Multiple sequence alignment - TraesCS7B01G367200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G367200 chr7B 100.000 2570 0 0 1 2570 630808763 630806194 0.000000e+00 4747.0
1 TraesCS7B01G367200 chr7B 94.270 1501 43 24 693 2164 73724123 73725609 0.000000e+00 2255.0
2 TraesCS7B01G367200 chr7B 94.269 1361 32 26 192 1522 73722783 73724127 0.000000e+00 2039.0
3 TraesCS7B01G367200 chr7B 98.563 696 7 2 193 885 630807295 630806600 0.000000e+00 1227.0
4 TraesCS7B01G367200 chr7B 98.563 696 7 2 1469 2164 630808571 630807879 0.000000e+00 1227.0
5 TraesCS7B01G367200 chrUn 93.353 2016 72 40 191 2164 287166185 287168180 0.000000e+00 2924.0
6 TraesCS7B01G367200 chrUn 91.356 2013 110 44 192 2164 222397651 222399639 0.000000e+00 2695.0
7 TraesCS7B01G367200 chrUn 91.319 2016 105 47 192 2164 50491054 50493042 0.000000e+00 2689.0
8 TraesCS7B01G367200 chrUn 91.274 722 33 21 1461 2164 287166179 287166888 0.000000e+00 957.0
9 TraesCS7B01G367200 chrUn 100.000 31 0 0 2350 2380 53262655 53262625 9.930000e-05 58.4
10 TraesCS7B01G367200 chrUn 100.000 31 0 0 2350 2380 231489023 231489053 9.930000e-05 58.4
11 TraesCS7B01G367200 chrUn 100.000 31 0 0 2350 2380 244844079 244844049 9.930000e-05 58.4
12 TraesCS7B01G367200 chrUn 100.000 31 0 0 2350 2380 331843167 331843137 9.930000e-05 58.4
13 TraesCS7B01G367200 chrUn 100.000 31 0 0 2350 2380 354744043 354744013 9.930000e-05 58.4
14 TraesCS7B01G367200 chrUn 100.000 31 0 0 2350 2380 363863757 363863727 9.930000e-05 58.4
15 TraesCS7B01G367200 chr4B 93.366 2020 58 47 191 2164 645815018 645817007 0.000000e+00 2918.0
16 TraesCS7B01G367200 chr7A 93.257 2017 72 42 192 2164 165069272 165067276 0.000000e+00 2913.0
17 TraesCS7B01G367200 chr7A 89.000 100 3 5 191 290 31999821 31999912 1.620000e-22 117.0
18 TraesCS7B01G367200 chr5A 97.937 1503 21 3 457 1952 701908464 701906965 0.000000e+00 2595.0
19 TraesCS7B01G367200 chr5A 99.139 697 5 1 190 885 701906483 701905787 0.000000e+00 1253.0
20 TraesCS7B01G367200 chr5A 98.440 705 7 3 1466 2170 701906482 701905782 0.000000e+00 1238.0
21 TraesCS7B01G367200 chr1B 97.571 988 15 2 548 1528 7356452 7357437 0.000000e+00 1683.0
22 TraesCS7B01G367200 chr5B 96.562 698 13 8 1469 2164 14912782 14912094 0.000000e+00 1146.0
23 TraesCS7B01G367200 chr5B 91.725 713 31 20 1469 2164 30658744 30659445 0.000000e+00 965.0
24 TraesCS7B01G367200 chr5B 100.000 33 0 0 2350 2382 261264354 261264386 7.680000e-06 62.1
25 TraesCS7B01G367200 chr3A 90.430 721 34 18 1469 2164 745457847 745457137 0.000000e+00 917.0
26 TraesCS7B01G367200 chr2D 89.130 92 10 0 89 180 453722969 453722878 5.810000e-22 115.0
27 TraesCS7B01G367200 chr6B 85.577 104 8 5 191 290 208173837 208173737 4.520000e-18 102.0
28 TraesCS7B01G367200 chr5D 100.000 33 0 0 2348 2380 128182320 128182288 7.680000e-06 62.1
29 TraesCS7B01G367200 chr2A 97.222 36 0 1 2350 2384 706547933 706547898 2.760000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G367200 chr7B 630806194 630808763 2569 True 2400.333333 4747 99.042000 1 2570 3 chr7B.!!$R1 2569
1 TraesCS7B01G367200 chr7B 73722783 73725609 2826 False 2147.000000 2255 94.269500 192 2164 2 chr7B.!!$F1 1972
2 TraesCS7B01G367200 chrUn 222397651 222399639 1988 False 2695.000000 2695 91.356000 192 2164 1 chrUn.!!$F2 1972
3 TraesCS7B01G367200 chrUn 50491054 50493042 1988 False 2689.000000 2689 91.319000 192 2164 1 chrUn.!!$F1 1972
4 TraesCS7B01G367200 chrUn 287166179 287168180 2001 False 1940.500000 2924 92.313500 191 2164 2 chrUn.!!$F4 1973
5 TraesCS7B01G367200 chr4B 645815018 645817007 1989 False 2918.000000 2918 93.366000 191 2164 1 chr4B.!!$F1 1973
6 TraesCS7B01G367200 chr7A 165067276 165069272 1996 True 2913.000000 2913 93.257000 192 2164 1 chr7A.!!$R1 1972
7 TraesCS7B01G367200 chr5A 701905782 701908464 2682 True 1695.333333 2595 98.505333 190 2170 3 chr5A.!!$R1 1980
8 TraesCS7B01G367200 chr1B 7356452 7357437 985 False 1683.000000 1683 97.571000 548 1528 1 chr1B.!!$F1 980
9 TraesCS7B01G367200 chr5B 14912094 14912782 688 True 1146.000000 1146 96.562000 1469 2164 1 chr5B.!!$R1 695
10 TraesCS7B01G367200 chr5B 30658744 30659445 701 False 965.000000 965 91.725000 1469 2164 1 chr5B.!!$F1 695
11 TraesCS7B01G367200 chr3A 745457137 745457847 710 True 917.000000 917 90.430000 1469 2164 1 chr3A.!!$R1 695

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
88 89 0.105039 GACGTGGGGATAGGCTGAAG 59.895 60.0 0.0 0.0 0.0 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1807 4998 1.069513 TGGTCACAAGTGGTTACCGAG 59.93 52.381 0.0 0.0 45.12 4.63 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.170723 GCTGTTCGTCGGAGGAAG 57.829 61.111 12.96 4.47 0.00 3.46
18 19 1.446272 GCTGTTCGTCGGAGGAAGG 60.446 63.158 12.96 10.17 0.00 3.46
19 20 1.874345 GCTGTTCGTCGGAGGAAGGA 61.874 60.000 12.96 3.26 0.00 3.36
20 21 0.109226 CTGTTCGTCGGAGGAAGGAC 60.109 60.000 12.96 4.06 31.51 3.85
52 53 2.319219 GGCGACGACTAGAGGTAGG 58.681 63.158 0.00 0.00 0.00 3.18
53 54 0.463474 GGCGACGACTAGAGGTAGGT 60.463 60.000 0.00 0.00 0.00 3.08
54 55 0.656785 GCGACGACTAGAGGTAGGTG 59.343 60.000 0.00 0.00 0.00 4.00
55 56 1.297664 CGACGACTAGAGGTAGGTGG 58.702 60.000 0.00 0.00 0.00 4.61
56 57 1.134580 CGACGACTAGAGGTAGGTGGA 60.135 57.143 0.00 0.00 0.00 4.02
57 58 2.563702 GACGACTAGAGGTAGGTGGAG 58.436 57.143 0.00 0.00 0.00 3.86
58 59 1.212441 ACGACTAGAGGTAGGTGGAGG 59.788 57.143 0.00 0.00 0.00 4.30
59 60 1.489649 CGACTAGAGGTAGGTGGAGGA 59.510 57.143 0.00 0.00 0.00 3.71
60 61 2.092538 CGACTAGAGGTAGGTGGAGGAA 60.093 54.545 0.00 0.00 0.00 3.36
61 62 3.558033 GACTAGAGGTAGGTGGAGGAAG 58.442 54.545 0.00 0.00 0.00 3.46
62 63 2.312390 CTAGAGGTAGGTGGAGGAAGC 58.688 57.143 0.00 0.00 0.00 3.86
63 64 0.413832 AGAGGTAGGTGGAGGAAGCA 59.586 55.000 0.00 0.00 0.00 3.91
64 65 0.827368 GAGGTAGGTGGAGGAAGCAG 59.173 60.000 0.00 0.00 0.00 4.24
65 66 1.222113 GGTAGGTGGAGGAAGCAGC 59.778 63.158 0.00 0.00 0.00 5.25
66 67 1.153549 GTAGGTGGAGGAAGCAGCG 60.154 63.158 0.00 0.00 0.00 5.18
67 68 2.359169 TAGGTGGAGGAAGCAGCGG 61.359 63.158 0.00 0.00 0.00 5.52
83 84 4.603946 GGCGACGTGGGGATAGGC 62.604 72.222 0.00 0.00 0.00 3.93
84 85 3.537874 GCGACGTGGGGATAGGCT 61.538 66.667 0.00 0.00 0.00 4.58
85 86 2.417516 CGACGTGGGGATAGGCTG 59.582 66.667 0.00 0.00 0.00 4.85
86 87 2.125326 CGACGTGGGGATAGGCTGA 61.125 63.158 0.00 0.00 0.00 4.26
87 88 1.672854 CGACGTGGGGATAGGCTGAA 61.673 60.000 0.00 0.00 0.00 3.02
88 89 0.105039 GACGTGGGGATAGGCTGAAG 59.895 60.000 0.00 0.00 0.00 3.02
89 90 0.325296 ACGTGGGGATAGGCTGAAGA 60.325 55.000 0.00 0.00 0.00 2.87
90 91 1.051812 CGTGGGGATAGGCTGAAGAT 58.948 55.000 0.00 0.00 0.00 2.40
91 92 1.270518 CGTGGGGATAGGCTGAAGATG 60.271 57.143 0.00 0.00 0.00 2.90
92 93 0.767375 TGGGGATAGGCTGAAGATGC 59.233 55.000 0.00 0.00 0.00 3.91
99 100 2.555123 GGCTGAAGATGCCGTTTCA 58.445 52.632 0.00 0.00 41.03 2.69
100 101 0.169009 GGCTGAAGATGCCGTTTCAC 59.831 55.000 0.00 0.00 41.03 3.18
101 102 1.160137 GCTGAAGATGCCGTTTCACT 58.840 50.000 0.00 0.00 30.66 3.41
102 103 1.537202 GCTGAAGATGCCGTTTCACTT 59.463 47.619 0.00 0.00 30.66 3.16
103 104 2.413371 GCTGAAGATGCCGTTTCACTTC 60.413 50.000 0.00 0.00 37.87 3.01
104 105 2.807967 CTGAAGATGCCGTTTCACTTCA 59.192 45.455 0.00 0.00 42.59 3.02
105 106 3.411446 TGAAGATGCCGTTTCACTTCAT 58.589 40.909 0.00 0.00 40.86 2.57
106 107 3.189080 TGAAGATGCCGTTTCACTTCATG 59.811 43.478 0.00 0.00 40.86 3.07
107 108 1.470098 AGATGCCGTTTCACTTCATGC 59.530 47.619 0.00 0.00 0.00 4.06
108 109 0.168788 ATGCCGTTTCACTTCATGCG 59.831 50.000 0.00 0.00 0.00 4.73
109 110 1.797537 GCCGTTTCACTTCATGCGC 60.798 57.895 0.00 0.00 0.00 6.09
110 111 1.868997 CCGTTTCACTTCATGCGCT 59.131 52.632 9.73 0.00 0.00 5.92
111 112 0.453282 CCGTTTCACTTCATGCGCTG 60.453 55.000 9.73 4.58 0.00 5.18
112 113 0.512518 CGTTTCACTTCATGCGCTGA 59.487 50.000 9.73 7.24 0.00 4.26
113 114 1.069973 CGTTTCACTTCATGCGCTGAA 60.070 47.619 9.73 14.76 41.61 3.02
114 115 2.310577 GTTTCACTTCATGCGCTGAAC 58.689 47.619 9.73 0.53 38.97 3.18
115 116 0.874390 TTCACTTCATGCGCTGAACC 59.126 50.000 9.73 0.00 38.97 3.62
116 117 0.250252 TCACTTCATGCGCTGAACCA 60.250 50.000 9.73 0.00 38.97 3.67
117 118 0.806868 CACTTCATGCGCTGAACCAT 59.193 50.000 9.73 0.43 38.97 3.55
118 119 1.200716 CACTTCATGCGCTGAACCATT 59.799 47.619 9.73 0.00 38.97 3.16
119 120 1.888512 ACTTCATGCGCTGAACCATTT 59.111 42.857 9.73 0.00 38.97 2.32
120 121 3.081061 ACTTCATGCGCTGAACCATTTA 58.919 40.909 9.73 0.00 38.97 1.40
121 122 3.696051 ACTTCATGCGCTGAACCATTTAT 59.304 39.130 9.73 0.00 38.97 1.40
122 123 3.696281 TCATGCGCTGAACCATTTATG 57.304 42.857 9.73 0.00 0.00 1.90
123 124 2.121786 CATGCGCTGAACCATTTATGC 58.878 47.619 9.73 0.00 0.00 3.14
124 125 0.455410 TGCGCTGAACCATTTATGCC 59.545 50.000 9.73 0.00 0.00 4.40
125 126 0.592247 GCGCTGAACCATTTATGCCG 60.592 55.000 0.00 0.00 0.00 5.69
126 127 0.592247 CGCTGAACCATTTATGCCGC 60.592 55.000 0.00 0.00 0.00 6.53
127 128 0.592247 GCTGAACCATTTATGCCGCG 60.592 55.000 0.00 0.00 0.00 6.46
128 129 0.732571 CTGAACCATTTATGCCGCGT 59.267 50.000 4.92 0.00 0.00 6.01
129 130 0.449786 TGAACCATTTATGCCGCGTG 59.550 50.000 4.92 0.00 0.00 5.34
130 131 0.865639 GAACCATTTATGCCGCGTGC 60.866 55.000 4.92 9.16 41.77 5.34
131 132 2.352229 CCATTTATGCCGCGTGCG 60.352 61.111 4.92 7.38 45.60 5.34
132 133 2.403186 CATTTATGCCGCGTGCGT 59.597 55.556 13.70 16.53 45.60 5.24
133 134 1.933997 CATTTATGCCGCGTGCGTG 60.934 57.895 20.08 3.39 45.60 5.34
134 135 2.395360 ATTTATGCCGCGTGCGTGT 61.395 52.632 20.08 9.72 45.60 4.49
135 136 1.917782 ATTTATGCCGCGTGCGTGTT 61.918 50.000 20.08 6.87 45.60 3.32
136 137 2.119147 TTTATGCCGCGTGCGTGTTT 62.119 50.000 20.08 0.00 45.60 2.83
137 138 2.119147 TTATGCCGCGTGCGTGTTTT 62.119 50.000 20.08 0.00 45.60 2.43
138 139 2.119147 TATGCCGCGTGCGTGTTTTT 62.119 50.000 20.08 0.00 45.60 1.94
165 166 3.255379 GCTAGAGCGCCCGAAACG 61.255 66.667 2.29 0.00 0.00 3.60
176 177 2.648724 CGAAACGGATGCATGCGC 60.649 61.111 36.07 21.06 45.92 6.09
177 178 2.648724 GAAACGGATGCATGCGCG 60.649 61.111 36.07 15.38 45.92 6.86
178 179 4.834892 AAACGGATGCATGCGCGC 62.835 61.111 36.07 27.26 45.92 6.86
185 186 3.109240 TGCATGCGCGCATATGTT 58.891 50.000 42.66 22.69 42.97 2.71
186 187 1.298488 TGCATGCGCGCATATGTTG 60.298 52.632 42.66 32.54 42.97 3.33
187 188 2.012414 GCATGCGCGCATATGTTGG 61.012 57.895 42.66 30.03 34.91 3.77
188 189 1.648174 CATGCGCGCATATGTTGGA 59.352 52.632 42.66 15.82 34.91 3.53
189 190 0.385098 CATGCGCGCATATGTTGGAG 60.385 55.000 42.66 25.36 34.91 3.86
258 261 0.735632 CTGCCTCGCACAACTCTCTC 60.736 60.000 0.00 0.00 33.79 3.20
259 262 1.181741 TGCCTCGCACAACTCTCTCT 61.182 55.000 0.00 0.00 31.71 3.10
263 289 2.415357 CCTCGCACAACTCTCTCTTCTC 60.415 54.545 0.00 0.00 0.00 2.87
267 293 3.057596 CGCACAACTCTCTCTTCTCTCTT 60.058 47.826 0.00 0.00 0.00 2.85
268 294 4.485163 GCACAACTCTCTCTTCTCTCTTC 58.515 47.826 0.00 0.00 0.00 2.87
269 295 4.218417 GCACAACTCTCTCTTCTCTCTTCT 59.782 45.833 0.00 0.00 0.00 2.85
271 297 6.095440 GCACAACTCTCTCTTCTCTCTTCTAT 59.905 42.308 0.00 0.00 0.00 1.98
273 299 6.603201 ACAACTCTCTCTTCTCTCTTCTATGG 59.397 42.308 0.00 0.00 0.00 2.74
290 318 5.794894 TCTATGGTTTCTCTCAAGAACACC 58.205 41.667 10.19 10.19 41.23 4.16
291 319 4.713792 ATGGTTTCTCTCAAGAACACCT 57.286 40.909 14.68 0.00 41.23 4.00
296 324 3.371102 TCTCTCAAGAACACCTGAACG 57.629 47.619 0.00 0.00 0.00 3.95
315 358 0.300491 GCACACTACACACACACACG 59.700 55.000 0.00 0.00 0.00 4.49
316 359 0.300491 CACACTACACACACACACGC 59.700 55.000 0.00 0.00 0.00 5.34
326 369 1.355210 CACACACGCACCAAGGAAC 59.645 57.895 0.00 0.00 0.00 3.62
330 373 0.814010 ACACGCACCAAGGAACAGAC 60.814 55.000 0.00 0.00 0.00 3.51
332 375 1.227823 CGCACCAAGGAACAGACCA 60.228 57.895 0.00 0.00 0.00 4.02
333 376 0.606401 CGCACCAAGGAACAGACCAT 60.606 55.000 0.00 0.00 0.00 3.55
334 377 1.168714 GCACCAAGGAACAGACCATC 58.831 55.000 0.00 0.00 0.00 3.51
336 379 0.324943 ACCAAGGAACAGACCATCCG 59.675 55.000 0.00 0.00 40.78 4.18
337 380 1.026718 CCAAGGAACAGACCATCCGC 61.027 60.000 0.00 0.00 40.78 5.54
348 391 2.537560 CCATCCGCTAGCTTTGCCG 61.538 63.158 13.93 0.00 0.00 5.69
349 392 1.521457 CATCCGCTAGCTTTGCCGA 60.521 57.895 13.93 0.00 0.00 5.54
350 393 1.227380 ATCCGCTAGCTTTGCCGAG 60.227 57.895 13.93 0.00 0.00 4.63
351 394 1.676678 ATCCGCTAGCTTTGCCGAGA 61.677 55.000 13.93 0.00 0.00 4.04
366 409 1.985116 GAGAGGCTCCGTCCTTGGT 60.985 63.158 11.71 0.00 36.38 3.67
370 413 1.201429 AGGCTCCGTCCTTGGTGAAT 61.201 55.000 0.00 0.00 30.82 2.57
374 417 2.893637 CTCCGTCCTTGGTGAATACAG 58.106 52.381 0.00 0.00 0.00 2.74
388 431 5.163754 GGTGAATACAGTGGCTACATGTTTC 60.164 44.000 2.30 10.30 0.00 2.78
390 433 5.643348 TGAATACAGTGGCTACATGTTTCTG 59.357 40.000 2.30 8.51 0.00 3.02
893 938 6.567602 AGATTAGCTCTAACATTCACCCTT 57.432 37.500 0.00 0.00 30.26 3.95
1106 1158 3.511595 CGCCATCGTGCTGCCAAT 61.512 61.111 0.00 0.00 0.00 3.16
1458 1510 1.734137 GCGGATCGACAAGGCTCTA 59.266 57.895 0.00 0.00 0.00 2.43
1577 4262 1.603802 CAAGAACACCTGAACGCACAT 59.396 47.619 0.00 0.00 0.00 3.21
1670 4378 2.224621 ACAGTGGCTACATGTTTCTGCT 60.225 45.455 2.30 0.00 0.00 4.24
1781 4972 0.323178 TCCCACGTACTCCACTCCTC 60.323 60.000 0.00 0.00 0.00 3.71
1998 5191 0.530744 TACGTCTTGCCGCTTCTCAT 59.469 50.000 0.00 0.00 0.00 2.90
2018 5211 1.153309 CAGCACCATCGGCATCTCA 60.153 57.895 0.00 0.00 0.00 3.27
2019 5212 1.145598 AGCACCATCGGCATCTCAG 59.854 57.895 0.00 0.00 0.00 3.35
2165 5358 9.553064 ACAAATATCAAGATTAGCTCTAACAGG 57.447 33.333 0.00 0.00 32.41 4.00
2166 5359 9.770097 CAAATATCAAGATTAGCTCTAACAGGA 57.230 33.333 0.00 0.00 32.41 3.86
2167 5360 9.995003 AAATATCAAGATTAGCTCTAACAGGAG 57.005 33.333 0.00 0.00 32.41 3.69
2168 5361 8.948401 ATATCAAGATTAGCTCTAACAGGAGA 57.052 34.615 0.00 0.00 35.52 3.71
2169 5362 7.854166 ATCAAGATTAGCTCTAACAGGAGAT 57.146 36.000 0.00 0.00 35.52 2.75
2170 5363 7.048629 TCAAGATTAGCTCTAACAGGAGATG 57.951 40.000 0.00 0.00 35.52 2.90
2171 5364 5.467035 AGATTAGCTCTAACAGGAGATGC 57.533 43.478 0.00 0.00 35.52 3.91
2172 5365 4.283212 AGATTAGCTCTAACAGGAGATGCC 59.717 45.833 0.00 0.00 35.52 4.40
2173 5366 1.127343 AGCTCTAACAGGAGATGCCC 58.873 55.000 0.00 0.00 37.37 5.36
2174 5367 1.127343 GCTCTAACAGGAGATGCCCT 58.873 55.000 0.00 0.00 37.37 5.19
2175 5368 2.091055 AGCTCTAACAGGAGATGCCCTA 60.091 50.000 0.00 0.00 37.37 3.53
2176 5369 2.700897 GCTCTAACAGGAGATGCCCTAA 59.299 50.000 0.00 0.00 37.37 2.69
2177 5370 3.326297 GCTCTAACAGGAGATGCCCTAAT 59.674 47.826 0.00 0.00 37.37 1.73
2178 5371 4.802248 GCTCTAACAGGAGATGCCCTAATG 60.802 50.000 0.00 0.00 37.37 1.90
2179 5372 4.298626 TCTAACAGGAGATGCCCTAATGT 58.701 43.478 0.00 0.00 37.37 2.71
2180 5373 4.721776 TCTAACAGGAGATGCCCTAATGTT 59.278 41.667 0.00 0.00 37.40 2.71
2181 5374 3.567478 ACAGGAGATGCCCTAATGTTC 57.433 47.619 0.00 0.00 37.37 3.18
2182 5375 2.158900 ACAGGAGATGCCCTAATGTTCG 60.159 50.000 0.00 0.00 37.37 3.95
2183 5376 2.119495 AGGAGATGCCCTAATGTTCGT 58.881 47.619 0.00 0.00 37.37 3.85
2184 5377 2.505819 AGGAGATGCCCTAATGTTCGTT 59.494 45.455 0.00 0.00 37.37 3.85
2185 5378 2.614057 GGAGATGCCCTAATGTTCGTTG 59.386 50.000 0.00 0.00 0.00 4.10
2186 5379 3.270877 GAGATGCCCTAATGTTCGTTGT 58.729 45.455 0.00 0.00 0.00 3.32
2187 5380 3.686016 AGATGCCCTAATGTTCGTTGTT 58.314 40.909 0.00 0.00 0.00 2.83
2188 5381 4.079253 AGATGCCCTAATGTTCGTTGTTT 58.921 39.130 0.00 0.00 0.00 2.83
2189 5382 4.522789 AGATGCCCTAATGTTCGTTGTTTT 59.477 37.500 0.00 0.00 0.00 2.43
2190 5383 4.231718 TGCCCTAATGTTCGTTGTTTTC 57.768 40.909 0.00 0.00 0.00 2.29
2191 5384 3.231160 GCCCTAATGTTCGTTGTTTTCG 58.769 45.455 0.00 0.00 0.00 3.46
2192 5385 3.817238 CCCTAATGTTCGTTGTTTTCGG 58.183 45.455 0.00 0.00 0.00 4.30
2193 5386 3.499157 CCCTAATGTTCGTTGTTTTCGGA 59.501 43.478 0.00 0.00 0.00 4.55
2194 5387 4.023878 CCCTAATGTTCGTTGTTTTCGGAA 60.024 41.667 0.00 0.00 0.00 4.30
2195 5388 4.907582 CCTAATGTTCGTTGTTTTCGGAAC 59.092 41.667 0.00 0.00 0.00 3.62
2209 5402 3.284197 GGAACGCTGTATATGCCGT 57.716 52.632 0.00 0.00 0.00 5.68
2210 5403 0.859232 GGAACGCTGTATATGCCGTG 59.141 55.000 0.00 0.00 0.00 4.94
2211 5404 1.567504 GAACGCTGTATATGCCGTGT 58.432 50.000 0.00 0.00 0.00 4.49
2212 5405 1.521423 GAACGCTGTATATGCCGTGTC 59.479 52.381 2.21 0.00 0.00 3.67
2213 5406 0.458260 ACGCTGTATATGCCGTGTCA 59.542 50.000 0.00 0.00 0.00 3.58
2214 5407 1.131771 CGCTGTATATGCCGTGTCAG 58.868 55.000 0.00 0.00 0.00 3.51
2215 5408 0.861837 GCTGTATATGCCGTGTCAGC 59.138 55.000 0.00 0.00 40.66 4.26
2216 5409 1.539065 GCTGTATATGCCGTGTCAGCT 60.539 52.381 11.23 0.00 42.98 4.24
2217 5410 2.130395 CTGTATATGCCGTGTCAGCTG 58.870 52.381 7.63 7.63 0.00 4.24
2218 5411 0.861837 GTATATGCCGTGTCAGCTGC 59.138 55.000 9.47 4.92 0.00 5.25
2219 5412 0.752658 TATATGCCGTGTCAGCTGCT 59.247 50.000 9.47 0.00 0.00 4.24
2220 5413 0.531532 ATATGCCGTGTCAGCTGCTC 60.532 55.000 9.47 5.29 0.00 4.26
2221 5414 2.889154 TATGCCGTGTCAGCTGCTCG 62.889 60.000 9.47 15.77 0.00 5.03
2223 5416 2.807045 CCGTGTCAGCTGCTCGTC 60.807 66.667 21.90 10.49 0.00 4.20
2224 5417 2.256764 CGTGTCAGCTGCTCGTCT 59.743 61.111 9.47 0.00 0.00 4.18
2225 5418 2.085262 CGTGTCAGCTGCTCGTCTG 61.085 63.158 9.47 0.00 0.00 3.51
2226 5419 1.006805 GTGTCAGCTGCTCGTCTGT 60.007 57.895 9.47 0.00 0.00 3.41
2227 5420 1.006314 GTGTCAGCTGCTCGTCTGTC 61.006 60.000 9.47 0.00 0.00 3.51
2228 5421 1.175347 TGTCAGCTGCTCGTCTGTCT 61.175 55.000 9.47 0.00 0.00 3.41
2229 5422 0.038709 GTCAGCTGCTCGTCTGTCTT 60.039 55.000 9.47 0.00 0.00 3.01
2230 5423 0.676184 TCAGCTGCTCGTCTGTCTTT 59.324 50.000 9.47 0.00 0.00 2.52
2231 5424 1.069204 TCAGCTGCTCGTCTGTCTTTT 59.931 47.619 9.47 0.00 0.00 2.27
2232 5425 1.869767 CAGCTGCTCGTCTGTCTTTTT 59.130 47.619 0.00 0.00 0.00 1.94
2233 5426 1.869767 AGCTGCTCGTCTGTCTTTTTG 59.130 47.619 0.00 0.00 0.00 2.44
2234 5427 1.069636 GCTGCTCGTCTGTCTTTTTGG 60.070 52.381 0.00 0.00 0.00 3.28
2235 5428 2.213499 CTGCTCGTCTGTCTTTTTGGT 58.787 47.619 0.00 0.00 0.00 3.67
2236 5429 1.939934 TGCTCGTCTGTCTTTTTGGTG 59.060 47.619 0.00 0.00 0.00 4.17
2237 5430 1.334149 GCTCGTCTGTCTTTTTGGTGC 60.334 52.381 0.00 0.00 0.00 5.01
2238 5431 0.934496 TCGTCTGTCTTTTTGGTGCG 59.066 50.000 0.00 0.00 0.00 5.34
2239 5432 0.657368 CGTCTGTCTTTTTGGTGCGC 60.657 55.000 0.00 0.00 0.00 6.09
2240 5433 0.657368 GTCTGTCTTTTTGGTGCGCG 60.657 55.000 0.00 0.00 0.00 6.86
2241 5434 1.092921 TCTGTCTTTTTGGTGCGCGT 61.093 50.000 8.43 0.00 0.00 6.01
2242 5435 0.657368 CTGTCTTTTTGGTGCGCGTC 60.657 55.000 8.43 0.00 0.00 5.19
2243 5436 1.092921 TGTCTTTTTGGTGCGCGTCT 61.093 50.000 8.43 0.00 0.00 4.18
2244 5437 0.657368 GTCTTTTTGGTGCGCGTCTG 60.657 55.000 8.43 0.00 0.00 3.51
2245 5438 1.092921 TCTTTTTGGTGCGCGTCTGT 61.093 50.000 8.43 0.00 0.00 3.41
2246 5439 0.248458 CTTTTTGGTGCGCGTCTGTT 60.248 50.000 8.43 0.00 0.00 3.16
2247 5440 0.171455 TTTTTGGTGCGCGTCTGTTT 59.829 45.000 8.43 0.00 0.00 2.83
2248 5441 0.171455 TTTTGGTGCGCGTCTGTTTT 59.829 45.000 8.43 0.00 0.00 2.43
2249 5442 1.015109 TTTGGTGCGCGTCTGTTTTA 58.985 45.000 8.43 0.00 0.00 1.52
2250 5443 0.584396 TTGGTGCGCGTCTGTTTTAG 59.416 50.000 8.43 0.00 0.00 1.85
2251 5444 0.249531 TGGTGCGCGTCTGTTTTAGA 60.250 50.000 8.43 0.00 0.00 2.10
2252 5445 0.863144 GGTGCGCGTCTGTTTTAGAA 59.137 50.000 8.43 0.00 37.12 2.10
2253 5446 1.262151 GGTGCGCGTCTGTTTTAGAAA 59.738 47.619 8.43 0.00 37.12 2.52
2254 5447 2.286536 GGTGCGCGTCTGTTTTAGAAAA 60.287 45.455 8.43 0.00 37.12 2.29
2255 5448 2.712466 GTGCGCGTCTGTTTTAGAAAAC 59.288 45.455 8.43 10.32 46.40 2.43
2295 5488 9.961265 ATGAATACAATTGCAAATGATACAGAG 57.039 29.630 21.10 0.00 0.00 3.35
2296 5489 9.176460 TGAATACAATTGCAAATGATACAGAGA 57.824 29.630 21.10 0.00 0.00 3.10
2297 5490 9.443283 GAATACAATTGCAAATGATACAGAGAC 57.557 33.333 21.10 0.00 0.00 3.36
2298 5491 6.822667 ACAATTGCAAATGATACAGAGACA 57.177 33.333 21.10 0.00 0.00 3.41
2299 5492 6.849502 ACAATTGCAAATGATACAGAGACAG 58.150 36.000 21.10 0.00 0.00 3.51
2300 5493 6.432162 ACAATTGCAAATGATACAGAGACAGT 59.568 34.615 21.10 0.00 0.00 3.55
2301 5494 7.607607 ACAATTGCAAATGATACAGAGACAGTA 59.392 33.333 21.10 0.00 0.00 2.74
2302 5495 8.618677 CAATTGCAAATGATACAGAGACAGTAT 58.381 33.333 8.93 0.00 35.01 2.12
2303 5496 7.543947 TTGCAAATGATACAGAGACAGTATG 57.456 36.000 0.00 0.00 46.00 2.39
2304 5497 6.877236 TGCAAATGATACAGAGACAGTATGA 58.123 36.000 0.00 0.00 39.69 2.15
2305 5498 7.330262 TGCAAATGATACAGAGACAGTATGAA 58.670 34.615 0.00 0.00 39.69 2.57
2306 5499 7.493645 TGCAAATGATACAGAGACAGTATGAAG 59.506 37.037 0.00 0.00 39.69 3.02
2307 5500 7.518052 GCAAATGATACAGAGACAGTATGAAGC 60.518 40.741 0.00 0.00 39.69 3.86
2308 5501 6.975196 ATGATACAGAGACAGTATGAAGCT 57.025 37.500 0.00 0.00 39.69 3.74
2309 5502 6.141560 TGATACAGAGACAGTATGAAGCTG 57.858 41.667 0.00 0.00 39.69 4.24
2310 5503 3.883830 ACAGAGACAGTATGAAGCTGG 57.116 47.619 0.00 0.00 39.69 4.85
2311 5504 3.435275 ACAGAGACAGTATGAAGCTGGA 58.565 45.455 0.00 0.00 39.69 3.86
2312 5505 3.194542 ACAGAGACAGTATGAAGCTGGAC 59.805 47.826 0.00 0.00 39.69 4.02
2313 5506 3.446873 CAGAGACAGTATGAAGCTGGACT 59.553 47.826 0.00 0.00 39.69 3.85
2314 5507 3.446873 AGAGACAGTATGAAGCTGGACTG 59.553 47.826 13.23 13.23 43.97 3.51
2315 5508 2.093764 AGACAGTATGAAGCTGGACTGC 60.094 50.000 14.26 9.23 42.49 4.40
2316 5509 1.284657 CAGTATGAAGCTGGACTGCG 58.715 55.000 0.00 0.00 39.69 5.18
2317 5510 1.134995 CAGTATGAAGCTGGACTGCGA 60.135 52.381 0.00 0.00 39.69 5.10
2318 5511 1.550524 AGTATGAAGCTGGACTGCGAA 59.449 47.619 0.00 0.00 38.13 4.70
2319 5512 1.661112 GTATGAAGCTGGACTGCGAAC 59.339 52.381 0.00 0.00 38.13 3.95
2320 5513 1.016130 ATGAAGCTGGACTGCGAACG 61.016 55.000 0.00 0.00 38.13 3.95
2321 5514 1.664965 GAAGCTGGACTGCGAACGT 60.665 57.895 0.00 0.00 38.13 3.99
2322 5515 0.388134 GAAGCTGGACTGCGAACGTA 60.388 55.000 0.00 0.00 38.13 3.57
2323 5516 0.246635 AAGCTGGACTGCGAACGTAT 59.753 50.000 0.00 0.00 38.13 3.06
2324 5517 1.100510 AGCTGGACTGCGAACGTATA 58.899 50.000 0.00 0.00 38.13 1.47
2325 5518 1.681793 AGCTGGACTGCGAACGTATAT 59.318 47.619 0.00 0.00 38.13 0.86
2326 5519 2.882761 AGCTGGACTGCGAACGTATATA 59.117 45.455 0.00 0.00 38.13 0.86
2327 5520 2.978489 GCTGGACTGCGAACGTATATAC 59.022 50.000 2.53 2.53 0.00 1.47
2328 5521 3.304525 GCTGGACTGCGAACGTATATACT 60.305 47.826 11.05 0.00 0.00 2.12
2329 5522 4.792057 GCTGGACTGCGAACGTATATACTT 60.792 45.833 11.05 0.00 0.00 2.24
2330 5523 4.603985 TGGACTGCGAACGTATATACTTG 58.396 43.478 11.05 0.00 0.00 3.16
2331 5524 3.424529 GGACTGCGAACGTATATACTTGC 59.575 47.826 11.05 8.91 0.00 4.01
2332 5525 3.378339 ACTGCGAACGTATATACTTGCC 58.622 45.455 11.05 0.00 0.00 4.52
2333 5526 3.181484 ACTGCGAACGTATATACTTGCCA 60.181 43.478 11.05 1.03 0.00 4.92
2334 5527 3.117794 TGCGAACGTATATACTTGCCAC 58.882 45.455 11.05 0.00 0.00 5.01
2335 5528 3.181484 TGCGAACGTATATACTTGCCACT 60.181 43.478 11.05 0.00 0.00 4.00
2336 5529 3.181774 GCGAACGTATATACTTGCCACTG 59.818 47.826 11.05 0.00 0.00 3.66
2337 5530 3.181774 CGAACGTATATACTTGCCACTGC 59.818 47.826 11.05 0.00 38.26 4.40
2338 5531 3.107642 ACGTATATACTTGCCACTGCC 57.892 47.619 11.05 0.00 36.33 4.85
2339 5532 2.698797 ACGTATATACTTGCCACTGCCT 59.301 45.455 11.05 0.00 36.33 4.75
2340 5533 3.059884 CGTATATACTTGCCACTGCCTG 58.940 50.000 11.05 0.00 36.33 4.85
2341 5534 2.645838 ATATACTTGCCACTGCCTGG 57.354 50.000 0.00 0.00 44.08 4.45
2342 5535 0.546122 TATACTTGCCACTGCCTGGG 59.454 55.000 0.00 0.00 41.02 4.45
2343 5536 1.500783 ATACTTGCCACTGCCTGGGT 61.501 55.000 0.00 0.00 41.02 4.51
2344 5537 2.124507 TACTTGCCACTGCCTGGGTC 62.125 60.000 0.00 0.00 41.02 4.46
2345 5538 3.177884 TTGCCACTGCCTGGGTCT 61.178 61.111 0.00 0.00 41.02 3.85
2346 5539 2.703675 CTTGCCACTGCCTGGGTCTT 62.704 60.000 0.00 0.00 41.02 3.01
2347 5540 2.116125 GCCACTGCCTGGGTCTTT 59.884 61.111 0.00 0.00 41.02 2.52
2348 5541 2.270986 GCCACTGCCTGGGTCTTTG 61.271 63.158 0.00 0.00 41.02 2.77
2349 5542 1.455849 CCACTGCCTGGGTCTTTGA 59.544 57.895 0.00 0.00 36.18 2.69
2350 5543 0.178992 CCACTGCCTGGGTCTTTGAA 60.179 55.000 0.00 0.00 36.18 2.69
2351 5544 1.691196 CACTGCCTGGGTCTTTGAAA 58.309 50.000 0.00 0.00 0.00 2.69
2352 5545 2.242043 CACTGCCTGGGTCTTTGAAAT 58.758 47.619 0.00 0.00 0.00 2.17
2353 5546 2.629617 CACTGCCTGGGTCTTTGAAATT 59.370 45.455 0.00 0.00 0.00 1.82
2354 5547 2.893489 ACTGCCTGGGTCTTTGAAATTC 59.107 45.455 0.00 0.00 0.00 2.17
2355 5548 3.160269 CTGCCTGGGTCTTTGAAATTCT 58.840 45.455 0.00 0.00 0.00 2.40
2356 5549 3.575687 CTGCCTGGGTCTTTGAAATTCTT 59.424 43.478 0.00 0.00 0.00 2.52
2357 5550 3.966665 TGCCTGGGTCTTTGAAATTCTTT 59.033 39.130 0.00 0.00 0.00 2.52
2358 5551 4.039124 TGCCTGGGTCTTTGAAATTCTTTC 59.961 41.667 0.00 0.00 40.08 2.62
2359 5552 4.281941 GCCTGGGTCTTTGAAATTCTTTCT 59.718 41.667 0.00 0.00 40.32 2.52
2360 5553 5.476945 GCCTGGGTCTTTGAAATTCTTTCTA 59.523 40.000 0.00 0.00 40.32 2.10
2361 5554 6.015434 GCCTGGGTCTTTGAAATTCTTTCTAA 60.015 38.462 0.00 0.03 40.32 2.10
2362 5555 7.310052 GCCTGGGTCTTTGAAATTCTTTCTAAT 60.310 37.037 0.00 0.00 40.32 1.73
2363 5556 9.243105 CCTGGGTCTTTGAAATTCTTTCTAATA 57.757 33.333 0.00 0.00 40.32 0.98
2389 5582 9.892130 ATTTTAGATAGAAGAAAATCTGGACGT 57.108 29.630 0.00 0.00 34.36 4.34
2390 5583 9.720769 TTTTAGATAGAAGAAAATCTGGACGTT 57.279 29.630 0.00 0.00 34.36 3.99
2391 5584 8.703604 TTAGATAGAAGAAAATCTGGACGTTG 57.296 34.615 0.00 0.00 34.36 4.10
2392 5585 6.109359 AGATAGAAGAAAATCTGGACGTTGG 58.891 40.000 0.00 0.00 31.25 3.77
2393 5586 4.351874 AGAAGAAAATCTGGACGTTGGA 57.648 40.909 0.00 0.00 0.00 3.53
2394 5587 4.714632 AGAAGAAAATCTGGACGTTGGAA 58.285 39.130 0.00 0.00 0.00 3.53
2395 5588 5.130350 AGAAGAAAATCTGGACGTTGGAAA 58.870 37.500 0.00 0.00 0.00 3.13
2396 5589 5.592688 AGAAGAAAATCTGGACGTTGGAAAA 59.407 36.000 0.00 0.00 0.00 2.29
2397 5590 6.265422 AGAAGAAAATCTGGACGTTGGAAAAT 59.735 34.615 0.00 0.00 0.00 1.82
2398 5591 7.447238 AGAAGAAAATCTGGACGTTGGAAAATA 59.553 33.333 0.00 0.00 0.00 1.40
2399 5592 7.519032 AGAAAATCTGGACGTTGGAAAATAA 57.481 32.000 0.00 0.00 0.00 1.40
2400 5593 7.947282 AGAAAATCTGGACGTTGGAAAATAAA 58.053 30.769 0.00 0.00 0.00 1.40
2401 5594 8.417884 AGAAAATCTGGACGTTGGAAAATAAAA 58.582 29.630 0.00 0.00 0.00 1.52
2402 5595 8.950208 AAAATCTGGACGTTGGAAAATAAAAA 57.050 26.923 0.00 0.00 0.00 1.94
2403 5596 9.554395 AAAATCTGGACGTTGGAAAATAAAAAT 57.446 25.926 0.00 0.00 0.00 1.82
2405 5598 9.855021 AATCTGGACGTTGGAAAATAAAAATAG 57.145 29.630 0.00 0.00 0.00 1.73
2406 5599 7.822658 TCTGGACGTTGGAAAATAAAAATAGG 58.177 34.615 0.00 0.00 0.00 2.57
2407 5600 6.391537 TGGACGTTGGAAAATAAAAATAGGC 58.608 36.000 0.00 0.00 0.00 3.93
2408 5601 6.015350 TGGACGTTGGAAAATAAAAATAGGCA 60.015 34.615 0.00 0.00 0.00 4.75
2409 5602 7.039270 GGACGTTGGAAAATAAAAATAGGCAT 58.961 34.615 0.00 0.00 0.00 4.40
2410 5603 7.222031 GGACGTTGGAAAATAAAAATAGGCATC 59.778 37.037 0.00 0.00 0.00 3.91
2411 5604 6.750039 ACGTTGGAAAATAAAAATAGGCATCG 59.250 34.615 0.00 0.00 0.00 3.84
2412 5605 6.970043 CGTTGGAAAATAAAAATAGGCATCGA 59.030 34.615 0.00 0.00 0.00 3.59
2413 5606 7.044314 CGTTGGAAAATAAAAATAGGCATCGAC 60.044 37.037 0.00 0.00 0.00 4.20
2414 5607 6.801575 TGGAAAATAAAAATAGGCATCGACC 58.198 36.000 0.00 0.00 0.00 4.79
2415 5608 5.912955 GGAAAATAAAAATAGGCATCGACCG 59.087 40.000 0.00 0.00 33.69 4.79
2416 5609 4.483476 AATAAAAATAGGCATCGACCGC 57.517 40.909 0.00 0.00 33.69 5.68
2417 5610 0.655733 AAAAATAGGCATCGACCGCG 59.344 50.000 0.00 0.00 39.35 6.46
2418 5611 1.772063 AAAATAGGCATCGACCGCGC 61.772 55.000 0.00 0.00 37.46 6.86
2419 5612 4.664677 ATAGGCATCGACCGCGCC 62.665 66.667 0.00 12.65 46.62 6.53
2449 5642 4.373116 AGGCAACGACGGACGCAT 62.373 61.111 0.00 0.00 46.94 4.73
2450 5643 4.147322 GGCAACGACGGACGCATG 62.147 66.667 0.00 1.17 46.94 4.06
2451 5644 4.147322 GCAACGACGGACGCATGG 62.147 66.667 0.00 0.00 46.94 3.66
2452 5645 4.147322 CAACGACGGACGCATGGC 62.147 66.667 0.00 0.00 46.94 4.40
2453 5646 4.373116 AACGACGGACGCATGGCT 62.373 61.111 0.00 0.00 46.94 4.75
2454 5647 2.997075 AACGACGGACGCATGGCTA 61.997 57.895 0.00 0.00 46.94 3.93
2455 5648 2.202690 CGACGGACGCATGGCTAA 60.203 61.111 0.00 0.00 34.51 3.09
2456 5649 1.807981 CGACGGACGCATGGCTAAA 60.808 57.895 0.00 0.00 34.51 1.85
2457 5650 1.713830 GACGGACGCATGGCTAAAC 59.286 57.895 0.00 0.00 0.00 2.01
2458 5651 0.739813 GACGGACGCATGGCTAAACT 60.740 55.000 0.00 0.00 0.00 2.66
2459 5652 1.019278 ACGGACGCATGGCTAAACTG 61.019 55.000 0.00 0.00 0.00 3.16
2460 5653 0.739462 CGGACGCATGGCTAAACTGA 60.739 55.000 0.00 0.00 0.00 3.41
2461 5654 1.668419 GGACGCATGGCTAAACTGAT 58.332 50.000 0.00 0.00 0.00 2.90
2462 5655 2.801699 CGGACGCATGGCTAAACTGATA 60.802 50.000 0.00 0.00 0.00 2.15
2463 5656 2.802816 GGACGCATGGCTAAACTGATAG 59.197 50.000 0.00 0.00 0.00 2.08
2464 5657 2.213499 ACGCATGGCTAAACTGATAGC 58.787 47.619 0.00 8.15 46.06 2.97
2465 5658 2.158900 ACGCATGGCTAAACTGATAGCT 60.159 45.455 13.79 0.00 46.04 3.32
2466 5659 2.222678 CGCATGGCTAAACTGATAGCTG 59.777 50.000 0.00 8.59 46.04 4.24
2467 5660 2.031333 GCATGGCTAAACTGATAGCTGC 60.031 50.000 0.00 12.83 46.04 5.25
2468 5661 2.332063 TGGCTAAACTGATAGCTGCC 57.668 50.000 0.00 0.00 46.04 4.85
2469 5662 1.134098 TGGCTAAACTGATAGCTGCCC 60.134 52.381 0.00 0.00 46.04 5.36
2470 5663 1.141858 GGCTAAACTGATAGCTGCCCT 59.858 52.381 0.00 0.00 46.04 5.19
2471 5664 2.216898 GCTAAACTGATAGCTGCCCTG 58.783 52.381 0.00 0.00 43.94 4.45
2472 5665 2.216898 CTAAACTGATAGCTGCCCTGC 58.783 52.381 0.00 0.00 0.00 4.85
2473 5666 0.329261 AAACTGATAGCTGCCCTGCA 59.671 50.000 0.00 0.00 36.92 4.41
2482 5675 4.051167 TGCCCTGCAGGTCCATGG 62.051 66.667 30.63 15.52 38.26 3.66
2483 5676 4.052518 GCCCTGCAGGTCCATGGT 62.053 66.667 30.63 0.00 38.26 3.55
2484 5677 2.273449 CCCTGCAGGTCCATGGTC 59.727 66.667 30.63 5.95 0.00 4.02
2485 5678 2.605607 CCCTGCAGGTCCATGGTCA 61.606 63.158 30.63 2.78 0.00 4.02
2486 5679 1.379916 CCTGCAGGTCCATGGTCAA 59.620 57.895 25.53 0.00 0.00 3.18
2487 5680 0.962356 CCTGCAGGTCCATGGTCAAC 60.962 60.000 25.53 2.13 0.00 3.18
2488 5681 0.250858 CTGCAGGTCCATGGTCAACA 60.251 55.000 12.58 4.78 0.00 3.33
2489 5682 0.537143 TGCAGGTCCATGGTCAACAC 60.537 55.000 12.58 1.29 0.00 3.32
2490 5683 0.250901 GCAGGTCCATGGTCAACACT 60.251 55.000 12.58 0.00 0.00 3.55
2491 5684 1.819305 GCAGGTCCATGGTCAACACTT 60.819 52.381 12.58 0.00 0.00 3.16
2492 5685 2.586425 CAGGTCCATGGTCAACACTTT 58.414 47.619 12.58 0.00 0.00 2.66
2493 5686 2.554032 CAGGTCCATGGTCAACACTTTC 59.446 50.000 12.58 0.00 0.00 2.62
2494 5687 2.443255 AGGTCCATGGTCAACACTTTCT 59.557 45.455 12.58 0.00 0.00 2.52
2495 5688 2.814336 GGTCCATGGTCAACACTTTCTC 59.186 50.000 12.58 0.00 0.00 2.87
2496 5689 2.814336 GTCCATGGTCAACACTTTCTCC 59.186 50.000 12.58 0.00 0.00 3.71
2497 5690 1.806542 CCATGGTCAACACTTTCTCCG 59.193 52.381 2.57 0.00 0.00 4.63
2498 5691 1.806542 CATGGTCAACACTTTCTCCGG 59.193 52.381 0.00 0.00 0.00 5.14
2499 5692 0.834612 TGGTCAACACTTTCTCCGGT 59.165 50.000 0.00 0.00 0.00 5.28
2500 5693 1.202604 TGGTCAACACTTTCTCCGGTC 60.203 52.381 0.00 0.00 0.00 4.79
2501 5694 1.509703 GTCAACACTTTCTCCGGTCC 58.490 55.000 0.00 0.00 0.00 4.46
2502 5695 1.124780 TCAACACTTTCTCCGGTCCA 58.875 50.000 0.00 0.00 0.00 4.02
2503 5696 1.070134 TCAACACTTTCTCCGGTCCAG 59.930 52.381 0.00 0.00 0.00 3.86
2504 5697 0.250338 AACACTTTCTCCGGTCCAGC 60.250 55.000 0.00 0.00 0.00 4.85
2505 5698 1.122019 ACACTTTCTCCGGTCCAGCT 61.122 55.000 0.00 0.00 0.00 4.24
2506 5699 0.035458 CACTTTCTCCGGTCCAGCTT 59.965 55.000 0.00 0.00 0.00 3.74
2507 5700 0.765510 ACTTTCTCCGGTCCAGCTTT 59.234 50.000 0.00 0.00 0.00 3.51
2508 5701 1.160137 CTTTCTCCGGTCCAGCTTTG 58.840 55.000 0.00 0.00 0.00 2.77
2509 5702 0.889186 TTTCTCCGGTCCAGCTTTGC 60.889 55.000 0.00 0.00 0.00 3.68
2510 5703 2.747855 CTCCGGTCCAGCTTTGCC 60.748 66.667 0.00 0.00 0.00 4.52
2511 5704 3.249189 TCCGGTCCAGCTTTGCCT 61.249 61.111 0.00 0.00 0.00 4.75
2512 5705 2.747855 CCGGTCCAGCTTTGCCTC 60.748 66.667 0.00 0.00 0.00 4.70
2513 5706 2.348998 CGGTCCAGCTTTGCCTCT 59.651 61.111 0.00 0.00 0.00 3.69
2514 5707 1.743252 CGGTCCAGCTTTGCCTCTC 60.743 63.158 0.00 0.00 0.00 3.20
2515 5708 1.376466 GGTCCAGCTTTGCCTCTCA 59.624 57.895 0.00 0.00 0.00 3.27
2516 5709 0.957888 GGTCCAGCTTTGCCTCTCAC 60.958 60.000 0.00 0.00 0.00 3.51
2517 5710 0.250467 GTCCAGCTTTGCCTCTCACA 60.250 55.000 0.00 0.00 0.00 3.58
2518 5711 0.473755 TCCAGCTTTGCCTCTCACAA 59.526 50.000 0.00 0.00 0.00 3.33
2519 5712 1.074405 TCCAGCTTTGCCTCTCACAAT 59.926 47.619 0.00 0.00 0.00 2.71
2520 5713 1.471684 CCAGCTTTGCCTCTCACAATC 59.528 52.381 0.00 0.00 0.00 2.67
2521 5714 1.471684 CAGCTTTGCCTCTCACAATCC 59.528 52.381 0.00 0.00 0.00 3.01
2522 5715 1.353694 AGCTTTGCCTCTCACAATCCT 59.646 47.619 0.00 0.00 0.00 3.24
2523 5716 1.471684 GCTTTGCCTCTCACAATCCTG 59.528 52.381 0.00 0.00 0.00 3.86
2524 5717 2.089980 CTTTGCCTCTCACAATCCTGG 58.910 52.381 0.00 0.00 0.00 4.45
2525 5718 0.322816 TTGCCTCTCACAATCCTGGC 60.323 55.000 0.00 0.00 40.62 4.85
2526 5719 1.300963 GCCTCTCACAATCCTGGCA 59.699 57.895 0.00 0.00 40.04 4.92
2527 5720 0.106819 GCCTCTCACAATCCTGGCAT 60.107 55.000 0.00 0.00 40.04 4.40
2528 5721 1.964552 CCTCTCACAATCCTGGCATC 58.035 55.000 0.00 0.00 0.00 3.91
2529 5722 1.579698 CTCTCACAATCCTGGCATCG 58.420 55.000 0.00 0.00 0.00 3.84
2530 5723 0.462581 TCTCACAATCCTGGCATCGC 60.463 55.000 0.00 0.00 0.00 4.58
2531 5724 0.745486 CTCACAATCCTGGCATCGCA 60.745 55.000 0.00 0.00 0.00 5.10
2532 5725 0.322366 TCACAATCCTGGCATCGCAA 60.322 50.000 0.00 0.00 0.00 4.85
2533 5726 0.742505 CACAATCCTGGCATCGCAAT 59.257 50.000 0.00 0.00 0.00 3.56
2534 5727 1.027357 ACAATCCTGGCATCGCAATC 58.973 50.000 0.00 0.00 0.00 2.67
2535 5728 1.315690 CAATCCTGGCATCGCAATCT 58.684 50.000 0.00 0.00 0.00 2.40
2536 5729 1.266175 CAATCCTGGCATCGCAATCTC 59.734 52.381 0.00 0.00 0.00 2.75
2537 5730 0.602106 ATCCTGGCATCGCAATCTCG 60.602 55.000 0.00 0.00 0.00 4.04
2538 5731 1.227350 CCTGGCATCGCAATCTCGA 60.227 57.895 0.00 0.00 43.09 4.04
2539 5732 0.811219 CCTGGCATCGCAATCTCGAA 60.811 55.000 0.00 0.00 42.15 3.71
2540 5733 1.224075 CTGGCATCGCAATCTCGAAT 58.776 50.000 0.00 0.00 42.15 3.34
2541 5734 0.939419 TGGCATCGCAATCTCGAATG 59.061 50.000 0.00 0.00 42.15 2.67
2542 5735 0.385223 GGCATCGCAATCTCGAATGC 60.385 55.000 7.32 7.32 42.15 3.56
2543 5736 0.305617 GCATCGCAATCTCGAATGCA 59.694 50.000 15.21 0.00 42.68 3.96
2544 5737 1.069432 GCATCGCAATCTCGAATGCAT 60.069 47.619 15.21 0.00 42.68 3.96
2545 5738 2.835883 CATCGCAATCTCGAATGCATC 58.164 47.619 15.21 0.00 42.68 3.91
2546 5739 1.938625 TCGCAATCTCGAATGCATCA 58.061 45.000 15.21 0.00 42.68 3.07
2547 5740 2.278854 TCGCAATCTCGAATGCATCAA 58.721 42.857 15.21 0.00 42.68 2.57
2548 5741 2.874086 TCGCAATCTCGAATGCATCAAT 59.126 40.909 15.21 0.00 42.68 2.57
2549 5742 3.059393 TCGCAATCTCGAATGCATCAATC 60.059 43.478 15.21 0.00 42.68 2.67
2550 5743 3.303526 CGCAATCTCGAATGCATCAATCA 60.304 43.478 15.21 0.00 42.68 2.57
2551 5744 3.973135 GCAATCTCGAATGCATCAATCAC 59.027 43.478 0.00 0.00 42.12 3.06
2552 5745 4.261072 GCAATCTCGAATGCATCAATCACT 60.261 41.667 0.00 0.00 42.12 3.41
2553 5746 5.732528 GCAATCTCGAATGCATCAATCACTT 60.733 40.000 0.00 0.00 42.12 3.16
2554 5747 6.263344 CAATCTCGAATGCATCAATCACTTT 58.737 36.000 0.00 0.00 0.00 2.66
2555 5748 5.885230 TCTCGAATGCATCAATCACTTTT 57.115 34.783 0.00 0.00 0.00 2.27
2556 5749 6.258230 TCTCGAATGCATCAATCACTTTTT 57.742 33.333 0.00 0.00 0.00 1.94
2557 5750 6.317088 TCTCGAATGCATCAATCACTTTTTC 58.683 36.000 0.00 0.00 0.00 2.29
2558 5751 6.011476 TCGAATGCATCAATCACTTTTTCA 57.989 33.333 0.00 0.00 0.00 2.69
2559 5752 6.088173 TCGAATGCATCAATCACTTTTTCAG 58.912 36.000 0.00 0.00 0.00 3.02
2560 5753 5.220154 CGAATGCATCAATCACTTTTTCAGC 60.220 40.000 0.00 0.00 0.00 4.26
2561 5754 3.916761 TGCATCAATCACTTTTTCAGCC 58.083 40.909 0.00 0.00 0.00 4.85
2562 5755 3.575256 TGCATCAATCACTTTTTCAGCCT 59.425 39.130 0.00 0.00 0.00 4.58
2563 5756 3.924686 GCATCAATCACTTTTTCAGCCTG 59.075 43.478 0.00 0.00 0.00 4.85
2564 5757 3.648339 TCAATCACTTTTTCAGCCTGC 57.352 42.857 0.00 0.00 0.00 4.85
2565 5758 2.030893 TCAATCACTTTTTCAGCCTGCG 60.031 45.455 0.00 0.00 0.00 5.18
2566 5759 1.896220 ATCACTTTTTCAGCCTGCGA 58.104 45.000 0.00 0.00 0.00 5.10
2567 5760 1.674359 TCACTTTTTCAGCCTGCGAA 58.326 45.000 0.00 0.00 0.00 4.70
2568 5761 1.333619 TCACTTTTTCAGCCTGCGAAC 59.666 47.619 0.00 0.00 0.00 3.95
2569 5762 0.668535 ACTTTTTCAGCCTGCGAACC 59.331 50.000 0.00 0.00 0.00 3.62
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.446272 CCTTCCTCCGACGAACAGC 60.446 63.158 0.00 0.00 0.00 4.40
1 2 0.109226 GTCCTTCCTCCGACGAACAG 60.109 60.000 0.00 0.00 0.00 3.16
2 3 1.962144 GTCCTTCCTCCGACGAACA 59.038 57.895 0.00 0.00 0.00 3.18
3 4 4.885157 GTCCTTCCTCCGACGAAC 57.115 61.111 0.00 0.00 0.00 3.95
30 31 4.253257 CTCTAGTCGTCGCCGCCC 62.253 72.222 0.00 0.00 0.00 6.13
31 32 4.253257 CCTCTAGTCGTCGCCGCC 62.253 72.222 0.00 0.00 0.00 6.13
32 33 2.103581 CTACCTCTAGTCGTCGCCGC 62.104 65.000 0.00 0.00 0.00 6.53
33 34 1.497223 CCTACCTCTAGTCGTCGCCG 61.497 65.000 0.00 0.00 0.00 6.46
34 35 0.463474 ACCTACCTCTAGTCGTCGCC 60.463 60.000 0.00 0.00 0.00 5.54
35 36 0.656785 CACCTACCTCTAGTCGTCGC 59.343 60.000 0.00 0.00 0.00 5.19
36 37 1.134580 TCCACCTACCTCTAGTCGTCG 60.135 57.143 0.00 0.00 0.00 5.12
37 38 2.563702 CTCCACCTACCTCTAGTCGTC 58.436 57.143 0.00 0.00 0.00 4.20
38 39 1.212441 CCTCCACCTACCTCTAGTCGT 59.788 57.143 0.00 0.00 0.00 4.34
39 40 1.489649 TCCTCCACCTACCTCTAGTCG 59.510 57.143 0.00 0.00 0.00 4.18
40 41 3.558033 CTTCCTCCACCTACCTCTAGTC 58.442 54.545 0.00 0.00 0.00 2.59
41 42 2.358405 GCTTCCTCCACCTACCTCTAGT 60.358 54.545 0.00 0.00 0.00 2.57
42 43 2.312390 GCTTCCTCCACCTACCTCTAG 58.688 57.143 0.00 0.00 0.00 2.43
43 44 1.644337 TGCTTCCTCCACCTACCTCTA 59.356 52.381 0.00 0.00 0.00 2.43
44 45 0.413832 TGCTTCCTCCACCTACCTCT 59.586 55.000 0.00 0.00 0.00 3.69
45 46 0.827368 CTGCTTCCTCCACCTACCTC 59.173 60.000 0.00 0.00 0.00 3.85
46 47 1.268283 GCTGCTTCCTCCACCTACCT 61.268 60.000 0.00 0.00 0.00 3.08
47 48 1.222113 GCTGCTTCCTCCACCTACC 59.778 63.158 0.00 0.00 0.00 3.18
48 49 1.153549 CGCTGCTTCCTCCACCTAC 60.154 63.158 0.00 0.00 0.00 3.18
49 50 2.359169 CCGCTGCTTCCTCCACCTA 61.359 63.158 0.00 0.00 0.00 3.08
50 51 3.710722 CCGCTGCTTCCTCCACCT 61.711 66.667 0.00 0.00 0.00 4.00
64 65 4.944372 CTATCCCCACGTCGCCGC 62.944 72.222 0.00 0.00 37.70 6.53
65 66 4.280494 CCTATCCCCACGTCGCCG 62.280 72.222 0.00 0.00 40.83 6.46
66 67 4.603946 GCCTATCCCCACGTCGCC 62.604 72.222 0.00 0.00 0.00 5.54
67 68 3.537874 AGCCTATCCCCACGTCGC 61.538 66.667 0.00 0.00 0.00 5.19
68 69 1.672854 TTCAGCCTATCCCCACGTCG 61.673 60.000 0.00 0.00 0.00 5.12
69 70 0.105039 CTTCAGCCTATCCCCACGTC 59.895 60.000 0.00 0.00 0.00 4.34
70 71 0.325296 TCTTCAGCCTATCCCCACGT 60.325 55.000 0.00 0.00 0.00 4.49
71 72 1.051812 ATCTTCAGCCTATCCCCACG 58.948 55.000 0.00 0.00 0.00 4.94
72 73 1.544314 GCATCTTCAGCCTATCCCCAC 60.544 57.143 0.00 0.00 0.00 4.61
73 74 0.767375 GCATCTTCAGCCTATCCCCA 59.233 55.000 0.00 0.00 0.00 4.96
74 75 3.641017 GCATCTTCAGCCTATCCCC 57.359 57.895 0.00 0.00 0.00 4.81
82 83 1.160137 AGTGAAACGGCATCTTCAGC 58.840 50.000 0.00 0.00 45.86 4.26
83 84 2.807967 TGAAGTGAAACGGCATCTTCAG 59.192 45.455 0.00 0.00 45.86 3.02
84 85 2.844946 TGAAGTGAAACGGCATCTTCA 58.155 42.857 0.00 0.00 45.86 3.02
85 86 3.751621 CATGAAGTGAAACGGCATCTTC 58.248 45.455 0.00 0.00 45.86 2.87
86 87 2.095059 GCATGAAGTGAAACGGCATCTT 60.095 45.455 0.00 0.00 45.86 2.40
87 88 1.470098 GCATGAAGTGAAACGGCATCT 59.530 47.619 0.00 0.00 45.86 2.90
88 89 1.791555 CGCATGAAGTGAAACGGCATC 60.792 52.381 0.00 0.00 45.86 3.91
89 90 0.168788 CGCATGAAGTGAAACGGCAT 59.831 50.000 0.00 0.00 45.86 4.40
90 91 1.573932 CGCATGAAGTGAAACGGCA 59.426 52.632 0.00 0.00 45.86 5.69
91 92 1.797537 GCGCATGAAGTGAAACGGC 60.798 57.895 0.30 0.00 45.86 5.68
92 93 0.453282 CAGCGCATGAAGTGAAACGG 60.453 55.000 11.47 0.00 45.86 4.44
93 94 0.512518 TCAGCGCATGAAGTGAAACG 59.487 50.000 11.47 0.00 35.45 3.60
94 95 2.686558 TTCAGCGCATGAAGTGAAAC 57.313 45.000 11.47 0.00 43.09 2.78
101 102 3.734597 GCATAAATGGTTCAGCGCATGAA 60.735 43.478 11.47 13.96 45.79 2.57
102 103 2.223548 GCATAAATGGTTCAGCGCATGA 60.224 45.455 11.47 7.90 35.62 3.07
103 104 2.121786 GCATAAATGGTTCAGCGCATG 58.878 47.619 11.47 5.22 0.00 4.06
104 105 1.067516 GGCATAAATGGTTCAGCGCAT 59.932 47.619 11.47 0.00 0.00 4.73
105 106 0.455410 GGCATAAATGGTTCAGCGCA 59.545 50.000 11.47 0.00 0.00 6.09
106 107 0.592247 CGGCATAAATGGTTCAGCGC 60.592 55.000 0.00 0.00 0.00 5.92
107 108 0.592247 GCGGCATAAATGGTTCAGCG 60.592 55.000 0.00 0.00 0.00 5.18
108 109 0.592247 CGCGGCATAAATGGTTCAGC 60.592 55.000 0.00 0.00 0.00 4.26
109 110 0.732571 ACGCGGCATAAATGGTTCAG 59.267 50.000 12.47 0.00 0.00 3.02
110 111 0.449786 CACGCGGCATAAATGGTTCA 59.550 50.000 12.47 0.00 0.00 3.18
111 112 0.865639 GCACGCGGCATAAATGGTTC 60.866 55.000 12.47 0.00 43.97 3.62
112 113 1.138671 GCACGCGGCATAAATGGTT 59.861 52.632 12.47 0.00 43.97 3.67
113 114 2.798009 GCACGCGGCATAAATGGT 59.202 55.556 12.47 0.00 43.97 3.55
114 115 2.352229 CGCACGCGGCATAAATGG 60.352 61.111 12.47 0.00 45.17 3.16
115 116 1.933997 CACGCACGCGGCATAAATG 60.934 57.895 16.70 0.00 45.17 2.32
116 117 1.917782 AACACGCACGCGGCATAAAT 61.918 50.000 16.70 0.00 45.17 1.40
117 118 2.119147 AAACACGCACGCGGCATAAA 62.119 50.000 16.70 0.00 45.17 1.40
118 119 2.119147 AAAACACGCACGCGGCATAA 62.119 50.000 16.70 0.00 45.17 1.90
119 120 2.119147 AAAAACACGCACGCGGCATA 62.119 50.000 16.70 0.00 45.17 3.14
120 121 3.477224 AAAAACACGCACGCGGCAT 62.477 52.632 16.70 0.00 45.17 4.40
121 122 4.180946 AAAAACACGCACGCGGCA 62.181 55.556 16.70 0.00 45.17 5.69
135 136 1.004320 TCTAGCGGAGGCGCAAAAA 60.004 52.632 10.83 0.00 46.35 1.94
136 137 1.447838 CTCTAGCGGAGGCGCAAAA 60.448 57.895 10.83 0.00 46.35 2.44
137 138 2.184322 CTCTAGCGGAGGCGCAAA 59.816 61.111 10.83 0.00 46.35 3.68
138 139 4.514577 GCTCTAGCGGAGGCGCAA 62.515 66.667 10.83 0.00 46.35 4.85
148 149 3.255379 CGTTTCGGGCGCTCTAGC 61.255 66.667 5.36 0.00 37.78 3.42
149 150 2.582498 CCGTTTCGGGCGCTCTAG 60.582 66.667 5.36 0.00 44.15 2.43
159 160 2.648724 GCGCATGCATCCGTTTCG 60.649 61.111 19.57 3.15 42.15 3.46
160 161 2.648724 CGCGCATGCATCCGTTTC 60.649 61.111 19.57 0.00 42.97 2.78
161 162 4.834892 GCGCGCATGCATCCGTTT 62.835 61.111 29.10 0.00 42.97 3.60
169 170 2.012414 CCAACATATGCGCGCATGC 61.012 57.895 46.79 15.81 37.82 4.06
170 171 0.385098 CTCCAACATATGCGCGCATG 60.385 55.000 46.79 37.43 37.82 4.06
171 172 0.532640 TCTCCAACATATGCGCGCAT 60.533 50.000 43.68 43.68 40.19 4.73
172 173 0.532640 ATCTCCAACATATGCGCGCA 60.533 50.000 38.27 38.27 0.00 6.09
173 174 0.110509 CATCTCCAACATATGCGCGC 60.111 55.000 27.26 27.26 0.00 6.86
174 175 1.220529 ACATCTCCAACATATGCGCG 58.779 50.000 0.00 0.00 0.00 6.86
175 176 2.287188 CCAACATCTCCAACATATGCGC 60.287 50.000 0.00 0.00 0.00 6.09
176 177 2.287188 GCCAACATCTCCAACATATGCG 60.287 50.000 1.58 0.00 0.00 4.73
177 178 2.287188 CGCCAACATCTCCAACATATGC 60.287 50.000 1.58 0.00 0.00 3.14
178 179 2.287188 GCGCCAACATCTCCAACATATG 60.287 50.000 0.00 0.00 0.00 1.78
179 180 1.949525 GCGCCAACATCTCCAACATAT 59.050 47.619 0.00 0.00 0.00 1.78
180 181 1.378531 GCGCCAACATCTCCAACATA 58.621 50.000 0.00 0.00 0.00 2.29
181 182 1.315257 GGCGCCAACATCTCCAACAT 61.315 55.000 24.80 0.00 0.00 2.71
182 183 1.971167 GGCGCCAACATCTCCAACA 60.971 57.895 24.80 0.00 0.00 3.33
183 184 2.877691 GGCGCCAACATCTCCAAC 59.122 61.111 24.80 0.00 0.00 3.77
184 185 2.745884 CGGCGCCAACATCTCCAA 60.746 61.111 28.98 0.00 0.00 3.53
221 224 2.164624 GCAGCTCGAGGTAGAAGAAGAA 59.835 50.000 18.15 0.00 0.00 2.52
222 225 1.746220 GCAGCTCGAGGTAGAAGAAGA 59.254 52.381 18.15 0.00 0.00 2.87
246 249 4.218417 AGAAGAGAGAAGAGAGAGTTGTGC 59.782 45.833 0.00 0.00 0.00 4.57
258 261 7.403312 TGAGAGAAACCATAGAAGAGAGAAG 57.597 40.000 0.00 0.00 0.00 2.85
259 262 7.671819 TCTTGAGAGAAACCATAGAAGAGAGAA 59.328 37.037 0.00 0.00 0.00 2.87
263 289 7.330700 GTGTTCTTGAGAGAAACCATAGAAGAG 59.669 40.741 0.00 0.00 43.21 2.85
267 293 5.544176 AGGTGTTCTTGAGAGAAACCATAGA 59.456 40.000 15.89 0.00 43.21 1.98
268 294 5.641209 CAGGTGTTCTTGAGAGAAACCATAG 59.359 44.000 15.89 7.51 43.21 2.23
269 295 5.306937 TCAGGTGTTCTTGAGAGAAACCATA 59.693 40.000 15.89 6.83 43.21 2.74
271 297 3.454447 TCAGGTGTTCTTGAGAGAAACCA 59.546 43.478 15.89 1.52 43.21 3.67
273 299 4.025647 CGTTCAGGTGTTCTTGAGAGAAAC 60.026 45.833 0.00 0.00 43.21 2.78
290 318 1.257936 GTGTGTGTAGTGTGCGTTCAG 59.742 52.381 0.00 0.00 0.00 3.02
291 319 1.282817 GTGTGTGTAGTGTGCGTTCA 58.717 50.000 0.00 0.00 0.00 3.18
296 324 0.300491 CGTGTGTGTGTGTAGTGTGC 59.700 55.000 0.00 0.00 0.00 4.57
315 358 1.168714 GATGGTCTGTTCCTTGGTGC 58.831 55.000 0.00 0.00 0.00 5.01
316 359 1.826385 GGATGGTCTGTTCCTTGGTG 58.174 55.000 0.00 0.00 0.00 4.17
326 369 1.293924 CAAAGCTAGCGGATGGTCTG 58.706 55.000 9.55 0.00 0.00 3.51
330 373 2.537560 CGGCAAAGCTAGCGGATGG 61.538 63.158 9.55 0.00 34.65 3.51
332 375 1.227380 CTCGGCAAAGCTAGCGGAT 60.227 57.895 17.62 0.00 39.97 4.18
333 376 2.184322 CTCGGCAAAGCTAGCGGA 59.816 61.111 9.55 16.75 38.73 5.54
334 377 1.880340 CTCTCGGCAAAGCTAGCGG 60.880 63.158 9.55 11.05 0.00 5.52
336 379 4.116878 CCTCTCGGCAAAGCTAGC 57.883 61.111 6.62 6.62 0.00 3.42
348 391 1.985116 ACCAAGGACGGAGCCTCTC 60.985 63.158 0.00 0.00 37.26 3.20
349 392 2.120718 ACCAAGGACGGAGCCTCT 59.879 61.111 0.00 0.00 37.26 3.69
350 393 1.827399 TTCACCAAGGACGGAGCCTC 61.827 60.000 0.00 0.00 37.26 4.70
351 394 1.201429 ATTCACCAAGGACGGAGCCT 61.201 55.000 0.00 0.00 40.93 4.58
353 396 1.066430 TGTATTCACCAAGGACGGAGC 60.066 52.381 0.00 0.00 0.00 4.70
354 397 2.233922 ACTGTATTCACCAAGGACGGAG 59.766 50.000 0.00 0.00 0.00 4.63
355 398 2.028476 CACTGTATTCACCAAGGACGGA 60.028 50.000 0.00 0.00 0.00 4.69
356 399 2.346803 CACTGTATTCACCAAGGACGG 58.653 52.381 0.00 0.00 0.00 4.79
357 400 2.346803 CCACTGTATTCACCAAGGACG 58.653 52.381 0.00 0.00 0.00 4.79
358 401 2.084546 GCCACTGTATTCACCAAGGAC 58.915 52.381 0.00 0.00 0.00 3.85
366 409 5.643348 CAGAAACATGTAGCCACTGTATTCA 59.357 40.000 0.00 0.00 0.00 2.57
370 413 3.007940 AGCAGAAACATGTAGCCACTGTA 59.992 43.478 0.00 0.00 0.00 2.74
374 417 2.704572 AGAGCAGAAACATGTAGCCAC 58.295 47.619 0.00 0.00 0.00 5.01
821 866 8.577048 AGTTTTGCATGTAGTCTAGTCTAGTA 57.423 34.615 6.77 0.00 0.00 1.82
1100 1152 3.280938 AAGGTGGGCGCTATTGGCA 62.281 57.895 7.64 0.00 41.91 4.92
1439 1491 2.060004 TAGAGCCTTGTCGATCCGCG 62.060 60.000 0.00 0.00 42.69 6.46
1577 4262 1.673400 GGTGCATGTGTGTGTGTGTAA 59.327 47.619 0.00 0.00 0.00 2.41
1781 4972 1.291184 TGCAACGCTGGAGTGATTCG 61.291 55.000 0.00 0.00 0.00 3.34
1807 4998 1.069513 TGGTCACAAGTGGTTACCGAG 59.930 52.381 0.00 0.00 45.12 4.63
1998 5191 2.825387 GATGCCGATGGTGCTGCA 60.825 61.111 0.00 0.00 38.23 4.41
2165 5358 3.270877 ACAACGAACATTAGGGCATCTC 58.729 45.455 0.00 0.00 0.00 2.75
2166 5359 3.350219 ACAACGAACATTAGGGCATCT 57.650 42.857 0.00 0.00 0.00 2.90
2167 5360 4.434713 AAACAACGAACATTAGGGCATC 57.565 40.909 0.00 0.00 0.00 3.91
2168 5361 4.614993 CGAAAACAACGAACATTAGGGCAT 60.615 41.667 0.00 0.00 0.00 4.40
2169 5362 3.304123 CGAAAACAACGAACATTAGGGCA 60.304 43.478 0.00 0.00 0.00 5.36
2170 5363 3.231160 CGAAAACAACGAACATTAGGGC 58.769 45.455 0.00 0.00 0.00 5.19
2171 5364 3.499157 TCCGAAAACAACGAACATTAGGG 59.501 43.478 0.00 0.00 0.00 3.53
2172 5365 4.735662 TCCGAAAACAACGAACATTAGG 57.264 40.909 0.00 0.00 0.00 2.69
2173 5366 4.605594 CGTTCCGAAAACAACGAACATTAG 59.394 41.667 0.00 0.00 46.70 1.73
2174 5367 4.516359 CGTTCCGAAAACAACGAACATTA 58.484 39.130 0.00 0.00 46.70 1.90
2175 5368 3.356145 CGTTCCGAAAACAACGAACATT 58.644 40.909 0.00 0.00 46.70 2.71
2176 5369 2.851764 GCGTTCCGAAAACAACGAACAT 60.852 45.455 8.31 0.00 46.70 2.71
2177 5370 1.529418 GCGTTCCGAAAACAACGAACA 60.529 47.619 8.31 0.00 46.70 3.18
2178 5371 1.106933 GCGTTCCGAAAACAACGAAC 58.893 50.000 8.31 0.00 46.70 3.95
2179 5372 1.008329 AGCGTTCCGAAAACAACGAA 58.992 45.000 8.31 0.00 46.70 3.85
2180 5373 0.302288 CAGCGTTCCGAAAACAACGA 59.698 50.000 8.31 0.00 46.70 3.85
2181 5374 0.027063 ACAGCGTTCCGAAAACAACG 59.973 50.000 0.00 0.00 46.53 4.10
2182 5375 3.531262 ATACAGCGTTCCGAAAACAAC 57.469 42.857 0.00 0.00 0.00 3.32
2183 5376 4.436317 GCATATACAGCGTTCCGAAAACAA 60.436 41.667 0.00 0.00 0.00 2.83
2184 5377 3.062909 GCATATACAGCGTTCCGAAAACA 59.937 43.478 0.00 0.00 0.00 2.83
2185 5378 3.545426 GGCATATACAGCGTTCCGAAAAC 60.545 47.826 0.00 0.00 0.00 2.43
2186 5379 2.610374 GGCATATACAGCGTTCCGAAAA 59.390 45.455 0.00 0.00 0.00 2.29
2187 5380 2.206750 GGCATATACAGCGTTCCGAAA 58.793 47.619 0.00 0.00 0.00 3.46
2188 5381 1.860676 GGCATATACAGCGTTCCGAA 58.139 50.000 0.00 0.00 0.00 4.30
2189 5382 0.318360 CGGCATATACAGCGTTCCGA 60.318 55.000 0.00 0.00 37.79 4.55
2190 5383 0.596600 ACGGCATATACAGCGTTCCG 60.597 55.000 0.00 0.00 40.98 4.30
2191 5384 0.859232 CACGGCATATACAGCGTTCC 59.141 55.000 0.00 0.00 0.00 3.62
2192 5385 1.521423 GACACGGCATATACAGCGTTC 59.479 52.381 0.00 0.00 0.00 3.95
2193 5386 1.134936 TGACACGGCATATACAGCGTT 60.135 47.619 0.00 0.00 0.00 4.84
2194 5387 0.458260 TGACACGGCATATACAGCGT 59.542 50.000 0.00 0.00 0.00 5.07
2195 5388 1.131771 CTGACACGGCATATACAGCG 58.868 55.000 0.00 0.00 0.00 5.18
2196 5389 0.861837 GCTGACACGGCATATACAGC 59.138 55.000 0.00 0.00 42.44 4.40
2197 5390 2.130395 CAGCTGACACGGCATATACAG 58.870 52.381 8.42 0.00 38.37 2.74
2198 5391 1.806247 GCAGCTGACACGGCATATACA 60.806 52.381 20.43 0.00 38.37 2.29
2199 5392 0.861837 GCAGCTGACACGGCATATAC 59.138 55.000 20.43 0.00 38.37 1.47
2200 5393 0.752658 AGCAGCTGACACGGCATATA 59.247 50.000 20.43 0.00 38.37 0.86
2201 5394 0.531532 GAGCAGCTGACACGGCATAT 60.532 55.000 20.43 0.00 38.37 1.78
2202 5395 1.153568 GAGCAGCTGACACGGCATA 60.154 57.895 20.43 0.00 38.37 3.14
2203 5396 2.435586 GAGCAGCTGACACGGCAT 60.436 61.111 20.43 0.00 38.37 4.40
2206 5399 2.807045 GACGAGCAGCTGACACGG 60.807 66.667 20.43 3.45 0.00 4.94
2207 5400 2.085262 CAGACGAGCAGCTGACACG 61.085 63.158 20.43 20.09 34.06 4.49
2208 5401 1.006314 GACAGACGAGCAGCTGACAC 61.006 60.000 20.43 6.70 36.07 3.67
2209 5402 1.175347 AGACAGACGAGCAGCTGACA 61.175 55.000 20.43 0.00 36.07 3.58
2210 5403 0.038709 AAGACAGACGAGCAGCTGAC 60.039 55.000 20.43 9.11 36.07 3.51
2211 5404 0.676184 AAAGACAGACGAGCAGCTGA 59.324 50.000 20.43 0.00 36.07 4.26
2212 5405 1.506493 AAAAGACAGACGAGCAGCTG 58.494 50.000 10.11 10.11 38.10 4.24
2213 5406 1.869767 CAAAAAGACAGACGAGCAGCT 59.130 47.619 0.00 0.00 0.00 4.24
2214 5407 1.069636 CCAAAAAGACAGACGAGCAGC 60.070 52.381 0.00 0.00 0.00 5.25
2215 5408 2.032549 CACCAAAAAGACAGACGAGCAG 60.033 50.000 0.00 0.00 0.00 4.24
2216 5409 1.939934 CACCAAAAAGACAGACGAGCA 59.060 47.619 0.00 0.00 0.00 4.26
2217 5410 1.334149 GCACCAAAAAGACAGACGAGC 60.334 52.381 0.00 0.00 0.00 5.03
2218 5411 1.070577 CGCACCAAAAAGACAGACGAG 60.071 52.381 0.00 0.00 0.00 4.18
2219 5412 0.934496 CGCACCAAAAAGACAGACGA 59.066 50.000 0.00 0.00 0.00 4.20
2220 5413 0.657368 GCGCACCAAAAAGACAGACG 60.657 55.000 0.30 0.00 0.00 4.18
2221 5414 0.657368 CGCGCACCAAAAAGACAGAC 60.657 55.000 8.75 0.00 0.00 3.51
2222 5415 1.092921 ACGCGCACCAAAAAGACAGA 61.093 50.000 5.73 0.00 0.00 3.41
2223 5416 0.657368 GACGCGCACCAAAAAGACAG 60.657 55.000 5.73 0.00 0.00 3.51
2224 5417 1.092921 AGACGCGCACCAAAAAGACA 61.093 50.000 5.73 0.00 0.00 3.41
2225 5418 0.657368 CAGACGCGCACCAAAAAGAC 60.657 55.000 5.73 0.00 0.00 3.01
2226 5419 1.092921 ACAGACGCGCACCAAAAAGA 61.093 50.000 5.73 0.00 0.00 2.52
2227 5420 0.248458 AACAGACGCGCACCAAAAAG 60.248 50.000 5.73 0.00 0.00 2.27
2228 5421 0.171455 AAACAGACGCGCACCAAAAA 59.829 45.000 5.73 0.00 0.00 1.94
2229 5422 0.171455 AAAACAGACGCGCACCAAAA 59.829 45.000 5.73 0.00 0.00 2.44
2230 5423 1.003331 CTAAAACAGACGCGCACCAAA 60.003 47.619 5.73 0.00 0.00 3.28
2231 5424 0.584396 CTAAAACAGACGCGCACCAA 59.416 50.000 5.73 0.00 0.00 3.67
2232 5425 0.249531 TCTAAAACAGACGCGCACCA 60.250 50.000 5.73 0.00 0.00 4.17
2233 5426 0.863144 TTCTAAAACAGACGCGCACC 59.137 50.000 5.73 0.00 31.12 5.01
2234 5427 2.656192 TTTCTAAAACAGACGCGCAC 57.344 45.000 5.73 0.00 31.12 5.34
2235 5428 2.976729 GTTTTCTAAAACAGACGCGCA 58.023 42.857 5.73 0.00 45.72 6.09
2269 5462 9.961265 CTCTGTATCATTTGCAATTGTATTCAT 57.039 29.630 18.16 8.76 0.00 2.57
2270 5463 9.176460 TCTCTGTATCATTTGCAATTGTATTCA 57.824 29.630 18.16 13.25 0.00 2.57
2271 5464 9.443283 GTCTCTGTATCATTTGCAATTGTATTC 57.557 33.333 18.16 10.40 0.00 1.75
2272 5465 8.959548 TGTCTCTGTATCATTTGCAATTGTATT 58.040 29.630 18.16 9.27 0.00 1.89
2273 5466 8.510243 TGTCTCTGTATCATTTGCAATTGTAT 57.490 30.769 18.16 13.29 0.00 2.29
2274 5467 7.607607 ACTGTCTCTGTATCATTTGCAATTGTA 59.392 33.333 18.16 0.00 0.00 2.41
2275 5468 6.432162 ACTGTCTCTGTATCATTTGCAATTGT 59.568 34.615 18.16 10.13 0.00 2.71
2276 5469 6.849502 ACTGTCTCTGTATCATTTGCAATTG 58.150 36.000 13.87 13.87 0.00 2.32
2277 5470 8.618677 CATACTGTCTCTGTATCATTTGCAATT 58.381 33.333 0.00 0.00 0.00 2.32
2278 5471 7.989170 TCATACTGTCTCTGTATCATTTGCAAT 59.011 33.333 0.00 0.00 0.00 3.56
2279 5472 7.330262 TCATACTGTCTCTGTATCATTTGCAA 58.670 34.615 0.00 0.00 0.00 4.08
2280 5473 6.877236 TCATACTGTCTCTGTATCATTTGCA 58.123 36.000 0.00 0.00 0.00 4.08
2281 5474 7.518052 GCTTCATACTGTCTCTGTATCATTTGC 60.518 40.741 0.00 0.00 0.00 3.68
2282 5475 7.710044 AGCTTCATACTGTCTCTGTATCATTTG 59.290 37.037 0.00 0.00 0.00 2.32
2283 5476 7.710044 CAGCTTCATACTGTCTCTGTATCATTT 59.290 37.037 0.00 0.00 0.00 2.32
2284 5477 7.208777 CAGCTTCATACTGTCTCTGTATCATT 58.791 38.462 0.00 0.00 0.00 2.57
2285 5478 6.239261 CCAGCTTCATACTGTCTCTGTATCAT 60.239 42.308 0.00 0.00 33.09 2.45
2286 5479 5.068329 CCAGCTTCATACTGTCTCTGTATCA 59.932 44.000 0.00 0.00 33.09 2.15
2287 5480 5.300539 TCCAGCTTCATACTGTCTCTGTATC 59.699 44.000 0.00 0.00 33.09 2.24
2288 5481 5.068460 GTCCAGCTTCATACTGTCTCTGTAT 59.932 44.000 0.00 0.00 33.09 2.29
2289 5482 4.399618 GTCCAGCTTCATACTGTCTCTGTA 59.600 45.833 0.00 0.00 33.09 2.74
2290 5483 3.194542 GTCCAGCTTCATACTGTCTCTGT 59.805 47.826 0.00 0.00 33.09 3.41
2291 5484 3.446873 AGTCCAGCTTCATACTGTCTCTG 59.553 47.826 0.00 0.00 33.09 3.35
2292 5485 3.446873 CAGTCCAGCTTCATACTGTCTCT 59.553 47.826 6.41 0.00 35.66 3.10
2293 5486 3.779759 CAGTCCAGCTTCATACTGTCTC 58.220 50.000 6.41 0.00 35.66 3.36
2294 5487 2.093764 GCAGTCCAGCTTCATACTGTCT 60.094 50.000 13.21 0.00 41.11 3.41
2295 5488 2.275318 GCAGTCCAGCTTCATACTGTC 58.725 52.381 13.21 5.41 41.11 3.51
2296 5489 1.404717 CGCAGTCCAGCTTCATACTGT 60.405 52.381 13.21 0.00 41.11 3.55
2297 5490 1.134995 TCGCAGTCCAGCTTCATACTG 60.135 52.381 9.19 9.19 41.78 2.74
2298 5491 1.186200 TCGCAGTCCAGCTTCATACT 58.814 50.000 0.00 0.00 0.00 2.12
2299 5492 1.661112 GTTCGCAGTCCAGCTTCATAC 59.339 52.381 0.00 0.00 0.00 2.39
2300 5493 1.735700 CGTTCGCAGTCCAGCTTCATA 60.736 52.381 0.00 0.00 0.00 2.15
2301 5494 1.016130 CGTTCGCAGTCCAGCTTCAT 61.016 55.000 0.00 0.00 0.00 2.57
2302 5495 1.664649 CGTTCGCAGTCCAGCTTCA 60.665 57.895 0.00 0.00 0.00 3.02
2303 5496 0.388134 TACGTTCGCAGTCCAGCTTC 60.388 55.000 0.00 0.00 0.00 3.86
2304 5497 0.246635 ATACGTTCGCAGTCCAGCTT 59.753 50.000 0.00 0.00 0.00 3.74
2305 5498 1.100510 TATACGTTCGCAGTCCAGCT 58.899 50.000 0.00 0.00 0.00 4.24
2306 5499 2.135664 ATATACGTTCGCAGTCCAGC 57.864 50.000 0.00 0.00 0.00 4.85
2307 5500 4.485024 AGTATATACGTTCGCAGTCCAG 57.515 45.455 7.23 0.00 0.00 3.86
2308 5501 4.603985 CAAGTATATACGTTCGCAGTCCA 58.396 43.478 7.23 0.00 0.00 4.02
2309 5502 3.424529 GCAAGTATATACGTTCGCAGTCC 59.575 47.826 7.23 0.00 0.00 3.85
2310 5503 3.424529 GGCAAGTATATACGTTCGCAGTC 59.575 47.826 7.23 0.00 0.00 3.51
2311 5504 3.181484 TGGCAAGTATATACGTTCGCAGT 60.181 43.478 7.23 0.00 0.00 4.40
2312 5505 3.181774 GTGGCAAGTATATACGTTCGCAG 59.818 47.826 7.23 0.00 0.00 5.18
2313 5506 3.117794 GTGGCAAGTATATACGTTCGCA 58.882 45.455 7.23 0.00 0.00 5.10
2314 5507 3.181774 CAGTGGCAAGTATATACGTTCGC 59.818 47.826 7.23 8.37 0.00 4.70
2315 5508 3.181774 GCAGTGGCAAGTATATACGTTCG 59.818 47.826 7.23 0.00 40.72 3.95
2316 5509 3.493503 GGCAGTGGCAAGTATATACGTTC 59.506 47.826 12.58 0.00 43.71 3.95
2317 5510 3.134081 AGGCAGTGGCAAGTATATACGTT 59.866 43.478 20.04 0.32 43.71 3.99
2318 5511 2.698797 AGGCAGTGGCAAGTATATACGT 59.301 45.455 20.04 1.12 43.71 3.57
2319 5512 3.059884 CAGGCAGTGGCAAGTATATACG 58.940 50.000 20.04 0.00 43.71 3.06
2320 5513 3.403038 CCAGGCAGTGGCAAGTATATAC 58.597 50.000 20.04 4.60 40.39 1.47
2321 5514 2.371841 CCCAGGCAGTGGCAAGTATATA 59.628 50.000 20.04 0.00 46.45 0.86
2322 5515 1.143684 CCCAGGCAGTGGCAAGTATAT 59.856 52.381 20.04 0.00 46.45 0.86
2323 5516 0.546122 CCCAGGCAGTGGCAAGTATA 59.454 55.000 20.04 0.00 46.45 1.47
2324 5517 1.304282 CCCAGGCAGTGGCAAGTAT 59.696 57.895 20.04 0.00 46.45 2.12
2325 5518 2.124507 GACCCAGGCAGTGGCAAGTA 62.125 60.000 20.04 0.00 46.45 2.24
2326 5519 3.497884 GACCCAGGCAGTGGCAAGT 62.498 63.158 20.04 12.42 46.45 3.16
2327 5520 2.674380 GACCCAGGCAGTGGCAAG 60.674 66.667 20.04 10.66 46.45 4.01
2328 5521 2.296945 AAAGACCCAGGCAGTGGCAA 62.297 55.000 20.04 0.00 46.45 4.52
2329 5522 2.766925 AAAGACCCAGGCAGTGGCA 61.767 57.895 20.04 0.00 46.45 4.92
2330 5523 2.116125 AAAGACCCAGGCAGTGGC 59.884 61.111 9.02 9.02 46.45 5.01
2332 5525 1.691196 TTTCAAAGACCCAGGCAGTG 58.309 50.000 0.00 0.00 0.00 3.66
2333 5526 2.683211 ATTTCAAAGACCCAGGCAGT 57.317 45.000 0.00 0.00 0.00 4.40
2334 5527 3.160269 AGAATTTCAAAGACCCAGGCAG 58.840 45.455 0.00 0.00 0.00 4.85
2335 5528 3.243359 AGAATTTCAAAGACCCAGGCA 57.757 42.857 0.00 0.00 0.00 4.75
2336 5529 4.607293 AAAGAATTTCAAAGACCCAGGC 57.393 40.909 0.00 0.00 27.08 4.85
2363 5556 9.892130 ACGTCCAGATTTTCTTCTATCTAAAAT 57.108 29.630 0.00 0.00 35.95 1.82
2364 5557 9.720769 AACGTCCAGATTTTCTTCTATCTAAAA 57.279 29.630 0.00 0.00 30.20 1.52
2365 5558 9.151471 CAACGTCCAGATTTTCTTCTATCTAAA 57.849 33.333 0.00 0.00 30.20 1.85
2366 5559 7.764443 CCAACGTCCAGATTTTCTTCTATCTAA 59.236 37.037 0.00 0.00 30.20 2.10
2367 5560 7.123697 TCCAACGTCCAGATTTTCTTCTATCTA 59.876 37.037 0.00 0.00 30.20 1.98
2368 5561 6.070767 TCCAACGTCCAGATTTTCTTCTATCT 60.071 38.462 0.00 0.00 0.00 1.98
2369 5562 6.106673 TCCAACGTCCAGATTTTCTTCTATC 58.893 40.000 0.00 0.00 0.00 2.08
2370 5563 6.049955 TCCAACGTCCAGATTTTCTTCTAT 57.950 37.500 0.00 0.00 0.00 1.98
2371 5564 5.477607 TCCAACGTCCAGATTTTCTTCTA 57.522 39.130 0.00 0.00 0.00 2.10
2372 5565 4.351874 TCCAACGTCCAGATTTTCTTCT 57.648 40.909 0.00 0.00 0.00 2.85
2373 5566 5.432885 TTTCCAACGTCCAGATTTTCTTC 57.567 39.130 0.00 0.00 0.00 2.87
2374 5567 5.845391 TTTTCCAACGTCCAGATTTTCTT 57.155 34.783 0.00 0.00 0.00 2.52
2375 5568 7.519032 TTATTTTCCAACGTCCAGATTTTCT 57.481 32.000 0.00 0.00 0.00 2.52
2376 5569 8.582433 TTTTATTTTCCAACGTCCAGATTTTC 57.418 30.769 0.00 0.00 0.00 2.29
2377 5570 8.950208 TTTTTATTTTCCAACGTCCAGATTTT 57.050 26.923 0.00 0.00 0.00 1.82
2379 5572 9.855021 CTATTTTTATTTTCCAACGTCCAGATT 57.145 29.630 0.00 0.00 0.00 2.40
2380 5573 8.466798 CCTATTTTTATTTTCCAACGTCCAGAT 58.533 33.333 0.00 0.00 0.00 2.90
2381 5574 7.576098 GCCTATTTTTATTTTCCAACGTCCAGA 60.576 37.037 0.00 0.00 0.00 3.86
2382 5575 6.530181 GCCTATTTTTATTTTCCAACGTCCAG 59.470 38.462 0.00 0.00 0.00 3.86
2383 5576 6.015350 TGCCTATTTTTATTTTCCAACGTCCA 60.015 34.615 0.00 0.00 0.00 4.02
2384 5577 6.391537 TGCCTATTTTTATTTTCCAACGTCC 58.608 36.000 0.00 0.00 0.00 4.79
2385 5578 7.044314 CGATGCCTATTTTTATTTTCCAACGTC 60.044 37.037 0.00 0.00 0.00 4.34
2386 5579 6.750039 CGATGCCTATTTTTATTTTCCAACGT 59.250 34.615 0.00 0.00 0.00 3.99
2387 5580 6.970043 TCGATGCCTATTTTTATTTTCCAACG 59.030 34.615 0.00 0.00 0.00 4.10
2388 5581 7.222031 GGTCGATGCCTATTTTTATTTTCCAAC 59.778 37.037 0.00 0.00 0.00 3.77
2389 5582 7.262048 GGTCGATGCCTATTTTTATTTTCCAA 58.738 34.615 0.00 0.00 0.00 3.53
2390 5583 6.459024 CGGTCGATGCCTATTTTTATTTTCCA 60.459 38.462 0.00 0.00 0.00 3.53
2391 5584 5.912955 CGGTCGATGCCTATTTTTATTTTCC 59.087 40.000 0.00 0.00 0.00 3.13
2392 5585 5.398416 GCGGTCGATGCCTATTTTTATTTTC 59.602 40.000 1.45 0.00 0.00 2.29
2393 5586 5.278604 GCGGTCGATGCCTATTTTTATTTT 58.721 37.500 1.45 0.00 0.00 1.82
2394 5587 4.553938 CGCGGTCGATGCCTATTTTTATTT 60.554 41.667 0.00 0.00 38.10 1.40
2395 5588 3.059188 CGCGGTCGATGCCTATTTTTATT 60.059 43.478 0.00 0.00 38.10 1.40
2396 5589 2.478894 CGCGGTCGATGCCTATTTTTAT 59.521 45.455 0.00 0.00 38.10 1.40
2397 5590 1.862201 CGCGGTCGATGCCTATTTTTA 59.138 47.619 0.00 0.00 38.10 1.52
2398 5591 0.655733 CGCGGTCGATGCCTATTTTT 59.344 50.000 0.00 0.00 38.10 1.94
2399 5592 1.772063 GCGCGGTCGATGCCTATTTT 61.772 55.000 8.83 0.00 38.10 1.82
2400 5593 2.244651 GCGCGGTCGATGCCTATTT 61.245 57.895 8.83 0.00 38.10 1.40
2401 5594 2.661866 GCGCGGTCGATGCCTATT 60.662 61.111 8.83 0.00 38.10 1.73
2402 5595 4.664677 GGCGCGGTCGATGCCTAT 62.665 66.667 8.83 0.00 45.40 2.57
2432 5625 4.373116 ATGCGTCCGTCGTTGCCT 62.373 61.111 0.00 0.00 42.13 4.75
2433 5626 4.147322 CATGCGTCCGTCGTTGCC 62.147 66.667 0.00 0.00 42.13 4.52
2434 5627 4.147322 CCATGCGTCCGTCGTTGC 62.147 66.667 0.00 0.00 42.13 4.17
2435 5628 4.147322 GCCATGCGTCCGTCGTTG 62.147 66.667 0.00 0.00 42.13 4.10
2436 5629 2.495366 TTAGCCATGCGTCCGTCGTT 62.495 55.000 0.00 0.00 42.13 3.85
2437 5630 2.495366 TTTAGCCATGCGTCCGTCGT 62.495 55.000 0.00 0.00 42.13 4.34
2438 5631 1.807981 TTTAGCCATGCGTCCGTCG 60.808 57.895 0.00 0.00 43.12 5.12
2439 5632 0.739813 AGTTTAGCCATGCGTCCGTC 60.740 55.000 0.00 0.00 0.00 4.79
2440 5633 1.019278 CAGTTTAGCCATGCGTCCGT 61.019 55.000 0.00 0.00 0.00 4.69
2441 5634 0.739462 TCAGTTTAGCCATGCGTCCG 60.739 55.000 0.00 0.00 0.00 4.79
2442 5635 1.668419 ATCAGTTTAGCCATGCGTCC 58.332 50.000 0.00 0.00 0.00 4.79
2443 5636 2.221981 GCTATCAGTTTAGCCATGCGTC 59.778 50.000 0.00 0.00 38.93 5.19
2444 5637 2.158900 AGCTATCAGTTTAGCCATGCGT 60.159 45.455 0.08 0.00 44.64 5.24
2445 5638 2.222678 CAGCTATCAGTTTAGCCATGCG 59.777 50.000 0.00 0.00 44.64 4.73
2446 5639 2.031333 GCAGCTATCAGTTTAGCCATGC 60.031 50.000 0.00 1.77 44.64 4.06
2447 5640 2.551459 GGCAGCTATCAGTTTAGCCATG 59.449 50.000 0.00 0.00 44.64 3.66
2448 5641 2.487986 GGGCAGCTATCAGTTTAGCCAT 60.488 50.000 8.05 0.00 44.64 4.40
2449 5642 1.134098 GGGCAGCTATCAGTTTAGCCA 60.134 52.381 8.05 0.00 44.64 4.75
2450 5643 1.141858 AGGGCAGCTATCAGTTTAGCC 59.858 52.381 0.00 0.00 44.64 3.93
2451 5644 2.216898 CAGGGCAGCTATCAGTTTAGC 58.783 52.381 0.00 0.00 44.03 3.09
2452 5645 2.216898 GCAGGGCAGCTATCAGTTTAG 58.783 52.381 0.00 0.00 0.00 1.85
2453 5646 1.559219 TGCAGGGCAGCTATCAGTTTA 59.441 47.619 2.89 0.00 33.32 2.01
2454 5647 0.329261 TGCAGGGCAGCTATCAGTTT 59.671 50.000 2.89 0.00 33.32 2.66
2455 5648 1.993653 TGCAGGGCAGCTATCAGTT 59.006 52.632 2.89 0.00 33.32 3.16
2456 5649 3.731547 TGCAGGGCAGCTATCAGT 58.268 55.556 2.89 0.00 33.32 3.41
2466 5659 4.052518 ACCATGGACCTGCAGGGC 62.053 66.667 35.42 33.91 44.61 5.19
2467 5660 2.141011 TTGACCATGGACCTGCAGGG 62.141 60.000 35.42 19.26 40.27 4.45
2468 5661 0.962356 GTTGACCATGGACCTGCAGG 60.962 60.000 31.60 31.60 42.17 4.85
2469 5662 0.250858 TGTTGACCATGGACCTGCAG 60.251 55.000 21.47 6.78 0.00 4.41
2470 5663 0.537143 GTGTTGACCATGGACCTGCA 60.537 55.000 21.47 8.47 0.00 4.41
2471 5664 0.250901 AGTGTTGACCATGGACCTGC 60.251 55.000 21.47 5.81 0.00 4.85
2472 5665 2.276732 AAGTGTTGACCATGGACCTG 57.723 50.000 21.47 0.00 0.00 4.00
2473 5666 2.443255 AGAAAGTGTTGACCATGGACCT 59.557 45.455 21.47 1.42 0.00 3.85
2474 5667 2.814336 GAGAAAGTGTTGACCATGGACC 59.186 50.000 21.47 10.39 0.00 4.46
2475 5668 2.814336 GGAGAAAGTGTTGACCATGGAC 59.186 50.000 21.47 13.94 0.00 4.02
2476 5669 2.549992 CGGAGAAAGTGTTGACCATGGA 60.550 50.000 21.47 0.00 0.00 3.41
2477 5670 1.806542 CGGAGAAAGTGTTGACCATGG 59.193 52.381 11.19 11.19 0.00 3.66
2478 5671 1.806542 CCGGAGAAAGTGTTGACCATG 59.193 52.381 0.00 0.00 0.00 3.66
2479 5672 1.420138 ACCGGAGAAAGTGTTGACCAT 59.580 47.619 9.46 0.00 0.00 3.55
2480 5673 0.834612 ACCGGAGAAAGTGTTGACCA 59.165 50.000 9.46 0.00 0.00 4.02
2481 5674 1.509703 GACCGGAGAAAGTGTTGACC 58.490 55.000 9.46 0.00 0.00 4.02
2482 5675 1.202604 TGGACCGGAGAAAGTGTTGAC 60.203 52.381 9.46 0.00 0.00 3.18
2483 5676 1.070134 CTGGACCGGAGAAAGTGTTGA 59.930 52.381 9.46 0.00 0.00 3.18
2484 5677 1.512926 CTGGACCGGAGAAAGTGTTG 58.487 55.000 9.46 0.00 0.00 3.33
2485 5678 0.250338 GCTGGACCGGAGAAAGTGTT 60.250 55.000 9.46 0.00 0.00 3.32
2486 5679 1.122019 AGCTGGACCGGAGAAAGTGT 61.122 55.000 9.46 0.00 0.00 3.55
2487 5680 0.035458 AAGCTGGACCGGAGAAAGTG 59.965 55.000 9.46 0.00 0.00 3.16
2488 5681 0.765510 AAAGCTGGACCGGAGAAAGT 59.234 50.000 9.46 0.00 0.00 2.66
2489 5682 1.160137 CAAAGCTGGACCGGAGAAAG 58.840 55.000 9.46 0.54 0.00 2.62
2490 5683 0.889186 GCAAAGCTGGACCGGAGAAA 60.889 55.000 9.46 0.00 0.00 2.52
2491 5684 1.302511 GCAAAGCTGGACCGGAGAA 60.303 57.895 9.46 0.00 0.00 2.87
2492 5685 2.347490 GCAAAGCTGGACCGGAGA 59.653 61.111 9.46 0.00 0.00 3.71
2493 5686 2.747855 GGCAAAGCTGGACCGGAG 60.748 66.667 9.46 0.00 0.00 4.63
2494 5687 3.249189 AGGCAAAGCTGGACCGGA 61.249 61.111 9.46 0.00 0.00 5.14
2495 5688 2.747855 GAGGCAAAGCTGGACCGG 60.748 66.667 0.00 0.00 0.00 5.28
2496 5689 1.743252 GAGAGGCAAAGCTGGACCG 60.743 63.158 0.00 0.00 0.00 4.79
2497 5690 0.957888 GTGAGAGGCAAAGCTGGACC 60.958 60.000 0.00 0.00 0.00 4.46
2498 5691 0.250467 TGTGAGAGGCAAAGCTGGAC 60.250 55.000 0.00 0.00 0.00 4.02
2499 5692 0.473755 TTGTGAGAGGCAAAGCTGGA 59.526 50.000 0.00 0.00 0.00 3.86
2500 5693 1.471684 GATTGTGAGAGGCAAAGCTGG 59.528 52.381 0.00 0.00 0.00 4.85
2501 5694 1.471684 GGATTGTGAGAGGCAAAGCTG 59.528 52.381 0.00 0.00 0.00 4.24
2502 5695 1.353694 AGGATTGTGAGAGGCAAAGCT 59.646 47.619 0.00 0.00 0.00 3.74
2503 5696 1.471684 CAGGATTGTGAGAGGCAAAGC 59.528 52.381 0.00 0.00 0.00 3.51
2504 5697 2.089980 CCAGGATTGTGAGAGGCAAAG 58.910 52.381 0.00 0.00 0.00 2.77
2505 5698 1.887956 GCCAGGATTGTGAGAGGCAAA 60.888 52.381 0.00 0.00 41.63 3.68
2506 5699 0.322816 GCCAGGATTGTGAGAGGCAA 60.323 55.000 0.00 0.00 41.63 4.52
2507 5700 1.300963 GCCAGGATTGTGAGAGGCA 59.699 57.895 0.00 0.00 41.63 4.75
2508 5701 0.106819 ATGCCAGGATTGTGAGAGGC 60.107 55.000 0.00 0.00 42.32 4.70
2509 5702 1.809271 CGATGCCAGGATTGTGAGAGG 60.809 57.143 0.00 0.00 0.00 3.69
2510 5703 1.579698 CGATGCCAGGATTGTGAGAG 58.420 55.000 0.00 0.00 0.00 3.20
2511 5704 0.462581 GCGATGCCAGGATTGTGAGA 60.463 55.000 0.00 0.00 0.00 3.27
2512 5705 0.745486 TGCGATGCCAGGATTGTGAG 60.745 55.000 0.00 0.00 0.00 3.51
2513 5706 0.322366 TTGCGATGCCAGGATTGTGA 60.322 50.000 0.00 0.00 0.00 3.58
2514 5707 0.742505 ATTGCGATGCCAGGATTGTG 59.257 50.000 0.00 0.00 0.00 3.33
2515 5708 1.027357 GATTGCGATGCCAGGATTGT 58.973 50.000 0.00 0.00 0.00 2.71
2516 5709 1.266175 GAGATTGCGATGCCAGGATTG 59.734 52.381 0.00 0.00 0.00 2.67
2517 5710 1.602311 GAGATTGCGATGCCAGGATT 58.398 50.000 0.00 0.00 0.00 3.01
2518 5711 0.602106 CGAGATTGCGATGCCAGGAT 60.602 55.000 0.00 0.00 0.00 3.24
2519 5712 1.227350 CGAGATTGCGATGCCAGGA 60.227 57.895 0.00 0.00 0.00 3.86
2520 5713 0.811219 TTCGAGATTGCGATGCCAGG 60.811 55.000 0.00 0.00 40.35 4.45
2521 5714 1.070108 CATTCGAGATTGCGATGCCAG 60.070 52.381 0.00 0.00 40.35 4.85
2522 5715 0.939419 CATTCGAGATTGCGATGCCA 59.061 50.000 0.00 0.00 40.35 4.92
2523 5716 0.385223 GCATTCGAGATTGCGATGCC 60.385 55.000 4.94 0.00 40.35 4.40
2524 5717 0.305617 TGCATTCGAGATTGCGATGC 59.694 50.000 8.66 8.66 41.11 3.91
2525 5718 2.222445 TGATGCATTCGAGATTGCGATG 59.778 45.455 0.00 0.60 40.35 3.84
2526 5719 2.486918 TGATGCATTCGAGATTGCGAT 58.513 42.857 0.00 8.94 40.35 4.58
2527 5720 1.938625 TGATGCATTCGAGATTGCGA 58.061 45.000 0.00 0.00 39.71 5.10
2528 5721 2.742954 TTGATGCATTCGAGATTGCG 57.257 45.000 0.00 0.00 39.71 4.85
2529 5722 3.973135 GTGATTGATGCATTCGAGATTGC 59.027 43.478 0.00 11.66 37.97 3.56
2530 5723 5.419760 AGTGATTGATGCATTCGAGATTG 57.580 39.130 0.00 0.00 0.00 2.67
2531 5724 6.446781 AAAGTGATTGATGCATTCGAGATT 57.553 33.333 0.00 0.00 0.00 2.40
2532 5725 6.446781 AAAAGTGATTGATGCATTCGAGAT 57.553 33.333 0.00 0.00 0.00 2.75
2533 5726 5.885230 AAAAGTGATTGATGCATTCGAGA 57.115 34.783 0.00 0.00 0.00 4.04
2534 5727 6.088173 TGAAAAAGTGATTGATGCATTCGAG 58.912 36.000 0.00 0.00 0.00 4.04
2535 5728 6.011476 TGAAAAAGTGATTGATGCATTCGA 57.989 33.333 0.00 0.00 0.00 3.71
2536 5729 5.220154 GCTGAAAAAGTGATTGATGCATTCG 60.220 40.000 0.00 0.00 0.00 3.34
2537 5730 5.063060 GGCTGAAAAAGTGATTGATGCATTC 59.937 40.000 0.00 0.00 0.00 2.67
2538 5731 4.933400 GGCTGAAAAAGTGATTGATGCATT 59.067 37.500 0.00 0.00 0.00 3.56
2539 5732 4.222145 AGGCTGAAAAAGTGATTGATGCAT 59.778 37.500 0.00 0.00 0.00 3.96
2540 5733 3.575256 AGGCTGAAAAAGTGATTGATGCA 59.425 39.130 0.00 0.00 0.00 3.96
2541 5734 3.924686 CAGGCTGAAAAAGTGATTGATGC 59.075 43.478 9.42 0.00 0.00 3.91
2542 5735 3.924686 GCAGGCTGAAAAAGTGATTGATG 59.075 43.478 20.86 0.00 0.00 3.07
2543 5736 3.366679 CGCAGGCTGAAAAAGTGATTGAT 60.367 43.478 20.86 0.00 0.00 2.57
2544 5737 2.030893 CGCAGGCTGAAAAAGTGATTGA 60.031 45.455 20.86 0.00 0.00 2.57
2545 5738 2.030893 TCGCAGGCTGAAAAAGTGATTG 60.031 45.455 20.86 0.00 0.00 2.67
2546 5739 2.229792 TCGCAGGCTGAAAAAGTGATT 58.770 42.857 20.86 0.00 0.00 2.57
2547 5740 1.896220 TCGCAGGCTGAAAAAGTGAT 58.104 45.000 20.86 0.00 0.00 3.06
2548 5741 1.333619 GTTCGCAGGCTGAAAAAGTGA 59.666 47.619 20.86 0.00 0.00 3.41
2549 5742 1.600413 GGTTCGCAGGCTGAAAAAGTG 60.600 52.381 20.86 0.00 0.00 3.16
2550 5743 0.668535 GGTTCGCAGGCTGAAAAAGT 59.331 50.000 20.86 0.00 0.00 2.66
2551 5744 3.479255 GGTTCGCAGGCTGAAAAAG 57.521 52.632 20.86 3.39 0.00 2.27


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.