Multiple sequence alignment - TraesCS7B01G367100

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS7B01G367100 chr7B 100.000 2642 0 0 1 2642 630663818 630661177 0.000000e+00 4879.0
1 TraesCS7B01G367100 chr7B 82.480 1016 101 30 896 1855 632331046 632332040 0.000000e+00 819.0
2 TraesCS7B01G367100 chr7B 91.168 351 17 6 1 337 15824057 15824407 5.150000e-127 464.0
3 TraesCS7B01G367100 chr7B 91.329 346 16 6 1 332 653176830 653176485 6.660000e-126 460.0
4 TraesCS7B01G367100 chr7B 90.202 347 17 5 1 332 380711048 380710704 1.120000e-118 436.0
5 TraesCS7B01G367100 chr7D 94.980 1474 58 9 497 1964 572851553 572850090 0.000000e+00 2298.0
6 TraesCS7B01G367100 chr7D 83.781 1005 96 20 894 1855 573475015 573475995 0.000000e+00 891.0
7 TraesCS7B01G367100 chr7D 90.894 604 54 1 2039 2641 572849945 572849342 0.000000e+00 809.0
8 TraesCS7B01G367100 chr7D 83.151 914 91 23 995 1855 573617939 573618842 0.000000e+00 776.0
9 TraesCS7B01G367100 chr7D 86.167 347 32 12 3 339 523392049 523391709 6.950000e-96 361.0
10 TraesCS7B01G367100 chr7A 93.205 986 65 2 692 1676 662176934 662175950 0.000000e+00 1448.0
11 TraesCS7B01G367100 chr7A 82.759 1015 97 26 894 1852 663494487 663495479 0.000000e+00 833.0
12 TraesCS7B01G367100 chr7A 93.464 306 14 5 1663 1964 662175426 662175123 1.440000e-122 449.0
13 TraesCS7B01G367100 chr7A 93.909 197 12 0 491 687 662177451 662177255 5.530000e-77 298.0
14 TraesCS7B01G367100 chr3B 91.908 346 14 6 1 332 20170060 20169715 3.080000e-129 472.0
15 TraesCS7B01G367100 chr3B 89.972 359 18 8 1 342 809036763 809037120 5.190000e-122 448.0
16 TraesCS7B01G367100 chr3B 81.046 153 21 5 1085 1236 667779243 667779098 5.980000e-22 115.0
17 TraesCS7B01G367100 chr1B 91.884 345 14 6 2 332 25227455 25227111 1.110000e-128 470.0
18 TraesCS7B01G367100 chr6B 91.643 347 14 7 1 332 21063701 21064047 1.430000e-127 466.0
19 TraesCS7B01G367100 chrUn 90.828 338 17 4 1 324 51423134 51423471 8.680000e-120 440.0
20 TraesCS7B01G367100 chr1A 90.149 335 29 4 1 332 513729437 513729104 1.450000e-117 433.0
21 TraesCS7B01G367100 chr5B 89.645 338 20 4 1 324 493125878 493126214 1.460000e-112 416.0
22 TraesCS7B01G367100 chr6D 88.218 348 25 5 1 332 379702688 379702341 4.100000e-108 401.0
23 TraesCS7B01G367100 chr4D 86.257 342 34 8 3 333 46027078 46027417 2.500000e-95 359.0
24 TraesCS7B01G367100 chr3D 81.250 160 20 7 1085 1243 506061776 506061626 1.280000e-23 121.0
25 TraesCS7B01G367100 chr3D 87.143 70 7 2 1085 1153 506109349 506109281 7.840000e-11 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS7B01G367100 chr7B 630661177 630663818 2641 True 4879.000000 4879 100.000 1 2642 1 chr7B.!!$R2 2641
1 TraesCS7B01G367100 chr7B 632331046 632332040 994 False 819.000000 819 82.480 896 1855 1 chr7B.!!$F2 959
2 TraesCS7B01G367100 chr7D 572849342 572851553 2211 True 1553.500000 2298 92.937 497 2641 2 chr7D.!!$R2 2144
3 TraesCS7B01G367100 chr7D 573475015 573475995 980 False 891.000000 891 83.781 894 1855 1 chr7D.!!$F1 961
4 TraesCS7B01G367100 chr7D 573617939 573618842 903 False 776.000000 776 83.151 995 1855 1 chr7D.!!$F2 860
5 TraesCS7B01G367100 chr7A 663494487 663495479 992 False 833.000000 833 82.759 894 1852 1 chr7A.!!$F1 958
6 TraesCS7B01G367100 chr7A 662175123 662177451 2328 True 731.666667 1448 93.526 491 1964 3 chr7A.!!$R1 1473

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
63 64 0.040157 TTTACGTCCGTGTGTCCTCG 60.040 55.0 1.98 0.0 0.00 4.63 F
614 615 0.239347 GCTTCTGCGTTCATTGCTGT 59.761 50.0 0.00 0.0 33.56 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1365 1691 0.528249 GGCATTGCTTACCATTGGCG 60.528 55.0 8.82 0.0 39.50 5.69 R
2242 3240 0.173255 GGATGGCAAAACATGTCCGG 59.827 55.0 0.00 0.0 30.45 5.14 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.069684 CAGATCTATCTTTGGTGGATTTGC 57.930 41.667 0.00 0.00 34.22 3.68
24 25 5.826737 CAGATCTATCTTTGGTGGATTTGCT 59.173 40.000 0.00 0.00 34.22 3.91
25 26 6.017275 CAGATCTATCTTTGGTGGATTTGCTC 60.017 42.308 0.00 0.00 34.22 4.26
26 27 4.191544 TCTATCTTTGGTGGATTTGCTCG 58.808 43.478 0.00 0.00 0.00 5.03
27 28 1.533625 TCTTTGGTGGATTTGCTCGG 58.466 50.000 0.00 0.00 0.00 4.63
28 29 1.073125 TCTTTGGTGGATTTGCTCGGA 59.927 47.619 0.00 0.00 0.00 4.55
29 30 2.094675 CTTTGGTGGATTTGCTCGGAT 58.905 47.619 0.00 0.00 0.00 4.18
30 31 1.750193 TTGGTGGATTTGCTCGGATC 58.250 50.000 0.00 0.00 0.00 3.36
31 32 0.911769 TGGTGGATTTGCTCGGATCT 59.088 50.000 0.00 0.00 0.00 2.75
32 33 1.281867 TGGTGGATTTGCTCGGATCTT 59.718 47.619 0.00 0.00 0.00 2.40
33 34 1.672881 GGTGGATTTGCTCGGATCTTG 59.327 52.381 0.00 0.00 0.00 3.02
34 35 2.359900 GTGGATTTGCTCGGATCTTGT 58.640 47.619 0.00 0.00 0.00 3.16
35 36 2.352960 GTGGATTTGCTCGGATCTTGTC 59.647 50.000 0.00 0.00 0.00 3.18
36 37 1.594862 GGATTTGCTCGGATCTTGTCG 59.405 52.381 0.00 0.00 0.00 4.35
37 38 2.271800 GATTTGCTCGGATCTTGTCGT 58.728 47.619 0.00 0.00 0.00 4.34
38 39 2.163818 TTTGCTCGGATCTTGTCGTT 57.836 45.000 0.00 0.00 0.00 3.85
39 40 1.428448 TTGCTCGGATCTTGTCGTTG 58.572 50.000 0.00 0.00 0.00 4.10
40 41 0.317160 TGCTCGGATCTTGTCGTTGT 59.683 50.000 0.00 0.00 0.00 3.32
41 42 1.270094 TGCTCGGATCTTGTCGTTGTT 60.270 47.619 0.00 0.00 0.00 2.83
42 43 1.390463 GCTCGGATCTTGTCGTTGTTC 59.610 52.381 0.00 0.00 0.00 3.18
43 44 1.649171 CTCGGATCTTGTCGTTGTTCG 59.351 52.381 0.00 0.00 41.41 3.95
44 45 1.001048 TCGGATCTTGTCGTTGTTCGT 60.001 47.619 0.00 0.00 40.80 3.85
45 46 1.790623 CGGATCTTGTCGTTGTTCGTT 59.209 47.619 0.00 0.00 40.80 3.85
46 47 2.220133 CGGATCTTGTCGTTGTTCGTTT 59.780 45.455 0.00 0.00 40.80 3.60
47 48 3.426191 CGGATCTTGTCGTTGTTCGTTTA 59.574 43.478 0.00 0.00 40.80 2.01
48 49 4.662394 CGGATCTTGTCGTTGTTCGTTTAC 60.662 45.833 0.00 0.00 40.80 2.01
49 50 3.821937 TCTTGTCGTTGTTCGTTTACG 57.178 42.857 0.00 0.00 40.80 3.18
50 51 3.178267 TCTTGTCGTTGTTCGTTTACGT 58.822 40.909 1.88 0.00 40.80 3.57
51 52 3.240401 TCTTGTCGTTGTTCGTTTACGTC 59.760 43.478 0.00 0.00 40.80 4.34
52 53 1.851666 TGTCGTTGTTCGTTTACGTCC 59.148 47.619 0.00 0.00 40.80 4.79
53 54 1.119635 TCGTTGTTCGTTTACGTCCG 58.880 50.000 0.00 0.00 40.80 4.79
54 55 0.845768 CGTTGTTCGTTTACGTCCGT 59.154 50.000 0.00 0.00 40.80 4.69
55 56 1.394589 CGTTGTTCGTTTACGTCCGTG 60.395 52.381 1.98 0.00 40.80 4.94
56 57 1.587946 GTTGTTCGTTTACGTCCGTGT 59.412 47.619 1.98 0.00 40.80 4.49
57 58 1.198767 TGTTCGTTTACGTCCGTGTG 58.801 50.000 1.98 0.00 40.80 3.82
58 59 1.199624 GTTCGTTTACGTCCGTGTGT 58.800 50.000 1.98 0.00 40.80 3.72
59 60 1.187921 GTTCGTTTACGTCCGTGTGTC 59.812 52.381 1.98 0.00 40.80 3.67
60 61 0.317770 TCGTTTACGTCCGTGTGTCC 60.318 55.000 1.98 0.00 40.80 4.02
61 62 0.318107 CGTTTACGTCCGTGTGTCCT 60.318 55.000 1.98 0.00 34.11 3.85
62 63 1.412387 GTTTACGTCCGTGTGTCCTC 58.588 55.000 1.98 0.00 0.00 3.71
63 64 0.040157 TTTACGTCCGTGTGTCCTCG 60.040 55.000 1.98 0.00 0.00 4.63
64 65 1.855213 TTACGTCCGTGTGTCCTCGG 61.855 60.000 1.98 0.00 46.50 4.63
65 66 3.667282 CGTCCGTGTGTCCTCGGT 61.667 66.667 3.64 0.00 45.58 4.69
66 67 2.732658 GTCCGTGTGTCCTCGGTT 59.267 61.111 3.64 0.00 45.58 4.44
67 68 1.068585 GTCCGTGTGTCCTCGGTTT 59.931 57.895 3.64 0.00 45.58 3.27
68 69 1.068417 TCCGTGTGTCCTCGGTTTG 59.932 57.895 3.64 0.00 45.58 2.93
69 70 1.959226 CCGTGTGTCCTCGGTTTGG 60.959 63.158 0.00 0.00 41.61 3.28
70 71 1.068417 CGTGTGTCCTCGGTTTGGA 59.932 57.895 0.00 0.00 0.00 3.53
71 72 0.320421 CGTGTGTCCTCGGTTTGGAT 60.320 55.000 0.00 0.00 35.87 3.41
72 73 1.439679 GTGTGTCCTCGGTTTGGATC 58.560 55.000 0.00 0.00 35.87 3.36
73 74 1.002087 GTGTGTCCTCGGTTTGGATCT 59.998 52.381 0.00 0.00 35.87 2.75
74 75 1.697432 TGTGTCCTCGGTTTGGATCTT 59.303 47.619 0.00 0.00 35.87 2.40
75 76 2.289444 TGTGTCCTCGGTTTGGATCTTC 60.289 50.000 0.00 0.00 35.87 2.87
76 77 1.278127 TGTCCTCGGTTTGGATCTTCC 59.722 52.381 0.00 0.00 35.87 3.46
77 78 0.535335 TCCTCGGTTTGGATCTTCCG 59.465 55.000 10.40 10.40 40.17 4.30
80 81 2.596904 TCGGTTTGGATCTTCCGATC 57.403 50.000 13.61 0.00 45.49 3.69
81 82 2.108168 TCGGTTTGGATCTTCCGATCT 58.892 47.619 13.61 0.00 45.49 2.75
82 83 3.293337 TCGGTTTGGATCTTCCGATCTA 58.707 45.455 13.61 0.00 45.49 1.98
83 84 3.067742 TCGGTTTGGATCTTCCGATCTAC 59.932 47.826 13.61 0.34 45.49 2.59
84 85 3.381949 GGTTTGGATCTTCCGATCTACG 58.618 50.000 0.00 0.00 44.42 3.51
93 94 4.564116 CGATCTACGGCGGCGGTT 62.564 66.667 35.05 18.10 38.46 4.44
94 95 2.960129 GATCTACGGCGGCGGTTG 60.960 66.667 35.05 22.79 0.00 3.77
103 104 3.726517 CGGCGGTTGCTGTTCTGG 61.727 66.667 0.00 0.00 42.79 3.86
104 105 3.365265 GGCGGTTGCTGTTCTGGG 61.365 66.667 0.00 0.00 42.25 4.45
105 106 3.365265 GCGGTTGCTGTTCTGGGG 61.365 66.667 0.00 0.00 38.39 4.96
106 107 2.113139 CGGTTGCTGTTCTGGGGT 59.887 61.111 0.00 0.00 0.00 4.95
107 108 2.260869 CGGTTGCTGTTCTGGGGTG 61.261 63.158 0.00 0.00 0.00 4.61
108 109 2.564721 GGTTGCTGTTCTGGGGTGC 61.565 63.158 0.00 0.00 0.00 5.01
109 110 1.529244 GTTGCTGTTCTGGGGTGCT 60.529 57.895 0.00 0.00 0.00 4.40
110 111 1.529010 TTGCTGTTCTGGGGTGCTG 60.529 57.895 0.00 0.00 0.00 4.41
111 112 2.674380 GCTGTTCTGGGGTGCTGG 60.674 66.667 0.00 0.00 0.00 4.85
112 113 2.839098 CTGTTCTGGGGTGCTGGT 59.161 61.111 0.00 0.00 0.00 4.00
113 114 1.302832 CTGTTCTGGGGTGCTGGTC 60.303 63.158 0.00 0.00 0.00 4.02
114 115 2.034221 GTTCTGGGGTGCTGGTCC 59.966 66.667 0.00 0.00 0.00 4.46
115 116 2.121963 TTCTGGGGTGCTGGTCCT 60.122 61.111 0.00 0.00 0.00 3.85
116 117 1.159905 TTCTGGGGTGCTGGTCCTA 59.840 57.895 0.00 0.00 0.00 2.94
117 118 0.253160 TTCTGGGGTGCTGGTCCTAT 60.253 55.000 0.00 0.00 0.00 2.57
118 119 0.982852 TCTGGGGTGCTGGTCCTATG 60.983 60.000 0.00 0.00 0.00 2.23
119 120 1.987807 CTGGGGTGCTGGTCCTATGG 61.988 65.000 0.00 0.00 0.00 2.74
120 121 2.757124 GGGGTGCTGGTCCTATGGG 61.757 68.421 0.00 0.00 0.00 4.00
121 122 2.757124 GGGTGCTGGTCCTATGGGG 61.757 68.421 0.00 0.00 0.00 4.96
122 123 2.193248 GTGCTGGTCCTATGGGGC 59.807 66.667 0.00 0.00 36.26 5.80
130 131 2.932855 GTCCTATGGGGCCTTAGAAC 57.067 55.000 0.84 0.00 34.39 3.01
131 132 1.070289 GTCCTATGGGGCCTTAGAACG 59.930 57.143 0.84 0.00 34.39 3.95
132 133 1.062734 TCCTATGGGGCCTTAGAACGA 60.063 52.381 0.84 0.00 34.39 3.85
133 134 1.070289 CCTATGGGGCCTTAGAACGAC 59.930 57.143 0.84 0.00 0.00 4.34
134 135 0.748450 TATGGGGCCTTAGAACGACG 59.252 55.000 0.84 0.00 0.00 5.12
135 136 0.974010 ATGGGGCCTTAGAACGACGA 60.974 55.000 0.84 0.00 0.00 4.20
136 137 1.153686 GGGGCCTTAGAACGACGAC 60.154 63.158 0.84 0.00 0.00 4.34
137 138 1.602327 GGGGCCTTAGAACGACGACT 61.602 60.000 0.84 3.12 0.00 4.18
138 139 0.245813 GGGCCTTAGAACGACGACTT 59.754 55.000 0.84 0.00 0.00 3.01
139 140 1.626747 GGCCTTAGAACGACGACTTC 58.373 55.000 0.00 0.00 0.00 3.01
140 141 1.626747 GCCTTAGAACGACGACTTCC 58.373 55.000 0.00 0.00 0.00 3.46
141 142 1.735038 GCCTTAGAACGACGACTTCCC 60.735 57.143 0.00 0.00 0.00 3.97
142 143 1.467035 CCTTAGAACGACGACTTCCCG 60.467 57.143 0.00 0.00 0.00 5.14
143 144 1.466167 CTTAGAACGACGACTTCCCGA 59.534 52.381 0.00 0.00 0.00 5.14
144 145 0.798776 TAGAACGACGACTTCCCGAC 59.201 55.000 0.00 0.00 0.00 4.79
145 146 0.888285 AGAACGACGACTTCCCGACT 60.888 55.000 0.00 0.00 0.00 4.18
146 147 0.728466 GAACGACGACTTCCCGACTG 60.728 60.000 0.00 0.00 0.00 3.51
147 148 1.450531 AACGACGACTTCCCGACTGT 61.451 55.000 0.00 0.00 0.00 3.55
148 149 1.154263 CGACGACTTCCCGACTGTC 60.154 63.158 0.00 0.00 0.00 3.51
149 150 1.575576 CGACGACTTCCCGACTGTCT 61.576 60.000 6.21 0.00 0.00 3.41
150 151 1.446907 GACGACTTCCCGACTGTCTA 58.553 55.000 6.21 0.00 0.00 2.59
151 152 1.130186 GACGACTTCCCGACTGTCTAC 59.870 57.143 6.21 0.00 0.00 2.59
152 153 1.271271 ACGACTTCCCGACTGTCTACT 60.271 52.381 6.21 0.00 0.00 2.57
153 154 2.027745 ACGACTTCCCGACTGTCTACTA 60.028 50.000 6.21 0.00 0.00 1.82
154 155 2.351111 CGACTTCCCGACTGTCTACTAC 59.649 54.545 6.21 0.00 0.00 2.73
155 156 3.341823 GACTTCCCGACTGTCTACTACA 58.658 50.000 6.21 0.00 36.42 2.74
156 157 3.755378 GACTTCCCGACTGTCTACTACAA 59.245 47.826 6.21 0.00 37.74 2.41
157 158 3.505293 ACTTCCCGACTGTCTACTACAAC 59.495 47.826 6.21 0.00 37.74 3.32
158 159 3.144657 TCCCGACTGTCTACTACAACA 57.855 47.619 6.21 0.00 37.74 3.33
159 160 3.489355 TCCCGACTGTCTACTACAACAA 58.511 45.455 6.21 0.00 37.74 2.83
160 161 3.504906 TCCCGACTGTCTACTACAACAAG 59.495 47.826 6.21 0.00 37.74 3.16
161 162 3.255149 CCCGACTGTCTACTACAACAAGT 59.745 47.826 6.21 0.00 37.74 3.16
162 163 4.261909 CCCGACTGTCTACTACAACAAGTT 60.262 45.833 6.21 0.00 37.74 2.66
163 164 4.680110 CCGACTGTCTACTACAACAAGTTG 59.320 45.833 11.16 11.16 45.58 3.16
171 172 2.027460 CAACAAGTTGTGCCCGGC 59.973 61.111 9.79 1.04 35.92 6.13
172 173 2.123897 AACAAGTTGTGCCCGGCT 60.124 55.556 9.79 0.00 0.00 5.52
173 174 2.193536 AACAAGTTGTGCCCGGCTC 61.194 57.895 9.79 7.85 0.00 4.70
174 175 3.365265 CAAGTTGTGCCCGGCTCC 61.365 66.667 11.61 1.66 0.00 4.70
192 193 4.996434 GGCGATGGAGGGGCGATG 62.996 72.222 0.00 0.00 0.00 3.84
193 194 3.928779 GCGATGGAGGGGCGATGA 61.929 66.667 0.00 0.00 0.00 2.92
194 195 2.029666 CGATGGAGGGGCGATGAC 59.970 66.667 0.00 0.00 0.00 3.06
195 196 2.029666 GATGGAGGGGCGATGACG 59.970 66.667 0.00 0.00 42.93 4.35
196 197 3.521529 GATGGAGGGGCGATGACGG 62.522 68.421 0.00 0.00 40.15 4.79
220 221 3.804193 GCCTTCGGCTCGCTTTGG 61.804 66.667 0.00 0.00 46.69 3.28
221 222 2.047274 CCTTCGGCTCGCTTTGGA 60.047 61.111 0.00 0.00 0.00 3.53
222 223 2.103042 CCTTCGGCTCGCTTTGGAG 61.103 63.158 0.00 0.00 37.11 3.86
230 231 2.086054 CTCGCTTTGGAGCTTGTAGT 57.914 50.000 0.00 0.00 46.96 2.73
231 232 1.996191 CTCGCTTTGGAGCTTGTAGTC 59.004 52.381 0.00 0.00 46.96 2.59
232 233 0.716108 CGCTTTGGAGCTTGTAGTCG 59.284 55.000 0.00 0.00 46.96 4.18
233 234 1.797025 GCTTTGGAGCTTGTAGTCGT 58.203 50.000 0.00 0.00 45.65 4.34
234 235 1.727335 GCTTTGGAGCTTGTAGTCGTC 59.273 52.381 0.00 0.00 45.65 4.20
235 236 1.986378 CTTTGGAGCTTGTAGTCGTCG 59.014 52.381 0.00 0.00 0.00 5.12
236 237 0.388134 TTGGAGCTTGTAGTCGTCGC 60.388 55.000 0.00 0.00 0.00 5.19
237 238 1.241990 TGGAGCTTGTAGTCGTCGCT 61.242 55.000 0.00 0.00 0.00 4.93
238 239 0.731417 GGAGCTTGTAGTCGTCGCTA 59.269 55.000 0.00 0.00 0.00 4.26
239 240 1.268133 GGAGCTTGTAGTCGTCGCTAG 60.268 57.143 0.00 0.00 0.00 3.42
240 241 0.733729 AGCTTGTAGTCGTCGCTAGG 59.266 55.000 0.00 0.00 0.00 3.02
241 242 0.450983 GCTTGTAGTCGTCGCTAGGT 59.549 55.000 0.00 0.00 0.00 3.08
242 243 1.794437 GCTTGTAGTCGTCGCTAGGTG 60.794 57.143 0.00 0.00 0.00 4.00
243 244 0.806868 TTGTAGTCGTCGCTAGGTGG 59.193 55.000 0.00 0.00 0.00 4.61
244 245 0.321919 TGTAGTCGTCGCTAGGTGGT 60.322 55.000 0.00 0.00 0.00 4.16
245 246 0.376502 GTAGTCGTCGCTAGGTGGTC 59.623 60.000 0.00 0.00 0.00 4.02
246 247 0.251354 TAGTCGTCGCTAGGTGGTCT 59.749 55.000 0.00 0.00 0.00 3.85
247 248 0.251354 AGTCGTCGCTAGGTGGTCTA 59.749 55.000 0.00 0.00 0.00 2.59
248 249 0.376502 GTCGTCGCTAGGTGGTCTAC 59.623 60.000 0.00 0.00 0.00 2.59
249 250 1.086067 TCGTCGCTAGGTGGTCTACG 61.086 60.000 0.00 0.00 0.00 3.51
250 251 1.086067 CGTCGCTAGGTGGTCTACGA 61.086 60.000 0.00 0.00 32.96 3.43
251 252 1.089920 GTCGCTAGGTGGTCTACGAA 58.910 55.000 0.00 0.00 35.22 3.85
252 253 1.674962 GTCGCTAGGTGGTCTACGAAT 59.325 52.381 0.00 0.00 35.22 3.34
253 254 2.098770 GTCGCTAGGTGGTCTACGAATT 59.901 50.000 0.00 0.00 35.22 2.17
254 255 2.756760 TCGCTAGGTGGTCTACGAATTT 59.243 45.455 0.00 0.00 32.69 1.82
255 256 2.858344 CGCTAGGTGGTCTACGAATTTG 59.142 50.000 0.00 0.00 0.00 2.32
256 257 3.195661 GCTAGGTGGTCTACGAATTTGG 58.804 50.000 0.00 0.00 0.00 3.28
257 258 3.118884 GCTAGGTGGTCTACGAATTTGGA 60.119 47.826 0.00 0.00 0.00 3.53
258 259 4.443034 GCTAGGTGGTCTACGAATTTGGAT 60.443 45.833 0.00 0.00 0.00 3.41
259 260 3.873910 AGGTGGTCTACGAATTTGGATG 58.126 45.455 0.00 0.00 0.00 3.51
260 261 3.263425 AGGTGGTCTACGAATTTGGATGT 59.737 43.478 0.00 0.00 0.00 3.06
261 262 4.468510 AGGTGGTCTACGAATTTGGATGTA 59.531 41.667 0.00 0.00 0.00 2.29
262 263 5.046159 AGGTGGTCTACGAATTTGGATGTAA 60.046 40.000 0.00 0.00 0.00 2.41
263 264 5.820947 GGTGGTCTACGAATTTGGATGTAAT 59.179 40.000 0.00 0.00 0.00 1.89
264 265 6.317893 GGTGGTCTACGAATTTGGATGTAATT 59.682 38.462 0.00 0.00 0.00 1.40
265 266 7.148137 GGTGGTCTACGAATTTGGATGTAATTT 60.148 37.037 0.00 0.00 0.00 1.82
266 267 8.241367 GTGGTCTACGAATTTGGATGTAATTTT 58.759 33.333 0.00 0.00 0.00 1.82
267 268 8.798402 TGGTCTACGAATTTGGATGTAATTTTT 58.202 29.630 0.00 0.00 0.00 1.94
290 291 9.982291 TTTTATTTCTGATATTCGTTGTACTGC 57.018 29.630 0.00 0.00 0.00 4.40
291 292 6.604735 ATTTCTGATATTCGTTGTACTGCC 57.395 37.500 0.00 0.00 0.00 4.85
292 293 4.729227 TCTGATATTCGTTGTACTGCCA 57.271 40.909 0.00 0.00 0.00 4.92
293 294 5.276461 TCTGATATTCGTTGTACTGCCAT 57.724 39.130 0.00 0.00 0.00 4.40
294 295 5.049828 TCTGATATTCGTTGTACTGCCATG 58.950 41.667 0.00 0.00 0.00 3.66
295 296 5.017294 TGATATTCGTTGTACTGCCATGA 57.983 39.130 0.00 0.00 0.00 3.07
296 297 5.610398 TGATATTCGTTGTACTGCCATGAT 58.390 37.500 0.00 0.00 0.00 2.45
297 298 6.054941 TGATATTCGTTGTACTGCCATGATT 58.945 36.000 0.00 0.00 0.00 2.57
298 299 4.621068 ATTCGTTGTACTGCCATGATTG 57.379 40.909 0.00 0.00 0.00 2.67
299 300 3.326836 TCGTTGTACTGCCATGATTGA 57.673 42.857 0.00 0.00 0.00 2.57
300 301 3.669536 TCGTTGTACTGCCATGATTGAA 58.330 40.909 0.00 0.00 0.00 2.69
301 302 3.684305 TCGTTGTACTGCCATGATTGAAG 59.316 43.478 0.00 0.00 0.00 3.02
302 303 3.684305 CGTTGTACTGCCATGATTGAAGA 59.316 43.478 0.00 0.00 0.00 2.87
303 304 4.333649 CGTTGTACTGCCATGATTGAAGAT 59.666 41.667 0.00 0.00 0.00 2.40
304 305 5.575957 GTTGTACTGCCATGATTGAAGATG 58.424 41.667 0.00 0.00 0.00 2.90
305 306 5.101648 TGTACTGCCATGATTGAAGATGA 57.898 39.130 0.00 0.00 0.00 2.92
306 307 5.499313 TGTACTGCCATGATTGAAGATGAA 58.501 37.500 0.00 0.00 0.00 2.57
307 308 6.124340 TGTACTGCCATGATTGAAGATGAAT 58.876 36.000 0.00 0.00 0.00 2.57
308 309 7.281841 TGTACTGCCATGATTGAAGATGAATA 58.718 34.615 0.00 0.00 0.00 1.75
309 310 6.879276 ACTGCCATGATTGAAGATGAATAG 57.121 37.500 0.00 0.00 0.00 1.73
310 311 6.598503 ACTGCCATGATTGAAGATGAATAGA 58.401 36.000 0.00 0.00 0.00 1.98
311 312 7.232188 ACTGCCATGATTGAAGATGAATAGAT 58.768 34.615 0.00 0.00 0.00 1.98
312 313 7.175119 ACTGCCATGATTGAAGATGAATAGATG 59.825 37.037 0.00 0.00 0.00 2.90
313 314 7.228590 TGCCATGATTGAAGATGAATAGATGA 58.771 34.615 0.00 0.00 0.00 2.92
314 315 7.390718 TGCCATGATTGAAGATGAATAGATGAG 59.609 37.037 0.00 0.00 0.00 2.90
315 316 7.606839 GCCATGATTGAAGATGAATAGATGAGA 59.393 37.037 0.00 0.00 0.00 3.27
316 317 9.503399 CCATGATTGAAGATGAATAGATGAGAA 57.497 33.333 0.00 0.00 0.00 2.87
325 326 9.745018 AAGATGAATAGATGAGAAGTTTTTCCA 57.255 29.630 0.00 0.00 33.64 3.53
326 327 9.745018 AGATGAATAGATGAGAAGTTTTTCCAA 57.255 29.630 0.00 0.00 33.64 3.53
353 354 9.769093 AAAAACTATACAGTTAAGCGCAATTAG 57.231 29.630 11.47 0.00 44.41 1.73
354 355 8.712285 AAACTATACAGTTAAGCGCAATTAGA 57.288 30.769 11.47 0.00 44.41 2.10
355 356 8.712285 AACTATACAGTTAAGCGCAATTAGAA 57.288 30.769 11.47 0.00 43.33 2.10
356 357 8.712285 ACTATACAGTTAAGCGCAATTAGAAA 57.288 30.769 11.47 0.00 0.00 2.52
357 358 9.326413 ACTATACAGTTAAGCGCAATTAGAAAT 57.674 29.630 11.47 0.00 0.00 2.17
360 361 7.145932 ACAGTTAAGCGCAATTAGAAATTCT 57.854 32.000 11.47 0.00 0.00 2.40
361 362 7.244192 ACAGTTAAGCGCAATTAGAAATTCTC 58.756 34.615 11.47 0.00 0.00 2.87
362 363 7.094805 ACAGTTAAGCGCAATTAGAAATTCTCA 60.095 33.333 11.47 0.00 0.00 3.27
363 364 7.750458 CAGTTAAGCGCAATTAGAAATTCTCAA 59.250 33.333 11.47 0.00 0.00 3.02
364 365 8.296713 AGTTAAGCGCAATTAGAAATTCTCAAA 58.703 29.630 11.47 0.00 0.00 2.69
365 366 8.911662 GTTAAGCGCAATTAGAAATTCTCAAAA 58.088 29.630 11.47 0.00 0.00 2.44
366 367 6.934561 AGCGCAATTAGAAATTCTCAAAAC 57.065 33.333 11.47 0.00 0.00 2.43
367 368 5.863935 AGCGCAATTAGAAATTCTCAAAACC 59.136 36.000 11.47 0.00 0.00 3.27
368 369 5.863935 GCGCAATTAGAAATTCTCAAAACCT 59.136 36.000 0.30 0.00 0.00 3.50
369 370 6.366061 GCGCAATTAGAAATTCTCAAAACCTT 59.634 34.615 0.30 0.00 0.00 3.50
370 371 7.410835 GCGCAATTAGAAATTCTCAAAACCTTC 60.411 37.037 0.30 0.00 0.00 3.46
371 372 7.594758 CGCAATTAGAAATTCTCAAAACCTTCA 59.405 33.333 0.00 0.00 0.00 3.02
372 373 9.260002 GCAATTAGAAATTCTCAAAACCTTCAA 57.740 29.630 0.00 0.00 0.00 2.69
387 388 9.848172 CAAAACCTTCAAAGATTTTACAATTCG 57.152 29.630 0.00 0.00 0.00 3.34
388 389 7.637709 AACCTTCAAAGATTTTACAATTCGC 57.362 32.000 0.00 0.00 0.00 4.70
389 390 6.744112 ACCTTCAAAGATTTTACAATTCGCA 58.256 32.000 0.00 0.00 0.00 5.10
390 391 7.378181 ACCTTCAAAGATTTTACAATTCGCAT 58.622 30.769 0.00 0.00 0.00 4.73
391 392 8.519526 ACCTTCAAAGATTTTACAATTCGCATA 58.480 29.630 0.00 0.00 0.00 3.14
392 393 9.013490 CCTTCAAAGATTTTACAATTCGCATAG 57.987 33.333 0.00 0.00 0.00 2.23
393 394 9.773328 CTTCAAAGATTTTACAATTCGCATAGA 57.227 29.630 0.00 0.00 0.00 1.98
400 401 9.559958 GATTTTACAATTCGCATAGATATTGGG 57.440 33.333 0.00 0.00 34.57 4.12
401 402 8.684386 TTTTACAATTCGCATAGATATTGGGA 57.316 30.769 0.00 0.00 34.57 4.37
402 403 8.862325 TTTACAATTCGCATAGATATTGGGAT 57.138 30.769 0.00 0.00 36.16 3.85
403 404 8.862325 TTACAATTCGCATAGATATTGGGATT 57.138 30.769 0.00 0.00 36.16 3.01
404 405 7.383102 ACAATTCGCATAGATATTGGGATTC 57.617 36.000 0.00 0.00 36.16 2.52
405 406 6.942005 ACAATTCGCATAGATATTGGGATTCA 59.058 34.615 0.00 0.00 36.16 2.57
406 407 6.992063 ATTCGCATAGATATTGGGATTCAC 57.008 37.500 0.00 0.00 36.16 3.18
407 408 4.494484 TCGCATAGATATTGGGATTCACG 58.506 43.478 0.00 0.00 31.89 4.35
408 409 4.219725 TCGCATAGATATTGGGATTCACGA 59.780 41.667 0.00 0.00 31.89 4.35
409 410 4.564372 CGCATAGATATTGGGATTCACGAG 59.436 45.833 0.00 0.00 0.00 4.18
410 411 5.622233 CGCATAGATATTGGGATTCACGAGA 60.622 44.000 0.00 0.00 0.00 4.04
411 412 6.166279 GCATAGATATTGGGATTCACGAGAA 58.834 40.000 0.00 0.00 38.31 2.87
412 413 6.312426 GCATAGATATTGGGATTCACGAGAAG 59.688 42.308 1.01 0.00 37.14 2.85
413 414 5.220710 AGATATTGGGATTCACGAGAAGG 57.779 43.478 1.01 0.00 37.14 3.46
414 415 2.044123 ATTGGGATTCACGAGAAGGC 57.956 50.000 1.01 0.00 37.14 4.35
415 416 0.690192 TTGGGATTCACGAGAAGGCA 59.310 50.000 1.01 0.00 37.14 4.75
416 417 0.690192 TGGGATTCACGAGAAGGCAA 59.310 50.000 1.01 0.00 37.14 4.52
417 418 1.073125 TGGGATTCACGAGAAGGCAAA 59.927 47.619 1.01 0.00 37.14 3.68
418 419 1.740025 GGGATTCACGAGAAGGCAAAG 59.260 52.381 1.01 0.00 37.14 2.77
419 420 2.427506 GGATTCACGAGAAGGCAAAGT 58.572 47.619 1.01 0.00 37.14 2.66
420 421 2.160417 GGATTCACGAGAAGGCAAAGTG 59.840 50.000 1.01 0.00 37.14 3.16
421 422 2.613026 TTCACGAGAAGGCAAAGTGA 57.387 45.000 0.00 0.00 39.68 3.41
422 423 2.613026 TCACGAGAAGGCAAAGTGAA 57.387 45.000 0.00 0.00 38.66 3.18
423 424 2.483876 TCACGAGAAGGCAAAGTGAAG 58.516 47.619 0.00 0.00 38.66 3.02
424 425 2.158957 TCACGAGAAGGCAAAGTGAAGT 60.159 45.455 0.00 0.00 38.66 3.01
425 426 3.069016 TCACGAGAAGGCAAAGTGAAGTA 59.931 43.478 0.00 0.00 38.66 2.24
426 427 3.184581 CACGAGAAGGCAAAGTGAAGTAC 59.815 47.826 0.00 0.00 35.03 2.73
427 428 3.069729 ACGAGAAGGCAAAGTGAAGTACT 59.930 43.478 0.00 0.00 42.89 2.73
451 452 9.091220 ACTTTCTTGACATAGTACTACTTTCCT 57.909 33.333 4.31 0.00 0.00 3.36
452 453 9.575783 CTTTCTTGACATAGTACTACTTTCCTC 57.424 37.037 4.31 0.00 0.00 3.71
453 454 7.317842 TCTTGACATAGTACTACTTTCCTCG 57.682 40.000 4.31 0.00 0.00 4.63
454 455 6.318144 TCTTGACATAGTACTACTTTCCTCGG 59.682 42.308 4.31 0.00 0.00 4.63
455 456 5.503927 TGACATAGTACTACTTTCCTCGGT 58.496 41.667 4.31 0.00 0.00 4.69
456 457 5.948162 TGACATAGTACTACTTTCCTCGGTT 59.052 40.000 4.31 0.00 0.00 4.44
457 458 6.127814 TGACATAGTACTACTTTCCTCGGTTG 60.128 42.308 4.31 0.00 0.00 3.77
458 459 5.948162 ACATAGTACTACTTTCCTCGGTTGA 59.052 40.000 4.31 0.00 0.00 3.18
459 460 6.435277 ACATAGTACTACTTTCCTCGGTTGAA 59.565 38.462 4.31 0.00 0.00 2.69
460 461 5.796424 AGTACTACTTTCCTCGGTTGAAA 57.204 39.130 0.00 0.00 0.00 2.69
461 462 6.356186 AGTACTACTTTCCTCGGTTGAAAT 57.644 37.500 0.00 0.00 31.75 2.17
462 463 7.472334 AGTACTACTTTCCTCGGTTGAAATA 57.528 36.000 0.00 0.00 31.75 1.40
463 464 7.899973 AGTACTACTTTCCTCGGTTGAAATAA 58.100 34.615 0.00 0.00 31.75 1.40
464 465 8.370182 AGTACTACTTTCCTCGGTTGAAATAAA 58.630 33.333 0.00 0.00 31.75 1.40
465 466 9.159364 GTACTACTTTCCTCGGTTGAAATAAAT 57.841 33.333 0.00 0.00 31.75 1.40
466 467 8.631480 ACTACTTTCCTCGGTTGAAATAAATT 57.369 30.769 0.00 0.00 31.75 1.82
467 468 8.512138 ACTACTTTCCTCGGTTGAAATAAATTG 58.488 33.333 0.00 0.00 31.75 2.32
468 469 7.519032 ACTTTCCTCGGTTGAAATAAATTGA 57.481 32.000 0.00 0.00 31.75 2.57
469 470 7.947282 ACTTTCCTCGGTTGAAATAAATTGAA 58.053 30.769 0.00 0.00 31.75 2.69
470 471 7.865889 ACTTTCCTCGGTTGAAATAAATTGAAC 59.134 33.333 0.00 0.00 31.75 3.18
471 472 7.519032 TTCCTCGGTTGAAATAAATTGAACT 57.481 32.000 0.00 0.00 0.00 3.01
472 473 6.908825 TCCTCGGTTGAAATAAATTGAACTG 58.091 36.000 0.00 0.00 0.00 3.16
473 474 5.572896 CCTCGGTTGAAATAAATTGAACTGC 59.427 40.000 0.00 0.00 0.00 4.40
474 475 5.465935 TCGGTTGAAATAAATTGAACTGCC 58.534 37.500 0.00 0.00 0.00 4.85
475 476 4.625311 CGGTTGAAATAAATTGAACTGCCC 59.375 41.667 0.00 0.00 0.00 5.36
476 477 4.935205 GGTTGAAATAAATTGAACTGCCCC 59.065 41.667 0.00 0.00 0.00 5.80
477 478 4.448537 TGAAATAAATTGAACTGCCCCG 57.551 40.909 0.00 0.00 0.00 5.73
478 479 2.959507 AATAAATTGAACTGCCCCGC 57.040 45.000 0.00 0.00 0.00 6.13
479 480 1.846007 ATAAATTGAACTGCCCCGCA 58.154 45.000 0.00 0.00 36.92 5.69
480 481 1.621992 TAAATTGAACTGCCCCGCAA 58.378 45.000 0.00 0.00 38.41 4.85
481 482 0.755686 AAATTGAACTGCCCCGCAAA 59.244 45.000 0.00 0.00 38.41 3.68
482 483 0.755686 AATTGAACTGCCCCGCAAAA 59.244 45.000 0.00 0.00 38.41 2.44
483 484 0.755686 ATTGAACTGCCCCGCAAAAA 59.244 45.000 0.00 0.00 38.41 1.94
511 512 7.951565 GGAAAGAAATAAATTGAATTGCACACG 59.048 33.333 0.00 0.00 0.00 4.49
596 597 0.744771 GGAGAGATTTGGTGACCGGC 60.745 60.000 0.00 0.00 0.00 6.13
614 615 0.239347 GCTTCTGCGTTCATTGCTGT 59.761 50.000 0.00 0.00 33.56 4.40
734 1051 3.561725 AGCTTATTAGGTCAAAGCATCGC 59.438 43.478 8.78 0.00 46.35 4.58
834 1151 2.585088 CACATGCGCGCATTAATTATCG 59.415 45.455 41.73 28.94 33.90 2.92
875 1192 3.117491 ACACATGCATAGATCTTCCCG 57.883 47.619 0.00 0.00 0.00 5.14
998 1319 4.020218 CACACATCCAGGAAGAAACCTAGA 60.020 45.833 0.00 0.00 38.32 2.43
1153 1479 1.995626 AAGGATGGGTACTGCGGCT 60.996 57.895 0.00 0.00 0.00 5.52
1174 1500 2.391389 GGCGTCAACTACTGCAGCC 61.391 63.158 15.27 2.28 39.16 4.85
1226 1552 1.291877 GACAACAAGATCTGCGGCGT 61.292 55.000 9.37 0.00 0.00 5.68
1350 1676 2.156098 TCCTTGCTGGGCTGACCTT 61.156 57.895 0.00 0.00 41.11 3.50
1365 1691 0.400594 ACCTTAAGTGTGGCCACCTC 59.599 55.000 32.62 24.00 42.88 3.85
1408 1734 0.673437 TAACCTTTGCTGCAGCCAAC 59.327 50.000 34.64 9.27 41.18 3.77
1445 1771 3.222354 GACCGGAGTTCTGCGGTGT 62.222 63.158 34.86 17.30 34.79 4.16
1447 1773 1.290955 CCGGAGTTCTGCGGTGTTA 59.709 57.895 21.32 0.00 0.00 2.41
1449 1775 0.736325 CGGAGTTCTGCGGTGTTAGG 60.736 60.000 5.86 0.00 0.00 2.69
1478 1804 3.506096 CGCCTGCAGCATGGACAG 61.506 66.667 8.66 0.00 44.04 3.51
1551 1877 0.107214 GCCCGAATGGATCTTGTGGA 60.107 55.000 0.00 0.00 37.49 4.02
1703 2613 8.790718 AGAAATAATCAGTGGCAATAGCTAATG 58.209 33.333 4.31 4.31 46.76 1.90
1781 2703 4.463539 TCGGCAGTTGTCCTAATTAGTACA 59.536 41.667 6.78 6.78 0.00 2.90
1782 2704 4.565564 CGGCAGTTGTCCTAATTAGTACAC 59.434 45.833 10.16 6.55 0.00 2.90
1807 2729 2.425312 TCTGTTTTGTTGCCATCGTGTT 59.575 40.909 0.00 0.00 0.00 3.32
1860 2782 2.289547 TCGCCACTTGTTTTAGAGCAAC 59.710 45.455 0.00 0.00 0.00 4.17
1919 2841 8.556213 TTTACCTGTTGTACTCATGGTTATTC 57.444 34.615 0.00 0.00 0.00 1.75
1922 2844 6.655003 ACCTGTTGTACTCATGGTTATTCTTG 59.345 38.462 0.00 0.00 0.00 3.02
1923 2845 6.403636 CCTGTTGTACTCATGGTTATTCTTGC 60.404 42.308 0.00 0.00 0.00 4.01
1924 2846 6.237901 TGTTGTACTCATGGTTATTCTTGCT 58.762 36.000 0.00 0.00 0.00 3.91
1969 2932 8.299570 ACAATAGAACTGTGAATGGAAAATGAC 58.700 33.333 0.00 0.00 0.00 3.06
1974 2937 5.003160 ACTGTGAATGGAAAATGACGATCA 58.997 37.500 0.00 0.00 0.00 2.92
1979 2942 6.808212 GTGAATGGAAAATGACGATCATTGTT 59.192 34.615 12.06 9.33 45.57 2.83
2007 2973 4.895668 AAAATGGCATCACTGGAACAAT 57.104 36.364 0.00 0.00 38.70 2.71
2008 2974 4.895668 AAATGGCATCACTGGAACAATT 57.104 36.364 0.00 0.00 38.70 2.32
2009 2975 4.895668 AATGGCATCACTGGAACAATTT 57.104 36.364 0.00 0.00 38.70 1.82
2010 2976 4.895668 ATGGCATCACTGGAACAATTTT 57.104 36.364 0.00 0.00 38.70 1.82
2011 2977 4.686191 TGGCATCACTGGAACAATTTTT 57.314 36.364 0.00 0.00 38.70 1.94
2090 3088 1.182667 CTACCGTGGACACTGGATCA 58.817 55.000 16.30 4.65 0.00 2.92
2121 3119 8.998989 CGCTAAAATACATTTATGTCTGTTGTG 58.001 33.333 0.00 0.00 41.97 3.33
2130 3128 1.593196 TGTCTGTTGTGGCAGTAAGC 58.407 50.000 0.00 0.00 44.65 3.09
2139 3137 2.557924 TGTGGCAGTAAGCTCATTTTGG 59.442 45.455 0.00 0.00 44.79 3.28
2196 3194 2.039418 ACTGCGGGTATTAGAGCATCA 58.961 47.619 0.00 0.00 39.02 3.07
2202 3200 4.627467 GCGGGTATTAGAGCATCACTAATG 59.373 45.833 0.00 0.00 39.74 1.90
2214 3212 4.335594 GCATCACTAATGTGGACCCTAAAC 59.664 45.833 0.00 0.00 43.94 2.01
2217 3215 2.285977 CTAATGTGGACCCTAAACCGC 58.714 52.381 0.00 0.00 37.22 5.68
2226 3224 2.124901 CTAAACCGCCCGCATCCA 60.125 61.111 0.00 0.00 0.00 3.41
2231 3229 4.854924 CCGCCCGCATCCATGTGA 62.855 66.667 1.51 0.00 40.61 3.58
2235 3233 1.378382 CCCGCATCCATGTGAACCA 60.378 57.895 1.51 0.00 40.61 3.67
2248 3246 1.331399 TGAACCACACAGTCCGGACA 61.331 55.000 35.00 8.72 0.00 4.02
2263 3261 1.135315 CGGACATGTTTTGCCATCCAG 60.135 52.381 0.00 0.00 0.00 3.86
2270 3268 1.462731 TTTTGCCATCCAGCGCAGTT 61.463 50.000 11.47 0.00 36.14 3.16
2272 3270 2.747460 GCCATCCAGCGCAGTTCA 60.747 61.111 11.47 0.00 0.00 3.18
2283 3282 1.550065 CGCAGTTCAGTATCTGTCCG 58.450 55.000 0.00 0.00 34.57 4.79
2307 3306 1.203313 CGGTTCGGACGTGCTTTTC 59.797 57.895 5.27 0.00 0.00 2.29
2310 3309 1.957186 TTCGGACGTGCTTTTCCCG 60.957 57.895 5.27 4.22 41.36 5.14
2317 3316 1.739667 GTGCTTTTCCCGCAAACCT 59.260 52.632 0.00 0.00 39.39 3.50
2323 3322 0.753479 TTTCCCGCAAACCTGAAGCA 60.753 50.000 0.00 0.00 0.00 3.91
2337 3336 2.551459 CTGAAGCAAACCAAGGAGACTG 59.449 50.000 0.00 0.00 42.68 3.51
2340 3339 1.212935 AGCAAACCAAGGAGACTGTGT 59.787 47.619 0.00 0.00 42.68 3.72
2345 3344 1.669115 CAAGGAGACTGTGTGGGCG 60.669 63.158 0.00 0.00 42.68 6.13
2381 3380 2.185867 GCGCATCCGACAACCCTA 59.814 61.111 0.30 0.00 36.29 3.53
2382 3381 2.171725 GCGCATCCGACAACCCTAC 61.172 63.158 0.30 0.00 36.29 3.18
2402 3401 1.435346 CCCACCCAAAACCCTCTCCT 61.435 60.000 0.00 0.00 0.00 3.69
2411 3410 1.820866 AACCCTCTCCTGCCTCCTCT 61.821 60.000 0.00 0.00 0.00 3.69
2422 3421 0.392327 GCCTCCTCTGTGCTTTCTCC 60.392 60.000 0.00 0.00 0.00 3.71
2428 3427 0.250295 TCTGTGCTTTCTCCCCAACG 60.250 55.000 0.00 0.00 0.00 4.10
2434 3433 1.369091 CTTTCTCCCCAACGGATGCG 61.369 60.000 4.58 4.58 41.00 4.73
2436 3435 4.473520 CTCCCCAACGGATGCGCT 62.474 66.667 9.73 0.00 41.00 5.92
2479 3478 0.320421 GGTCTAGAGCCGCAACAACA 60.320 55.000 10.97 0.00 0.00 3.33
2509 3508 1.372872 CGCGTGATGTGACCTGACA 60.373 57.895 0.00 0.00 0.00 3.58
2510 3509 0.943835 CGCGTGATGTGACCTGACAA 60.944 55.000 0.00 0.00 0.00 3.18
2517 3516 1.374758 GTGACCTGACAAGAGGGCG 60.375 63.158 0.00 0.00 45.44 6.13
2519 3518 2.526873 ACCTGACAAGAGGGCGGT 60.527 61.111 0.00 0.00 37.45 5.68
2539 3538 0.179108 GCTAATCCACGCGACCTCTT 60.179 55.000 15.93 1.81 0.00 2.85
2540 3539 1.560923 CTAATCCACGCGACCTCTTG 58.439 55.000 15.93 0.00 0.00 3.02
2565 3564 2.680913 GCCGCTTCAATGCAGACGT 61.681 57.895 0.00 0.00 0.00 4.34
2574 3573 0.324614 AATGCAGACGTGTCATCCCA 59.675 50.000 0.00 0.00 0.00 4.37
2621 3620 2.781595 ATTGAAGCGGGTCGAGCGTT 62.782 55.000 8.77 1.78 40.04 4.84
2641 3640 3.988379 TTGTTTGCTTGATCTGGTCAC 57.012 42.857 0.00 0.00 36.32 3.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.826737 AGCAAATCCACCAAAGATAGATCTG 59.173 40.000 5.18 0.00 37.19 2.90
1 2 6.011122 AGCAAATCCACCAAAGATAGATCT 57.989 37.500 0.00 0.00 39.22 2.75
2 3 5.049818 CGAGCAAATCCACCAAAGATAGATC 60.050 44.000 0.00 0.00 0.00 2.75
3 4 4.818546 CGAGCAAATCCACCAAAGATAGAT 59.181 41.667 0.00 0.00 0.00 1.98
4 5 4.191544 CGAGCAAATCCACCAAAGATAGA 58.808 43.478 0.00 0.00 0.00 1.98
5 6 3.313526 CCGAGCAAATCCACCAAAGATAG 59.686 47.826 0.00 0.00 0.00 2.08
6 7 3.054728 TCCGAGCAAATCCACCAAAGATA 60.055 43.478 0.00 0.00 0.00 1.98
7 8 2.094675 CCGAGCAAATCCACCAAAGAT 58.905 47.619 0.00 0.00 0.00 2.40
8 9 1.073125 TCCGAGCAAATCCACCAAAGA 59.927 47.619 0.00 0.00 0.00 2.52
9 10 1.533625 TCCGAGCAAATCCACCAAAG 58.466 50.000 0.00 0.00 0.00 2.77
10 11 2.091541 GATCCGAGCAAATCCACCAAA 58.908 47.619 0.00 0.00 0.00 3.28
11 12 1.281867 AGATCCGAGCAAATCCACCAA 59.718 47.619 0.00 0.00 0.00 3.67
12 13 0.911769 AGATCCGAGCAAATCCACCA 59.088 50.000 0.00 0.00 0.00 4.17
13 14 1.672881 CAAGATCCGAGCAAATCCACC 59.327 52.381 0.00 0.00 0.00 4.61
14 15 2.352960 GACAAGATCCGAGCAAATCCAC 59.647 50.000 0.00 0.00 0.00 4.02
15 16 2.632377 GACAAGATCCGAGCAAATCCA 58.368 47.619 0.00 0.00 0.00 3.41
16 17 1.594862 CGACAAGATCCGAGCAAATCC 59.405 52.381 0.00 0.00 0.00 3.01
17 18 2.271800 ACGACAAGATCCGAGCAAATC 58.728 47.619 0.00 0.00 0.00 2.17
18 19 2.386661 ACGACAAGATCCGAGCAAAT 57.613 45.000 0.00 0.00 0.00 2.32
19 20 1.798223 CAACGACAAGATCCGAGCAAA 59.202 47.619 0.00 0.00 0.00 3.68
20 21 1.270094 ACAACGACAAGATCCGAGCAA 60.270 47.619 0.00 0.00 0.00 3.91
21 22 0.317160 ACAACGACAAGATCCGAGCA 59.683 50.000 0.00 0.00 0.00 4.26
22 23 1.390463 GAACAACGACAAGATCCGAGC 59.610 52.381 0.00 0.00 0.00 5.03
23 24 1.649171 CGAACAACGACAAGATCCGAG 59.351 52.381 0.00 0.00 45.77 4.63
24 25 1.001048 ACGAACAACGACAAGATCCGA 60.001 47.619 0.00 0.00 45.77 4.55
25 26 1.415374 ACGAACAACGACAAGATCCG 58.585 50.000 0.00 0.00 45.77 4.18
26 27 3.872560 AAACGAACAACGACAAGATCC 57.127 42.857 0.00 0.00 45.77 3.36
27 28 4.085415 ACGTAAACGAACAACGACAAGATC 60.085 41.667 9.86 0.00 45.77 2.75
28 29 3.798337 ACGTAAACGAACAACGACAAGAT 59.202 39.130 9.86 0.00 45.77 2.40
29 30 3.178267 ACGTAAACGAACAACGACAAGA 58.822 40.909 9.86 0.00 45.77 3.02
30 31 3.515692 GACGTAAACGAACAACGACAAG 58.484 45.455 9.86 0.00 45.77 3.16
31 32 2.281234 GGACGTAAACGAACAACGACAA 59.719 45.455 9.86 0.00 45.77 3.18
32 33 1.851666 GGACGTAAACGAACAACGACA 59.148 47.619 9.86 0.00 45.77 4.35
33 34 1.137180 CGGACGTAAACGAACAACGAC 60.137 52.381 9.86 5.26 45.77 4.34
34 35 1.119635 CGGACGTAAACGAACAACGA 58.880 50.000 9.86 0.00 45.77 3.85
36 37 1.587946 ACACGGACGTAAACGAACAAC 59.412 47.619 9.86 0.00 43.02 3.32
37 38 1.587490 CACACGGACGTAAACGAACAA 59.413 47.619 9.86 0.00 43.02 2.83
38 39 1.198767 CACACGGACGTAAACGAACA 58.801 50.000 9.86 0.00 43.02 3.18
39 40 1.187921 GACACACGGACGTAAACGAAC 59.812 52.381 9.86 3.04 43.02 3.95
40 41 1.476074 GACACACGGACGTAAACGAA 58.524 50.000 9.86 0.00 43.02 3.85
41 42 0.317770 GGACACACGGACGTAAACGA 60.318 55.000 9.86 0.00 43.02 3.85
42 43 0.318107 AGGACACACGGACGTAAACG 60.318 55.000 0.04 0.04 46.33 3.60
43 44 1.412387 GAGGACACACGGACGTAAAC 58.588 55.000 0.00 0.00 0.00 2.01
44 45 0.040157 CGAGGACACACGGACGTAAA 60.040 55.000 0.00 0.00 0.00 2.01
45 46 1.575922 CGAGGACACACGGACGTAA 59.424 57.895 0.00 0.00 0.00 3.18
46 47 3.256936 CGAGGACACACGGACGTA 58.743 61.111 0.00 0.00 0.00 3.57
52 53 0.320421 ATCCAAACCGAGGACACACG 60.320 55.000 0.00 0.00 38.13 4.49
53 54 1.002087 AGATCCAAACCGAGGACACAC 59.998 52.381 0.00 0.00 38.13 3.82
54 55 1.348064 AGATCCAAACCGAGGACACA 58.652 50.000 0.00 0.00 38.13 3.72
55 56 2.347731 GAAGATCCAAACCGAGGACAC 58.652 52.381 0.00 0.00 38.13 3.67
56 57 1.278127 GGAAGATCCAAACCGAGGACA 59.722 52.381 0.00 0.00 38.13 4.02
57 58 1.739371 CGGAAGATCCAAACCGAGGAC 60.739 57.143 10.51 0.00 46.94 3.85
58 59 0.535335 CGGAAGATCCAAACCGAGGA 59.465 55.000 10.51 0.00 46.94 3.71
59 60 3.065575 CGGAAGATCCAAACCGAGG 57.934 57.895 10.51 0.00 46.94 4.63
76 77 4.564116 AACCGCCGCCGTAGATCG 62.564 66.667 0.00 0.00 39.52 3.69
77 78 2.960129 CAACCGCCGCCGTAGATC 60.960 66.667 0.00 0.00 0.00 2.75
85 86 4.389576 CAGAACAGCAACCGCCGC 62.390 66.667 0.00 0.00 39.83 6.53
86 87 3.726517 CCAGAACAGCAACCGCCG 61.727 66.667 0.00 0.00 39.83 6.46
87 88 3.365265 CCCAGAACAGCAACCGCC 61.365 66.667 0.00 0.00 39.83 6.13
88 89 3.365265 CCCCAGAACAGCAACCGC 61.365 66.667 0.00 0.00 38.99 5.68
89 90 2.113139 ACCCCAGAACAGCAACCG 59.887 61.111 0.00 0.00 0.00 4.44
90 91 2.564721 GCACCCCAGAACAGCAACC 61.565 63.158 0.00 0.00 0.00 3.77
91 92 1.529244 AGCACCCCAGAACAGCAAC 60.529 57.895 0.00 0.00 0.00 4.17
92 93 1.529010 CAGCACCCCAGAACAGCAA 60.529 57.895 0.00 0.00 0.00 3.91
93 94 2.113774 CAGCACCCCAGAACAGCA 59.886 61.111 0.00 0.00 0.00 4.41
94 95 2.674380 CCAGCACCCCAGAACAGC 60.674 66.667 0.00 0.00 0.00 4.40
95 96 1.302832 GACCAGCACCCCAGAACAG 60.303 63.158 0.00 0.00 0.00 3.16
96 97 2.829384 GGACCAGCACCCCAGAACA 61.829 63.158 0.00 0.00 0.00 3.18
97 98 1.198759 TAGGACCAGCACCCCAGAAC 61.199 60.000 0.00 0.00 0.00 3.01
98 99 0.253160 ATAGGACCAGCACCCCAGAA 60.253 55.000 0.00 0.00 0.00 3.02
99 100 0.982852 CATAGGACCAGCACCCCAGA 60.983 60.000 0.00 0.00 0.00 3.86
100 101 1.528824 CATAGGACCAGCACCCCAG 59.471 63.158 0.00 0.00 0.00 4.45
101 102 2.000701 CCATAGGACCAGCACCCCA 61.001 63.158 0.00 0.00 0.00 4.96
102 103 2.757124 CCCATAGGACCAGCACCCC 61.757 68.421 0.00 0.00 33.47 4.95
103 104 2.757124 CCCCATAGGACCAGCACCC 61.757 68.421 0.00 0.00 38.24 4.61
104 105 2.919043 CCCCATAGGACCAGCACC 59.081 66.667 0.00 0.00 38.24 5.01
105 106 2.193248 GCCCCATAGGACCAGCAC 59.807 66.667 0.00 0.00 38.24 4.40
106 107 3.096495 GGCCCCATAGGACCAGCA 61.096 66.667 0.00 0.00 37.96 4.41
112 113 1.062734 TCGTTCTAAGGCCCCATAGGA 60.063 52.381 0.00 0.00 38.24 2.94
113 114 1.070289 GTCGTTCTAAGGCCCCATAGG 59.930 57.143 0.00 0.00 39.47 2.57
114 115 1.269621 CGTCGTTCTAAGGCCCCATAG 60.270 57.143 0.00 0.00 0.00 2.23
115 116 0.748450 CGTCGTTCTAAGGCCCCATA 59.252 55.000 0.00 0.00 0.00 2.74
116 117 0.974010 TCGTCGTTCTAAGGCCCCAT 60.974 55.000 0.00 0.00 0.00 4.00
117 118 1.607178 TCGTCGTTCTAAGGCCCCA 60.607 57.895 0.00 0.00 0.00 4.96
118 119 1.153686 GTCGTCGTTCTAAGGCCCC 60.154 63.158 0.00 0.00 0.00 5.80
119 120 0.245813 AAGTCGTCGTTCTAAGGCCC 59.754 55.000 0.00 0.00 0.00 5.80
120 121 1.626747 GAAGTCGTCGTTCTAAGGCC 58.373 55.000 0.00 0.00 0.00 5.19
121 122 1.626747 GGAAGTCGTCGTTCTAAGGC 58.373 55.000 0.00 0.00 0.00 4.35
122 123 1.467035 CGGGAAGTCGTCGTTCTAAGG 60.467 57.143 0.00 0.00 0.00 2.69
123 124 1.466167 TCGGGAAGTCGTCGTTCTAAG 59.534 52.381 0.00 0.00 0.00 2.18
124 125 1.197721 GTCGGGAAGTCGTCGTTCTAA 59.802 52.381 0.00 0.00 0.00 2.10
125 126 0.798776 GTCGGGAAGTCGTCGTTCTA 59.201 55.000 0.00 0.00 0.00 2.10
126 127 0.888285 AGTCGGGAAGTCGTCGTTCT 60.888 55.000 0.00 0.00 0.00 3.01
127 128 0.728466 CAGTCGGGAAGTCGTCGTTC 60.728 60.000 0.00 0.00 0.00 3.95
128 129 1.285023 CAGTCGGGAAGTCGTCGTT 59.715 57.895 0.00 0.00 0.00 3.85
129 130 1.849976 GACAGTCGGGAAGTCGTCGT 61.850 60.000 0.00 0.00 0.00 4.34
130 131 1.154263 GACAGTCGGGAAGTCGTCG 60.154 63.158 0.00 0.00 0.00 5.12
131 132 1.130186 GTAGACAGTCGGGAAGTCGTC 59.870 57.143 0.00 0.00 37.36 4.20
132 133 1.163554 GTAGACAGTCGGGAAGTCGT 58.836 55.000 0.00 0.00 37.36 4.34
133 134 1.451067 AGTAGACAGTCGGGAAGTCG 58.549 55.000 0.00 0.00 37.36 4.18
134 135 3.341823 TGTAGTAGACAGTCGGGAAGTC 58.658 50.000 0.00 0.00 32.86 3.01
135 136 3.430042 TGTAGTAGACAGTCGGGAAGT 57.570 47.619 0.00 0.00 32.86 3.01
136 137 3.504906 TGTTGTAGTAGACAGTCGGGAAG 59.495 47.826 0.00 0.00 39.88 3.46
137 138 3.489355 TGTTGTAGTAGACAGTCGGGAA 58.511 45.455 0.00 0.00 39.88 3.97
138 139 3.144657 TGTTGTAGTAGACAGTCGGGA 57.855 47.619 0.00 0.00 39.88 5.14
139 140 3.255149 ACTTGTTGTAGTAGACAGTCGGG 59.745 47.826 0.00 0.00 39.88 5.14
140 141 4.500603 ACTTGTTGTAGTAGACAGTCGG 57.499 45.455 0.00 0.00 39.88 4.79
141 142 5.173312 CACAACTTGTTGTAGTAGACAGTCG 59.827 44.000 17.26 0.00 39.88 4.18
142 143 5.050972 GCACAACTTGTTGTAGTAGACAGTC 60.051 44.000 17.26 0.00 39.88 3.51
143 144 4.809426 GCACAACTTGTTGTAGTAGACAGT 59.191 41.667 17.26 0.00 39.88 3.55
144 145 4.211374 GGCACAACTTGTTGTAGTAGACAG 59.789 45.833 17.26 5.63 39.88 3.51
145 146 4.124238 GGCACAACTTGTTGTAGTAGACA 58.876 43.478 17.26 0.00 35.78 3.41
146 147 3.497262 GGGCACAACTTGTTGTAGTAGAC 59.503 47.826 17.26 8.51 33.17 2.59
147 148 3.735591 GGGCACAACTTGTTGTAGTAGA 58.264 45.455 17.26 0.00 33.17 2.59
148 149 2.478894 CGGGCACAACTTGTTGTAGTAG 59.521 50.000 17.26 7.80 33.17 2.57
149 150 2.485903 CGGGCACAACTTGTTGTAGTA 58.514 47.619 17.26 0.00 33.17 1.82
150 151 1.305201 CGGGCACAACTTGTTGTAGT 58.695 50.000 17.26 0.00 33.17 2.73
151 152 0.591170 CCGGGCACAACTTGTTGTAG 59.409 55.000 17.26 12.96 33.17 2.74
152 153 1.448922 GCCGGGCACAACTTGTTGTA 61.449 55.000 15.62 0.00 33.17 2.41
153 154 2.781158 GCCGGGCACAACTTGTTGT 61.781 57.895 15.62 12.73 35.14 3.32
154 155 2.027460 GCCGGGCACAACTTGTTG 59.973 61.111 15.62 11.44 0.00 3.33
155 156 2.123897 AGCCGGGCACAACTTGTT 60.124 55.556 23.09 0.00 0.00 2.83
156 157 2.594592 GAGCCGGGCACAACTTGT 60.595 61.111 23.09 0.00 0.00 3.16
157 158 3.365265 GGAGCCGGGCACAACTTG 61.365 66.667 23.09 0.00 0.00 3.16
175 176 4.996434 CATCGCCCCTCCATCGCC 62.996 72.222 0.00 0.00 0.00 5.54
176 177 3.928779 TCATCGCCCCTCCATCGC 61.929 66.667 0.00 0.00 0.00 4.58
177 178 2.029666 GTCATCGCCCCTCCATCG 59.970 66.667 0.00 0.00 0.00 3.84
178 179 2.029666 CGTCATCGCCCCTCCATC 59.970 66.667 0.00 0.00 0.00 3.51
179 180 3.550431 CCGTCATCGCCCCTCCAT 61.550 66.667 0.00 0.00 35.54 3.41
205 206 3.479370 CTCCAAAGCGAGCCGAAG 58.521 61.111 0.00 0.00 0.00 3.79
215 216 1.986378 CGACGACTACAAGCTCCAAAG 59.014 52.381 0.00 0.00 0.00 2.77
216 217 1.933500 GCGACGACTACAAGCTCCAAA 60.934 52.381 0.00 0.00 0.00 3.28
217 218 0.388134 GCGACGACTACAAGCTCCAA 60.388 55.000 0.00 0.00 0.00 3.53
218 219 1.211969 GCGACGACTACAAGCTCCA 59.788 57.895 0.00 0.00 0.00 3.86
219 220 0.731417 TAGCGACGACTACAAGCTCC 59.269 55.000 0.00 0.00 39.14 4.70
220 221 1.268133 CCTAGCGACGACTACAAGCTC 60.268 57.143 0.00 0.00 39.14 4.09
221 222 0.733729 CCTAGCGACGACTACAAGCT 59.266 55.000 0.00 0.00 41.45 3.74
222 223 0.450983 ACCTAGCGACGACTACAAGC 59.549 55.000 0.00 0.00 0.00 4.01
223 224 1.202154 CCACCTAGCGACGACTACAAG 60.202 57.143 0.00 0.00 0.00 3.16
224 225 0.806868 CCACCTAGCGACGACTACAA 59.193 55.000 0.00 0.00 0.00 2.41
225 226 0.321919 ACCACCTAGCGACGACTACA 60.322 55.000 0.00 0.00 0.00 2.74
226 227 0.376502 GACCACCTAGCGACGACTAC 59.623 60.000 0.00 0.00 0.00 2.73
227 228 0.251354 AGACCACCTAGCGACGACTA 59.749 55.000 0.00 0.00 0.00 2.59
228 229 0.251354 TAGACCACCTAGCGACGACT 59.749 55.000 0.00 0.00 0.00 4.18
229 230 0.376502 GTAGACCACCTAGCGACGAC 59.623 60.000 0.00 0.00 0.00 4.34
230 231 1.086067 CGTAGACCACCTAGCGACGA 61.086 60.000 0.00 0.00 0.00 4.20
231 232 1.086067 TCGTAGACCACCTAGCGACG 61.086 60.000 0.00 0.00 31.20 5.12
232 233 1.089920 TTCGTAGACCACCTAGCGAC 58.910 55.000 0.00 0.00 34.32 5.19
233 234 2.048444 ATTCGTAGACCACCTAGCGA 57.952 50.000 0.00 0.00 34.32 4.93
234 235 2.858344 CAAATTCGTAGACCACCTAGCG 59.142 50.000 0.00 0.00 34.32 4.26
235 236 3.118884 TCCAAATTCGTAGACCACCTAGC 60.119 47.826 0.00 0.00 34.32 3.42
236 237 4.730949 TCCAAATTCGTAGACCACCTAG 57.269 45.455 0.00 0.00 34.32 3.02
237 238 4.468510 ACATCCAAATTCGTAGACCACCTA 59.531 41.667 0.00 0.00 34.32 3.08
238 239 3.263425 ACATCCAAATTCGTAGACCACCT 59.737 43.478 0.00 0.00 34.32 4.00
239 240 3.606687 ACATCCAAATTCGTAGACCACC 58.393 45.455 0.00 0.00 34.32 4.61
240 241 6.920569 ATTACATCCAAATTCGTAGACCAC 57.079 37.500 0.00 0.00 34.32 4.16
241 242 7.931578 AAATTACATCCAAATTCGTAGACCA 57.068 32.000 0.00 0.00 34.32 4.02
264 265 9.982291 GCAGTACAACGAATATCAGAAATAAAA 57.018 29.630 0.00 0.00 0.00 1.52
265 266 8.609176 GGCAGTACAACGAATATCAGAAATAAA 58.391 33.333 0.00 0.00 0.00 1.40
266 267 7.766738 TGGCAGTACAACGAATATCAGAAATAA 59.233 33.333 0.00 0.00 0.00 1.40
267 268 7.269316 TGGCAGTACAACGAATATCAGAAATA 58.731 34.615 0.00 0.00 0.00 1.40
268 269 6.112734 TGGCAGTACAACGAATATCAGAAAT 58.887 36.000 0.00 0.00 0.00 2.17
269 270 5.483811 TGGCAGTACAACGAATATCAGAAA 58.516 37.500 0.00 0.00 0.00 2.52
270 271 5.079689 TGGCAGTACAACGAATATCAGAA 57.920 39.130 0.00 0.00 0.00 3.02
271 272 4.729227 TGGCAGTACAACGAATATCAGA 57.271 40.909 0.00 0.00 0.00 3.27
272 273 5.049828 TCATGGCAGTACAACGAATATCAG 58.950 41.667 0.00 0.00 0.00 2.90
273 274 5.017294 TCATGGCAGTACAACGAATATCA 57.983 39.130 0.00 0.00 0.00 2.15
274 275 6.202762 TCAATCATGGCAGTACAACGAATATC 59.797 38.462 0.00 0.00 0.00 1.63
275 276 6.054941 TCAATCATGGCAGTACAACGAATAT 58.945 36.000 0.00 0.00 0.00 1.28
276 277 5.423886 TCAATCATGGCAGTACAACGAATA 58.576 37.500 0.00 0.00 0.00 1.75
277 278 4.260985 TCAATCATGGCAGTACAACGAAT 58.739 39.130 0.00 0.00 0.00 3.34
278 279 3.669536 TCAATCATGGCAGTACAACGAA 58.330 40.909 0.00 0.00 0.00 3.85
279 280 3.326836 TCAATCATGGCAGTACAACGA 57.673 42.857 0.00 0.00 0.00 3.85
280 281 3.684305 TCTTCAATCATGGCAGTACAACG 59.316 43.478 0.00 0.00 0.00 4.10
281 282 5.355071 TCATCTTCAATCATGGCAGTACAAC 59.645 40.000 0.00 0.00 0.00 3.32
282 283 5.499313 TCATCTTCAATCATGGCAGTACAA 58.501 37.500 0.00 0.00 0.00 2.41
283 284 5.101648 TCATCTTCAATCATGGCAGTACA 57.898 39.130 0.00 0.00 0.00 2.90
284 285 6.630444 ATTCATCTTCAATCATGGCAGTAC 57.370 37.500 0.00 0.00 0.00 2.73
285 286 7.738847 TCTATTCATCTTCAATCATGGCAGTA 58.261 34.615 0.00 0.00 0.00 2.74
286 287 6.598503 TCTATTCATCTTCAATCATGGCAGT 58.401 36.000 0.00 0.00 0.00 4.40
287 288 7.390718 TCATCTATTCATCTTCAATCATGGCAG 59.609 37.037 0.00 0.00 0.00 4.85
288 289 7.228590 TCATCTATTCATCTTCAATCATGGCA 58.771 34.615 0.00 0.00 0.00 4.92
289 290 7.606839 TCTCATCTATTCATCTTCAATCATGGC 59.393 37.037 0.00 0.00 0.00 4.40
290 291 9.503399 TTCTCATCTATTCATCTTCAATCATGG 57.497 33.333 0.00 0.00 0.00 3.66
299 300 9.745018 TGGAAAAACTTCTCATCTATTCATCTT 57.255 29.630 0.00 0.00 0.00 2.40
300 301 9.745018 TTGGAAAAACTTCTCATCTATTCATCT 57.255 29.630 0.00 0.00 0.00 2.90
327 328 9.769093 CTAATTGCGCTTAACTGTATAGTTTTT 57.231 29.630 10.35 0.00 44.57 1.94
328 329 9.158233 TCTAATTGCGCTTAACTGTATAGTTTT 57.842 29.630 10.35 0.00 44.57 2.43
329 330 8.712285 TCTAATTGCGCTTAACTGTATAGTTT 57.288 30.769 10.35 0.00 44.57 2.66
331 332 8.712285 TTTCTAATTGCGCTTAACTGTATAGT 57.288 30.769 9.73 0.00 39.32 2.12
334 335 8.893727 AGAATTTCTAATTGCGCTTAACTGTAT 58.106 29.630 9.73 0.00 0.00 2.29
335 336 8.263940 AGAATTTCTAATTGCGCTTAACTGTA 57.736 30.769 9.73 0.00 0.00 2.74
336 337 7.094805 TGAGAATTTCTAATTGCGCTTAACTGT 60.095 33.333 9.73 0.00 0.00 3.55
337 338 7.243487 TGAGAATTTCTAATTGCGCTTAACTG 58.757 34.615 9.73 0.00 0.00 3.16
338 339 7.377766 TGAGAATTTCTAATTGCGCTTAACT 57.622 32.000 9.73 0.00 0.00 2.24
339 340 8.447787 TTTGAGAATTTCTAATTGCGCTTAAC 57.552 30.769 9.73 0.00 0.00 2.01
340 341 8.911662 GTTTTGAGAATTTCTAATTGCGCTTAA 58.088 29.630 9.73 0.00 0.00 1.85
341 342 7.540745 GGTTTTGAGAATTTCTAATTGCGCTTA 59.459 33.333 9.73 0.00 0.00 3.09
342 343 6.366061 GGTTTTGAGAATTTCTAATTGCGCTT 59.634 34.615 9.73 0.00 0.00 4.68
343 344 5.863935 GGTTTTGAGAATTTCTAATTGCGCT 59.136 36.000 9.73 0.00 0.00 5.92
344 345 5.863935 AGGTTTTGAGAATTTCTAATTGCGC 59.136 36.000 0.00 0.00 0.00 6.09
345 346 7.594758 TGAAGGTTTTGAGAATTTCTAATTGCG 59.405 33.333 0.00 0.00 0.00 4.85
346 347 8.816640 TGAAGGTTTTGAGAATTTCTAATTGC 57.183 30.769 0.00 0.00 0.00 3.56
361 362 9.848172 CGAATTGTAAAATCTTTGAAGGTTTTG 57.152 29.630 19.73 3.22 45.94 2.44
363 364 7.708752 TGCGAATTGTAAAATCTTTGAAGGTTT 59.291 29.630 0.00 0.00 40.91 3.27
364 365 7.206687 TGCGAATTGTAAAATCTTTGAAGGTT 58.793 30.769 0.00 0.00 0.00 3.50
365 366 6.744112 TGCGAATTGTAAAATCTTTGAAGGT 58.256 32.000 0.00 0.00 0.00 3.50
366 367 7.816945 ATGCGAATTGTAAAATCTTTGAAGG 57.183 32.000 0.00 0.00 0.00 3.46
367 368 9.773328 TCTATGCGAATTGTAAAATCTTTGAAG 57.227 29.630 0.00 0.00 0.00 3.02
374 375 9.559958 CCCAATATCTATGCGAATTGTAAAATC 57.440 33.333 0.00 0.00 0.00 2.17
375 376 9.295825 TCCCAATATCTATGCGAATTGTAAAAT 57.704 29.630 0.00 0.00 0.00 1.82
376 377 8.684386 TCCCAATATCTATGCGAATTGTAAAA 57.316 30.769 0.00 0.00 0.00 1.52
377 378 8.862325 ATCCCAATATCTATGCGAATTGTAAA 57.138 30.769 0.00 0.00 0.00 2.01
378 379 8.862325 AATCCCAATATCTATGCGAATTGTAA 57.138 30.769 0.00 0.00 0.00 2.41
379 380 8.100164 TGAATCCCAATATCTATGCGAATTGTA 58.900 33.333 0.00 0.00 0.00 2.41
380 381 6.942005 TGAATCCCAATATCTATGCGAATTGT 59.058 34.615 0.00 0.00 0.00 2.71
381 382 7.246311 GTGAATCCCAATATCTATGCGAATTG 58.754 38.462 0.00 0.00 0.00 2.32
382 383 6.092670 CGTGAATCCCAATATCTATGCGAATT 59.907 38.462 0.00 0.00 0.00 2.17
383 384 5.582269 CGTGAATCCCAATATCTATGCGAAT 59.418 40.000 0.00 0.00 0.00 3.34
384 385 4.929211 CGTGAATCCCAATATCTATGCGAA 59.071 41.667 0.00 0.00 0.00 4.70
385 386 4.219725 TCGTGAATCCCAATATCTATGCGA 59.780 41.667 0.00 0.00 0.00 5.10
386 387 4.494484 TCGTGAATCCCAATATCTATGCG 58.506 43.478 0.00 0.00 0.00 4.73
387 388 5.724328 TCTCGTGAATCCCAATATCTATGC 58.276 41.667 0.00 0.00 0.00 3.14
388 389 6.815641 CCTTCTCGTGAATCCCAATATCTATG 59.184 42.308 0.00 0.00 0.00 2.23
389 390 6.575254 GCCTTCTCGTGAATCCCAATATCTAT 60.575 42.308 0.00 0.00 0.00 1.98
390 391 5.279506 GCCTTCTCGTGAATCCCAATATCTA 60.280 44.000 0.00 0.00 0.00 1.98
391 392 4.503991 GCCTTCTCGTGAATCCCAATATCT 60.504 45.833 0.00 0.00 0.00 1.98
392 393 3.748568 GCCTTCTCGTGAATCCCAATATC 59.251 47.826 0.00 0.00 0.00 1.63
393 394 3.136443 TGCCTTCTCGTGAATCCCAATAT 59.864 43.478 0.00 0.00 0.00 1.28
394 395 2.503765 TGCCTTCTCGTGAATCCCAATA 59.496 45.455 0.00 0.00 0.00 1.90
395 396 1.281867 TGCCTTCTCGTGAATCCCAAT 59.718 47.619 0.00 0.00 0.00 3.16
396 397 0.690192 TGCCTTCTCGTGAATCCCAA 59.310 50.000 0.00 0.00 0.00 4.12
397 398 0.690192 TTGCCTTCTCGTGAATCCCA 59.310 50.000 0.00 0.00 0.00 4.37
398 399 1.740025 CTTTGCCTTCTCGTGAATCCC 59.260 52.381 0.00 0.00 0.00 3.85
399 400 2.160417 CACTTTGCCTTCTCGTGAATCC 59.840 50.000 0.00 0.00 0.00 3.01
400 401 3.067106 TCACTTTGCCTTCTCGTGAATC 58.933 45.455 0.00 0.00 32.26 2.52
401 402 3.126001 TCACTTTGCCTTCTCGTGAAT 57.874 42.857 0.00 0.00 32.26 2.57
402 403 2.613026 TCACTTTGCCTTCTCGTGAA 57.387 45.000 0.00 0.00 32.26 3.18
403 404 2.158957 ACTTCACTTTGCCTTCTCGTGA 60.159 45.455 0.00 0.00 33.25 4.35
404 405 2.213499 ACTTCACTTTGCCTTCTCGTG 58.787 47.619 0.00 0.00 0.00 4.35
405 406 2.622064 ACTTCACTTTGCCTTCTCGT 57.378 45.000 0.00 0.00 0.00 4.18
406 407 3.654414 AGTACTTCACTTTGCCTTCTCG 58.346 45.455 0.00 0.00 31.59 4.04
425 426 9.091220 AGGAAAGTAGTACTATGTCAAGAAAGT 57.909 33.333 5.75 0.00 0.00 2.66
426 427 9.575783 GAGGAAAGTAGTACTATGTCAAGAAAG 57.424 37.037 5.75 0.00 0.00 2.62
427 428 8.242053 CGAGGAAAGTAGTACTATGTCAAGAAA 58.758 37.037 5.75 0.00 0.00 2.52
428 429 7.148120 CCGAGGAAAGTAGTACTATGTCAAGAA 60.148 40.741 5.75 0.00 0.00 2.52
429 430 6.318144 CCGAGGAAAGTAGTACTATGTCAAGA 59.682 42.308 5.75 0.00 0.00 3.02
430 431 6.095160 ACCGAGGAAAGTAGTACTATGTCAAG 59.905 42.308 5.75 0.00 0.00 3.02
431 432 5.948162 ACCGAGGAAAGTAGTACTATGTCAA 59.052 40.000 5.75 0.00 0.00 3.18
432 433 5.503927 ACCGAGGAAAGTAGTACTATGTCA 58.496 41.667 5.75 0.00 0.00 3.58
433 434 6.094603 TCAACCGAGGAAAGTAGTACTATGTC 59.905 42.308 5.75 4.15 0.00 3.06
434 435 5.948162 TCAACCGAGGAAAGTAGTACTATGT 59.052 40.000 5.75 0.00 0.00 2.29
435 436 6.446781 TCAACCGAGGAAAGTAGTACTATG 57.553 41.667 5.75 0.00 0.00 2.23
436 437 7.472334 TTTCAACCGAGGAAAGTAGTACTAT 57.528 36.000 5.75 0.00 31.13 2.12
437 438 6.899393 TTTCAACCGAGGAAAGTAGTACTA 57.101 37.500 2.50 0.00 31.13 1.82
438 439 5.796424 TTTCAACCGAGGAAAGTAGTACT 57.204 39.130 0.00 0.00 31.13 2.73
439 440 8.538409 TTTATTTCAACCGAGGAAAGTAGTAC 57.462 34.615 0.00 0.00 37.64 2.73
440 441 9.729281 AATTTATTTCAACCGAGGAAAGTAGTA 57.271 29.630 0.00 0.00 37.64 1.82
441 442 8.512138 CAATTTATTTCAACCGAGGAAAGTAGT 58.488 33.333 0.00 0.00 37.64 2.73
442 443 8.726988 TCAATTTATTTCAACCGAGGAAAGTAG 58.273 33.333 0.00 0.00 37.64 2.57
443 444 8.624367 TCAATTTATTTCAACCGAGGAAAGTA 57.376 30.769 0.00 0.00 37.64 2.24
444 445 7.519032 TCAATTTATTTCAACCGAGGAAAGT 57.481 32.000 0.00 0.00 37.64 2.66
445 446 8.082242 AGTTCAATTTATTTCAACCGAGGAAAG 58.918 33.333 0.00 0.00 37.64 2.62
446 447 7.865385 CAGTTCAATTTATTTCAACCGAGGAAA 59.135 33.333 0.00 0.00 38.49 3.13
447 448 7.367285 CAGTTCAATTTATTTCAACCGAGGAA 58.633 34.615 0.00 0.00 0.00 3.36
448 449 6.569610 GCAGTTCAATTTATTTCAACCGAGGA 60.570 38.462 0.00 0.00 0.00 3.71
449 450 5.572896 GCAGTTCAATTTATTTCAACCGAGG 59.427 40.000 0.00 0.00 0.00 4.63
450 451 5.572896 GGCAGTTCAATTTATTTCAACCGAG 59.427 40.000 0.00 0.00 0.00 4.63
451 452 5.465935 GGCAGTTCAATTTATTTCAACCGA 58.534 37.500 0.00 0.00 0.00 4.69
452 453 4.625311 GGGCAGTTCAATTTATTTCAACCG 59.375 41.667 0.00 0.00 0.00 4.44
453 454 4.935205 GGGGCAGTTCAATTTATTTCAACC 59.065 41.667 0.00 0.00 0.00 3.77
454 455 4.625311 CGGGGCAGTTCAATTTATTTCAAC 59.375 41.667 0.00 0.00 0.00 3.18
455 456 4.815269 CGGGGCAGTTCAATTTATTTCAA 58.185 39.130 0.00 0.00 0.00 2.69
456 457 3.367910 GCGGGGCAGTTCAATTTATTTCA 60.368 43.478 0.00 0.00 0.00 2.69
457 458 3.186909 GCGGGGCAGTTCAATTTATTTC 58.813 45.455 0.00 0.00 0.00 2.17
458 459 2.564947 TGCGGGGCAGTTCAATTTATTT 59.435 40.909 0.00 0.00 33.32 1.40
459 460 2.175202 TGCGGGGCAGTTCAATTTATT 58.825 42.857 0.00 0.00 33.32 1.40
460 461 1.846007 TGCGGGGCAGTTCAATTTAT 58.154 45.000 0.00 0.00 33.32 1.40
461 462 1.621992 TTGCGGGGCAGTTCAATTTA 58.378 45.000 0.00 0.00 40.61 1.40
462 463 0.755686 TTTGCGGGGCAGTTCAATTT 59.244 45.000 0.00 0.00 40.61 1.82
463 464 0.755686 TTTTGCGGGGCAGTTCAATT 59.244 45.000 0.00 0.00 40.61 2.32
464 465 0.755686 TTTTTGCGGGGCAGTTCAAT 59.244 45.000 0.00 0.00 40.61 2.57
465 466 2.202866 TTTTTGCGGGGCAGTTCAA 58.797 47.368 0.00 0.00 40.61 2.69
466 467 3.941081 TTTTTGCGGGGCAGTTCA 58.059 50.000 0.00 0.00 40.61 3.18
483 484 9.558396 TGTGCAATTCAATTTATTTCTTTCCTT 57.442 25.926 0.00 0.00 0.00 3.36
484 485 8.992073 GTGTGCAATTCAATTTATTTCTTTCCT 58.008 29.630 0.00 0.00 0.00 3.36
485 486 7.951565 CGTGTGCAATTCAATTTATTTCTTTCC 59.048 33.333 0.00 0.00 0.00 3.13
486 487 8.698854 TCGTGTGCAATTCAATTTATTTCTTTC 58.301 29.630 0.00 0.00 0.00 2.62
487 488 8.586570 TCGTGTGCAATTCAATTTATTTCTTT 57.413 26.923 0.00 0.00 0.00 2.52
488 489 8.081633 TCTCGTGTGCAATTCAATTTATTTCTT 58.918 29.630 0.00 0.00 0.00 2.52
489 490 7.538678 GTCTCGTGTGCAATTCAATTTATTTCT 59.461 33.333 0.00 0.00 0.00 2.52
501 502 1.333619 GGTTGTGTCTCGTGTGCAATT 59.666 47.619 0.00 0.00 0.00 2.32
503 504 0.107897 AGGTTGTGTCTCGTGTGCAA 60.108 50.000 0.00 0.00 0.00 4.08
511 512 4.022935 TGCAATTCATGAAGGTTGTGTCTC 60.023 41.667 18.43 6.55 0.00 3.36
564 565 2.839486 TCTCTCCACATGCTCGTTTT 57.161 45.000 0.00 0.00 0.00 2.43
596 597 2.738846 ACTACAGCAATGAACGCAGAAG 59.261 45.455 0.00 0.00 0.00 2.85
614 615 2.426024 GTGTCGATGAGGCAGGTTACTA 59.574 50.000 0.00 0.00 33.59 1.82
734 1051 5.678583 TGAGATCTTATCTTTCCCAGCAAG 58.321 41.667 0.00 0.00 40.38 4.01
834 1151 6.094325 TGTGTTACCAACGGAAAATATGATCC 59.906 38.462 0.00 0.00 0.00 3.36
875 1192 1.598130 GATACCTCGCCATGTGCCC 60.598 63.158 0.00 0.00 36.24 5.36
998 1319 0.255318 CAGCAAGAGGCCCTTCATCT 59.745 55.000 0.00 0.00 46.50 2.90
1153 1479 0.602638 CTGCAGTAGTTGACGCCCAA 60.603 55.000 5.25 0.00 0.00 4.12
1205 1531 1.970917 GCCGCAGATCTTGTTGTCGG 61.971 60.000 0.00 2.15 37.19 4.79
1350 1676 2.345991 GCGAGGTGGCCACACTTA 59.654 61.111 35.78 0.00 46.85 2.24
1365 1691 0.528249 GGCATTGCTTACCATTGGCG 60.528 55.000 8.82 0.00 39.50 5.69
1408 1734 3.632145 GGTCCTAAGCCACAATAACCATG 59.368 47.826 0.00 0.00 0.00 3.66
1530 1856 1.140852 CCACAAGATCCATTCGGGCTA 59.859 52.381 0.00 0.00 36.21 3.93
1535 1861 2.679837 CCAAGTCCACAAGATCCATTCG 59.320 50.000 0.00 0.00 0.00 3.34
1537 1863 2.225091 TGCCAAGTCCACAAGATCCATT 60.225 45.455 0.00 0.00 0.00 3.16
1551 1877 3.778265 ACCACAATAATCCTTGCCAAGT 58.222 40.909 3.37 0.00 0.00 3.16
1703 2613 9.923143 AAGTAAAACTTAATTTGGGACAATAGC 57.077 29.630 0.00 0.00 39.50 2.97
1807 2729 9.154632 AGTACCACCAGATCATACAATAACATA 57.845 33.333 0.00 0.00 0.00 2.29
1860 2782 5.762045 CACCAGTTGTGTATTGAAAGGAAG 58.238 41.667 0.00 0.00 40.26 3.46
1990 2956 4.686191 AAAAATTGTTCCAGTGATGCCA 57.314 36.364 0.00 0.00 0.00 4.92
2008 2974 8.447833 CAATAGTACAATTCGTAGCAGGAAAAA 58.552 33.333 0.00 0.00 0.00 1.94
2009 2975 7.820386 TCAATAGTACAATTCGTAGCAGGAAAA 59.180 33.333 0.00 0.00 0.00 2.29
2010 2976 7.324935 TCAATAGTACAATTCGTAGCAGGAAA 58.675 34.615 0.00 0.00 0.00 3.13
2011 2977 6.869695 TCAATAGTACAATTCGTAGCAGGAA 58.130 36.000 0.00 0.00 0.00 3.36
2012 2978 6.459670 TCAATAGTACAATTCGTAGCAGGA 57.540 37.500 0.00 0.00 0.00 3.86
2013 2979 6.201044 CCTTCAATAGTACAATTCGTAGCAGG 59.799 42.308 0.00 0.00 0.00 4.85
2014 2980 6.757010 ACCTTCAATAGTACAATTCGTAGCAG 59.243 38.462 0.00 0.00 0.00 4.24
2090 3088 8.604035 CAGACATAAATGTATTTTAGCGTCTGT 58.396 33.333 19.72 6.63 45.69 3.41
2096 3094 9.289303 CCACAACAGACATAAATGTATTTTAGC 57.711 33.333 0.00 0.00 41.95 3.09
2121 3119 6.396829 AATATCCAAAATGAGCTTACTGCC 57.603 37.500 0.00 0.00 44.23 4.85
2139 3137 8.184848 GGGCTTTTGTTGTCTTCTCTAAATATC 58.815 37.037 0.00 0.00 0.00 1.63
2151 3149 2.086610 ATGGTGGGCTTTTGTTGTCT 57.913 45.000 0.00 0.00 0.00 3.41
2196 3194 2.355412 GCGGTTTAGGGTCCACATTAGT 60.355 50.000 0.00 0.00 0.00 2.24
2202 3200 2.045634 GGGCGGTTTAGGGTCCAC 60.046 66.667 0.00 0.00 0.00 4.02
2214 3212 4.854924 TCACATGGATGCGGGCGG 62.855 66.667 0.00 0.00 0.00 6.13
2217 3215 1.378382 TGGTTCACATGGATGCGGG 60.378 57.895 0.00 0.00 0.00 6.13
2231 3229 0.250295 CATGTCCGGACTGTGTGGTT 60.250 55.000 33.39 7.04 0.00 3.67
2235 3233 1.946768 CAAAACATGTCCGGACTGTGT 59.053 47.619 33.39 30.77 34.22 3.72
2239 3237 0.179004 TGGCAAAACATGTCCGGACT 60.179 50.000 33.39 17.38 30.45 3.85
2242 3240 0.173255 GGATGGCAAAACATGTCCGG 59.827 55.000 0.00 0.00 30.45 5.14
2248 3246 1.216178 GCGCTGGATGGCAAAACAT 59.784 52.632 0.00 0.00 0.00 2.71
2263 3261 1.281899 GGACAGATACTGAACTGCGC 58.718 55.000 0.00 0.00 37.61 6.09
2270 3268 2.104267 GTCCGCGGACAGATACTGA 58.896 57.895 44.88 12.82 44.02 3.41
2301 3300 0.387565 TTCAGGTTTGCGGGAAAAGC 59.612 50.000 0.00 0.00 37.72 3.51
2307 3306 0.597377 GTTTGCTTCAGGTTTGCGGG 60.597 55.000 0.00 0.00 0.00 6.13
2310 3309 2.204237 CTTGGTTTGCTTCAGGTTTGC 58.796 47.619 0.00 0.00 0.00 3.68
2317 3316 2.092429 ACAGTCTCCTTGGTTTGCTTCA 60.092 45.455 0.00 0.00 0.00 3.02
2323 3322 1.133792 CCCACACAGTCTCCTTGGTTT 60.134 52.381 0.00 0.00 0.00 3.27
2337 3336 3.041940 CGGTTCAGACGCCCACAC 61.042 66.667 0.00 0.00 0.00 3.82
2345 3344 2.280797 TGTGGCAGCGGTTCAGAC 60.281 61.111 0.00 0.00 0.00 3.51
2368 3367 1.081462 TGGGGTAGGGTTGTCGGAT 59.919 57.895 0.00 0.00 0.00 4.18
2381 3380 1.703597 AGAGGGTTTTGGGTGGGGT 60.704 57.895 0.00 0.00 0.00 4.95
2382 3381 1.076727 GAGAGGGTTTTGGGTGGGG 59.923 63.158 0.00 0.00 0.00 4.96
2402 3401 0.322975 GAGAAAGCACAGAGGAGGCA 59.677 55.000 0.00 0.00 0.00 4.75
2411 3410 1.228124 CCGTTGGGGAGAAAGCACA 60.228 57.895 0.00 0.00 38.47 4.57
2449 3448 1.202580 GCTCTAGACCGGCATGAATGT 60.203 52.381 0.00 0.00 0.00 2.71
2493 3492 2.332104 CTCTTGTCAGGTCACATCACG 58.668 52.381 0.00 0.00 0.00 4.35
2495 3494 1.625315 CCCTCTTGTCAGGTCACATCA 59.375 52.381 0.00 0.00 0.00 3.07
2509 3508 1.271840 TGGATTAGCACCGCCCTCTT 61.272 55.000 0.00 0.00 0.00 2.85
2510 3509 1.689233 TGGATTAGCACCGCCCTCT 60.689 57.895 0.00 0.00 0.00 3.69
2517 3516 2.171725 GGTCGCGTGGATTAGCACC 61.172 63.158 5.77 0.00 0.00 5.01
2519 3518 1.141019 GAGGTCGCGTGGATTAGCA 59.859 57.895 5.77 0.00 0.00 3.49
2544 3543 2.099062 CTGCATTGAAGCGGCGTC 59.901 61.111 9.37 9.04 37.31 5.19
2565 3564 3.308402 GGAGATGGTTTCTTGGGATGACA 60.308 47.826 0.00 0.00 33.74 3.58
2574 3573 0.391263 GCGGTCGGAGATGGTTTCTT 60.391 55.000 0.00 0.00 40.67 2.52
2613 3612 1.010580 TCAAGCAAACAAACGCTCGA 58.989 45.000 0.00 0.00 37.54 4.04
2615 3614 2.975851 CAGATCAAGCAAACAAACGCTC 59.024 45.455 0.00 0.00 37.54 5.03
2621 3620 3.988379 GTGACCAGATCAAGCAAACAA 57.012 42.857 0.00 0.00 39.72 2.83


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.