 | 66.667 | 16.64 | 0.00 | 34.60 | 4.35 |
4100 | 8589 | 2.807045 | GCTGCAGTCTCCGACACG | 60.807 | 66.667 | 16.64 | 0.00 | 34.60 | 4.49 |
4120 | 8609 | 2.571216 | CGAATATCCCCCTCGGCGT | 61.571 | 63.158 | 6.85 | 0.00 | 0.00 | 5.68 |
4175 | 8667 | 1.303317 | CCGCAGTAAGCCCCAACTT | 60.303 | 57.895 | 0.00 | 0.00 | 41.38 | 2.66 |
4177 | 8669 | 0.321653 | CGCAGTAAGCCCCAACTTCT | 60.322 | 55.000 | 0.00 | 0.00 | 41.38 | 2.85 |
4180 | 8672 | 2.427506 | CAGTAAGCCCCAACTTCTCAC | 58.572 | 52.381 | 0.00 | 0.00 | 0.00 | 3.51 |
4213 | 8705 | 1.191489 | AAAAATTGCCACCGAGGGGG | 61.191 | 55.000 | 5.94 | 5.94 | 43.62 | 5.40 |
4238 | 8730 | 1.332686 | GGAACCACCGTTGACTTGAAC | 59.667 | 52.381 | 0.00 | 0.00 | 30.30 | 3.18 |
4239 | 8731 | 2.285977 | GAACCACCGTTGACTTGAACT | 58.714 | 47.619 | 0.00 | 0.00 | 30.30 | 3.01 |
4240 | 8732 | 1.663695 | ACCACCGTTGACTTGAACTG | 58.336 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
4241 | 8733 | 0.944386 | CCACCGTTGACTTGAACTGG | 59.056 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
4242 | 8734 | 0.944386 | CACCGTTGACTTGAACTGGG | 59.056 | 55.000 | 0.00 | 0.00 | 0.00 | 4.45 |
4243 | 8735 | 0.818040 | ACCGTTGACTTGAACTGGGC | 60.818 | 55.000 | 0.00 | 0.00 | 0.00 | 5.36 |
4251 | 8743 | 0.890996 | CTTGAACTGGGCTGGGACAC | 60.891 | 60.000 | 0.00 | 0.00 | 0.00 | 3.67 |
4269 | 8761 | 5.226396 | GGACACATGAAGATCTAATCCTCG | 58.774 | 45.833 | 0.00 | 0.00 | 0.00 | 4.63 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
45 | 46 | 8.103924 | GCTGCTTGATTTACAATTTAAATGACG | 58.896 | 33.333 | 0.39 | 0.00 | 37.88 | 4.35 |
184 | 185 | 1.126113 | CGACGGTGTCAAAGCATACAC | 59.874 | 52.381 | 0.00 | 0.00 | 44.19 | 2.90 |
200 | 201 | 4.732923 | TCTTGCAAATTTTCAGTTTCGACG | 59.267 | 37.500 | 0.00 | 0.00 | 0.00 | 5.12 |
247 | 579 | 5.523438 | TGTTGAGGTTGTAAAAATGGGAC | 57.477 | 39.130 | 0.00 | 0.00 | 0.00 | 4.46 |
270 | 622 | 8.116651 | TGTGGCTCTACTTTGCAATTTAAATA | 57.883 | 30.769 | 0.00 | 0.00 | 0.00 | 1.40 |
271 | 623 | 6.991938 | TGTGGCTCTACTTTGCAATTTAAAT | 58.008 | 32.000 | 0.00 | 0.00 | 0.00 | 1.40 |
272 | 624 | 6.398234 | TGTGGCTCTACTTTGCAATTTAAA | 57.602 | 33.333 | 0.00 | 0.00 | 0.00 | 1.52 |
277 | 629 | 3.490348 | ACTTGTGGCTCTACTTTGCAAT | 58.510 | 40.909 | 0.00 | 0.00 | 0.00 | 3.56 |
279 | 631 | 2.494059 | GACTTGTGGCTCTACTTTGCA | 58.506 | 47.619 | 0.00 | 0.00 | 0.00 | 4.08 |
280 | 632 | 1.807142 | GGACTTGTGGCTCTACTTTGC | 59.193 | 52.381 | 0.00 | 0.00 | 0.00 | 3.68 |
281 | 633 | 3.126001 | TGGACTTGTGGCTCTACTTTG | 57.874 | 47.619 | 0.00 | 0.00 | 0.00 | 2.77 |
282 | 634 | 3.857157 | TTGGACTTGTGGCTCTACTTT | 57.143 | 42.857 | 0.00 | 0.00 | 0.00 | 2.66 |
285 | 637 | 2.152016 | GGTTTGGACTTGTGGCTCTAC | 58.848 | 52.381 | 0.00 | 0.00 | 0.00 | 2.59 |
287 | 639 | 0.846693 | AGGTTTGGACTTGTGGCTCT | 59.153 | 50.000 | 0.00 | 0.00 | 0.00 | 4.09 |
289 | 641 | 2.956333 | GTTTAGGTTTGGACTTGTGGCT | 59.044 | 45.455 | 0.00 | 0.00 | 0.00 | 4.75 |
290 | 642 | 2.691011 | TGTTTAGGTTTGGACTTGTGGC | 59.309 | 45.455 | 0.00 | 0.00 | 0.00 | 5.01 |
291 | 643 | 6.834168 | ATATGTTTAGGTTTGGACTTGTGG | 57.166 | 37.500 | 0.00 | 0.00 | 0.00 | 4.17 |
292 | 644 | 7.881142 | TGAATATGTTTAGGTTTGGACTTGTG | 58.119 | 34.615 | 0.00 | 0.00 | 0.00 | 3.33 |
293 | 645 | 7.942341 | TCTGAATATGTTTAGGTTTGGACTTGT | 59.058 | 33.333 | 0.00 | 0.00 | 0.00 | 3.16 |
294 | 646 | 8.335532 | TCTGAATATGTTTAGGTTTGGACTTG | 57.664 | 34.615 | 0.00 | 0.00 | 0.00 | 3.16 |
298 | 650 | 8.792633 | CAGTTTCTGAATATGTTTAGGTTTGGA | 58.207 | 33.333 | 0.00 | 0.00 | 32.44 | 3.53 |
315 | 667 | 6.321181 | AGGCTGTAAAAATGTTCAGTTTCTGA | 59.679 | 34.615 | 0.00 | 0.00 | 38.87 | 3.27 |
316 | 668 | 6.507023 | AGGCTGTAAAAATGTTCAGTTTCTG | 58.493 | 36.000 | 0.00 | 0.00 | 0.00 | 3.02 |
317 | 669 | 6.715347 | AGGCTGTAAAAATGTTCAGTTTCT | 57.285 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
318 | 670 | 8.752254 | GTTTAGGCTGTAAAAATGTTCAGTTTC | 58.248 | 33.333 | 0.00 | 0.00 | 0.00 | 2.78 |
320 | 672 | 7.777095 | TGTTTAGGCTGTAAAAATGTTCAGTT | 58.223 | 30.769 | 0.00 | 0.00 | 0.00 | 3.16 |
325 | 677 | 7.497249 | TGCAAATGTTTAGGCTGTAAAAATGTT | 59.503 | 29.630 | 0.00 | 0.00 | 0.00 | 2.71 |
328 | 680 | 7.216494 | ACTGCAAATGTTTAGGCTGTAAAAAT | 58.784 | 30.769 | 0.00 | 0.00 | 36.80 | 1.82 |
331 | 683 | 5.782893 | ACTGCAAATGTTTAGGCTGTAAA | 57.217 | 34.783 | 0.00 | 0.00 | 36.80 | 2.01 |
334 | 686 | 4.827284 | ACTAACTGCAAATGTTTAGGCTGT | 59.173 | 37.500 | 0.00 | 0.00 | 39.61 | 4.40 |
335 | 687 | 5.156355 | CACTAACTGCAAATGTTTAGGCTG | 58.844 | 41.667 | 0.00 | 0.00 | 0.00 | 4.85 |
338 | 690 | 4.218417 | AGCCACTAACTGCAAATGTTTAGG | 59.782 | 41.667 | 0.00 | 0.00 | 0.00 | 2.69 |
340 | 692 | 4.824537 | TGAGCCACTAACTGCAAATGTTTA | 59.175 | 37.500 | 0.00 | 0.00 | 0.00 | 2.01 |
348 | 851 | 2.618241 | CAGTTTTGAGCCACTAACTGCA | 59.382 | 45.455 | 0.00 | 0.00 | 0.00 | 4.41 |
354 | 857 | 3.133901 | TGTCAGACAGTTTTGAGCCACTA | 59.866 | 43.478 | 0.00 | 0.00 | 0.00 | 2.74 |
357 | 860 | 2.708216 | TGTCAGACAGTTTTGAGCCA | 57.292 | 45.000 | 0.00 | 0.00 | 0.00 | 4.75 |
361 | 864 | 7.714813 | TGAAGTATCATTGTCAGACAGTTTTGA | 59.285 | 33.333 | 2.82 | 6.68 | 0.00 | 2.69 |
362 | 865 | 7.800380 | GTGAAGTATCATTGTCAGACAGTTTTG | 59.200 | 37.037 | 2.82 | 1.51 | 38.01 | 2.44 |
364 | 867 | 7.220030 | AGTGAAGTATCATTGTCAGACAGTTT | 58.780 | 34.615 | 2.82 | 0.00 | 38.01 | 2.66 |
365 | 868 | 6.763355 | AGTGAAGTATCATTGTCAGACAGTT | 58.237 | 36.000 | 2.82 | 0.00 | 38.01 | 3.16 |
368 | 874 | 6.758254 | TCAAGTGAAGTATCATTGTCAGACA | 58.242 | 36.000 | 0.00 | 0.00 | 38.01 | 3.41 |
370 | 876 | 7.389232 | ACATCAAGTGAAGTATCATTGTCAGA | 58.611 | 34.615 | 0.00 | 0.00 | 38.01 | 3.27 |
387 | 893 | 0.037303 | CAGGACCTGCCACATCAAGT | 59.963 | 55.000 | 8.99 | 0.00 | 40.02 | 3.16 |
389 | 895 | 0.036732 | GACAGGACCTGCCACATCAA | 59.963 | 55.000 | 21.95 | 0.00 | 40.02 | 2.57 |
391 | 897 | 1.448540 | CGACAGGACCTGCCACATC | 60.449 | 63.158 | 21.95 | 10.00 | 40.02 | 3.06 |
392 | 898 | 0.902984 | TACGACAGGACCTGCCACAT | 60.903 | 55.000 | 21.95 | 0.67 | 40.02 | 3.21 |
393 | 899 | 1.116536 | TTACGACAGGACCTGCCACA | 61.117 | 55.000 | 21.95 | 1.81 | 40.02 | 4.17 |
394 | 900 | 0.249398 | ATTACGACAGGACCTGCCAC | 59.751 | 55.000 | 21.95 | 11.95 | 40.02 | 5.01 |
398 | 904 | 2.159142 | GGTACCATTACGACAGGACCTG | 60.159 | 54.545 | 20.45 | 20.45 | 37.52 | 4.00 |
399 | 905 | 2.105766 | GGTACCATTACGACAGGACCT | 58.894 | 52.381 | 7.15 | 0.00 | 0.00 | 3.85 |
400 | 906 | 1.826720 | TGGTACCATTACGACAGGACC | 59.173 | 52.381 | 11.60 | 0.00 | 0.00 | 4.46 |
401 | 907 | 2.231964 | TGTGGTACCATTACGACAGGAC | 59.768 | 50.000 | 19.72 | 0.47 | 40.75 | 3.85 |
402 | 908 | 2.527497 | TGTGGTACCATTACGACAGGA | 58.473 | 47.619 | 19.72 | 0.00 | 40.75 | 3.86 |
403 | 909 | 3.536956 | ATGTGGTACCATTACGACAGG | 57.463 | 47.619 | 19.72 | 0.00 | 46.34 | 4.00 |
404 | 910 | 5.006358 | GCTAAATGTGGTACCATTACGACAG | 59.994 | 44.000 | 19.72 | 10.61 | 46.34 | 3.51 |
409 | 915 | 4.036380 | GCCTGCTAAATGTGGTACCATTAC | 59.964 | 45.833 | 19.72 | 5.91 | 34.01 | 1.89 |
411 | 917 | 3.023832 | GCCTGCTAAATGTGGTACCATT | 58.976 | 45.455 | 19.72 | 11.22 | 36.62 | 3.16 |
412 | 918 | 2.025416 | TGCCTGCTAAATGTGGTACCAT | 60.025 | 45.455 | 19.72 | 4.16 | 0.00 | 3.55 |
413 | 919 | 1.352687 | TGCCTGCTAAATGTGGTACCA | 59.647 | 47.619 | 11.60 | 11.60 | 0.00 | 3.25 |
417 | 923 | 2.584835 | TCTTGCCTGCTAAATGTGGT | 57.415 | 45.000 | 0.00 | 0.00 | 0.00 | 4.16 |
420 | 926 | 2.684881 | CGGAATCTTGCCTGCTAAATGT | 59.315 | 45.455 | 0.00 | 0.00 | 0.00 | 2.71 |
421 | 927 | 2.684881 | ACGGAATCTTGCCTGCTAAATG | 59.315 | 45.455 | 0.00 | 0.00 | 0.00 | 2.32 |
423 | 929 | 2.356135 | GACGGAATCTTGCCTGCTAAA | 58.644 | 47.619 | 0.00 | 0.00 | 0.00 | 1.85 |
424 | 930 | 1.739035 | CGACGGAATCTTGCCTGCTAA | 60.739 | 52.381 | 0.00 | 0.00 | 0.00 | 3.09 |
426 | 932 | 1.448540 | CGACGGAATCTTGCCTGCT | 60.449 | 57.895 | 0.00 | 0.00 | 0.00 | 4.24 |
427 | 933 | 0.811616 | ATCGACGGAATCTTGCCTGC | 60.812 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
430 | 936 | 1.212616 | CTGATCGACGGAATCTTGCC | 58.787 | 55.000 | 0.00 | 0.00 | 0.00 | 4.52 |
431 | 937 | 0.579156 | GCTGATCGACGGAATCTTGC | 59.421 | 55.000 | 0.00 | 0.00 | 0.00 | 4.01 |
432 | 938 | 0.848942 | CGCTGATCGACGGAATCTTG | 59.151 | 55.000 | 0.00 | 0.00 | 41.67 | 3.02 |
525 | 1121 | 4.803426 | GCGTCCGCACCTCCTCAG | 62.803 | 72.222 | 6.82 | 0.00 | 41.49 | 3.35 |
692 | 1309 | 0.931468 | TCAGGTCGGGGAAGATCCTA | 59.069 | 55.000 | 0.00 | 0.00 | 36.57 | 2.94 |
718 | 1335 | 0.884704 | TCTCTCAAAGCAACCCGCAC | 60.885 | 55.000 | 0.00 | 0.00 | 46.13 | 5.34 |
747 | 1364 | 2.769120 | TAGAGGAGGGGGAGCTCGG | 61.769 | 68.421 | 7.83 | 0.00 | 0.00 | 4.63 |
748 | 1365 | 1.529713 | GTAGAGGAGGGGGAGCTCG | 60.530 | 68.421 | 7.83 | 0.00 | 0.00 | 5.03 |
749 | 1366 | 1.529713 | CGTAGAGGAGGGGGAGCTC | 60.530 | 68.421 | 4.71 | 4.71 | 0.00 | 4.09 |
762 | 1379 | 1.070445 | TCTTTTTGAACGGGCCGTAGA | 59.930 | 47.619 | 34.37 | 26.10 | 39.99 | 2.59 |
819 | 1442 | 2.335712 | CGGCTTTGTTGGGCTCTCC | 61.336 | 63.158 | 0.00 | 0.00 | 0.00 | 3.71 |
924 | 1559 | 1.971695 | GGGAGGAGGTTGGCGTTTG | 60.972 | 63.158 | 0.00 | 0.00 | 0.00 | 2.93 |
1227 | 1901 | 2.989840 | CTCACCTCTTGTTCATGTCGAC | 59.010 | 50.000 | 9.11 | 9.11 | 0.00 | 4.20 |
1304 | 2396 | 2.367648 | ACACCCACCCACCACAGA | 60.368 | 61.111 | 0.00 | 0.00 | 0.00 | 3.41 |
1306 | 2398 | 4.514585 | GCACACCCACCCACCACA | 62.515 | 66.667 | 0.00 | 0.00 | 0.00 | 4.17 |
1307 | 2399 | 4.514585 | TGCACACCCACCCACCAC | 62.515 | 66.667 | 0.00 | 0.00 | 0.00 | 4.16 |
1310 | 2402 | 4.974721 | CCCTGCACACCCACCCAC | 62.975 | 72.222 | 0.00 | 0.00 | 0.00 | 4.61 |
1401 | 2500 | 0.679505 | TCCTGTTGAGGAACCAGTCG | 59.320 | 55.000 | 0.00 | 0.00 | 46.19 | 4.18 |
1546 | 2674 | 9.813080 | GAATCTTCTAACACAAAGTCATACAAC | 57.187 | 33.333 | 0.00 | 0.00 | 0.00 | 3.32 |
1547 | 2675 | 9.554395 | TGAATCTTCTAACACAAAGTCATACAA | 57.446 | 29.630 | 0.00 | 0.00 | 0.00 | 2.41 |
1548 | 2676 | 9.554395 | TTGAATCTTCTAACACAAAGTCATACA | 57.446 | 29.630 | 0.00 | 0.00 | 0.00 | 2.29 |
1564 | 2693 | 6.887013 | AGCATCATCAGTAGTTGAATCTTCT | 58.113 | 36.000 | 0.00 | 0.00 | 39.77 | 2.85 |
1565 | 2694 | 7.408123 | CAAGCATCATCAGTAGTTGAATCTTC | 58.592 | 38.462 | 0.00 | 0.00 | 39.77 | 2.87 |
1566 | 2695 | 6.183360 | GCAAGCATCATCAGTAGTTGAATCTT | 60.183 | 38.462 | 0.00 | 0.00 | 39.77 | 2.40 |
1610 | 2739 | 1.202452 | GGCAAGAAACAAACTGCTGCT | 60.202 | 47.619 | 0.00 | 0.00 | 0.00 | 4.24 |
1611 | 2740 | 1.202452 | AGGCAAGAAACAAACTGCTGC | 60.202 | 47.619 | 0.00 | 0.00 | 0.00 | 5.25 |
1612 | 2741 | 2.466846 | CAGGCAAGAAACAAACTGCTG | 58.533 | 47.619 | 0.00 | 0.00 | 0.00 | 4.41 |
1623 | 2763 | 6.192773 | ACTGTATACTACTACCAGGCAAGAA | 58.807 | 40.000 | 4.17 | 0.00 | 0.00 | 2.52 |
1803 | 3021 | 5.694006 | CCAGAGACTCTAATTTATTGCCTCG | 59.306 | 44.000 | 4.22 | 0.00 | 0.00 | 4.63 |
1804 | 3022 | 6.481644 | CACCAGAGACTCTAATTTATTGCCTC | 59.518 | 42.308 | 4.22 | 0.00 | 0.00 | 4.70 |
1972 | 3194 | 4.074970 | CTCATGGCATCCCTAATAACCAC | 58.925 | 47.826 | 0.00 | 0.00 | 0.00 | 4.16 |
1973 | 3195 | 3.074390 | CCTCATGGCATCCCTAATAACCA | 59.926 | 47.826 | 0.00 | 0.00 | 0.00 | 3.67 |
2004 | 3226 | 2.376518 | AGGCCATGAAAGAAGACCAAGA | 59.623 | 45.455 | 5.01 | 0.00 | 0.00 | 3.02 |
2067 | 3290 | 2.180131 | GAGCAGCCAGTGTCGCAAAG | 62.180 | 60.000 | 0.00 | 0.00 | 0.00 | 2.77 |
2271 | 4737 | 6.323739 | ACAAATTAGAAAGGCAGGTGAGAAAA | 59.676 | 34.615 | 0.00 | 0.00 | 0.00 | 2.29 |
2798 | 5954 | 1.226603 | CGCCCTCTAAACCGAGACG | 60.227 | 63.158 | 0.00 | 0.00 | 32.74 | 4.18 |
2799 | 5955 | 0.458025 | CACGCCCTCTAAACCGAGAC | 60.458 | 60.000 | 0.00 | 0.00 | 32.74 | 3.36 |
2800 | 5956 | 0.896940 | ACACGCCCTCTAAACCGAGA | 60.897 | 55.000 | 0.00 | 0.00 | 32.74 | 4.04 |
2801 | 5957 | 0.736325 | CACACGCCCTCTAAACCGAG | 60.736 | 60.000 | 0.00 | 0.00 | 0.00 | 4.63 |
2802 | 5958 | 1.290955 | CACACGCCCTCTAAACCGA | 59.709 | 57.895 | 0.00 | 0.00 | 0.00 | 4.69 |
2803 | 5959 | 2.388232 | GCACACGCCCTCTAAACCG | 61.388 | 63.158 | 0.00 | 0.00 | 0.00 | 4.44 |
2804 | 5960 | 2.388232 | CGCACACGCCCTCTAAACC | 61.388 | 63.158 | 0.00 | 0.00 | 33.11 | 3.27 |
2805 | 5961 | 0.388907 | TACGCACACGCCCTCTAAAC | 60.389 | 55.000 | 0.00 | 0.00 | 45.53 | 2.01 |
2806 | 5962 | 0.388907 | GTACGCACACGCCCTCTAAA | 60.389 | 55.000 | 0.00 | 0.00 | 45.53 | 1.85 |
2807 | 5963 | 1.213537 | GTACGCACACGCCCTCTAA | 59.786 | 57.895 | 0.00 | 0.00 | 45.53 | 2.10 |
2808 | 5964 | 1.246056 | AAGTACGCACACGCCCTCTA | 61.246 | 55.000 | 0.00 | 0.00 | 45.53 | 2.43 |
2812 | 5968 | 0.801067 | CTAGAAGTACGCACACGCCC | 60.801 | 60.000 | 0.00 | 0.00 | 45.53 | 6.13 |
2816 | 5972 | 3.436496 | GATGACCTAGAAGTACGCACAC | 58.564 | 50.000 | 0.00 | 0.00 | 0.00 | 3.82 |
2818 | 5974 | 2.426024 | TGGATGACCTAGAAGTACGCAC | 59.574 | 50.000 | 0.00 | 0.00 | 37.04 | 5.34 |
2833 | 5989 | 9.551734 | CTCATATTCAGTTAGTCAAATGGATGA | 57.448 | 33.333 | 0.00 | 0.00 | 30.69 | 2.92 |
2850 | 6006 | 9.040939 | CGTTTGGTGACATATAACTCATATTCA | 57.959 | 33.333 | 0.00 | 0.00 | 42.32 | 2.57 |
2851 | 6007 | 9.042008 | ACGTTTGGTGACATATAACTCATATTC | 57.958 | 33.333 | 0.00 | 0.00 | 42.32 | 1.75 |
2852 | 6008 | 8.958119 | ACGTTTGGTGACATATAACTCATATT | 57.042 | 30.769 | 0.00 | 0.00 | 42.32 | 1.28 |
2856 | 6012 | 9.687210 | GATATACGTTTGGTGACATATAACTCA | 57.313 | 33.333 | 0.00 | 0.00 | 42.32 | 3.41 |
2857 | 6013 | 9.687210 | TGATATACGTTTGGTGACATATAACTC | 57.313 | 33.333 | 0.00 | 0.00 | 42.32 | 3.01 |
2861 | 6017 | 9.430623 | CCAATGATATACGTTTGGTGACATATA | 57.569 | 33.333 | 6.32 | 0.00 | 42.32 | 0.86 |
2862 | 6018 | 8.154203 | TCCAATGATATACGTTTGGTGACATAT | 58.846 | 33.333 | 12.81 | 0.00 | 42.32 | 1.78 |
2863 | 6019 | 7.501844 | TCCAATGATATACGTTTGGTGACATA | 58.498 | 34.615 | 12.81 | 0.00 | 42.32 | 2.29 |
2864 | 6020 | 6.353323 | TCCAATGATATACGTTTGGTGACAT | 58.647 | 36.000 | 12.81 | 0.39 | 42.32 | 3.06 |
2865 | 6021 | 5.735766 | TCCAATGATATACGTTTGGTGACA | 58.264 | 37.500 | 12.81 | 0.00 | 39.83 | 3.58 |
2866 | 6022 | 6.861065 | ATCCAATGATATACGTTTGGTGAC | 57.139 | 37.500 | 12.81 | 0.00 | 0.00 | 3.67 |
2867 | 6023 | 7.279615 | AGAATCCAATGATATACGTTTGGTGA | 58.720 | 34.615 | 12.81 | 0.00 | 0.00 | 4.02 |
2868 | 6024 | 7.496529 | AGAATCCAATGATATACGTTTGGTG | 57.503 | 36.000 | 12.81 | 0.00 | 0.00 | 4.17 |
2869 | 6025 | 7.773224 | TCAAGAATCCAATGATATACGTTTGGT | 59.227 | 33.333 | 12.81 | 0.00 | 0.00 | 3.67 |
2870 | 6026 | 8.153479 | TCAAGAATCCAATGATATACGTTTGG | 57.847 | 34.615 | 7.92 | 7.92 | 0.00 | 3.28 |
2871 | 6027 | 9.438291 | GTTCAAGAATCCAATGATATACGTTTG | 57.562 | 33.333 | 0.00 | 0.00 | 0.00 | 2.93 |
2872 | 6028 | 8.335356 | CGTTCAAGAATCCAATGATATACGTTT | 58.665 | 33.333 | 0.00 | 0.00 | 0.00 | 3.60 |
2873 | 6029 | 7.042051 | CCGTTCAAGAATCCAATGATATACGTT | 60.042 | 37.037 | 0.00 | 0.00 | 0.00 | 3.99 |
2874 | 6030 | 6.423905 | CCGTTCAAGAATCCAATGATATACGT | 59.576 | 38.462 | 0.00 | 0.00 | 0.00 | 3.57 |
2875 | 6031 | 6.645003 | TCCGTTCAAGAATCCAATGATATACG | 59.355 | 38.462 | 0.00 | 0.00 | 0.00 | 3.06 |
2876 | 6032 | 7.962964 | TCCGTTCAAGAATCCAATGATATAC | 57.037 | 36.000 | 0.00 | 0.00 | 0.00 | 1.47 |
2877 | 6033 | 8.156820 | ACATCCGTTCAAGAATCCAATGATATA | 58.843 | 33.333 | 0.00 | 0.00 | 0.00 | 0.86 |
2878 | 6034 | 7.000472 | ACATCCGTTCAAGAATCCAATGATAT | 59.000 | 34.615 | 0.00 | 0.00 | 0.00 | 1.63 |
2879 | 6035 | 6.356556 | ACATCCGTTCAAGAATCCAATGATA | 58.643 | 36.000 | 0.00 | 0.00 | 0.00 | 2.15 |
2880 | 6036 | 5.195940 | ACATCCGTTCAAGAATCCAATGAT | 58.804 | 37.500 | 0.00 | 0.00 | 0.00 | 2.45 |
2881 | 6037 | 4.588899 | ACATCCGTTCAAGAATCCAATGA | 58.411 | 39.130 | 0.00 | 0.00 | 0.00 | 2.57 |
2882 | 6038 | 4.970662 | ACATCCGTTCAAGAATCCAATG | 57.029 | 40.909 | 0.00 | 0.00 | 0.00 | 2.82 |
2883 | 6039 | 5.745227 | ACTACATCCGTTCAAGAATCCAAT | 58.255 | 37.500 | 0.00 | 0.00 | 0.00 | 3.16 |
2884 | 6040 | 5.160607 | ACTACATCCGTTCAAGAATCCAA | 57.839 | 39.130 | 0.00 | 0.00 | 0.00 | 3.53 |
2885 | 6041 | 4.819105 | ACTACATCCGTTCAAGAATCCA | 57.181 | 40.909 | 0.00 | 0.00 | 0.00 | 3.41 |
2886 | 6042 | 5.875359 | AGAAACTACATCCGTTCAAGAATCC | 59.125 | 40.000 | 0.00 | 0.00 | 0.00 | 3.01 |
2887 | 6043 | 6.969828 | AGAAACTACATCCGTTCAAGAATC | 57.030 | 37.500 | 0.00 | 0.00 | 0.00 | 2.52 |
2888 | 6044 | 9.530633 | GTATAGAAACTACATCCGTTCAAGAAT | 57.469 | 33.333 | 0.00 | 0.00 | 0.00 | 2.40 |
2889 | 6045 | 8.525316 | TGTATAGAAACTACATCCGTTCAAGAA | 58.475 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
2890 | 6046 | 8.058667 | TGTATAGAAACTACATCCGTTCAAGA | 57.941 | 34.615 | 0.00 | 0.00 | 0.00 | 3.02 |
2891 | 6047 | 8.873215 | ATGTATAGAAACTACATCCGTTCAAG | 57.127 | 34.615 | 0.00 | 0.00 | 35.41 | 3.02 |
2949 | 6105 | 9.582431 | CGTCATTCTAGGTTGAGAATTTAACTA | 57.418 | 33.333 | 0.00 | 0.00 | 42.33 | 2.24 |
2956 | 6112 | 4.184629 | GCACGTCATTCTAGGTTGAGAAT | 58.815 | 43.478 | 0.00 | 0.00 | 45.17 | 2.40 |
2959 | 6115 | 2.959516 | TGCACGTCATTCTAGGTTGAG | 58.040 | 47.619 | 0.00 | 0.00 | 0.00 | 3.02 |
2961 | 6117 | 2.223112 | GCATGCACGTCATTCTAGGTTG | 60.223 | 50.000 | 14.21 | 0.00 | 31.79 | 3.77 |
2963 | 6119 | 1.656652 | GCATGCACGTCATTCTAGGT | 58.343 | 50.000 | 14.21 | 0.00 | 31.79 | 3.08 |
2964 | 6120 | 0.940126 | GGCATGCACGTCATTCTAGG | 59.060 | 55.000 | 21.36 | 0.00 | 31.79 | 3.02 |
2966 | 6122 | 0.541392 | AGGGCATGCACGTCATTCTA | 59.459 | 50.000 | 21.36 | 0.00 | 31.79 | 2.10 |
2968 | 6124 | 1.308069 | ACAGGGCATGCACGTCATTC | 61.308 | 55.000 | 21.36 | 0.00 | 31.79 | 2.67 |
2971 | 6127 | 0.250510 | TTTACAGGGCATGCACGTCA | 60.251 | 50.000 | 21.36 | 7.34 | 0.00 | 4.35 |
2972 | 6128 | 0.168128 | GTTTACAGGGCATGCACGTC | 59.832 | 55.000 | 21.36 | 5.76 | 0.00 | 4.34 |
2974 | 6130 | 1.506262 | GGTTTACAGGGCATGCACG | 59.494 | 57.895 | 21.36 | 14.83 | 0.00 | 5.34 |
2975 | 6131 | 0.958382 | TCGGTTTACAGGGCATGCAC | 60.958 | 55.000 | 21.36 | 17.78 | 0.00 | 4.57 |
2976 | 6132 | 0.958382 | GTCGGTTTACAGGGCATGCA | 60.958 | 55.000 | 21.36 | 0.00 | 0.00 | 3.96 |
2982 | 6138 | 1.338769 | CCTCCTTGTCGGTTTACAGGG | 60.339 | 57.143 | 0.00 | 0.00 | 45.51 | 4.45 |
2984 | 6140 | 1.621814 | TCCCTCCTTGTCGGTTTACAG | 59.378 | 52.381 | 0.00 | 0.00 | 0.00 | 2.74 |
2985 | 6141 | 1.621814 | CTCCCTCCTTGTCGGTTTACA | 59.378 | 52.381 | 0.00 | 0.00 | 0.00 | 2.41 |
2986 | 6142 | 1.066358 | CCTCCCTCCTTGTCGGTTTAC | 60.066 | 57.143 | 0.00 | 0.00 | 0.00 | 2.01 |
2987 | 6143 | 1.272807 | CCTCCCTCCTTGTCGGTTTA | 58.727 | 55.000 | 0.00 | 0.00 | 0.00 | 2.01 |
2989 | 6145 | 1.918800 | CCCTCCCTCCTTGTCGGTT | 60.919 | 63.158 | 0.00 | 0.00 | 0.00 | 4.44 |
2991 | 6147 | 2.038975 | TCCCTCCCTCCTTGTCGG | 59.961 | 66.667 | 0.00 | 0.00 | 0.00 | 4.79 |
2992 | 6148 | 0.033405 | TACTCCCTCCCTCCTTGTCG | 60.033 | 60.000 | 0.00 | 0.00 | 0.00 | 4.35 |
2993 | 6149 | 1.487300 | GTACTCCCTCCCTCCTTGTC | 58.513 | 60.000 | 0.00 | 0.00 | 0.00 | 3.18 |
2994 | 6150 | 0.042881 | GGTACTCCCTCCCTCCTTGT | 59.957 | 60.000 | 0.00 | 0.00 | 0.00 | 3.16 |
2995 | 6151 | 0.340208 | AGGTACTCCCTCCCTCCTTG | 59.660 | 60.000 | 0.00 | 0.00 | 40.71 | 3.61 |
2997 | 6153 | 0.340208 | CAAGGTACTCCCTCCCTCCT | 59.660 | 60.000 | 0.00 | 0.00 | 45.47 | 3.69 |
2998 | 6154 | 0.042881 | ACAAGGTACTCCCTCCCTCC | 59.957 | 60.000 | 0.00 | 0.00 | 45.47 | 4.30 |
2999 | 6155 | 2.842645 | TACAAGGTACTCCCTCCCTC | 57.157 | 55.000 | 0.00 | 0.00 | 45.47 | 4.30 |
3000 | 6156 | 2.318207 | ACATACAAGGTACTCCCTCCCT | 59.682 | 50.000 | 0.00 | 0.00 | 45.47 | 4.20 |
3001 | 6157 | 2.434702 | CACATACAAGGTACTCCCTCCC | 59.565 | 54.545 | 0.00 | 0.00 | 45.47 | 4.30 |
3002 | 6158 | 3.132467 | GTCACATACAAGGTACTCCCTCC | 59.868 | 52.174 | 0.00 | 0.00 | 45.47 | 4.30 |
3003 | 6159 | 3.132467 | GGTCACATACAAGGTACTCCCTC | 59.868 | 52.174 | 0.00 | 0.00 | 45.47 | 4.30 |
3006 | 6162 | 2.835764 | TGGGTCACATACAAGGTACTCC | 59.164 | 50.000 | 0.00 | 0.00 | 38.49 | 3.85 |
3007 | 6163 | 3.679083 | GCTGGGTCACATACAAGGTACTC | 60.679 | 52.174 | 0.00 | 0.00 | 38.49 | 2.59 |
3009 | 6165 | 2.236395 | AGCTGGGTCACATACAAGGTAC | 59.764 | 50.000 | 0.00 | 0.00 | 0.00 | 3.34 |
3070 | 6742 | 4.648762 | TGAAGTTTTCAGGAATCAGGCAAA | 59.351 | 37.500 | 0.00 | 0.00 | 34.08 | 3.68 |
3071 | 6743 | 4.037923 | GTGAAGTTTTCAGGAATCAGGCAA | 59.962 | 41.667 | 0.00 | 0.00 | 41.01 | 4.52 |
3084 | 6756 | 4.201910 | TGCTACTGCAACAGTGAAGTTTTC | 60.202 | 41.667 | 10.42 | 0.00 | 41.29 | 2.29 |
3234 | 7008 | 3.578716 | CACCAACAGTCTTTCCTCTCCTA | 59.421 | 47.826 | 0.00 | 0.00 | 0.00 | 2.94 |
3316 | 7090 | 4.719369 | AGTGCTCGTCCGCCGTTC | 62.719 | 66.667 | 0.00 | 0.00 | 37.94 | 3.95 |
3317 | 7091 | 4.719369 | GAGTGCTCGTCCGCCGTT | 62.719 | 66.667 | 0.00 | 0.00 | 37.94 | 4.44 |
3320 | 7094 | 4.057428 | ACAGAGTGCTCGTCCGCC | 62.057 | 66.667 | 0.00 | 0.00 | 34.09 | 6.13 |
3321 | 7095 | 2.807045 | CACAGAGTGCTCGTCCGC | 60.807 | 66.667 | 0.00 | 0.00 | 34.09 | 5.54 |
3322 | 7096 | 2.126307 | CCACAGAGTGCTCGTCCG | 60.126 | 66.667 | 0.00 | 0.00 | 31.34 | 4.79 |
3323 | 7097 | 1.080434 | GTCCACAGAGTGCTCGTCC | 60.080 | 63.158 | 0.00 | 0.00 | 31.34 | 4.79 |
3324 | 7098 | 1.080434 | GGTCCACAGAGTGCTCGTC | 60.080 | 63.158 | 0.00 | 0.00 | 31.34 | 4.20 |
3325 | 7099 | 1.188219 | ATGGTCCACAGAGTGCTCGT | 61.188 | 55.000 | 0.00 | 0.00 | 31.34 | 4.18 |
3326 | 7100 | 0.738762 | CATGGTCCACAGAGTGCTCG | 60.739 | 60.000 | 0.00 | 0.00 | 31.34 | 5.03 |
3327 | 7101 | 0.322975 | ACATGGTCCACAGAGTGCTC | 59.677 | 55.000 | 0.00 | 0.00 | 31.34 | 4.26 |
3328 | 7102 | 0.322975 | GACATGGTCCACAGAGTGCT | 59.677 | 55.000 | 0.00 | 0.00 | 31.34 | 4.40 |
3329 | 7103 | 0.035317 | TGACATGGTCCACAGAGTGC | 59.965 | 55.000 | 0.00 | 0.00 | 31.34 | 4.40 |
3330 | 7104 | 1.943046 | GCTGACATGGTCCACAGAGTG | 60.943 | 57.143 | 11.28 | 0.43 | 32.90 | 3.51 |
3331 | 7105 | 0.322975 | GCTGACATGGTCCACAGAGT | 59.677 | 55.000 | 11.28 | 0.65 | 32.90 | 3.24 |
3332 | 7106 | 0.738762 | CGCTGACATGGTCCACAGAG | 60.739 | 60.000 | 11.28 | 5.02 | 32.90 | 3.35 |
3333 | 7107 | 1.293179 | CGCTGACATGGTCCACAGA | 59.707 | 57.895 | 11.28 | 0.00 | 32.90 | 3.41 |
3334 | 7108 | 2.393768 | GCGCTGACATGGTCCACAG | 61.394 | 63.158 | 0.00 | 0.00 | 0.00 | 3.66 |
3335 | 7109 | 2.358615 | GCGCTGACATGGTCCACA | 60.359 | 61.111 | 0.00 | 0.00 | 0.00 | 4.17 |
3336 | 7110 | 3.127533 | GGCGCTGACATGGTCCAC | 61.128 | 66.667 | 7.64 | 0.00 | 0.00 | 4.02 |
3337 | 7111 | 4.758251 | CGGCGCTGACATGGTCCA | 62.758 | 66.667 | 11.90 | 0.00 | 0.00 | 4.02 |
3338 | 7112 | 4.760047 | ACGGCGCTGACATGGTCC | 62.760 | 66.667 | 25.98 | 0.00 | 0.00 | 4.46 |
3339 | 7113 | 3.188786 | GACGGCGCTGACATGGTC | 61.189 | 66.667 | 25.98 | 4.65 | 0.00 | 4.02 |
3340 | 7114 | 4.760047 | GGACGGCGCTGACATGGT | 62.760 | 66.667 | 25.98 | 0.00 | 0.00 | 3.55 |
3343 | 7117 | 3.876589 | AAACGGACGGCGCTGACAT | 62.877 | 57.895 | 25.98 | 6.02 | 0.00 | 3.06 |
3344 | 7118 | 4.595538 | AAACGGACGGCGCTGACA | 62.596 | 61.111 | 25.98 | 0.00 | 0.00 | 3.58 |
3345 | 7119 | 3.291167 | GAAAACGGACGGCGCTGAC | 62.291 | 63.158 | 25.98 | 17.79 | 0.00 | 3.51 |
3346 | 7120 | 2.144833 | TAGAAAACGGACGGCGCTGA | 62.145 | 55.000 | 25.98 | 0.00 | 0.00 | 4.26 |
3347 | 7121 | 1.082117 | ATAGAAAACGGACGGCGCTG | 61.082 | 55.000 | 16.39 | 16.39 | 0.00 | 5.18 |
3348 | 7122 | 0.457035 | TATAGAAAACGGACGGCGCT | 59.543 | 50.000 | 6.90 | 0.00 | 0.00 | 5.92 |
3349 | 7123 | 1.494824 | ATATAGAAAACGGACGGCGC | 58.505 | 50.000 | 6.90 | 0.00 | 0.00 | 6.53 |
3350 | 7124 | 3.117794 | TCAATATAGAAAACGGACGGCG | 58.882 | 45.455 | 4.80 | 4.80 | 0.00 | 6.46 |
3351 | 7125 | 4.748102 | TGATCAATATAGAAAACGGACGGC | 59.252 | 41.667 | 0.00 | 0.00 | 0.00 | 5.68 |
3352 | 7126 | 6.213677 | TCTGATCAATATAGAAAACGGACGG | 58.786 | 40.000 | 0.00 | 0.00 | 0.00 | 4.79 |
3353 | 7127 | 7.062371 | GGATCTGATCAATATAGAAAACGGACG | 59.938 | 40.741 | 18.64 | 0.00 | 0.00 | 4.79 |
3354 | 7128 | 7.332182 | GGGATCTGATCAATATAGAAAACGGAC | 59.668 | 40.741 | 18.64 | 0.00 | 0.00 | 4.79 |
3355 | 7129 | 7.235606 | AGGGATCTGATCAATATAGAAAACGGA | 59.764 | 37.037 | 18.64 | 0.00 | 0.00 | 4.69 |
3356 | 7130 | 7.390027 | AGGGATCTGATCAATATAGAAAACGG | 58.610 | 38.462 | 18.64 | 0.00 | 0.00 | 4.44 |
3357 | 7131 | 7.547370 | GGAGGGATCTGATCAATATAGAAAACG | 59.453 | 40.741 | 18.64 | 0.00 | 0.00 | 3.60 |
3358 | 7132 | 7.826744 | GGGAGGGATCTGATCAATATAGAAAAC | 59.173 | 40.741 | 18.64 | 0.00 | 0.00 | 2.43 |
3359 | 7133 | 7.310671 | CGGGAGGGATCTGATCAATATAGAAAA | 60.311 | 40.741 | 18.64 | 0.00 | 0.00 | 2.29 |
3360 | 7134 | 6.155221 | CGGGAGGGATCTGATCAATATAGAAA | 59.845 | 42.308 | 18.64 | 0.00 | 0.00 | 2.52 |
3361 | 7135 | 5.658634 | CGGGAGGGATCTGATCAATATAGAA | 59.341 | 44.000 | 18.64 | 0.00 | 0.00 | 2.10 |
3362 | 7136 | 5.204292 | CGGGAGGGATCTGATCAATATAGA | 58.796 | 45.833 | 18.64 | 0.00 | 0.00 | 1.98 |
3363 | 7137 | 5.528043 | CGGGAGGGATCTGATCAATATAG | 57.472 | 47.826 | 18.64 | 3.10 | 0.00 | 1.31 |
3383 | 7157 | 2.107546 | AGCGCCCGTAAATACCGG | 59.892 | 61.111 | 2.29 | 0.00 | 45.07 | 5.28 |
3384 | 7158 | 1.485032 | GACAGCGCCCGTAAATACCG | 61.485 | 60.000 | 2.29 | 0.00 | 0.00 | 4.02 |
3385 | 7159 | 1.156034 | GGACAGCGCCCGTAAATACC | 61.156 | 60.000 | 2.29 | 0.00 | 0.00 | 2.73 |
3386 | 7160 | 1.156034 | GGGACAGCGCCCGTAAATAC | 61.156 | 60.000 | 2.29 | 0.00 | 38.58 | 1.89 |
3387 | 7161 | 1.144496 | GGGACAGCGCCCGTAAATA | 59.856 | 57.895 | 2.29 | 0.00 | 38.58 | 1.40 |
3388 | 7162 | 2.124860 | GGGACAGCGCCCGTAAAT | 60.125 | 61.111 | 2.29 | 0.00 | 38.58 | 1.40 |
3395 | 7169 | 2.435693 | ATCTACAGGGGACAGCGCC | 61.436 | 63.158 | 2.29 | 0.00 | 46.91 | 6.53 |
3396 | 7170 | 1.227380 | CATCTACAGGGGACAGCGC | 60.227 | 63.158 | 0.00 | 0.00 | 0.00 | 5.92 |
3397 | 7171 | 1.227380 | GCATCTACAGGGGACAGCG | 60.227 | 63.158 | 0.00 | 0.00 | 0.00 | 5.18 |
3398 | 7172 | 0.105778 | GAGCATCTACAGGGGACAGC | 59.894 | 60.000 | 0.00 | 0.00 | 0.00 | 4.40 |
3399 | 7173 | 1.137872 | GTGAGCATCTACAGGGGACAG | 59.862 | 57.143 | 0.00 | 0.00 | 34.92 | 3.51 |
3400 | 7174 | 1.195115 | GTGAGCATCTACAGGGGACA | 58.805 | 55.000 | 0.00 | 0.00 | 34.92 | 4.02 |
3401 | 7175 | 0.466124 | GGTGAGCATCTACAGGGGAC | 59.534 | 60.000 | 0.00 | 0.00 | 34.92 | 4.46 |
3402 | 7176 | 0.691078 | GGGTGAGCATCTACAGGGGA | 60.691 | 60.000 | 0.00 | 0.00 | 34.92 | 4.81 |
3403 | 7177 | 0.982852 | TGGGTGAGCATCTACAGGGG | 60.983 | 60.000 | 0.00 | 0.00 | 34.92 | 4.79 |
3404 | 7178 | 0.179000 | GTGGGTGAGCATCTACAGGG | 59.821 | 60.000 | 0.00 | 0.00 | 34.92 | 4.45 |
3405 | 7179 | 0.179100 | CGTGGGTGAGCATCTACAGG | 60.179 | 60.000 | 0.00 | 0.00 | 34.92 | 4.00 |
3406 | 7180 | 0.807667 | GCGTGGGTGAGCATCTACAG | 60.808 | 60.000 | 0.00 | 0.00 | 34.92 | 2.74 |
3407 | 7181 | 1.218047 | GCGTGGGTGAGCATCTACA | 59.782 | 57.895 | 0.00 | 0.00 | 34.92 | 2.74 |
3408 | 7182 | 0.108138 | AAGCGTGGGTGAGCATCTAC | 60.108 | 55.000 | 0.00 | 0.00 | 34.92 | 2.59 |
3409 | 7183 | 0.108186 | CAAGCGTGGGTGAGCATCTA | 60.108 | 55.000 | 0.00 | 0.00 | 34.92 | 1.98 |
3410 | 7184 | 1.376424 | CAAGCGTGGGTGAGCATCT | 60.376 | 57.895 | 0.00 | 0.00 | 34.92 | 2.90 |
3411 | 7185 | 0.391130 | TACAAGCGTGGGTGAGCATC | 60.391 | 55.000 | 4.26 | 0.00 | 35.48 | 3.91 |
3412 | 7186 | 0.253044 | ATACAAGCGTGGGTGAGCAT | 59.747 | 50.000 | 4.26 | 0.00 | 35.48 | 3.79 |
3413 | 7187 | 0.391130 | GATACAAGCGTGGGTGAGCA | 60.391 | 55.000 | 4.26 | 0.00 | 35.48 | 4.26 |
3414 | 7188 | 1.090052 | GGATACAAGCGTGGGTGAGC | 61.090 | 60.000 | 4.26 | 0.00 | 0.00 | 4.26 |
3415 | 7189 | 0.462047 | GGGATACAAGCGTGGGTGAG | 60.462 | 60.000 | 4.26 | 0.00 | 39.74 | 3.51 |
3416 | 7190 | 1.600107 | GGGATACAAGCGTGGGTGA | 59.400 | 57.895 | 4.26 | 0.00 | 39.74 | 4.02 |
3417 | 7191 | 1.813753 | CGGGATACAAGCGTGGGTG | 60.814 | 63.158 | 4.26 | 0.00 | 39.74 | 4.61 |
3418 | 7192 | 2.582436 | CGGGATACAAGCGTGGGT | 59.418 | 61.111 | 4.26 | 0.00 | 39.74 | 4.51 |
3419 | 7193 | 2.203015 | CCGGGATACAAGCGTGGG | 60.203 | 66.667 | 4.26 | 0.00 | 39.74 | 4.61 |
3420 | 7194 | 2.895372 | GCCGGGATACAAGCGTGG | 60.895 | 66.667 | 2.18 | 0.00 | 39.74 | 4.94 |
3421 | 7195 | 2.173669 | CAGCCGGGATACAAGCGTG | 61.174 | 63.158 | 2.18 | 0.00 | 40.75 | 5.34 |
3422 | 7196 | 2.186903 | CAGCCGGGATACAAGCGT | 59.813 | 61.111 | 2.18 | 0.00 | 40.75 | 5.07 |
3423 | 7197 | 3.272334 | GCAGCCGGGATACAAGCG | 61.272 | 66.667 | 2.18 | 0.00 | 40.75 | 4.68 |
3424 | 7198 | 2.902343 | GGCAGCCGGGATACAAGC | 60.902 | 66.667 | 2.18 | 0.00 | 39.74 | 4.01 |
3425 | 7199 | 1.524621 | CTGGCAGCCGGGATACAAG | 60.525 | 63.158 | 13.23 | 0.00 | 39.74 | 3.16 |
3426 | 7200 | 2.589540 | CTGGCAGCCGGGATACAA | 59.410 | 61.111 | 13.23 | 0.00 | 39.74 | 2.41 |
3427 | 7201 | 4.175337 | GCTGGCAGCCGGGATACA | 62.175 | 66.667 | 28.87 | 0.00 | 34.48 | 2.29 |
3443 | 7217 | 1.941325 | ATGACAGGTAAAGCTAGCGC | 58.059 | 50.000 | 9.55 | 0.00 | 0.00 | 5.92 |
3444 | 7218 | 5.810587 | TCTTAAATGACAGGTAAAGCTAGCG | 59.189 | 40.000 | 9.55 | 0.00 | 0.00 | 4.26 |
3445 | 7219 | 7.119262 | TGTTCTTAAATGACAGGTAAAGCTAGC | 59.881 | 37.037 | 6.62 | 6.62 | 0.00 | 3.42 |
3446 | 7220 | 8.547967 | TGTTCTTAAATGACAGGTAAAGCTAG | 57.452 | 34.615 | 0.00 | 0.00 | 0.00 | 3.42 |
3447 | 7221 | 7.606456 | CCTGTTCTTAAATGACAGGTAAAGCTA | 59.394 | 37.037 | 17.33 | 0.00 | 42.06 | 3.32 |
3448 | 7222 | 6.431234 | CCTGTTCTTAAATGACAGGTAAAGCT | 59.569 | 38.462 | 17.33 | 0.00 | 42.06 | 3.74 |
3449 | 7223 | 6.349363 | CCCTGTTCTTAAATGACAGGTAAAGC | 60.349 | 42.308 | 21.08 | 0.00 | 44.64 | 3.51 |
3450 | 7224 | 6.349363 | GCCCTGTTCTTAAATGACAGGTAAAG | 60.349 | 42.308 | 21.08 | 12.23 | 44.64 | 1.85 |
3451 | 7225 | 5.475564 | GCCCTGTTCTTAAATGACAGGTAAA | 59.524 | 40.000 | 21.08 | 0.00 | 44.64 | 2.01 |
3452 | 7226 | 5.007682 | GCCCTGTTCTTAAATGACAGGTAA | 58.992 | 41.667 | 21.08 | 0.00 | 44.64 | 2.85 |
3453 | 7227 | 4.585879 | GCCCTGTTCTTAAATGACAGGTA | 58.414 | 43.478 | 21.08 | 0.00 | 44.64 | 3.08 |
3454 | 7228 | 3.421844 | GCCCTGTTCTTAAATGACAGGT | 58.578 | 45.455 | 21.08 | 0.00 | 44.64 | 4.00 |
3455 | 7229 | 2.420022 | CGCCCTGTTCTTAAATGACAGG | 59.580 | 50.000 | 18.12 | 18.12 | 45.43 | 4.00 |
3456 | 7230 | 3.074412 | ACGCCCTGTTCTTAAATGACAG | 58.926 | 45.455 | 5.85 | 5.85 | 0.00 | 3.51 |
3457 | 7231 | 3.134574 | ACGCCCTGTTCTTAAATGACA | 57.865 | 42.857 | 0.00 | 0.00 | 0.00 | 3.58 |
3458 | 7232 | 4.694037 | ACTAACGCCCTGTTCTTAAATGAC | 59.306 | 41.667 | 0.00 | 0.00 | 42.09 | 3.06 |
3459 | 7233 | 4.901868 | ACTAACGCCCTGTTCTTAAATGA | 58.098 | 39.130 | 0.00 | 0.00 | 42.09 | 2.57 |
3474 | 7248 | 2.153913 | CAGCACACTGGACTAACGC | 58.846 | 57.895 | 0.00 | 0.00 | 40.48 | 4.84 |
3514 | 7288 | 5.051816 | TGGTTTAGTGACCGTAAAAGACTG | 58.948 | 41.667 | 0.00 | 0.00 | 42.83 | 3.51 |
3538 | 7314 | 8.701908 | AAAATCCATCTGCATGTGATTACTAT | 57.298 | 30.769 | 0.00 | 0.00 | 32.80 | 2.12 |
3541 | 7317 | 9.754382 | AATTAAAATCCATCTGCATGTGATTAC | 57.246 | 29.630 | 0.00 | 0.00 | 32.80 | 1.89 |
3563 | 7339 | 8.449251 | AAACGGGCCGAATAATAAACTAATTA | 57.551 | 30.769 | 35.78 | 0.00 | 0.00 | 1.40 |
3567 | 7343 | 5.673514 | AGAAACGGGCCGAATAATAAACTA | 58.326 | 37.500 | 35.78 | 0.00 | 0.00 | 2.24 |
3581 | 7365 | 2.659757 | GCGATTTACAAAAGAAACGGGC | 59.340 | 45.455 | 0.00 | 0.00 | 0.00 | 6.13 |
3600 | 7384 | 7.480542 | GGCCGTAAAAATACTTATGATAATGCG | 59.519 | 37.037 | 0.00 | 0.00 | 0.00 | 4.73 |
3604 | 7388 | 8.734218 | TGTGGCCGTAAAAATACTTATGATAA | 57.266 | 30.769 | 0.00 | 0.00 | 0.00 | 1.75 |
3607 | 7391 | 7.450124 | TTTGTGGCCGTAAAAATACTTATGA | 57.550 | 32.000 | 0.00 | 0.00 | 0.00 | 2.15 |
3619 | 7404 | 3.625764 | GCTAAGATGATTTGTGGCCGTAA | 59.374 | 43.478 | 0.00 | 0.00 | 0.00 | 3.18 |
3659 | 7448 | 0.315886 | ACACATGCAAGTCCGACGTA | 59.684 | 50.000 | 0.00 | 0.00 | 0.00 | 3.57 |
3665 | 7454 | 6.478344 | TGATTTTACAAAACACATGCAAGTCC | 59.522 | 34.615 | 0.00 | 0.00 | 0.00 | 3.85 |
3669 | 7458 | 7.601073 | TTGTGATTTTACAAAACACATGCAA | 57.399 | 28.000 | 11.64 | 8.28 | 38.45 | 4.08 |
3738 | 7527 | 6.018016 | GTGCCACTTTTGAAACATTTGCTAAT | 60.018 | 34.615 | 0.00 | 0.00 | 0.00 | 1.73 |
3762 | 7551 | 1.613437 | CTGCTTGTCCCCGAATTTTGT | 59.387 | 47.619 | 0.00 | 0.00 | 0.00 | 2.83 |
3763 | 7552 | 1.067635 | CCTGCTTGTCCCCGAATTTTG | 60.068 | 52.381 | 0.00 | 0.00 | 0.00 | 2.44 |
3765 | 7554 | 0.611896 | CCCTGCTTGTCCCCGAATTT | 60.612 | 55.000 | 0.00 | 0.00 | 0.00 | 1.82 |
3771 | 7560 | 0.469144 | TTGTTTCCCTGCTTGTCCCC | 60.469 | 55.000 | 0.00 | 0.00 | 0.00 | 4.81 |
3835 | 7624 | 7.072263 | TGGTCCCATTTGATTTGTGTTTTAT | 57.928 | 32.000 | 0.00 | 0.00 | 0.00 | 1.40 |
3864 | 7653 | 1.024271 | TCACTGCAACTGTGGCTTTC | 58.976 | 50.000 | 8.88 | 0.00 | 34.75 | 2.62 |
3909 | 8050 | 4.945543 | GGGAGTATGTACCAACGGATTTTT | 59.054 | 41.667 | 0.00 | 0.00 | 0.00 | 1.94 |
3917 | 8059 | 2.100418 | GACGGAGGGAGTATGTACCAAC | 59.900 | 54.545 | 0.00 | 0.00 | 0.00 | 3.77 |
3928 | 8070 | 4.184629 | CAAGTATTTTCAGACGGAGGGAG | 58.815 | 47.826 | 0.00 | 0.00 | 0.00 | 4.30 |
3932 | 8074 | 5.869344 | TGATGACAAGTATTTTCAGACGGAG | 59.131 | 40.000 | 0.00 | 0.00 | 0.00 | 4.63 |
3933 | 8075 | 5.789521 | TGATGACAAGTATTTTCAGACGGA | 58.210 | 37.500 | 0.00 | 0.00 | 0.00 | 4.69 |
3934 | 8076 | 6.480524 | TTGATGACAAGTATTTTCAGACGG | 57.519 | 37.500 | 0.00 | 0.00 | 0.00 | 4.79 |
3935 | 8077 | 8.955061 | ATTTTGATGACAAGTATTTTCAGACG | 57.045 | 30.769 | 0.00 | 0.00 | 37.32 | 4.18 |
4019 | 8332 | 6.259167 | CCGTCCGGAAATACTTATCATCAAAA | 59.741 | 38.462 | 5.23 | 0.00 | 37.50 | 2.44 |
4022 | 8335 | 4.585581 | TCCGTCCGGAAATACTTATCATCA | 59.414 | 41.667 | 5.23 | 0.00 | 42.05 | 3.07 |
4024 | 8337 | 4.021368 | CCTCCGTCCGGAAATACTTATCAT | 60.021 | 45.833 | 5.23 | 0.00 | 44.66 | 2.45 |
4026 | 8339 | 3.305881 | CCCTCCGTCCGGAAATACTTATC | 60.306 | 52.174 | 5.23 | 0.00 | 44.66 | 1.75 |
4027 | 8340 | 2.631545 | CCCTCCGTCCGGAAATACTTAT | 59.368 | 50.000 | 5.23 | 0.00 | 44.66 | 1.73 |
4028 | 8341 | 2.034124 | CCCTCCGTCCGGAAATACTTA | 58.966 | 52.381 | 5.23 | 0.00 | 44.66 | 2.24 |
4036 | 8349 | 1.335145 | GAATATTCCCTCCGTCCGGA | 58.665 | 55.000 | 0.00 | 0.00 | 42.90 | 5.14 |
4037 | 8350 | 1.045407 | TGAATATTCCCTCCGTCCGG | 58.955 | 55.000 | 12.90 | 0.00 | 0.00 | 5.14 |
4039 | 8352 | 3.553828 | TGTTGAATATTCCCTCCGTCC | 57.446 | 47.619 | 12.90 | 0.00 | 0.00 | 4.79 |
4040 | 8353 | 4.258543 | TGTTGTTGAATATTCCCTCCGTC | 58.741 | 43.478 | 12.90 | 0.00 | 0.00 | 4.79 |
4041 | 8354 | 4.295141 | TGTTGTTGAATATTCCCTCCGT | 57.705 | 40.909 | 12.90 | 0.00 | 0.00 | 4.69 |
4043 | 8356 | 6.406961 | GGGATTTGTTGTTGAATATTCCCTCC | 60.407 | 42.308 | 12.90 | 5.52 | 0.00 | 4.30 |
4045 | 8358 | 6.022315 | TGGGATTTGTTGTTGAATATTCCCT | 58.978 | 36.000 | 12.90 | 0.00 | 33.92 | 4.20 |
4047 | 8360 | 6.696411 | TGTGGGATTTGTTGTTGAATATTCC | 58.304 | 36.000 | 12.90 | 0.00 | 0.00 | 3.01 |
4048 | 8361 | 8.658609 | CAATGTGGGATTTGTTGTTGAATATTC | 58.341 | 33.333 | 8.60 | 8.60 | 0.00 | 1.75 |
4049 | 8362 | 7.119553 | GCAATGTGGGATTTGTTGTTGAATATT | 59.880 | 33.333 | 0.00 | 0.00 | 0.00 | 1.28 |
4052 | 8365 | 4.756135 | GCAATGTGGGATTTGTTGTTGAAT | 59.244 | 37.500 | 0.00 | 0.00 | 0.00 | 2.57 |
4053 | 8366 | 4.125703 | GCAATGTGGGATTTGTTGTTGAA | 58.874 | 39.130 | 0.00 | 0.00 | 0.00 | 2.69 |
4057 | 8543 | 2.548493 | GCAGCAATGTGGGATTTGTTGT | 60.548 | 45.455 | 0.00 | 0.00 | 36.70 | 3.32 |
4120 | 8609 | 5.208890 | TGAGTCCTAGGCTTCTATTAGCAA | 58.791 | 41.667 | 2.96 | 0.00 | 43.02 | 3.91 |
4124 | 8613 | 7.536625 | ACCTATTGAGTCCTAGGCTTCTATTA | 58.463 | 38.462 | 2.96 | 0.00 | 38.47 | 0.98 |
4165 | 8657 | 2.750350 | CCGTGAGAAGTTGGGGCT | 59.250 | 61.111 | 0.00 | 0.00 | 0.00 | 5.19 |
4175 | 8667 | 0.901827 | TTGCAGGATTAGCCGTGAGA | 59.098 | 50.000 | 0.00 | 0.00 | 43.43 | 3.27 |
4177 | 8669 | 2.192664 | TTTTGCAGGATTAGCCGTGA | 57.807 | 45.000 | 0.00 | 0.00 | 43.43 | 4.35 |
4213 | 8705 | 2.842457 | AGTCAACGGTGGTTCCTAAAC | 58.158 | 47.619 | 0.00 | 0.00 | 32.98 | 2.01 |
4238 | 8730 | 0.679002 | CTTCATGTGTCCCAGCCCAG | 60.679 | 60.000 | 0.00 | 0.00 | 0.00 | 4.45 |
4239 | 8731 | 1.133181 | TCTTCATGTGTCCCAGCCCA | 61.133 | 55.000 | 0.00 | 0.00 | 0.00 | 5.36 |
4240 | 8732 | 0.257039 | ATCTTCATGTGTCCCAGCCC | 59.743 | 55.000 | 0.00 | 0.00 | 0.00 | 5.19 |
4241 | 8733 | 1.211457 | AGATCTTCATGTGTCCCAGCC | 59.789 | 52.381 | 0.00 | 0.00 | 0.00 | 4.85 |
4242 | 8734 | 2.706339 | AGATCTTCATGTGTCCCAGC | 57.294 | 50.000 | 0.00 | 0.00 | 0.00 | 4.85 |
4243 | 8735 | 5.071519 | AGGATTAGATCTTCATGTGTCCCAG | 59.928 | 44.000 | 0.00 | 0.00 | 0.00 | 4.45 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.