Multiple sequence alignment - TraesCS7B01G370200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G370200 chr7B 100.000 2420 0 0 1 2420 635169708 635172127 0.000000e+00 4470.0
1 TraesCS7B01G370200 chr7B 93.188 1380 48 16 889 2238 635065003 635066366 0.000000e+00 1986.0
2 TraesCS7B01G370200 chr7B 89.748 595 41 6 889 1477 636433212 636432632 0.000000e+00 743.0
3 TraesCS7B01G370200 chr7B 89.262 596 53 5 889 1477 635300989 635301580 0.000000e+00 736.0
4 TraesCS7B01G370200 chr7B 94.231 416 20 3 477 889 665380019 665380433 1.220000e-177 632.0
5 TraesCS7B01G370200 chr7B 95.926 270 9 2 98 365 635064664 635064933 1.030000e-118 436.0
6 TraesCS7B01G370200 chr7B 84.518 394 22 17 98 480 635300632 635300997 1.060000e-93 353.0
7 TraesCS7B01G370200 chr7B 87.189 281 28 6 204 477 636433486 636433207 1.810000e-81 313.0
8 TraesCS7B01G370200 chr7B 92.147 191 14 1 2231 2420 635097195 635097385 3.970000e-68 268.0
9 TraesCS7B01G370200 chr7B 89.474 152 8 3 1734 1885 636432288 636432145 4.110000e-43 185.0
10 TraesCS7B01G370200 chr7B 84.324 185 19 9 1887 2065 636432113 636431933 3.200000e-39 172.0
11 TraesCS7B01G370200 chr7B 83.770 191 13 9 1551 1739 635301728 635301902 5.350000e-37 165.0
12 TraesCS7B01G370200 chr7B 87.879 132 6 4 1615 1742 635935435 635935310 1.940000e-31 147.0
13 TraesCS7B01G370200 chr7B 87.692 130 8 4 1615 1742 635748396 635748273 6.970000e-31 145.0
14 TraesCS7B01G370200 chr7B 93.023 86 4 2 397 480 635064926 635065011 9.080000e-25 124.0
15 TraesCS7B01G370200 chr7B 90.541 74 5 2 1671 1742 636432382 636432309 1.980000e-16 97.1
16 TraesCS7B01G370200 chr7B 100.000 39 0 0 1554 1592 635935477 635935439 3.340000e-09 73.1
17 TraesCS7B01G370200 chr7B 100.000 36 0 0 1557 1592 635748435 635748400 1.550000e-07 67.6
18 TraesCS7B01G370200 chr7D 89.748 595 46 5 889 1477 575149590 575149005 0.000000e+00 747.0
19 TraesCS7B01G370200 chr7D 88.704 602 48 10 889 1477 574925390 574924796 0.000000e+00 717.0
20 TraesCS7B01G370200 chr7D 88.927 587 56 5 889 1475 575218053 575217476 0.000000e+00 715.0
21 TraesCS7B01G370200 chr7D 90.353 539 36 7 896 1423 574874868 574875401 0.000000e+00 693.0
22 TraesCS7B01G370200 chr7D 86.316 190 12 8 1554 1739 574924635 574924456 6.830000e-46 195.0
23 TraesCS7B01G370200 chr7D 75.416 541 52 34 1554 2065 575073664 575073176 1.140000e-43 187.0
24 TraesCS7B01G370200 chr7D 82.000 200 10 8 1616 1795 575217314 575217121 1.940000e-31 147.0
25 TraesCS7B01G370200 chr7D 83.146 178 10 8 1615 1780 575148815 575148646 6.970000e-31 145.0
26 TraesCS7B01G370200 chr7D 88.095 126 7 4 1615 1739 574875638 574875756 2.510000e-30 143.0
27 TraesCS7B01G370200 chr7D 100.000 39 0 0 1554 1592 575148854 575148816 3.340000e-09 73.1
28 TraesCS7B01G370200 chr7D 95.238 42 2 0 1551 1592 574875596 574875637 1.550000e-07 67.6
29 TraesCS7B01G370200 chr7A 89.834 541 47 2 889 1423 664699320 664699858 0.000000e+00 688.0
30 TraesCS7B01G370200 chr7A 88.124 581 52 7 901 1477 664781165 664780598 0.000000e+00 675.0
31 TraesCS7B01G370200 chr7A 87.218 399 46 4 2026 2420 664629307 664629704 1.320000e-122 449.0
32 TraesCS7B01G370200 chr7A 89.963 269 16 5 1760 2027 664614063 664614321 1.070000e-88 337.0
33 TraesCS7B01G370200 chr7A 88.532 218 16 8 270 480 664699113 664699328 3.090000e-64 255.0
34 TraesCS7B01G370200 chr7A 78.717 343 37 15 1615 1945 664780402 664780084 1.900000e-46 196.0
35 TraesCS7B01G370200 chr7A 92.126 127 10 0 147 273 664698865 664698991 1.910000e-41 180.0
36 TraesCS7B01G370200 chr7A 86.364 132 11 3 1609 1739 664700130 664700255 1.170000e-28 137.0
37 TraesCS7B01G370200 chr7A 85.965 114 14 2 1615 1726 664872956 664872843 1.180000e-23 121.0
38 TraesCS7B01G370200 chr7A 78.947 190 25 9 1734 1922 664700273 664700448 5.470000e-22 115.0
39 TraesCS7B01G370200 chr7A 97.436 39 1 0 1554 1592 664780441 664780403 1.550000e-07 67.6
40 TraesCS7B01G370200 chr7A 100.000 31 0 0 1734 1764 664604063 664604093 9.350000e-05 58.4
41 TraesCS7B01G370200 chr1B 92.941 425 27 2 477 898 46835451 46835027 1.230000e-172 616.0
42 TraesCS7B01G370200 chr2B 92.941 425 23 6 480 899 593633415 593632993 1.590000e-171 612.0
43 TraesCS7B01G370200 chr1A 93.494 415 21 6 478 889 67651701 67651290 1.590000e-171 612.0
44 TraesCS7B01G370200 chr5B 93.659 410 23 3 482 889 639221887 639222295 5.720000e-171 610.0
45 TraesCS7B01G370200 chr6B 93.659 410 20 4 482 888 195830522 195830928 2.060000e-170 608.0
46 TraesCS7B01G370200 chr6B 93.187 411 24 4 482 889 682657592 682658001 3.440000e-168 601.0
47 TraesCS7B01G370200 chr3B 93.643 409 20 4 482 890 726267463 726267061 7.400000e-170 606.0
48 TraesCS7B01G370200 chr4A 93.187 411 23 4 482 889 647319075 647319483 1.240000e-167 599.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G370200 chr7B 635169708 635172127 2419 False 4470.000000 4470 100.000000 1 2420 1 chr7B.!!$F2 2419
1 TraesCS7B01G370200 chr7B 635064664 635066366 1702 False 848.666667 1986 94.045667 98 2238 3 chr7B.!!$F4 2140
2 TraesCS7B01G370200 chr7B 635300632 635301902 1270 False 418.000000 736 85.850000 98 1739 3 chr7B.!!$F5 1641
3 TraesCS7B01G370200 chr7B 636431933 636433486 1553 True 302.020000 743 88.255200 204 2065 5 chr7B.!!$R3 1861
4 TraesCS7B01G370200 chr7D 574924456 574925390 934 True 456.000000 717 87.510000 889 1739 2 chr7D.!!$R2 850
5 TraesCS7B01G370200 chr7D 575217121 575218053 932 True 431.000000 715 85.463500 889 1795 2 chr7D.!!$R4 906
6 TraesCS7B01G370200 chr7D 575148646 575149590 944 True 321.700000 747 90.964667 889 1780 3 chr7D.!!$R3 891
7 TraesCS7B01G370200 chr7D 574874868 574875756 888 False 301.200000 693 91.228667 896 1739 3 chr7D.!!$F1 843
8 TraesCS7B01G370200 chr7A 664780084 664781165 1081 True 312.866667 675 88.092333 901 1945 3 chr7A.!!$R2 1044
9 TraesCS7B01G370200 chr7A 664698865 664700448 1583 False 275.000000 688 87.160600 147 1922 5 chr7A.!!$F4 1775

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
475 617 0.517316 GCCTCAGTACAAACGCCTTG 59.483 55.0 0.0 0.0 41.19 3.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1431 1594 0.178973 AGGGTGAAACGGGGAAAAGG 60.179 55.0 0.0 0.0 38.12 3.11 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 8.548721 CCTACTAAATTGCGAGTTTAGTTATGG 58.451 37.037 19.39 15.99 45.31 2.74
27 28 7.316544 ACTAAATTGCGAGTTTAGTTATGGG 57.683 36.000 12.46 0.00 45.31 4.00
28 29 5.576447 AAATTGCGAGTTTAGTTATGGGG 57.424 39.130 0.00 0.00 0.00 4.96
29 30 3.706600 TTGCGAGTTTAGTTATGGGGT 57.293 42.857 0.00 0.00 0.00 4.95
30 31 2.980568 TGCGAGTTTAGTTATGGGGTG 58.019 47.619 0.00 0.00 0.00 4.61
31 32 2.285977 GCGAGTTTAGTTATGGGGTGG 58.714 52.381 0.00 0.00 0.00 4.61
32 33 2.355412 GCGAGTTTAGTTATGGGGTGGT 60.355 50.000 0.00 0.00 0.00 4.16
33 34 3.118665 GCGAGTTTAGTTATGGGGTGGTA 60.119 47.826 0.00 0.00 0.00 3.25
34 35 4.436332 CGAGTTTAGTTATGGGGTGGTAC 58.564 47.826 0.00 0.00 0.00 3.34
35 36 4.161001 CGAGTTTAGTTATGGGGTGGTACT 59.839 45.833 0.00 0.00 0.00 2.73
36 37 5.425630 GAGTTTAGTTATGGGGTGGTACTG 58.574 45.833 0.00 0.00 0.00 2.74
37 38 4.848086 AGTTTAGTTATGGGGTGGTACTGT 59.152 41.667 0.00 0.00 0.00 3.55
38 39 4.829872 TTAGTTATGGGGTGGTACTGTG 57.170 45.455 0.00 0.00 0.00 3.66
39 40 1.913419 AGTTATGGGGTGGTACTGTGG 59.087 52.381 0.00 0.00 0.00 4.17
40 41 1.631898 GTTATGGGGTGGTACTGTGGT 59.368 52.381 0.00 0.00 0.00 4.16
41 42 2.839425 GTTATGGGGTGGTACTGTGGTA 59.161 50.000 0.00 0.00 0.00 3.25
42 43 2.047769 ATGGGGTGGTACTGTGGTAA 57.952 50.000 0.00 0.00 0.00 2.85
43 44 1.058284 TGGGGTGGTACTGTGGTAAC 58.942 55.000 0.00 0.00 36.25 2.50
44 45 1.355112 GGGGTGGTACTGTGGTAACT 58.645 55.000 0.00 0.00 36.63 2.24
45 46 1.002773 GGGGTGGTACTGTGGTAACTG 59.997 57.143 0.00 0.00 36.63 3.16
46 47 1.002773 GGGTGGTACTGTGGTAACTGG 59.997 57.143 0.00 0.00 36.63 4.00
47 48 1.695788 GGTGGTACTGTGGTAACTGGT 59.304 52.381 0.00 0.00 36.63 4.00
48 49 2.899256 GGTGGTACTGTGGTAACTGGTA 59.101 50.000 0.00 0.00 36.63 3.25
49 50 3.324556 GGTGGTACTGTGGTAACTGGTAA 59.675 47.826 0.00 0.00 36.63 2.85
50 51 4.202346 GGTGGTACTGTGGTAACTGGTAAA 60.202 45.833 0.00 0.00 36.63 2.01
51 52 4.992951 GTGGTACTGTGGTAACTGGTAAAG 59.007 45.833 0.00 0.00 36.63 1.85
52 53 4.900652 TGGTACTGTGGTAACTGGTAAAGA 59.099 41.667 0.00 0.00 36.63 2.52
53 54 5.366186 TGGTACTGTGGTAACTGGTAAAGAA 59.634 40.000 0.00 0.00 36.63 2.52
54 55 6.043474 TGGTACTGTGGTAACTGGTAAAGAAT 59.957 38.462 0.00 0.00 36.63 2.40
55 56 6.592994 GGTACTGTGGTAACTGGTAAAGAATC 59.407 42.308 0.00 0.00 33.16 2.52
56 57 5.557866 ACTGTGGTAACTGGTAAAGAATCC 58.442 41.667 0.00 0.00 37.61 3.01
57 58 5.072600 ACTGTGGTAACTGGTAAAGAATCCA 59.927 40.000 0.00 0.00 37.61 3.41
58 59 5.310451 TGTGGTAACTGGTAAAGAATCCAC 58.690 41.667 0.00 0.00 40.23 4.02
59 60 4.698780 GTGGTAACTGGTAAAGAATCCACC 59.301 45.833 0.00 0.00 37.29 4.61
60 61 4.351407 TGGTAACTGGTAAAGAATCCACCA 59.649 41.667 0.00 0.00 40.01 4.17
61 62 5.163077 TGGTAACTGGTAAAGAATCCACCAA 60.163 40.000 1.50 0.00 41.65 3.67
62 63 5.771165 GGTAACTGGTAAAGAATCCACCAAA 59.229 40.000 1.50 0.00 41.65 3.28
63 64 6.072119 GGTAACTGGTAAAGAATCCACCAAAG 60.072 42.308 1.50 0.00 41.65 2.77
64 65 5.061721 ACTGGTAAAGAATCCACCAAAGT 57.938 39.130 1.50 0.00 41.65 2.66
65 66 5.070685 ACTGGTAAAGAATCCACCAAAGTC 58.929 41.667 1.50 0.00 41.65 3.01
66 67 5.055265 TGGTAAAGAATCCACCAAAGTCA 57.945 39.130 0.00 0.00 39.36 3.41
67 68 5.640147 TGGTAAAGAATCCACCAAAGTCAT 58.360 37.500 0.00 0.00 39.36 3.06
68 69 5.476599 TGGTAAAGAATCCACCAAAGTCATG 59.523 40.000 0.00 0.00 39.36 3.07
69 70 5.710099 GGTAAAGAATCCACCAAAGTCATGA 59.290 40.000 0.00 0.00 32.32 3.07
70 71 5.712152 AAAGAATCCACCAAAGTCATGAC 57.288 39.130 18.47 18.47 0.00 3.06
71 72 4.371624 AGAATCCACCAAAGTCATGACA 57.628 40.909 27.02 4.65 0.00 3.58
72 73 4.728772 AGAATCCACCAAAGTCATGACAA 58.271 39.130 27.02 3.14 0.00 3.18
73 74 5.139727 AGAATCCACCAAAGTCATGACAAA 58.860 37.500 27.02 4.13 0.00 2.83
74 75 5.776716 AGAATCCACCAAAGTCATGACAAAT 59.223 36.000 27.02 10.51 0.00 2.32
75 76 6.947733 AGAATCCACCAAAGTCATGACAAATA 59.052 34.615 27.02 5.11 0.00 1.40
76 77 6.764308 ATCCACCAAAGTCATGACAAATAG 57.236 37.500 27.02 13.70 0.00 1.73
77 78 5.875224 TCCACCAAAGTCATGACAAATAGA 58.125 37.500 27.02 11.80 0.00 1.98
78 79 6.303054 TCCACCAAAGTCATGACAAATAGAA 58.697 36.000 27.02 4.16 0.00 2.10
79 80 6.947733 TCCACCAAAGTCATGACAAATAGAAT 59.052 34.615 27.02 1.19 0.00 2.40
80 81 8.106462 TCCACCAAAGTCATGACAAATAGAATA 58.894 33.333 27.02 3.49 0.00 1.75
81 82 8.184192 CCACCAAAGTCATGACAAATAGAATAC 58.816 37.037 27.02 0.00 0.00 1.89
82 83 8.950210 CACCAAAGTCATGACAAATAGAATACT 58.050 33.333 27.02 0.00 0.00 2.12
83 84 8.950210 ACCAAAGTCATGACAAATAGAATACTG 58.050 33.333 27.02 6.74 0.00 2.74
84 85 7.912250 CCAAAGTCATGACAAATAGAATACTGC 59.088 37.037 27.02 0.00 0.00 4.40
85 86 8.671921 CAAAGTCATGACAAATAGAATACTGCT 58.328 33.333 27.02 0.00 0.00 4.24
86 87 9.890629 AAAGTCATGACAAATAGAATACTGCTA 57.109 29.630 27.02 0.00 0.00 3.49
87 88 8.879342 AGTCATGACAAATAGAATACTGCTAC 57.121 34.615 27.02 0.00 0.00 3.58
88 89 8.700051 AGTCATGACAAATAGAATACTGCTACT 58.300 33.333 27.02 0.00 0.00 2.57
89 90 8.759641 GTCATGACAAATAGAATACTGCTACTG 58.240 37.037 21.07 0.00 0.00 2.74
90 91 8.478066 TCATGACAAATAGAATACTGCTACTGT 58.522 33.333 0.00 0.00 0.00 3.55
91 92 9.750125 CATGACAAATAGAATACTGCTACTGTA 57.250 33.333 0.00 0.00 0.00 2.74
92 93 9.751542 ATGACAAATAGAATACTGCTACTGTAC 57.248 33.333 0.00 0.00 0.00 2.90
93 94 8.195436 TGACAAATAGAATACTGCTACTGTACC 58.805 37.037 0.00 0.00 0.00 3.34
94 95 7.498443 ACAAATAGAATACTGCTACTGTACCC 58.502 38.462 0.00 0.00 0.00 3.69
95 96 7.344871 ACAAATAGAATACTGCTACTGTACCCT 59.655 37.037 0.00 0.00 0.00 4.34
96 97 8.857098 CAAATAGAATACTGCTACTGTACCCTA 58.143 37.037 0.00 0.00 0.00 3.53
130 131 9.262472 GAATACTGCTACTGTTTGAAAAATACG 57.738 33.333 0.00 0.00 0.00 3.06
278 410 6.762108 AGTTTGCGTCGATTTAGTATGAAAG 58.238 36.000 0.00 0.00 0.00 2.62
282 414 3.493503 CGTCGATTTAGTATGAAAGGGGC 59.506 47.826 0.00 0.00 0.00 5.80
364 500 2.332063 TCCATCCCGAGCAAAGAATC 57.668 50.000 0.00 0.00 0.00 2.52
371 507 4.647611 TCCCGAGCAAAGAATCTGTAAAA 58.352 39.130 0.00 0.00 0.00 1.52
397 535 6.284459 ACAAACCGAGAAAAATAATGGCAAA 58.716 32.000 0.00 0.00 0.00 3.68
432 573 1.152030 ACAACCTCCAGCTCTCCCA 60.152 57.895 0.00 0.00 0.00 4.37
471 613 3.023591 GCCGCCTCAGTACAAACGC 62.024 63.158 0.00 0.00 0.00 4.84
472 614 2.388232 CCGCCTCAGTACAAACGCC 61.388 63.158 0.00 0.00 0.00 5.68
473 615 1.374252 CGCCTCAGTACAAACGCCT 60.374 57.895 0.00 0.00 0.00 5.52
474 616 0.949105 CGCCTCAGTACAAACGCCTT 60.949 55.000 0.00 0.00 0.00 4.35
475 617 0.517316 GCCTCAGTACAAACGCCTTG 59.483 55.000 0.00 0.00 41.19 3.61
477 619 2.868839 GCCTCAGTACAAACGCCTTGTA 60.869 50.000 6.60 6.60 46.75 2.41
483 625 2.736144 ACAAACGCCTTGTATCTCGA 57.264 45.000 1.82 0.00 46.75 4.04
484 626 3.034721 ACAAACGCCTTGTATCTCGAA 57.965 42.857 1.82 0.00 46.75 3.71
485 627 3.395639 ACAAACGCCTTGTATCTCGAAA 58.604 40.909 1.82 0.00 46.75 3.46
486 628 3.432252 ACAAACGCCTTGTATCTCGAAAG 59.568 43.478 1.82 0.00 46.75 2.62
487 629 3.314541 AACGCCTTGTATCTCGAAAGT 57.685 42.857 0.00 0.00 0.00 2.66
488 630 4.445452 AACGCCTTGTATCTCGAAAGTA 57.555 40.909 0.00 0.00 0.00 2.24
489 631 3.767278 ACGCCTTGTATCTCGAAAGTAC 58.233 45.455 0.00 0.00 0.00 2.73
490 632 3.114065 CGCCTTGTATCTCGAAAGTACC 58.886 50.000 0.00 0.00 0.00 3.34
491 633 3.428452 CGCCTTGTATCTCGAAAGTACCA 60.428 47.826 0.00 0.00 0.00 3.25
492 634 4.694339 GCCTTGTATCTCGAAAGTACCAT 58.306 43.478 0.00 0.00 0.00 3.55
493 635 5.116882 GCCTTGTATCTCGAAAGTACCATT 58.883 41.667 0.00 0.00 0.00 3.16
494 636 5.234543 GCCTTGTATCTCGAAAGTACCATTC 59.765 44.000 0.00 0.00 0.00 2.67
495 637 6.574350 CCTTGTATCTCGAAAGTACCATTCT 58.426 40.000 7.25 0.00 0.00 2.40
496 638 7.683704 GCCTTGTATCTCGAAAGTACCATTCTA 60.684 40.741 7.25 0.00 0.00 2.10
497 639 8.195436 CCTTGTATCTCGAAAGTACCATTCTAA 58.805 37.037 7.25 0.00 0.00 2.10
498 640 9.582431 CTTGTATCTCGAAAGTACCATTCTAAA 57.418 33.333 7.25 0.00 0.00 1.85
499 641 9.582431 TTGTATCTCGAAAGTACCATTCTAAAG 57.418 33.333 7.25 3.45 0.00 1.85
500 642 7.705325 TGTATCTCGAAAGTACCATTCTAAAGC 59.295 37.037 7.25 0.00 0.00 3.51
501 643 5.416947 TCTCGAAAGTACCATTCTAAAGCC 58.583 41.667 7.25 0.00 0.00 4.35
502 644 5.046878 TCTCGAAAGTACCATTCTAAAGCCA 60.047 40.000 7.25 0.00 0.00 4.75
503 645 5.741011 TCGAAAGTACCATTCTAAAGCCAT 58.259 37.500 7.25 0.00 0.00 4.40
504 646 5.584649 TCGAAAGTACCATTCTAAAGCCATG 59.415 40.000 7.25 0.00 0.00 3.66
505 647 5.584649 CGAAAGTACCATTCTAAAGCCATGA 59.415 40.000 0.00 0.00 0.00 3.07
506 648 6.238211 CGAAAGTACCATTCTAAAGCCATGAG 60.238 42.308 0.00 0.00 0.00 2.90
507 649 4.455606 AGTACCATTCTAAAGCCATGAGC 58.544 43.478 0.00 0.00 44.25 4.26
526 668 2.872370 GCAAATGCTCCTGATGTGAAC 58.128 47.619 0.00 0.00 38.21 3.18
527 669 2.229543 GCAAATGCTCCTGATGTGAACA 59.770 45.455 0.00 0.00 38.21 3.18
528 670 3.672511 GCAAATGCTCCTGATGTGAACAG 60.673 47.826 0.00 0.00 38.21 3.16
529 671 3.430042 AATGCTCCTGATGTGAACAGT 57.570 42.857 0.00 0.00 34.04 3.55
530 672 4.558226 AATGCTCCTGATGTGAACAGTA 57.442 40.909 0.00 0.00 34.04 2.74
531 673 4.558226 ATGCTCCTGATGTGAACAGTAA 57.442 40.909 0.00 0.00 34.04 2.24
532 674 4.350368 TGCTCCTGATGTGAACAGTAAA 57.650 40.909 0.00 0.00 34.04 2.01
533 675 4.713553 TGCTCCTGATGTGAACAGTAAAA 58.286 39.130 0.00 0.00 34.04 1.52
534 676 5.316167 TGCTCCTGATGTGAACAGTAAAAT 58.684 37.500 0.00 0.00 34.04 1.82
535 677 5.412594 TGCTCCTGATGTGAACAGTAAAATC 59.587 40.000 0.00 0.00 34.04 2.17
536 678 5.412594 GCTCCTGATGTGAACAGTAAAATCA 59.587 40.000 0.00 0.00 34.04 2.57
537 679 6.072508 GCTCCTGATGTGAACAGTAAAATCAA 60.073 38.462 0.00 0.00 34.04 2.57
538 680 7.522073 GCTCCTGATGTGAACAGTAAAATCAAA 60.522 37.037 0.00 0.00 34.04 2.69
539 681 8.231692 TCCTGATGTGAACAGTAAAATCAAAA 57.768 30.769 0.00 0.00 34.04 2.44
540 682 8.690884 TCCTGATGTGAACAGTAAAATCAAAAA 58.309 29.630 0.00 0.00 34.04 1.94
589 731 9.868277 TTCTGAATTTTGTTTGTGACATACTTT 57.132 25.926 7.63 0.00 38.26 2.66
590 732 9.515020 TCTGAATTTTGTTTGTGACATACTTTC 57.485 29.630 7.63 6.35 38.26 2.62
591 733 9.299963 CTGAATTTTGTTTGTGACATACTTTCA 57.700 29.630 7.63 9.61 38.26 2.69
592 734 9.081997 TGAATTTTGTTTGTGACATACTTTCAC 57.918 29.630 7.63 0.00 43.22 3.18
602 744 7.016361 GTGACATACTTTCACAAGTGTTTCT 57.984 36.000 0.00 0.00 43.54 2.52
603 745 7.472543 GTGACATACTTTCACAAGTGTTTCTT 58.527 34.615 0.00 0.00 43.54 2.52
618 760 9.771915 CAAGTGTTTCTTGTGCATTAAAATTTT 57.228 25.926 8.75 8.75 45.89 1.82
619 761 9.986833 AAGTGTTTCTTGTGCATTAAAATTTTC 57.013 25.926 6.72 0.00 34.77 2.29
620 762 9.160496 AGTGTTTCTTGTGCATTAAAATTTTCA 57.840 25.926 6.72 0.00 0.00 2.69
621 763 9.934190 GTGTTTCTTGTGCATTAAAATTTTCAT 57.066 25.926 6.72 0.00 0.00 2.57
626 768 9.708092 TCTTGTGCATTAAAATTTTCATCATGA 57.292 25.926 6.72 0.00 0.00 3.07
638 780 8.991243 AATTTTCATCATGAAATCACATTCGT 57.009 26.923 13.68 0.00 44.75 3.85
639 781 7.800015 TTTTCATCATGAAATCACATTCGTG 57.200 32.000 13.68 3.45 44.75 4.35
649 791 1.937359 CACATTCGTGAAAGTCGTGC 58.063 50.000 0.00 0.00 46.80 5.34
650 792 0.865769 ACATTCGTGAAAGTCGTGCC 59.134 50.000 0.00 0.00 0.00 5.01
651 793 0.865111 CATTCGTGAAAGTCGTGCCA 59.135 50.000 0.00 0.00 0.00 4.92
652 794 1.262950 CATTCGTGAAAGTCGTGCCAA 59.737 47.619 0.00 0.00 0.00 4.52
653 795 1.370609 TTCGTGAAAGTCGTGCCAAA 58.629 45.000 0.00 0.00 0.00 3.28
654 796 1.370609 TCGTGAAAGTCGTGCCAAAA 58.629 45.000 0.00 0.00 0.00 2.44
655 797 1.738350 TCGTGAAAGTCGTGCCAAAAA 59.262 42.857 0.00 0.00 0.00 1.94
679 821 6.535274 AACAAAATCAGAGCTTCAAAATGC 57.465 33.333 0.00 0.00 0.00 3.56
680 822 5.850614 ACAAAATCAGAGCTTCAAAATGCT 58.149 33.333 0.00 0.00 42.82 3.79
681 823 6.285990 ACAAAATCAGAGCTTCAAAATGCTT 58.714 32.000 0.00 0.00 39.91 3.91
682 824 6.764560 ACAAAATCAGAGCTTCAAAATGCTTT 59.235 30.769 0.00 0.00 39.91 3.51
683 825 7.281549 ACAAAATCAGAGCTTCAAAATGCTTTT 59.718 29.630 0.00 0.00 39.91 2.27
702 844 9.683069 ATGCTTTTGTAAGTAACATTTTCAGAG 57.317 29.630 0.00 0.00 38.10 3.35
703 845 7.647715 TGCTTTTGTAAGTAACATTTTCAGAGC 59.352 33.333 0.00 0.00 38.10 4.09
704 846 7.647715 GCTTTTGTAAGTAACATTTTCAGAGCA 59.352 33.333 0.00 0.00 38.10 4.26
705 847 9.683069 CTTTTGTAAGTAACATTTTCAGAGCAT 57.317 29.630 0.00 0.00 38.10 3.79
706 848 9.677567 TTTTGTAAGTAACATTTTCAGAGCATC 57.322 29.630 0.00 0.00 38.10 3.91
707 849 7.060600 TGTAAGTAACATTTTCAGAGCATCG 57.939 36.000 0.00 0.00 34.21 3.84
708 850 6.871492 TGTAAGTAACATTTTCAGAGCATCGA 59.129 34.615 0.00 0.00 34.21 3.59
709 851 6.992063 AAGTAACATTTTCAGAGCATCGAT 57.008 33.333 0.00 0.00 42.67 3.59
710 852 6.992063 AGTAACATTTTCAGAGCATCGATT 57.008 33.333 0.00 0.00 42.67 3.34
711 853 7.383102 AGTAACATTTTCAGAGCATCGATTT 57.617 32.000 0.00 0.00 42.67 2.17
712 854 7.820648 AGTAACATTTTCAGAGCATCGATTTT 58.179 30.769 0.00 0.00 42.67 1.82
713 855 6.939551 AACATTTTCAGAGCATCGATTTTG 57.060 33.333 0.00 0.00 42.67 2.44
714 856 6.017400 ACATTTTCAGAGCATCGATTTTGT 57.983 33.333 0.00 0.00 42.67 2.83
715 857 6.449698 ACATTTTCAGAGCATCGATTTTGTT 58.550 32.000 0.00 0.00 42.67 2.83
716 858 6.925165 ACATTTTCAGAGCATCGATTTTGTTT 59.075 30.769 0.00 0.00 42.67 2.83
717 859 7.439056 ACATTTTCAGAGCATCGATTTTGTTTT 59.561 29.630 0.00 0.00 42.67 2.43
718 860 7.769272 TTTTCAGAGCATCGATTTTGTTTTT 57.231 28.000 0.00 0.00 42.67 1.94
736 878 3.383698 TTTTTACCACACCTTCCACCA 57.616 42.857 0.00 0.00 0.00 4.17
737 879 3.383698 TTTTACCACACCTTCCACCAA 57.616 42.857 0.00 0.00 0.00 3.67
738 880 3.603965 TTTACCACACCTTCCACCAAT 57.396 42.857 0.00 0.00 0.00 3.16
739 881 2.577606 TACCACACCTTCCACCAATG 57.422 50.000 0.00 0.00 0.00 2.82
740 882 0.555769 ACCACACCTTCCACCAATGT 59.444 50.000 0.00 0.00 0.00 2.71
741 883 0.961019 CCACACCTTCCACCAATGTG 59.039 55.000 0.00 0.00 42.39 3.21
742 884 1.478471 CCACACCTTCCACCAATGTGA 60.478 52.381 4.30 0.00 45.76 3.58
743 885 2.517959 CACACCTTCCACCAATGTGAT 58.482 47.619 0.00 0.00 45.76 3.06
744 886 2.892852 CACACCTTCCACCAATGTGATT 59.107 45.455 0.00 0.00 45.76 2.57
745 887 3.321682 CACACCTTCCACCAATGTGATTT 59.678 43.478 0.00 0.00 45.76 2.17
746 888 3.573967 ACACCTTCCACCAATGTGATTTC 59.426 43.478 0.00 0.00 45.76 2.17
747 889 2.819608 ACCTTCCACCAATGTGATTTCG 59.180 45.455 0.00 0.00 45.76 3.46
748 890 2.415893 CCTTCCACCAATGTGATTTCGC 60.416 50.000 0.00 0.00 45.76 4.70
749 891 0.801872 TCCACCAATGTGATTTCGCG 59.198 50.000 0.00 0.00 45.76 5.87
750 892 0.801872 CCACCAATGTGATTTCGCGA 59.198 50.000 3.71 3.71 45.76 5.87
751 893 1.401552 CCACCAATGTGATTTCGCGAT 59.598 47.619 10.88 0.00 45.76 4.58
752 894 2.443387 CACCAATGTGATTTCGCGATG 58.557 47.619 10.88 1.69 45.76 3.84
753 895 2.095692 CACCAATGTGATTTCGCGATGA 59.904 45.455 10.88 1.56 45.76 2.92
754 896 2.746904 ACCAATGTGATTTCGCGATGAA 59.253 40.909 10.88 1.65 33.85 2.57
755 897 4.905750 CACCAATGTGATTTCGCGATGAAA 60.906 41.667 10.88 0.72 45.76 2.69
765 907 2.764768 TCGCGATGAAATTTTACGTGC 58.235 42.857 3.71 6.92 35.07 5.34
766 908 2.157863 TCGCGATGAAATTTTACGTGCA 59.842 40.909 3.71 0.00 35.07 4.57
767 909 2.272700 CGCGATGAAATTTTACGTGCAC 59.727 45.455 6.82 6.82 0.00 4.57
768 910 3.230355 GCGATGAAATTTTACGTGCACA 58.770 40.909 18.64 0.00 0.00 4.57
769 911 3.666334 GCGATGAAATTTTACGTGCACAA 59.334 39.130 18.64 3.45 0.00 3.33
770 912 4.431086 GCGATGAAATTTTACGTGCACAAC 60.431 41.667 18.64 0.00 0.00 3.32
771 913 4.672862 CGATGAAATTTTACGTGCACAACA 59.327 37.500 18.64 0.00 0.00 3.33
772 914 5.172232 CGATGAAATTTTACGTGCACAACAA 59.828 36.000 18.64 4.10 0.00 2.83
773 915 6.291322 CGATGAAATTTTACGTGCACAACAAA 60.291 34.615 18.64 11.77 0.00 2.83
774 916 6.893958 TGAAATTTTACGTGCACAACAAAT 57.106 29.167 18.64 13.48 0.00 2.32
775 917 7.987268 TGAAATTTTACGTGCACAACAAATA 57.013 28.000 18.64 0.79 0.00 1.40
776 918 8.581057 TGAAATTTTACGTGCACAACAAATAT 57.419 26.923 18.64 3.08 0.00 1.28
777 919 9.035607 TGAAATTTTACGTGCACAACAAATATT 57.964 25.926 18.64 12.39 0.00 1.28
778 920 9.856803 GAAATTTTACGTGCACAACAAATATTT 57.143 25.926 18.64 15.25 0.00 1.40
779 921 9.643652 AAATTTTACGTGCACAACAAATATTTG 57.356 25.926 23.60 23.60 43.62 2.32
855 997 7.883391 TTTTATTTTACTGTTCACACCAGGA 57.117 32.000 0.00 0.00 34.16 3.86
856 998 7.504924 TTTATTTTACTGTTCACACCAGGAG 57.495 36.000 0.00 0.00 34.16 3.69
857 999 2.543777 TTACTGTTCACACCAGGAGC 57.456 50.000 0.00 0.00 34.16 4.70
858 1000 1.419381 TACTGTTCACACCAGGAGCA 58.581 50.000 0.00 0.00 34.16 4.26
859 1001 0.767375 ACTGTTCACACCAGGAGCAT 59.233 50.000 0.00 0.00 34.16 3.79
860 1002 1.143684 ACTGTTCACACCAGGAGCATT 59.856 47.619 0.00 0.00 34.16 3.56
861 1003 2.233271 CTGTTCACACCAGGAGCATTT 58.767 47.619 0.00 0.00 0.00 2.32
862 1004 1.955778 TGTTCACACCAGGAGCATTTG 59.044 47.619 0.00 0.00 0.00 2.32
863 1005 0.961019 TTCACACCAGGAGCATTTGC 59.039 50.000 0.00 0.00 42.49 3.68
873 1015 4.102113 GCATTTGCTCCTGGGTGT 57.898 55.556 0.00 0.00 38.21 4.16
874 1016 3.264574 GCATTTGCTCCTGGGTGTA 57.735 52.632 0.00 0.00 38.21 2.90
875 1017 1.098050 GCATTTGCTCCTGGGTGTAG 58.902 55.000 0.00 0.00 38.21 2.74
876 1018 1.340017 GCATTTGCTCCTGGGTGTAGA 60.340 52.381 0.00 0.00 38.21 2.59
877 1019 2.879756 GCATTTGCTCCTGGGTGTAGAA 60.880 50.000 0.00 0.00 38.21 2.10
878 1020 3.420893 CATTTGCTCCTGGGTGTAGAAA 58.579 45.455 0.00 0.00 0.00 2.52
879 1021 2.561478 TTGCTCCTGGGTGTAGAAAC 57.439 50.000 0.00 0.00 0.00 2.78
880 1022 1.729586 TGCTCCTGGGTGTAGAAACT 58.270 50.000 0.00 0.00 0.00 2.66
881 1023 2.054799 TGCTCCTGGGTGTAGAAACTT 58.945 47.619 0.00 0.00 0.00 2.66
882 1024 2.038557 TGCTCCTGGGTGTAGAAACTTC 59.961 50.000 0.00 0.00 0.00 3.01
883 1025 2.038557 GCTCCTGGGTGTAGAAACTTCA 59.961 50.000 0.00 0.00 0.00 3.02
884 1026 3.665190 CTCCTGGGTGTAGAAACTTCAC 58.335 50.000 0.00 0.00 32.31 3.18
885 1027 3.314693 TCCTGGGTGTAGAAACTTCACT 58.685 45.455 0.00 0.00 33.36 3.41
886 1028 3.714798 TCCTGGGTGTAGAAACTTCACTT 59.285 43.478 0.00 0.00 33.36 3.16
887 1029 4.065789 CCTGGGTGTAGAAACTTCACTTC 58.934 47.826 0.00 0.00 33.36 3.01
918 1060 3.562393 CCTCTCAACTCTAGTGTCCTCCA 60.562 52.174 0.00 0.00 0.00 3.86
924 1066 1.101635 TCTAGTGTCCTCCATCGCCG 61.102 60.000 0.00 0.00 0.00 6.46
990 1138 2.979197 CTCCAGCGTCGACCGAAGT 61.979 63.158 10.58 0.00 39.56 3.01
1424 1587 2.481185 CTGCGCTCTACTACTAGCCTAC 59.519 54.545 9.73 0.00 35.22 3.18
1427 1590 2.038820 CGCTCTACTACTAGCCTACCCT 59.961 54.545 0.00 0.00 35.22 4.34
1428 1591 3.260380 CGCTCTACTACTAGCCTACCCTA 59.740 52.174 0.00 0.00 35.22 3.53
1429 1592 4.621274 CGCTCTACTACTAGCCTACCCTAG 60.621 54.167 0.00 0.00 40.47 3.02
1431 1594 2.976068 ACTACTAGCCTACCCTAGCC 57.024 55.000 0.00 0.00 38.68 3.93
1432 1595 1.428525 ACTACTAGCCTACCCTAGCCC 59.571 57.143 0.00 0.00 38.68 5.19
1433 1596 1.711942 CTACTAGCCTACCCTAGCCCT 59.288 57.143 0.00 0.00 38.68 5.19
1434 1597 0.942721 ACTAGCCTACCCTAGCCCTT 59.057 55.000 0.00 0.00 38.68 3.95
1523 1764 1.202533 CCCCTGCGTGGAGTACATAAG 60.203 57.143 0.00 0.00 38.35 1.73
1524 1765 1.202533 CCCTGCGTGGAGTACATAAGG 60.203 57.143 0.00 0.00 38.35 2.69
1525 1766 1.480954 CCTGCGTGGAGTACATAAGGT 59.519 52.381 0.00 0.00 38.35 3.50
1527 1768 2.165641 CTGCGTGGAGTACATAAGGTCA 59.834 50.000 0.00 0.00 0.00 4.02
1528 1769 2.094390 TGCGTGGAGTACATAAGGTCAC 60.094 50.000 0.00 0.00 0.00 3.67
1530 1771 3.508762 CGTGGAGTACATAAGGTCACAC 58.491 50.000 0.00 0.00 0.00 3.82
1549 1793 1.914764 GTACGGGGTTGGTGGAGGA 60.915 63.158 0.00 0.00 0.00 3.71
1592 1863 0.179018 ACCTGCTGTCTTGTGGGAAC 60.179 55.000 0.00 0.00 0.00 3.62
1606 1877 2.694109 GTGGGAACTAGGGCTGTAGTAG 59.306 54.545 0.00 0.00 32.69 2.57
1699 2021 4.383552 GCAATGGAGCTTCTTCTTCCTCTA 60.384 45.833 0.00 0.00 0.00 2.43
1799 2164 6.406692 TCCAAGATCTGCTGGTATACTAAC 57.593 41.667 12.27 0.00 0.00 2.34
1975 2374 5.820947 GTCTGGGCTTATTAAAAATCTCGGA 59.179 40.000 0.00 0.00 0.00 4.55
2027 2426 8.908903 ACTGCATATAGACTTATAGAGGCATAC 58.091 37.037 0.00 0.00 35.01 2.39
2054 2453 5.416083 CGTGTGTATAGGAATTTCCAGACA 58.584 41.667 17.57 13.86 39.61 3.41
2081 2480 6.707440 TTTCAAACAATCTTGCTAAGTCCA 57.293 33.333 0.00 0.00 0.00 4.02
2124 2523 1.132453 TCTCAGTCGGTGCTGTATTCG 59.868 52.381 0.00 0.00 37.70 3.34
2136 2535 5.342525 GGTGCTGTATTCGTTAGATCATACG 59.657 44.000 11.93 11.93 39.03 3.06
2153 2552 1.808411 ACGTTGAGATCCGTGCAATT 58.192 45.000 0.00 0.00 35.69 2.32
2238 2641 4.403113 AGCTAAGTTGACTAAGACCTAGCC 59.597 45.833 6.64 0.00 32.72 3.93
2239 2642 4.159879 GCTAAGTTGACTAAGACCTAGCCA 59.840 45.833 0.00 0.00 0.00 4.75
2240 2643 4.538746 AAGTTGACTAAGACCTAGCCAC 57.461 45.455 0.00 0.00 0.00 5.01
2241 2644 3.507411 AGTTGACTAAGACCTAGCCACA 58.493 45.455 0.00 0.00 0.00 4.17
2242 2645 3.258622 AGTTGACTAAGACCTAGCCACAC 59.741 47.826 0.00 0.00 0.00 3.82
2243 2646 2.176889 TGACTAAGACCTAGCCACACC 58.823 52.381 0.00 0.00 0.00 4.16
2244 2647 1.481363 GACTAAGACCTAGCCACACCC 59.519 57.143 0.00 0.00 0.00 4.61
2245 2648 1.078989 ACTAAGACCTAGCCACACCCT 59.921 52.381 0.00 0.00 0.00 4.34
2246 2649 2.188817 CTAAGACCTAGCCACACCCTT 58.811 52.381 0.00 0.00 0.00 3.95
2247 2650 1.446016 AAGACCTAGCCACACCCTTT 58.554 50.000 0.00 0.00 0.00 3.11
2248 2651 1.446016 AGACCTAGCCACACCCTTTT 58.554 50.000 0.00 0.00 0.00 2.27
2249 2652 1.780919 AGACCTAGCCACACCCTTTTT 59.219 47.619 0.00 0.00 0.00 1.94
2250 2653 2.160205 GACCTAGCCACACCCTTTTTC 58.840 52.381 0.00 0.00 0.00 2.29
2251 2654 1.497286 ACCTAGCCACACCCTTTTTCA 59.503 47.619 0.00 0.00 0.00 2.69
2252 2655 2.091555 ACCTAGCCACACCCTTTTTCAA 60.092 45.455 0.00 0.00 0.00 2.69
2253 2656 2.962421 CCTAGCCACACCCTTTTTCAAA 59.038 45.455 0.00 0.00 0.00 2.69
2254 2657 3.386402 CCTAGCCACACCCTTTTTCAAAA 59.614 43.478 0.00 0.00 0.00 2.44
2255 2658 3.260475 AGCCACACCCTTTTTCAAAAC 57.740 42.857 0.00 0.00 0.00 2.43
2256 2659 2.569404 AGCCACACCCTTTTTCAAAACA 59.431 40.909 0.00 0.00 0.00 2.83
2257 2660 2.935849 GCCACACCCTTTTTCAAAACAG 59.064 45.455 0.00 0.00 0.00 3.16
2258 2661 3.530535 CCACACCCTTTTTCAAAACAGG 58.469 45.455 1.42 1.42 35.98 4.00
2259 2662 3.196685 CCACACCCTTTTTCAAAACAGGA 59.803 43.478 8.86 0.00 37.94 3.86
2260 2663 4.432712 CACACCCTTTTTCAAAACAGGAG 58.567 43.478 8.86 4.57 37.94 3.69
2261 2664 3.118775 ACACCCTTTTTCAAAACAGGAGC 60.119 43.478 8.86 0.00 37.94 4.70
2262 2665 3.103742 ACCCTTTTTCAAAACAGGAGCA 58.896 40.909 8.86 0.00 37.94 4.26
2263 2666 3.517500 ACCCTTTTTCAAAACAGGAGCAA 59.482 39.130 8.86 0.00 37.94 3.91
2264 2667 4.019771 ACCCTTTTTCAAAACAGGAGCAAA 60.020 37.500 8.86 0.00 37.94 3.68
2265 2668 4.940654 CCCTTTTTCAAAACAGGAGCAAAA 59.059 37.500 8.86 0.00 37.94 2.44
2266 2669 5.589855 CCCTTTTTCAAAACAGGAGCAAAAT 59.410 36.000 8.86 0.00 37.94 1.82
2267 2670 6.765512 CCCTTTTTCAAAACAGGAGCAAAATA 59.234 34.615 8.86 0.00 37.94 1.40
2268 2671 7.445096 CCCTTTTTCAAAACAGGAGCAAAATAT 59.555 33.333 8.86 0.00 37.94 1.28
2269 2672 8.284693 CCTTTTTCAAAACAGGAGCAAAATATG 58.715 33.333 2.13 0.00 37.94 1.78
2270 2673 8.729805 TTTTTCAAAACAGGAGCAAAATATGT 57.270 26.923 0.00 0.00 0.00 2.29
2271 2674 7.712264 TTTCAAAACAGGAGCAAAATATGTG 57.288 32.000 0.00 0.00 0.00 3.21
2272 2675 6.403866 TCAAAACAGGAGCAAAATATGTGT 57.596 33.333 0.00 0.00 0.00 3.72
2273 2676 6.446318 TCAAAACAGGAGCAAAATATGTGTC 58.554 36.000 0.00 0.00 0.00 3.67
2274 2677 6.265196 TCAAAACAGGAGCAAAATATGTGTCT 59.735 34.615 0.00 0.00 0.00 3.41
2275 2678 5.886960 AACAGGAGCAAAATATGTGTCTC 57.113 39.130 0.00 0.00 0.00 3.36
2276 2679 3.935203 ACAGGAGCAAAATATGTGTCTCG 59.065 43.478 0.00 0.00 0.00 4.04
2277 2680 3.935203 CAGGAGCAAAATATGTGTCTCGT 59.065 43.478 0.00 0.00 0.00 4.18
2278 2681 4.033358 CAGGAGCAAAATATGTGTCTCGTC 59.967 45.833 0.00 0.00 0.00 4.20
2279 2682 3.309954 GGAGCAAAATATGTGTCTCGTCC 59.690 47.826 0.00 0.00 0.00 4.79
2280 2683 3.932710 GAGCAAAATATGTGTCTCGTCCA 59.067 43.478 0.00 0.00 0.00 4.02
2281 2684 4.517285 AGCAAAATATGTGTCTCGTCCAT 58.483 39.130 0.00 0.00 0.00 3.41
2282 2685 4.943705 AGCAAAATATGTGTCTCGTCCATT 59.056 37.500 0.00 0.00 0.00 3.16
2283 2686 6.112734 AGCAAAATATGTGTCTCGTCCATTA 58.887 36.000 0.00 0.00 0.00 1.90
2284 2687 6.597672 AGCAAAATATGTGTCTCGTCCATTAA 59.402 34.615 0.00 0.00 0.00 1.40
2285 2688 7.283127 AGCAAAATATGTGTCTCGTCCATTAAT 59.717 33.333 0.00 0.00 0.00 1.40
2286 2689 7.915397 GCAAAATATGTGTCTCGTCCATTAATT 59.085 33.333 0.00 0.00 0.00 1.40
2290 2693 6.604735 ATGTGTCTCGTCCATTAATTAAGC 57.395 37.500 3.94 0.00 0.00 3.09
2291 2694 5.483811 TGTGTCTCGTCCATTAATTAAGCA 58.516 37.500 3.94 0.00 0.00 3.91
2292 2695 5.935206 TGTGTCTCGTCCATTAATTAAGCAA 59.065 36.000 3.94 0.00 0.00 3.91
2293 2696 6.428465 TGTGTCTCGTCCATTAATTAAGCAAA 59.572 34.615 3.94 0.00 0.00 3.68
2294 2697 7.041030 TGTGTCTCGTCCATTAATTAAGCAAAA 60.041 33.333 3.94 0.00 0.00 2.44
2295 2698 7.270579 GTGTCTCGTCCATTAATTAAGCAAAAC 59.729 37.037 3.94 0.00 0.00 2.43
2296 2699 7.041030 TGTCTCGTCCATTAATTAAGCAAAACA 60.041 33.333 3.94 0.00 0.00 2.83
2297 2700 7.481798 GTCTCGTCCATTAATTAAGCAAAACAG 59.518 37.037 3.94 0.00 0.00 3.16
2298 2701 7.389330 TCTCGTCCATTAATTAAGCAAAACAGA 59.611 33.333 3.94 0.00 0.00 3.41
2299 2702 7.877003 TCGTCCATTAATTAAGCAAAACAGAA 58.123 30.769 3.94 0.00 0.00 3.02
2300 2703 8.519526 TCGTCCATTAATTAAGCAAAACAGAAT 58.480 29.630 3.94 0.00 0.00 2.40
2301 2704 9.139174 CGTCCATTAATTAAGCAAAACAGAATT 57.861 29.630 3.94 0.00 0.00 2.17
2303 2706 9.995003 TCCATTAATTAAGCAAAACAGAATTGT 57.005 25.926 3.94 0.00 39.87 2.71
2308 2711 6.826893 TTAAGCAAAACAGAATTGTCAAGC 57.173 33.333 0.00 0.00 36.23 4.01
2309 2712 4.660789 AGCAAAACAGAATTGTCAAGCT 57.339 36.364 0.00 0.00 36.23 3.74
2310 2713 5.772825 AGCAAAACAGAATTGTCAAGCTA 57.227 34.783 0.00 0.00 36.33 3.32
2311 2714 6.147864 AGCAAAACAGAATTGTCAAGCTAA 57.852 33.333 0.00 0.00 36.33 3.09
2312 2715 6.752168 AGCAAAACAGAATTGTCAAGCTAAT 58.248 32.000 0.00 0.00 36.33 1.73
2313 2716 7.212274 AGCAAAACAGAATTGTCAAGCTAATT 58.788 30.769 0.00 0.00 36.33 1.40
2314 2717 8.359642 AGCAAAACAGAATTGTCAAGCTAATTA 58.640 29.630 0.00 0.00 36.33 1.40
2315 2718 8.977505 GCAAAACAGAATTGTCAAGCTAATTAA 58.022 29.630 0.00 0.00 36.23 1.40
2342 2745 6.787085 AAAATTAGTTGAGAACTCAGTCCG 57.213 37.500 4.72 0.00 41.77 4.79
2343 2746 5.470047 AATTAGTTGAGAACTCAGTCCGT 57.530 39.130 4.72 0.00 41.77 4.69
2344 2747 4.931661 TTAGTTGAGAACTCAGTCCGTT 57.068 40.909 4.72 0.00 41.77 4.44
2345 2748 3.099267 AGTTGAGAACTCAGTCCGTTG 57.901 47.619 4.72 0.00 41.13 4.10
2346 2749 2.135933 GTTGAGAACTCAGTCCGTTGG 58.864 52.381 4.72 0.00 41.13 3.77
2347 2750 1.699730 TGAGAACTCAGTCCGTTGGA 58.300 50.000 0.00 0.00 34.14 3.53
2348 2751 6.528168 AGTTGAGAACTCAGTCCGTTGGAC 62.528 50.000 7.92 7.92 44.99 4.02
2356 2759 2.737830 TCCGTTGGACATCGCACA 59.262 55.556 0.00 0.00 0.00 4.57
2357 2760 1.666553 TCCGTTGGACATCGCACAC 60.667 57.895 0.00 0.00 0.00 3.82
2358 2761 1.958715 CCGTTGGACATCGCACACA 60.959 57.895 0.00 0.00 0.00 3.72
2359 2762 1.492873 CGTTGGACATCGCACACAG 59.507 57.895 0.00 0.00 0.00 3.66
2360 2763 1.868997 GTTGGACATCGCACACAGG 59.131 57.895 0.00 0.00 0.00 4.00
2361 2764 0.602638 GTTGGACATCGCACACAGGA 60.603 55.000 0.00 0.00 0.00 3.86
2362 2765 0.324614 TTGGACATCGCACACAGGAT 59.675 50.000 0.00 0.00 0.00 3.24
2363 2766 1.190643 TGGACATCGCACACAGGATA 58.809 50.000 0.00 0.00 0.00 2.59
2364 2767 1.762370 TGGACATCGCACACAGGATAT 59.238 47.619 0.00 0.00 0.00 1.63
2365 2768 2.170397 TGGACATCGCACACAGGATATT 59.830 45.455 0.00 0.00 0.00 1.28
2366 2769 2.802816 GGACATCGCACACAGGATATTC 59.197 50.000 0.00 0.00 0.00 1.75
2367 2770 2.802816 GACATCGCACACAGGATATTCC 59.197 50.000 0.00 0.00 36.58 3.01
2368 2771 2.170397 ACATCGCACACAGGATATTCCA 59.830 45.455 0.00 0.00 39.61 3.53
2369 2772 2.309528 TCGCACACAGGATATTCCAC 57.690 50.000 0.00 0.00 39.61 4.02
2370 2773 1.552792 TCGCACACAGGATATTCCACA 59.447 47.619 0.00 0.00 39.61 4.17
2371 2774 2.170397 TCGCACACAGGATATTCCACAT 59.830 45.455 0.00 0.00 39.61 3.21
2372 2775 3.386402 TCGCACACAGGATATTCCACATA 59.614 43.478 0.00 0.00 39.61 2.29
2373 2776 3.494626 CGCACACAGGATATTCCACATAC 59.505 47.826 0.00 0.00 39.61 2.39
2374 2777 4.708177 GCACACAGGATATTCCACATACT 58.292 43.478 0.00 0.00 39.61 2.12
2375 2778 4.752101 GCACACAGGATATTCCACATACTC 59.248 45.833 0.00 0.00 39.61 2.59
2376 2779 5.453903 GCACACAGGATATTCCACATACTCT 60.454 44.000 0.00 0.00 39.61 3.24
2377 2780 5.987953 CACACAGGATATTCCACATACTCTG 59.012 44.000 0.00 0.00 39.61 3.35
2378 2781 5.663106 ACACAGGATATTCCACATACTCTGT 59.337 40.000 0.00 0.00 39.61 3.41
2393 2796 3.848272 CTCTGTGAAGAGAGTCTGGTC 57.152 52.381 0.00 0.00 38.13 4.02
2394 2797 2.155279 TCTGTGAAGAGAGTCTGGTCG 58.845 52.381 0.00 0.00 0.00 4.79
2395 2798 2.155279 CTGTGAAGAGAGTCTGGTCGA 58.845 52.381 0.00 0.00 0.00 4.20
2396 2799 2.155279 TGTGAAGAGAGTCTGGTCGAG 58.845 52.381 0.00 0.00 0.00 4.04
2397 2800 2.224548 TGTGAAGAGAGTCTGGTCGAGA 60.225 50.000 0.00 0.00 0.00 4.04
2398 2801 3.013921 GTGAAGAGAGTCTGGTCGAGAT 58.986 50.000 0.00 0.00 31.63 2.75
2399 2802 4.193090 GTGAAGAGAGTCTGGTCGAGATA 58.807 47.826 0.00 0.00 31.63 1.98
2400 2803 4.272504 GTGAAGAGAGTCTGGTCGAGATAG 59.727 50.000 0.00 0.00 31.63 2.08
2401 2804 2.846193 AGAGAGTCTGGTCGAGATAGC 58.154 52.381 0.00 0.00 31.63 2.97
2402 2805 2.171659 AGAGAGTCTGGTCGAGATAGCA 59.828 50.000 0.00 0.00 31.63 3.49
2403 2806 2.289547 GAGAGTCTGGTCGAGATAGCAC 59.710 54.545 0.00 0.00 31.63 4.40
2404 2807 2.017782 GAGTCTGGTCGAGATAGCACA 58.982 52.381 0.00 0.00 31.63 4.57
2405 2808 2.621055 GAGTCTGGTCGAGATAGCACAT 59.379 50.000 0.00 0.00 31.63 3.21
2406 2809 3.815962 GAGTCTGGTCGAGATAGCACATA 59.184 47.826 0.00 0.00 31.63 2.29
2407 2810 3.818210 AGTCTGGTCGAGATAGCACATAG 59.182 47.826 0.00 0.00 31.63 2.23
2408 2811 3.057876 GTCTGGTCGAGATAGCACATAGG 60.058 52.174 0.00 0.00 31.63 2.57
2409 2812 1.613925 TGGTCGAGATAGCACATAGGC 59.386 52.381 0.00 0.00 0.00 3.93
2410 2813 1.613925 GGTCGAGATAGCACATAGGCA 59.386 52.381 0.00 0.00 35.83 4.75
2411 2814 2.608261 GGTCGAGATAGCACATAGGCAC 60.608 54.545 0.00 0.00 35.83 5.01
2412 2815 1.613925 TCGAGATAGCACATAGGCACC 59.386 52.381 0.00 0.00 35.83 5.01
2413 2816 1.341209 CGAGATAGCACATAGGCACCA 59.659 52.381 0.00 0.00 35.83 4.17
2414 2817 2.028658 CGAGATAGCACATAGGCACCAT 60.029 50.000 0.00 0.00 35.83 3.55
2415 2818 3.594134 GAGATAGCACATAGGCACCATC 58.406 50.000 0.00 0.00 35.83 3.51
2416 2819 2.028658 AGATAGCACATAGGCACCATCG 60.029 50.000 0.00 0.00 35.83 3.84
2417 2820 1.119684 TAGCACATAGGCACCATCGT 58.880 50.000 0.00 0.00 35.83 3.73
2418 2821 0.179073 AGCACATAGGCACCATCGTC 60.179 55.000 0.00 0.00 35.83 4.20
2419 2822 0.461870 GCACATAGGCACCATCGTCA 60.462 55.000 0.00 0.00 0.00 4.35
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 6.317893 ACCCCATAACTAAACTCGCAATTTAG 59.682 38.462 8.91 8.91 42.76 1.85
5 6 6.094325 CACCCCATAACTAAACTCGCAATTTA 59.906 38.462 0.00 0.00 0.00 1.40
6 7 5.014202 ACCCCATAACTAAACTCGCAATTT 58.986 37.500 0.00 0.00 0.00 1.82
7 8 4.398044 CACCCCATAACTAAACTCGCAATT 59.602 41.667 0.00 0.00 0.00 2.32
8 9 3.945285 CACCCCATAACTAAACTCGCAAT 59.055 43.478 0.00 0.00 0.00 3.56
9 10 3.340034 CACCCCATAACTAAACTCGCAA 58.660 45.455 0.00 0.00 0.00 4.85
10 11 2.355310 CCACCCCATAACTAAACTCGCA 60.355 50.000 0.00 0.00 0.00 5.10
11 12 2.285977 CCACCCCATAACTAAACTCGC 58.714 52.381 0.00 0.00 0.00 5.03
12 13 3.622166 ACCACCCCATAACTAAACTCG 57.378 47.619 0.00 0.00 0.00 4.18
13 14 5.046087 ACAGTACCACCCCATAACTAAACTC 60.046 44.000 0.00 0.00 0.00 3.01
14 15 4.848086 ACAGTACCACCCCATAACTAAACT 59.152 41.667 0.00 0.00 0.00 2.66
15 16 4.939439 CACAGTACCACCCCATAACTAAAC 59.061 45.833 0.00 0.00 0.00 2.01
16 17 4.019141 CCACAGTACCACCCCATAACTAAA 60.019 45.833 0.00 0.00 0.00 1.85
17 18 3.520317 CCACAGTACCACCCCATAACTAA 59.480 47.826 0.00 0.00 0.00 2.24
18 19 3.109151 CCACAGTACCACCCCATAACTA 58.891 50.000 0.00 0.00 0.00 2.24
19 20 1.913419 CCACAGTACCACCCCATAACT 59.087 52.381 0.00 0.00 0.00 2.24
20 21 1.631898 ACCACAGTACCACCCCATAAC 59.368 52.381 0.00 0.00 0.00 1.89
21 22 2.047769 ACCACAGTACCACCCCATAA 57.952 50.000 0.00 0.00 0.00 1.90
22 23 2.839425 GTTACCACAGTACCACCCCATA 59.161 50.000 0.00 0.00 0.00 2.74
23 24 1.631898 GTTACCACAGTACCACCCCAT 59.368 52.381 0.00 0.00 0.00 4.00
24 25 1.058284 GTTACCACAGTACCACCCCA 58.942 55.000 0.00 0.00 0.00 4.96
25 26 1.002773 CAGTTACCACAGTACCACCCC 59.997 57.143 0.00 0.00 0.00 4.95
26 27 1.002773 CCAGTTACCACAGTACCACCC 59.997 57.143 0.00 0.00 0.00 4.61
27 28 1.695788 ACCAGTTACCACAGTACCACC 59.304 52.381 0.00 0.00 0.00 4.61
28 29 4.605640 TTACCAGTTACCACAGTACCAC 57.394 45.455 0.00 0.00 0.00 4.16
29 30 4.900652 TCTTTACCAGTTACCACAGTACCA 59.099 41.667 0.00 0.00 0.00 3.25
30 31 5.473066 TCTTTACCAGTTACCACAGTACC 57.527 43.478 0.00 0.00 0.00 3.34
31 32 6.592994 GGATTCTTTACCAGTTACCACAGTAC 59.407 42.308 0.00 0.00 0.00 2.73
32 33 6.270463 TGGATTCTTTACCAGTTACCACAGTA 59.730 38.462 0.00 0.00 0.00 2.74
33 34 5.072600 TGGATTCTTTACCAGTTACCACAGT 59.927 40.000 0.00 0.00 0.00 3.55
34 35 5.411669 GTGGATTCTTTACCAGTTACCACAG 59.588 44.000 0.00 0.00 42.90 3.66
35 36 5.310451 GTGGATTCTTTACCAGTTACCACA 58.690 41.667 0.00 0.00 42.90 4.17
36 37 4.698780 GGTGGATTCTTTACCAGTTACCAC 59.301 45.833 0.00 0.00 42.73 4.16
37 38 4.351407 TGGTGGATTCTTTACCAGTTACCA 59.649 41.667 0.00 0.00 39.43 3.25
38 39 4.913784 TGGTGGATTCTTTACCAGTTACC 58.086 43.478 0.00 0.00 39.43 2.85
39 40 6.489022 ACTTTGGTGGATTCTTTACCAGTTAC 59.511 38.462 0.00 0.00 44.56 2.50
40 41 6.607019 ACTTTGGTGGATTCTTTACCAGTTA 58.393 36.000 0.00 0.00 44.56 2.24
41 42 5.454966 ACTTTGGTGGATTCTTTACCAGTT 58.545 37.500 0.00 0.00 44.56 3.16
42 43 5.061721 ACTTTGGTGGATTCTTTACCAGT 57.938 39.130 0.00 0.00 44.56 4.00
43 44 5.070001 TGACTTTGGTGGATTCTTTACCAG 58.930 41.667 0.00 0.00 44.56 4.00
44 45 5.055265 TGACTTTGGTGGATTCTTTACCA 57.945 39.130 0.00 0.00 42.40 3.25
45 46 5.710099 TCATGACTTTGGTGGATTCTTTACC 59.290 40.000 0.00 0.00 35.05 2.85
46 47 6.206634 TGTCATGACTTTGGTGGATTCTTTAC 59.793 38.462 25.55 0.00 0.00 2.01
47 48 6.303054 TGTCATGACTTTGGTGGATTCTTTA 58.697 36.000 25.55 0.00 0.00 1.85
48 49 5.139727 TGTCATGACTTTGGTGGATTCTTT 58.860 37.500 25.55 0.00 0.00 2.52
49 50 4.728772 TGTCATGACTTTGGTGGATTCTT 58.271 39.130 25.55 0.00 0.00 2.52
50 51 4.371624 TGTCATGACTTTGGTGGATTCT 57.628 40.909 25.55 0.00 0.00 2.40
51 52 5.452078 TTTGTCATGACTTTGGTGGATTC 57.548 39.130 25.55 0.00 0.00 2.52
52 53 6.947733 TCTATTTGTCATGACTTTGGTGGATT 59.052 34.615 25.55 3.09 0.00 3.01
53 54 6.484288 TCTATTTGTCATGACTTTGGTGGAT 58.516 36.000 25.55 10.47 0.00 3.41
54 55 5.875224 TCTATTTGTCATGACTTTGGTGGA 58.125 37.500 25.55 11.88 0.00 4.02
55 56 6.573664 TTCTATTTGTCATGACTTTGGTGG 57.426 37.500 25.55 10.00 0.00 4.61
56 57 8.950210 AGTATTCTATTTGTCATGACTTTGGTG 58.050 33.333 25.55 11.92 0.00 4.17
57 58 8.950210 CAGTATTCTATTTGTCATGACTTTGGT 58.050 33.333 25.55 10.39 0.00 3.67
58 59 7.912250 GCAGTATTCTATTTGTCATGACTTTGG 59.088 37.037 25.55 12.50 0.00 3.28
59 60 8.671921 AGCAGTATTCTATTTGTCATGACTTTG 58.328 33.333 25.55 11.90 0.00 2.77
60 61 8.798859 AGCAGTATTCTATTTGTCATGACTTT 57.201 30.769 25.55 12.98 0.00 2.66
61 62 9.319143 GTAGCAGTATTCTATTTGTCATGACTT 57.681 33.333 25.55 13.30 0.00 3.01
62 63 8.700051 AGTAGCAGTATTCTATTTGTCATGACT 58.300 33.333 25.55 9.24 0.00 3.41
63 64 8.759641 CAGTAGCAGTATTCTATTTGTCATGAC 58.240 37.037 19.27 19.27 0.00 3.06
64 65 8.478066 ACAGTAGCAGTATTCTATTTGTCATGA 58.522 33.333 0.00 0.00 0.00 3.07
65 66 8.654230 ACAGTAGCAGTATTCTATTTGTCATG 57.346 34.615 0.00 0.00 0.00 3.07
66 67 9.751542 GTACAGTAGCAGTATTCTATTTGTCAT 57.248 33.333 0.00 0.00 0.00 3.06
67 68 8.195436 GGTACAGTAGCAGTATTCTATTTGTCA 58.805 37.037 4.82 0.00 0.00 3.58
68 69 7.652507 GGGTACAGTAGCAGTATTCTATTTGTC 59.347 40.741 11.85 0.00 0.00 3.18
69 70 7.344871 AGGGTACAGTAGCAGTATTCTATTTGT 59.655 37.037 11.85 0.00 0.00 2.83
70 71 7.727181 AGGGTACAGTAGCAGTATTCTATTTG 58.273 38.462 11.85 0.00 0.00 2.32
71 72 7.916077 AGGGTACAGTAGCAGTATTCTATTT 57.084 36.000 11.85 0.00 0.00 1.40
72 73 9.430399 TTTAGGGTACAGTAGCAGTATTCTATT 57.570 33.333 11.85 0.00 0.00 1.73
73 74 9.430399 TTTTAGGGTACAGTAGCAGTATTCTAT 57.570 33.333 11.85 0.00 0.00 1.98
74 75 8.827832 TTTTAGGGTACAGTAGCAGTATTCTA 57.172 34.615 11.85 0.46 0.00 2.10
75 76 7.729124 TTTTAGGGTACAGTAGCAGTATTCT 57.271 36.000 11.85 1.35 0.00 2.40
130 131 7.299246 TGTATTATACTCCCTCTGTAAAGGC 57.701 40.000 3.92 0.00 34.88 4.35
202 209 8.474006 ACATTGGTTAAAGTTGACAAGAAAAC 57.526 30.769 0.00 0.00 0.00 2.43
278 410 4.729227 TCCTCATTTTAAAATTCGCCCC 57.271 40.909 10.77 0.00 0.00 5.80
282 414 7.758076 GGGGTTACTTCCTCATTTTAAAATTCG 59.242 37.037 10.77 5.20 0.00 3.34
371 507 7.164230 TGCCATTATTTTTCTCGGTTTGTAT 57.836 32.000 0.00 0.00 0.00 2.29
397 535 1.152756 GTGGGTTGCACAGGTCCTT 60.153 57.895 0.00 0.00 0.00 3.36
432 573 2.295349 CCACGGTGGCTCGTTATATAGT 59.705 50.000 15.29 0.00 41.86 2.12
471 613 6.574350 AGAATGGTACTTTCGAGATACAAGG 58.426 40.000 0.00 0.00 0.00 3.61
472 614 9.582431 TTTAGAATGGTACTTTCGAGATACAAG 57.418 33.333 0.00 0.00 0.00 3.16
473 615 9.582431 CTTTAGAATGGTACTTTCGAGATACAA 57.418 33.333 0.00 0.00 0.00 2.41
474 616 7.705325 GCTTTAGAATGGTACTTTCGAGATACA 59.295 37.037 0.00 0.00 0.00 2.29
475 617 7.169476 GGCTTTAGAATGGTACTTTCGAGATAC 59.831 40.741 0.00 0.00 0.00 2.24
476 618 7.147794 TGGCTTTAGAATGGTACTTTCGAGATA 60.148 37.037 0.00 0.00 0.00 1.98
477 619 6.049790 GGCTTTAGAATGGTACTTTCGAGAT 58.950 40.000 0.00 0.00 0.00 2.75
478 620 5.046878 TGGCTTTAGAATGGTACTTTCGAGA 60.047 40.000 0.00 0.00 0.00 4.04
479 621 5.175859 TGGCTTTAGAATGGTACTTTCGAG 58.824 41.667 0.00 0.75 0.00 4.04
480 622 5.155278 TGGCTTTAGAATGGTACTTTCGA 57.845 39.130 0.00 0.00 0.00 3.71
481 623 5.584649 TCATGGCTTTAGAATGGTACTTTCG 59.415 40.000 0.00 0.00 0.00 3.46
482 624 6.458888 GCTCATGGCTTTAGAATGGTACTTTC 60.459 42.308 0.00 0.00 38.06 2.62
483 625 5.358160 GCTCATGGCTTTAGAATGGTACTTT 59.642 40.000 0.00 0.00 38.06 2.66
484 626 4.884164 GCTCATGGCTTTAGAATGGTACTT 59.116 41.667 0.00 0.00 38.06 2.24
485 627 4.080356 TGCTCATGGCTTTAGAATGGTACT 60.080 41.667 7.54 0.00 42.39 2.73
486 628 4.199310 TGCTCATGGCTTTAGAATGGTAC 58.801 43.478 7.54 0.00 42.39 3.34
487 629 4.502105 TGCTCATGGCTTTAGAATGGTA 57.498 40.909 7.54 0.00 42.39 3.25
488 630 3.370840 TGCTCATGGCTTTAGAATGGT 57.629 42.857 7.54 0.00 42.39 3.55
489 631 4.724074 TTTGCTCATGGCTTTAGAATGG 57.276 40.909 7.54 0.00 42.39 3.16
490 632 4.506654 GCATTTGCTCATGGCTTTAGAATG 59.493 41.667 7.54 9.68 42.39 2.67
491 633 4.690122 GCATTTGCTCATGGCTTTAGAAT 58.310 39.130 7.54 0.00 42.39 2.40
492 634 4.114058 GCATTTGCTCATGGCTTTAGAA 57.886 40.909 7.54 0.00 42.39 2.10
493 635 3.788333 GCATTTGCTCATGGCTTTAGA 57.212 42.857 7.54 0.00 42.39 2.10
505 647 8.923853 TACTGTTCACATCAGGAGCATTTGCT 62.924 42.308 4.40 4.40 43.72 3.91
506 648 2.229543 TGTTCACATCAGGAGCATTTGC 59.770 45.455 0.00 0.00 42.49 3.68
507 649 3.504906 ACTGTTCACATCAGGAGCATTTG 59.495 43.478 0.00 0.00 37.25 2.32
508 650 3.759581 ACTGTTCACATCAGGAGCATTT 58.240 40.909 0.00 0.00 37.25 2.32
509 651 3.430042 ACTGTTCACATCAGGAGCATT 57.570 42.857 0.00 0.00 37.25 3.56
510 652 4.558226 TTACTGTTCACATCAGGAGCAT 57.442 40.909 0.00 0.00 37.25 3.79
511 653 4.350368 TTTACTGTTCACATCAGGAGCA 57.650 40.909 0.00 0.00 37.25 4.26
512 654 5.412594 TGATTTTACTGTTCACATCAGGAGC 59.587 40.000 0.00 0.00 37.25 4.70
513 655 7.439157 TTGATTTTACTGTTCACATCAGGAG 57.561 36.000 0.00 0.00 37.25 3.69
514 656 7.815840 TTTGATTTTACTGTTCACATCAGGA 57.184 32.000 0.00 0.00 37.25 3.86
515 657 8.870160 TTTTTGATTTTACTGTTCACATCAGG 57.130 30.769 0.00 0.00 37.25 3.86
563 705 9.868277 AAAGTATGTCACAAACAAAATTCAGAA 57.132 25.926 0.00 0.00 42.37 3.02
564 706 9.515020 GAAAGTATGTCACAAACAAAATTCAGA 57.485 29.630 0.00 0.00 42.37 3.27
565 707 9.299963 TGAAAGTATGTCACAAACAAAATTCAG 57.700 29.630 0.00 0.00 42.37 3.02
579 721 7.624360 AAGAAACACTTGTGAAAGTATGTCA 57.376 32.000 7.83 0.00 37.45 3.58
593 735 9.986833 GAAAATTTTAATGCACAAGAAACACTT 57.013 25.926 2.75 0.00 39.70 3.16
594 736 9.160496 TGAAAATTTTAATGCACAAGAAACACT 57.840 25.926 2.75 0.00 0.00 3.55
595 737 9.934190 ATGAAAATTTTAATGCACAAGAAACAC 57.066 25.926 2.75 0.00 0.00 3.32
600 742 9.708092 TCATGATGAAAATTTTAATGCACAAGA 57.292 25.926 5.44 0.00 0.00 3.02
631 773 0.865769 GGCACGACTTTCACGAATGT 59.134 50.000 0.00 0.00 34.70 2.71
632 774 0.865111 TGGCACGACTTTCACGAATG 59.135 50.000 0.00 0.00 34.70 2.67
633 775 1.588674 TTGGCACGACTTTCACGAAT 58.411 45.000 0.00 0.00 34.70 3.34
634 776 1.370609 TTTGGCACGACTTTCACGAA 58.629 45.000 0.00 0.00 34.70 3.85
635 777 1.370609 TTTTGGCACGACTTTCACGA 58.629 45.000 0.00 0.00 34.70 4.35
636 778 2.181426 TTTTTGGCACGACTTTCACG 57.819 45.000 0.00 0.00 0.00 4.35
653 795 7.911727 GCATTTTGAAGCTCTGATTTTGTTTTT 59.088 29.630 0.00 0.00 0.00 1.94
654 796 7.281549 AGCATTTTGAAGCTCTGATTTTGTTTT 59.718 29.630 0.00 0.00 36.00 2.43
655 797 6.764560 AGCATTTTGAAGCTCTGATTTTGTTT 59.235 30.769 0.00 0.00 36.00 2.83
656 798 6.285990 AGCATTTTGAAGCTCTGATTTTGTT 58.714 32.000 0.00 0.00 36.00 2.83
657 799 5.850614 AGCATTTTGAAGCTCTGATTTTGT 58.149 33.333 0.00 0.00 36.00 2.83
658 800 6.780706 AAGCATTTTGAAGCTCTGATTTTG 57.219 33.333 0.00 0.00 40.90 2.44
676 818 9.683069 CTCTGAAAATGTTACTTACAAAAGCAT 57.317 29.630 0.00 0.00 40.89 3.79
677 819 7.647715 GCTCTGAAAATGTTACTTACAAAAGCA 59.352 33.333 0.00 0.00 40.89 3.91
678 820 7.647715 TGCTCTGAAAATGTTACTTACAAAAGC 59.352 33.333 0.00 0.00 40.89 3.51
679 821 9.683069 ATGCTCTGAAAATGTTACTTACAAAAG 57.317 29.630 0.00 0.00 40.89 2.27
680 822 9.677567 GATGCTCTGAAAATGTTACTTACAAAA 57.322 29.630 0.00 0.00 40.89 2.44
681 823 8.015087 CGATGCTCTGAAAATGTTACTTACAAA 58.985 33.333 0.00 0.00 40.89 2.83
682 824 7.386573 TCGATGCTCTGAAAATGTTACTTACAA 59.613 33.333 0.00 0.00 40.89 2.41
683 825 6.871492 TCGATGCTCTGAAAATGTTACTTACA 59.129 34.615 0.00 0.00 41.97 2.41
684 826 7.290857 TCGATGCTCTGAAAATGTTACTTAC 57.709 36.000 0.00 0.00 0.00 2.34
685 827 8.492673 AATCGATGCTCTGAAAATGTTACTTA 57.507 30.769 0.00 0.00 0.00 2.24
686 828 6.992063 ATCGATGCTCTGAAAATGTTACTT 57.008 33.333 0.00 0.00 0.00 2.24
687 829 6.992063 AATCGATGCTCTGAAAATGTTACT 57.008 33.333 0.00 0.00 0.00 2.24
688 830 7.538678 ACAAAATCGATGCTCTGAAAATGTTAC 59.461 33.333 0.00 0.00 0.00 2.50
689 831 7.592938 ACAAAATCGATGCTCTGAAAATGTTA 58.407 30.769 0.00 0.00 0.00 2.41
690 832 6.449698 ACAAAATCGATGCTCTGAAAATGTT 58.550 32.000 0.00 0.00 0.00 2.71
691 833 6.017400 ACAAAATCGATGCTCTGAAAATGT 57.983 33.333 0.00 0.00 0.00 2.71
692 834 6.939551 AACAAAATCGATGCTCTGAAAATG 57.060 33.333 0.00 0.00 0.00 2.32
693 835 7.951530 AAAACAAAATCGATGCTCTGAAAAT 57.048 28.000 0.00 0.00 0.00 1.82
694 836 7.769272 AAAAACAAAATCGATGCTCTGAAAA 57.231 28.000 0.00 0.00 0.00 2.29
716 858 3.383698 TGGTGGAAGGTGTGGTAAAAA 57.616 42.857 0.00 0.00 0.00 1.94
717 859 3.383698 TTGGTGGAAGGTGTGGTAAAA 57.616 42.857 0.00 0.00 0.00 1.52
718 860 3.226777 CATTGGTGGAAGGTGTGGTAAA 58.773 45.455 0.00 0.00 0.00 2.01
719 861 2.175931 ACATTGGTGGAAGGTGTGGTAA 59.824 45.455 0.00 0.00 0.00 2.85
720 862 1.777878 ACATTGGTGGAAGGTGTGGTA 59.222 47.619 0.00 0.00 0.00 3.25
721 863 0.555769 ACATTGGTGGAAGGTGTGGT 59.444 50.000 0.00 0.00 0.00 4.16
722 864 0.961019 CACATTGGTGGAAGGTGTGG 59.039 55.000 0.00 0.00 40.70 4.17
723 865 1.979855 TCACATTGGTGGAAGGTGTG 58.020 50.000 0.00 0.00 44.90 3.82
724 866 2.978156 ATCACATTGGTGGAAGGTGT 57.022 45.000 0.00 0.00 44.90 4.16
725 867 3.366273 CGAAATCACATTGGTGGAAGGTG 60.366 47.826 0.00 0.00 45.79 4.00
726 868 2.819608 CGAAATCACATTGGTGGAAGGT 59.180 45.455 0.00 0.00 45.32 3.50
727 869 2.415893 GCGAAATCACATTGGTGGAAGG 60.416 50.000 0.00 0.00 45.32 3.46
728 870 2.728846 CGCGAAATCACATTGGTGGAAG 60.729 50.000 0.00 0.00 45.32 3.46
729 871 1.198867 CGCGAAATCACATTGGTGGAA 59.801 47.619 0.00 0.00 45.32 3.53
730 872 0.801872 CGCGAAATCACATTGGTGGA 59.198 50.000 0.00 0.00 45.32 4.02
731 873 0.801872 TCGCGAAATCACATTGGTGG 59.198 50.000 6.20 0.00 45.32 4.61
732 874 2.095692 TCATCGCGAAATCACATTGGTG 59.904 45.455 15.24 1.60 46.66 4.17
733 875 2.355197 TCATCGCGAAATCACATTGGT 58.645 42.857 15.24 0.00 0.00 3.67
734 876 3.403613 TTCATCGCGAAATCACATTGG 57.596 42.857 15.24 0.00 0.00 3.16
744 886 3.157510 GCACGTAAAATTTCATCGCGAA 58.842 40.909 15.24 0.00 0.00 4.70
745 887 2.157863 TGCACGTAAAATTTCATCGCGA 59.842 40.909 13.09 13.09 0.00 5.87
746 888 2.272700 GTGCACGTAAAATTTCATCGCG 59.727 45.455 0.00 0.00 0.00 5.87
747 889 3.230355 TGTGCACGTAAAATTTCATCGC 58.770 40.909 13.13 0.00 0.00 4.58
748 890 4.672862 TGTTGTGCACGTAAAATTTCATCG 59.327 37.500 13.13 0.00 0.00 3.84
749 891 6.503616 TTGTTGTGCACGTAAAATTTCATC 57.496 33.333 13.13 0.00 0.00 2.92
750 892 6.893958 TTTGTTGTGCACGTAAAATTTCAT 57.106 29.167 13.13 0.00 0.00 2.57
751 893 6.893958 ATTTGTTGTGCACGTAAAATTTCA 57.106 29.167 13.13 0.00 0.00 2.69
752 894 9.856803 AAATATTTGTTGTGCACGTAAAATTTC 57.143 25.926 21.20 0.01 0.00 2.17
753 895 9.643652 CAAATATTTGTTGTGCACGTAAAATTT 57.356 25.926 21.20 18.33 33.59 1.82
830 972 8.294954 TCCTGGTGTGAACAGTAAAATAAAAA 57.705 30.769 0.00 0.00 34.16 1.94
831 973 7.469456 GCTCCTGGTGTGAACAGTAAAATAAAA 60.469 37.037 0.00 0.00 34.16 1.52
832 974 6.016610 GCTCCTGGTGTGAACAGTAAAATAAA 60.017 38.462 0.00 0.00 34.16 1.40
833 975 5.472137 GCTCCTGGTGTGAACAGTAAAATAA 59.528 40.000 0.00 0.00 34.16 1.40
834 976 5.001232 GCTCCTGGTGTGAACAGTAAAATA 58.999 41.667 0.00 0.00 34.16 1.40
835 977 3.821033 GCTCCTGGTGTGAACAGTAAAAT 59.179 43.478 0.00 0.00 34.16 1.82
836 978 3.211045 GCTCCTGGTGTGAACAGTAAAA 58.789 45.455 0.00 0.00 34.16 1.52
837 979 2.171659 TGCTCCTGGTGTGAACAGTAAA 59.828 45.455 0.00 0.00 34.16 2.01
838 980 1.765904 TGCTCCTGGTGTGAACAGTAA 59.234 47.619 0.00 0.00 34.16 2.24
839 981 1.419381 TGCTCCTGGTGTGAACAGTA 58.581 50.000 0.00 0.00 34.16 2.74
840 982 0.767375 ATGCTCCTGGTGTGAACAGT 59.233 50.000 0.00 0.00 34.16 3.55
841 983 1.901591 AATGCTCCTGGTGTGAACAG 58.098 50.000 0.00 0.00 35.74 3.16
842 984 1.955778 CAAATGCTCCTGGTGTGAACA 59.044 47.619 0.00 0.00 0.00 3.18
843 985 1.336240 GCAAATGCTCCTGGTGTGAAC 60.336 52.381 0.00 0.00 38.21 3.18
844 986 0.961019 GCAAATGCTCCTGGTGTGAA 59.039 50.000 0.00 0.00 38.21 3.18
845 987 2.644887 GCAAATGCTCCTGGTGTGA 58.355 52.632 0.00 0.00 38.21 3.58
856 998 1.098050 CTACACCCAGGAGCAAATGC 58.902 55.000 0.00 0.00 42.49 3.56
857 999 2.787473 TCTACACCCAGGAGCAAATG 57.213 50.000 0.00 0.00 0.00 2.32
858 1000 3.074538 AGTTTCTACACCCAGGAGCAAAT 59.925 43.478 0.00 0.00 0.00 2.32
859 1001 2.441750 AGTTTCTACACCCAGGAGCAAA 59.558 45.455 0.00 0.00 0.00 3.68
860 1002 2.054799 AGTTTCTACACCCAGGAGCAA 58.945 47.619 0.00 0.00 0.00 3.91
861 1003 1.729586 AGTTTCTACACCCAGGAGCA 58.270 50.000 0.00 0.00 0.00 4.26
862 1004 2.038557 TGAAGTTTCTACACCCAGGAGC 59.961 50.000 0.00 0.00 0.00 4.70
863 1005 3.325135 AGTGAAGTTTCTACACCCAGGAG 59.675 47.826 0.00 0.00 35.47 3.69
864 1006 3.314693 AGTGAAGTTTCTACACCCAGGA 58.685 45.455 0.00 0.00 35.47 3.86
865 1007 3.771577 AGTGAAGTTTCTACACCCAGG 57.228 47.619 0.00 0.00 35.47 4.45
866 1008 4.065789 GGAAGTGAAGTTTCTACACCCAG 58.934 47.826 0.00 0.00 35.47 4.45
867 1009 3.181448 GGGAAGTGAAGTTTCTACACCCA 60.181 47.826 0.00 0.00 35.47 4.51
868 1010 3.072622 AGGGAAGTGAAGTTTCTACACCC 59.927 47.826 0.00 0.00 35.47 4.61
869 1011 4.353383 AGGGAAGTGAAGTTTCTACACC 57.647 45.455 0.00 0.00 35.47 4.16
870 1012 5.123936 ACAAGGGAAGTGAAGTTTCTACAC 58.876 41.667 0.00 0.00 35.15 2.90
871 1013 5.367945 ACAAGGGAAGTGAAGTTTCTACA 57.632 39.130 0.00 0.00 0.00 2.74
872 1014 6.594547 GGATACAAGGGAAGTGAAGTTTCTAC 59.405 42.308 0.00 0.00 0.00 2.59
873 1015 6.500751 AGGATACAAGGGAAGTGAAGTTTCTA 59.499 38.462 0.00 0.00 41.41 2.10
874 1016 5.310857 AGGATACAAGGGAAGTGAAGTTTCT 59.689 40.000 0.00 0.00 41.41 2.52
875 1017 5.561679 AGGATACAAGGGAAGTGAAGTTTC 58.438 41.667 0.00 0.00 41.41 2.78
876 1018 5.310857 AGAGGATACAAGGGAAGTGAAGTTT 59.689 40.000 0.00 0.00 41.41 2.66
877 1019 4.846940 AGAGGATACAAGGGAAGTGAAGTT 59.153 41.667 0.00 0.00 41.41 2.66
878 1020 4.430441 AGAGGATACAAGGGAAGTGAAGT 58.570 43.478 0.00 0.00 41.41 3.01
879 1021 4.467795 TGAGAGGATACAAGGGAAGTGAAG 59.532 45.833 0.00 0.00 41.41 3.02
880 1022 4.425772 TGAGAGGATACAAGGGAAGTGAA 58.574 43.478 0.00 0.00 41.41 3.18
881 1023 4.061131 TGAGAGGATACAAGGGAAGTGA 57.939 45.455 0.00 0.00 41.41 3.41
882 1024 4.223923 AGTTGAGAGGATACAAGGGAAGTG 59.776 45.833 0.00 0.00 41.41 3.16
883 1025 4.430441 AGTTGAGAGGATACAAGGGAAGT 58.570 43.478 0.00 0.00 41.41 3.01
884 1026 4.714308 AGAGTTGAGAGGATACAAGGGAAG 59.286 45.833 0.00 0.00 41.41 3.46
885 1027 4.689062 AGAGTTGAGAGGATACAAGGGAA 58.311 43.478 0.00 0.00 41.41 3.97
886 1028 4.338795 AGAGTTGAGAGGATACAAGGGA 57.661 45.455 0.00 0.00 41.41 4.20
887 1029 5.068460 CACTAGAGTTGAGAGGATACAAGGG 59.932 48.000 0.00 0.00 41.41 3.95
952 1094 2.040545 AGACCTCGAGACTCTTGGAAGA 59.959 50.000 15.71 0.00 0.00 2.87
990 1138 2.466982 GCGCTTCATGCTGCTGCTA 61.467 57.895 17.00 3.79 40.48 3.49
1424 1587 1.859841 AACGGGGAAAAGGGCTAGGG 61.860 60.000 0.00 0.00 0.00 3.53
1427 1590 0.772384 TGAAACGGGGAAAAGGGCTA 59.228 50.000 0.00 0.00 0.00 3.93
1428 1591 0.826256 GTGAAACGGGGAAAAGGGCT 60.826 55.000 0.00 0.00 0.00 5.19
1429 1592 1.663739 GTGAAACGGGGAAAAGGGC 59.336 57.895 0.00 0.00 0.00 5.19
1431 1594 0.178973 AGGGTGAAACGGGGAAAAGG 60.179 55.000 0.00 0.00 38.12 3.11
1432 1595 1.244816 GAGGGTGAAACGGGGAAAAG 58.755 55.000 0.00 0.00 38.12 2.27
1433 1596 0.178984 GGAGGGTGAAACGGGGAAAA 60.179 55.000 0.00 0.00 38.12 2.29
1434 1597 1.063654 AGGAGGGTGAAACGGGGAAA 61.064 55.000 0.00 0.00 38.12 3.13
1478 1646 1.968540 GGTCAGAACACAGCAGCCC 60.969 63.158 0.00 0.00 0.00 5.19
1523 1764 1.665599 CAACCCCGTACGTGTGACC 60.666 63.158 15.21 0.00 0.00 4.02
1524 1765 1.665599 CCAACCCCGTACGTGTGAC 60.666 63.158 15.21 0.00 0.00 3.67
1525 1766 2.132996 ACCAACCCCGTACGTGTGA 61.133 57.895 15.21 0.00 0.00 3.58
1527 1768 2.422591 CACCAACCCCGTACGTGT 59.577 61.111 15.21 8.19 0.00 4.49
1528 1769 2.357760 CCACCAACCCCGTACGTG 60.358 66.667 15.21 1.82 0.00 4.49
1530 1771 2.263540 CTCCACCAACCCCGTACG 59.736 66.667 8.69 8.69 0.00 3.67
1549 1793 5.945784 TCCTAAAATTGTTGAGCTGCACTAT 59.054 36.000 1.02 0.00 0.00 2.12
1667 1988 0.747283 AGCTCCATTGCAGCTACAGC 60.747 55.000 0.00 0.00 45.76 4.40
1699 2021 5.583932 AGACCTCAAAATCCCTAGCAAAAT 58.416 37.500 0.00 0.00 0.00 1.82
1799 2164 6.446318 TGGAAGTGCATTGCTTTTTACTTAG 58.554 36.000 10.49 0.00 0.00 2.18
1857 2222 6.096036 CCACTGTATTCTATGATAGGCTTCG 58.904 44.000 0.00 0.00 0.00 3.79
1945 2344 5.873179 TTTTAATAAGCCCAGACGTTCAG 57.127 39.130 0.00 0.00 0.00 3.02
1975 2374 6.040166 CAGCTATTCTGAACCTGGCAATAAAT 59.960 38.462 0.00 0.00 45.72 1.40
2027 2426 3.000925 GGAAATTCCTATACACACGCACG 59.999 47.826 4.46 0.00 32.53 5.34
2080 2479 8.926710 AGACATAACGAAGTCTAAATCAACTTG 58.073 33.333 0.00 0.00 45.00 3.16
2081 2480 9.141400 GAGACATAACGAAGTCTAAATCAACTT 57.859 33.333 0.00 0.00 45.00 2.66
2124 2523 5.625721 CACGGATCTCAACGTATGATCTAAC 59.374 44.000 18.33 7.28 42.04 2.34
2158 2557 9.142014 TGTAAGAAAGAAAATGGAAATCTGGAA 57.858 29.630 0.00 0.00 0.00 3.53
2201 2604 7.719633 AGTCAACTTAGCTTTAACCAAATCTCA 59.280 33.333 0.00 0.00 0.00 3.27
2210 2613 9.356433 CTAGGTCTTAGTCAACTTAGCTTTAAC 57.644 37.037 0.00 0.00 0.00 2.01
2216 2619 4.159879 TGGCTAGGTCTTAGTCAACTTAGC 59.840 45.833 7.79 7.79 45.32 3.09
2238 2641 4.432712 CTCCTGTTTTGAAAAAGGGTGTG 58.567 43.478 11.78 0.00 42.61 3.82
2239 2642 3.118775 GCTCCTGTTTTGAAAAAGGGTGT 60.119 43.478 11.78 0.00 42.61 4.16
2240 2643 3.118811 TGCTCCTGTTTTGAAAAAGGGTG 60.119 43.478 11.78 11.00 42.61 4.61
2241 2644 3.103742 TGCTCCTGTTTTGAAAAAGGGT 58.896 40.909 11.78 0.00 42.61 4.34
2242 2645 3.817709 TGCTCCTGTTTTGAAAAAGGG 57.182 42.857 11.78 9.96 42.61 3.95
2243 2646 6.682423 ATTTTGCTCCTGTTTTGAAAAAGG 57.318 33.333 6.38 6.38 43.54 3.11
2244 2647 8.829612 ACATATTTTGCTCCTGTTTTGAAAAAG 58.170 29.630 0.00 0.00 0.00 2.27
2245 2648 8.610896 CACATATTTTGCTCCTGTTTTGAAAAA 58.389 29.630 0.00 0.00 0.00 1.94
2246 2649 7.768120 ACACATATTTTGCTCCTGTTTTGAAAA 59.232 29.630 0.00 0.00 0.00 2.29
2247 2650 7.271511 ACACATATTTTGCTCCTGTTTTGAAA 58.728 30.769 0.00 0.00 0.00 2.69
2248 2651 6.815089 ACACATATTTTGCTCCTGTTTTGAA 58.185 32.000 0.00 0.00 0.00 2.69
2249 2652 6.265196 AGACACATATTTTGCTCCTGTTTTGA 59.735 34.615 0.00 0.00 0.00 2.69
2250 2653 6.449698 AGACACATATTTTGCTCCTGTTTTG 58.550 36.000 0.00 0.00 0.00 2.44
2251 2654 6.568462 CGAGACACATATTTTGCTCCTGTTTT 60.568 38.462 0.00 0.00 0.00 2.43
2252 2655 5.106555 CGAGACACATATTTTGCTCCTGTTT 60.107 40.000 0.00 0.00 0.00 2.83
2253 2656 4.393062 CGAGACACATATTTTGCTCCTGTT 59.607 41.667 0.00 0.00 0.00 3.16
2254 2657 3.935203 CGAGACACATATTTTGCTCCTGT 59.065 43.478 0.00 0.00 0.00 4.00
2255 2658 3.935203 ACGAGACACATATTTTGCTCCTG 59.065 43.478 0.00 0.00 0.00 3.86
2256 2659 4.184629 GACGAGACACATATTTTGCTCCT 58.815 43.478 0.00 0.00 0.00 3.69
2257 2660 3.309954 GGACGAGACACATATTTTGCTCC 59.690 47.826 0.00 0.00 0.00 4.70
2258 2661 3.932710 TGGACGAGACACATATTTTGCTC 59.067 43.478 0.00 0.00 0.00 4.26
2259 2662 3.937814 TGGACGAGACACATATTTTGCT 58.062 40.909 0.00 0.00 0.00 3.91
2260 2663 4.882671 ATGGACGAGACACATATTTTGC 57.117 40.909 0.00 0.00 0.00 3.68
2264 2667 8.774586 GCTTAATTAATGGACGAGACACATATT 58.225 33.333 0.00 0.00 0.00 1.28
2265 2668 7.931407 TGCTTAATTAATGGACGAGACACATAT 59.069 33.333 0.00 0.00 0.00 1.78
2266 2669 7.269316 TGCTTAATTAATGGACGAGACACATA 58.731 34.615 0.00 0.00 0.00 2.29
2267 2670 6.112734 TGCTTAATTAATGGACGAGACACAT 58.887 36.000 0.00 0.00 0.00 3.21
2268 2671 5.483811 TGCTTAATTAATGGACGAGACACA 58.516 37.500 0.00 0.00 0.00 3.72
2269 2672 6.417191 TTGCTTAATTAATGGACGAGACAC 57.583 37.500 0.00 0.00 0.00 3.67
2270 2673 7.041030 TGTTTTGCTTAATTAATGGACGAGACA 60.041 33.333 0.00 0.00 0.00 3.41
2271 2674 7.302524 TGTTTTGCTTAATTAATGGACGAGAC 58.697 34.615 0.00 0.00 0.00 3.36
2272 2675 7.389330 TCTGTTTTGCTTAATTAATGGACGAGA 59.611 33.333 0.00 0.00 0.00 4.04
2273 2676 7.526608 TCTGTTTTGCTTAATTAATGGACGAG 58.473 34.615 0.00 0.00 0.00 4.18
2274 2677 7.441890 TCTGTTTTGCTTAATTAATGGACGA 57.558 32.000 0.00 0.00 0.00 4.20
2275 2678 8.687824 ATTCTGTTTTGCTTAATTAATGGACG 57.312 30.769 0.00 0.00 0.00 4.79
2277 2680 9.995003 ACAATTCTGTTTTGCTTAATTAATGGA 57.005 25.926 0.00 0.00 28.57 3.41
2282 2685 8.977505 GCTTGACAATTCTGTTTTGCTTAATTA 58.022 29.630 0.00 0.00 35.30 1.40
2283 2686 7.712205 AGCTTGACAATTCTGTTTTGCTTAATT 59.288 29.630 0.00 0.00 35.30 1.40
2284 2687 7.212274 AGCTTGACAATTCTGTTTTGCTTAAT 58.788 30.769 0.00 0.00 35.30 1.40
2285 2688 6.572519 AGCTTGACAATTCTGTTTTGCTTAA 58.427 32.000 0.00 0.00 35.30 1.85
2286 2689 6.147864 AGCTTGACAATTCTGTTTTGCTTA 57.852 33.333 0.00 0.00 35.30 3.09
2287 2690 5.014808 AGCTTGACAATTCTGTTTTGCTT 57.985 34.783 0.00 0.00 35.30 3.91
2288 2691 4.660789 AGCTTGACAATTCTGTTTTGCT 57.339 36.364 0.00 0.00 35.30 3.91
2289 2692 7.412137 AATTAGCTTGACAATTCTGTTTTGC 57.588 32.000 0.00 0.00 35.30 3.68
2318 2721 6.766467 ACGGACTGAGTTCTCAACTAATTTTT 59.234 34.615 4.09 0.00 43.03 1.94
2319 2722 6.289064 ACGGACTGAGTTCTCAACTAATTTT 58.711 36.000 4.09 0.00 43.03 1.82
2320 2723 5.855045 ACGGACTGAGTTCTCAACTAATTT 58.145 37.500 4.09 0.00 43.03 1.82
2321 2724 5.470047 ACGGACTGAGTTCTCAACTAATT 57.530 39.130 4.09 0.00 43.03 1.40
2322 2725 5.230942 CAACGGACTGAGTTCTCAACTAAT 58.769 41.667 4.09 0.00 43.03 1.73
2323 2726 4.500887 CCAACGGACTGAGTTCTCAACTAA 60.501 45.833 4.09 0.00 43.03 2.24
2324 2727 3.005472 CCAACGGACTGAGTTCTCAACTA 59.995 47.826 4.09 0.00 43.03 2.24
2325 2728 2.224066 CCAACGGACTGAGTTCTCAACT 60.224 50.000 4.09 0.00 46.38 3.16
2326 2729 2.135933 CCAACGGACTGAGTTCTCAAC 58.864 52.381 4.09 2.07 0.00 3.18
2327 2730 2.036387 TCCAACGGACTGAGTTCTCAA 58.964 47.619 4.09 0.00 0.00 3.02
2328 2731 1.699730 TCCAACGGACTGAGTTCTCA 58.300 50.000 2.49 2.49 0.00 3.27
2339 2742 1.666553 GTGTGCGATGTCCAACGGA 60.667 57.895 0.00 0.00 0.00 4.69
2340 2743 1.900585 CTGTGTGCGATGTCCAACGG 61.901 60.000 0.00 0.00 0.00 4.44
2341 2744 1.492873 CTGTGTGCGATGTCCAACG 59.507 57.895 0.00 0.00 0.00 4.10
2342 2745 0.602638 TCCTGTGTGCGATGTCCAAC 60.603 55.000 0.00 0.00 0.00 3.77
2343 2746 0.324614 ATCCTGTGTGCGATGTCCAA 59.675 50.000 0.00 0.00 0.00 3.53
2344 2747 1.190643 TATCCTGTGTGCGATGTCCA 58.809 50.000 0.00 0.00 0.00 4.02
2345 2748 2.533266 ATATCCTGTGTGCGATGTCC 57.467 50.000 0.00 0.00 0.00 4.02
2346 2749 2.802816 GGAATATCCTGTGTGCGATGTC 59.197 50.000 0.00 0.00 32.53 3.06
2347 2750 2.170397 TGGAATATCCTGTGTGCGATGT 59.830 45.455 0.00 0.00 37.46 3.06
2348 2751 2.545526 GTGGAATATCCTGTGTGCGATG 59.454 50.000 0.00 0.00 37.46 3.84
2349 2752 2.170397 TGTGGAATATCCTGTGTGCGAT 59.830 45.455 0.00 0.00 37.46 4.58
2350 2753 1.552792 TGTGGAATATCCTGTGTGCGA 59.447 47.619 0.00 0.00 37.46 5.10
2351 2754 2.022764 TGTGGAATATCCTGTGTGCG 57.977 50.000 0.00 0.00 37.46 5.34
2352 2755 4.708177 AGTATGTGGAATATCCTGTGTGC 58.292 43.478 0.00 0.00 37.46 4.57
2353 2756 5.987953 CAGAGTATGTGGAATATCCTGTGTG 59.012 44.000 0.00 0.00 37.46 3.82
2354 2757 5.663106 ACAGAGTATGTGGAATATCCTGTGT 59.337 40.000 0.00 0.00 41.91 3.72
2355 2758 6.166984 ACAGAGTATGTGGAATATCCTGTG 57.833 41.667 0.00 0.00 41.91 3.66
2373 2776 9.930176 TATCTCGACCAGACTCTCTTCACAGAG 62.930 48.148 0.00 0.00 44.96 3.35
2374 2777 2.155279 CGACCAGACTCTCTTCACAGA 58.845 52.381 0.00 0.00 0.00 3.41
2375 2778 2.155279 TCGACCAGACTCTCTTCACAG 58.845 52.381 0.00 0.00 0.00 3.66
2376 2779 2.155279 CTCGACCAGACTCTCTTCACA 58.845 52.381 0.00 0.00 0.00 3.58
2377 2780 2.428491 TCTCGACCAGACTCTCTTCAC 58.572 52.381 0.00 0.00 0.00 3.18
2378 2781 2.861147 TCTCGACCAGACTCTCTTCA 57.139 50.000 0.00 0.00 0.00 3.02
2379 2782 3.250040 GCTATCTCGACCAGACTCTCTTC 59.750 52.174 0.00 0.00 32.26 2.87
2380 2783 3.211045 GCTATCTCGACCAGACTCTCTT 58.789 50.000 0.00 0.00 32.26 2.85
2381 2784 2.171659 TGCTATCTCGACCAGACTCTCT 59.828 50.000 0.00 0.00 32.26 3.10
2382 2785 2.289547 GTGCTATCTCGACCAGACTCTC 59.710 54.545 0.00 0.00 32.26 3.20
2383 2786 2.294074 GTGCTATCTCGACCAGACTCT 58.706 52.381 0.00 0.00 32.26 3.24
2384 2787 2.017782 TGTGCTATCTCGACCAGACTC 58.982 52.381 0.00 0.00 32.26 3.36
2385 2788 2.130272 TGTGCTATCTCGACCAGACT 57.870 50.000 0.00 0.00 32.26 3.24
2386 2789 3.057876 CCTATGTGCTATCTCGACCAGAC 60.058 52.174 0.00 0.00 32.26 3.51
2387 2790 3.149981 CCTATGTGCTATCTCGACCAGA 58.850 50.000 0.00 0.00 34.78 3.86
2388 2791 2.352225 GCCTATGTGCTATCTCGACCAG 60.352 54.545 0.00 0.00 0.00 4.00
2389 2792 1.613925 GCCTATGTGCTATCTCGACCA 59.386 52.381 0.00 0.00 0.00 4.02
2390 2793 1.613925 TGCCTATGTGCTATCTCGACC 59.386 52.381 0.00 0.00 0.00 4.79
2391 2794 2.608261 GGTGCCTATGTGCTATCTCGAC 60.608 54.545 0.00 0.00 0.00 4.20
2392 2795 1.613925 GGTGCCTATGTGCTATCTCGA 59.386 52.381 0.00 0.00 0.00 4.04
2393 2796 1.341209 TGGTGCCTATGTGCTATCTCG 59.659 52.381 0.00 0.00 0.00 4.04
2394 2797 3.594134 GATGGTGCCTATGTGCTATCTC 58.406 50.000 0.00 0.00 0.00 2.75
2395 2798 2.028658 CGATGGTGCCTATGTGCTATCT 60.029 50.000 0.00 0.00 0.00 1.98
2396 2799 2.289072 ACGATGGTGCCTATGTGCTATC 60.289 50.000 0.00 0.00 0.00 2.08
2397 2800 1.694150 ACGATGGTGCCTATGTGCTAT 59.306 47.619 0.00 0.00 0.00 2.97
2398 2801 1.068588 GACGATGGTGCCTATGTGCTA 59.931 52.381 0.00 0.00 0.00 3.49
2399 2802 0.179073 GACGATGGTGCCTATGTGCT 60.179 55.000 0.00 0.00 0.00 4.40
2400 2803 0.461870 TGACGATGGTGCCTATGTGC 60.462 55.000 0.00 0.00 0.00 4.57
2401 2804 3.758715 TGACGATGGTGCCTATGTG 57.241 52.632 0.00 0.00 0.00 3.21


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.