Multiple sequence alignment - TraesCS7B01G368100

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G368100 chr7B 100.000 3797 0 0 1 3797 632662822 632659026 0.000000e+00 7012
1 TraesCS7B01G368100 chr7B 81.897 464 58 12 2535 2987 632496142 632495694 5.990000e-98 368
2 TraesCS7B01G368100 chr7D 88.822 2317 126 58 275 2537 573831831 573829594 0.000000e+00 2721
3 TraesCS7B01G368100 chr7D 91.312 541 19 12 2535 3059 573829494 573828966 0.000000e+00 713
4 TraesCS7B01G368100 chr7D 84.816 461 41 13 2535 2987 573718920 573718481 1.620000e-118 436
5 TraesCS7B01G368100 chr7D 82.553 470 24 23 3205 3620 573828695 573828230 1.000000e-95 361
6 TraesCS7B01G368100 chr7D 89.005 191 19 2 1 189 573832027 573831837 6.340000e-58 235
7 TraesCS7B01G368100 chr7A 90.651 2075 112 42 761 2806 663537777 663535756 0.000000e+00 2682
8 TraesCS7B01G368100 chr7A 84.083 289 18 12 500 775 663538069 663537796 1.750000e-63 254
9 TraesCS7B01G368100 chr5B 85.992 257 27 4 1553 1803 53322746 53322999 2.250000e-67 267
10 TraesCS7B01G368100 chr5B 86.555 119 12 1 2026 2140 53322996 53323114 1.110000e-25 128
11 TraesCS7B01G368100 chr4B 85.992 257 27 4 1553 1803 1730245 1729992 2.250000e-67 267
12 TraesCS7B01G368100 chr2B 83.582 268 34 5 1553 1814 722016972 722017235 3.790000e-60 243
13 TraesCS7B01G368100 chr6B 88.235 119 10 1 2026 2140 107629534 107629652 5.110000e-29 139
14 TraesCS7B01G368100 chr3B 88.235 119 10 1 2026 2140 759966612 759966494 5.110000e-29 139


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G368100 chr7B 632659026 632662822 3796 True 7012.0 7012 100.000 1 3797 1 chr7B.!!$R2 3796
1 TraesCS7B01G368100 chr7D 573828230 573832027 3797 True 1007.5 2721 87.923 1 3620 4 chr7D.!!$R2 3619
2 TraesCS7B01G368100 chr7A 663535756 663538069 2313 True 1468.0 2682 87.367 500 2806 2 chr7A.!!$R1 2306

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
197 200 0.036306 ACCTGTTCCTTCGCCGAAAT 59.964 50.0 0.00 0.00 0.00 2.17 F
267 270 0.251922 ACCACCTCCTTGCATGCATT 60.252 50.0 23.37 0.00 0.00 3.56 F
1325 1408 0.035915 AAGAAGAAGAAGGCCGAGGC 60.036 55.0 5.37 5.37 41.06 4.70 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1266 1349 0.107945 CCTCCTTCTTCTTGGCCTCG 60.108 60.0 3.32 0.00 0.00 4.63 R
2252 2395 0.103755 GATCAGGATCTGCAGCACGA 59.896 55.0 9.47 1.12 35.04 4.35 R
3156 3422 0.032017 ATAGACGGCCAAGAGGAGGT 60.032 55.0 2.24 0.00 36.89 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
66 68 6.925165 TCTTTTATTTCTCCAGCTTGCAAAAG 59.075 34.615 0.00 0.00 33.75 2.27
68 70 0.675633 TTCTCCAGCTTGCAAAAGGC 59.324 50.000 0.00 0.00 45.13 4.35
86 89 0.673644 GCGGTAGACAATGCACCACT 60.674 55.000 0.00 0.00 32.32 4.00
95 98 4.575180 TGCACCACTGAATGCACA 57.425 50.000 0.00 0.00 46.63 4.57
96 99 2.333291 TGCACCACTGAATGCACAG 58.667 52.632 2.91 2.91 46.63 3.66
98 101 1.202746 TGCACCACTGAATGCACAGTA 60.203 47.619 9.43 0.00 46.63 2.74
128 131 4.718961 ACTATGAACATATGACTTGGCCC 58.281 43.478 10.38 0.00 0.00 5.80
136 139 0.482446 ATGACTTGGCCCAGGACAAA 59.518 50.000 6.40 0.00 43.25 2.83
147 150 3.056328 GGACAAAGGACGCCTGCC 61.056 66.667 0.00 0.00 32.13 4.85
148 151 2.281484 GACAAAGGACGCCTGCCA 60.281 61.111 0.00 0.00 32.13 4.92
165 168 1.136891 GCCACAAATCATAGGCCAACC 59.863 52.381 5.01 0.00 41.25 3.77
173 176 0.107017 CATAGGCCAACCCAGACAGG 60.107 60.000 5.01 0.00 36.11 4.00
189 192 4.081050 GGGTGCACCTGTTCCTTC 57.919 61.111 33.91 12.20 35.85 3.46
191 194 2.617274 GGTGCACCTGTTCCTTCGC 61.617 63.158 29.12 0.00 0.00 4.70
192 195 2.281484 TGCACCTGTTCCTTCGCC 60.281 61.111 0.00 0.00 0.00 5.54
193 196 3.423154 GCACCTGTTCCTTCGCCG 61.423 66.667 0.00 0.00 0.00 6.46
194 197 2.342279 CACCTGTTCCTTCGCCGA 59.658 61.111 0.00 0.00 0.00 5.54
195 198 1.301401 CACCTGTTCCTTCGCCGAA 60.301 57.895 0.00 0.00 0.00 4.30
196 199 0.882927 CACCTGTTCCTTCGCCGAAA 60.883 55.000 0.00 0.00 0.00 3.46
197 200 0.036306 ACCTGTTCCTTCGCCGAAAT 59.964 50.000 0.00 0.00 0.00 2.17
198 201 1.276989 ACCTGTTCCTTCGCCGAAATA 59.723 47.619 0.00 0.00 0.00 1.40
199 202 2.289819 ACCTGTTCCTTCGCCGAAATAA 60.290 45.455 0.00 0.00 0.00 1.40
200 203 2.943033 CCTGTTCCTTCGCCGAAATAAT 59.057 45.455 0.00 0.00 0.00 1.28
201 204 3.377172 CCTGTTCCTTCGCCGAAATAATT 59.623 43.478 0.00 0.00 0.00 1.40
202 205 4.142469 CCTGTTCCTTCGCCGAAATAATTT 60.142 41.667 0.00 0.00 0.00 1.82
203 206 5.379732 TGTTCCTTCGCCGAAATAATTTT 57.620 34.783 0.00 0.00 0.00 1.82
204 207 5.774630 TGTTCCTTCGCCGAAATAATTTTT 58.225 33.333 0.00 0.00 0.00 1.94
229 232 7.790823 TTTTAAAAGCGTACTTGTTCCTACT 57.209 32.000 0.00 0.00 35.85 2.57
230 233 8.885494 TTTTAAAAGCGTACTTGTTCCTACTA 57.115 30.769 0.00 0.00 35.85 1.82
231 234 7.873739 TTAAAAGCGTACTTGTTCCTACTAC 57.126 36.000 0.00 0.00 35.85 2.73
232 235 5.718724 AAAGCGTACTTGTTCCTACTACT 57.281 39.130 0.00 0.00 35.85 2.57
233 236 5.718724 AAGCGTACTTGTTCCTACTACTT 57.281 39.130 0.00 0.00 33.84 2.24
234 237 5.307926 AGCGTACTTGTTCCTACTACTTC 57.692 43.478 0.00 0.00 0.00 3.01
235 238 4.763793 AGCGTACTTGTTCCTACTACTTCA 59.236 41.667 0.00 0.00 0.00 3.02
236 239 5.242393 AGCGTACTTGTTCCTACTACTTCAA 59.758 40.000 0.00 0.00 0.00 2.69
237 240 6.071503 AGCGTACTTGTTCCTACTACTTCAAT 60.072 38.462 0.00 0.00 0.00 2.57
238 241 6.589139 GCGTACTTGTTCCTACTACTTCAATT 59.411 38.462 0.00 0.00 0.00 2.32
239 242 7.756722 GCGTACTTGTTCCTACTACTTCAATTA 59.243 37.037 0.00 0.00 0.00 1.40
240 243 9.630098 CGTACTTGTTCCTACTACTTCAATTAA 57.370 33.333 0.00 0.00 0.00 1.40
245 248 9.629878 TTGTTCCTACTACTTCAATTAAAACCA 57.370 29.630 0.00 0.00 0.00 3.67
246 249 9.280174 TGTTCCTACTACTTCAATTAAAACCAG 57.720 33.333 0.00 0.00 0.00 4.00
247 250 7.916914 TCCTACTACTTCAATTAAAACCAGC 57.083 36.000 0.00 0.00 0.00 4.85
248 251 7.455058 TCCTACTACTTCAATTAAAACCAGCA 58.545 34.615 0.00 0.00 0.00 4.41
249 252 7.389607 TCCTACTACTTCAATTAAAACCAGCAC 59.610 37.037 0.00 0.00 0.00 4.40
250 253 6.327279 ACTACTTCAATTAAAACCAGCACC 57.673 37.500 0.00 0.00 0.00 5.01
251 254 5.830991 ACTACTTCAATTAAAACCAGCACCA 59.169 36.000 0.00 0.00 0.00 4.17
252 255 4.944048 ACTTCAATTAAAACCAGCACCAC 58.056 39.130 0.00 0.00 0.00 4.16
253 256 4.202212 ACTTCAATTAAAACCAGCACCACC 60.202 41.667 0.00 0.00 0.00 4.61
254 257 3.571590 TCAATTAAAACCAGCACCACCT 58.428 40.909 0.00 0.00 0.00 4.00
255 258 3.572255 TCAATTAAAACCAGCACCACCTC 59.428 43.478 0.00 0.00 0.00 3.85
256 259 1.989706 TTAAAACCAGCACCACCTCC 58.010 50.000 0.00 0.00 0.00 4.30
257 260 1.145571 TAAAACCAGCACCACCTCCT 58.854 50.000 0.00 0.00 0.00 3.69
258 261 0.261696 AAAACCAGCACCACCTCCTT 59.738 50.000 0.00 0.00 0.00 3.36
259 262 0.468029 AAACCAGCACCACCTCCTTG 60.468 55.000 0.00 0.00 0.00 3.61
260 263 2.674380 CCAGCACCACCTCCTTGC 60.674 66.667 0.00 0.00 36.45 4.01
261 264 2.113774 CAGCACCACCTCCTTGCA 59.886 61.111 0.00 0.00 38.81 4.08
262 265 1.303888 CAGCACCACCTCCTTGCAT 60.304 57.895 0.00 0.00 38.81 3.96
263 266 1.303888 AGCACCACCTCCTTGCATG 60.304 57.895 0.00 0.00 38.81 4.06
264 267 2.998279 GCACCACCTCCTTGCATGC 61.998 63.158 11.82 11.82 36.22 4.06
265 268 1.604308 CACCACCTCCTTGCATGCA 60.604 57.895 18.46 18.46 0.00 3.96
266 269 0.968901 CACCACCTCCTTGCATGCAT 60.969 55.000 23.37 1.46 0.00 3.96
267 270 0.251922 ACCACCTCCTTGCATGCATT 60.252 50.000 23.37 0.00 0.00 3.56
268 271 0.899720 CCACCTCCTTGCATGCATTT 59.100 50.000 23.37 0.00 0.00 2.32
269 272 1.134907 CCACCTCCTTGCATGCATTTC 60.135 52.381 23.37 0.00 0.00 2.17
270 273 1.546923 CACCTCCTTGCATGCATTTCA 59.453 47.619 23.37 5.27 0.00 2.69
271 274 2.167693 CACCTCCTTGCATGCATTTCAT 59.832 45.455 23.37 3.00 35.31 2.57
272 275 2.835764 ACCTCCTTGCATGCATTTCATT 59.164 40.909 23.37 2.15 31.79 2.57
273 276 3.262405 ACCTCCTTGCATGCATTTCATTT 59.738 39.130 23.37 0.50 31.79 2.32
298 301 2.787994 AGCTTGCAATTAGCTGTGACT 58.212 42.857 10.56 0.00 46.71 3.41
305 308 5.252547 TGCAATTAGCTGTGACTCCATAAA 58.747 37.500 0.00 0.00 45.94 1.40
309 312 6.992063 ATTAGCTGTGACTCCATAAACAAG 57.008 37.500 0.00 0.00 0.00 3.16
315 318 1.024579 ACTCCATAAACAAGGCGCCG 61.025 55.000 23.20 10.77 0.00 6.46
320 323 1.333619 CATAAACAAGGCGCCGCTAAT 59.666 47.619 23.20 11.59 0.00 1.73
349 352 9.235537 CAATGACATAAATTTCATAATGCGTGA 57.764 29.630 0.00 0.00 31.99 4.35
350 353 9.800433 AATGACATAAATTTCATAATGCGTGAA 57.200 25.926 0.00 0.00 31.99 3.18
351 354 8.613613 TGACATAAATTTCATAATGCGTGAAC 57.386 30.769 0.00 0.00 35.47 3.18
352 355 7.700234 TGACATAAATTTCATAATGCGTGAACC 59.300 33.333 0.00 0.00 35.47 3.62
353 356 6.978080 ACATAAATTTCATAATGCGTGAACCC 59.022 34.615 0.00 0.00 35.47 4.11
354 357 4.385358 AATTTCATAATGCGTGAACCCC 57.615 40.909 0.00 0.00 35.47 4.95
355 358 2.498644 TTCATAATGCGTGAACCCCA 57.501 45.000 0.00 0.00 31.07 4.96
356 359 2.727123 TCATAATGCGTGAACCCCAT 57.273 45.000 0.00 0.00 0.00 4.00
357 360 3.011566 TCATAATGCGTGAACCCCATT 57.988 42.857 0.00 0.00 34.01 3.16
358 361 2.687425 TCATAATGCGTGAACCCCATTG 59.313 45.455 0.00 0.00 32.07 2.82
359 362 1.468985 TAATGCGTGAACCCCATTGG 58.531 50.000 0.00 0.00 41.37 3.16
361 364 2.988684 GCGTGAACCCCATTGGCA 60.989 61.111 0.00 0.00 37.83 4.92
362 365 2.350458 GCGTGAACCCCATTGGCAT 61.350 57.895 0.00 0.00 37.83 4.40
364 367 1.468985 CGTGAACCCCATTGGCATTA 58.531 50.000 0.00 0.00 37.83 1.90
365 368 2.031120 CGTGAACCCCATTGGCATTAT 58.969 47.619 0.00 0.00 37.83 1.28
366 369 2.223782 CGTGAACCCCATTGGCATTATG 60.224 50.000 0.00 0.00 37.83 1.90
367 370 3.030291 GTGAACCCCATTGGCATTATGA 58.970 45.455 0.00 0.00 37.83 2.15
368 371 3.450457 GTGAACCCCATTGGCATTATGAA 59.550 43.478 0.00 0.00 37.83 2.57
369 372 4.081198 GTGAACCCCATTGGCATTATGAAA 60.081 41.667 0.00 0.00 37.83 2.69
370 373 4.720773 TGAACCCCATTGGCATTATGAAAT 59.279 37.500 0.00 0.00 37.83 2.17
371 374 5.191323 TGAACCCCATTGGCATTATGAAATT 59.809 36.000 0.00 0.00 37.83 1.82
372 375 5.713760 ACCCCATTGGCATTATGAAATTT 57.286 34.783 0.00 0.00 37.83 1.82
373 376 6.821616 ACCCCATTGGCATTATGAAATTTA 57.178 33.333 0.00 0.00 37.83 1.40
374 377 7.391388 ACCCCATTGGCATTATGAAATTTAT 57.609 32.000 0.00 0.00 37.83 1.40
375 378 7.814356 ACCCCATTGGCATTATGAAATTTATT 58.186 30.769 0.00 0.00 37.83 1.40
376 379 8.280807 ACCCCATTGGCATTATGAAATTTATTT 58.719 29.630 0.00 0.00 37.83 1.40
377 380 8.785946 CCCCATTGGCATTATGAAATTTATTTC 58.214 33.333 8.00 8.00 44.83 2.17
415 418 8.103305 ACTAGCAAGAACAAGAAATATCCTCAA 58.897 33.333 0.00 0.00 0.00 3.02
426 438 8.919661 CAAGAAATATCCTCAAAAAGCAAGAAC 58.080 33.333 0.00 0.00 0.00 3.01
456 468 3.051210 CTGTCAGGTCAGACGCCA 58.949 61.111 0.00 0.00 41.41 5.69
483 495 3.370953 GGCAGTCACCCAGTCAGATTTAT 60.371 47.826 0.00 0.00 0.00 1.40
485 497 4.702131 GCAGTCACCCAGTCAGATTTATTT 59.298 41.667 0.00 0.00 0.00 1.40
488 500 7.067494 GCAGTCACCCAGTCAGATTTATTTATT 59.933 37.037 0.00 0.00 0.00 1.40
489 501 8.960591 CAGTCACCCAGTCAGATTTATTTATTT 58.039 33.333 0.00 0.00 0.00 1.40
531 543 1.157257 GGCCCAACAAACAAAAGCGG 61.157 55.000 0.00 0.00 0.00 5.52
548 564 3.942829 AGCGGATCAATCAAACAAGAGA 58.057 40.909 0.00 0.00 0.00 3.10
549 565 3.686726 AGCGGATCAATCAAACAAGAGAC 59.313 43.478 0.00 0.00 0.00 3.36
551 567 3.062639 CGGATCAATCAAACAAGAGACGG 59.937 47.826 0.00 0.00 0.00 4.79
552 568 4.253685 GGATCAATCAAACAAGAGACGGA 58.746 43.478 0.00 0.00 0.00 4.69
563 579 3.132289 ACAAGAGACGGAACAGAACAGAA 59.868 43.478 0.00 0.00 0.00 3.02
564 580 3.372660 AGAGACGGAACAGAACAGAAC 57.627 47.619 0.00 0.00 0.00 3.01
565 581 2.693591 AGAGACGGAACAGAACAGAACA 59.306 45.455 0.00 0.00 0.00 3.18
566 582 3.053455 GAGACGGAACAGAACAGAACAG 58.947 50.000 0.00 0.00 0.00 3.16
594 610 7.066766 ACAGCCTAGCATCTTTCTCATAAAAAG 59.933 37.037 0.00 0.00 35.49 2.27
638 658 1.336440 CATCGCCTCTCTACTGACTGG 59.664 57.143 0.00 0.00 0.00 4.00
645 665 2.357637 CTCTCTACTGACTGGCTGTAGC 59.642 54.545 19.43 0.00 44.28 3.58
898 969 1.451936 GCTCCACACACCACCTTCT 59.548 57.895 0.00 0.00 0.00 2.85
904 975 1.051812 ACACACCACCTTCTCCTCTG 58.948 55.000 0.00 0.00 0.00 3.35
929 1000 4.314440 TGCCTCTGACACCGCACC 62.314 66.667 0.00 0.00 0.00 5.01
932 1003 4.662961 CTCTGACACCGCACCGCA 62.663 66.667 0.00 0.00 0.00 5.69
933 1004 4.961511 TCTGACACCGCACCGCAC 62.962 66.667 0.00 0.00 0.00 5.34
945 1016 3.781307 CCGCACCGGGAATCTCCA 61.781 66.667 6.32 0.00 44.15 3.86
969 1040 8.929746 CCAGCCTTTTGATTTTCTTTTCTAATC 58.070 33.333 0.00 0.00 0.00 1.75
973 1044 8.427774 CCTTTTGATTTTCTTTTCTAATCGTGC 58.572 33.333 0.00 0.00 32.30 5.34
1266 1349 1.202818 AGCAAGGTGAAGGTGAAGGTC 60.203 52.381 0.00 0.00 0.00 3.85
1315 1398 2.625639 AGGAGGGCAAGAAGAAGAAGA 58.374 47.619 0.00 0.00 0.00 2.87
1316 1399 2.982488 AGGAGGGCAAGAAGAAGAAGAA 59.018 45.455 0.00 0.00 0.00 2.52
1317 1400 3.008923 AGGAGGGCAAGAAGAAGAAGAAG 59.991 47.826 0.00 0.00 0.00 2.85
1318 1401 3.342719 GAGGGCAAGAAGAAGAAGAAGG 58.657 50.000 0.00 0.00 0.00 3.46
1319 1402 1.815613 GGGCAAGAAGAAGAAGAAGGC 59.184 52.381 0.00 0.00 0.00 4.35
1320 1403 1.815613 GGCAAGAAGAAGAAGAAGGCC 59.184 52.381 0.00 0.00 0.00 5.19
1321 1404 1.466558 GCAAGAAGAAGAAGAAGGCCG 59.533 52.381 0.00 0.00 0.00 6.13
1322 1405 2.872038 GCAAGAAGAAGAAGAAGGCCGA 60.872 50.000 0.00 0.00 0.00 5.54
1323 1406 2.999355 CAAGAAGAAGAAGAAGGCCGAG 59.001 50.000 0.00 0.00 0.00 4.63
1324 1407 1.552792 AGAAGAAGAAGAAGGCCGAGG 59.447 52.381 0.00 0.00 0.00 4.63
1325 1408 0.035915 AAGAAGAAGAAGGCCGAGGC 60.036 55.000 5.37 5.37 41.06 4.70
1326 1409 1.811679 GAAGAAGAAGGCCGAGGCG 60.812 63.158 8.14 0.00 43.06 5.52
1401 1484 1.756538 GCTGAGGAGAAGAAGGAGGAG 59.243 57.143 0.00 0.00 0.00 3.69
1407 1490 1.219393 GAAGAAGGAGGAGGCGGTG 59.781 63.158 0.00 0.00 0.00 4.94
1408 1491 2.245438 GAAGAAGGAGGAGGCGGTGG 62.245 65.000 0.00 0.00 0.00 4.61
1409 1492 4.475135 GAAGGAGGAGGCGGTGGC 62.475 72.222 0.00 0.00 38.90 5.01
1413 1496 4.154347 GAGGAGGCGGTGGCTGAG 62.154 72.222 0.00 0.00 38.98 3.35
1416 1499 4.154347 GAGGCGGTGGCTGAGGAG 62.154 72.222 0.00 0.00 38.98 3.69
1417 1500 4.704103 AGGCGGTGGCTGAGGAGA 62.704 66.667 0.00 0.00 36.97 3.71
1418 1501 3.706373 GGCGGTGGCTGAGGAGAA 61.706 66.667 0.00 0.00 39.81 2.87
1419 1502 2.125350 GCGGTGGCTGAGGAGAAG 60.125 66.667 0.00 0.00 35.83 2.85
1420 1503 2.581354 CGGTGGCTGAGGAGAAGG 59.419 66.667 0.00 0.00 0.00 3.46
1421 1504 2.286523 CGGTGGCTGAGGAGAAGGT 61.287 63.158 0.00 0.00 0.00 3.50
1428 1511 0.251634 CTGAGGAGAAGGTGGAAGCC 59.748 60.000 0.00 0.00 32.25 4.35
2148 2291 1.204941 CTCTTCCAGGACAACTACCCG 59.795 57.143 0.00 0.00 0.00 5.28
2248 2391 2.151202 TCTGACTGAATTTTCGTGGCC 58.849 47.619 0.00 0.00 0.00 5.36
2250 2393 1.202879 TGACTGAATTTTCGTGGCCCT 60.203 47.619 0.00 0.00 0.00 5.19
2252 2395 1.247567 CTGAATTTTCGTGGCCCTGT 58.752 50.000 0.00 0.00 0.00 4.00
2349 2492 1.239968 GGACCAAGAGCAAGCTGGTG 61.240 60.000 8.92 2.51 32.35 4.17
2352 2495 1.521450 CCAAGAGCAAGCTGGTGGTG 61.521 60.000 0.00 0.00 0.00 4.17
2397 2540 0.811616 CGCTGCTCAAGTACATCCCC 60.812 60.000 0.00 0.00 0.00 4.81
2796 3041 2.347490 GCCCTCGCCAAGAAGTGA 59.653 61.111 0.00 0.00 0.00 3.41
2815 3060 9.381033 AGAAGTGATGAAGAAAGTGATGATAAG 57.619 33.333 0.00 0.00 0.00 1.73
2825 3070 6.995091 AGAAAGTGATGATAAGTTATGAGGCC 59.005 38.462 0.00 0.00 0.00 5.19
2843 3100 3.911719 CCTTTGGAGGGGGAAGATG 57.088 57.895 0.00 0.00 39.55 2.90
2844 3101 1.298953 CCTTTGGAGGGGGAAGATGA 58.701 55.000 0.00 0.00 39.55 2.92
2869 3126 1.069358 TGTGTGCGTGTGGATTCTACA 59.931 47.619 0.00 0.00 0.00 2.74
2870 3127 2.289382 TGTGTGCGTGTGGATTCTACAT 60.289 45.455 6.12 0.00 0.00 2.29
2871 3128 2.742053 GTGTGCGTGTGGATTCTACATT 59.258 45.455 6.12 0.00 0.00 2.71
2872 3129 3.930229 GTGTGCGTGTGGATTCTACATTA 59.070 43.478 6.12 0.00 0.00 1.90
2906 3163 7.566760 TCAATTCTTTTGTGCAAGAGAGTAA 57.433 32.000 5.52 0.00 33.81 2.24
2946 3209 1.106351 TGTGTTTGGCGAGCACCATT 61.106 50.000 17.72 0.00 40.13 3.16
2999 3265 9.925545 AATATAAAGAGGTTTTTACCCGGTTAT 57.074 29.630 0.00 0.00 0.00 1.89
3000 3266 9.925545 ATATAAAGAGGTTTTTACCCGGTTATT 57.074 29.630 0.00 0.00 0.00 1.40
3002 3268 9.752228 ATAAAGAGGTTTTTACCCGGTTATTAA 57.248 29.630 0.00 0.00 0.00 1.40
3003 3269 8.476064 AAAGAGGTTTTTACCCGGTTATTAAA 57.524 30.769 0.00 0.00 0.00 1.52
3004 3270 8.476064 AAGAGGTTTTTACCCGGTTATTAAAA 57.524 30.769 0.00 2.26 0.00 1.52
3005 3271 8.114331 AGAGGTTTTTACCCGGTTATTAAAAG 57.886 34.615 0.00 0.00 0.00 2.27
3007 3273 8.248904 AGGTTTTTACCCGGTTATTAAAAGTT 57.751 30.769 0.00 0.00 0.00 2.66
3008 3274 8.703743 AGGTTTTTACCCGGTTATTAAAAGTTT 58.296 29.630 0.00 0.00 0.00 2.66
3009 3275 8.977505 GGTTTTTACCCGGTTATTAAAAGTTTC 58.022 33.333 0.00 0.00 0.00 2.78
3010 3276 9.748708 GTTTTTACCCGGTTATTAAAAGTTTCT 57.251 29.630 0.00 0.00 0.00 2.52
3011 3277 9.747293 TTTTTACCCGGTTATTAAAAGTTTCTG 57.253 29.630 0.00 0.00 0.00 3.02
3012 3278 5.381174 ACCCGGTTATTAAAAGTTTCTGC 57.619 39.130 0.00 0.00 0.00 4.26
3017 3283 5.648960 CGGTTATTAAAAGTTTCTGCCCCTA 59.351 40.000 0.00 0.00 0.00 3.53
3026 3292 3.333680 AGTTTCTGCCCCTATTTTCCAGA 59.666 43.478 0.00 0.00 0.00 3.86
3032 3298 4.946646 TGCCCCTATTTTCCAGAGAAATT 58.053 39.130 0.00 0.00 41.55 1.82
3059 3325 3.805207 TGAGATTCAGTGAGATGCCATG 58.195 45.455 0.00 0.00 0.00 3.66
3060 3326 3.139850 GAGATTCAGTGAGATGCCATGG 58.860 50.000 7.63 7.63 0.00 3.66
3061 3327 2.158652 AGATTCAGTGAGATGCCATGGG 60.159 50.000 15.13 0.00 0.00 4.00
3076 3342 2.464796 ATGGGCACATGAATGGACAT 57.535 45.000 0.00 0.00 35.57 3.06
3101 3367 4.446413 CCCCCTTTCGACCGTCCG 62.446 72.222 0.00 0.00 0.00 4.79
3102 3368 3.376078 CCCCTTTCGACCGTCCGA 61.376 66.667 0.00 0.00 36.70 4.55
3103 3369 2.718073 CCCCTTTCGACCGTCCGAT 61.718 63.158 0.00 0.00 38.45 4.18
3104 3370 1.217244 CCCTTTCGACCGTCCGATT 59.783 57.895 0.00 0.00 38.45 3.34
3105 3371 1.082117 CCCTTTCGACCGTCCGATTG 61.082 60.000 0.00 0.00 38.45 2.67
3106 3372 0.108992 CCTTTCGACCGTCCGATTGA 60.109 55.000 0.00 0.00 38.45 2.57
3107 3373 1.670674 CCTTTCGACCGTCCGATTGAA 60.671 52.381 0.00 0.00 38.45 2.69
3108 3374 2.063266 CTTTCGACCGTCCGATTGAAA 58.937 47.619 0.00 0.00 38.45 2.69
3109 3375 2.151881 TTCGACCGTCCGATTGAAAA 57.848 45.000 0.00 0.00 38.45 2.29
3110 3376 2.373540 TCGACCGTCCGATTGAAAAT 57.626 45.000 0.00 0.00 33.14 1.82
3111 3377 2.264813 TCGACCGTCCGATTGAAAATC 58.735 47.619 0.00 0.00 33.14 2.17
3112 3378 1.996898 CGACCGTCCGATTGAAAATCA 59.003 47.619 1.30 0.00 0.00 2.57
3113 3379 2.413796 CGACCGTCCGATTGAAAATCAA 59.586 45.455 0.00 0.00 41.09 2.57
3114 3380 3.723835 CGACCGTCCGATTGAAAATCAAC 60.724 47.826 0.00 0.00 39.45 3.18
3115 3381 3.142951 ACCGTCCGATTGAAAATCAACA 58.857 40.909 0.00 0.00 39.45 3.33
3116 3382 3.188460 ACCGTCCGATTGAAAATCAACAG 59.812 43.478 0.00 0.00 39.45 3.16
3117 3383 3.163594 CGTCCGATTGAAAATCAACAGC 58.836 45.455 0.00 0.00 39.45 4.40
3118 3384 3.501950 GTCCGATTGAAAATCAACAGCC 58.498 45.455 0.00 0.00 39.45 4.85
3119 3385 2.491693 TCCGATTGAAAATCAACAGCCC 59.508 45.455 0.00 0.00 39.45 5.19
3120 3386 2.230992 CCGATTGAAAATCAACAGCCCA 59.769 45.455 0.00 0.00 39.45 5.36
3121 3387 3.504863 CGATTGAAAATCAACAGCCCAG 58.495 45.455 0.00 0.00 39.45 4.45
3122 3388 3.191162 CGATTGAAAATCAACAGCCCAGA 59.809 43.478 0.00 0.00 39.45 3.86
3123 3389 4.142315 CGATTGAAAATCAACAGCCCAGAT 60.142 41.667 0.00 0.00 39.45 2.90
3124 3390 4.789012 TTGAAAATCAACAGCCCAGATC 57.211 40.909 0.00 0.00 30.26 2.75
3125 3391 3.765381 TGAAAATCAACAGCCCAGATCA 58.235 40.909 0.00 0.00 0.00 2.92
3126 3392 3.760151 TGAAAATCAACAGCCCAGATCAG 59.240 43.478 0.00 0.00 0.00 2.90
3127 3393 1.760192 AATCAACAGCCCAGATCAGC 58.240 50.000 0.00 0.00 0.00 4.26
3128 3394 0.622136 ATCAACAGCCCAGATCAGCA 59.378 50.000 0.00 0.00 0.00 4.41
3129 3395 0.622136 TCAACAGCCCAGATCAGCAT 59.378 50.000 0.00 0.00 0.00 3.79
3130 3396 0.738975 CAACAGCCCAGATCAGCATG 59.261 55.000 0.00 0.00 37.54 4.06
3141 3407 3.832704 TCAGCATGAACAGTACCCG 57.167 52.632 0.00 0.00 45.97 5.28
3142 3408 0.249120 TCAGCATGAACAGTACCCGG 59.751 55.000 0.00 0.00 45.97 5.73
3143 3409 0.249120 CAGCATGAACAGTACCCGGA 59.751 55.000 0.73 0.00 39.69 5.14
3144 3410 0.249398 AGCATGAACAGTACCCGGAC 59.751 55.000 0.73 0.00 0.00 4.79
3145 3411 0.036765 GCATGAACAGTACCCGGACA 60.037 55.000 0.73 0.00 0.00 4.02
3146 3412 1.722011 CATGAACAGTACCCGGACAC 58.278 55.000 0.73 0.00 0.00 3.67
3147 3413 1.001520 CATGAACAGTACCCGGACACA 59.998 52.381 0.73 0.00 0.00 3.72
3148 3414 1.121378 TGAACAGTACCCGGACACAA 58.879 50.000 0.73 0.00 0.00 3.33
3149 3415 1.202557 TGAACAGTACCCGGACACAAC 60.203 52.381 0.73 0.00 0.00 3.32
3150 3416 1.069668 GAACAGTACCCGGACACAACT 59.930 52.381 0.73 0.00 0.00 3.16
3151 3417 1.999648 ACAGTACCCGGACACAACTA 58.000 50.000 0.73 0.00 0.00 2.24
3155 3421 1.615392 GTACCCGGACACAACTACAGT 59.385 52.381 0.73 0.00 0.00 3.55
3156 3422 1.999648 ACCCGGACACAACTACAGTA 58.000 50.000 0.73 0.00 0.00 2.74
3159 3425 1.891150 CCGGACACAACTACAGTACCT 59.109 52.381 0.00 0.00 0.00 3.08
3169 3435 1.757699 CTACAGTACCTCCTCTTGGCC 59.242 57.143 0.00 0.00 0.00 5.36
3251 3710 5.215239 ACGCATTTTCACCTTTTGTTTTG 57.785 34.783 0.00 0.00 0.00 2.44
3266 3725 7.382218 CCTTTTGTTTTGAGAATCTTTACGCAT 59.618 33.333 0.00 0.00 34.92 4.73
3325 3784 0.030504 TAACGAACGAACACTCCGCA 59.969 50.000 0.14 0.00 0.00 5.69
3326 3785 0.599204 AACGAACGAACACTCCGCAT 60.599 50.000 0.14 0.00 0.00 4.73
3327 3786 1.282248 ACGAACGAACACTCCGCATG 61.282 55.000 0.14 0.00 0.00 4.06
3329 3788 2.240612 GAACGAACACTCCGCATGGC 62.241 60.000 0.00 0.00 34.14 4.40
3330 3789 2.741985 CGAACACTCCGCATGGCA 60.742 61.111 0.00 0.00 34.14 4.92
3331 3790 2.743752 CGAACACTCCGCATGGCAG 61.744 63.158 0.00 0.00 34.14 4.85
3332 3791 1.672356 GAACACTCCGCATGGCAGT 60.672 57.895 0.00 0.00 34.14 4.40
3383 3857 0.831307 GCCCCATTCTTCTCCGTAGT 59.169 55.000 0.00 0.00 0.00 2.73
3387 3861 1.536284 CCATTCTTCTCCGTAGTCGCC 60.536 57.143 0.00 0.00 35.54 5.54
3390 3864 3.753070 CTTCTCCGTAGTCGCCGCC 62.753 68.421 0.00 0.00 35.54 6.13
3412 3900 2.524394 CCCGATCCGATCCCCACT 60.524 66.667 2.69 0.00 0.00 4.00
3441 3933 1.709578 TCACTGCTTGAGGTGAGTCT 58.290 50.000 0.00 0.00 37.52 3.24
3476 3977 3.015332 GCCTCCTCCTCTCCCTCCA 62.015 68.421 0.00 0.00 0.00 3.86
3486 3987 1.231751 TCTCCCTCCAGATCCCAGGT 61.232 60.000 0.00 0.00 0.00 4.00
3489 3990 0.916358 CCCTCCAGATCCCAGGTTGT 60.916 60.000 0.00 0.00 0.00 3.32
3496 3997 2.307098 CAGATCCCAGGTTGTTCTCCTT 59.693 50.000 0.00 0.00 32.37 3.36
3497 3998 2.307098 AGATCCCAGGTTGTTCTCCTTG 59.693 50.000 0.00 0.00 32.37 3.61
3499 4000 1.420138 TCCCAGGTTGTTCTCCTTGTC 59.580 52.381 0.00 0.00 32.37 3.18
3500 4001 1.545651 CCCAGGTTGTTCTCCTTGTCC 60.546 57.143 0.00 0.00 32.37 4.02
3501 4002 1.421646 CCAGGTTGTTCTCCTTGTCCT 59.578 52.381 0.00 0.00 32.37 3.85
3502 4003 2.158608 CCAGGTTGTTCTCCTTGTCCTT 60.159 50.000 0.00 0.00 32.37 3.36
3503 4004 3.072476 CCAGGTTGTTCTCCTTGTCCTTA 59.928 47.826 0.00 0.00 32.37 2.69
3504 4005 4.445735 CCAGGTTGTTCTCCTTGTCCTTAA 60.446 45.833 0.00 0.00 32.37 1.85
3505 4006 5.130350 CAGGTTGTTCTCCTTGTCCTTAAA 58.870 41.667 0.00 0.00 32.37 1.52
3506 4007 5.592688 CAGGTTGTTCTCCTTGTCCTTAAAA 59.407 40.000 0.00 0.00 32.37 1.52
3510 4011 5.445964 TGTTCTCCTTGTCCTTAAAAAGCT 58.554 37.500 0.00 0.00 0.00 3.74
3536 4037 3.323403 CCAGTCCTAGATCTCCATTCCAC 59.677 52.174 0.00 0.00 0.00 4.02
3542 4043 1.209275 GATCTCCATTCCACGCGTCG 61.209 60.000 9.86 1.68 0.00 5.12
3543 4044 2.629050 ATCTCCATTCCACGCGTCGG 62.629 60.000 9.86 15.27 0.00 4.79
3545 4046 4.444838 CCATTCCACGCGTCGGGA 62.445 66.667 21.98 18.47 28.17 5.14
3546 4047 2.202878 CATTCCACGCGTCGGGAT 60.203 61.111 17.94 15.67 32.15 3.85
3547 4048 1.813753 CATTCCACGCGTCGGGATT 60.814 57.895 17.94 12.20 32.15 3.01
3548 4049 1.078708 ATTCCACGCGTCGGGATTT 60.079 52.632 17.94 7.32 32.15 2.17
3549 4050 1.087771 ATTCCACGCGTCGGGATTTC 61.088 55.000 17.94 0.00 32.15 2.17
3554 4063 0.244450 ACGCGTCGGGATTTCACTAA 59.756 50.000 16.98 0.00 0.00 2.24
3603 4116 3.616956 TCTACTTGATGGTGCCTTCAG 57.383 47.619 6.85 5.09 32.87 3.02
3620 4133 6.600822 TGCCTTCAGAATTCTAGATTTTCAGG 59.399 38.462 7.86 11.43 0.00 3.86
3621 4134 6.459435 GCCTTCAGAATTCTAGATTTTCAGGC 60.459 42.308 19.96 19.96 0.00 4.85
3622 4135 6.827762 CCTTCAGAATTCTAGATTTTCAGGCT 59.172 38.462 7.86 0.00 0.00 4.58
3623 4136 7.201714 CCTTCAGAATTCTAGATTTTCAGGCTG 60.202 40.741 8.58 8.58 0.00 4.85
3624 4137 6.950842 TCAGAATTCTAGATTTTCAGGCTGA 58.049 36.000 14.43 14.43 0.00 4.26
3625 4138 7.046652 TCAGAATTCTAGATTTTCAGGCTGAG 58.953 38.462 17.91 4.29 0.00 3.35
3626 4139 6.822676 CAGAATTCTAGATTTTCAGGCTGAGT 59.177 38.462 17.91 8.02 0.00 3.41
3627 4140 7.336427 CAGAATTCTAGATTTTCAGGCTGAGTT 59.664 37.037 17.91 6.47 0.00 3.01
3628 4141 7.887495 AGAATTCTAGATTTTCAGGCTGAGTTT 59.113 33.333 17.91 6.09 0.00 2.66
3629 4142 9.167311 GAATTCTAGATTTTCAGGCTGAGTTTA 57.833 33.333 17.91 0.00 0.00 2.01
3630 4143 7.907214 TTCTAGATTTTCAGGCTGAGTTTAC 57.093 36.000 17.91 9.51 0.00 2.01
3631 4144 6.407202 TCTAGATTTTCAGGCTGAGTTTACC 58.593 40.000 17.91 6.46 0.00 2.85
3632 4145 4.336280 AGATTTTCAGGCTGAGTTTACCC 58.664 43.478 17.91 4.97 0.00 3.69
3633 4146 3.586470 TTTTCAGGCTGAGTTTACCCA 57.414 42.857 17.91 0.00 0.00 4.51
3634 4147 2.561478 TTCAGGCTGAGTTTACCCAC 57.439 50.000 17.91 0.00 0.00 4.61
3635 4148 1.729586 TCAGGCTGAGTTTACCCACT 58.270 50.000 14.43 0.00 0.00 4.00
3636 4149 1.347707 TCAGGCTGAGTTTACCCACTG 59.652 52.381 14.43 0.00 0.00 3.66
3637 4150 1.072331 CAGGCTGAGTTTACCCACTGT 59.928 52.381 9.42 0.00 0.00 3.55
3638 4151 2.301870 CAGGCTGAGTTTACCCACTGTA 59.698 50.000 9.42 0.00 0.00 2.74
3639 4152 2.976882 AGGCTGAGTTTACCCACTGTAA 59.023 45.455 0.00 0.00 37.65 2.41
3640 4153 3.072211 GGCTGAGTTTACCCACTGTAAC 58.928 50.000 0.00 0.00 39.13 2.50
3641 4154 3.244457 GGCTGAGTTTACCCACTGTAACT 60.244 47.826 0.00 0.00 39.13 2.24
3642 4155 4.386711 GCTGAGTTTACCCACTGTAACTT 58.613 43.478 0.00 0.00 39.13 2.66
3643 4156 4.213482 GCTGAGTTTACCCACTGTAACTTG 59.787 45.833 0.00 0.00 39.13 3.16
3644 4157 4.710324 TGAGTTTACCCACTGTAACTTGG 58.290 43.478 0.00 0.00 39.13 3.61
3645 4158 4.164604 TGAGTTTACCCACTGTAACTTGGT 59.835 41.667 0.00 0.00 39.13 3.67
3646 4159 5.120054 AGTTTACCCACTGTAACTTGGTT 57.880 39.130 0.00 0.00 39.13 3.67
3647 4160 6.126825 TGAGTTTACCCACTGTAACTTGGTTA 60.127 38.462 0.00 0.00 39.13 2.85
3648 4161 6.661777 AGTTTACCCACTGTAACTTGGTTAA 58.338 36.000 0.00 0.00 39.13 2.01
3649 4162 6.543465 AGTTTACCCACTGTAACTTGGTTAAC 59.457 38.462 0.00 0.00 39.13 2.01
3650 4163 3.469739 ACCCACTGTAACTTGGTTAACG 58.530 45.455 0.00 0.00 29.42 3.18
3651 4164 3.134442 ACCCACTGTAACTTGGTTAACGA 59.866 43.478 0.00 0.00 29.42 3.85
3652 4165 4.128643 CCCACTGTAACTTGGTTAACGAA 58.871 43.478 2.91 2.91 29.42 3.85
3653 4166 4.024641 CCCACTGTAACTTGGTTAACGAAC 60.025 45.833 0.00 0.00 29.42 3.95
3654 4167 4.571580 CCACTGTAACTTGGTTAACGAACA 59.428 41.667 0.00 0.00 37.29 3.18
3655 4168 5.237779 CCACTGTAACTTGGTTAACGAACAT 59.762 40.000 0.00 0.00 37.29 2.71
3656 4169 6.133392 CACTGTAACTTGGTTAACGAACATG 58.867 40.000 0.00 0.00 37.29 3.21
3657 4170 5.818857 ACTGTAACTTGGTTAACGAACATGT 59.181 36.000 0.00 0.00 37.29 3.21
3658 4171 6.018507 ACTGTAACTTGGTTAACGAACATGTC 60.019 38.462 0.00 0.00 37.29 3.06
3659 4172 4.823790 AACTTGGTTAACGAACATGTCC 57.176 40.909 0.00 0.00 37.29 4.02
3660 4173 4.081322 ACTTGGTTAACGAACATGTCCT 57.919 40.909 0.00 0.00 37.29 3.85
3661 4174 4.062991 ACTTGGTTAACGAACATGTCCTC 58.937 43.478 0.00 0.00 37.29 3.71
3662 4175 2.679450 TGGTTAACGAACATGTCCTCG 58.321 47.619 16.40 16.40 40.87 4.63
3663 4176 1.997606 GGTTAACGAACATGTCCTCGG 59.002 52.381 20.69 6.42 39.38 4.63
3664 4177 2.611224 GGTTAACGAACATGTCCTCGGT 60.611 50.000 20.69 17.72 39.38 4.69
3665 4178 3.062042 GTTAACGAACATGTCCTCGGTT 58.938 45.455 20.69 14.93 39.38 4.44
3666 4179 2.249844 AACGAACATGTCCTCGGTTT 57.750 45.000 20.69 7.26 39.38 3.27
3667 4180 2.249844 ACGAACATGTCCTCGGTTTT 57.750 45.000 20.69 0.87 39.38 2.43
3668 4181 2.567985 ACGAACATGTCCTCGGTTTTT 58.432 42.857 20.69 0.54 39.38 1.94
3669 4182 2.546789 ACGAACATGTCCTCGGTTTTTC 59.453 45.455 20.69 1.49 39.38 2.29
3670 4183 2.806244 CGAACATGTCCTCGGTTTTTCT 59.194 45.455 11.32 0.00 0.00 2.52
3671 4184 3.250040 CGAACATGTCCTCGGTTTTTCTT 59.750 43.478 11.32 0.00 0.00 2.52
3672 4185 4.537015 GAACATGTCCTCGGTTTTTCTTG 58.463 43.478 0.00 0.00 0.00 3.02
3673 4186 3.551846 ACATGTCCTCGGTTTTTCTTGT 58.448 40.909 0.00 0.00 0.00 3.16
3674 4187 3.951680 ACATGTCCTCGGTTTTTCTTGTT 59.048 39.130 0.00 0.00 0.00 2.83
3675 4188 4.401202 ACATGTCCTCGGTTTTTCTTGTTT 59.599 37.500 0.00 0.00 0.00 2.83
3676 4189 4.364415 TGTCCTCGGTTTTTCTTGTTTG 57.636 40.909 0.00 0.00 0.00 2.93
3677 4190 4.011023 TGTCCTCGGTTTTTCTTGTTTGA 58.989 39.130 0.00 0.00 0.00 2.69
3678 4191 4.642885 TGTCCTCGGTTTTTCTTGTTTGAT 59.357 37.500 0.00 0.00 0.00 2.57
3679 4192 5.126384 TGTCCTCGGTTTTTCTTGTTTGATT 59.874 36.000 0.00 0.00 0.00 2.57
3680 4193 6.040247 GTCCTCGGTTTTTCTTGTTTGATTT 58.960 36.000 0.00 0.00 0.00 2.17
3681 4194 6.198403 GTCCTCGGTTTTTCTTGTTTGATTTC 59.802 38.462 0.00 0.00 0.00 2.17
3682 4195 6.096282 TCCTCGGTTTTTCTTGTTTGATTTCT 59.904 34.615 0.00 0.00 0.00 2.52
3683 4196 6.756542 CCTCGGTTTTTCTTGTTTGATTTCTT 59.243 34.615 0.00 0.00 0.00 2.52
3684 4197 7.043391 CCTCGGTTTTTCTTGTTTGATTTCTTC 60.043 37.037 0.00 0.00 0.00 2.87
3685 4198 6.754675 TCGGTTTTTCTTGTTTGATTTCTTCC 59.245 34.615 0.00 0.00 0.00 3.46
3686 4199 6.291585 CGGTTTTTCTTGTTTGATTTCTTCCG 60.292 38.462 0.00 0.00 0.00 4.30
3687 4200 6.754675 GGTTTTTCTTGTTTGATTTCTTCCGA 59.245 34.615 0.00 0.00 0.00 4.55
3688 4201 7.276878 GGTTTTTCTTGTTTGATTTCTTCCGAA 59.723 33.333 0.00 0.00 0.00 4.30
3689 4202 8.817100 GTTTTTCTTGTTTGATTTCTTCCGAAT 58.183 29.630 0.00 0.00 0.00 3.34
3690 4203 8.940768 TTTTCTTGTTTGATTTCTTCCGAATT 57.059 26.923 0.00 0.00 0.00 2.17
3691 4204 8.940768 TTTCTTGTTTGATTTCTTCCGAATTT 57.059 26.923 0.00 0.00 0.00 1.82
3692 4205 8.940768 TTCTTGTTTGATTTCTTCCGAATTTT 57.059 26.923 0.00 0.00 0.00 1.82
3693 4206 8.940768 TCTTGTTTGATTTCTTCCGAATTTTT 57.059 26.923 0.00 0.00 0.00 1.94
3747 4260 9.807649 AGTTAATAATGGTTTGATGATTTGAGC 57.192 29.630 0.00 0.00 0.00 4.26
3748 4261 9.807649 GTTAATAATGGTTTGATGATTTGAGCT 57.192 29.630 0.00 0.00 0.00 4.09
3751 4264 9.729281 AATAATGGTTTGATGATTTGAGCTTTT 57.271 25.926 0.00 0.00 0.00 2.27
3752 4265 7.662604 AATGGTTTGATGATTTGAGCTTTTC 57.337 32.000 0.00 0.00 0.00 2.29
3753 4266 6.409524 TGGTTTGATGATTTGAGCTTTTCT 57.590 33.333 0.00 0.00 0.00 2.52
3754 4267 6.819284 TGGTTTGATGATTTGAGCTTTTCTT 58.181 32.000 0.00 0.00 0.00 2.52
3755 4268 6.702723 TGGTTTGATGATTTGAGCTTTTCTTG 59.297 34.615 0.00 0.00 0.00 3.02
3756 4269 6.703165 GGTTTGATGATTTGAGCTTTTCTTGT 59.297 34.615 0.00 0.00 0.00 3.16
3757 4270 7.095899 GGTTTGATGATTTGAGCTTTTCTTGTC 60.096 37.037 0.00 0.00 0.00 3.18
3758 4271 5.692814 TGATGATTTGAGCTTTTCTTGTCG 58.307 37.500 0.00 0.00 0.00 4.35
3759 4272 5.469760 TGATGATTTGAGCTTTTCTTGTCGA 59.530 36.000 0.00 0.00 0.00 4.20
3760 4273 5.095691 TGATTTGAGCTTTTCTTGTCGAC 57.904 39.130 9.11 9.11 0.00 4.20
3761 4274 4.816385 TGATTTGAGCTTTTCTTGTCGACT 59.184 37.500 17.92 0.00 0.00 4.18
3762 4275 4.795970 TTTGAGCTTTTCTTGTCGACTC 57.204 40.909 17.92 2.88 0.00 3.36
3763 4276 3.452755 TGAGCTTTTCTTGTCGACTCA 57.547 42.857 17.92 5.69 0.00 3.41
3764 4277 3.995199 TGAGCTTTTCTTGTCGACTCAT 58.005 40.909 17.92 0.00 0.00 2.90
3765 4278 3.742882 TGAGCTTTTCTTGTCGACTCATG 59.257 43.478 17.92 4.37 0.00 3.07
3766 4279 3.990469 GAGCTTTTCTTGTCGACTCATGA 59.010 43.478 17.92 6.69 0.00 3.07
3767 4280 4.573900 AGCTTTTCTTGTCGACTCATGAT 58.426 39.130 17.92 0.00 0.00 2.45
3768 4281 4.999950 AGCTTTTCTTGTCGACTCATGATT 59.000 37.500 17.92 0.00 0.00 2.57
3769 4282 5.121454 AGCTTTTCTTGTCGACTCATGATTC 59.879 40.000 17.92 0.00 0.00 2.52
3770 4283 5.106948 GCTTTTCTTGTCGACTCATGATTCA 60.107 40.000 17.92 0.00 0.00 2.57
3771 4284 6.471976 TTTTCTTGTCGACTCATGATTCAG 57.528 37.500 17.92 6.30 0.00 3.02
3772 4285 4.790765 TCTTGTCGACTCATGATTCAGT 57.209 40.909 17.92 0.00 0.00 3.41
3773 4286 4.488879 TCTTGTCGACTCATGATTCAGTG 58.511 43.478 17.92 0.00 0.00 3.66
3774 4287 4.218417 TCTTGTCGACTCATGATTCAGTGA 59.782 41.667 17.92 0.00 0.00 3.41
3775 4288 4.102035 TGTCGACTCATGATTCAGTGAG 57.898 45.455 17.92 17.35 45.65 3.51
3784 4297 2.179427 TGATTCAGTGAGTCCACGGAT 58.821 47.619 12.62 0.00 44.62 4.18
3785 4298 2.567169 TGATTCAGTGAGTCCACGGATT 59.433 45.455 12.62 0.00 44.62 3.01
3786 4299 2.455674 TTCAGTGAGTCCACGGATTG 57.544 50.000 0.00 0.00 44.62 2.67
3787 4300 1.001974 TTCAGTGAGTCCACGGATTGG 59.998 52.381 0.00 0.00 44.62 3.16
3788 4301 1.021390 CAGTGAGTCCACGGATTGGC 61.021 60.000 0.00 0.00 46.47 4.52
3789 4302 2.100631 GTGAGTCCACGGATTGGCG 61.101 63.158 0.00 0.00 46.47 5.69
3790 4303 2.264794 GAGTCCACGGATTGGCGT 59.735 61.111 0.00 0.00 46.47 5.68
3791 4304 2.047274 AGTCCACGGATTGGCGTG 60.047 61.111 0.00 0.00 46.47 5.34
3792 4305 3.799755 GTCCACGGATTGGCGTGC 61.800 66.667 0.00 0.00 46.47 5.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 13 4.211794 GGTTTTGATACCGACGAACAGAAA 59.788 41.667 0.00 0.00 0.00 2.52
12 14 3.742369 GGTTTTGATACCGACGAACAGAA 59.258 43.478 0.00 0.00 0.00 3.02
15 17 2.801679 GTGGTTTTGATACCGACGAACA 59.198 45.455 0.00 0.00 41.28 3.18
66 68 1.376683 TGGTGCATTGTCTACCGCC 60.377 57.895 0.00 0.00 37.29 6.13
68 70 1.078709 CAGTGGTGCATTGTCTACCG 58.921 55.000 0.00 0.00 37.29 4.02
69 71 2.472695 TCAGTGGTGCATTGTCTACC 57.527 50.000 0.00 0.00 35.05 3.18
70 72 3.426695 GCATTCAGTGGTGCATTGTCTAC 60.427 47.826 14.11 0.00 40.94 2.59
74 77 1.330234 TGCATTCAGTGGTGCATTGT 58.670 45.000 16.73 0.00 45.60 2.71
86 89 8.695456 TCATAGTCTAAGATTACTGTGCATTCA 58.305 33.333 0.00 0.00 35.51 2.57
107 110 4.717877 TGGGCCAAGTCATATGTTCATAG 58.282 43.478 2.13 0.00 0.00 2.23
128 131 2.328099 GCAGGCGTCCTTTGTCCTG 61.328 63.158 2.94 2.94 46.63 3.86
136 139 1.675641 GATTTGTGGCAGGCGTCCT 60.676 57.895 0.00 0.00 0.00 3.85
147 150 2.428171 CTGGGTTGGCCTATGATTTGTG 59.572 50.000 3.32 0.00 34.45 3.33
148 151 2.311542 TCTGGGTTGGCCTATGATTTGT 59.688 45.455 3.32 0.00 34.45 2.83
173 176 2.617274 GCGAAGGAACAGGTGCACC 61.617 63.158 29.22 29.22 0.00 5.01
175 178 2.281484 GGCGAAGGAACAGGTGCA 60.281 61.111 0.00 0.00 0.00 4.57
204 207 8.212317 AGTAGGAACAAGTACGCTTTTAAAAA 57.788 30.769 1.66 0.00 31.49 1.94
205 208 7.790823 AGTAGGAACAAGTACGCTTTTAAAA 57.209 32.000 0.00 0.00 31.49 1.52
206 209 8.143835 AGTAGTAGGAACAAGTACGCTTTTAAA 58.856 33.333 0.00 0.00 31.49 1.52
207 210 7.661040 AGTAGTAGGAACAAGTACGCTTTTAA 58.339 34.615 0.00 0.00 31.49 1.52
208 211 7.219484 AGTAGTAGGAACAAGTACGCTTTTA 57.781 36.000 0.00 0.00 31.49 1.52
209 212 6.094193 AGTAGTAGGAACAAGTACGCTTTT 57.906 37.500 0.00 0.00 31.49 2.27
210 213 5.718724 AGTAGTAGGAACAAGTACGCTTT 57.281 39.130 0.00 0.00 31.49 3.51
211 214 5.242393 TGAAGTAGTAGGAACAAGTACGCTT 59.758 40.000 0.00 0.00 34.82 4.68
212 215 4.763793 TGAAGTAGTAGGAACAAGTACGCT 59.236 41.667 0.00 0.00 0.00 5.07
213 216 5.051891 TGAAGTAGTAGGAACAAGTACGC 57.948 43.478 0.00 0.00 0.00 4.42
214 217 9.630098 TTAATTGAAGTAGTAGGAACAAGTACG 57.370 33.333 0.00 0.00 0.00 3.67
219 222 9.629878 TGGTTTTAATTGAAGTAGTAGGAACAA 57.370 29.630 0.00 0.00 0.00 2.83
220 223 9.280174 CTGGTTTTAATTGAAGTAGTAGGAACA 57.720 33.333 0.00 0.00 0.00 3.18
221 224 8.235226 GCTGGTTTTAATTGAAGTAGTAGGAAC 58.765 37.037 0.00 0.00 0.00 3.62
222 225 7.940137 TGCTGGTTTTAATTGAAGTAGTAGGAA 59.060 33.333 0.00 0.00 0.00 3.36
223 226 7.389607 GTGCTGGTTTTAATTGAAGTAGTAGGA 59.610 37.037 0.00 0.00 0.00 2.94
224 227 7.361799 GGTGCTGGTTTTAATTGAAGTAGTAGG 60.362 40.741 0.00 0.00 0.00 3.18
225 228 7.174253 TGGTGCTGGTTTTAATTGAAGTAGTAG 59.826 37.037 0.00 0.00 0.00 2.57
226 229 6.999272 TGGTGCTGGTTTTAATTGAAGTAGTA 59.001 34.615 0.00 0.00 0.00 1.82
227 230 5.830991 TGGTGCTGGTTTTAATTGAAGTAGT 59.169 36.000 0.00 0.00 0.00 2.73
228 231 6.149633 GTGGTGCTGGTTTTAATTGAAGTAG 58.850 40.000 0.00 0.00 0.00 2.57
229 232 5.010213 GGTGGTGCTGGTTTTAATTGAAGTA 59.990 40.000 0.00 0.00 0.00 2.24
230 233 4.202212 GGTGGTGCTGGTTTTAATTGAAGT 60.202 41.667 0.00 0.00 0.00 3.01
231 234 4.039124 AGGTGGTGCTGGTTTTAATTGAAG 59.961 41.667 0.00 0.00 0.00 3.02
232 235 3.964031 AGGTGGTGCTGGTTTTAATTGAA 59.036 39.130 0.00 0.00 0.00 2.69
233 236 3.571590 AGGTGGTGCTGGTTTTAATTGA 58.428 40.909 0.00 0.00 0.00 2.57
234 237 3.306019 GGAGGTGGTGCTGGTTTTAATTG 60.306 47.826 0.00 0.00 0.00 2.32
235 238 2.897326 GGAGGTGGTGCTGGTTTTAATT 59.103 45.455 0.00 0.00 0.00 1.40
236 239 2.110011 AGGAGGTGGTGCTGGTTTTAAT 59.890 45.455 0.00 0.00 0.00 1.40
237 240 1.497286 AGGAGGTGGTGCTGGTTTTAA 59.503 47.619 0.00 0.00 0.00 1.52
238 241 1.145571 AGGAGGTGGTGCTGGTTTTA 58.854 50.000 0.00 0.00 0.00 1.52
239 242 0.261696 AAGGAGGTGGTGCTGGTTTT 59.738 50.000 0.00 0.00 0.00 2.43
240 243 0.468029 CAAGGAGGTGGTGCTGGTTT 60.468 55.000 0.00 0.00 0.00 3.27
241 244 1.151450 CAAGGAGGTGGTGCTGGTT 59.849 57.895 0.00 0.00 0.00 3.67
242 245 2.839098 CAAGGAGGTGGTGCTGGT 59.161 61.111 0.00 0.00 0.00 4.00
243 246 2.674380 GCAAGGAGGTGGTGCTGG 60.674 66.667 0.00 0.00 35.36 4.85
244 247 1.303888 ATGCAAGGAGGTGGTGCTG 60.304 57.895 0.00 0.00 39.09 4.41
245 248 1.303888 CATGCAAGGAGGTGGTGCT 60.304 57.895 0.00 0.00 39.09 4.40
246 249 2.998279 GCATGCAAGGAGGTGGTGC 61.998 63.158 14.21 0.00 38.78 5.01
247 250 0.968901 ATGCATGCAAGGAGGTGGTG 60.969 55.000 26.68 0.00 0.00 4.17
248 251 0.251922 AATGCATGCAAGGAGGTGGT 60.252 50.000 26.68 0.80 0.00 4.16
249 252 0.899720 AAATGCATGCAAGGAGGTGG 59.100 50.000 26.68 0.00 0.00 4.61
250 253 1.546923 TGAAATGCATGCAAGGAGGTG 59.453 47.619 26.68 0.00 0.00 4.00
251 254 1.927487 TGAAATGCATGCAAGGAGGT 58.073 45.000 26.68 3.45 0.00 3.85
252 255 3.536956 AATGAAATGCATGCAAGGAGG 57.463 42.857 26.68 0.00 37.28 4.30
253 256 4.755411 AGAAATGAAATGCATGCAAGGAG 58.245 39.130 26.68 0.00 37.28 3.69
254 257 4.382254 GGAGAAATGAAATGCATGCAAGGA 60.382 41.667 26.68 9.50 37.28 3.36
255 258 3.869246 GGAGAAATGAAATGCATGCAAGG 59.131 43.478 26.68 0.00 37.28 3.61
256 259 4.500127 TGGAGAAATGAAATGCATGCAAG 58.500 39.130 26.68 0.00 37.28 4.01
257 260 4.500127 CTGGAGAAATGAAATGCATGCAA 58.500 39.130 26.68 8.62 37.28 4.08
258 261 3.677700 GCTGGAGAAATGAAATGCATGCA 60.678 43.478 25.04 25.04 37.28 3.96
259 262 2.864343 GCTGGAGAAATGAAATGCATGC 59.136 45.455 11.82 11.82 37.28 4.06
260 263 4.386867 AGCTGGAGAAATGAAATGCATG 57.613 40.909 0.00 0.00 37.28 4.06
261 264 4.755411 CAAGCTGGAGAAATGAAATGCAT 58.245 39.130 0.00 0.00 39.43 3.96
262 265 3.615592 GCAAGCTGGAGAAATGAAATGCA 60.616 43.478 0.00 0.00 0.00 3.96
263 266 2.928116 GCAAGCTGGAGAAATGAAATGC 59.072 45.455 0.00 0.00 0.00 3.56
264 267 4.182693 TGCAAGCTGGAGAAATGAAATG 57.817 40.909 0.00 0.00 0.00 2.32
265 268 4.877378 TTGCAAGCTGGAGAAATGAAAT 57.123 36.364 0.00 0.00 0.00 2.17
266 269 4.877378 ATTGCAAGCTGGAGAAATGAAA 57.123 36.364 4.94 0.00 0.00 2.69
267 270 4.877378 AATTGCAAGCTGGAGAAATGAA 57.123 36.364 4.94 0.00 0.00 2.57
268 271 4.142315 GCTAATTGCAAGCTGGAGAAATGA 60.142 41.667 4.94 0.00 42.31 2.57
269 272 4.110482 GCTAATTGCAAGCTGGAGAAATG 58.890 43.478 4.94 0.00 42.31 2.32
270 273 4.382345 GCTAATTGCAAGCTGGAGAAAT 57.618 40.909 4.94 0.00 42.31 2.17
271 274 3.855689 GCTAATTGCAAGCTGGAGAAA 57.144 42.857 4.94 0.00 42.31 2.52
298 301 2.403378 GCGGCGCCTTGTTTATGGA 61.403 57.895 26.68 0.00 0.00 3.41
305 308 3.051392 GCAATTAGCGGCGCCTTGT 62.051 57.895 30.40 13.01 0.00 3.16
320 323 8.541312 CGCATTATGAAATTTATGTCATTGCAA 58.459 29.630 15.02 0.00 37.64 4.08
345 348 1.468985 TAATGCCAATGGGGTTCACG 58.531 50.000 0.00 0.00 39.65 4.35
349 352 5.713760 AATTTCATAATGCCAATGGGGTT 57.286 34.783 0.00 0.00 39.65 4.11
350 353 5.713760 AAATTTCATAATGCCAATGGGGT 57.286 34.783 0.00 0.00 39.65 4.95
351 354 8.694581 AAATAAATTTCATAATGCCAATGGGG 57.305 30.769 0.00 0.00 40.85 4.96
368 371 9.794719 GCTAGTCTAGGGGTTATGAAATAAATT 57.205 33.333 8.97 0.00 41.12 1.82
369 372 8.945193 TGCTAGTCTAGGGGTTATGAAATAAAT 58.055 33.333 8.97 0.00 41.12 1.40
370 373 8.326765 TGCTAGTCTAGGGGTTATGAAATAAA 57.673 34.615 8.97 0.00 41.12 1.40
371 374 7.924358 TGCTAGTCTAGGGGTTATGAAATAA 57.076 36.000 8.97 0.00 36.20 1.40
372 375 7.787904 TCTTGCTAGTCTAGGGGTTATGAAATA 59.212 37.037 8.97 0.00 0.00 1.40
373 376 6.615726 TCTTGCTAGTCTAGGGGTTATGAAAT 59.384 38.462 8.97 0.00 0.00 2.17
374 377 5.962031 TCTTGCTAGTCTAGGGGTTATGAAA 59.038 40.000 8.97 0.00 0.00 2.69
375 378 5.525484 TCTTGCTAGTCTAGGGGTTATGAA 58.475 41.667 8.97 0.00 0.00 2.57
376 379 5.138758 TCTTGCTAGTCTAGGGGTTATGA 57.861 43.478 8.97 0.00 0.00 2.15
377 380 5.128827 TGTTCTTGCTAGTCTAGGGGTTATG 59.871 44.000 8.97 0.00 0.00 1.90
378 381 5.278061 TGTTCTTGCTAGTCTAGGGGTTAT 58.722 41.667 8.97 0.00 0.00 1.89
379 382 4.680407 TGTTCTTGCTAGTCTAGGGGTTA 58.320 43.478 8.97 0.00 0.00 2.85
380 383 3.517612 TGTTCTTGCTAGTCTAGGGGTT 58.482 45.455 8.97 0.00 0.00 4.11
381 384 3.185880 TGTTCTTGCTAGTCTAGGGGT 57.814 47.619 8.97 0.00 0.00 4.95
382 385 3.769844 TCTTGTTCTTGCTAGTCTAGGGG 59.230 47.826 8.97 0.00 0.00 4.79
383 386 5.407407 TTCTTGTTCTTGCTAGTCTAGGG 57.593 43.478 8.97 0.00 0.00 3.53
415 418 2.481276 GGGCGTTCTTGTTCTTGCTTTT 60.481 45.455 0.00 0.00 0.00 2.27
426 438 1.572085 CTGACAGCAGGGCGTTCTTG 61.572 60.000 0.00 0.00 38.51 3.02
456 468 2.403132 GACTGGGTGACTGCCAGCTT 62.403 60.000 7.66 0.00 42.62 3.74
463 475 8.511604 AATAAATAAATCTGACTGGGTGACTG 57.488 34.615 0.00 0.00 0.00 3.51
483 495 8.915036 TCCCTTTACTTGCTGTTGTTAAATAAA 58.085 29.630 0.00 0.00 0.00 1.40
485 497 7.308109 CGTCCCTTTACTTGCTGTTGTTAAATA 60.308 37.037 0.00 0.00 0.00 1.40
488 500 4.273969 CGTCCCTTTACTTGCTGTTGTTAA 59.726 41.667 0.00 0.00 0.00 2.01
489 501 3.810941 CGTCCCTTTACTTGCTGTTGTTA 59.189 43.478 0.00 0.00 0.00 2.41
490 502 2.616842 CGTCCCTTTACTTGCTGTTGTT 59.383 45.455 0.00 0.00 0.00 2.83
492 504 1.535462 CCGTCCCTTTACTTGCTGTTG 59.465 52.381 0.00 0.00 0.00 3.33
493 505 1.544759 CCCGTCCCTTTACTTGCTGTT 60.545 52.381 0.00 0.00 0.00 3.16
494 506 0.036306 CCCGTCCCTTTACTTGCTGT 59.964 55.000 0.00 0.00 0.00 4.40
495 507 1.305930 GCCCGTCCCTTTACTTGCTG 61.306 60.000 0.00 0.00 0.00 4.41
496 508 1.002502 GCCCGTCCCTTTACTTGCT 60.003 57.895 0.00 0.00 0.00 3.91
497 509 2.044555 GGCCCGTCCCTTTACTTGC 61.045 63.158 0.00 0.00 0.00 4.01
531 543 5.179368 TGTTCCGTCTCTTGTTTGATTGATC 59.821 40.000 0.00 0.00 0.00 2.92
548 564 3.195661 GTTCTGTTCTGTTCTGTTCCGT 58.804 45.455 0.00 0.00 0.00 4.69
549 565 3.194861 TGTTCTGTTCTGTTCTGTTCCG 58.805 45.455 0.00 0.00 0.00 4.30
551 567 3.002759 GGCTGTTCTGTTCTGTTCTGTTC 59.997 47.826 0.00 0.00 0.00 3.18
552 568 2.945668 GGCTGTTCTGTTCTGTTCTGTT 59.054 45.455 0.00 0.00 0.00 3.16
563 579 3.262915 AGAAAGATGCTAGGCTGTTCTGT 59.737 43.478 0.00 0.00 0.00 3.41
564 580 3.870419 GAGAAAGATGCTAGGCTGTTCTG 59.130 47.826 0.00 0.00 0.00 3.02
565 581 3.517100 TGAGAAAGATGCTAGGCTGTTCT 59.483 43.478 0.00 0.00 0.00 3.01
566 582 3.866651 TGAGAAAGATGCTAGGCTGTTC 58.133 45.455 0.00 0.00 0.00 3.18
621 641 1.034838 AGCCAGTCAGTAGAGAGGCG 61.035 60.000 0.00 0.00 45.07 5.52
649 669 4.544689 CTCTCTCGCCGCTGGACG 62.545 72.222 0.00 2.72 43.15 4.79
650 670 4.863925 GCTCTCTCGCCGCTGGAC 62.864 72.222 0.00 0.00 0.00 4.02
929 1000 2.202932 CTGGAGATTCCCGGTGCG 60.203 66.667 0.00 0.00 35.03 5.34
930 1001 2.514824 GCTGGAGATTCCCGGTGC 60.515 66.667 0.00 0.00 35.03 5.01
931 1002 1.915078 AAGGCTGGAGATTCCCGGTG 61.915 60.000 0.00 0.00 35.03 4.94
932 1003 1.208165 AAAGGCTGGAGATTCCCGGT 61.208 55.000 0.00 0.00 35.03 5.28
933 1004 0.034089 AAAAGGCTGGAGATTCCCGG 60.034 55.000 0.00 0.00 35.03 5.73
934 1005 1.098050 CAAAAGGCTGGAGATTCCCG 58.902 55.000 0.00 0.00 35.03 5.14
935 1006 2.514458 TCAAAAGGCTGGAGATTCCC 57.486 50.000 0.00 0.00 35.03 3.97
945 1016 8.360390 ACGATTAGAAAAGAAAATCAAAAGGCT 58.640 29.630 0.00 0.00 31.37 4.58
969 1040 1.800805 ACAGAGGATTTCACAGCACG 58.199 50.000 0.00 0.00 0.00 5.34
973 1044 5.390251 CGATCAACAACAGAGGATTTCACAG 60.390 44.000 0.00 0.00 0.00 3.66
1050 1133 4.697756 TTCGCGCCCACCTCCTTG 62.698 66.667 0.00 0.00 0.00 3.61
1266 1349 0.107945 CCTCCTTCTTCTTGGCCTCG 60.108 60.000 3.32 0.00 0.00 4.63
1321 1404 4.214327 CTTCTCCTCGGCCGCCTC 62.214 72.222 23.51 0.00 0.00 4.70
1322 1405 4.761058 TCTTCTCCTCGGCCGCCT 62.761 66.667 23.51 0.00 0.00 5.52
1323 1406 3.724914 CTTCTTCTCCTCGGCCGCC 62.725 68.421 23.51 0.00 0.00 6.13
1324 1407 2.202810 CTTCTTCTCCTCGGCCGC 60.203 66.667 23.51 0.00 0.00 6.53
1325 1408 2.010582 CTCCTTCTTCTCCTCGGCCG 62.011 65.000 22.12 22.12 0.00 6.13
1326 1409 1.681486 CCTCCTTCTTCTCCTCGGCC 61.681 65.000 0.00 0.00 0.00 6.13
1401 1484 3.672295 CTTCTCCTCAGCCACCGCC 62.672 68.421 0.00 0.00 34.57 6.13
1407 1490 0.251634 CTTCCACCTTCTCCTCAGCC 59.748 60.000 0.00 0.00 0.00 4.85
1408 1491 0.392327 GCTTCCACCTTCTCCTCAGC 60.392 60.000 0.00 0.00 0.00 4.26
1409 1492 0.251634 GGCTTCCACCTTCTCCTCAG 59.748 60.000 0.00 0.00 0.00 3.35
1410 1493 1.544825 CGGCTTCCACCTTCTCCTCA 61.545 60.000 0.00 0.00 0.00 3.86
1411 1494 1.219393 CGGCTTCCACCTTCTCCTC 59.781 63.158 0.00 0.00 0.00 3.71
1412 1495 2.294078 CCGGCTTCCACCTTCTCCT 61.294 63.158 0.00 0.00 0.00 3.69
1413 1496 2.269241 CCGGCTTCCACCTTCTCC 59.731 66.667 0.00 0.00 0.00 3.71
1414 1497 1.376037 CACCGGCTTCCACCTTCTC 60.376 63.158 0.00 0.00 0.00 2.87
1415 1498 1.831652 CTCACCGGCTTCCACCTTCT 61.832 60.000 0.00 0.00 0.00 2.85
1416 1499 1.376037 CTCACCGGCTTCCACCTTC 60.376 63.158 0.00 0.00 0.00 3.46
1417 1500 2.750350 CTCACCGGCTTCCACCTT 59.250 61.111 0.00 0.00 0.00 3.50
1418 1501 3.322466 CCTCACCGGCTTCCACCT 61.322 66.667 0.00 0.00 0.00 4.00
1419 1502 3.316573 CTCCTCACCGGCTTCCACC 62.317 68.421 0.00 0.00 0.00 4.61
1420 1503 1.827399 TTCTCCTCACCGGCTTCCAC 61.827 60.000 0.00 0.00 0.00 4.02
1421 1504 1.535444 TTCTCCTCACCGGCTTCCA 60.535 57.895 0.00 0.00 0.00 3.53
1428 1511 2.165437 CTCCTCTTTCTTCTCCTCACCG 59.835 54.545 0.00 0.00 0.00 4.94
2248 2391 1.812922 GGATCTGCAGCACGACAGG 60.813 63.158 9.47 0.00 34.57 4.00
2250 2393 1.079612 CAGGATCTGCAGCACGACA 60.080 57.895 9.47 0.00 0.00 4.35
2252 2395 0.103755 GATCAGGATCTGCAGCACGA 59.896 55.000 9.47 1.12 35.04 4.35
2361 2504 1.080705 CGTCTCGGTGACCTTGGAC 60.081 63.158 0.00 4.38 42.49 4.02
2397 2540 3.550431 ACCGGGATGGCCTCGATG 61.550 66.667 6.32 0.00 43.94 3.84
2815 3060 2.058593 CCTCCAAAGGGCCTCATAAC 57.941 55.000 6.46 0.00 39.21 1.89
2825 3070 1.213926 CTCATCTTCCCCCTCCAAAGG 59.786 57.143 0.00 0.00 42.95 3.11
2837 3094 2.156504 CACGCACACAAGTCTCATCTTC 59.843 50.000 0.00 0.00 0.00 2.87
2838 3095 2.138320 CACGCACACAAGTCTCATCTT 58.862 47.619 0.00 0.00 0.00 2.40
2839 3096 1.069204 ACACGCACACAAGTCTCATCT 59.931 47.619 0.00 0.00 0.00 2.90
2840 3097 1.193203 CACACGCACACAAGTCTCATC 59.807 52.381 0.00 0.00 0.00 2.92
2841 3098 1.220529 CACACGCACACAAGTCTCAT 58.779 50.000 0.00 0.00 0.00 2.90
2842 3099 0.809636 CCACACGCACACAAGTCTCA 60.810 55.000 0.00 0.00 0.00 3.27
2843 3100 0.529773 TCCACACGCACACAAGTCTC 60.530 55.000 0.00 0.00 0.00 3.36
2844 3101 0.106708 ATCCACACGCACACAAGTCT 59.893 50.000 0.00 0.00 0.00 3.24
2906 3163 4.842380 ACAACACAATGTACCCCTACTACT 59.158 41.667 0.00 0.00 0.00 2.57
2946 3209 8.634335 TCAGACAATAATTCCATGACAAAAGA 57.366 30.769 0.00 0.00 0.00 2.52
2999 3265 6.555360 TGGAAAATAGGGGCAGAAACTTTTAA 59.445 34.615 0.00 0.00 0.00 1.52
3000 3266 6.078664 TGGAAAATAGGGGCAGAAACTTTTA 58.921 36.000 0.00 0.00 0.00 1.52
3001 3267 4.904853 TGGAAAATAGGGGCAGAAACTTTT 59.095 37.500 0.00 0.00 0.00 2.27
3002 3268 4.488770 TGGAAAATAGGGGCAGAAACTTT 58.511 39.130 0.00 0.00 0.00 2.66
3003 3269 4.089361 CTGGAAAATAGGGGCAGAAACTT 58.911 43.478 0.00 0.00 0.00 2.66
3004 3270 3.333680 TCTGGAAAATAGGGGCAGAAACT 59.666 43.478 0.00 0.00 0.00 2.66
3005 3271 3.696548 CTCTGGAAAATAGGGGCAGAAAC 59.303 47.826 0.00 0.00 0.00 2.78
3007 3273 3.189606 TCTCTGGAAAATAGGGGCAGAA 58.810 45.455 0.00 0.00 0.00 3.02
3008 3274 2.845659 TCTCTGGAAAATAGGGGCAGA 58.154 47.619 0.00 0.00 0.00 4.26
3009 3275 3.652057 TTCTCTGGAAAATAGGGGCAG 57.348 47.619 0.00 0.00 0.00 4.85
3010 3276 4.608170 ATTTCTCTGGAAAATAGGGGCA 57.392 40.909 0.00 0.00 43.51 5.36
3011 3277 6.641169 CTAATTTCTCTGGAAAATAGGGGC 57.359 41.667 5.96 0.00 43.51 5.80
3017 3283 7.922382 TCTCAGTCCTAATTTCTCTGGAAAAT 58.078 34.615 0.00 0.00 43.51 1.82
3038 3304 3.433173 CCATGGCATCTCACTGAATCTCA 60.433 47.826 0.00 0.00 0.00 3.27
3059 3325 0.103572 GCATGTCCATTCATGTGCCC 59.896 55.000 8.17 0.00 44.68 5.36
3060 3326 0.103572 GGCATGTCCATTCATGTGCC 59.896 55.000 4.20 4.20 44.68 5.01
3061 3327 0.103572 GGGCATGTCCATTCATGTGC 59.896 55.000 12.68 0.00 44.68 4.57
3062 3328 0.748450 GGGGCATGTCCATTCATGTG 59.252 55.000 20.13 0.00 44.68 3.21
3063 3329 0.397535 GGGGGCATGTCCATTCATGT 60.398 55.000 20.13 0.00 44.68 3.21
3064 3330 2.433217 GGGGGCATGTCCATTCATG 58.567 57.895 20.13 2.78 45.37 3.07
3086 3352 1.082117 CAATCGGACGGTCGAAAGGG 61.082 60.000 6.46 0.00 42.69 3.95
3088 3354 1.705256 TTCAATCGGACGGTCGAAAG 58.295 50.000 6.46 3.24 42.69 2.62
3096 3362 3.163594 GCTGTTGATTTTCAATCGGACG 58.836 45.455 0.00 0.00 38.79 4.79
3097 3363 3.501950 GGCTGTTGATTTTCAATCGGAC 58.498 45.455 0.00 0.00 38.79 4.79
3098 3364 2.491693 GGGCTGTTGATTTTCAATCGGA 59.508 45.455 0.00 0.00 38.79 4.55
3100 3366 3.191162 TCTGGGCTGTTGATTTTCAATCG 59.809 43.478 0.00 0.00 38.79 3.34
3101 3367 4.789012 TCTGGGCTGTTGATTTTCAATC 57.211 40.909 0.00 0.00 38.79 2.67
3102 3368 4.773674 TGATCTGGGCTGTTGATTTTCAAT 59.226 37.500 0.00 0.00 38.79 2.57
3103 3369 4.151121 TGATCTGGGCTGTTGATTTTCAA 58.849 39.130 0.00 0.00 33.32 2.69
3104 3370 3.760151 CTGATCTGGGCTGTTGATTTTCA 59.240 43.478 0.00 0.00 0.00 2.69
3105 3371 3.428589 GCTGATCTGGGCTGTTGATTTTC 60.429 47.826 1.46 0.00 0.00 2.29
3106 3372 2.494870 GCTGATCTGGGCTGTTGATTTT 59.505 45.455 1.46 0.00 0.00 1.82
3107 3373 2.097825 GCTGATCTGGGCTGTTGATTT 58.902 47.619 1.46 0.00 0.00 2.17
3108 3374 1.005097 TGCTGATCTGGGCTGTTGATT 59.995 47.619 1.46 0.00 0.00 2.57
3109 3375 0.622136 TGCTGATCTGGGCTGTTGAT 59.378 50.000 1.46 0.00 0.00 2.57
3110 3376 0.622136 ATGCTGATCTGGGCTGTTGA 59.378 50.000 1.46 0.00 0.00 3.18
3111 3377 0.738975 CATGCTGATCTGGGCTGTTG 59.261 55.000 1.46 0.00 0.00 3.33
3112 3378 0.622136 TCATGCTGATCTGGGCTGTT 59.378 50.000 1.46 0.00 0.00 3.16
3113 3379 0.622136 TTCATGCTGATCTGGGCTGT 59.378 50.000 1.46 0.00 0.00 4.40
3114 3380 1.022735 GTTCATGCTGATCTGGGCTG 58.977 55.000 1.46 1.86 0.00 4.85
3115 3381 0.622136 TGTTCATGCTGATCTGGGCT 59.378 50.000 1.46 0.00 0.00 5.19
3116 3382 1.022735 CTGTTCATGCTGATCTGGGC 58.977 55.000 1.46 0.80 0.00 5.36
3117 3383 2.414994 ACTGTTCATGCTGATCTGGG 57.585 50.000 1.46 0.00 0.00 4.45
3118 3384 3.201290 GGTACTGTTCATGCTGATCTGG 58.799 50.000 1.46 0.00 0.00 3.86
3119 3385 3.201290 GGGTACTGTTCATGCTGATCTG 58.799 50.000 0.00 0.00 0.00 2.90
3120 3386 2.159043 CGGGTACTGTTCATGCTGATCT 60.159 50.000 0.00 0.00 0.00 2.75
3121 3387 2.205074 CGGGTACTGTTCATGCTGATC 58.795 52.381 0.00 0.00 0.00 2.92
3122 3388 1.134401 CCGGGTACTGTTCATGCTGAT 60.134 52.381 0.00 0.00 0.00 2.90
3123 3389 0.249120 CCGGGTACTGTTCATGCTGA 59.751 55.000 0.00 0.00 0.00 4.26
3124 3390 0.249120 TCCGGGTACTGTTCATGCTG 59.751 55.000 0.00 0.00 0.00 4.41
3125 3391 0.249398 GTCCGGGTACTGTTCATGCT 59.751 55.000 0.00 0.00 0.00 3.79
3126 3392 0.036765 TGTCCGGGTACTGTTCATGC 60.037 55.000 0.00 0.00 0.00 4.06
3127 3393 1.001520 TGTGTCCGGGTACTGTTCATG 59.998 52.381 0.00 0.00 0.00 3.07
3128 3394 1.344065 TGTGTCCGGGTACTGTTCAT 58.656 50.000 0.00 0.00 0.00 2.57
3129 3395 1.121378 TTGTGTCCGGGTACTGTTCA 58.879 50.000 0.00 0.00 0.00 3.18
3130 3396 1.069668 AGTTGTGTCCGGGTACTGTTC 59.930 52.381 0.00 0.00 0.00 3.18
3131 3397 1.125633 AGTTGTGTCCGGGTACTGTT 58.874 50.000 0.00 0.00 0.00 3.16
3132 3398 1.615392 GTAGTTGTGTCCGGGTACTGT 59.385 52.381 0.00 0.00 0.00 3.55
3133 3399 1.614903 TGTAGTTGTGTCCGGGTACTG 59.385 52.381 0.00 0.00 0.00 2.74
3134 3400 1.891150 CTGTAGTTGTGTCCGGGTACT 59.109 52.381 0.00 0.80 0.00 2.73
3135 3401 1.615392 ACTGTAGTTGTGTCCGGGTAC 59.385 52.381 0.00 1.20 0.00 3.34
3136 3402 1.999648 ACTGTAGTTGTGTCCGGGTA 58.000 50.000 0.00 0.00 0.00 3.69
3137 3403 1.615392 GTACTGTAGTTGTGTCCGGGT 59.385 52.381 0.00 0.00 0.00 5.28
3138 3404 1.067354 GGTACTGTAGTTGTGTCCGGG 60.067 57.143 0.00 0.00 0.00 5.73
3139 3405 1.891150 AGGTACTGTAGTTGTGTCCGG 59.109 52.381 0.00 0.00 37.18 5.14
3140 3406 2.094854 GGAGGTACTGTAGTTGTGTCCG 60.095 54.545 0.00 0.00 41.55 4.79
3141 3407 3.163467 AGGAGGTACTGTAGTTGTGTCC 58.837 50.000 0.00 0.00 41.55 4.02
3142 3408 4.080687 AGAGGAGGTACTGTAGTTGTGTC 58.919 47.826 0.00 0.00 41.55 3.67
3143 3409 4.115398 AGAGGAGGTACTGTAGTTGTGT 57.885 45.455 0.00 0.00 41.55 3.72
3144 3410 4.322049 CCAAGAGGAGGTACTGTAGTTGTG 60.322 50.000 0.00 0.00 41.55 3.33
3145 3411 3.833070 CCAAGAGGAGGTACTGTAGTTGT 59.167 47.826 0.00 0.00 41.55 3.32
3146 3412 3.368531 GCCAAGAGGAGGTACTGTAGTTG 60.369 52.174 0.00 0.00 41.55 3.16
3147 3413 2.832733 GCCAAGAGGAGGTACTGTAGTT 59.167 50.000 0.00 0.00 41.55 2.24
3148 3414 2.458620 GCCAAGAGGAGGTACTGTAGT 58.541 52.381 0.00 0.00 41.55 2.73
3149 3415 1.757699 GGCCAAGAGGAGGTACTGTAG 59.242 57.143 0.00 0.00 41.55 2.74
3150 3416 1.861982 GGCCAAGAGGAGGTACTGTA 58.138 55.000 0.00 0.00 41.55 2.74
3151 3417 1.258445 CGGCCAAGAGGAGGTACTGT 61.258 60.000 2.24 0.00 41.55 3.55
3155 3421 0.627451 TAGACGGCCAAGAGGAGGTA 59.373 55.000 2.24 0.00 36.89 3.08
3156 3422 0.032017 ATAGACGGCCAAGAGGAGGT 60.032 55.000 2.24 0.00 36.89 3.85
3159 3425 3.713826 AAAAATAGACGGCCAAGAGGA 57.286 42.857 2.24 0.00 36.89 3.71
3186 3452 0.308376 AAAATGCGTAAACGTGCCGT 59.692 45.000 4.24 0.00 43.97 5.68
3187 3453 1.400550 AAAAATGCGTAAACGTGCCG 58.599 45.000 4.24 0.00 42.22 5.69
3188 3454 2.657848 GGTAAAAATGCGTAAACGTGCC 59.342 45.455 4.24 0.00 42.22 5.01
3190 3456 6.020520 ACAAAAGGTAAAAATGCGTAAACGTG 60.021 34.615 4.24 0.00 42.22 4.49
3191 3457 6.035217 ACAAAAGGTAAAAATGCGTAAACGT 58.965 32.000 4.24 0.00 42.22 3.99
3193 3459 9.544314 AAAAACAAAAGGTAAAAATGCGTAAAC 57.456 25.926 0.00 0.00 0.00 2.01
3220 3679 5.957842 AGGTGAAAATGCGTAAAGATTCA 57.042 34.783 0.00 0.00 0.00 2.57
3238 3697 7.305993 GCGTAAAGATTCTCAAAACAAAAGGTG 60.306 37.037 0.00 0.00 0.00 4.00
3251 3710 7.692705 GTCAGGTAAAAATGCGTAAAGATTCTC 59.307 37.037 0.00 0.00 0.00 2.87
3266 3725 7.038659 CCAAACAATGTTGAGTCAGGTAAAAA 58.961 34.615 0.00 0.00 0.00 1.94
3303 3762 1.774639 GGAGTGTTCGTTCGTTAGCA 58.225 50.000 0.00 0.00 0.00 3.49
3329 3788 1.374758 GACTCGAGTTGGGCCACTG 60.375 63.158 21.08 0.00 0.00 3.66
3330 3789 1.534235 AGACTCGAGTTGGGCCACT 60.534 57.895 21.08 7.08 0.00 4.00
3331 3790 1.374758 CAGACTCGAGTTGGGCCAC 60.375 63.158 21.08 4.69 0.00 5.01
3332 3791 1.533033 TCAGACTCGAGTTGGGCCA 60.533 57.895 21.08 0.00 0.00 5.36
3343 3814 3.462678 GGAGGGGGCGTCAGACTC 61.463 72.222 0.00 0.00 0.00 3.36
3369 3840 0.381089 CGGCGACTACGGAGAAGAAT 59.619 55.000 0.00 0.00 40.15 2.40
3476 3977 2.307098 CAAGGAGAACAACCTGGGATCT 59.693 50.000 0.00 0.00 37.85 2.75
3486 3987 5.891551 AGCTTTTTAAGGACAAGGAGAACAA 59.108 36.000 0.00 0.00 0.00 2.83
3489 3990 4.278419 GCAGCTTTTTAAGGACAAGGAGAA 59.722 41.667 0.00 0.00 0.00 2.87
3496 3997 3.149196 CTGGAGCAGCTTTTTAAGGACA 58.851 45.455 0.00 0.00 0.00 4.02
3497 3998 3.149981 ACTGGAGCAGCTTTTTAAGGAC 58.850 45.455 0.00 0.00 34.37 3.85
3499 4000 2.489722 GGACTGGAGCAGCTTTTTAAGG 59.510 50.000 0.00 0.00 34.37 2.69
3500 4001 3.416156 AGGACTGGAGCAGCTTTTTAAG 58.584 45.455 0.00 0.00 34.37 1.85
3501 4002 3.508845 AGGACTGGAGCAGCTTTTTAA 57.491 42.857 0.00 0.00 34.37 1.52
3502 4003 3.838317 TCTAGGACTGGAGCAGCTTTTTA 59.162 43.478 0.00 0.00 34.37 1.52
3503 4004 2.639839 TCTAGGACTGGAGCAGCTTTTT 59.360 45.455 0.00 0.00 34.37 1.94
3504 4005 2.260822 TCTAGGACTGGAGCAGCTTTT 58.739 47.619 0.00 0.00 34.37 2.27
3505 4006 1.944177 TCTAGGACTGGAGCAGCTTT 58.056 50.000 0.00 0.00 34.37 3.51
3506 4007 2.038659 GATCTAGGACTGGAGCAGCTT 58.961 52.381 0.00 0.00 34.37 3.74
3510 4011 1.570979 TGGAGATCTAGGACTGGAGCA 59.429 52.381 0.00 0.00 0.00 4.26
3536 4037 1.567504 ATTAGTGAAATCCCGACGCG 58.432 50.000 3.53 3.53 0.00 6.01
3580 4091 4.922206 TGAAGGCACCATCAAGTAGAAAT 58.078 39.130 0.00 0.00 0.00 2.17
3603 4116 7.622893 AACTCAGCCTGAAAATCTAGAATTC 57.377 36.000 12.44 12.44 0.00 2.17
3620 4133 4.004196 AGTTACAGTGGGTAAACTCAGC 57.996 45.455 0.00 0.00 43.30 4.26
3621 4134 4.755123 CCAAGTTACAGTGGGTAAACTCAG 59.245 45.833 0.00 0.00 43.30 3.35
3622 4135 4.164604 ACCAAGTTACAGTGGGTAAACTCA 59.835 41.667 9.41 0.00 43.30 3.41
3623 4136 4.711399 ACCAAGTTACAGTGGGTAAACTC 58.289 43.478 9.41 0.00 43.30 3.01
3624 4137 4.783560 ACCAAGTTACAGTGGGTAAACT 57.216 40.909 9.41 0.00 43.30 2.66
3625 4138 6.511605 CGTTAACCAAGTTACAGTGGGTAAAC 60.512 42.308 14.45 10.92 46.16 2.01
3626 4139 5.526846 CGTTAACCAAGTTACAGTGGGTAAA 59.473 40.000 14.45 2.56 46.16 2.01
3627 4140 5.055812 CGTTAACCAAGTTACAGTGGGTAA 58.944 41.667 10.34 10.34 43.31 2.85
3628 4141 4.343526 TCGTTAACCAAGTTACAGTGGGTA 59.656 41.667 9.41 4.73 39.39 3.69
3629 4142 3.134442 TCGTTAACCAAGTTACAGTGGGT 59.866 43.478 9.41 5.63 39.39 4.51
3630 4143 3.731089 TCGTTAACCAAGTTACAGTGGG 58.269 45.455 9.41 0.00 39.39 4.61
3631 4144 4.571580 TGTTCGTTAACCAAGTTACAGTGG 59.428 41.667 0.00 3.91 41.00 4.00
3632 4145 5.721876 TGTTCGTTAACCAAGTTACAGTG 57.278 39.130 0.00 0.00 34.49 3.66
3633 4146 5.818857 ACATGTTCGTTAACCAAGTTACAGT 59.181 36.000 0.00 0.00 34.49 3.55
3634 4147 6.295039 ACATGTTCGTTAACCAAGTTACAG 57.705 37.500 0.00 0.00 34.49 2.74
3635 4148 5.236911 GGACATGTTCGTTAACCAAGTTACA 59.763 40.000 0.00 0.00 34.49 2.41
3636 4149 5.467735 AGGACATGTTCGTTAACCAAGTTAC 59.532 40.000 0.00 0.00 34.49 2.50
3637 4150 5.613329 AGGACATGTTCGTTAACCAAGTTA 58.387 37.500 0.00 0.00 34.49 2.24
3638 4151 4.457466 AGGACATGTTCGTTAACCAAGTT 58.543 39.130 0.00 0.00 34.49 2.66
3639 4152 4.062991 GAGGACATGTTCGTTAACCAAGT 58.937 43.478 0.00 0.00 34.49 3.16
3640 4153 3.122948 CGAGGACATGTTCGTTAACCAAG 59.877 47.826 11.03 0.00 34.49 3.61
3641 4154 3.061322 CGAGGACATGTTCGTTAACCAA 58.939 45.455 11.03 0.00 34.49 3.67
3642 4155 2.610976 CCGAGGACATGTTCGTTAACCA 60.611 50.000 16.47 0.00 34.49 3.67
3643 4156 1.997606 CCGAGGACATGTTCGTTAACC 59.002 52.381 16.47 4.53 34.49 2.85
3644 4157 2.680577 ACCGAGGACATGTTCGTTAAC 58.319 47.619 16.47 0.00 35.14 2.01
3645 4158 3.389925 AACCGAGGACATGTTCGTTAA 57.610 42.857 16.47 0.00 35.14 2.01
3646 4159 3.389925 AAACCGAGGACATGTTCGTTA 57.610 42.857 16.47 0.00 35.14 3.18
3647 4160 2.249844 AAACCGAGGACATGTTCGTT 57.750 45.000 16.47 4.90 35.14 3.85
3648 4161 2.249844 AAAACCGAGGACATGTTCGT 57.750 45.000 16.47 5.02 35.14 3.85
3649 4162 2.806244 AGAAAAACCGAGGACATGTTCG 59.194 45.455 12.06 12.06 36.62 3.95
3650 4163 4.036380 ACAAGAAAAACCGAGGACATGTTC 59.964 41.667 0.00 0.00 0.00 3.18
3651 4164 3.951680 ACAAGAAAAACCGAGGACATGTT 59.048 39.130 0.00 0.00 0.00 2.71
3652 4165 3.551846 ACAAGAAAAACCGAGGACATGT 58.448 40.909 0.00 0.00 0.00 3.21
3653 4166 4.568152 AACAAGAAAAACCGAGGACATG 57.432 40.909 0.00 0.00 0.00 3.21
3654 4167 4.642885 TCAAACAAGAAAAACCGAGGACAT 59.357 37.500 0.00 0.00 0.00 3.06
3655 4168 4.011023 TCAAACAAGAAAAACCGAGGACA 58.989 39.130 0.00 0.00 0.00 4.02
3656 4169 4.625972 TCAAACAAGAAAAACCGAGGAC 57.374 40.909 0.00 0.00 0.00 3.85
3657 4170 5.845391 AATCAAACAAGAAAAACCGAGGA 57.155 34.783 0.00 0.00 0.00 3.71
3658 4171 6.273071 AGAAATCAAACAAGAAAAACCGAGG 58.727 36.000 0.00 0.00 0.00 4.63
3659 4172 7.043391 GGAAGAAATCAAACAAGAAAAACCGAG 60.043 37.037 0.00 0.00 0.00 4.63
3660 4173 6.754675 GGAAGAAATCAAACAAGAAAAACCGA 59.245 34.615 0.00 0.00 0.00 4.69
3661 4174 6.291585 CGGAAGAAATCAAACAAGAAAAACCG 60.292 38.462 0.00 0.00 0.00 4.44
3662 4175 6.754675 TCGGAAGAAATCAAACAAGAAAAACC 59.245 34.615 0.00 0.00 37.03 3.27
3663 4176 7.749539 TCGGAAGAAATCAAACAAGAAAAAC 57.250 32.000 0.00 0.00 37.03 2.43
3721 4234 9.807649 GCTCAAATCATCAAACCATTATTAACT 57.192 29.630 0.00 0.00 0.00 2.24
3722 4235 9.807649 AGCTCAAATCATCAAACCATTATTAAC 57.192 29.630 0.00 0.00 0.00 2.01
3725 4238 9.729281 AAAAGCTCAAATCATCAAACCATTATT 57.271 25.926 0.00 0.00 0.00 1.40
3726 4239 9.374838 GAAAAGCTCAAATCATCAAACCATTAT 57.625 29.630 0.00 0.00 0.00 1.28
3727 4240 8.587608 AGAAAAGCTCAAATCATCAAACCATTA 58.412 29.630 0.00 0.00 0.00 1.90
3728 4241 7.447594 AGAAAAGCTCAAATCATCAAACCATT 58.552 30.769 0.00 0.00 0.00 3.16
3729 4242 7.001099 AGAAAAGCTCAAATCATCAAACCAT 57.999 32.000 0.00 0.00 0.00 3.55
3730 4243 6.409524 AGAAAAGCTCAAATCATCAAACCA 57.590 33.333 0.00 0.00 0.00 3.67
3731 4244 6.703165 ACAAGAAAAGCTCAAATCATCAAACC 59.297 34.615 0.00 0.00 0.00 3.27
3732 4245 7.357859 CGACAAGAAAAGCTCAAATCATCAAAC 60.358 37.037 0.00 0.00 0.00 2.93
3733 4246 6.638063 CGACAAGAAAAGCTCAAATCATCAAA 59.362 34.615 0.00 0.00 0.00 2.69
3734 4247 6.017192 TCGACAAGAAAAGCTCAAATCATCAA 60.017 34.615 0.00 0.00 0.00 2.57
3735 4248 5.469760 TCGACAAGAAAAGCTCAAATCATCA 59.530 36.000 0.00 0.00 0.00 3.07
3736 4249 5.792468 GTCGACAAGAAAAGCTCAAATCATC 59.208 40.000 11.55 0.00 0.00 2.92
3737 4250 5.471456 AGTCGACAAGAAAAGCTCAAATCAT 59.529 36.000 19.50 0.00 0.00 2.45
3738 4251 4.816385 AGTCGACAAGAAAAGCTCAAATCA 59.184 37.500 19.50 0.00 0.00 2.57
3739 4252 5.050091 TGAGTCGACAAGAAAAGCTCAAATC 60.050 40.000 19.50 0.79 0.00 2.17
3740 4253 4.816385 TGAGTCGACAAGAAAAGCTCAAAT 59.184 37.500 19.50 0.00 0.00 2.32
3741 4254 4.188462 TGAGTCGACAAGAAAAGCTCAAA 58.812 39.130 19.50 0.00 0.00 2.69
3742 4255 3.792401 TGAGTCGACAAGAAAAGCTCAA 58.208 40.909 19.50 0.00 0.00 3.02
3743 4256 3.452755 TGAGTCGACAAGAAAAGCTCA 57.547 42.857 19.50 6.29 0.00 4.26
3744 4257 3.990469 TCATGAGTCGACAAGAAAAGCTC 59.010 43.478 19.50 3.46 0.00 4.09
3745 4258 3.995199 TCATGAGTCGACAAGAAAAGCT 58.005 40.909 19.50 0.00 0.00 3.74
3746 4259 4.935885 ATCATGAGTCGACAAGAAAAGC 57.064 40.909 19.50 0.00 0.00 3.51
3747 4260 6.146837 ACTGAATCATGAGTCGACAAGAAAAG 59.853 38.462 19.50 8.82 0.00 2.27
3748 4261 5.991606 ACTGAATCATGAGTCGACAAGAAAA 59.008 36.000 19.50 0.00 0.00 2.29
3749 4262 5.406477 CACTGAATCATGAGTCGACAAGAAA 59.594 40.000 19.50 0.01 0.00 2.52
3750 4263 4.925646 CACTGAATCATGAGTCGACAAGAA 59.074 41.667 19.50 0.00 0.00 2.52
3751 4264 4.218417 TCACTGAATCATGAGTCGACAAGA 59.782 41.667 19.50 9.84 0.00 3.02
3752 4265 4.488879 TCACTGAATCATGAGTCGACAAG 58.511 43.478 19.50 11.75 0.00 3.16
3753 4266 4.488879 CTCACTGAATCATGAGTCGACAA 58.511 43.478 19.50 5.81 38.03 3.18
3754 4267 4.102035 CTCACTGAATCATGAGTCGACA 57.898 45.455 19.50 0.00 38.03 4.35
3760 4273 3.185330 CGTGGACTCACTGAATCATGAG 58.815 50.000 15.89 15.89 46.49 2.90
3761 4274 2.094026 CCGTGGACTCACTGAATCATGA 60.094 50.000 0.00 0.00 41.53 3.07
3762 4275 2.094026 TCCGTGGACTCACTGAATCATG 60.094 50.000 0.00 0.00 41.53 3.07
3763 4276 2.179427 TCCGTGGACTCACTGAATCAT 58.821 47.619 0.00 0.00 41.53 2.45
3764 4277 1.627864 TCCGTGGACTCACTGAATCA 58.372 50.000 0.00 0.00 41.53 2.57
3765 4278 2.932614 CAATCCGTGGACTCACTGAATC 59.067 50.000 0.00 0.00 39.80 2.52
3766 4279 2.977914 CAATCCGTGGACTCACTGAAT 58.022 47.619 0.00 0.00 39.80 2.57
3767 4280 2.455674 CAATCCGTGGACTCACTGAA 57.544 50.000 0.00 0.00 39.80 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.