Multiple sequence alignment - TraesCS7B01G370500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G370500 chr7B 100.000 2420 0 0 1 2420 635942014 635939595 0.000000e+00 4470.0
1 TraesCS7B01G370500 chr7B 90.440 523 39 6 914 1428 635065020 635065539 0.000000e+00 678.0
2 TraesCS7B01G370500 chr7B 91.296 494 40 1 969 1462 635749106 635748616 0.000000e+00 671.0
3 TraesCS7B01G370500 chr7B 86.538 624 65 10 908 1520 635170607 635171222 0.000000e+00 669.0
4 TraesCS7B01G370500 chr7B 86.786 613 56 17 856 1462 636433241 636432648 0.000000e+00 660.0
5 TraesCS7B01G370500 chr7B 85.852 622 56 13 856 1462 635300960 635301564 1.220000e-177 632.0
6 TraesCS7B01G370500 chr7B 94.802 404 18 3 453 855 184247540 184247139 5.680000e-176 627.0
7 TraesCS7B01G370500 chr7B 81.223 229 25 6 227 451 636433445 636433231 4.140000e-38 169.0
8 TraesCS7B01G370500 chr7B 91.667 96 8 0 356 451 635749257 635749162 1.510000e-27 134.0
9 TraesCS7B01G370500 chr7B 93.827 81 5 0 1459 1539 635748568 635748488 3.270000e-24 122.0
10 TraesCS7B01G370500 chr7B 92.308 78 6 0 1459 1536 635301612 635301689 7.070000e-21 111.0
11 TraesCS7B01G370500 chr7B 86.869 99 10 2 356 451 635300872 635300970 9.150000e-20 108.0
12 TraesCS7B01G370500 chr7B 83.696 92 9 3 1459 1544 636432600 636432509 5.550000e-12 82.4
13 TraesCS7B01G370500 chr7D 93.146 890 53 6 1539 2420 491839009 491838120 0.000000e+00 1299.0
14 TraesCS7B01G370500 chr7D 87.288 590 53 8 856 1432 574874827 574875407 0.000000e+00 654.0
15 TraesCS7B01G370500 chr7D 88.665 547 48 5 914 1454 575218036 575217498 0.000000e+00 654.0
16 TraesCS7B01G370500 chr7D 92.593 351 19 6 1539 1882 153006735 153006385 4.650000e-137 497.0
17 TraesCS7B01G370500 chr7D 81.624 234 19 7 228 451 575149828 575149609 3.200000e-39 172.0
18 TraesCS7B01G370500 chr7D 93.750 80 5 0 356 435 575074477 575074398 1.180000e-23 121.0
19 TraesCS7B01G370500 chr7D 91.358 81 7 0 1459 1539 574924764 574924684 7.070000e-21 111.0
20 TraesCS7B01G370500 chr7D 91.892 74 6 0 1459 1532 575148973 575148900 1.180000e-18 104.0
21 TraesCS7B01G370500 chr7D 89.189 74 8 0 1459 1532 575073783 575073710 2.560000e-15 93.5
22 TraesCS7B01G370500 chr6D 91.825 893 61 2 1540 2420 471274006 471273114 0.000000e+00 1234.0
23 TraesCS7B01G370500 chr6D 92.675 314 19 4 1519 1831 386682977 386682667 1.320000e-122 449.0
24 TraesCS7B01G370500 chr2B 90.279 895 66 18 1540 2420 141719173 141718286 0.000000e+00 1151.0
25 TraesCS7B01G370500 chr2B 89.462 892 79 12 1536 2420 662891427 662892310 0.000000e+00 1112.0
26 TraesCS7B01G370500 chr2B 94.613 297 15 1 1539 1835 666639607 666639312 2.190000e-125 459.0
27 TraesCS7B01G370500 chr3B 88.474 911 70 23 1540 2420 630586654 630585749 0.000000e+00 1068.0
28 TraesCS7B01G370500 chr3B 89.937 636 61 3 1787 2420 603460704 603460070 0.000000e+00 817.0
29 TraesCS7B01G370500 chr3B 95.285 403 13 4 457 855 798589116 798589516 3.390000e-178 634.0
30 TraesCS7B01G370500 chr3B 81.624 234 27 10 3 224 796063874 796063645 1.910000e-41 180.0
31 TraesCS7B01G370500 chr2A 86.009 922 83 21 1539 2420 698099887 698098972 0.000000e+00 946.0
32 TraesCS7B01G370500 chr2A 94.604 278 14 1 1540 1817 764920542 764920818 1.720000e-116 429.0
33 TraesCS7B01G370500 chr2A 80.687 233 31 5 3 224 4068243 4068014 4.140000e-38 169.0
34 TraesCS7B01G370500 chr2A 80.519 231 32 5 4 224 105493288 105493061 5.350000e-37 165.0
35 TraesCS7B01G370500 chr2A 82.143 112 20 0 113 224 673201246 673201135 1.980000e-16 97.1
36 TraesCS7B01G370500 chr6B 87.787 827 66 15 1626 2420 84931616 84930793 0.000000e+00 935.0
37 TraesCS7B01G370500 chr6B 95.833 408 12 3 453 855 465844223 465844630 0.000000e+00 654.0
38 TraesCS7B01G370500 chr6B 94.866 409 14 6 453 855 262468419 262468826 1.220000e-177 632.0
39 TraesCS7B01G370500 chr6B 94.595 407 16 6 453 855 571741292 571740888 2.040000e-175 625.0
40 TraesCS7B01G370500 chr5A 90.762 617 49 7 1808 2420 40696576 40697188 0.000000e+00 817.0
41 TraesCS7B01G370500 chr1B 90.260 616 46 13 1815 2420 670044512 670045123 0.000000e+00 793.0
42 TraesCS7B01G370500 chr1B 81.818 132 20 4 88 218 394124642 394124770 9.150000e-20 108.0
43 TraesCS7B01G370500 chr7A 91.797 512 42 0 914 1425 664781160 664780649 0.000000e+00 713.0
44 TraesCS7B01G370500 chr7A 86.757 589 47 10 856 1430 664699291 664699862 5.680000e-176 627.0
45 TraesCS7B01G370500 chr7A 83.117 231 27 5 4 224 164794167 164794395 1.470000e-47 200.0
46 TraesCS7B01G370500 chr7A 82.328 232 29 3 3 224 676066928 676066699 8.830000e-45 191.0
47 TraesCS7B01G370500 chr7A 87.255 102 7 2 356 451 664603003 664603104 7.070000e-21 111.0
48 TraesCS7B01G370500 chr4A 96.602 412 11 3 453 861 667707423 667707012 0.000000e+00 680.0
49 TraesCS7B01G370500 chr4A 83.529 85 10 4 126 208 148757157 148757239 2.580000e-10 76.8
50 TraesCS7B01G370500 chrUn 94.866 409 14 5 452 855 31587141 31586735 1.220000e-177 632.0
51 TraesCS7B01G370500 chr5B 94.595 407 18 4 453 855 484639098 484638692 5.680000e-176 627.0
52 TraesCS7B01G370500 chr5B 93.919 296 17 1 1540 1835 571989800 571989506 1.710000e-121 446.0
53 TraesCS7B01G370500 chr5B 84.889 225 28 6 2 224 267193926 267194146 3.130000e-54 222.0
54 TraesCS7B01G370500 chr3A 94.175 412 16 5 449 854 1512991 1512582 2.640000e-174 621.0
55 TraesCS7B01G370500 chr3A 86.036 222 30 1 1 222 717291315 717291535 1.120000e-58 237.0
56 TraesCS7B01G370500 chr2D 83.111 225 35 3 1 224 26531391 26531169 4.080000e-48 202.0
57 TraesCS7B01G370500 chr5D 83.962 106 17 0 119 224 129534658 129534763 4.260000e-18 102.0
58 TraesCS7B01G370500 chr5D 76.106 226 37 12 4 224 390416278 390416065 4.260000e-18 102.0
59 TraesCS7B01G370500 chr4B 86.905 84 9 2 126 208 403625177 403625095 2.560000e-15 93.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G370500 chr7B 635939595 635942014 2419 True 4470.000000 4470 100.000000 1 2420 1 chr7B.!!$R2 2419
1 TraesCS7B01G370500 chr7B 635065020 635065539 519 False 678.000000 678 90.440000 914 1428 1 chr7B.!!$F1 514
2 TraesCS7B01G370500 chr7B 635170607 635171222 615 False 669.000000 669 86.538000 908 1520 1 chr7B.!!$F2 612
3 TraesCS7B01G370500 chr7B 635748488 635749257 769 True 309.000000 671 92.263333 356 1539 3 chr7B.!!$R3 1183
4 TraesCS7B01G370500 chr7B 636432509 636433445 936 True 303.800000 660 83.901667 227 1544 3 chr7B.!!$R4 1317
5 TraesCS7B01G370500 chr7B 635300872 635301689 817 False 283.666667 632 88.343000 356 1536 3 chr7B.!!$F3 1180
6 TraesCS7B01G370500 chr7D 491838120 491839009 889 True 1299.000000 1299 93.146000 1539 2420 1 chr7D.!!$R2 881
7 TraesCS7B01G370500 chr7D 574874827 574875407 580 False 654.000000 654 87.288000 856 1432 1 chr7D.!!$F1 576
8 TraesCS7B01G370500 chr7D 575217498 575218036 538 True 654.000000 654 88.665000 914 1454 1 chr7D.!!$R4 540
9 TraesCS7B01G370500 chr6D 471273114 471274006 892 True 1234.000000 1234 91.825000 1540 2420 1 chr6D.!!$R2 880
10 TraesCS7B01G370500 chr2B 141718286 141719173 887 True 1151.000000 1151 90.279000 1540 2420 1 chr2B.!!$R1 880
11 TraesCS7B01G370500 chr2B 662891427 662892310 883 False 1112.000000 1112 89.462000 1536 2420 1 chr2B.!!$F1 884
12 TraesCS7B01G370500 chr3B 630585749 630586654 905 True 1068.000000 1068 88.474000 1540 2420 1 chr3B.!!$R2 880
13 TraesCS7B01G370500 chr3B 603460070 603460704 634 True 817.000000 817 89.937000 1787 2420 1 chr3B.!!$R1 633
14 TraesCS7B01G370500 chr2A 698098972 698099887 915 True 946.000000 946 86.009000 1539 2420 1 chr2A.!!$R4 881
15 TraesCS7B01G370500 chr6B 84930793 84931616 823 True 935.000000 935 87.787000 1626 2420 1 chr6B.!!$R1 794
16 TraesCS7B01G370500 chr5A 40696576 40697188 612 False 817.000000 817 90.762000 1808 2420 1 chr5A.!!$F1 612
17 TraesCS7B01G370500 chr1B 670044512 670045123 611 False 793.000000 793 90.260000 1815 2420 1 chr1B.!!$F2 605
18 TraesCS7B01G370500 chr7A 664780649 664781160 511 True 713.000000 713 91.797000 914 1425 1 chr7A.!!$R1 511
19 TraesCS7B01G370500 chr7A 664699291 664699862 571 False 627.000000 627 86.757000 856 1430 1 chr7A.!!$F3 574

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
707 715 0.03759 TTGGCACGCCTTACAGGAAT 59.962 50.0 9.92 0.0 37.67 3.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2277 2477 0.386858 CACCGTATAGGCATCGTCCG 60.387 60.0 0.0 0.0 46.52 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.662781 GCCTTGTATGTAATTTAGAGATGACA 57.337 34.615 0.00 0.00 0.00 3.58
26 27 9.109393 GCCTTGTATGTAATTTAGAGATGACAA 57.891 33.333 0.00 0.00 0.00 3.18
47 48 8.739039 TGACAATAAAAGAATGTCTACAATGGG 58.261 33.333 6.68 0.00 42.99 4.00
48 49 8.650143 ACAATAAAAGAATGTCTACAATGGGT 57.350 30.769 0.00 0.00 0.00 4.51
49 50 9.747898 ACAATAAAAGAATGTCTACAATGGGTA 57.252 29.630 0.00 0.00 0.00 3.69
55 56 9.533831 AAAGAATGTCTACAATGGGTAATTTCT 57.466 29.630 0.00 0.00 0.00 2.52
56 57 9.533831 AAGAATGTCTACAATGGGTAATTTCTT 57.466 29.630 0.00 0.00 0.00 2.52
59 60 7.859325 TGTCTACAATGGGTAATTTCTTAGC 57.141 36.000 0.00 0.00 35.13 3.09
157 158 8.908786 AAGAGAAGACACACATTTTCTTATGA 57.091 30.769 0.00 0.00 30.49 2.15
158 159 8.545229 AGAGAAGACACACATTTTCTTATGAG 57.455 34.615 0.00 0.00 30.49 2.90
159 160 8.153550 AGAGAAGACACACATTTTCTTATGAGT 58.846 33.333 0.00 0.00 30.49 3.41
160 161 8.682936 AGAAGACACACATTTTCTTATGAGTT 57.317 30.769 0.00 0.00 28.71 3.01
161 162 8.778358 AGAAGACACACATTTTCTTATGAGTTC 58.222 33.333 0.00 0.00 28.71 3.01
162 163 8.682936 AAGACACACATTTTCTTATGAGTTCT 57.317 30.769 0.00 0.00 28.71 3.01
163 164 8.316640 AGACACACATTTTCTTATGAGTTCTC 57.683 34.615 0.00 0.00 28.71 2.87
164 165 8.153550 AGACACACATTTTCTTATGAGTTCTCT 58.846 33.333 1.53 0.00 28.71 3.10
165 166 8.316640 ACACACATTTTCTTATGAGTTCTCTC 57.683 34.615 1.53 0.00 40.79 3.20
166 167 8.153550 ACACACATTTTCTTATGAGTTCTCTCT 58.846 33.333 1.53 0.00 40.98 3.10
167 168 8.655092 CACACATTTTCTTATGAGTTCTCTCTC 58.345 37.037 1.53 0.00 40.98 3.20
168 169 8.592809 ACACATTTTCTTATGAGTTCTCTCTCT 58.407 33.333 1.53 0.00 40.98 3.10
169 170 9.434420 CACATTTTCTTATGAGTTCTCTCTCTT 57.566 33.333 1.53 0.00 40.98 2.85
170 171 9.651913 ACATTTTCTTATGAGTTCTCTCTCTTC 57.348 33.333 1.53 0.00 40.98 2.87
171 172 9.874205 CATTTTCTTATGAGTTCTCTCTCTTCT 57.126 33.333 1.53 0.00 40.98 2.85
173 174 9.703892 TTTTCTTATGAGTTCTCTCTCTTCTTG 57.296 33.333 1.53 0.00 40.98 3.02
174 175 6.862209 TCTTATGAGTTCTCTCTCTTCTTGC 58.138 40.000 1.53 0.00 40.98 4.01
175 176 6.663093 TCTTATGAGTTCTCTCTCTTCTTGCT 59.337 38.462 1.53 0.00 40.98 3.91
176 177 4.782019 TGAGTTCTCTCTCTTCTTGCTC 57.218 45.455 1.53 0.00 40.98 4.26
177 178 4.148079 TGAGTTCTCTCTCTTCTTGCTCA 58.852 43.478 1.53 0.00 40.98 4.26
178 179 4.771577 TGAGTTCTCTCTCTTCTTGCTCAT 59.228 41.667 1.53 0.00 40.98 2.90
179 180 5.105797 TGAGTTCTCTCTCTTCTTGCTCATC 60.106 44.000 1.53 0.00 40.98 2.92
180 181 4.771577 AGTTCTCTCTCTTCTTGCTCATCA 59.228 41.667 0.00 0.00 0.00 3.07
181 182 5.422970 AGTTCTCTCTCTTCTTGCTCATCAT 59.577 40.000 0.00 0.00 0.00 2.45
182 183 5.936187 TCTCTCTCTTCTTGCTCATCATT 57.064 39.130 0.00 0.00 0.00 2.57
183 184 6.297080 TCTCTCTCTTCTTGCTCATCATTT 57.703 37.500 0.00 0.00 0.00 2.32
184 185 7.415592 TCTCTCTCTTCTTGCTCATCATTTA 57.584 36.000 0.00 0.00 0.00 1.40
185 186 8.020777 TCTCTCTCTTCTTGCTCATCATTTAT 57.979 34.615 0.00 0.00 0.00 1.40
186 187 8.143193 TCTCTCTCTTCTTGCTCATCATTTATC 58.857 37.037 0.00 0.00 0.00 1.75
187 188 8.020777 TCTCTCTTCTTGCTCATCATTTATCT 57.979 34.615 0.00 0.00 0.00 1.98
188 189 8.484575 TCTCTCTTCTTGCTCATCATTTATCTT 58.515 33.333 0.00 0.00 0.00 2.40
189 190 9.761504 CTCTCTTCTTGCTCATCATTTATCTTA 57.238 33.333 0.00 0.00 0.00 2.10
192 193 9.842775 TCTTCTTGCTCATCATTTATCTTATGT 57.157 29.630 0.00 0.00 0.00 2.29
193 194 9.880064 CTTCTTGCTCATCATTTATCTTATGTG 57.120 33.333 0.00 0.00 0.00 3.21
194 195 8.387190 TCTTGCTCATCATTTATCTTATGTGG 57.613 34.615 0.00 0.00 0.00 4.17
195 196 6.564709 TGCTCATCATTTATCTTATGTGGC 57.435 37.500 0.00 0.00 0.00 5.01
196 197 6.063404 TGCTCATCATTTATCTTATGTGGCA 58.937 36.000 0.00 0.00 0.00 4.92
197 198 6.016860 TGCTCATCATTTATCTTATGTGGCAC 60.017 38.462 11.55 11.55 0.00 5.01
198 199 6.206243 GCTCATCATTTATCTTATGTGGCACT 59.794 38.462 19.83 6.99 0.00 4.40
199 200 7.255381 GCTCATCATTTATCTTATGTGGCACTT 60.255 37.037 19.83 15.22 0.00 3.16
200 201 8.158169 TCATCATTTATCTTATGTGGCACTTC 57.842 34.615 19.83 0.00 0.00 3.01
201 202 7.994911 TCATCATTTATCTTATGTGGCACTTCT 59.005 33.333 19.83 6.19 0.00 2.85
202 203 9.276590 CATCATTTATCTTATGTGGCACTTCTA 57.723 33.333 19.83 5.19 0.00 2.10
203 204 9.851686 ATCATTTATCTTATGTGGCACTTCTAA 57.148 29.630 19.83 12.29 0.00 2.10
204 205 9.679661 TCATTTATCTTATGTGGCACTTCTAAA 57.320 29.630 19.83 13.58 0.00 1.85
210 211 8.856153 TCTTATGTGGCACTTCTAAAATAACA 57.144 30.769 19.83 0.00 0.00 2.41
211 212 9.461312 TCTTATGTGGCACTTCTAAAATAACAT 57.539 29.630 19.83 1.46 0.00 2.71
212 213 9.722056 CTTATGTGGCACTTCTAAAATAACATC 57.278 33.333 19.83 0.00 0.00 3.06
213 214 7.701539 ATGTGGCACTTCTAAAATAACATCA 57.298 32.000 19.83 0.00 0.00 3.07
214 215 7.701539 TGTGGCACTTCTAAAATAACATCAT 57.298 32.000 19.83 0.00 0.00 2.45
215 216 8.121305 TGTGGCACTTCTAAAATAACATCATT 57.879 30.769 19.83 0.00 0.00 2.57
216 217 8.028354 TGTGGCACTTCTAAAATAACATCATTG 58.972 33.333 19.83 0.00 0.00 2.82
217 218 8.028938 GTGGCACTTCTAAAATAACATCATTGT 58.971 33.333 11.13 0.00 37.82 2.71
218 219 9.237187 TGGCACTTCTAAAATAACATCATTGTA 57.763 29.630 0.00 0.00 34.06 2.41
219 220 9.503427 GGCACTTCTAAAATAACATCATTGTAC 57.497 33.333 0.00 0.00 34.06 2.90
232 233 7.125536 ACATCATTGTACATGCTGATATTCG 57.874 36.000 12.91 6.50 33.16 3.34
248 249 1.214367 TTCGCCAAGTTTGTCTCGAC 58.786 50.000 0.00 0.00 0.00 4.20
251 252 1.597663 CGCCAAGTTTGTCTCGACTTT 59.402 47.619 0.00 0.00 34.04 2.66
253 254 2.354821 GCCAAGTTTGTCTCGACTTTGT 59.645 45.455 0.00 0.00 34.04 2.83
259 260 7.406553 CAAGTTTGTCTCGACTTTGTATGAAA 58.593 34.615 0.00 0.00 34.04 2.69
262 263 7.226720 AGTTTGTCTCGACTTTGTATGAAACAT 59.773 33.333 0.00 0.00 38.10 2.71
266 267 4.068599 TCGACTTTGTATGAAACATGGCA 58.931 39.130 0.00 0.00 38.10 4.92
270 271 6.199908 CGACTTTGTATGAAACATGGCAAAAA 59.800 34.615 0.00 0.00 38.10 1.94
286 287 6.790282 TGGCAAAAATTTAAAAAGAGGCAAC 58.210 32.000 0.00 0.00 0.00 4.17
298 299 2.670592 GGCAACTAACCCCGCGTT 60.671 61.111 4.92 0.00 38.57 4.84
299 300 2.263021 GGCAACTAACCCCGCGTTT 61.263 57.895 4.92 0.00 35.79 3.60
309 310 2.736995 CCGCGTTTCCGAAGCAGA 60.737 61.111 4.92 0.00 35.63 4.26
331 333 7.151308 CAGATGGCTAAATAAGGAGAGTACAG 58.849 42.308 0.00 0.00 0.00 2.74
343 345 1.751924 AGAGTACAGTCCATTCCGAGC 59.248 52.381 0.00 0.00 0.00 5.03
344 346 1.476891 GAGTACAGTCCATTCCGAGCA 59.523 52.381 0.00 0.00 0.00 4.26
345 347 1.899814 AGTACAGTCCATTCCGAGCAA 59.100 47.619 0.00 0.00 0.00 3.91
346 348 2.301870 AGTACAGTCCATTCCGAGCAAA 59.698 45.455 0.00 0.00 0.00 3.68
347 349 1.813513 ACAGTCCATTCCGAGCAAAG 58.186 50.000 0.00 0.00 0.00 2.77
348 350 1.347707 ACAGTCCATTCCGAGCAAAGA 59.652 47.619 0.00 0.00 0.00 2.52
349 351 2.224523 ACAGTCCATTCCGAGCAAAGAA 60.225 45.455 0.00 0.00 0.00 2.52
350 352 3.012518 CAGTCCATTCCGAGCAAAGAAT 58.987 45.455 0.00 0.00 32.95 2.40
351 353 4.191544 CAGTCCATTCCGAGCAAAGAATA 58.808 43.478 0.00 0.00 31.55 1.75
352 354 4.034510 CAGTCCATTCCGAGCAAAGAATAC 59.965 45.833 0.00 0.00 31.55 1.89
353 355 4.080863 AGTCCATTCCGAGCAAAGAATACT 60.081 41.667 0.00 0.00 31.55 2.12
354 356 4.271291 GTCCATTCCGAGCAAAGAATACTC 59.729 45.833 0.00 0.00 31.55 2.59
428 436 0.946221 CGCACAACCTCGAGCTCTTT 60.946 55.000 12.85 0.00 0.00 2.52
440 448 6.087522 CCTCGAGCTCTTTCGTTATATAAGG 58.912 44.000 12.85 8.57 41.22 2.69
441 449 6.072618 CCTCGAGCTCTTTCGTTATATAAGGA 60.073 42.308 12.85 12.68 41.22 3.36
442 450 6.900189 TCGAGCTCTTTCGTTATATAAGGAG 58.100 40.000 12.85 7.68 41.22 3.69
445 453 5.539048 GCTCTTTCGTTATATAAGGAGCCA 58.461 41.667 15.38 1.99 44.56 4.75
446 454 5.405873 GCTCTTTCGTTATATAAGGAGCCAC 59.594 44.000 15.38 5.29 44.56 5.01
447 455 5.850614 TCTTTCGTTATATAAGGAGCCACC 58.149 41.667 15.38 0.00 39.35 4.61
448 456 5.364446 TCTTTCGTTATATAAGGAGCCACCA 59.636 40.000 15.38 0.77 42.04 4.17
449 457 5.818678 TTCGTTATATAAGGAGCCACCAT 57.181 39.130 15.38 0.00 42.04 3.55
450 458 5.147330 TCGTTATATAAGGAGCCACCATG 57.853 43.478 12.68 0.00 42.04 3.66
451 459 3.684788 CGTTATATAAGGAGCCACCATGC 59.315 47.826 9.13 0.00 42.04 4.06
452 460 2.479566 ATATAAGGAGCCACCATGCG 57.520 50.000 0.47 0.00 42.04 4.73
453 461 0.396435 TATAAGGAGCCACCATGCGG 59.604 55.000 0.47 0.00 42.04 5.69
454 462 1.344953 ATAAGGAGCCACCATGCGGA 61.345 55.000 3.67 0.00 42.04 5.54
455 463 2.252072 TAAGGAGCCACCATGCGGAC 62.252 60.000 3.67 0.00 42.04 4.79
464 472 2.967076 CATGCGGACGCGGCTAAT 60.967 61.111 13.91 0.00 45.51 1.73
465 473 2.661866 ATGCGGACGCGGCTAATC 60.662 61.111 13.91 0.00 45.51 1.75
466 474 3.151958 ATGCGGACGCGGCTAATCT 62.152 57.895 13.91 0.00 45.51 2.40
467 475 3.330853 GCGGACGCGGCTAATCTG 61.331 66.667 13.91 4.81 0.00 2.90
468 476 3.330853 CGGACGCGGCTAATCTGC 61.331 66.667 13.91 0.00 43.66 4.26
473 481 3.272334 GCGGCTAATCTGCACCCG 61.272 66.667 0.00 0.00 46.35 5.28
474 482 2.499205 CGGCTAATCTGCACCCGA 59.501 61.111 0.00 0.00 41.34 5.14
475 483 1.592669 CGGCTAATCTGCACCCGAG 60.593 63.158 0.00 0.00 41.34 4.63
476 484 1.889573 GGCTAATCTGCACCCGAGC 60.890 63.158 0.00 0.00 34.04 5.03
477 485 1.144936 GCTAATCTGCACCCGAGCT 59.855 57.895 0.00 0.00 34.99 4.09
478 486 0.878086 GCTAATCTGCACCCGAGCTC 60.878 60.000 2.73 2.73 34.99 4.09
479 487 0.461548 CTAATCTGCACCCGAGCTCA 59.538 55.000 15.40 0.00 34.99 4.26
480 488 1.069823 CTAATCTGCACCCGAGCTCAT 59.930 52.381 15.40 0.00 34.99 2.90
481 489 1.123077 AATCTGCACCCGAGCTCATA 58.877 50.000 15.40 0.00 34.99 2.15
482 490 1.346062 ATCTGCACCCGAGCTCATAT 58.654 50.000 15.40 0.00 34.99 1.78
483 491 0.390492 TCTGCACCCGAGCTCATATG 59.610 55.000 15.40 9.02 34.99 1.78
484 492 1.226686 CTGCACCCGAGCTCATATGC 61.227 60.000 20.59 20.59 34.99 3.14
501 509 2.857186 TGCTCCTGCATGAACAGTAA 57.143 45.000 0.00 0.00 45.31 2.24
502 510 3.138884 TGCTCCTGCATGAACAGTAAA 57.861 42.857 0.00 0.00 45.31 2.01
503 511 3.485394 TGCTCCTGCATGAACAGTAAAA 58.515 40.909 0.00 0.00 45.31 1.52
504 512 4.081406 TGCTCCTGCATGAACAGTAAAAT 58.919 39.130 0.00 0.00 45.31 1.82
505 513 4.523943 TGCTCCTGCATGAACAGTAAAATT 59.476 37.500 0.00 0.00 45.31 1.82
506 514 4.860907 GCTCCTGCATGAACAGTAAAATTG 59.139 41.667 0.00 0.00 39.41 2.32
507 515 5.335897 GCTCCTGCATGAACAGTAAAATTGA 60.336 40.000 0.00 0.00 39.41 2.57
508 516 6.647334 TCCTGCATGAACAGTAAAATTGAA 57.353 33.333 0.00 0.00 35.83 2.69
509 517 7.048629 TCCTGCATGAACAGTAAAATTGAAA 57.951 32.000 0.00 0.00 35.83 2.69
510 518 7.495901 TCCTGCATGAACAGTAAAATTGAAAA 58.504 30.769 0.00 0.00 35.83 2.29
511 519 7.984050 TCCTGCATGAACAGTAAAATTGAAAAA 59.016 29.630 0.00 0.00 35.83 1.94
575 583 9.899226 AGAAATATTGACAAAAGTTCTAAGTGC 57.101 29.630 8.19 0.00 0.00 4.40
576 584 9.129209 GAAATATTGACAAAAGTTCTAAGTGCC 57.871 33.333 0.00 0.00 0.00 5.01
577 585 8.409358 AATATTGACAAAAGTTCTAAGTGCCT 57.591 30.769 0.00 0.00 0.00 4.75
578 586 5.499139 TTGACAAAAGTTCTAAGTGCCTG 57.501 39.130 0.00 0.00 0.00 4.85
579 587 3.315191 TGACAAAAGTTCTAAGTGCCTGC 59.685 43.478 0.00 0.00 0.00 4.85
580 588 3.287222 ACAAAAGTTCTAAGTGCCTGCA 58.713 40.909 0.00 0.00 0.00 4.41
581 589 3.699038 ACAAAAGTTCTAAGTGCCTGCAA 59.301 39.130 0.00 0.00 0.00 4.08
582 590 4.159506 ACAAAAGTTCTAAGTGCCTGCAAA 59.840 37.500 0.00 0.00 0.00 3.68
583 591 5.108517 CAAAAGTTCTAAGTGCCTGCAAAA 58.891 37.500 0.00 0.00 0.00 2.44
584 592 5.337578 AAAGTTCTAAGTGCCTGCAAAAA 57.662 34.783 0.00 0.00 0.00 1.94
585 593 5.535753 AAGTTCTAAGTGCCTGCAAAAAT 57.464 34.783 0.00 0.00 0.00 1.82
586 594 5.535753 AGTTCTAAGTGCCTGCAAAAATT 57.464 34.783 0.00 0.00 0.00 1.82
587 595 5.532557 AGTTCTAAGTGCCTGCAAAAATTC 58.467 37.500 0.00 0.00 0.00 2.17
588 596 4.159377 TCTAAGTGCCTGCAAAAATTCG 57.841 40.909 0.00 0.00 0.00 3.34
589 597 2.888834 AAGTGCCTGCAAAAATTCGT 57.111 40.000 0.00 0.00 0.00 3.85
590 598 2.422276 AGTGCCTGCAAAAATTCGTC 57.578 45.000 0.00 0.00 0.00 4.20
591 599 1.680735 AGTGCCTGCAAAAATTCGTCA 59.319 42.857 0.00 0.00 0.00 4.35
592 600 2.297033 AGTGCCTGCAAAAATTCGTCAT 59.703 40.909 0.00 0.00 0.00 3.06
593 601 2.409378 GTGCCTGCAAAAATTCGTCATG 59.591 45.455 0.00 0.00 0.00 3.07
594 602 2.295629 TGCCTGCAAAAATTCGTCATGA 59.704 40.909 0.00 0.00 0.00 3.07
595 603 3.243670 TGCCTGCAAAAATTCGTCATGAA 60.244 39.130 0.00 0.00 41.81 2.57
596 604 3.740321 GCCTGCAAAAATTCGTCATGAAA 59.260 39.130 0.00 0.00 40.71 2.69
597 605 4.389687 GCCTGCAAAAATTCGTCATGAAAT 59.610 37.500 0.00 0.00 40.71 2.17
598 606 5.445010 GCCTGCAAAAATTCGTCATGAAATC 60.445 40.000 0.00 0.00 40.71 2.17
599 607 5.634439 CCTGCAAAAATTCGTCATGAAATCA 59.366 36.000 0.00 0.00 40.71 2.57
600 608 6.400303 CCTGCAAAAATTCGTCATGAAATCAC 60.400 38.462 0.00 0.00 40.71 3.06
601 609 5.981915 TGCAAAAATTCGTCATGAAATCACA 59.018 32.000 0.00 0.00 40.71 3.58
602 610 6.645827 TGCAAAAATTCGTCATGAAATCACAT 59.354 30.769 0.00 0.00 40.71 3.21
603 611 7.171167 TGCAAAAATTCGTCATGAAATCACATT 59.829 29.630 0.00 0.00 40.71 2.71
604 612 7.685304 GCAAAAATTCGTCATGAAATCACATTC 59.315 33.333 0.00 0.00 40.71 2.67
605 613 7.816945 AAAATTCGTCATGAAATCACATTCC 57.183 32.000 0.00 0.00 40.71 3.01
606 614 6.764308 AATTCGTCATGAAATCACATTCCT 57.236 33.333 0.00 0.00 40.71 3.36
607 615 7.864108 AATTCGTCATGAAATCACATTCCTA 57.136 32.000 0.00 0.00 40.71 2.94
608 616 6.908870 TTCGTCATGAAATCACATTCCTAG 57.091 37.500 0.00 0.00 32.37 3.02
609 617 6.220726 TCGTCATGAAATCACATTCCTAGA 57.779 37.500 0.00 0.00 0.00 2.43
610 618 6.276091 TCGTCATGAAATCACATTCCTAGAG 58.724 40.000 0.00 0.00 0.00 2.43
611 619 5.464722 CGTCATGAAATCACATTCCTAGAGG 59.535 44.000 0.00 0.00 0.00 3.69
612 620 5.762218 GTCATGAAATCACATTCCTAGAGGG 59.238 44.000 0.00 0.00 35.41 4.30
613 621 4.156455 TGAAATCACATTCCTAGAGGGC 57.844 45.455 0.00 0.00 35.41 5.19
614 622 2.918712 AATCACATTCCTAGAGGGCG 57.081 50.000 0.00 0.00 35.41 6.13
615 623 1.794714 ATCACATTCCTAGAGGGCGT 58.205 50.000 0.00 0.00 35.41 5.68
616 624 0.824109 TCACATTCCTAGAGGGCGTG 59.176 55.000 0.00 1.74 35.41 5.34
617 625 0.179073 CACATTCCTAGAGGGCGTGG 60.179 60.000 0.00 0.00 35.41 4.94
618 626 1.227674 CATTCCTAGAGGGCGTGGC 60.228 63.158 0.00 0.00 35.41 5.01
619 627 1.689233 ATTCCTAGAGGGCGTGGCA 60.689 57.895 0.00 0.00 35.41 4.92
620 628 1.271840 ATTCCTAGAGGGCGTGGCAA 61.272 55.000 0.00 0.00 35.41 4.52
621 629 1.485294 TTCCTAGAGGGCGTGGCAAA 61.485 55.000 0.00 0.00 35.41 3.68
622 630 1.002624 CCTAGAGGGCGTGGCAAAA 60.003 57.895 0.00 0.00 0.00 2.44
623 631 0.608035 CCTAGAGGGCGTGGCAAAAA 60.608 55.000 0.00 0.00 0.00 1.94
657 665 9.998106 AATAGTACTCTGAAAAAGCTACTTTCA 57.002 29.630 18.13 18.13 39.79 2.69
658 666 9.998106 ATAGTACTCTGAAAAAGCTACTTTCAA 57.002 29.630 19.14 12.10 41.10 2.69
659 667 8.732746 AGTACTCTGAAAAAGCTACTTTCAAA 57.267 30.769 19.14 9.92 41.10 2.69
660 668 8.613482 AGTACTCTGAAAAAGCTACTTTCAAAC 58.387 33.333 19.14 15.25 41.10 2.93
661 669 6.487103 ACTCTGAAAAAGCTACTTTCAAACG 58.513 36.000 19.14 14.03 41.10 3.60
662 670 5.270853 TCTGAAAAAGCTACTTTCAAACGC 58.729 37.500 19.14 0.00 41.10 4.84
663 671 4.987832 TGAAAAAGCTACTTTCAAACGCA 58.012 34.783 17.31 0.00 39.28 5.24
664 672 5.587289 TGAAAAAGCTACTTTCAAACGCAT 58.413 33.333 17.31 0.00 39.28 4.73
665 673 6.039616 TGAAAAAGCTACTTTCAAACGCATT 58.960 32.000 17.31 0.00 39.28 3.56
666 674 6.533367 TGAAAAAGCTACTTTCAAACGCATTT 59.467 30.769 17.31 0.00 39.28 2.32
667 675 6.902224 AAAAGCTACTTTCAAACGCATTTT 57.098 29.167 0.00 0.00 31.99 1.82
668 676 5.888412 AAGCTACTTTCAAACGCATTTTG 57.112 34.783 0.00 2.03 45.38 2.44
677 685 4.712191 CAAACGCATTTTGAAGCAATGA 57.288 36.364 2.24 0.00 46.76 2.57
678 686 5.080642 CAAACGCATTTTGAAGCAATGAA 57.919 34.783 2.24 0.00 46.76 2.57
679 687 5.681880 CAAACGCATTTTGAAGCAATGAAT 58.318 33.333 2.24 0.00 46.76 2.57
680 688 5.927954 AACGCATTTTGAAGCAATGAATT 57.072 30.435 0.00 0.00 34.05 2.17
681 689 5.927954 ACGCATTTTGAAGCAATGAATTT 57.072 30.435 0.00 0.00 34.05 1.82
682 690 5.681880 ACGCATTTTGAAGCAATGAATTTG 58.318 33.333 0.00 0.00 34.05 2.32
683 691 5.236911 ACGCATTTTGAAGCAATGAATTTGT 59.763 32.000 0.00 0.00 37.65 2.83
684 692 6.137415 CGCATTTTGAAGCAATGAATTTGTT 58.863 32.000 0.00 0.00 37.65 2.83
685 693 6.633634 CGCATTTTGAAGCAATGAATTTGTTT 59.366 30.769 0.00 0.00 40.92 2.83
686 694 7.166142 CGCATTTTGAAGCAATGAATTTGTTTT 59.834 29.630 0.00 0.00 38.67 2.43
687 695 8.809478 GCATTTTGAAGCAATGAATTTGTTTTT 58.191 25.926 0.00 0.00 38.67 1.94
704 712 0.671251 TTTTTGGCACGCCTTACAGG 59.329 50.000 9.92 0.00 38.80 4.00
705 713 0.179015 TTTTGGCACGCCTTACAGGA 60.179 50.000 9.92 0.00 37.67 3.86
706 714 0.179015 TTTGGCACGCCTTACAGGAA 60.179 50.000 9.92 0.00 37.67 3.36
707 715 0.037590 TTGGCACGCCTTACAGGAAT 59.962 50.000 9.92 0.00 37.67 3.01
708 716 0.676466 TGGCACGCCTTACAGGAATG 60.676 55.000 9.92 0.00 37.67 2.67
709 717 0.676782 GGCACGCCTTACAGGAATGT 60.677 55.000 0.00 0.00 37.67 2.71
710 718 0.447801 GCACGCCTTACAGGAATGTG 59.552 55.000 0.00 0.46 37.67 3.21
711 719 1.943968 GCACGCCTTACAGGAATGTGA 60.944 52.381 12.03 0.00 37.67 3.58
712 720 2.632377 CACGCCTTACAGGAATGTGAT 58.368 47.619 0.00 0.00 37.67 3.06
713 721 3.009723 CACGCCTTACAGGAATGTGATT 58.990 45.455 0.00 0.00 37.67 2.57
714 722 3.440173 CACGCCTTACAGGAATGTGATTT 59.560 43.478 0.00 0.00 37.67 2.17
715 723 3.689649 ACGCCTTACAGGAATGTGATTTC 59.310 43.478 0.00 0.00 37.67 2.17
716 724 3.689161 CGCCTTACAGGAATGTGATTTCA 59.311 43.478 0.00 0.00 37.67 2.69
717 725 4.336433 CGCCTTACAGGAATGTGATTTCAT 59.664 41.667 0.00 0.00 37.67 2.57
718 726 5.585390 GCCTTACAGGAATGTGATTTCATG 58.415 41.667 0.00 0.00 41.77 3.07
719 727 5.357878 GCCTTACAGGAATGTGATTTCATGA 59.642 40.000 5.92 0.00 39.18 3.07
720 728 6.040166 GCCTTACAGGAATGTGATTTCATGAT 59.960 38.462 0.00 0.00 39.18 2.45
721 729 7.423199 CCTTACAGGAATGTGATTTCATGATG 58.577 38.462 0.00 0.00 39.18 3.07
722 730 7.283807 CCTTACAGGAATGTGATTTCATGATGA 59.716 37.037 0.00 0.00 39.18 2.92
723 731 8.578448 TTACAGGAATGTGATTTCATGATGAA 57.422 30.769 3.29 3.29 39.18 2.57
724 732 7.655521 ACAGGAATGTGATTTCATGATGAAT 57.344 32.000 8.90 0.00 39.18 2.57
725 733 8.074613 ACAGGAATGTGATTTCATGATGAATT 57.925 30.769 8.90 5.47 39.18 2.17
726 734 8.537016 ACAGGAATGTGATTTCATGATGAATTT 58.463 29.630 8.90 0.00 39.18 1.82
727 735 9.378551 CAGGAATGTGATTTCATGATGAATTTT 57.621 29.630 8.90 0.00 39.18 1.82
728 736 9.953565 AGGAATGTGATTTCATGATGAATTTTT 57.046 25.926 8.90 0.00 36.11 1.94
729 737 9.982291 GGAATGTGATTTCATGATGAATTTTTG 57.018 29.630 8.90 0.00 36.11 2.44
730 738 9.485591 GAATGTGATTTCATGATGAATTTTTGC 57.514 29.630 8.90 0.00 36.11 3.68
731 739 7.964604 TGTGATTTCATGATGAATTTTTGCA 57.035 28.000 8.90 1.87 36.11 4.08
732 740 8.024146 TGTGATTTCATGATGAATTTTTGCAG 57.976 30.769 8.90 0.00 36.11 4.41
733 741 7.118535 TGTGATTTCATGATGAATTTTTGCAGG 59.881 33.333 8.90 0.00 36.11 4.85
734 742 5.866335 TTTCATGATGAATTTTTGCAGGC 57.134 34.783 8.90 0.00 36.11 4.85
735 743 4.538746 TCATGATGAATTTTTGCAGGCA 57.461 36.364 0.00 0.00 0.00 4.75
736 744 4.247258 TCATGATGAATTTTTGCAGGCAC 58.753 39.130 0.00 0.00 0.00 5.01
737 745 4.020928 TCATGATGAATTTTTGCAGGCACT 60.021 37.500 0.00 0.00 43.88 4.40
738 746 4.339872 TGATGAATTTTTGCAGGCACTT 57.660 36.364 0.00 0.00 34.60 3.16
739 747 5.465532 TGATGAATTTTTGCAGGCACTTA 57.534 34.783 0.00 0.00 34.60 2.24
740 748 5.472148 TGATGAATTTTTGCAGGCACTTAG 58.528 37.500 0.00 0.00 34.60 2.18
741 749 5.243507 TGATGAATTTTTGCAGGCACTTAGA 59.756 36.000 0.00 0.00 34.60 2.10
742 750 5.528043 TGAATTTTTGCAGGCACTTAGAA 57.472 34.783 0.00 0.00 34.60 2.10
743 751 5.288804 TGAATTTTTGCAGGCACTTAGAAC 58.711 37.500 0.00 0.00 34.60 3.01
744 752 5.068987 TGAATTTTTGCAGGCACTTAGAACT 59.931 36.000 0.00 0.00 34.60 3.01
745 753 5.535753 ATTTTTGCAGGCACTTAGAACTT 57.464 34.783 0.00 0.00 34.60 2.66
746 754 5.337578 TTTTTGCAGGCACTTAGAACTTT 57.662 34.783 0.00 0.00 34.60 2.66
747 755 5.337578 TTTTGCAGGCACTTAGAACTTTT 57.662 34.783 0.00 0.00 34.60 2.27
748 756 3.988379 TGCAGGCACTTAGAACTTTTG 57.012 42.857 0.00 0.00 34.60 2.44
749 757 3.287222 TGCAGGCACTTAGAACTTTTGT 58.713 40.909 0.00 0.00 34.60 2.83
750 758 3.315191 TGCAGGCACTTAGAACTTTTGTC 59.685 43.478 0.00 0.00 34.60 3.18
751 759 3.315191 GCAGGCACTTAGAACTTTTGTCA 59.685 43.478 0.00 0.00 34.60 3.58
752 760 4.202010 GCAGGCACTTAGAACTTTTGTCAA 60.202 41.667 0.00 0.00 34.60 3.18
753 761 5.507985 GCAGGCACTTAGAACTTTTGTCAAT 60.508 40.000 0.00 0.00 34.60 2.57
754 762 5.916883 CAGGCACTTAGAACTTTTGTCAATG 59.083 40.000 0.00 0.00 34.60 2.82
755 763 5.594317 AGGCACTTAGAACTTTTGTCAATGT 59.406 36.000 0.00 0.00 27.25 2.71
756 764 6.096846 AGGCACTTAGAACTTTTGTCAATGTT 59.903 34.615 4.72 4.72 27.25 2.71
757 765 6.756542 GGCACTTAGAACTTTTGTCAATGTTT 59.243 34.615 6.10 0.00 31.96 2.83
758 766 7.043391 GGCACTTAGAACTTTTGTCAATGTTTC 60.043 37.037 6.10 1.04 31.96 2.78
759 767 7.702348 GCACTTAGAACTTTTGTCAATGTTTCT 59.298 33.333 6.10 6.96 31.96 2.52
760 768 9.226345 CACTTAGAACTTTTGTCAATGTTTCTC 57.774 33.333 6.42 0.00 31.96 2.87
761 769 9.178758 ACTTAGAACTTTTGTCAATGTTTCTCT 57.821 29.630 6.42 3.36 31.96 3.10
762 770 9.657121 CTTAGAACTTTTGTCAATGTTTCTCTC 57.343 33.333 6.42 0.00 31.96 3.20
763 771 7.630242 AGAACTTTTGTCAATGTTTCTCTCA 57.370 32.000 6.10 0.00 31.96 3.27
764 772 8.055279 AGAACTTTTGTCAATGTTTCTCTCAA 57.945 30.769 6.10 0.00 31.96 3.02
765 773 8.522830 AGAACTTTTGTCAATGTTTCTCTCAAA 58.477 29.630 6.10 0.00 31.96 2.69
766 774 9.139174 GAACTTTTGTCAATGTTTCTCTCAAAA 57.861 29.630 6.10 0.00 31.96 2.44
767 775 9.487790 AACTTTTGTCAATGTTTCTCTCAAAAA 57.512 25.926 0.00 0.00 34.51 1.94
821 829 6.667981 TTTTTCGATTTTACTGTTCATGCG 57.332 33.333 0.00 0.00 0.00 4.73
822 830 4.335082 TTCGATTTTACTGTTCATGCGG 57.665 40.909 0.00 0.00 0.00 5.69
823 831 2.675844 TCGATTTTACTGTTCATGCGGG 59.324 45.455 0.00 0.00 0.00 6.13
824 832 2.418628 CGATTTTACTGTTCATGCGGGT 59.581 45.455 0.00 0.00 0.00 5.28
825 833 3.727673 CGATTTTACTGTTCATGCGGGTG 60.728 47.826 0.00 0.00 0.00 4.61
826 834 0.878416 TTTACTGTTCATGCGGGTGC 59.122 50.000 0.00 0.00 43.20 5.01
836 844 3.647824 GCGGGTGCATATGAGCTC 58.352 61.111 6.82 6.82 42.15 4.09
837 845 2.313172 GCGGGTGCATATGAGCTCG 61.313 63.158 9.64 10.64 42.15 5.03
838 846 1.665916 CGGGTGCATATGAGCTCGG 60.666 63.158 9.64 0.00 34.99 4.63
839 847 1.302033 GGGTGCATATGAGCTCGGG 60.302 63.158 9.64 0.00 34.99 5.14
840 848 1.447643 GGTGCATATGAGCTCGGGT 59.552 57.895 9.64 0.00 34.99 5.28
841 849 0.882042 GGTGCATATGAGCTCGGGTG 60.882 60.000 9.64 8.35 34.99 4.61
842 850 1.227645 TGCATATGAGCTCGGGTGC 60.228 57.895 22.57 22.57 34.99 5.01
843 851 1.227645 GCATATGAGCTCGGGTGCA 60.228 57.895 23.72 2.95 34.99 4.57
844 852 1.226686 GCATATGAGCTCGGGTGCAG 61.227 60.000 23.72 7.32 34.99 4.41
845 853 0.390492 CATATGAGCTCGGGTGCAGA 59.610 55.000 9.64 0.00 34.99 4.26
846 854 1.123077 ATATGAGCTCGGGTGCAGAA 58.877 50.000 9.64 0.00 34.99 3.02
847 855 1.123077 TATGAGCTCGGGTGCAGAAT 58.877 50.000 9.64 0.00 34.99 2.40
848 856 0.254178 ATGAGCTCGGGTGCAGAATT 59.746 50.000 9.64 0.00 34.99 2.17
849 857 0.674581 TGAGCTCGGGTGCAGAATTG 60.675 55.000 9.64 0.00 34.99 2.32
850 858 0.391661 GAGCTCGGGTGCAGAATTGA 60.392 55.000 0.00 0.00 34.99 2.57
851 859 0.674895 AGCTCGGGTGCAGAATTGAC 60.675 55.000 0.00 0.00 34.99 3.18
852 860 0.674895 GCTCGGGTGCAGAATTGACT 60.675 55.000 0.00 0.00 0.00 3.41
853 861 1.813513 CTCGGGTGCAGAATTGACTT 58.186 50.000 0.00 0.00 0.00 3.01
854 862 2.154462 CTCGGGTGCAGAATTGACTTT 58.846 47.619 0.00 0.00 0.00 2.66
879 887 1.153086 CCATGGCTGCCTCAGTACC 60.153 63.158 21.03 0.00 33.43 3.34
888 896 1.019805 GCCTCAGTACCAACGCCTTC 61.020 60.000 0.00 0.00 0.00 3.46
892 900 1.000506 TCAGTACCAACGCCTTCTGTC 59.999 52.381 0.00 0.00 0.00 3.51
899 907 0.318762 AACGCCTTCTGTCCTCTCAC 59.681 55.000 0.00 0.00 0.00 3.51
900 908 1.216710 CGCCTTCTGTCCTCTCACC 59.783 63.158 0.00 0.00 0.00 4.02
901 909 1.254284 CGCCTTCTGTCCTCTCACCT 61.254 60.000 0.00 0.00 0.00 4.00
902 910 0.248843 GCCTTCTGTCCTCTCACCTG 59.751 60.000 0.00 0.00 0.00 4.00
903 911 1.930251 CCTTCTGTCCTCTCACCTGA 58.070 55.000 0.00 0.00 0.00 3.86
904 912 1.548269 CCTTCTGTCCTCTCACCTGAC 59.452 57.143 0.00 0.00 0.00 3.51
905 913 2.242926 CTTCTGTCCTCTCACCTGACA 58.757 52.381 0.00 0.00 37.45 3.58
906 914 1.621992 TCTGTCCTCTCACCTGACAC 58.378 55.000 0.00 0.00 35.34 3.67
910 918 0.780637 TCCTCTCACCTGACACCTCT 59.219 55.000 0.00 0.00 0.00 3.69
912 920 2.025793 TCCTCTCACCTGACACCTCTAG 60.026 54.545 0.00 0.00 0.00 2.43
1116 1153 1.523258 CTCCTCCATGGCAGCTTCG 60.523 63.158 6.96 0.00 35.26 3.79
1117 1154 2.515523 CCTCCATGGCAGCTTCGG 60.516 66.667 6.96 0.00 0.00 4.30
1118 1155 3.207669 CTCCATGGCAGCTTCGGC 61.208 66.667 6.96 0.00 42.17 5.54
1419 1459 0.742281 ACGACTCCGCGCTCTACTAA 60.742 55.000 5.56 0.00 39.95 2.24
1454 1496 1.615262 CTCCCCATTTCACCCTCCC 59.385 63.158 0.00 0.00 0.00 4.30
1455 1497 0.921256 CTCCCCATTTCACCCTCCCT 60.921 60.000 0.00 0.00 0.00 4.20
1472 1565 1.507141 CCTGTTCGGTGAACCAGCAC 61.507 60.000 7.18 0.00 41.35 4.40
1478 1576 1.518056 CGGTGAACCAGCACAGCAAT 61.518 55.000 0.00 0.00 40.52 3.56
1493 1591 1.005512 CAATTTGCCAGCTGCTGCA 60.006 52.632 23.86 20.69 42.74 4.41
1536 1634 3.181486 CGTGGATGCTGTACATAGTGAGT 60.181 47.826 0.00 0.00 39.84 3.41
1621 1720 6.084738 AGTTGAGGATATGACTTGCCCTATA 58.915 40.000 0.00 0.00 0.00 1.31
1624 1723 8.709308 GTTGAGGATATGACTTGCCCTATATAT 58.291 37.037 0.00 0.00 0.00 0.86
1826 1927 3.642503 CCACAACCCTACCCCGCA 61.643 66.667 0.00 0.00 0.00 5.69
1886 2078 0.611714 TCTCTCCCGCAAACCCTAAC 59.388 55.000 0.00 0.00 0.00 2.34
1928 2125 1.306997 CTGCCACCCCCTCCTTCTA 60.307 63.158 0.00 0.00 0.00 2.10
2010 2210 4.208686 CTACGGGTCCGAGCCTGC 62.209 72.222 16.90 0.00 42.83 4.85
2015 2215 3.386237 GGTCCGAGCCTGCTGAGT 61.386 66.667 0.00 0.00 0.00 3.41
2034 2234 4.776322 CCAAGCCGCCGACATCCA 62.776 66.667 0.00 0.00 0.00 3.41
2118 2318 4.522789 TGCTTGGAAAACCTACTTCAATCC 59.477 41.667 0.00 0.00 0.00 3.01
2146 2346 2.316792 CGTGAGTACAACCTTCGTGAG 58.683 52.381 0.00 0.00 0.00 3.51
2170 2370 0.953471 TGGACGGTCTCGCCAATTTG 60.953 55.000 8.23 0.00 38.75 2.32
2247 2447 2.164338 GTTCTTCCTCACCGTCTCTCT 58.836 52.381 0.00 0.00 0.00 3.10
2290 2490 1.080501 CGATGCGGACGATGCCTAT 60.081 57.895 0.00 0.00 0.00 2.57
2339 2539 4.333649 TCTTCACTGACAACAAGCTTCAAG 59.666 41.667 0.00 0.00 0.00 3.02
2368 2568 5.064962 TGTTTTCTTGCAGCAGGAATTTTTG 59.935 36.000 19.78 0.00 30.01 2.44
2383 2583 0.105246 TTTTGGGGTGCCACCAGAAT 60.105 50.000 17.22 0.00 41.02 2.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 8.739039 CCCATTGTAGACATTCTTTTATTGTCA 58.261 33.333 5.23 0.00 39.76 3.58
22 23 8.739972 ACCCATTGTAGACATTCTTTTATTGTC 58.260 33.333 0.00 0.00 38.30 3.18
23 24 8.650143 ACCCATTGTAGACATTCTTTTATTGT 57.350 30.769 0.00 0.00 0.00 2.71
29 30 9.533831 AGAAATTACCCATTGTAGACATTCTTT 57.466 29.630 0.00 0.00 0.00 2.52
30 31 9.533831 AAGAAATTACCCATTGTAGACATTCTT 57.466 29.630 0.00 0.00 31.33 2.52
33 34 8.903820 GCTAAGAAATTACCCATTGTAGACATT 58.096 33.333 0.00 0.00 0.00 2.71
34 35 7.502561 GGCTAAGAAATTACCCATTGTAGACAT 59.497 37.037 0.00 0.00 0.00 3.06
35 36 6.826741 GGCTAAGAAATTACCCATTGTAGACA 59.173 38.462 0.00 0.00 0.00 3.41
36 37 7.054751 AGGCTAAGAAATTACCCATTGTAGAC 58.945 38.462 0.00 0.00 0.00 2.59
37 38 7.208064 AGGCTAAGAAATTACCCATTGTAGA 57.792 36.000 0.00 0.00 0.00 2.59
38 39 7.881775 AAGGCTAAGAAATTACCCATTGTAG 57.118 36.000 0.00 0.00 0.00 2.74
39 40 9.930158 AATAAGGCTAAGAAATTACCCATTGTA 57.070 29.630 0.00 0.00 0.00 2.41
40 41 8.838649 AATAAGGCTAAGAAATTACCCATTGT 57.161 30.769 0.00 0.00 0.00 2.71
131 132 9.996554 TCATAAGAAAATGTGTGTCTTCTCTTA 57.003 29.630 0.00 0.00 33.70 2.10
132 133 8.908786 TCATAAGAAAATGTGTGTCTTCTCTT 57.091 30.769 0.00 0.00 33.70 2.85
133 134 8.153550 ACTCATAAGAAAATGTGTGTCTTCTCT 58.846 33.333 0.00 0.00 33.54 3.10
134 135 8.316640 ACTCATAAGAAAATGTGTGTCTTCTC 57.683 34.615 0.00 0.00 33.54 2.87
135 136 8.682936 AACTCATAAGAAAATGTGTGTCTTCT 57.317 30.769 0.00 0.00 34.67 2.85
136 137 8.778358 AGAACTCATAAGAAAATGTGTGTCTTC 58.222 33.333 0.00 0.00 34.67 2.87
137 138 8.682936 AGAACTCATAAGAAAATGTGTGTCTT 57.317 30.769 0.00 0.00 34.67 3.01
138 139 8.153550 AGAGAACTCATAAGAAAATGTGTGTCT 58.846 33.333 4.64 0.00 34.67 3.41
139 140 8.316640 AGAGAACTCATAAGAAAATGTGTGTC 57.683 34.615 4.64 0.00 34.67 3.67
140 141 8.153550 AGAGAGAACTCATAAGAAAATGTGTGT 58.846 33.333 4.64 0.00 44.79 3.72
141 142 8.545229 AGAGAGAACTCATAAGAAAATGTGTG 57.455 34.615 4.64 0.00 44.79 3.82
142 143 8.592809 AGAGAGAGAACTCATAAGAAAATGTGT 58.407 33.333 4.64 0.00 44.79 3.72
143 144 9.434420 AAGAGAGAGAACTCATAAGAAAATGTG 57.566 33.333 4.64 0.00 44.79 3.21
144 145 9.651913 GAAGAGAGAGAACTCATAAGAAAATGT 57.348 33.333 4.64 0.00 44.79 2.71
145 146 9.874205 AGAAGAGAGAGAACTCATAAGAAAATG 57.126 33.333 4.64 0.00 44.79 2.32
147 148 9.703892 CAAGAAGAGAGAGAACTCATAAGAAAA 57.296 33.333 4.64 0.00 44.79 2.29
148 149 7.816995 GCAAGAAGAGAGAGAACTCATAAGAAA 59.183 37.037 4.64 0.00 44.79 2.52
149 150 7.178274 AGCAAGAAGAGAGAGAACTCATAAGAA 59.822 37.037 4.64 0.00 44.79 2.52
150 151 6.663093 AGCAAGAAGAGAGAGAACTCATAAGA 59.337 38.462 4.64 0.00 44.79 2.10
151 152 6.866480 AGCAAGAAGAGAGAGAACTCATAAG 58.134 40.000 4.64 0.00 44.79 1.73
152 153 6.435591 TGAGCAAGAAGAGAGAGAACTCATAA 59.564 38.462 4.64 0.00 44.79 1.90
153 154 5.948758 TGAGCAAGAAGAGAGAGAACTCATA 59.051 40.000 4.64 0.00 44.79 2.15
154 155 4.771577 TGAGCAAGAAGAGAGAGAACTCAT 59.228 41.667 4.64 0.00 44.79 2.90
155 156 4.148079 TGAGCAAGAAGAGAGAGAACTCA 58.852 43.478 4.64 0.00 44.79 3.41
156 157 4.782019 TGAGCAAGAAGAGAGAGAACTC 57.218 45.455 0.00 0.00 42.90 3.01
157 158 4.771577 TGATGAGCAAGAAGAGAGAGAACT 59.228 41.667 0.00 0.00 0.00 3.01
158 159 5.070770 TGATGAGCAAGAAGAGAGAGAAC 57.929 43.478 0.00 0.00 0.00 3.01
159 160 5.936187 ATGATGAGCAAGAAGAGAGAGAA 57.064 39.130 0.00 0.00 0.00 2.87
160 161 5.936187 AATGATGAGCAAGAAGAGAGAGA 57.064 39.130 0.00 0.00 0.00 3.10
161 162 8.145767 AGATAAATGATGAGCAAGAAGAGAGAG 58.854 37.037 0.00 0.00 0.00 3.20
162 163 8.020777 AGATAAATGATGAGCAAGAAGAGAGA 57.979 34.615 0.00 0.00 0.00 3.10
163 164 8.665643 AAGATAAATGATGAGCAAGAAGAGAG 57.334 34.615 0.00 0.00 0.00 3.20
166 167 9.842775 ACATAAGATAAATGATGAGCAAGAAGA 57.157 29.630 0.00 0.00 0.00 2.87
167 168 9.880064 CACATAAGATAAATGATGAGCAAGAAG 57.120 33.333 0.00 0.00 0.00 2.85
168 169 8.843262 CCACATAAGATAAATGATGAGCAAGAA 58.157 33.333 0.00 0.00 0.00 2.52
169 170 7.040892 GCCACATAAGATAAATGATGAGCAAGA 60.041 37.037 0.00 0.00 0.00 3.02
170 171 7.082602 GCCACATAAGATAAATGATGAGCAAG 58.917 38.462 0.00 0.00 0.00 4.01
171 172 6.546772 TGCCACATAAGATAAATGATGAGCAA 59.453 34.615 0.00 0.00 0.00 3.91
172 173 6.016860 GTGCCACATAAGATAAATGATGAGCA 60.017 38.462 0.00 0.00 0.00 4.26
173 174 6.206243 AGTGCCACATAAGATAAATGATGAGC 59.794 38.462 0.00 0.00 0.00 4.26
174 175 7.741027 AGTGCCACATAAGATAAATGATGAG 57.259 36.000 0.00 0.00 0.00 2.90
175 176 7.994911 AGAAGTGCCACATAAGATAAATGATGA 59.005 33.333 0.00 0.00 0.00 2.92
176 177 8.162878 AGAAGTGCCACATAAGATAAATGATG 57.837 34.615 0.00 0.00 0.00 3.07
177 178 9.851686 TTAGAAGTGCCACATAAGATAAATGAT 57.148 29.630 0.00 0.00 0.00 2.45
178 179 9.679661 TTTAGAAGTGCCACATAAGATAAATGA 57.320 29.630 0.00 0.00 0.00 2.57
184 185 9.461312 TGTTATTTTAGAAGTGCCACATAAGAT 57.539 29.630 0.00 0.00 0.00 2.40
185 186 8.856153 TGTTATTTTAGAAGTGCCACATAAGA 57.144 30.769 0.00 0.00 0.00 2.10
186 187 9.722056 GATGTTATTTTAGAAGTGCCACATAAG 57.278 33.333 0.00 0.00 0.00 1.73
187 188 9.237187 TGATGTTATTTTAGAAGTGCCACATAA 57.763 29.630 0.00 0.00 0.00 1.90
188 189 8.800370 TGATGTTATTTTAGAAGTGCCACATA 57.200 30.769 0.00 0.00 0.00 2.29
189 190 7.701539 TGATGTTATTTTAGAAGTGCCACAT 57.298 32.000 0.00 0.00 0.00 3.21
190 191 7.701539 ATGATGTTATTTTAGAAGTGCCACA 57.298 32.000 0.00 0.00 0.00 4.17
191 192 8.028938 ACAATGATGTTATTTTAGAAGTGCCAC 58.971 33.333 0.00 0.00 35.91 5.01
192 193 8.121305 ACAATGATGTTATTTTAGAAGTGCCA 57.879 30.769 0.00 0.00 35.91 4.92
193 194 9.503427 GTACAATGATGTTATTTTAGAAGTGCC 57.497 33.333 0.00 0.00 41.05 5.01
206 207 8.711457 CGAATATCAGCATGTACAATGATGTTA 58.289 33.333 22.26 17.17 34.79 2.41
207 208 7.578852 CGAATATCAGCATGTACAATGATGTT 58.421 34.615 22.26 21.48 36.56 2.71
208 209 6.347969 GCGAATATCAGCATGTACAATGATGT 60.348 38.462 22.26 16.61 38.13 3.06
209 210 6.019762 GCGAATATCAGCATGTACAATGATG 58.980 40.000 22.26 18.22 37.40 3.07
210 211 5.122869 GGCGAATATCAGCATGTACAATGAT 59.877 40.000 19.39 19.39 37.40 2.45
211 212 4.452114 GGCGAATATCAGCATGTACAATGA 59.548 41.667 0.00 5.44 37.40 2.57
212 213 4.213906 TGGCGAATATCAGCATGTACAATG 59.786 41.667 0.00 0.00 37.40 2.82
213 214 4.388485 TGGCGAATATCAGCATGTACAAT 58.612 39.130 0.00 0.00 37.40 2.71
214 215 3.802866 TGGCGAATATCAGCATGTACAA 58.197 40.909 0.00 0.00 37.40 2.41
215 216 3.467374 TGGCGAATATCAGCATGTACA 57.533 42.857 0.00 0.00 37.40 2.90
216 217 3.809832 ACTTGGCGAATATCAGCATGTAC 59.190 43.478 0.00 0.00 37.40 2.90
217 218 4.071961 ACTTGGCGAATATCAGCATGTA 57.928 40.909 0.00 0.00 37.40 2.29
218 219 2.923121 ACTTGGCGAATATCAGCATGT 58.077 42.857 0.00 0.00 37.40 3.21
219 220 3.976793 AACTTGGCGAATATCAGCATG 57.023 42.857 5.00 0.00 34.54 4.06
220 221 3.696051 ACAAACTTGGCGAATATCAGCAT 59.304 39.130 5.00 0.00 34.54 3.79
221 222 3.081061 ACAAACTTGGCGAATATCAGCA 58.919 40.909 5.00 0.00 34.54 4.41
222 223 3.375299 AGACAAACTTGGCGAATATCAGC 59.625 43.478 0.00 0.00 42.41 4.26
223 224 4.259970 CGAGACAAACTTGGCGAATATCAG 60.260 45.833 0.00 0.00 42.41 2.90
224 225 3.616821 CGAGACAAACTTGGCGAATATCA 59.383 43.478 0.00 0.00 42.41 2.15
225 226 3.863424 TCGAGACAAACTTGGCGAATATC 59.137 43.478 0.00 0.00 42.41 1.63
229 230 1.202486 AGTCGAGACAAACTTGGCGAA 60.202 47.619 5.99 0.00 42.41 4.70
232 233 2.354821 ACAAAGTCGAGACAAACTTGGC 59.645 45.455 5.99 0.00 35.93 4.52
259 260 6.545298 TGCCTCTTTTTAAATTTTTGCCATGT 59.455 30.769 0.00 0.00 0.00 3.21
262 263 6.601217 AGTTGCCTCTTTTTAAATTTTTGCCA 59.399 30.769 0.00 0.00 0.00 4.92
266 267 9.116067 GGGTTAGTTGCCTCTTTTTAAATTTTT 57.884 29.630 0.00 0.00 0.00 1.94
270 271 5.047590 CGGGGTTAGTTGCCTCTTTTTAAAT 60.048 40.000 0.00 0.00 0.00 1.40
274 275 2.235891 CGGGGTTAGTTGCCTCTTTTT 58.764 47.619 0.00 0.00 0.00 1.94
278 279 2.669240 GCGGGGTTAGTTGCCTCT 59.331 61.111 0.00 0.00 0.00 3.69
309 310 6.042208 GGACTGTACTCTCCTTATTTAGCCAT 59.958 42.308 0.00 0.00 0.00 4.40
315 317 6.407074 CGGAATGGACTGTACTCTCCTTATTT 60.407 42.308 9.88 1.40 0.00 1.40
322 324 2.223618 GCTCGGAATGGACTGTACTCTC 60.224 54.545 0.00 0.00 0.00 3.20
323 325 1.751924 GCTCGGAATGGACTGTACTCT 59.248 52.381 0.00 0.00 0.00 3.24
324 326 1.476891 TGCTCGGAATGGACTGTACTC 59.523 52.381 0.00 0.00 0.00 2.59
325 327 1.557099 TGCTCGGAATGGACTGTACT 58.443 50.000 0.00 0.00 0.00 2.73
326 328 2.380084 TTGCTCGGAATGGACTGTAC 57.620 50.000 0.00 0.00 0.00 2.90
331 333 4.192317 AGTATTCTTTGCTCGGAATGGAC 58.808 43.478 8.20 2.04 34.52 4.02
346 348 9.860898 GCATTTACAAATTCTTTGGAGTATTCT 57.139 29.630 4.77 0.00 44.81 2.40
347 349 9.087424 GGCATTTACAAATTCTTTGGAGTATTC 57.913 33.333 4.77 0.00 44.81 1.75
348 350 8.592809 TGGCATTTACAAATTCTTTGGAGTATT 58.407 29.630 4.77 0.00 44.81 1.89
349 351 8.133024 TGGCATTTACAAATTCTTTGGAGTAT 57.867 30.769 4.77 0.00 44.81 2.12
350 352 7.531857 TGGCATTTACAAATTCTTTGGAGTA 57.468 32.000 4.77 0.00 44.81 2.59
351 353 6.418057 TGGCATTTACAAATTCTTTGGAGT 57.582 33.333 4.77 0.00 44.81 3.85
352 354 6.930722 ACTTGGCATTTACAAATTCTTTGGAG 59.069 34.615 4.77 0.00 44.81 3.86
353 355 6.705381 CACTTGGCATTTACAAATTCTTTGGA 59.295 34.615 4.77 0.00 44.81 3.53
354 356 6.705381 TCACTTGGCATTTACAAATTCTTTGG 59.295 34.615 4.77 0.00 44.81 3.28
377 382 5.418840 GGTCCTCTTGCCATTATTTTTCTCA 59.581 40.000 0.00 0.00 0.00 3.27
428 436 4.562757 GCATGGTGGCTCCTTATATAACGA 60.563 45.833 7.19 0.00 37.07 3.85
447 455 2.943345 GATTAGCCGCGTCCGCATG 61.943 63.158 12.58 3.27 42.06 4.06
448 456 2.661866 GATTAGCCGCGTCCGCAT 60.662 61.111 12.58 0.00 42.06 4.73
449 457 3.833645 AGATTAGCCGCGTCCGCA 61.834 61.111 12.58 0.00 42.06 5.69
450 458 3.330853 CAGATTAGCCGCGTCCGC 61.331 66.667 4.92 0.45 37.85 5.54
451 459 3.330853 GCAGATTAGCCGCGTCCG 61.331 66.667 4.92 0.00 0.00 4.79
452 460 2.202878 TGCAGATTAGCCGCGTCC 60.203 61.111 4.92 0.00 0.00 4.79
453 461 2.526120 GGTGCAGATTAGCCGCGTC 61.526 63.158 4.92 0.00 0.00 5.19
454 462 2.511600 GGTGCAGATTAGCCGCGT 60.512 61.111 4.92 0.00 0.00 6.01
455 463 3.272334 GGGTGCAGATTAGCCGCG 61.272 66.667 0.00 0.00 0.00 6.46
458 466 1.889573 GCTCGGGTGCAGATTAGCC 60.890 63.158 0.00 0.00 0.00 3.93
459 467 0.878086 GAGCTCGGGTGCAGATTAGC 60.878 60.000 0.00 0.00 34.99 3.09
460 468 0.461548 TGAGCTCGGGTGCAGATTAG 59.538 55.000 9.64 0.00 34.99 1.73
461 469 1.123077 ATGAGCTCGGGTGCAGATTA 58.877 50.000 9.64 0.00 34.99 1.75
462 470 1.123077 TATGAGCTCGGGTGCAGATT 58.877 50.000 9.64 0.00 34.99 2.40
463 471 1.001746 CATATGAGCTCGGGTGCAGAT 59.998 52.381 9.64 0.00 34.99 2.90
464 472 0.390492 CATATGAGCTCGGGTGCAGA 59.610 55.000 9.64 0.00 34.99 4.26
465 473 1.226686 GCATATGAGCTCGGGTGCAG 61.227 60.000 23.72 7.32 34.99 4.41
466 474 1.227645 GCATATGAGCTCGGGTGCA 60.228 57.895 23.72 2.95 34.99 4.57
467 475 1.070445 AGCATATGAGCTCGGGTGC 59.930 57.895 22.13 22.13 42.18 5.01
483 491 4.708726 ATTTTACTGTTCATGCAGGAGC 57.291 40.909 8.37 8.37 40.59 4.70
484 492 6.258230 TCAATTTTACTGTTCATGCAGGAG 57.742 37.500 0.00 0.00 40.59 3.69
485 493 6.647334 TTCAATTTTACTGTTCATGCAGGA 57.353 33.333 0.00 0.00 40.59 3.86
486 494 7.712264 TTTTCAATTTTACTGTTCATGCAGG 57.288 32.000 0.00 0.00 40.59 4.85
549 557 9.899226 GCACTTAGAACTTTTGTCAATATTTCT 57.101 29.630 11.47 11.47 0.00 2.52
550 558 9.129209 GGCACTTAGAACTTTTGTCAATATTTC 57.871 33.333 0.00 0.00 0.00 2.17
551 559 8.860088 AGGCACTTAGAACTTTTGTCAATATTT 58.140 29.630 0.00 0.00 27.25 1.40
552 560 8.299570 CAGGCACTTAGAACTTTTGTCAATATT 58.700 33.333 0.00 0.00 34.60 1.28
553 561 7.575720 GCAGGCACTTAGAACTTTTGTCAATAT 60.576 37.037 0.00 0.00 34.60 1.28
554 562 6.293955 GCAGGCACTTAGAACTTTTGTCAATA 60.294 38.462 0.00 0.00 34.60 1.90
555 563 5.507985 GCAGGCACTTAGAACTTTTGTCAAT 60.508 40.000 0.00 0.00 34.60 2.57
556 564 4.202010 GCAGGCACTTAGAACTTTTGTCAA 60.202 41.667 0.00 0.00 34.60 3.18
557 565 3.315191 GCAGGCACTTAGAACTTTTGTCA 59.685 43.478 0.00 0.00 34.60 3.58
558 566 3.315191 TGCAGGCACTTAGAACTTTTGTC 59.685 43.478 0.00 0.00 34.60 3.18
559 567 3.287222 TGCAGGCACTTAGAACTTTTGT 58.713 40.909 0.00 0.00 34.60 2.83
560 568 3.988379 TGCAGGCACTTAGAACTTTTG 57.012 42.857 0.00 0.00 34.60 2.44
561 569 5.337578 TTTTGCAGGCACTTAGAACTTTT 57.662 34.783 0.00 0.00 34.60 2.27
562 570 5.337578 TTTTTGCAGGCACTTAGAACTTT 57.662 34.783 0.00 0.00 34.60 2.66
563 571 5.535753 ATTTTTGCAGGCACTTAGAACTT 57.464 34.783 0.00 0.00 34.60 2.66
564 572 5.532557 GAATTTTTGCAGGCACTTAGAACT 58.467 37.500 0.00 0.00 34.60 3.01
565 573 4.382754 CGAATTTTTGCAGGCACTTAGAAC 59.617 41.667 0.00 0.00 34.60 3.01
566 574 4.037446 ACGAATTTTTGCAGGCACTTAGAA 59.963 37.500 0.00 0.00 34.60 2.10
567 575 3.568007 ACGAATTTTTGCAGGCACTTAGA 59.432 39.130 0.00 0.00 34.60 2.10
568 576 3.900941 ACGAATTTTTGCAGGCACTTAG 58.099 40.909 0.00 0.00 34.60 2.18
569 577 3.316588 TGACGAATTTTTGCAGGCACTTA 59.683 39.130 0.00 0.00 34.60 2.24
570 578 2.100584 TGACGAATTTTTGCAGGCACTT 59.899 40.909 0.00 0.00 34.60 3.16
571 579 1.680735 TGACGAATTTTTGCAGGCACT 59.319 42.857 0.00 0.00 43.88 4.40
572 580 2.132740 TGACGAATTTTTGCAGGCAC 57.867 45.000 0.00 0.00 0.00 5.01
573 581 2.295629 TCATGACGAATTTTTGCAGGCA 59.704 40.909 0.00 0.00 0.00 4.75
574 582 2.945278 TCATGACGAATTTTTGCAGGC 58.055 42.857 0.00 0.00 0.00 4.85
575 583 5.634439 TGATTTCATGACGAATTTTTGCAGG 59.366 36.000 0.00 0.00 32.32 4.85
576 584 6.144241 TGTGATTTCATGACGAATTTTTGCAG 59.856 34.615 0.00 0.00 32.32 4.41
577 585 5.981915 TGTGATTTCATGACGAATTTTTGCA 59.018 32.000 0.00 0.00 32.32 4.08
578 586 6.450845 TGTGATTTCATGACGAATTTTTGC 57.549 33.333 0.00 0.00 32.32 3.68
579 587 8.164153 GGAATGTGATTTCATGACGAATTTTTG 58.836 33.333 0.00 0.00 32.32 2.44
580 588 8.090214 AGGAATGTGATTTCATGACGAATTTTT 58.910 29.630 0.00 0.00 32.32 1.94
581 589 7.605449 AGGAATGTGATTTCATGACGAATTTT 58.395 30.769 0.00 0.00 32.32 1.82
582 590 7.161773 AGGAATGTGATTTCATGACGAATTT 57.838 32.000 0.00 0.00 32.32 1.82
583 591 6.764308 AGGAATGTGATTTCATGACGAATT 57.236 33.333 0.00 0.00 32.32 2.17
584 592 7.275183 TCTAGGAATGTGATTTCATGACGAAT 58.725 34.615 0.00 0.00 32.32 3.34
585 593 6.639563 TCTAGGAATGTGATTTCATGACGAA 58.360 36.000 0.00 0.00 0.00 3.85
586 594 6.220726 TCTAGGAATGTGATTTCATGACGA 57.779 37.500 0.00 0.00 0.00 4.20
587 595 5.464722 CCTCTAGGAATGTGATTTCATGACG 59.535 44.000 0.00 0.00 37.39 4.35
588 596 5.762218 CCCTCTAGGAATGTGATTTCATGAC 59.238 44.000 0.00 0.00 38.24 3.06
589 597 5.688500 GCCCTCTAGGAATGTGATTTCATGA 60.689 44.000 0.00 0.00 38.24 3.07
590 598 4.518211 GCCCTCTAGGAATGTGATTTCATG 59.482 45.833 0.00 0.00 38.24 3.07
591 599 4.723309 GCCCTCTAGGAATGTGATTTCAT 58.277 43.478 0.00 0.00 38.24 2.57
592 600 3.432186 CGCCCTCTAGGAATGTGATTTCA 60.432 47.826 0.00 0.00 38.24 2.69
593 601 3.134458 CGCCCTCTAGGAATGTGATTTC 58.866 50.000 0.00 0.00 38.24 2.17
594 602 2.505819 ACGCCCTCTAGGAATGTGATTT 59.494 45.455 0.00 0.00 38.24 2.17
595 603 2.119495 ACGCCCTCTAGGAATGTGATT 58.881 47.619 0.00 0.00 38.24 2.57
596 604 1.414181 CACGCCCTCTAGGAATGTGAT 59.586 52.381 0.00 0.00 38.24 3.06
597 605 0.824109 CACGCCCTCTAGGAATGTGA 59.176 55.000 0.00 0.00 38.24 3.58
598 606 0.179073 CCACGCCCTCTAGGAATGTG 60.179 60.000 0.00 3.32 38.24 3.21
599 607 1.972660 GCCACGCCCTCTAGGAATGT 61.973 60.000 0.00 0.00 38.24 2.71
600 608 1.227674 GCCACGCCCTCTAGGAATG 60.228 63.158 0.00 0.00 38.24 2.67
601 609 1.271840 TTGCCACGCCCTCTAGGAAT 61.272 55.000 0.00 0.00 38.24 3.01
602 610 1.485294 TTTGCCACGCCCTCTAGGAA 61.485 55.000 0.00 0.00 38.24 3.36
603 611 1.485294 TTTTGCCACGCCCTCTAGGA 61.485 55.000 0.00 0.00 38.24 2.94
604 612 0.608035 TTTTTGCCACGCCCTCTAGG 60.608 55.000 0.00 0.00 39.47 3.02
605 613 2.941210 TTTTTGCCACGCCCTCTAG 58.059 52.632 0.00 0.00 0.00 2.43
631 639 9.998106 TGAAAGTAGCTTTTTCAGAGTACTATT 57.002 29.630 17.30 0.00 39.05 1.73
632 640 9.998106 TTGAAAGTAGCTTTTTCAGAGTACTAT 57.002 29.630 19.21 0.00 43.22 2.12
633 641 9.826574 TTTGAAAGTAGCTTTTTCAGAGTACTA 57.173 29.630 19.21 6.79 43.22 1.82
634 642 8.613482 GTTTGAAAGTAGCTTTTTCAGAGTACT 58.387 33.333 19.21 0.00 43.22 2.73
635 643 7.583040 CGTTTGAAAGTAGCTTTTTCAGAGTAC 59.417 37.037 19.21 15.67 43.22 2.73
636 644 7.627340 CGTTTGAAAGTAGCTTTTTCAGAGTA 58.373 34.615 19.21 8.08 43.22 2.59
637 645 6.487103 CGTTTGAAAGTAGCTTTTTCAGAGT 58.513 36.000 19.21 0.00 43.22 3.24
638 646 5.396654 GCGTTTGAAAGTAGCTTTTTCAGAG 59.603 40.000 19.21 16.17 43.22 3.35
639 647 5.163703 TGCGTTTGAAAGTAGCTTTTTCAGA 60.164 36.000 19.21 15.01 43.22 3.27
640 648 5.034152 TGCGTTTGAAAGTAGCTTTTTCAG 58.966 37.500 19.21 12.77 43.22 3.02
641 649 4.987832 TGCGTTTGAAAGTAGCTTTTTCA 58.012 34.783 17.30 17.30 41.40 2.69
642 650 6.510746 AATGCGTTTGAAAGTAGCTTTTTC 57.489 33.333 13.56 13.56 33.49 2.29
643 651 6.902224 AAATGCGTTTGAAAGTAGCTTTTT 57.098 29.167 2.32 0.00 33.49 1.94
644 652 6.902224 AAAATGCGTTTGAAAGTAGCTTTT 57.098 29.167 4.29 0.00 36.97 2.27
656 664 4.712191 TCATTGCTTCAAAATGCGTTTG 57.288 36.364 4.29 5.51 46.86 2.93
657 665 5.927954 ATTCATTGCTTCAAAATGCGTTT 57.072 30.435 0.00 0.00 35.43 3.60
658 666 5.927954 AATTCATTGCTTCAAAATGCGTT 57.072 30.435 0.00 0.00 35.43 4.84
659 667 5.236911 ACAAATTCATTGCTTCAAAATGCGT 59.763 32.000 0.00 0.00 43.13 5.24
660 668 5.681880 ACAAATTCATTGCTTCAAAATGCG 58.318 33.333 0.00 0.00 43.13 4.73
661 669 7.917720 AAACAAATTCATTGCTTCAAAATGC 57.082 28.000 0.00 0.00 43.13 3.56
697 705 8.217131 TCATCATGAAATCACATTCCTGTAAG 57.783 34.615 0.00 0.00 33.14 2.34
698 706 8.578448 TTCATCATGAAATCACATTCCTGTAA 57.422 30.769 0.00 0.00 32.71 2.41
699 707 8.756486 ATTCATCATGAAATCACATTCCTGTA 57.244 30.769 3.63 0.00 40.12 2.74
700 708 7.655521 ATTCATCATGAAATCACATTCCTGT 57.344 32.000 3.63 0.00 40.12 4.00
701 709 8.942338 AAATTCATCATGAAATCACATTCCTG 57.058 30.769 3.63 0.00 40.12 3.86
702 710 9.953565 AAAAATTCATCATGAAATCACATTCCT 57.046 25.926 3.63 0.00 40.12 3.36
703 711 9.982291 CAAAAATTCATCATGAAATCACATTCC 57.018 29.630 3.63 0.00 40.12 3.01
704 712 9.485591 GCAAAAATTCATCATGAAATCACATTC 57.514 29.630 3.63 0.00 40.12 2.67
705 713 9.004717 TGCAAAAATTCATCATGAAATCACATT 57.995 25.926 3.63 0.00 40.12 2.71
706 714 8.554835 TGCAAAAATTCATCATGAAATCACAT 57.445 26.923 3.63 0.00 40.12 3.21
707 715 7.118535 CCTGCAAAAATTCATCATGAAATCACA 59.881 33.333 3.63 0.00 40.12 3.58
708 716 7.461107 CCTGCAAAAATTCATCATGAAATCAC 58.539 34.615 3.63 0.00 40.12 3.06
709 717 6.092944 GCCTGCAAAAATTCATCATGAAATCA 59.907 34.615 3.63 0.00 40.12 2.57
710 718 6.092944 TGCCTGCAAAAATTCATCATGAAATC 59.907 34.615 3.63 0.00 40.12 2.17
711 719 5.941058 TGCCTGCAAAAATTCATCATGAAAT 59.059 32.000 3.63 0.00 40.12 2.17
712 720 5.179742 GTGCCTGCAAAAATTCATCATGAAA 59.820 36.000 3.63 0.00 40.12 2.69
713 721 4.691685 GTGCCTGCAAAAATTCATCATGAA 59.308 37.500 1.59 1.59 41.09 2.57
714 722 4.020928 AGTGCCTGCAAAAATTCATCATGA 60.021 37.500 0.00 0.00 0.00 3.07
715 723 4.250464 AGTGCCTGCAAAAATTCATCATG 58.750 39.130 0.00 0.00 0.00 3.07
716 724 4.546829 AGTGCCTGCAAAAATTCATCAT 57.453 36.364 0.00 0.00 0.00 2.45
717 725 4.339872 AAGTGCCTGCAAAAATTCATCA 57.660 36.364 0.00 0.00 0.00 3.07
718 726 5.713025 TCTAAGTGCCTGCAAAAATTCATC 58.287 37.500 0.00 0.00 0.00 2.92
719 727 5.726980 TCTAAGTGCCTGCAAAAATTCAT 57.273 34.783 0.00 0.00 0.00 2.57
720 728 5.068987 AGTTCTAAGTGCCTGCAAAAATTCA 59.931 36.000 0.00 0.00 0.00 2.57
721 729 5.532557 AGTTCTAAGTGCCTGCAAAAATTC 58.467 37.500 0.00 0.00 0.00 2.17
722 730 5.535753 AGTTCTAAGTGCCTGCAAAAATT 57.464 34.783 0.00 0.00 0.00 1.82
723 731 5.535753 AAGTTCTAAGTGCCTGCAAAAAT 57.464 34.783 0.00 0.00 0.00 1.82
724 732 5.337578 AAAGTTCTAAGTGCCTGCAAAAA 57.662 34.783 0.00 0.00 0.00 1.94
725 733 5.108517 CAAAAGTTCTAAGTGCCTGCAAAA 58.891 37.500 0.00 0.00 0.00 2.44
726 734 4.159506 ACAAAAGTTCTAAGTGCCTGCAAA 59.840 37.500 0.00 0.00 0.00 3.68
727 735 3.699038 ACAAAAGTTCTAAGTGCCTGCAA 59.301 39.130 0.00 0.00 0.00 4.08
728 736 3.287222 ACAAAAGTTCTAAGTGCCTGCA 58.713 40.909 0.00 0.00 0.00 4.41
729 737 3.315191 TGACAAAAGTTCTAAGTGCCTGC 59.685 43.478 0.00 0.00 0.00 4.85
730 738 5.499139 TTGACAAAAGTTCTAAGTGCCTG 57.501 39.130 0.00 0.00 0.00 4.85
731 739 5.594317 ACATTGACAAAAGTTCTAAGTGCCT 59.406 36.000 0.00 0.00 0.00 4.75
732 740 5.831997 ACATTGACAAAAGTTCTAAGTGCC 58.168 37.500 0.00 0.00 0.00 5.01
733 741 7.702348 AGAAACATTGACAAAAGTTCTAAGTGC 59.298 33.333 9.09 0.00 0.00 4.40
734 742 9.226345 GAGAAACATTGACAAAAGTTCTAAGTG 57.774 33.333 9.09 0.00 0.00 3.16
735 743 9.178758 AGAGAAACATTGACAAAAGTTCTAAGT 57.821 29.630 9.09 0.00 0.00 2.24
736 744 9.657121 GAGAGAAACATTGACAAAAGTTCTAAG 57.343 33.333 9.09 0.00 0.00 2.18
737 745 9.173021 TGAGAGAAACATTGACAAAAGTTCTAA 57.827 29.630 9.09 0.00 0.00 2.10
738 746 8.731275 TGAGAGAAACATTGACAAAAGTTCTA 57.269 30.769 9.09 0.00 0.00 2.10
739 747 7.630242 TGAGAGAAACATTGACAAAAGTTCT 57.370 32.000 9.09 9.17 0.00 3.01
740 748 8.687824 TTTGAGAGAAACATTGACAAAAGTTC 57.312 30.769 9.09 5.33 0.00 3.01
741 749 9.487790 TTTTTGAGAGAAACATTGACAAAAGTT 57.512 25.926 0.00 0.00 37.18 2.66
798 806 5.627367 CCGCATGAACAGTAAAATCGAAAAA 59.373 36.000 0.00 0.00 0.00 1.94
799 807 5.150683 CCGCATGAACAGTAAAATCGAAAA 58.849 37.500 0.00 0.00 0.00 2.29
800 808 4.378978 CCCGCATGAACAGTAAAATCGAAA 60.379 41.667 0.00 0.00 0.00 3.46
801 809 3.126171 CCCGCATGAACAGTAAAATCGAA 59.874 43.478 0.00 0.00 0.00 3.71
802 810 2.675844 CCCGCATGAACAGTAAAATCGA 59.324 45.455 0.00 0.00 0.00 3.59
803 811 2.418628 ACCCGCATGAACAGTAAAATCG 59.581 45.455 0.00 0.00 0.00 3.34
804 812 3.758300 CACCCGCATGAACAGTAAAATC 58.242 45.455 0.00 0.00 0.00 2.17
805 813 2.094752 GCACCCGCATGAACAGTAAAAT 60.095 45.455 0.00 0.00 38.36 1.82
806 814 1.268352 GCACCCGCATGAACAGTAAAA 59.732 47.619 0.00 0.00 38.36 1.52
807 815 0.878416 GCACCCGCATGAACAGTAAA 59.122 50.000 0.00 0.00 38.36 2.01
808 816 0.250510 TGCACCCGCATGAACAGTAA 60.251 50.000 0.00 0.00 45.36 2.24
809 817 1.373059 TGCACCCGCATGAACAGTA 59.627 52.632 0.00 0.00 45.36 2.74
810 818 2.112928 TGCACCCGCATGAACAGT 59.887 55.556 0.00 0.00 45.36 3.55
819 827 2.313172 CGAGCTCATATGCACCCGC 61.313 63.158 15.40 0.00 39.24 6.13
820 828 1.665916 CCGAGCTCATATGCACCCG 60.666 63.158 15.40 0.00 34.99 5.28
821 829 1.302033 CCCGAGCTCATATGCACCC 60.302 63.158 15.40 0.00 34.99 4.61
822 830 0.882042 CACCCGAGCTCATATGCACC 60.882 60.000 15.40 0.00 34.99 5.01
823 831 1.502163 GCACCCGAGCTCATATGCAC 61.502 60.000 21.82 0.40 33.27 4.57
824 832 1.227645 GCACCCGAGCTCATATGCA 60.228 57.895 21.82 0.00 33.27 3.96
825 833 1.226686 CTGCACCCGAGCTCATATGC 61.227 60.000 20.59 20.59 34.99 3.14
826 834 0.390492 TCTGCACCCGAGCTCATATG 59.610 55.000 15.40 9.02 34.99 1.78
827 835 1.123077 TTCTGCACCCGAGCTCATAT 58.877 50.000 15.40 0.00 34.99 1.78
828 836 1.123077 ATTCTGCACCCGAGCTCATA 58.877 50.000 15.40 0.00 34.99 2.15
829 837 0.254178 AATTCTGCACCCGAGCTCAT 59.746 50.000 15.40 0.00 34.99 2.90
830 838 0.674581 CAATTCTGCACCCGAGCTCA 60.675 55.000 15.40 0.00 34.99 4.26
831 839 0.391661 TCAATTCTGCACCCGAGCTC 60.392 55.000 2.73 2.73 34.99 4.09
832 840 0.674895 GTCAATTCTGCACCCGAGCT 60.675 55.000 0.00 0.00 34.99 4.09
833 841 0.674895 AGTCAATTCTGCACCCGAGC 60.675 55.000 0.00 0.00 0.00 5.03
834 842 1.813513 AAGTCAATTCTGCACCCGAG 58.186 50.000 0.00 0.00 0.00 4.63
835 843 1.879380 CAAAGTCAATTCTGCACCCGA 59.121 47.619 0.00 0.00 0.00 5.14
836 844 1.879380 TCAAAGTCAATTCTGCACCCG 59.121 47.619 0.00 0.00 0.00 5.28
837 845 2.352127 GCTCAAAGTCAATTCTGCACCC 60.352 50.000 0.00 0.00 0.00 4.61
838 846 2.352127 GGCTCAAAGTCAATTCTGCACC 60.352 50.000 0.00 0.00 0.00 5.01
839 847 2.294233 TGGCTCAAAGTCAATTCTGCAC 59.706 45.455 0.00 0.00 0.00 4.57
840 848 2.294233 GTGGCTCAAAGTCAATTCTGCA 59.706 45.455 0.00 0.00 28.00 4.41
841 849 2.352127 GGTGGCTCAAAGTCAATTCTGC 60.352 50.000 0.00 0.00 28.00 4.26
842 850 2.886523 TGGTGGCTCAAAGTCAATTCTG 59.113 45.455 0.00 0.00 28.00 3.02
843 851 3.228188 TGGTGGCTCAAAGTCAATTCT 57.772 42.857 0.00 0.00 28.00 2.40
844 852 3.367703 CCATGGTGGCTCAAAGTCAATTC 60.368 47.826 2.57 0.00 28.00 2.17
845 853 2.564062 CCATGGTGGCTCAAAGTCAATT 59.436 45.455 2.57 0.00 28.00 2.32
846 854 2.173519 CCATGGTGGCTCAAAGTCAAT 58.826 47.619 2.57 0.00 28.00 2.57
847 855 1.619654 CCATGGTGGCTCAAAGTCAA 58.380 50.000 2.57 0.00 28.00 3.18
848 856 3.344703 CCATGGTGGCTCAAAGTCA 57.655 52.632 2.57 0.00 0.00 3.41
879 887 0.318441 TGAGAGGACAGAAGGCGTTG 59.682 55.000 0.00 0.00 0.00 4.10
888 896 0.605589 GGTGTCAGGTGAGAGGACAG 59.394 60.000 0.00 0.00 41.76 3.51
892 900 2.291282 ACTAGAGGTGTCAGGTGAGAGG 60.291 54.545 0.00 0.00 0.00 3.69
899 907 3.958018 ACACTAGACTAGAGGTGTCAGG 58.042 50.000 16.55 0.00 38.32 3.86
903 911 3.598299 GACGACACTAGACTAGAGGTGT 58.402 50.000 16.55 10.69 44.18 4.16
904 912 2.937799 GGACGACACTAGACTAGAGGTG 59.062 54.545 16.55 7.56 35.99 4.00
905 913 2.093021 GGGACGACACTAGACTAGAGGT 60.093 54.545 16.55 12.84 0.00 3.85
906 914 2.171027 AGGGACGACACTAGACTAGAGG 59.829 54.545 16.55 9.90 0.00 3.69
910 918 1.741732 GCGAGGGACGACACTAGACTA 60.742 57.143 0.95 0.00 45.77 2.59
912 920 1.428620 GCGAGGGACGACACTAGAC 59.571 63.158 0.95 0.00 45.77 2.59
948 956 0.318441 CGAGACTCTTGGAAGTGGCA 59.682 55.000 0.03 0.00 30.04 4.92
1119 1156 2.355481 AAGAACGCCGTGGACGAC 60.355 61.111 0.00 0.00 43.02 4.34
1120 1157 2.049802 GAAGAACGCCGTGGACGA 60.050 61.111 0.00 0.00 43.02 4.20
1121 1158 3.467119 CGAAGAACGCCGTGGACG 61.467 66.667 0.00 0.00 39.44 4.79
1191 1231 1.152881 GCCCTCCTCGCCAATGAAT 60.153 57.895 0.00 0.00 0.00 2.57
1193 1233 4.161295 CGCCCTCCTCGCCAATGA 62.161 66.667 0.00 0.00 0.00 2.57
1340 1380 4.699522 GGAGGCGGCGGAAGTTGT 62.700 66.667 9.78 0.00 0.00 3.32
1433 1473 0.259938 GAGGGTGAAATGGGGAGCAT 59.740 55.000 0.00 0.00 0.00 3.79
1438 1479 1.307647 CAGGGAGGGTGAAATGGGG 59.692 63.158 0.00 0.00 0.00 4.96
1454 1496 0.813610 TGTGCTGGTTCACCGAACAG 60.814 55.000 8.95 5.81 43.54 3.16
1455 1497 0.813610 CTGTGCTGGTTCACCGAACA 60.814 55.000 8.95 2.02 43.54 3.18
1493 1591 0.692419 AGGGGCAGATCGGTCAGAAT 60.692 55.000 0.00 0.00 0.00 2.40
1568 1666 5.130477 ACAAGGAGGAGACTTGAAGTACAAA 59.870 40.000 11.65 0.00 46.27 2.83
1869 2061 1.128809 TGGTTAGGGTTTGCGGGAGA 61.129 55.000 0.00 0.00 0.00 3.71
1886 2078 2.448542 ATGGGATCGGGGAGGTGG 60.449 66.667 0.00 0.00 0.00 4.61
1911 2107 1.615424 GTAGAAGGAGGGGGTGGCA 60.615 63.158 0.00 0.00 0.00 4.92
2015 2215 4.467084 GATGTCGGCGGCTTGGGA 62.467 66.667 14.51 0.00 0.00 4.37
2034 2234 1.482593 GATCGGAGAGGTGGATGTTGT 59.517 52.381 0.00 0.00 43.63 3.32
2118 2318 1.067071 GGTTGTACTCACGGAAGAGGG 60.067 57.143 6.72 0.00 39.97 4.30
2146 2346 3.188786 GCGAGACCGTCCACATGC 61.189 66.667 0.00 0.00 38.24 4.06
2212 2412 0.840722 AGAACCACCGGATGAGGGTT 60.841 55.000 9.46 13.48 45.82 4.11
2277 2477 0.386858 CACCGTATAGGCATCGTCCG 60.387 60.000 0.00 0.00 46.52 4.79
2339 2539 2.611224 CCTGCTGCAAGAAAACAATCCC 60.611 50.000 3.02 0.00 34.07 3.85
2368 2568 1.678970 GTCATTCTGGTGGCACCCC 60.679 63.158 32.61 10.94 37.50 4.95
2383 2583 2.571757 GCGTCGATGGTGGAGTCA 59.428 61.111 6.79 0.00 0.00 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.